Citrus Sinensis ID: 003452
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 819 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LIK7 | 1017 | Putative calcium-transpor | yes | no | 0.564 | 0.454 | 0.747 | 0.0 | |
| Q9LY77 | 1033 | Calcium-transporting ATPa | no | no | 0.554 | 0.439 | 0.729 | 0.0 | |
| Q9LF79 | 1074 | Calcium-transporting ATPa | no | no | 0.568 | 0.433 | 0.612 | 1e-169 | |
| Q9SZR1 | 1069 | Calcium-transporting ATPa | no | no | 0.570 | 0.436 | 0.589 | 1e-164 | |
| Q9LU41 | 1086 | Calcium-transporting ATPa | no | no | 0.565 | 0.426 | 0.577 | 1e-157 | |
| Q2RAS0 | 1017 | Probable calcium-transpor | no | no | 0.547 | 0.440 | 0.502 | 1e-127 | |
| Q2QMX9 | 1020 | Calcium-transporting ATPa | no | no | 0.547 | 0.439 | 0.497 | 1e-127 | |
| Q6ATV4 | 1033 | Calcium-transporting ATPa | no | no | 0.547 | 0.433 | 0.502 | 1e-126 | |
| Q9M2L4 | 1025 | Putative calcium-transpor | no | no | 0.544 | 0.435 | 0.492 | 1e-126 | |
| Q2QY12 | 1039 | Probable calcium-transpor | no | no | 0.547 | 0.431 | 0.5 | 1e-126 |
| >sp|Q9LIK7|ACA13_ARATH Putative calcium-transporting ATPase 13, plasma membrane-type OS=Arabidopsis thaliana GN=ACA13 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/472 (74%), Positives = 403/472 (85%), Gaps = 10/472 (2%)
Query: 351 AVLLKKTD-NTSH--VHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASS 407
VL+KK NT + VHWKGAAE ILAMCS++ D SG ++ + +++K +F++IIQ MA+
Sbjct: 551 GVLMKKKGVNTENNVVHWKGAAEKILAMCSTFCDGSGVVREMKEDDKIQFEKIIQSMAAK 610
Query: 408 SLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVN 467
SLRCIAFA+ + + +D KKL E+ L+LLG++GIKDPCRPGVKKAVEDCQ+AGVN
Sbjct: 611 SLRCIAFAYSE-------DNEDNKKLKEEKLSLLGIIGIKDPCRPGVKKAVEDCQFAGVN 663
Query: 468 IKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527
IKMITGDN+FTA+AIA ECGIL P + ++ AVLEGE+FRNYT EER+EKV++I VMARS
Sbjct: 664 IKMITGDNIFTARAIAVECGILTPEDEMNSEAVLEGEKFRNYTQEERLEKVERIKVMARS 723
Query: 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDD 587
SPFDKLLMV+CLK+ GHVVAVT DGTNDAPALKE DIGLSMGIQGTEVAKESSDIVILDD
Sbjct: 724 SPFDKLLMVKCLKELGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDD 783
Query: 588 NFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLI 647
NFASVA VL+WGRCV+ NIQK IQFQLT NVAAL+INFVAAV AG++PLTAVQLLWVNLI
Sbjct: 784 NFASVATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGDVPLTAVQLLWVNLI 843
Query: 648 MDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESI 707
MDTLGALALATEKPT +LM K P+GR PLITNIMWRNL+AQA YQ +VLL LQFRG SI
Sbjct: 844 MDTLGALALATEKPTNDLMKKKPIGRVAPLITNIMWRNLLAQAFYQISVLLVLQFRGRSI 903
Query: 708 FGVNKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMV 767
F V +KVK TLIFNTFVLCQVFNEFNAR LEKKNVF+G+HKNRLF+GII T+VLQVVMV
Sbjct: 904 FNVTEKVKNTLIFNTFVLCQVFNEFNARSLEKKNVFKGLHKNRLFIGIIVVTVVLQVVMV 963
Query: 768 EFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLKWKK 819
EFLK FADTERLN GQW CI AAASWPIGWLVK +PVP + F SYLKWKK
Sbjct: 964 EFLKRFADTERLNLGQWGVCIAIAAASWPIGWLVKSVPVPERHFFSYLKWKK 1015
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|Q9LY77|ACA12_ARATH Calcium-transporting ATPase 12, plasma membrane-type OS=Arabidopsis thaliana GN=ACA12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/462 (72%), Positives = 380/462 (82%), Gaps = 8/462 (1%)
Query: 355 KKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAF 414
+K+DNT HVHWKGAAEM+LAMCS YY ++G++ +D K R Q IIQGMA+SSLRCIAF
Sbjct: 563 RKSDNTVHVHWKGAAEMVLAMCSHYYTSTGSVDLMDSTAKSRIQAIIQGMAASSLRCIAF 622
Query: 415 AHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGD 474
AHK + L ED LTL+G+VG+KDPCRPGV KAVE C+ AGV IKMITGD
Sbjct: 623 AHKIA--------SNDSVLEEDGLTLMGIVGLKDPCRPGVSKAVETCKLAGVTIKMITGD 674
Query: 475 NVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLL 534
NVFTAKAIA ECGIL AV+EG +FRNYT EERM+KVDKI VMARSSP DKLL
Sbjct: 675 NVFTAKAIAFECGILDHNDKDEEDAVVEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLL 734
Query: 535 MVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVAR 594
MV+CL+ KGHVVAVT DGTNDAPALKE DIGLSMGIQGTEVAKESSDIVILDDNFASVA
Sbjct: 735 MVKCLRLKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVAT 794
Query: 595 VLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGAL 654
VL+WGRCV+ NIQK IQFQLT NVAAL+INF+AA+ AGE+PLTAVQLLWVNLIMDTLGAL
Sbjct: 795 VLKWGRCVYNNIQKFIQFQLTVNVAALVINFIAAISAGEVPLTAVQLLWVNLIMDTLGAL 854
Query: 655 ALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNKKV 714
ALATE+PT EL+ + PVGRTE LITN+MWRNL+ Q+LYQ AVLL LQF+G SIF V K+V
Sbjct: 855 ALATERPTNELLKRKPVGRTEALITNVMWRNLLVQSLYQIAVLLILQFKGMSIFSVRKEV 914
Query: 715 KETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFA 774
K+TLIFNTFVLCQVFNEFNAR++EKKNVF+G+H+NRLF+GII TIVLQV+MVEFLK FA
Sbjct: 915 KDTLIFNTFVLCQVFNEFNAREMEKKNVFKGLHRNRLFIGIIAITIVLQVIMVEFLKKFA 974
Query: 775 DTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLK 816
DT RLN QW CI A+ SWPIG+ K IPV PF SY K
Sbjct: 975 DTVRLNGWQWGTCIALASLSWPIGFFTKFIPVSETPFLSYFK 1016
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 594 bits (1532), Expect = e-169, Method: Compositional matrix adjust.
Identities = 291/475 (61%), Positives = 352/475 (74%), Gaps = 9/475 (1%)
Query: 351 AVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLR 410
V +K D HVHWKGA+E++LA C SY D GN+ + D++ F+ I MA +LR
Sbjct: 583 GVAVKTADGEVHVHWKGASEIVLASCRSYIDEDGNVAPMTDDKASFFKNGINDMAGRTLR 642
Query: 411 CIAFAHKQVPEEEHRNEKDQKK--LIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNI 468
C+A A + E+ ++ K L ED+L LL +VGIKDPCRPGVK +V CQ AGV +
Sbjct: 643 CVALAFRTYEAEKVPTGEELSKWVLPEDDLILLAIVGIKDPCRPGVKDSVVLCQNAGVKV 702
Query: 469 KMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528
+M+TGDNV TA+AIA ECGIL D S ++EG+ FR T ER + DKI VM RSS
Sbjct: 703 RMVTGDNVQTARAIALECGILSSDADLSEPTLIEGKSFREMTDAERDKISDKISVMGRSS 762
Query: 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588
P DKLL+VQ L+++GHVVAVT DGTNDAPAL E DIGL+MGI GTEVAKESSDI+ILDDN
Sbjct: 763 PNDKLLLVQSLRRQGHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDN 822
Query: 589 FASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIM 648
FASV +V+RWGR V+ NIQK IQFQLT NVAAL+IN VAA+ +G++PLTAVQLLWVNLIM
Sbjct: 823 FASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLTAVQLLWVNLIM 882
Query: 649 DTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIF 708
DTLGALALATE PT LM +PPVGR EPLITNIMWRNL+ QA+YQ +VLLTL FRG SI
Sbjct: 883 DTLGALALATEPPTDHLMGRPPVGRKEPLITNIMWRNLLIQAIYQVSVLLTLNFRGISIL 942
Query: 709 GVNK-------KVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIV 761
G+ +VK T+IFN FVLCQ FNEFNARK ++KN+F+G+ KNRLF+GII T+V
Sbjct: 943 GLEHEVHEHATRVKNTIIFNAFVLCQAFNEFNARKPDEKNIFKGVIKNRLFMGIIVITLV 1002
Query: 762 LQVVMVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLK 816
LQV++VEFL FA T +LNW QW C+G SWP+ + K IPVPA P S+ LK
Sbjct: 1003 LQVIIVEFLGKFASTTKLNWKQWLICVGIGVISWPLALVGKFIPVPAAPISNKLK 1057
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9SZR1|ACA10_ARATH Calcium-transporting ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=ACA10 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 578 bits (1489), Expect = e-164, Method: Compositional matrix adjust.
Identities = 284/482 (58%), Positives = 351/482 (72%), Gaps = 15/482 (3%)
Query: 351 AVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLR 410
V +K D++ H+HWKGAAE++L C+ Y D S + + +++ + I MA+ SLR
Sbjct: 586 GVAVKSPDSSVHIHWKGAAEIVLGSCTHYMDESESFVDMSEDKMGGLKDAIDDMAARSLR 645
Query: 411 CIAFAHK-----QVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAG 465
C+A A + ++P +E + + +L ED+L LL +VGIKDPCRPGVK +V CQ AG
Sbjct: 646 CVAIAFRTFEADKIPTDEE--QLSRWELPEDDLILLAIVGIKDPCRPGVKNSVLLCQQAG 703
Query: 466 VNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA 525
V ++M+TGDN+ TAKAIA ECGIL D S ++EG+ FR+Y+ EER ++I VM
Sbjct: 704 VKVRMVTGDNIQTAKAIALECGILASDSDASEPNLIEGKVFRSYSEEERDRICEEISVMG 763
Query: 526 RSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVIL 585
RSSP DKLL+VQ LK++GHVVAVT DGTNDAPAL E DIGL+MGIQGTEVAKE SDI+IL
Sbjct: 764 RSSPNDKLLLVQSLKRRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIIL 823
Query: 586 DDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVN 645
DDNF SV +V+RWGR V+ NIQK IQFQLT NVAAL+IN VAA+ AGE+PLTAVQLLWVN
Sbjct: 824 DDNFESVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISAGEVPLTAVQLLWVN 883
Query: 646 LIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGE 705
LIMDTLGALALATE PT LMD+ PVGR EPLITNIMWRNL QA+YQ VLL L FRG
Sbjct: 884 LIMDTLGALALATEPPTDHLMDRAPVGRREPLITNIMWRNLFIQAMYQVTVLLILNFRGI 943
Query: 706 SIFGVNKK-----VKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTI 760
SI + K VK T+IFN FV+CQVFNEFNARK ++ N+F G+ +N LF+GII TI
Sbjct: 944 SILHLKSKPNAERVKNTVIFNAFVICQVFNEFNARKPDEINIFRGVLRNHLFVGIISITI 1003
Query: 761 VLQVVMVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYL---KW 817
VLQVV+VEFL FA T +L+W W CIG + SWP+ + K IPVP P S Y +W
Sbjct: 1004 VLQVVIVEFLGTFASTTKLDWEMWLVCIGIGSISWPLAVIGKLIPVPETPVSQYFRINRW 1063
Query: 818 KK 819
++
Sbjct: 1064 RR 1065
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9LU41|ACA9_ARATH Calcium-transporting ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=ACA9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 557 bits (1435), Expect = e-157, Method: Compositional matrix adjust.
Identities = 276/478 (57%), Positives = 345/478 (72%), Gaps = 15/478 (3%)
Query: 351 AVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLR 410
V + + D+ +HWKGAAE++LA C+ Y D++G ++ ++ ++KE F+ I MA +SLR
Sbjct: 600 GVAVLRGDSEVFIHWKGAAEIVLACCTQYMDSNGTLQSIE-SQKEFFRVAIDSMAKNSLR 658
Query: 411 CIAFAHK-----QVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAG 465
C+A A + QVP+E+ + D+ L ED L LL +VGIKDPCRPGV++AV C AG
Sbjct: 659 CVAIACRTQELNQVPKEQE--DLDKWALPEDELILLAIVGIKDPCRPGVREAVRICTSAG 716
Query: 466 VNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA 525
V ++M+TGDN+ TAKAIA ECGIL + ++EG+ FR + +ER + KI VM
Sbjct: 717 VKVRMVTGDNLQTAKAIALECGILSSDTEAVEPTIIEGKVFRELSEKEREQVAKKITVMG 776
Query: 526 RSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVIL 585
RSSP DKLL+VQ L++ G VVAVT DGTNDAPAL E DIGLSMGI GTEVAKESSDI+IL
Sbjct: 777 RSSPNDKLLLVQALRKNGDVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIIL 836
Query: 586 DDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVN 645
DDNFASV +V+RWGR V+ NIQK IQFQLT NVAAL+IN VAA+ +G++PL AVQLLWVN
Sbjct: 837 DDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAMSSGDVPLKAVQLLWVN 896
Query: 646 LIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGE 705
LIMDTLGALALATE PT LM + PVGR EPLITNIMWRNL+ Q+ YQ AVLL L F G
Sbjct: 897 LIMDTLGALALATEPPTDHLMHRTPVGRREPLITNIMWRNLLVQSFYQVAVLLVLNFAGL 956
Query: 706 SIFGVNK-------KVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGT 758
SI G+N +VK T+IFN FV+CQ+FNEFNARK ++ NVF G++KN LF+ I+G
Sbjct: 957 SILGLNHENHAHAVEVKNTMIFNAFVMCQIFNEFNARKPDEMNVFRGVNKNPLFVAIVGV 1016
Query: 759 TIVLQVVMVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLK 816
T +LQ+++V FL FA T RL W W A I SWP+ + K IPVP P S Y K
Sbjct: 1017 TFILQIIIVTFLGKFAHTVRLGWQLWLASIIIGLVSWPLAIVGKLIPVPKTPMSVYFK 1074
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/462 (50%), Positives = 302/462 (65%), Gaps = 14/462 (3%)
Query: 350 LAVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSL 409
+AVL+ TS KGA+E+IL MC D GN L + +++ I AS +L
Sbjct: 543 MAVLISLPSGTSRWFCKGASEIILQMCDMMVDGDGNAIPLSEAQRKNILDTINSFASDAL 602
Query: 410 RCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIK 469
R + A+K+V ++ N TL+ + GIKDP RPGVK AV+ C AG+ ++
Sbjct: 603 RTLCLAYKEVDDDIDDNADSPTS----GFTLIAIFGIKDPVRPGVKDAVKTCMSAGITVR 658
Query: 470 MITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSP 529
M+TGDN+ TAKAIA ECGIL T G +EG EF + + EE + + I VMARS P
Sbjct: 659 MVTGDNINTAKAIAKECGIL-----TEDGVAIEGPEFHSKSPEEMRDLIPNIQVMARSLP 713
Query: 530 FDKLLMVQCLKQK-GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588
DK +V L+ VV+VT DGTNDAPAL E DIGL+MGI GTEVAKES+D+++LDDN
Sbjct: 714 LDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIVLDDN 773
Query: 589 FASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIM 648
F ++ V RWGR V+ NIQK +QFQLT N+ AL+INFV+A G PLTAVQLLWVN+IM
Sbjct: 774 FTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACITGSAPLTAVQLLWVNMIM 833
Query: 649 DTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIF 708
DTLGALALATE P E+M +PPV + E IT +MWRN++ Q+LYQ VL L F GES+
Sbjct: 834 DTLGALALATEPPNDEMMKRPPVRKGESFITKVMWRNIMGQSLYQLFVLGALMFGGESLL 893
Query: 709 GV----NKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQV 764
+ +K + TLIFN+FV CQVFNE N+R+++K NVF GI N +F+ +I T+ QV
Sbjct: 894 NIKGADSKSIINTLIFNSFVFCQVFNEINSREMQKINVFRGIISNWIFIAVIAATVAFQV 953
Query: 765 VMVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPV 806
V++EFL FA T LNW W +G + S +G ++KCIPV
Sbjct: 954 VIIEFLGTFASTVPLNWQHWLLSVGLGSISLIVGVILKCIPV 995
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/462 (49%), Positives = 316/462 (68%), Gaps = 14/462 (3%)
Query: 350 LAVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSL 409
+ V+LK H KGA+E++LA C + D +G + LD ++ II+ A+ +L
Sbjct: 565 MCVVLKLPGGGCRAHCKGASEIVLAACDKFMDETGAVVPLDKTTADKLNGIIESFANEAL 624
Query: 410 RCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIK 469
R + ++++ EE + ++Q L T +G+VGIKDP RPGV+++V C+ AG+ ++
Sbjct: 625 RTLCLGYREM--EEGFSVEEQIPL--QGYTCIGIVGIKDPVRPGVRESVATCRSAGIMVR 680
Query: 470 MITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSP 529
M+TGDN+ TAKAIA ECGIL T G +EG EFR + +E ++ + KI VMARSSP
Sbjct: 681 MVTGDNINTAKAIARECGIL-----TEDGLAIEGPEFREKSLDELLKLIPKIQVMARSSP 735
Query: 530 FDKLLMVQCLKQK-GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588
DK +V+ L+ VVAVT DGTNDAPAL E DIGL+MGI GTEVAKES+D++ILDDN
Sbjct: 736 LDKHTLVKHLRTTFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795
Query: 589 FASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIM 648
F+++ V +WGR V+ NIQK +QFQLT NV ALL+NF +A + G PLTAVQLLWVN+IM
Sbjct: 796 FSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFSSACFTGNAPLTAVQLLWVNMIM 855
Query: 649 DTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIF 708
DTLGALALATE P +LM + PVGRT ITN+MWRN++ Q+ YQ V+ LQ +G+S+F
Sbjct: 856 DTLGALALATEPPNDDLMKREPVGRTGKFITNVMWRNILGQSFYQFIVMWYLQTQGKSMF 915
Query: 709 GVN----KKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQV 764
G++ + V T+IFN+FV CQVFNE ++R++EK NV GI KN +FLG++ +T+V Q
Sbjct: 916 GLDGPDAEVVLNTIIFNSFVFCQVFNEISSREMEKINVLRGILKNYVFLGVLTSTVVFQF 975
Query: 765 VMVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPV 806
+MV+FL FA+T L QW A + PI ++K +PV
Sbjct: 976 IMVQFLGEFANTIPLTRLQWIASVLLGLIGMPISAIIKLLPV 1017
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q6ATV4|ACA2_ORYSJ Calcium-transporting ATPase 2, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os03g0616400 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/462 (50%), Positives = 310/462 (67%), Gaps = 14/462 (3%)
Query: 350 LAVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSL 409
++ +L+ H KGA+E++LA C + D G I LDD + II+ +S +L
Sbjct: 569 MSTILELPGGGYRAHCKGASEIVLAACDKFIDERGCIVPLDDKTSSKLNDIIKAFSSEAL 628
Query: 410 RCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIK 469
R + A++++ EE + ++Q L T +G+VGIKDP RPGV+++V C+ AG++++
Sbjct: 629 RTLCLAYREM--EEGFSTQEQIPL--QGYTCIGIVGIKDPVRPGVRQSVATCRSAGISVR 684
Query: 470 MITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSP 529
MITGDN+ TAKAIA ECGIL T G +EG EFR + EE + + K+ V+ARSSP
Sbjct: 685 MITGDNIDTAKAIARECGIL-----TKDGIAIEGAEFREKSAEELHDLIPKMQVLARSSP 739
Query: 530 FDKLLMVQCLKQK-GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588
DK +V+ L+ VVAVT DGTNDAPAL+E DIGL+MGI GTEVAKES+D+VILDDN
Sbjct: 740 LDKHTLVKHLRTAFNEVVAVTGDGTNDAPALREADIGLAMGIAGTEVAKESADVVILDDN 799
Query: 589 FASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIM 648
F+++ V +WGR V+ NIQK +QFQLT NV ALL+NF +A + G+ PLTAVQLLWVN+IM
Sbjct: 800 FSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFTSACFTGDAPLTAVQLLWVNMIM 859
Query: 649 DTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIF 708
DTLGALALATE P LM K PVGR ITN+MWRN+V Q+LYQ AV+ LQ +G+ +F
Sbjct: 860 DTLGALALATEPPNNNLMKKAPVGRKGKFITNVMWRNIVGQSLYQFAVMWYLQTQGKHLF 919
Query: 709 GVNKK----VKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQV 764
G+ V T+IFNTFV CQVFNE ++R++E NV G+ N +FLG++ TI Q
Sbjct: 920 GLEGYHADIVLNTIIFNTFVFCQVFNEISSREMEDINVLRGMAGNSIFLGVLTGTIFFQF 979
Query: 765 VMVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPV 806
++V+FL +FA+T L QW I F PI +K I V
Sbjct: 980 ILVQFLGDFANTTPLTQQQWLISILFGFLGMPIAAAIKLIAV 1021
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/461 (49%), Positives = 302/461 (65%), Gaps = 15/461 (3%)
Query: 350 LAVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSL 409
++VL + KGA+E++L MC D++G L + + +I+G AS +L
Sbjct: 556 MSVLTSHSGGKVRAFCKGASEIVLKMCEKVVDSNGESVPLSEEKIASISDVIEGFASEAL 615
Query: 410 RCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIK 469
R + + + +E + L TL+ +VGIKDP RPGV++AV+ CQ AG+ ++
Sbjct: 616 RTLCLVYTDL------DEAPRGDLPNGGYTLVAVVGIKDPVRPGVREAVQTCQAAGITVR 669
Query: 470 MITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSP 529
M+TGDN+ TAKAIA ECGIL G G +EG +FRN E + KI VMARS P
Sbjct: 670 MVTGDNISTAKAIAKECGILTAG-----GVAIEGSDFRNLPPHEMRAILPKIQVMARSLP 724
Query: 530 FDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNF 589
DK +V L++ G VVAVT DGTNDAPAL E DIGL+MGI GTEVAKE++D++I+DDNF
Sbjct: 725 LDKHTLVNNLRKMGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNF 784
Query: 590 ASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMD 649
A++ V +WGR V+ NIQK +QFQLT NV AL+INFV+A G PLTAVQLLWVN+IMD
Sbjct: 785 ATIVNVAKWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMD 844
Query: 650 TLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFG 709
TLGALALATE P + LM + P+GRT IT MWRN++ Q++YQ VL L F G+ I
Sbjct: 845 TLGALALATEPPNEGLMKRQPIGRTASFITRAMWRNIIGQSIYQLIVLGILNFAGKQILN 904
Query: 710 VNKK----VKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVV 765
+N V T+IFN+FV CQVFNE N+R++EK NVFEG+ K+ +F+ ++ T+ QV+
Sbjct: 905 LNGPDSTIVLNTIIFNSFVFCQVFNEVNSREIEKINVFEGMFKSWVFVAVMTATVGFQVI 964
Query: 766 MVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPV 806
+VEFL FA T L+W W CI + S + +KCIPV
Sbjct: 965 IVEFLGAFASTVPLSWQHWLLCILIGSVSMILAVGLKCIPV 1005
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/462 (50%), Positives = 301/462 (65%), Gaps = 14/462 (3%)
Query: 350 LAVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSL 409
+AVL+ + TS KGA+E+IL MC D GN L + +++ I AS +L
Sbjct: 565 MAVLISLPNGTSRWFCKGASEIILQMCDMMVDGDGNAIPLSEAQRKNILDTINSFASDAL 624
Query: 410 RCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIK 469
R + A+K+V ++ N TL+ + GIKDP RPGVK AV+ C AG+ ++
Sbjct: 625 RTLCLAYKEVDDDIDDNADSPTS----GFTLIAIFGIKDPVRPGVKDAVKTCMSAGITVR 680
Query: 470 MITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSP 529
M+TGDN+ TAKAIA ECGIL T G +EG EF + + EE + + I VMARS P
Sbjct: 681 MVTGDNINTAKAIAKECGIL-----TEDGVAIEGPEFHSKSTEEMRDLILNIQVMARSLP 735
Query: 530 FDKLLMVQCLKQK-GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588
DK +V L+ VV+VT DGTNDAPAL E DIGL+MGI GTEVAKES+D+++LDDN
Sbjct: 736 LDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIVLDDN 795
Query: 589 FASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIM 648
F ++ V RWGR V+ NIQK +QFQLT N+ AL+INFV+A G PLTAVQLLWVN+IM
Sbjct: 796 FTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFVSACIIGSAPLTAVQLLWVNMIM 855
Query: 649 DTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIF 708
DTLGALALATE P E+M +PPV + E IT MWRN++ Q+LYQ VL L F GE +
Sbjct: 856 DTLGALALATEPPNDEMMKRPPVRKGESFITKFMWRNIMGQSLYQLFVLGALMFGGERLL 915
Query: 709 GV----NKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQV 764
+ +K + TLIFN+FV CQVFNE N+R+++K NVF GI N +F+ +I T+ QV
Sbjct: 916 NIKGADSKSIINTLIFNSFVFCQVFNEINSREMQKINVFRGIISNWIFIAVIAATVAFQV 975
Query: 765 VMVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPV 806
V++EFL FA T LNW W +G + S +G ++KCIPV
Sbjct: 976 VIIEFLGTFASTVPLNWQHWLLSVGLGSISLIVGVILKCIPV 1017
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 819 | ||||||
| 297737124 | 3100 | unnamed protein product [Vitis vinifera] | 0.824 | 0.217 | 0.580 | 0.0 | |
| 225432828 | 1011 | PREDICTED: putative calcium-transporting | 0.565 | 0.457 | 0.834 | 0.0 | |
| 224102125 | 984 | autoinhibited calcium ATPase [Populus tr | 0.527 | 0.439 | 0.824 | 0.0 | |
| 255552023 | 1013 | cation-transporting atpase plant, putati | 0.564 | 0.456 | 0.832 | 0.0 | |
| 225432830 | 1011 | PREDICTED: putative calcium-transporting | 0.565 | 0.457 | 0.834 | 0.0 | |
| 224107941 | 998 | autoinhibited calcium ATPase [Populus tr | 0.549 | 0.450 | 0.819 | 0.0 | |
| 225432816 | 1017 | PREDICTED: putative calcium-transporting | 0.562 | 0.453 | 0.832 | 0.0 | |
| 225432840 | 1012 | PREDICTED: putative calcium-transporting | 0.560 | 0.453 | 0.835 | 0.0 | |
| 225432838 | 1012 | PREDICTED: putative calcium-transporting | 0.560 | 0.453 | 0.831 | 0.0 | |
| 359477570 | 1009 | PREDICTED: putative calcium-transporting | 0.565 | 0.458 | 0.798 | 0.0 |
| >gi|297737124|emb|CBI26325.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/866 (58%), Positives = 572/866 (66%), Gaps = 191/866 (22%)
Query: 1 MSTIFHANAVSIESLLNFPATLNVPTKKWHSAFTKIYCSRTLLSLAEIA---KAKKGVNK 57
MS + V +ESLL P+TL+ P K+WH AF IYCSR L SL K+
Sbjct: 2344 MSNNLDLSLVCMESLLEVPSTLSKPKKRWHLAFATIYCSRALYSLLNHPVSNNKKRSKTL 2403
Query: 58 ASRSPSYTVVNLQHDDESFKIDQTSLVELVKMKDLDKLHEFGGIRGVASALETDFDAGIF 117
+ PS+ ++N++ DQ SL ++VK K L +L E GG+ GVA LETD GI
Sbjct: 2404 LTSPPSFVILNVEPQHGFSNFDQHSLTQIVKHKSLTQLLELGGVEGVAIILETDVKNGIH 2463
Query: 118 GNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLK 177
G +D+ RR +AF SN Y+KPP+KS FYF G K
Sbjct: 2464 GAVEDVTRRRKAFGSNAYRKPPTKSFFYF---------------------------QGPK 2496
Query: 178 EGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIV 237
EGWY+GGSILVA+ SKVS+NIQ+DV+R+GRRQQISIFE+V
Sbjct: 2497 EGWYDGGSILVAL---------------------SKVSDNIQVDVVRDGRRQQISIFEVV 2535
Query: 238 VGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYA 297
VGDV+CLKIGDQVPA+GLFLDGHSLQVDESSMTGESDHVEVN+S NPFLFSGTKVADGYA
Sbjct: 2536 VGDVVCLKIGDQVPADGLFLDGHSLQVDESSMTGESDHVEVNTSLNPFLFSGTKVADGYA 2595
Query: 298 RMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLA------------- 344
RM+ TSVGMNTTWG+MMS ISRD +EQTPLQARLNKLTSS GK+GLA
Sbjct: 2596 RMVVTSVGMNTTWGEMMSTISRDTNEQTPLQARLNKLTSSIGKVGLAFHGNLTKADDVVN 2655
Query: 345 --VAFLVLAVLLK--------------------------KTDNTSHV-----------HW 365
V + +AV ++ + D +S +
Sbjct: 2656 AVVRIIAVAVTIRMMAEQAMVRRLSACETMGSATTIYPIREDASSSIATNFSGKAFNSEK 2715
Query: 366 KGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR 425
K AEMILAMCS+YYDASG+++ LD E+ F+QIIQ
Sbjct: 2716 KRTAEMILAMCSTYYDASGSMRDLDHVERTTFEQIIQA---------------------- 2753
Query: 426 NEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE 485
+KL ED+LTL+GLVGIKDPCR GV+KAVEDCQYAGVN+KMIT
Sbjct: 2754 ----TQKLKEDSLTLIGLVGIKDPCRAGVRKAVEDCQYAGVNVKMIT------------- 2796
Query: 486 CGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHV 545
ERMEKVDKI VMARSSP DKLLMVQCLKQKGHV
Sbjct: 2797 ---------------------------ERMEKVDKIRVMARSSPLDKLLMVQCLKQKGHV 2829
Query: 546 VAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTN 605
VAVT DG NDAPALK DIGLSMGIQGTEVAKESSDI+ILDDNFASVA VLRWGRCV+ N
Sbjct: 2830 VAVTGDGANDAPALKAADIGLSMGIQGTEVAKESSDIIILDDNFASVATVLRWGRCVYNN 2889
Query: 606 IQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKEL 665
IQK IQFQLT NVAAL+INFVAAV AGE+PLTAVQLLWVNLIMDTLGALALATE+PTKEL
Sbjct: 2890 IQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEQPTKEL 2949
Query: 666 MDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNKKVKETLIFNTFVL 725
M+KPP+GRTEPLI+NIMWRNL+AQALYQ AVLLTLQF+GESIFGV++KVK+TLIFNTFVL
Sbjct: 2950 MEKPPMGRTEPLISNIMWRNLLAQALYQIAVLLTLQFKGESIFGVSEKVKDTLIFNTFVL 3009
Query: 726 CQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFADTERLNWGQWS 785
CQVFNEFNARKLEKKN VVMVEFLK FADTERL+WGQW
Sbjct: 3010 CQVFNEFNARKLEKKN----------------------VVMVEFLKKFADTERLDWGQWG 3047
Query: 786 ACIGFAAASWPIGWLVKCIPVPAKPF 811
ACIG AAASWPIGW+VKC+PV KPF
Sbjct: 3048 ACIGIAAASWPIGWVVKCVPVSDKPF 3073
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432828|ref|XP_002279593.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/466 (83%), Positives = 427/466 (91%)
Query: 352 VLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRC 411
++ KK DN HVHWKGAAEMILAMCSSYYDASG++K LDD E+ F+QIIQGMA+SSLRC
Sbjct: 546 LMRKKADNKMHVHWKGAAEMILAMCSSYYDASGSMKDLDDAERMTFEQIIQGMAASSLRC 605
Query: 412 IAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMI 471
IAFAHKQ+PEEE + ++L ED+LTL+GLVGIKDPCRPGV+KAVEDCQYAGVN+KMI
Sbjct: 606 IAFAHKQIPEEEQEISEGCQRLTEDSLTLIGLVGIKDPCRPGVRKAVEDCQYAGVNVKMI 665
Query: 472 TGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFD 531
TGDNVFTA+AIATECGIL+P +D ++ AV+EGE FR YT EERMEKVDKICVMARSSPFD
Sbjct: 666 TGDNVFTARAIATECGILRPDRDMNSEAVVEGEVFRKYTPEERMEKVDKICVMARSSPFD 725
Query: 532 KLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFAS 591
KLLMVQCLK KGHVVAVT DGTNDAPALKE DIGLSMGIQGTEVAKESSDI+ILDDNFAS
Sbjct: 726 KLLMVQCLKLKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFAS 785
Query: 592 VARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTL 651
VA VLRWGRCV+ NIQK IQFQLT NVAAL+INFVAAV AGE+PLTAVQLLWVNLIMDTL
Sbjct: 786 VATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTL 845
Query: 652 GALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVN 711
GALALATE+PT+ELM+KPPVGRTEPLI+NIMWRN++AQALYQ AVLLTLQFRGESIFGV+
Sbjct: 846 GALALATEQPTRELMEKPPVGRTEPLISNIMWRNILAQALYQIAVLLTLQFRGESIFGVS 905
Query: 712 KKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLK 771
+KVK TLIFNTFVLCQVFNEFNARKLEKKNVF+G+HKN+LFLGIIG TI+LQVVMVEFLK
Sbjct: 906 EKVKNTLIFNTFVLCQVFNEFNARKLEKKNVFKGLHKNKLFLGIIGMTIILQVVMVEFLK 965
Query: 772 NFADTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLKW 817
FADTERLNWGQW ACIG AAASWPIGW+VK IPV KPF SYLKW
Sbjct: 966 KFADTERLNWGQWGACIGIAAASWPIGWVVKGIPVSDKPFLSYLKW 1011
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224102125|ref|XP_002312557.1| autoinhibited calcium ATPase [Populus trichocarpa] gi|222852377|gb|EEE89924.1| autoinhibited calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/466 (82%), Positives = 424/466 (90%)
Query: 354 LKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIA 413
+KK D+T HVHWKGAAEMILAMCSSYYDASG +K +DD E+ F+QIIQ MA+SSLRCIA
Sbjct: 519 MKKMDHTIHVHWKGAAEMILAMCSSYYDASGLMKEMDDRERNTFKQIIQDMAASSLRCIA 578
Query: 414 FAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITG 473
FAHKQ+ E+++ + K+ K L ED LTLLGLVGIKDPCRPGVKKAV+DCQ AGVN+KMITG
Sbjct: 579 FAHKQISEDQYEDGKEDKTLKEDCLTLLGLVGIKDPCRPGVKKAVDDCQRAGVNVKMITG 638
Query: 474 DNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKL 533
DNVFTA+AIA ECGILKPG + +GAV+EGEEFRNYTHE+RMEKVDKICVMARSSPFDKL
Sbjct: 639 DNVFTARAIAIECGILKPGAENISGAVVEGEEFRNYTHEQRMEKVDKICVMARSSPFDKL 698
Query: 534 LMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVA 593
LMVQCLKQKGHVVAVT DGTNDAPALKE DIGLSMGIQGTEVAKESSDIVILDDNFASVA
Sbjct: 699 LMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVA 758
Query: 594 RVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGA 653
VLRWGRCV+ NIQK IQFQLT NVAAL+INFVAAV AGE+PLTAVQLLWVNLIMDTLGA
Sbjct: 759 TVLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGA 818
Query: 654 LALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNKK 713
LALATE+PT+ELM+K PVGRTEPLITNIMWRNL++QALYQ A+LLTLQF+GESIFGV ++
Sbjct: 819 LALATEQPTQELMEKTPVGRTEPLITNIMWRNLLSQALYQIAILLTLQFKGESIFGVTER 878
Query: 714 VKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNF 773
V +TLIFN FVLCQVFNEFNARKLE+KNVF+GIHKN+LFLGIIG TI+LQV+MVEFLK F
Sbjct: 879 VNDTLIFNIFVLCQVFNEFNARKLEEKNVFKGIHKNKLFLGIIGITILLQVLMVEFLKKF 938
Query: 774 ADTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLKWKK 819
ADTERLNWGQW ACIG AA SWPI W+VKCIPVP KP SYL W+K
Sbjct: 939 ADTERLNWGQWGACIGTAALSWPICWVVKCIPVPEKPIFSYLTWRK 984
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255552023|ref|XP_002517056.1| cation-transporting atpase plant, putative [Ricinus communis] gi|223543691|gb|EEF45219.1| cation-transporting atpase plant, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/465 (83%), Positives = 419/465 (90%)
Query: 355 KKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAF 414
KK D+T HV WKGAAEMILAMC+SYYDA G +K LDDNE+ F+QIIQ MA+ SLRCIAF
Sbjct: 549 KKLDSTIHVQWKGAAEMILAMCTSYYDACGIVKELDDNERTVFKQIIQEMAAESLRCIAF 608
Query: 415 AHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGD 474
AH Q+ EE++ KKL E+ LTLLGLVGIKDPCRPGVKKAVEDCQ+AGV+IKMITGD
Sbjct: 609 AHAQISEEQYEAGIQDKKLKENGLTLLGLVGIKDPCRPGVKKAVEDCQHAGVSIKMITGD 668
Query: 475 NVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLL 534
NVFTA+AIA ECGILKPGQD +GAV+EGEEFRNYTHEERMEKVD+ICVMARSSPFDKLL
Sbjct: 669 NVFTARAIALECGILKPGQDMFSGAVVEGEEFRNYTHEERMEKVDQICVMARSSPFDKLL 728
Query: 535 MVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVAR 594
MVQCLKQKG VVAVT DGTNDAPALKE DIGLSMGIQGTEVAKESSDIVILDDNFASVA
Sbjct: 729 MVQCLKQKGQVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVAT 788
Query: 595 VLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGAL 654
VLRWGRCV+ NIQK IQFQLT NVAAL+INFVAAV AGE+PLTAVQLLWVNLIMDTLGAL
Sbjct: 789 VLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGAL 848
Query: 655 ALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNKKV 714
ALATE+PTKELMDK PVGRTEPLITNIMW+NL+AQA YQ AVLLTLQF+G+SIFGV ++V
Sbjct: 849 ALATEQPTKELMDKKPVGRTEPLITNIMWKNLLAQAFYQIAVLLTLQFKGKSIFGVTEEV 908
Query: 715 KETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFA 774
K+TLIFNTFVLCQVFNEFNARKLEKKNVF+GIHKN+LFLGIIG TIVLQV+MVEFLK FA
Sbjct: 909 KDTLIFNTFVLCQVFNEFNARKLEKKNVFKGIHKNKLFLGIIGVTIVLQVLMVEFLKKFA 968
Query: 775 DTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLKWKK 819
DTERLNWGQW ACIG A +WPIGWLVK IPVP KP SYL W+K
Sbjct: 969 DTERLNWGQWGACIGMATLTWPIGWLVKFIPVPEKPILSYLTWRK 1013
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432830|ref|XP_002279629.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/466 (83%), Positives = 430/466 (92%)
Query: 352 VLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRC 411
++ KK DN HVHWKGAAEMILAMCSSYYDASG++K LDD E+ F+QIIQGMA+SSLRC
Sbjct: 546 LMRKKADNKIHVHWKGAAEMILAMCSSYYDASGSMKELDDGERMTFEQIIQGMAASSLRC 605
Query: 412 IAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMI 471
IAFAHKQ+PEEE + ++KL ED+LTL+GLVGIKDPCRPGV+KAVEDCQYAGVN+KMI
Sbjct: 606 IAFAHKQIPEEEQEIREGRQKLKEDSLTLIGLVGIKDPCRPGVRKAVEDCQYAGVNVKMI 665
Query: 472 TGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFD 531
TGDNVFTA+AIATECGIL+P QD ++ AV+EGE FR YT EERMEKVDKICVMARSSPFD
Sbjct: 666 TGDNVFTARAIATECGILRPDQDINSEAVVEGEVFRKYTSEERMEKVDKICVMARSSPFD 725
Query: 532 KLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFAS 591
KLLMVQCLKQKGHVVAVT DGTNDAPALKE DIGLSMGIQGTEVAKESSDI+ILDDNFAS
Sbjct: 726 KLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFAS 785
Query: 592 VARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTL 651
VA VLRWGRCV+ NIQK IQFQLT NVAAL+INFVAAV AGE+PLTAVQLLWVNLIMDTL
Sbjct: 786 VATVLRWGRCVYDNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTL 845
Query: 652 GALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVN 711
GALALATE+PTKELM+KPPVGR EPLI+N+MWRNL+AQALYQ A+LLTLQF+G+SIFGV+
Sbjct: 846 GALALATEQPTKELMEKPPVGRKEPLISNVMWRNLLAQALYQIAILLTLQFKGQSIFGVS 905
Query: 712 KKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLK 771
+KVK+TLIFNTFVLCQVFNEFNARKLEKKNVF+G+HKN+LFLGIIG TI+LQVVMVEFLK
Sbjct: 906 EKVKDTLIFNTFVLCQVFNEFNARKLEKKNVFKGLHKNKLFLGIIGITIILQVVMVEFLK 965
Query: 772 NFADTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLKW 817
FADTERL+WGQW ACIG AAASWPIGW+VKCIPV KPF SYLKW
Sbjct: 966 KFADTERLDWGQWGACIGIAAASWPIGWVVKCIPVSDKPFLSYLKW 1011
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224107941|ref|XP_002314662.1| autoinhibited calcium ATPase [Populus trichocarpa] gi|222863702|gb|EEF00833.1| autoinhibited calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 809 bits (2089), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/465 (81%), Positives = 422/465 (90%)
Query: 355 KKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAF 414
KK DNT HVHWKGAAEMILAMCSSYYDASG +K +D E+ F+QIIQ MA++SLRCIAF
Sbjct: 534 KKVDNTIHVHWKGAAEMILAMCSSYYDASGLMKDMDVGERNTFKQIIQVMAANSLRCIAF 593
Query: 415 AHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGD 474
AHKQ+ EE++ + K++K+L ED+ TLLGL+GIKDP RPGVKKAVEDCQ+AGVNIKMITGD
Sbjct: 594 AHKQLSEEQYEDGKEEKRLQEDSFTLLGLLGIKDPIRPGVKKAVEDCQHAGVNIKMITGD 653
Query: 475 NVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLL 534
NVFTA+AIA ECGIL+ G + GAV+EGEEFRNYTHE+RMEKVDKICVMARSSPFDKLL
Sbjct: 654 NVFTARAIAIECGILEYGAENINGAVVEGEEFRNYTHEQRMEKVDKICVMARSSPFDKLL 713
Query: 535 MVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVAR 594
MVQCLKQKGHVVAVT DGTNDAPALKE DIGLSMGIQGTEVAKESSDIVILDDNFASVA
Sbjct: 714 MVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVAT 773
Query: 595 VLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGAL 654
VLRWGRCV++NIQK IQFQLT NVAAL+INFVAAV AGE+PLTAVQLLWVNLIMDTLGAL
Sbjct: 774 VLRWGRCVYSNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGAL 833
Query: 655 ALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNKKV 714
ALATE+PT+ELM K PVGRTEPLITNIMWRNL++QALYQ A+LLTLQF+GE IFG+ ++V
Sbjct: 834 ALATEQPTQELMKKTPVGRTEPLITNIMWRNLLSQALYQIAILLTLQFKGEPIFGLTERV 893
Query: 715 KETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFA 774
+TLIFN FVLCQVFNEFNARKLE+KNVF+GIHKN+LFLGIIG TI+LQV+MVEFLK FA
Sbjct: 894 NDTLIFNIFVLCQVFNEFNARKLEEKNVFKGIHKNKLFLGIIGITILLQVLMVEFLKKFA 953
Query: 775 DTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLKWKK 819
DTERLNWGQW ACIG AA SWPIGW+VKCIPVP KP SYL WKK
Sbjct: 954 DTERLNWGQWGACIGIAALSWPIGWVVKCIPVPEKPIFSYLTWKK 998
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432816|ref|XP_002283579.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/466 (83%), Positives = 423/466 (90%)
Query: 352 VLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRC 411
++ KK DNT HVHWKGAAEMILAMCSSYYD SG++K +DD E+ F+QIIQGMA+SSLRC
Sbjct: 552 LIRKKADNTIHVHWKGAAEMILAMCSSYYDVSGSMKDMDDGERMIFEQIIQGMAASSLRC 611
Query: 412 IAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMI 471
IA AHKQ+PEEEH + +KL ED+LTL+ LVGIKDPCRPGV+KAVEDCQYAGVN+KMI
Sbjct: 612 IALAHKQIPEEEHEIGEGPQKLKEDSLTLIALVGIKDPCRPGVRKAVEDCQYAGVNVKMI 671
Query: 472 TGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFD 531
TGDN+FTA+AIATECGIL+PGQ+ ++ AV+EGE FR YT EERMEKVDKI VMARSSPFD
Sbjct: 672 TGDNIFTARAIATECGILRPGQEMNSEAVVEGEVFRQYTQEERMEKVDKIHVMARSSPFD 731
Query: 532 KLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFAS 591
KLLMVQCLKQKGHVVAVT DGTNDAPALKE DIGLSMGIQGTEVAKESSDI+ILDDNFAS
Sbjct: 732 KLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFAS 791
Query: 592 VARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTL 651
VA VLRWGRCV+ NIQK IQFQLT NVAAL+INFVAA AGE+PLTAVQLLWVNLIMDTL
Sbjct: 792 VATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAASAGEVPLTAVQLLWVNLIMDTL 851
Query: 652 GALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVN 711
GALALATE+PTKELM+KPPVGR EPLITNIMWRNL+AQALYQ VLLTLQF GESIFGVN
Sbjct: 852 GALALATERPTKELMEKPPVGRAEPLITNIMWRNLLAQALYQIVVLLTLQFNGESIFGVN 911
Query: 712 KKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLK 771
+KVK+TLIFNTFVLCQVFNEFNAR+LEKKNVFEGIHKN+LFLGIIG TI+LQVVMVEFLK
Sbjct: 912 QKVKDTLIFNTFVLCQVFNEFNARELEKKNVFEGIHKNKLFLGIIGITIILQVVMVEFLK 971
Query: 772 NFADTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLKW 817
FADTERL+WGQW ACIG AAASWPIGWLVKCIPV KP YLKW
Sbjct: 972 KFADTERLDWGQWGACIGVAAASWPIGWLVKCIPVSDKPVLDYLKW 1017
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432840|ref|XP_002279888.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/462 (83%), Positives = 420/462 (90%)
Query: 356 KTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFA 415
K D+T +VHWKGAAEMILAMCSSYYDASG+ K +DD E+ F+QIIQGMA+SSLRCIAFA
Sbjct: 551 KADDTINVHWKGAAEMILAMCSSYYDASGSTKDMDDGERMTFEQIIQGMAASSLRCIAFA 610
Query: 416 HKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDN 475
HKQ+PEE+H + +KL ED LTL+GLVGIKDPCRPGV+KAVEDCQYAGVN+KMITGDN
Sbjct: 611 HKQIPEEKHEIREATQKLKEDGLTLIGLVGIKDPCRPGVRKAVEDCQYAGVNVKMITGDN 670
Query: 476 VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLM 535
VFTA+AIATECGIL+P Q AV+EGE FR YT EERMEKVDKI VMARSSPFDKLLM
Sbjct: 671 VFTARAIATECGILRPDQGIDNEAVVEGEVFRKYTPEERMEKVDKIRVMARSSPFDKLLM 730
Query: 536 VQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARV 595
VQCLKQKGHVVAVT DGTNDAPALKE DIGLSMGIQGTEVAK+SSDI+ILDDNFASVA V
Sbjct: 731 VQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKQSSDIIILDDNFASVATV 790
Query: 596 LRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALA 655
LRWGRCV+ NIQK IQFQLT NVAAL+INFVAAV AGE+PLTAVQLLWVNLIMDTLGALA
Sbjct: 791 LRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALA 850
Query: 656 LATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNKKVK 715
L+TE+PTK LMD+PPVGRTEPLITNIMWRNL+AQALYQ AVLLTLQF+GESIFGVN+KVK
Sbjct: 851 LSTEQPTKGLMDRPPVGRTEPLITNIMWRNLLAQALYQIAVLLTLQFKGESIFGVNEKVK 910
Query: 716 ETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFAD 775
+TLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKN+LFLGIIG TI+LQVVMVEFLK FAD
Sbjct: 911 DTLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNKLFLGIIGITIILQVVMVEFLKKFAD 970
Query: 776 TERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLKW 817
TERLNWGQW AC+G AA SWP+GW+VKCI V KPF SYLKW
Sbjct: 971 TERLNWGQWGACLGIAAVSWPLGWVVKCIHVSNKPFLSYLKW 1012
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432838|ref|XP_002279864.1| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/462 (83%), Positives = 420/462 (90%)
Query: 356 KTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFA 415
K DNT HVHWKGAAEMILAMCSSYYDASG++K LDD E++ F+QIIQGMA+SSLRCIAFA
Sbjct: 551 KADNTIHVHWKGAAEMILAMCSSYYDASGSMKDLDDCERKTFEQIIQGMAASSLRCIAFA 610
Query: 416 HKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDN 475
HKQ+ EEEH + +KL ED L +GLVGIKDPCRPGV+KAVEDCQ+AGVN+KMITGDN
Sbjct: 611 HKQILEEEHEIREATQKLKEDGLAFVGLVGIKDPCRPGVRKAVEDCQHAGVNVKMITGDN 670
Query: 476 VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLM 535
VFTA+AIATECGIL+P Q + AV+EGE FRNYT EERMEKVDKI VMARSSPFDKLLM
Sbjct: 671 VFTARAIATECGILRPDQGINNEAVVEGEVFRNYTPEERMEKVDKIRVMARSSPFDKLLM 730
Query: 536 VQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARV 595
VQCLKQ GHVVAVT DGTNDAPALKE DIGLSMGIQGTEVAKESSDI+ILDDNFASVA V
Sbjct: 731 VQCLKQNGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFASVATV 790
Query: 596 LRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALA 655
LRWGRCV+ NIQK IQFQLT NVAAL+INFVAAV AGE+PLTAVQLLWVNLIMDTLGALA
Sbjct: 791 LRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALA 850
Query: 656 LATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNKKVK 715
LATE+PT ELMD+PPVGRT PLITNIMWRNL+AQA+YQ AVLLTLQF+GESIFGV++KVK
Sbjct: 851 LATEQPTNELMDRPPVGRTGPLITNIMWRNLLAQAMYQIAVLLTLQFKGESIFGVSEKVK 910
Query: 716 ETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFAD 775
+TLIFNTFVLCQVFNEFNAR+LEKKNVFEGIHKN+LFLGIIG TI+LQVVMVEFLK FAD
Sbjct: 911 DTLIFNTFVLCQVFNEFNARRLEKKNVFEGIHKNKLFLGIIGITIILQVVMVEFLKKFAD 970
Query: 776 TERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLKW 817
TERLNWGQW AC+G AA SWP+GW+VKCIPV KPF SYL+W
Sbjct: 971 TERLNWGQWGACLGIAAVSWPLGWVVKCIPVSNKPFLSYLRW 1012
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359477570|ref|XP_002279443.2| PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/466 (79%), Positives = 418/466 (89%)
Query: 352 VLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRC 411
++ KKTDNT HVHWKGAAEMILAMCSSYYDASG +K L+ E+ F+QIIQGMA+SSLRC
Sbjct: 544 LMRKKTDNTIHVHWKGAAEMILAMCSSYYDASGRMKDLNVTERMTFEQIIQGMAASSLRC 603
Query: 412 IAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMI 471
IAFAHKQ+PEEEH ++ ++K+ ED+LTL+GL+GIKDPCRPGV+KAVEDCQ+AGVN+KMI
Sbjct: 604 IAFAHKQIPEEEHEIKEGRQKIKEDSLTLIGLMGIKDPCRPGVRKAVEDCQHAGVNVKMI 663
Query: 472 TGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFD 531
TGDNVFTA+AIATECGILK Q+ ++ V+EGE FR YT EERMEKVDKICVMARSSPFD
Sbjct: 664 TGDNVFTARAIATECGILKADQNMNSEVVIEGEAFRKYTPEERMEKVDKICVMARSSPFD 723
Query: 532 KLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFAS 591
KLLM++CLKQKGHVVAVT DGTNDAPALKE DIGLSMGIQGTEVAKESSDI+ILDDNFAS
Sbjct: 724 KLLMIRCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFAS 783
Query: 592 VARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTL 651
VA VLRWGRCV+ NIQK IQFQLT N+AAL INFVA + AGE+PLTAVQLLWVNLIMDTL
Sbjct: 784 VAMVLRWGRCVYNNIQKFIQFQLTVNLAALAINFVAVLSAGEVPLTAVQLLWVNLIMDTL 843
Query: 652 GALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVN 711
GALALATE+PTKELM+K PVG+ EPLITNIMWRNL+AQALYQ AVLLTLQF+G SIFGV
Sbjct: 844 GALALATEQPTKELMEKQPVGKVEPLITNIMWRNLLAQALYQIAVLLTLQFKGGSIFGVK 903
Query: 712 KKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLK 771
K+K TLIFNTFVLCQVFNEFNARKLEKKN+F+GIHKN+LFLG+IG T++LQVVMVEFL
Sbjct: 904 DKIKNTLIFNTFVLCQVFNEFNARKLEKKNIFKGIHKNKLFLGVIGITVILQVVMVEFLN 963
Query: 772 NFADTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLKW 817
FADTERL+ GQW ACI AA SWPIG++VKCIPV KPF YLKW
Sbjct: 964 KFADTERLDRGQWEACIAIAAMSWPIGFVVKCIPVSEKPFLRYLKW 1009
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 819 | ||||||
| TAIR|locus:2084578 | 1017 | AT3G22910 [Arabidopsis thalian | 0.559 | 0.450 | 0.751 | 3.8e-300 | |
| TAIR|locus:2087363 | 1033 | AT3G63380 [Arabidopsis thalian | 0.554 | 0.439 | 0.729 | 1.4e-280 | |
| TAIR|locus:2175579 | 1074 | ACA8 ""autoinhibited Ca2+ -ATP | 0.564 | 0.430 | 0.613 | 1.3e-217 | |
| TAIR|locus:2123924 | 1069 | ACA10 "autoinhibited Ca(2+)-AT | 0.567 | 0.434 | 0.592 | 1.3e-215 | |
| TAIR|locus:2094726 | 1086 | ACA9 "autoinhibited Ca(2+)-ATP | 0.556 | 0.419 | 0.583 | 2.2e-209 | |
| TAIR|locus:2082528 | 1025 | ACA11 "autoinhibited Ca2+-ATPa | 0.525 | 0.419 | 0.507 | 4.2e-171 | |
| TAIR|locus:2029794 | 1020 | ACA1 "autoinhibited Ca2+-ATPas | 0.529 | 0.425 | 0.495 | 6.3e-168 | |
| TAIR|locus:2062673 | 1030 | ACA4 ""autoinhibited Ca(2+)-AT | 0.528 | 0.420 | 0.488 | 1e-167 | |
| TAIR|locus:2059201 | 1015 | ACA7 "auto-regulated Ca2+-ATPa | 0.526 | 0.424 | 0.507 | 3.5e-165 | |
| TAIR|locus:2120096 | 1014 | ACA2 "calcium ATPase 2" [Arabi | 0.527 | 0.426 | 0.504 | 6.5e-164 |
| TAIR|locus:2084578 AT3G22910 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1811 (642.6 bits), Expect = 3.8e-300, Sum P(2) = 3.8e-300
Identities = 351/467 (75%), Positives = 400/467 (85%)
Query: 355 KKTDNTSH--VHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCI 412
KK NT + VHWKGAAE ILAMCS++ D SG ++ + +++K +F++IIQ MA+ SLRCI
Sbjct: 556 KKGVNTENNVVHWKGAAEKILAMCSTFCDGSGVVREMKEDDKIQFEKIIQSMAAKSLRCI 615
Query: 413 AFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMIT 472
AFA+ + + +D KKL E+ L+LLG++GIKDPCRPGVKKAVEDCQ+AGVNIKMIT
Sbjct: 616 AFAYSE-------DNEDNKKLKEEKLSLLGIIGIKDPCRPGVKKAVEDCQFAGVNIKMIT 668
Query: 473 GDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDK 532
GDN+FTA+AIA ECGIL P + ++ AVLEGE+FRNYT EER+EKV++I VMARSSPFDK
Sbjct: 669 GDNIFTARAIAVECGILTPEDEMNSEAVLEGEKFRNYTQEERLEKVERIKVMARSSPFDK 728
Query: 533 LLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASV 592
LLMV+CLK+ GHVVAVT DGTNDAPALKE DIGLSMGIQGTEVAKESSDIVILDDNFASV
Sbjct: 729 LLMVKCLKELGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASV 788
Query: 593 ARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLG 652
A VL+WGRCV+ NIQK IQFQLT NVAAL+INFVAAV AG++PLTAVQLLWVNLIMDTLG
Sbjct: 789 ATVLKWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGDVPLTAVQLLWVNLIMDTLG 848
Query: 653 ALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNK 712
ALALATEKPT +LM K P+GR PLITNIMWRNL+AQA YQ +VLL LQFRG SIF V +
Sbjct: 849 ALALATEKPTNDLMKKKPIGRVAPLITNIMWRNLLAQAFYQISVLLVLQFRGRSIFNVTE 908
Query: 713 KVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKN 772
KVK TLIFNTFVLCQVFNEFNAR LEKKNVF+G+HKNRLF+GII T+VLQVVMVEFLK
Sbjct: 909 KVKNTLIFNTFVLCQVFNEFNARSLEKKNVFKGLHKNRLFIGIIVVTVVLQVVMVEFLKR 968
Query: 773 FADTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLKWKK 819
FADTERLN GQW CI AAASWPIGWLVK +PVP + F SYLKWKK
Sbjct: 969 FADTERLNLGQWGVCIAIAAASWPIGWLVKSVPVPERHFFSYLKWKK 1015
|
|
| TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1725 (612.3 bits), Expect = 1.4e-280, Sum P(2) = 1.4e-280
Identities = 337/462 (72%), Positives = 380/462 (82%)
Query: 355 KKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAF 414
+K+DNT HVHWKGAAEM+LAMCS YY ++G++ +D K R Q IIQGMA+SSLRCIAF
Sbjct: 563 RKSDNTVHVHWKGAAEMVLAMCSHYYTSTGSVDLMDSTAKSRIQAIIQGMAASSLRCIAF 622
Query: 415 AHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGD 474
AHK + L ED LTL+G+VG+KDPCRPGV KAVE C+ AGV IKMITGD
Sbjct: 623 AHKIASNDS--------VLEEDGLTLMGIVGLKDPCRPGVSKAVETCKLAGVTIKMITGD 674
Query: 475 NVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLL 534
NVFTAKAIA ECGIL AV+EG +FRNYT EERM+KVDKI VMARSSP DKLL
Sbjct: 675 NVFTAKAIAFECGILDHNDKDEEDAVVEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLL 734
Query: 535 MVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVAR 594
MV+CL+ KGHVVAVT DGTNDAPALKE DIGLSMGIQGTEVAKESSDIVILDDNFASVA
Sbjct: 735 MVKCLRLKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVAT 794
Query: 595 VLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGAL 654
VL+WGRCV+ NIQK IQFQLT NVAAL+INF+AA+ AGE+PLTAVQLLWVNLIMDTLGAL
Sbjct: 795 VLKWGRCVYNNIQKFIQFQLTVNVAALVINFIAAISAGEVPLTAVQLLWVNLIMDTLGAL 854
Query: 655 ALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNKKV 714
ALATE+PT EL+ + PVGRTE LITN+MWRNL+ Q+LYQ AVLL LQF+G SIF V K+V
Sbjct: 855 ALATERPTNELLKRKPVGRTEALITNVMWRNLLVQSLYQIAVLLILQFKGMSIFSVRKEV 914
Query: 715 KETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFA 774
K+TLIFNTFVLCQVFNEFNAR++EKKNVF+G+H+NRLF+GII TIVLQV+MVEFLK FA
Sbjct: 915 KDTLIFNTFVLCQVFNEFNAREMEKKNVFKGLHRNRLFIGIIAITIVLQVIMVEFLKKFA 974
Query: 775 DTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLK 816
DT RLN QW CI A+ SWPIG+ K IPV PF SY K
Sbjct: 975 DTVRLNGWQWGTCIALASLSWPIGFFTKFIPVSETPFLSYFK 1016
|
|
| TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1456 (517.6 bits), Expect = 1.3e-217, Sum P(2) = 1.3e-217
Identities = 289/471 (61%), Positives = 350/471 (74%)
Query: 355 KKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAF 414
K D HVHWKGA+E++LA C SY D GN+ + D++ F+ I MA +LRC+A
Sbjct: 587 KTADGEVHVHWKGASEIVLASCRSYIDEDGNVAPMTDDKASFFKNGINDMAGRTLRCVAL 646
Query: 415 AHKQVPEEEHRNEKDQKKLI--EDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMIT 472
A + E+ ++ K + ED+L LL +VGIKDPCRPGVK +V CQ AGV ++M+T
Sbjct: 647 AFRTYEAEKVPTGEELSKWVLPEDDLILLAIVGIKDPCRPGVKDSVVLCQNAGVKVRMVT 706
Query: 473 GDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDK 532
GDNV TA+AIA ECGIL D S ++EG+ FR T ER + DKI VM RSSP DK
Sbjct: 707 GDNVQTARAIALECGILSSDADLSEPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDK 766
Query: 533 LLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASV 592
LL+VQ L+++GHVVAVT DGTNDAPAL E DIGL+MGI GTEVAKESSDI+ILDDNFASV
Sbjct: 767 LLLVQSLRRQGHVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASV 826
Query: 593 ARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLG 652
+V+RWGR V+ NIQK IQFQLT NVAAL+IN VAA+ +G++PLTAVQLLWVNLIMDTLG
Sbjct: 827 VKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLG 886
Query: 653 ALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNK 712
ALALATE PT LM +PPVGR EPLITNIMWRNL+ QA+YQ +VLLTL FRG SI G+
Sbjct: 887 ALALATEPPTDHLMGRPPVGRKEPLITNIMWRNLLIQAIYQVSVLLTLNFRGISILGLEH 946
Query: 713 -------KVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVV 765
+VK T+IFN FVLCQ FNEFNARK ++KN+F+G+ KNRLF+GII T+VLQV+
Sbjct: 947 EVHEHATRVKNTIIFNAFVLCQAFNEFNARKPDEKNIFKGVIKNRLFMGIIVITLVLQVI 1006
Query: 766 MVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLK 816
+VEFL FA T +LNW QW C+G SWP+ + K IPVPA P S+ LK
Sbjct: 1007 IVEFLGKFASTTKLNWKQWLICVGIGVISWPLALVGKFIPVPAAPISNKLK 1057
|
|
| TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1419 (504.6 bits), Expect = 1.3e-215, Sum P(2) = 1.3e-215
Identities = 282/476 (59%), Positives = 348/476 (73%)
Query: 355 KKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAF 414
K D++ H+HWKGAAE++L C+ Y D S + + +++ + I MA+ SLRC+A
Sbjct: 590 KSPDSSVHIHWKGAAEIVLGSCTHYMDESESFVDMSEDKMGGLKDAIDDMAARSLRCVAI 649
Query: 415 AHKQVPEEEHRNEKDQK---KLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMI 471
A + ++ +++Q +L ED+L LL +VGIKDPCRPGVK +V CQ AGV ++M+
Sbjct: 650 AFRTFEADKIPTDEEQLSRWELPEDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMV 709
Query: 472 TGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFD 531
TGDN+ TAKAIA ECGIL D S ++EG+ FR+Y+ EER ++I VM RSSP D
Sbjct: 710 TGDNIQTAKAIALECGILASDSDASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPND 769
Query: 532 KLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFAS 591
KLL+VQ LK++GHVVAVT DGTNDAPAL E DIGL+MGIQGTEVAKE SDI+ILDDNF S
Sbjct: 770 KLLLVQSLKRRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFES 829
Query: 592 VARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTL 651
V +V+RWGR V+ NIQK IQFQLT NVAAL+IN VAA+ AGE+PLTAVQLLWVNLIMDTL
Sbjct: 830 VVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTL 889
Query: 652 GALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVN 711
GALALATE PT LMD+ PVGR EPLITNIMWRNL QA+YQ VLL L FRG SI +
Sbjct: 890 GALALATEPPTDHLMDRAPVGRREPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLK 949
Query: 712 KK-----VKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVM 766
K VK T+IFN FV+CQVFNEFNARK ++ N+F G+ +N LF+GII TIVLQVV+
Sbjct: 950 SKPNAERVKNTVIFNAFVICQVFNEFNARKPDEINIFRGVLRNHLFVGIISITIVLQVVI 1009
Query: 767 VEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLK---WKK 819
VEFL FA T +L+W W CIG + SWP+ + K IPVP P S Y + W++
Sbjct: 1010 VEFLGTFASTTKLDWEMWLVCIGIGSISWPLAVIGKLIPVPETPVSQYFRINRWRR 1065
|
|
| TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1371 (487.7 bits), Expect = 2.2e-209, Sum P(2) = 2.2e-209
Identities = 275/471 (58%), Positives = 342/471 (72%)
Query: 358 DNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHK 417
D+ +HWKGAAE++LA C+ Y D++G ++ ++ ++KE F+ I MA +SLRC+A A +
Sbjct: 607 DSEVFIHWKGAAEIVLACCTQYMDSNGTLQSIE-SQKEFFRVAIDSMAKNSLRCVAIACR 665
Query: 418 -----QVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMIT 472
QVP+E+ + D+ L ED L LL +VGIKDPCRPGV++AV C AGV ++M+T
Sbjct: 666 TQELNQVPKEQE--DLDKWALPEDELILLAIVGIKDPCRPGVREAVRICTSAGVKVRMVT 723
Query: 473 GDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDK 532
GDN+ TAKAIA ECGIL + ++EG+ FR + +ER + KI VM RSSP DK
Sbjct: 724 GDNLQTAKAIALECGILSSDTEAVEPTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDK 783
Query: 533 LLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASV 592
LL+VQ L++ G VVAVT DGTNDAPAL E DIGLSMGI GTEVAKESSDI+ILDDNFASV
Sbjct: 784 LLLVQALRKNGDVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASV 843
Query: 593 ARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLG 652
+V+RWGR V+ NIQK IQFQLT NVAAL+IN VAA+ +G++PL AVQLLWVNLIMDTLG
Sbjct: 844 VKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAMSSGDVPLKAVQLLWVNLIMDTLG 903
Query: 653 ALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNK 712
ALALATE PT LM + PVGR EPLITNIMWRNL+ Q+ YQ AVLL L F G SI G+N
Sbjct: 904 ALALATEPPTDHLMHRTPVGRREPLITNIMWRNLLVQSFYQVAVLLVLNFAGLSILGLNH 963
Query: 713 K-------VKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVV 765
+ VK T+IFN FV+CQ+FNEFNARK ++ NVF G++KN LF+ I+G T +LQ++
Sbjct: 964 ENHAHAVEVKNTMIFNAFVMCQIFNEFNARKPDEMNVFRGVNKNPLFVAIVGVTFILQII 1023
Query: 766 MVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLK 816
+V FL FA T RL W W A I SWP+ + K IPVP P S Y K
Sbjct: 1024 IVTFLGKFAHTVRLGWQLWLASIIIGLVSWPLAIVGKLIPVPKTPMSVYFK 1074
|
|
| TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1115 (397.6 bits), Expect = 4.2e-171, Sum P(2) = 4.2e-171
Identities = 226/445 (50%), Positives = 298/445 (66%)
Query: 366 KGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR 425
KGA+E++L MC D++G L + + +I+G AS +LR + + + +E R
Sbjct: 572 KGASEIVLKMCEKVVDSNGESVPLSEEKIASISDVIEGFASEALRTLCLVYTDL-DEAPR 630
Query: 426 NEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE 485
+ L TL+ +VGIKDP RPGV++AV+ CQ AG+ ++M+TGDN+ TAKAIA E
Sbjct: 631 GD-----LPNGGYTLVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKE 685
Query: 486 CGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHV 545
CGIL G G +EG +FRN E + KI VMARS P DK +V L++ G V
Sbjct: 686 CGILTAG-----GVAIEGSDFRNLPPHEMRAILPKIQVMARSLPLDKHTLVNNLRKMGEV 740
Query: 546 VAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTN 605
VAVT DGTNDAPAL E DIGL+MGI GTEVAKE++D++I+DDNFA++ V +WGR V+ N
Sbjct: 741 VAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYIN 800
Query: 606 IQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKEL 665
IQK +QFQLT NV AL+INFV+A G PLTAVQLLWVN+IMDTLGALALATE P + L
Sbjct: 801 IQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGL 860
Query: 666 MDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNKK----VKETLIFN 721
M + P+GRT IT MWRN++ Q++YQ VL L F G+ I +N V T+IFN
Sbjct: 861 MKRQPIGRTASFITRAMWRNIIGQSIYQLIVLGILNFAGKQILNLNGPDSTIVLNTIIFN 920
Query: 722 TFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFADTERLNW 781
+FV CQVFNE N+R++EK NVFEG+ K+ +F+ ++ T+ QV++VEFL FA T L+W
Sbjct: 921 SFVFCQVFNEVNSREIEKINVFEGMFKSWVFVAVMTATVGFQVIIVEFLGAFASTVPLSW 980
Query: 782 GQWSACIGFAAASWPIGWLVKCIPV 806
W CI + S + +KCIPV
Sbjct: 981 QHWLLCILIGSVSMILAVGLKCIPV 1005
|
|
| TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1108 (395.1 bits), Expect = 6.3e-168, Sum P(2) = 6.3e-168
Identities = 222/448 (49%), Positives = 304/448 (67%)
Query: 364 HWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEE 423
H KGA+E++L C Y + G + LD+ + II+ AS +LR + A+ ++ +E
Sbjct: 579 HCKGASEIVLDSCDKYINKDGEVVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEF 638
Query: 424 HRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIA 483
+ + T +G+VGIKDP RPGVK++V C+ AG+ ++M+TGDN+ TAKAIA
Sbjct: 639 SL----EAPIPSGGYTCIGIVGIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTAKAIA 694
Query: 484 TECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQK- 542
ECGIL T G +EG EFR + EE ++ + K+ VMARSSP DK +V+ L+
Sbjct: 695 RECGIL-----TDDGIAIEGPEFREKSDEELLKLIPKLQVMARSSPMDKHTLVRLLRTMF 749
Query: 543 GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCV 602
VVAVT DGTNDAPAL E DIGL+MGI GTEVAKES+D++ILDDNF+++ V +WGR V
Sbjct: 750 QEVVAVTGDGTNDAPALHEADIGLAMGISGTEVAKESADVIILDDNFSTIVTVAKWGRSV 809
Query: 603 HTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPT 662
+ NIQK +QFQLT NV AL++NF++A G PLTAVQLLWVN+IMDTLGALALATE P
Sbjct: 810 YINIQKFVQFQLTVNVVALIVNFLSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPQ 869
Query: 663 KELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNKKVKE----TL 718
+LM + PVGR I+N+MWRN++ Q+LYQ ++ LQ +G+++FG++ + TL
Sbjct: 870 DDLMKRSPVGRKGNFISNVMWRNILGQSLYQLVIIWCLQTKGKTMFGLDGPDSDLTLNTL 929
Query: 719 IFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFADTER 778
IFN FV CQVFNE ++R++EK +VF+GI KN +F+ ++ T+V QV+++E L FADT
Sbjct: 930 IFNIFVFCQVFNEISSREMEKIDVFKGILKNYVFVAVLTCTVVFQVIIIELLGTFADTTP 989
Query: 779 LNWGQWSACIGFAAASWPIGWLVKCIPV 806
LN GQW I P+ +K IPV
Sbjct: 990 LNLGQWLVSIILGFLGMPVAAALKMIPV 1017
|
|
| TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1086 (387.4 bits), Expect = 1.0e-167, Sum P(2) = 1.0e-167
Identities = 219/448 (48%), Positives = 298/448 (66%)
Query: 366 KGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR 425
KGA+E++L MC + D++G L + II+G AS +LR + +K +
Sbjct: 575 KGASEIVLKMCENVVDSNGESVPLTEERITSISDIIEGFASEALRTLCLVYKDL------ 628
Query: 426 NEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE 485
+E +L + T++ +VGIKDP RPGV++AV+ CQ AG+ ++M+TGDN+ TAKAIA E
Sbjct: 629 DEAPSGELPDGGYTMVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKE 688
Query: 486 CGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHV 545
CGI G G +EG EFR+ + E + KI VMARS P DK +V L++ G V
Sbjct: 689 CGIYTEG-----GLAIEGSEFRDLSPHEMRAIIPKIQVMARSLPLDKHTLVSNLRKIGEV 743
Query: 546 VAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTN 605
VAVT DGTNDAPAL E DIGL+MGI GTEVAKE++D++I+DDNF ++ V RWGR V+ N
Sbjct: 744 VAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFKTIVNVARWGRAVYIN 803
Query: 606 IQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKEL 665
IQK +QFQLT NV AL+INFV+A G PLTAVQLLWVN+IMDTLGALALATE P + L
Sbjct: 804 IQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGL 863
Query: 666 MDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVN----KKVKETLIFN 721
M + P+ RT IT MWRN+ Q++YQ VL L F G+S+ ++ V T+IFN
Sbjct: 864 MKRAPIARTASFITKTMWRNIAGQSVYQLIVLGILNFAGKSLLKLDGPDSTAVLNTVIFN 923
Query: 722 TFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFADTERLNW 781
+FV CQVFNE N+R++EK NVF+G+ + +F ++ T+V QV++VEFL FA T L+W
Sbjct: 924 SFVFCQVFNEINSREIEKINVFKGMFNSWVFTWVMTVTVVFQVIIVEFLGAFASTVPLSW 983
Query: 782 GQWSACIGFAAASWPIGWLVKCIPVPAK 809
W I + + + ++KC+PV ++
Sbjct: 984 QHWLLSILIGSLNMIVAVILKCVPVESR 1011
|
|
| TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1072 (382.4 bits), Expect = 3.5e-165, Sum P(2) = 3.5e-165
Identities = 229/451 (50%), Positives = 303/451 (67%)
Query: 364 HWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQI-IQGMASSSLRCIAFAHKQVPEE 422
H KGA+E++LA C ++SG + LDD E +F + I A+ +LR + A+ +
Sbjct: 577 HTKGASEIVLAACDKVINSSGEVVPLDD-ESIKFLNVTIDEFANEALRTLCLAYMDI--- 632
Query: 423 EHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAI 482
E D+ + E T +G+VGIKDP RPGV+++VE C+ AG+ ++M+TGDN+ TAKAI
Sbjct: 633 ESGFSADEG-IPEKGFTCIGIVGIKDPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAI 691
Query: 483 ATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQK 542
A ECGIL T G +EG FR EE +E + KI VMARSSP DK +V+ L+
Sbjct: 692 ARECGIL-----TDDGIAIEGPVFREKNQEEMLELIPKIQVMARSSPMDKHTLVKQLRTT 746
Query: 543 -GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRC 601
VVAVT DGTNDAPAL E DIGL+MGI GTEVAKE +D++ILDDNF+++ V +WGR
Sbjct: 747 FDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKEIADVIILDDNFSTIVTVAKWGRS 806
Query: 602 VHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKP 661
V+ NIQK +QFQLT NV AL++NF +A G PLTAVQLLWVN+IMDTLGALALATE P
Sbjct: 807 VYINIQKFVQFQLTVNVVALIVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPP 866
Query: 662 TKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGV----NKKVKET 717
ELM + PVGR ITN MWRN++ QA+YQ ++ LQ +G+S+FG+ + V T
Sbjct: 867 NNELMKRMPVGRRGNFITNAMWRNILGQAVYQFIIIWILQAKGKSMFGLVGSDSTLVLNT 926
Query: 718 LIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFADTE 777
LIFN FV CQVFNE ++R++E+ +VF+GI N +F+ +IG T+ Q++++EFL FA T
Sbjct: 927 LIFNCFVFCQVFNEVSSREMEEIDVFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTT 986
Query: 778 RLNWGQW--SACIGFAAASWPIGWLVKCIPV 806
L QW S +GF PI +K IPV
Sbjct: 987 PLTIVQWFFSIFVGFLGM--PIAAGLKKIPV 1015
|
|
| TAIR|locus:2120096 ACA2 "calcium ATPase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1067 (380.7 bits), Expect = 6.5e-164, Sum P(2) = 6.5e-164
Identities = 227/450 (50%), Positives = 299/450 (66%)
Query: 364 HWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEE 423
H KGA+E++LA C ++SG + LD+ + I A+ +LR + A+ + E
Sbjct: 576 HTKGASEIVLAACDKVVNSSGEVVPLDEESIKYLNVTINEFANEALRTLCLAYMDI---E 632
Query: 424 HRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIA 483
D + T +G+VGIKDP RPGVK++VE C+ AG+ ++M+TGDN+ TAKAIA
Sbjct: 633 GGFSPDDA-IPASGFTCVGIVGIKDPVRPGVKESVELCRRAGITVRMVTGDNINTAKAIA 691
Query: 484 TECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQK- 542
ECGIL T G +EG FR EE +E + KI VMARSSP DK +V+ L+
Sbjct: 692 RECGIL-----TDDGIAIEGPVFREKNQEELLELIPKIQVMARSSPMDKHTLVKQLRTTF 746
Query: 543 GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCV 602
VVAVT DGTNDAPAL E DIGL+MGI GTEVAKES+D++ILDDNF+++ V +WGR V
Sbjct: 747 DEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSV 806
Query: 603 HTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPT 662
+ NIQK +QFQLT NV AL++NF +A G PLTAVQLLWVN+IMDTLGALALATE P
Sbjct: 807 YINIQKFVQFQLTVNVVALVVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPN 866
Query: 663 KELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNKK----VKETL 718
ELM + PVGR ITN MWRN++ QA+YQ V+ LQ +G+++FG++ + TL
Sbjct: 867 DELMKRLPVGRRGNFITNAMWRNILGQAVYQFIVIWILQAKGKAMFGLDGPDSTLMLNTL 926
Query: 719 IFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFADTER 778
IFN FV CQVFNE ++R++E+ +VF+GI N +F+ +IG T+ Q++++EFL FA T
Sbjct: 927 IFNCFVFCQVFNEISSREMEEIDVFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTP 986
Query: 779 LNWGQW--SACIGFAAASWPIGWLVKCIPV 806
L QW S IGF PI +K IPV
Sbjct: 987 LTITQWIFSIFIGFLGM--PIAAGLKTIPV 1014
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LIK7 | ACA13_ARATH | 3, ., 6, ., 3, ., 8 | 0.7478 | 0.5641 | 0.4542 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 819 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-180 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-115 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-83 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-75 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 5e-75 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 5e-60 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 3e-53 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 8e-51 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 9e-50 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 4e-41 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 2e-38 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 3e-36 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 7e-30 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 4e-29 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 3e-28 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-27 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 2e-25 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 4e-25 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-24 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 7e-24 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 5e-22 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 3e-20 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 3e-20 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 6e-19 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 1e-18 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 2e-17 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 3e-17 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 3e-16 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 4e-16 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 4e-16 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-15 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-14 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 4e-14 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 6e-13 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 2e-12 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-11 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 2e-10 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 5e-10 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 3e-09 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 5e-09 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 1e-08 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 1e-06 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 1e-05 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 7e-05 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 8e-05 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 9e-05 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 2e-04 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 5e-04 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 8e-04 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 542 bits (1399), Expect = e-180
Identities = 231/466 (49%), Positives = 312/466 (66%), Gaps = 18/466 (3%)
Query: 350 LAVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSL 409
++V++K + KGA+E++L C D++G + D++K+R +I+ +AS +L
Sbjct: 487 MSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDAL 546
Query: 410 RCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIK 469
R I A++ EE +K LTL+G+VGIKDP RPGV++AV++CQ AG+ ++
Sbjct: 547 RTICLAYRDFAPEE----FPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVR 602
Query: 470 MITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSP 529
M+TGDN+ TAKAIA CGIL G G +EG+EFR+ +EE + K+ V+ARSSP
Sbjct: 603 MVTGDNIDTAKAIARNCGILTFG-----GLAMEGKEFRSLVYEEMDPILPKLRVLARSSP 657
Query: 530 FDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNF 589
DK L+V LK G VVAVT DGTNDAPALK D+G SMGI GTEVAKE+SDI++LDDNF
Sbjct: 658 LDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNF 717
Query: 590 ASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMD 649
AS+ R ++WGR V+ NI+K +QFQLT NV A+++ FV + + PLTAVQLLWVNLIMD
Sbjct: 718 ASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMD 777
Query: 650 TLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFG 709
TL ALALATE PT+ L+D+ P+GR PLI+ MW+N++ QA YQ V L F G SIF
Sbjct: 778 TLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFD 837
Query: 710 VN---------KKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTI 760
V+ + T++FNTFVL Q+FNE NARKL ++NVFEG+ KNR+F+ I+G T
Sbjct: 838 VSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTF 897
Query: 761 VLQVVMVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPV 806
QV++VEF +F T L+ QW C+ S G L++ IPV
Sbjct: 898 GFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 943
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 370 bits (951), Expect = e-115
Identities = 152/439 (34%), Positives = 236/439 (53%), Gaps = 24/439 (5%)
Query: 366 KGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR 425
KGA E+IL C S G ++ L + ++ ++ +AS LR +A A+K++ E
Sbjct: 471 KGAPEVILERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKD 526
Query: 426 NEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE 485
+E D+ IE +L LGL GI+DP R VK+A+E+ + AG+ + MITGD+V TA AIA E
Sbjct: 527 DEVDE---IESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE 583
Query: 486 CGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHV 545
CGI + + V++G E + EE E V+++ V AR SP K +V+ L++ GHV
Sbjct: 584 CGIEA---EAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHV 640
Query: 546 VAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTN 605
VA+T DG NDAPALK D+G++MG +GT+ AKE++DIV+LDDNFA++ + GR V+ N
Sbjct: 641 VAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVN 700
Query: 606 IQKLIQFQLTANVAALLINFVAAVYAGEI-PLTAVQLLWVNLIMDTLGALALATEKPTKE 664
I+K I + L+ NV +L + +++ PLT +QLLW+NL+ D+L ALAL E P +
Sbjct: 701 IKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESD 760
Query: 665 LMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNKKVK--------E 716
+M +PP G E L ++ + A+L L F + + + +
Sbjct: 761 VMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQ 820
Query: 717 TLIFNTFVLCQVFNEFNARKLEKKNVFE-GIHKNRLFLGIIGTTIVLQVVMVEFLKNFAD 775
T F VL Q+ R + + N+ + I+LQ++++
Sbjct: 821 TTAFTVLVLIQLLLTLAVR-SRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLK 879
Query: 776 ---TERLNWGQWSACIGFA 791
L+ +W I A
Sbjct: 880 IFQPTPLSLFEWLIAIAVA 898
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 285 bits (731), Expect = 1e-83
Identities = 156/430 (36%), Positives = 233/430 (54%), Gaps = 27/430 (6%)
Query: 354 LKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIA 413
+ + D + KGA E +L C+ Y G L +++ Q+ MAS+ LR IA
Sbjct: 448 VHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIA 507
Query: 414 FAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITG 473
FA EK Q LT LGLVGI DP RPGVK+AV GV I MITG
Sbjct: 508 FASGP--------EKGQ-------LTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITG 552
Query: 474 DNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKL 533
D+ TA +IA G+ + +G L+ ++ + V K+ V AR+SP K+
Sbjct: 553 DSQETAVSIARRLGMPSKTSQSVSGEKLD-----AMDDQQLSQIVPKVAVFARASPEHKM 607
Query: 534 LMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVA 593
+V+ L+++G VVA+T DG NDAPALK DIG++MG GT+VAKE++D+++ DD+FA++
Sbjct: 608 KIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATIL 667
Query: 594 RVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGA 653
+ G+ + NI+ I FQL+ +VAAL + +A + PL A+Q+LW+N++MD A
Sbjct: 668 SAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPA 727
Query: 654 LALATEKPTKELMDKPPVGRTEPLIT-NIMWRNLVAQALYQRAVLLTLQFRGESIFGVNK 712
+L E K++M KPP R + ++T +++ + LV+ + L F E GV
Sbjct: 728 QSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFV--FVREMQDGVIT 785
Query: 713 KVKETLIFNTFVLCQVFNEFNARKLEKKNVFE-GIHKNRLFLGIIGTTIVLQ--VVMVEF 769
T+ F FV +FN R + K+VFE G NR+F +G +I+ Q V+
Sbjct: 786 ARDTTMTFTCFVFFDMFNALACRS-QTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPP 844
Query: 770 LKNFADTERL 779
L++ TE L
Sbjct: 845 LQSVFQTEAL 854
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 264 bits (677), Expect = 1e-75
Identities = 112/299 (37%), Positives = 176/299 (58%), Gaps = 6/299 (2%)
Query: 60 RSPSYTVVNLQHDDESFKIDQTSLVELVKMKDLDKLHEFGGIRGVASALETDFDAGIFGN 119
R + N + T L ++ K + + + GG G+A+ L+TD + G+ +
Sbjct: 5 RRRTSIRDNFTDGFDVGVSILTDLTDIFK-RAMPLYEKLGGAEGIATKLKTDLNEGVRLS 63
Query: 120 DQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGL--- 176
+ RR + + N + P KS V AL D T+++L AV+SL G+ E G
Sbjct: 64 SSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 123
Query: 177 --KEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIF 234
+ GW EG +ILV+V LV+ V+A +++ + QF + ++ + +I VIR G+ QQISI
Sbjct: 124 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIH 183
Query: 235 EIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVAD 294
+IVVGD++ L GD VPA+G+F+ G SL++DESS+TGESD ++ Q+PFL SGT V +
Sbjct: 184 DIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPFLLSGTVVNE 243
Query: 295 GYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVL 353
G RML T+VG+N+ G++M ++ + + TPLQ +L++L GK G+ A L+ VL
Sbjct: 244 GSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLFLVL 302
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 262 bits (671), Expect = 5e-75
Identities = 146/466 (31%), Positives = 230/466 (49%), Gaps = 32/466 (6%)
Query: 357 TDNTSHVHW-KGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASS-SLRCIAF 414
+T + + KGA E +L C+ + G L D K +I+ M ++ +LRC+A
Sbjct: 440 KPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLAL 499
Query: 415 AHKQVP---EEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMI 471
A K +P EE+ ++ + IE +LT +G+VG+ DP RP V A+E C+ AG+ + MI
Sbjct: 500 AFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559
Query: 472 TGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFD 531
TGDN TA+AI GI P +D T G EF ++ + +R P
Sbjct: 560 TGDNKETAEAICRRIGIFSPDEDV-TFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSH 618
Query: 532 KLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFAS 591
K +V+ L+++G +VA+T DG NDAPALK+ DIG++MG GTEVAKE+SD+V+ DDNFA+
Sbjct: 619 KSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFAT 677
Query: 592 VARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTL 651
+ + GR ++ N+++ I++ +++N+ ++ F+ A L VQLLWVNL+ D L
Sbjct: 678 IVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGL 737
Query: 652 GALALATEKPTKELMDKPPVGRTEPLITN---------------------IMWRNLVAQA 690
A AL P K++M KPP EPLIT + W L
Sbjct: 738 PATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFT 797
Query: 691 LYQRAVLLTLQFRG--ESIFGVNKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHK 748
T + K+ T+ + V+ ++FN NA ++ +
Sbjct: 798 GCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWV 857
Query: 749 NRLFLGIIGTTIVLQ--VVMVEFLKNFADTERLNWGQWSACIGFAA 792
N+ +G I ++ L ++ V FL L+ W + +
Sbjct: 858 NKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSL 903
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 220 bits (562), Expect = 5e-60
Identities = 118/328 (35%), Positives = 183/328 (55%), Gaps = 18/328 (5%)
Query: 360 TSHVHWKGAAEMILAMCSSYYDASG-NIKYLDDNEKERFQQIIQGMASSSLRCIAFAHK- 417
T +++ KGA E I+ CSS G I L+D ++E ++ +A+ LR +AFA K
Sbjct: 551 TYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKS 610
Query: 418 ----QVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITG 473
+++ +NE + E +L LGL+GI DP R AVE C AG+N+ M+TG
Sbjct: 611 FDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTG 670
Query: 474 DNVFTAKAIATECGILKPG-----QDTSTGAVLEGEEFRNYTHEERMEKVDKIC-VMARS 527
D TAKAIA E GI+ P + V+ G +F + EE ++ + +C V+AR
Sbjct: 671 DFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEE-VDDLKALCLVIARC 729
Query: 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDD 587
+P K+ M++ L ++ A+T DG ND+P+LK ++G++MGI G++VAK++SDIV+ DD
Sbjct: 730 APQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDD 789
Query: 588 NFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEI-----PLTAVQLL 642
NFAS+ + GR + NI K + L NVA ++ + + E PL+ V++L
Sbjct: 790 NFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEIL 849
Query: 643 WVNLIMDTLGALALATEKPTKELMDKPP 670
W +I A+ L EK +LMD+ P
Sbjct: 850 WCIMITSCFPAMGLGLEKAAPDLMDRLP 877
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 200 bits (509), Expect = 3e-53
Identities = 117/337 (34%), Positives = 186/337 (55%), Gaps = 40/337 (11%)
Query: 366 KGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR 425
KGA E IL CSS G + LD+ KE FQ + R + F H +P+E+
Sbjct: 482 KGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFP 540
Query: 426 N----EKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKA 481
+ D DNL +GL+ + DP R V AV C+ AG+ + M+TGD+ TAKA
Sbjct: 541 EGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKA 600
Query: 482 IATECGILKPGQDT-------------------STGAVLEGEEFRNYTHEERMEKVDKI- 521
IA GI+ G +T + V+ G + ++ T E+ +D+I
Sbjct: 601 IAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQ----LDEIL 656
Query: 522 -----CVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVA 576
V AR+SP KL++V+ +++G +VAVT DG ND+PALK+ DIG++MGI G++V+
Sbjct: 657 KYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVS 716
Query: 577 KESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAAL---LINFVAAVYAGE 633
K+++D+++LDDNFAS+ + GR + N++K I + LT+N+ + LI +A +
Sbjct: 717 KQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANI---P 773
Query: 634 IPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPP 670
+PL + +L ++L D + A++LA EK ++M + P
Sbjct: 774 LPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 186 bits (475), Expect = 8e-51
Identities = 95/307 (30%), Positives = 150/307 (48%), Gaps = 86/307 (28%)
Query: 350 LAVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSL 409
++V+++ D + + KGA E IL C++Y ++ +A L
Sbjct: 323 MSVIVETPDGSDLLFVKGAPEFILERCNNY------------------EEKYLELARQGL 364
Query: 410 RCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIK 469
R +AFA K++ D+L LGL+ +DP RP K+ +E+ + AG+ +
Sbjct: 365 RVLAFASKELE---------------DDLEFLGLITFEDPLRPDAKETIEELKAAGIKVV 409
Query: 470 MITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSP 529
MITGDNV TAKAIA E GI V AR SP
Sbjct: 410 MITGDNVLTAKAIAKELGID---------------------------------VFARVSP 436
Query: 530 FDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNF 589
KL +V+ L++KGH+VA+T DG NDAPALK+ D+G++MG AK ++DIV+LDD+
Sbjct: 437 EQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDDL 490
Query: 590 ASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMD 649
+++ + ++ GR + +NI+ I + + N+ + + + V L++
Sbjct: 491 SAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVI--------------ILLLP 536
Query: 650 TLGALAL 656
L ALAL
Sbjct: 537 MLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 172 bits (438), Expect = 9e-50
Identities = 60/173 (34%), Positives = 93/173 (53%), Gaps = 3/173 (1%)
Query: 633 EIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALY 692
+PLT +Q+LW+NL+ D L ALAL E P +LM +PP EPL + + R ++ Q L
Sbjct: 1 PLPLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLL 60
Query: 693 QRAVLLTLQFRGESIFGVN-KKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRL 751
V L + F G FG++ + +T+ FNT VL Q+FN NAR L + G+ N+L
Sbjct: 61 IAIVTLLVFFLGLLGFGISESGLAQTMAFNTLVLSQLFNALNARSLRRSLFKIGLFSNKL 120
Query: 752 FLGIIGTTIVLQVVMVE--FLKNFADTERLNWGQWSACIGFAAASWPIGWLVK 802
L + +++LQ++++ L+ T L+ QW +G A + L K
Sbjct: 121 LLLAVLLSLLLQLLIIYVPGLQAVFGTTPLSLEQWLIVLGLALVVLLVVELRK 173
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 4e-41
Identities = 63/191 (32%), Positives = 104/191 (54%), Gaps = 4/191 (2%)
Query: 186 ILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLK 245
IL+ V + + A + + K+ VIR+G+ ++I E+VVGD++ LK
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 246 IGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVG 305
GD+VPA+G ++G SL+VDES++TGES VE S+ +F+GT V G +++ T+ G
Sbjct: 62 PGDRVPADGRIIEG-SLEVDESALTGESLPVEK--SRGDTVFAGTVVLSGELKVIVTATG 118
Query: 306 MNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLLKKTDNTSHVHW 365
+T G++ + S +TPLQ L+KL I LA+A LV + + +
Sbjct: 119 EDTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIWFFRGGDFLEALL 178
Query: 366 KGAAEMILAMC 376
+ A +++A C
Sbjct: 179 RALA-VLVAAC 188
|
Length = 222 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 153 bits (389), Expect = 2e-38
Identities = 95/320 (29%), Positives = 159/320 (49%), Gaps = 14/320 (4%)
Query: 350 LAVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSL 409
L+V+++ + + KGA E +L +C+ + G + L ++EK Q + M +
Sbjct: 421 LSVVVENRAEVTRLICKGAVEEMLTVCT-HKRFGGAVVTLSESEKSELQDMTAEMNRQGI 479
Query: 410 RCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIK 469
R IA A K + E D K E+ L + G +G DP + K+A+ G+N+K
Sbjct: 480 RVIAVATKTLKV----GEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVK 535
Query: 470 MITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSP 529
++TGDN I E GI D GA +E + EE ++ K + AR +P
Sbjct: 536 VLTGDNEIVTARICQEVGI--DANDFLLGADIEE-----LSDEELARELRKYHIFARLTP 588
Query: 530 FDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNF 589
K ++ LK+ GH V DG NDAPAL++ D+G+S+ ++AKE+SDI++L+ +
Sbjct: 589 MQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSL 647
Query: 590 ASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMD 649
+ + GR NI K ++ ++N + VA+ + +P+ ++ LL NL+ D
Sbjct: 648 MVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD 707
Query: 650 TLGALALATEKPTKELMDKP 669
L L +K +E + KP
Sbjct: 708 -FSQLTLPWDKMDREFLKKP 726
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 147 bits (372), Expect = 3e-36
Identities = 72/264 (27%), Positives = 123/264 (46%), Gaps = 19/264 (7%)
Query: 104 VASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCA 163
+ L T G+ ++++ RR + + N + +SL + KD I++LL A
Sbjct: 33 LLLELFTSPTTGLS--EEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAA 90
Query: 164 VLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVI 223
+LS G + IL+ V + + + + + K+S+ + V+
Sbjct: 91 LLSAFVGDWVDAGVDAIV----ILLVVVINALLGFVQEYRAEKALEALKKMSSP-KAKVL 145
Query: 224 RNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVE------ 277
R+G+ +I E+V GD++ L+ GD VPA+ L+ L+VDES++TGES VE
Sbjct: 146 RDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPL 205
Query: 278 ------VNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARL 331
+ ++ LFSGT V G A+ + + G T +G++ + +TPLQ +L
Sbjct: 206 TKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKL 265
Query: 332 NKLTSSTGKIGLAVAFLVLAVLLK 355
NKL + L + LV V L
Sbjct: 266 NKLGKFLLVLALVLGALVFVVGLF 289
|
Length = 917 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 7e-30
Identities = 89/304 (29%), Positives = 152/304 (50%), Gaps = 14/304 (4%)
Query: 366 KGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR 425
KGA E IL +CS +G I LDD R +++ + LR +A A K +P
Sbjct: 472 KGALEEILNVCS-QVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPA---- 526
Query: 426 NEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE 485
E D ++ E +L L G + DP + A++ + +GV +K++TGD+ A + E
Sbjct: 527 REGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE 586
Query: 486 CGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHV 545
G+ G VL G + + +E ++ + AR +P K +V LK++GHV
Sbjct: 587 VGL-------DAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHV 639
Query: 546 VAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTN 605
V DG NDAPAL+ DIG+S+ ++A+E++DI++L+ + + + GR N
Sbjct: 640 VGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFAN 698
Query: 606 IQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKEL 665
+ K I+ ++N + VA+ + +P+ + LL NL+ D + +A+ + E
Sbjct: 699 MLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQ 757
Query: 666 MDKP 669
+ KP
Sbjct: 758 IQKP 761
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 4e-29
Identities = 98/329 (29%), Positives = 167/329 (50%), Gaps = 30/329 (9%)
Query: 350 LAVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSL 409
L+V+++ + KGA E +LA+ + D ++ LD+ +ER + + +
Sbjct: 454 LSVVVEDAQGQHLLICKGAVEEMLAVATHVRDG-DTVRPLDEARRERLLALAEAYNADGF 512
Query: 410 RCIAFAHKQVPEEEHRNE---KDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGV 466
R + A +++P E R + D E +L + G + DP + A+ + GV
Sbjct: 513 RVLLVATREIPGGESRAQYSTAD-----ERDLVIRGFLTFLDPPKESAAPAIAALRENGV 567
Query: 467 NIKMITGDN-VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA 525
+K++TGDN + TAK I E G L+PG+ L G E +V++ V A
Sbjct: 568 AVKVLTGDNPIVTAK-ICREVG-LEPGE------PLLGTEIEAMDDAALAREVEERTVFA 619
Query: 526 RSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVIL 585
+ +P K +++ L+ GH V DG NDAPAL++ D+G+S+ G ++AKES+DI++L
Sbjct: 620 KLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILL 678
Query: 586 DDNFASVARVLRWGRCVHTNIQKLIQFQLTA-----NVAALLINFVAAVYAGEIPLTAVQ 640
+ + + + GR NI K + +TA NV ++L VA+ + +P+ A+
Sbjct: 679 EKSLMVLEEGVIKGRETFGNIIKYL--NMTASSNFGNVFSVL---VASAFIPFLPMLAIH 733
Query: 641 LLWVNLIMDTLGALALATEKPTKELMDKP 669
LL NL+ D + L+L +K KE + KP
Sbjct: 734 LLLQNLMYD-ISQLSLPWDKMDKEFLRKP 761
|
Length = 903 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 3e-28
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 33/186 (17%)
Query: 439 TLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTG 498
L+G++ + D RP K+A+ + G+ + M+TGDN TA+AIA E GI
Sbjct: 527 KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI---------- 576
Query: 499 AVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPA 558
+E R A P DK +V+ L+ +G VA+ DG NDAPA
Sbjct: 577 -----DEVR-----------------AELLPEDKAEIVRELQAEGRKVAMVGDGINDAPA 614
Query: 559 LKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANV 618
L D+G++MG GT+VA E++D+V++ D+ ++V + R I++ + + N
Sbjct: 615 LAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNA 673
Query: 619 AALLIN 624
A+ +
Sbjct: 674 IAIPLA 679
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 1e-27
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 39/226 (17%)
Query: 415 AHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVED-CQYAGVNIKMITG 473
+ E ++ + + LLG++ ++D RP K+A+ + G+ + M+TG
Sbjct: 350 SASPDLLNEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTG 409
Query: 474 DNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKL 533
DN A+A+A E GI +E A P DKL
Sbjct: 410 DNRSAAEAVAAELGI---------------DEVH-----------------AELLPEDKL 437
Query: 534 LMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVA 593
+V+ L+++G VVA+ DG NDAPAL D+G++MG G++VA E++DIV+L+D+ +S+
Sbjct: 438 AIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLP 496
Query: 594 RVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAV 639
+ R I++ + + L N+ A+ + G +PL +
Sbjct: 497 TAIDLSRKTRRIIKQNLAWALGYNLVAIPLAA-----GGLLPLWLL 537
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 2e-25
Identities = 82/357 (22%), Positives = 145/357 (40%), Gaps = 69/357 (19%)
Query: 366 KGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR 425
KGA E I ++CS + +Q++++ R +A A+K++P+ +
Sbjct: 584 KGAPETIQSLCSP------------ETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQ 631
Query: 426 NEKDQKK-LIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIAT 484
+D + +E NLT LG + ++P +P K+ +++ + A + MITGDN TA +A
Sbjct: 632 KAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVAR 691
Query: 485 ECGILKPG-----------------------------------QDTSTGAVLEGEEFRNY 509
ECGI+ P G + +
Sbjct: 692 ECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASR 751
Query: 510 TH------------EERMEKVDKIC----VMARSSPFDKLLMVQCLKQKGHVVAVTRDGT 553
H E + ++ V AR +P K +V+ L++ + V + DG
Sbjct: 752 YHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGA 811
Query: 554 NDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQ 613
ND ALK+ D+G+S+ VA + + + V V+R GRC + F+
Sbjct: 812 NDCGALKQADVGISLSEAEASVA---APFTSKLASISCVPNVIREGRC--ALVTSFQMFK 866
Query: 614 LTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPP 670
A + + V+ +Y L Q L ++L++ AL ++ KP K+L + P
Sbjct: 867 YMALYSLIQFYSVSILYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERP 923
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 4e-25
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 35/210 (16%)
Query: 416 HKQVPEEEHRNEKDQKK--LIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITG 473
+ + E L+ N L G++ + D +P K+ ++ + G+ M+TG
Sbjct: 379 ENGLKTDGEVEEGGGTTSVLVAVNGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTG 438
Query: 474 DNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKL 533
DN TAKA+A E GI V A P DK
Sbjct: 439 DNRKTAKAVAKELGIEN--------------------------------VRAEVLPDDKA 466
Query: 534 LMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVA 593
+++ L++KG VVA+ DG NDAPAL + D+G+++G GT+VA E++D+V+L ++ VA
Sbjct: 467 ALIKKLQEKGKVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLLRNDLNDVA 525
Query: 594 RVLRWGRCVHTNIQKLIQFQLTANVAALLI 623
+ R I++ + + NV A+ I
Sbjct: 526 TAIDLSRKTLRRIKQNLLWAFGYNVIAIPI 555
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 1e-24
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 38/205 (18%)
Query: 439 TLLGLVGIKDPCRPGVKKAVEDCQYAGV-NIKMITGDNVFTAKAIATECGILKPGQDTST 497
T LG + + D RP +A+ + + G+ + M+TGD A+ +A E GI
Sbjct: 352 TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGI--------- 402
Query: 498 GAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAP 557
+E A P DKL +V+ L++K VA+ DG NDAP
Sbjct: 403 ------DEVH-----------------AELLPEDKLEIVKELREKYGPVAMVGDGINDAP 439
Query: 558 ALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTAN 617
AL D+G++MG G++VA E++D+V+L+D+ + + + +R R +++ + L
Sbjct: 440 ALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGII 499
Query: 618 VAALLINFVAAVYAGEIPLTAVQLL 642
+ +L+ G +PL L
Sbjct: 500 LLLILLAL-----FGVLPLWLAVLG 519
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 7e-24
Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 38/224 (16%)
Query: 366 KGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR 425
KGA ++IL +C +E+ ++ + +AS R + A H
Sbjct: 385 KGAPQVILDLC-----------DNKKEIEEKVEEKVDELASRGYRALGVARTDEEGRWH- 432
Query: 426 NEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE 485
LGL+ + DP R K+ +E ++ GV +KM+TGD++ AK A
Sbjct: 433 --------------FLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR 478
Query: 486 CGILKPGQDTSTGAVLEGEEFRN---YTHEERMEKVDKICVMARSSPFDKLLMVQCLKQK 542
G+ G + T VL + R+ E +E D A P K +V+ L+++
Sbjct: 479 LGL---GTNIYTADVLLKGDNRDDLPSGLGEMVEDADG---FAEVFPEHKYEIVEILQKR 532
Query: 543 GHVVAVTRDGTNDAPALKETDIGLSMGIQG-TEVAKESSDIVIL 585
GH+V +T DG NDAPALK+ D+G++ + G T+ A+ ++DIV+
Sbjct: 533 GHLVGMTGDGVNDAPALKKADVGIA--VAGATDAARSAADIVLT 574
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 5e-22
Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 39/269 (14%)
Query: 104 VASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFY-FVVDALKDLTILILLGC 162
S L+TD G+ + Q+ + R N + +SL+ F+ +K+ IL+L+
Sbjct: 12 TCSKLQTDLQNGL-NSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIAS 70
Query: 163 AVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNI---Q 219
AV+S+ G + + SI +A+ +V+ V F Q + +K + N + +
Sbjct: 71 AVISVFMGNIDDAV--------SITLAILIVVTVG----FVQEYRSEKSLEALNKLVPPE 118
Query: 220 IDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVN 279
+IR G+ + + +V GD++CL +GD+VPA+ ++ L +DES++TGE+ V
Sbjct: 119 CHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKV 178
Query: 280 S---SQNPFL---------FSGTKVADGYARMLATSVGMNTTWGQ---MMSQISRDNSEQ 324
+ F GT V G+ + + G NT +G MM I + +
Sbjct: 179 TAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEK---PK 235
Query: 325 TPLQARLNKLTSSTGKIGLAVAFLVLAVL 353
TPLQ ++ L GK V+F V+ V+
Sbjct: 236 TPLQKSMDLL----GKQLSLVSFGVIGVI 260
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 96.0 bits (239), Expect = 3e-20
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 147 VVDALKDLTILILLGCAVLSLAFGIKEHG--LKEGWYEGGSILVAVFLVIAVSAGSNFTQ 204
V++ +DL + ILL A +S E G + E + L++ +A Q
Sbjct: 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEP----FVILLILVANAIVGVWQ 56
Query: 205 NRQFDKFSKVSNNIQID---VIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHS 261
R +K + + + V+R+GR I ++V GD++ L +GD+VPA+ L +
Sbjct: 57 ERNAEKAIEALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT 116
Query: 262 LQVDESSMTGESDHV-----------EVNSSQNPFLFSGTKVADGYARMLATSVGMNTTW 310
L+VD+S +TGES V VN + LFSGT V G AR + GM+T
Sbjct: 117 LRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEI 176
Query: 311 GQMMSQISRDNSEQTPLQARLN----KLTSSTGKIGLAV 345
G++ ++ E TPLQ +L+ L+ G I + V
Sbjct: 177 GKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILV 215
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 95.8 bits (239), Expect = 3e-20
Identities = 53/155 (34%), Positives = 87/155 (56%), Gaps = 33/155 (21%)
Query: 434 IEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQ 493
+ +N +LG++ +KD +PG+K+ + + G+ MITGDN TA AIA E G+
Sbjct: 432 VVENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV----- 486
Query: 494 DTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGT 553
++F +A ++P DKL +++ + +G +VA+T DGT
Sbjct: 487 ----------DDF-----------------IAEATPEDKLALIRQEQAEGRLVAMTGDGT 519
Query: 554 NDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588
NDAPAL + D+G++M GT+ AKE++++V LD N
Sbjct: 520 NDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSN 553
|
Length = 681 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 91.5 bits (227), Expect = 6e-19
Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 35/203 (17%)
Query: 433 LIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPG 492
+ EDN + G++ +KD + G+K+ + G+ MITGDN TA AIA E G+
Sbjct: 431 VCEDN-RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV---- 485
Query: 493 QDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDG 552
++F +A ++P DK+ +++ + +G +VA+T DG
Sbjct: 486 -----------DDF-----------------IAEATPEDKIALIRQEQAEGKLVAMTGDG 517
Query: 553 TNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQF 612
TNDAPAL + D+G++M GT+ AKE++++V LD + + V+ G+ + L F
Sbjct: 518 TNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTF 576
Query: 613 QLTANVAALLINFVAAVYAGEIP 635
+ AN A + A++A P
Sbjct: 577 SI-ANDVAKYFAIIPAIFAAAYP 598
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 90.3 bits (225), Expect = 1e-18
Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 33/149 (22%)
Query: 440 LLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGA 499
+LG++ +KD +PG+K+ + + G+ MITGDN TA AIA E G+
Sbjct: 436 VLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV----------- 484
Query: 500 VLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPAL 559
++F +A ++P DKL +++ + +G +VA+T DGTNDAPAL
Sbjct: 485 ----DDF-----------------LAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPAL 523
Query: 560 KETDIGLSMGIQGTEVAKESSDIVILDDN 588
+ D+G++M GT+ AKE+ ++V LD N
Sbjct: 524 AQADVGVAMN-SGTQAAKEAGNMVDLDSN 551
|
Length = 679 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 86.3 bits (213), Expect = 2e-17
Identities = 67/245 (27%), Positives = 116/245 (47%), Gaps = 42/245 (17%)
Query: 398 QQIIQGMASSSLRCIAFAHKQVPEE--EHRNEKDQKK-----LIEDNLTLLGLVGIKDPC 450
+++ +G +S ++ + A +P + +K ++EDN +LG++ +KD
Sbjct: 384 REVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNE-ILGVIYLKDVI 442
Query: 451 RPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYT 510
+ G+ + + + G+ M TGDN TA IA E G
Sbjct: 443 KDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG----------------------- 479
Query: 511 HEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGI 570
VD+ +A P DK+ +++ + KGH+VA+T DGTNDAPAL E ++GL+M
Sbjct: 480 -------VDRF--VAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN- 529
Query: 571 QGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVY 630
GT AKE+++++ LD N + V+ G+ + L F + AN A + A++
Sbjct: 530 SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSI-ANDIAKYFAILPAMF 588
Query: 631 AGEIP 635
+P
Sbjct: 589 MAAMP 593
|
Length = 673 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 86.2 bits (214), Expect = 3e-17
Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 16/189 (8%)
Query: 178 EGWYEGGSILVAVFLVIAVSAGSNFTQNRQFD---KFSKVSNNIQIDVIRNGRRQQISIF 234
E W + IL + L + F + + + K S + V+R+G+ Q+I
Sbjct: 53 ENWVDFVIILGLLLLNATIG----FIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPAS 108
Query: 235 EIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVAD 294
E+V GDV+ LKIGD VPA+ +G +QVD++++TGES V + +SG+ V
Sbjct: 109 ELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIA--YSGSTVKQ 166
Query: 295 GYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNK----LTSSTGKIGLAVAFLVL 350
G A + T+ GMNT +G+ + + + LQ L+K L IG+ V ++
Sbjct: 167 GEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVL---IGVLVLIELV 223
Query: 351 AVLLKKTDN 359
+ + ++
Sbjct: 224 VLFFGRGES 232
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 83.2 bits (206), Expect = 3e-16
Identities = 80/347 (23%), Positives = 135/347 (38%), Gaps = 78/347 (22%)
Query: 350 LAVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSL 409
++V+++ D + KGA +I SS + + ++ ++ ++ AS L
Sbjct: 524 MSVIVRNPDGRIKLLCKGADTVIFKRLSSGGN-----QVNEETKEH-----LENYASEGL 573
Query: 410 RCIAFAHKQVPEEEH----------------RNEKDQK--KLIEDNLTLLGLVGIKDPCR 451
R + A++++ EEE+ R EK + IE +L LLG I+D +
Sbjct: 574 RTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633
Query: 452 PGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD------TSTGAVLEGEE 505
GV + +E + AG+ I ++TGD V TA I C +L + S A E
Sbjct: 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDATRSVEA 693
Query: 506 FRNYTHEERMEK-------------VDKICVMARSSPF--DKLLMVQCL----------- 539
+ E E+ +D + + L +
Sbjct: 694 AIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSP 753
Query: 540 KQKGHVVAVTR-----------DGTNDAPALKETDIGLSMGIQGTE--VAKESSDIVILD 586
QK VV + + DG ND ++E D+G+ GI G E A +SD I
Sbjct: 754 SQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV--GISGKEGMQAVMASDFAI-- 809
Query: 587 DNFASVARVLRW-GRCVHTNIQKLIQFQLTANVAALLINFVAAVYAG 632
F + ++L GR + I K+I + N+ +I F + Y G
Sbjct: 810 GQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNG 856
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 82.0 bits (203), Expect = 4e-16
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 11/179 (6%)
Query: 185 SILVAVFLVIAVSAGSNFTQNRQFDKFSK-VSNNIQIDVIRNGRRQQISIFEIVVGDVIC 243
IL V + + + S + N V+RNG ++I ++V GDV+
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGW-KEIPAKDLVPGDVVL 59
Query: 244 LKIGDQVPANGLFLDGHSLQVDESSMTGESDHVE--------VNSSQNPFLFSGTKVADG 295
+K G+ VPA+G+ L G S VDES++TGES+ V + +F+GT V G
Sbjct: 60 VKSGETVPADGVLLSG-SCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGG 118
Query: 296 YARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL 354
++ T G+ TT G++ + +TPLQ++ ++L + + L + L + + L
Sbjct: 119 TLIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFLYL 177
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 82.3 bits (204), Expect = 4e-16
Identities = 65/221 (29%), Positives = 102/221 (46%), Gaps = 49/221 (22%)
Query: 439 TLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTG 498
+LGL+ ++D R ++A+ + + G+ M+TGDN A AIA E GI
Sbjct: 558 DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI---------- 607
Query: 499 AVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPA 558
+FR A P DK+ V L Q +A+ DG NDAPA
Sbjct: 608 ------DFR-----------------AGLLPEDKVKAVTELNQH-APLAMVGDGINDAPA 643
Query: 559 LKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANV 618
+K IG++MG GT+VA E++D + + +A+++ R H NI++ N+
Sbjct: 644 MKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQ--------NI 694
Query: 619 A-ALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALAT 658
AL + + V L + LW+ ++ D+ GA AL T
Sbjct: 695 TIALGLKAIFLVTT----LLGITGLWLAVLADS-GATALVT 730
|
Length = 741 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 80.7 bits (200), Expect = 1e-15
Identities = 39/131 (29%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 222 VIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSS 281
V +G +++ + E+ VGD++ ++ G+++P +G+ + G S VDES +TGES VE
Sbjct: 216 VRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS-VDESMLTGESLPVEKKPG 274
Query: 282 QNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKI 341
+F+GT DG + T VG +TT +++ + S + P+Q +++ S +
Sbjct: 275 DE--VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPV 332
Query: 342 GLAVAFLVLAV 352
L +A L A+
Sbjct: 333 VLVIAALTFAL 343
|
Length = 713 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 78.3 bits (193), Expect = 1e-14
Identities = 58/218 (26%), Positives = 109/218 (50%), Gaps = 15/218 (6%)
Query: 154 LTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSK 213
++L+ +G + LA+GI+ +E + + V + V+ ++ ++ Q + K +
Sbjct: 74 FSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIME 133
Query: 214 VSNNI---QIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMT 270
N+ Q VIR+G + I+ ++VVGD++ +K GD++PA+ + +VD SS+T
Sbjct: 134 SFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLT 193
Query: 271 GESD---------HVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDN 321
GES+ H ++N FS T +G AR + + G T G++ S S
Sbjct: 194 GESEPQTRSPEFTHENPLETRNIAFFS-TNCVEGTARGIVVNTGDRTVMGRIASLASGLE 252
Query: 322 SEQTPLQARLNKLTS-STG-KIGLAVAFLVLAVLLKKT 357
+ +TP+ + TG + L V+F +L+++L T
Sbjct: 253 NGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYT 290
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 75.9 bits (187), Expect = 4e-14
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 33/151 (21%)
Query: 443 LVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLE 502
L+ I+DP R A++ AG + M+TGDN TA AIA E GI D VL
Sbjct: 644 LLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI-----DEVIAGVL- 697
Query: 503 GEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKET 562
P K ++ L+ +G VA+ DG NDAPAL +
Sbjct: 698 --------------------------PDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQA 731
Query: 563 DIGLSMGIQGTEVAKESSDIVILDDNFASVA 593
D+G++MG G++VA E++ I ++ + VA
Sbjct: 732 DVGIAMG-GGSDVAIETAAITLMRHSLMGVA 761
|
Length = 834 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 6e-13
Identities = 38/131 (29%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 222 VIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSS 281
V+R G +++++ E+ VGDV+ +K G++VP +G+ L G S VDES++TGES VE
Sbjct: 59 VLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPG 117
Query: 282 QNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKI 341
+F+G DG ++ T + ++T ++++ + S + Q +++ +
Sbjct: 118 DE--VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPV 175
Query: 342 GLAVAFLVLAV 352
LA+A + V
Sbjct: 176 VLAIALAIWLV 186
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 2e-12
Identities = 38/128 (29%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 225 NGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNP 284
+G +++ + E+ VGD++ ++ G+++P +G+ + G S VDES++TGES VE
Sbjct: 63 DGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESE-VDESALTGESMPVEKKEGDE- 120
Query: 285 FLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLA 344
+F+GT DG + T +G ++T Q++ + S + P+Q +++ S LA
Sbjct: 121 -VFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLA 179
Query: 345 VAFLVLAV 352
+A L V
Sbjct: 180 IALLTFVV 187
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 2e-11
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 24/170 (14%)
Query: 188 VAVFLVIAVSAGSNFTQ----NRQFDKF-SKVSNNIQIDVIRNG------RRQQISIFEI 236
+ L++A+S NF Q + D + VSN V+R +I I ++
Sbjct: 126 GVIALMVAISTLLNFIQEARSTKAADALKAMVSNTAT--VLRVINDKGENGWLEIPIDQL 183
Query: 237 VVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVE-VNSSQNPF---------- 285
V GD+I L GD +PA+ L L V ++S+TGES VE +++ P
Sbjct: 184 VPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTL 243
Query: 286 LFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLT 335
F GT V G A+ + + G NT +GQ+ ++S +SE Q +++++
Sbjct: 244 CFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVS 293
|
Length = 902 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 2e-10
Identities = 53/231 (22%), Positives = 85/231 (36%), Gaps = 47/231 (20%)
Query: 117 FGNDQDIARRHEAFSSNT--YKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEH 174
DIA+R + N P L + L + F +
Sbjct: 139 GLTTGDIAQRKAKYGKNEIEIPVPSFLELL--KEEVLHPFYVF---------QVFSVILW 187
Query: 175 GLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQ-IDVIRNGRRQQISI 233
L E +Y I+ I++S + +Q + + + Q + VIRNG+ I+
Sbjct: 188 LLDEYYYYSLCIVFMSSTSISLSV---YQIRKQMQRLRDMVHKPQSVIVIRNGKWVTIAS 244
Query: 234 FEIVVGDVICLKIGDQ----VPANGLFLDGHSLQVDESSMTGES------------DHVE 277
E+V GD + I +P + + L G S V+ES +TGES D E
Sbjct: 245 DELVPGD--IVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVPVLKFPIPDNGDDDE 301
Query: 278 V----NSSQNPFLFSGTKV-------ADGYARMLATSVGMNTTWGQMMSQI 317
+S+ LF GTK+ D + G +T+ GQ++ I
Sbjct: 302 DLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSI 352
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 5e-10
Identities = 31/128 (24%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Query: 225 NGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNP 284
+G +++ + + GD++ + G+++P +G ++G S +VDES +TGES V
Sbjct: 99 DGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKK--VGD 155
Query: 285 FLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLA 344
+ +GT G + AT+ G +TT Q++ + + + P+Q +K+ + +A
Sbjct: 156 PVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIA 215
Query: 345 VAFLVLAV 352
+A + +
Sbjct: 216 IALITFVI 223
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 60.7 bits (147), Expect = 3e-09
Identities = 50/239 (20%), Positives = 88/239 (36%), Gaps = 37/239 (15%)
Query: 119 NDQDIARRHEAFSSN-TYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLK 177
+ ++ R F N T ++ +L + A + I IL +S
Sbjct: 35 TNVEVTERLAEFGPNQTVEEKKVPNLRLLIR-AFNNPFIYILAMLMGVSYL--------- 84
Query: 178 EGWYEGGSILVAVFLVIAVSAGSNFTQ----NRQFDKFSKVSNNIQIDVIR------NGR 227
+ V + L++ S F Q R + N V+R NG
Sbjct: 85 ---TDDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKN-TATVLRVINENGNGS 140
Query: 228 RQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEV------NSS 281
++ I +V GD+I L GD +PA+ + L +++S++TGES VE
Sbjct: 141 MDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARD 200
Query: 282 QNPF-----LFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLT 335
F GT V G+A+ + + G +T +G + + QT + ++
Sbjct: 201 PEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERR-GQTAFDKGVKSVS 258
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 5e-09
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 24/179 (13%)
Query: 156 ILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVS 215
++L+ A +S F + + W EGG I + L I + + + D ++
Sbjct: 65 CMVLIIAAAIS--FAMHD------WIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLA 116
Query: 216 NNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGES-- 273
+ + VIRNG+ I ++V GD+ LK GD +PA+ ++ + DE+ +TGES
Sbjct: 117 SPMA-HVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLP 175
Query: 274 ------------DHVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRD 320
+ + N FS + V G A+ + + +N+ G + + + D
Sbjct: 176 VIKDAHATFGKEEDTPIGDRIN-LAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGD 233
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 1e-08
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 99 GGIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILI 158
+ V + L TD + G+ + + R E + N + KSL+ + KD ++I
Sbjct: 4 LSVEEVLARLGTDLEKGL--TEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVII 61
Query: 159 LLGCAVLS 166
LL A++S
Sbjct: 62 LLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 1e-06
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 25/137 (18%)
Query: 427 EKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATEC 486
+ +L +LGL+ + DP PG ++A+++ + AG+ + ++TGDN TA AIA
Sbjct: 72 RAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLL 131
Query: 487 GILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDK--LLMVQCLKQKGH 544
G+ + + D ++ P K L ++ L K
Sbjct: 132 GL-----------------------FDALVSADLYGLVGVGKPDPKIFELALEELGVKPE 168
Query: 545 VVAVTRDGTNDAPALKE 561
V + DG ND PA K
Sbjct: 169 EVLMVGDGVNDIPAAKA 185
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 1e-05
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 104 VASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCA 163
V L+TD + G+ + ++ ARR E + N P S + + I ILL A
Sbjct: 12 VLERLQTDLEKGL--SSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNPLIYILLAAA 69
Query: 164 VLSLAF 169
VLS
Sbjct: 70 VLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 7e-05
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 222 VIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSS 281
+R+G R++++I ++ GDVI + G ++PA+G L DES++TGES + V +
Sbjct: 247 RLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP-FASFDESALTGES--IPVERA 303
Query: 282 QNPFLFSGTKVADGYARMLATS 303
+ +G D + S
Sbjct: 304 TGEKVPAGATSVDRLVTLEVLS 325
|
Length = 741 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 8e-05
Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 11/153 (7%)
Query: 225 NGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNP 284
+G + I ++ G ++ + G+Q+P +G + G + VDES++TGES V + S
Sbjct: 112 DGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPV-IKESGGD 169
Query: 285 F--LFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIG 342
F + GT VA + + TS ++ +M+ + ++TP N++ T +
Sbjct: 170 FDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTP-----NEIALFTLLMT 224
Query: 343 LAVAFLVLAVLLKKTDNTSHVHWKGAAEMILAM 375
L + F L V+L +++ + M++A+
Sbjct: 225 LTIIF--LVVILTMYPLAKFLNFNLSIAMLIAL 255
|
Length = 673 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 9e-05
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 224 RNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVE------ 277
R++I + E+V GD++ L GD +PA+ ++ L + ++ +TGE+ VE
Sbjct: 160 AEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLG 219
Query: 278 ---------VNSSQNPFL------FSGTKVADGYARMLATSVGMNTTWG 311
+ + L F GT V G A + + G T +G
Sbjct: 220 AVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFG 268
|
Length = 903 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 2e-04
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 523 VMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEV---AKES 579
V A + P K +++ LK++ V + +G ND AL+E D+G+ IQ V +
Sbjct: 73 VFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGI-CTIQQEGVPERLLLT 131
Query: 580 SDIVILD 586
+D+V+ +
Sbjct: 132 ADVVLKE 138
|
Length = 152 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 5e-04
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 14/153 (9%)
Query: 207 QFDKFSKVSNNIQIDVIRN-GRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVD 265
Q D K ++R G + + E+ GD++ ++ G+ +P++G ++G VD
Sbjct: 93 QADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVD 151
Query: 266 ESSMTGESDHVEVNSSQNPFLFS----GTKVADGYARMLATSVGMNTTWGQMMSQISRDN 321
ES++TGES V S + FS GT+V + ++ T+ T +M++ +
Sbjct: 152 ESAITGESAPVIRESGGD---FSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAE 208
Query: 322 SEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL 354
++TP + L L S GL + FL+ L
Sbjct: 209 RQKTPNEIALTILLS-----GLTLIFLLAVATL 236
|
Length = 681 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 8e-04
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 434 IEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAI 482
+E+NLT+LG I+D + GV +A+E + AG+ + ++TGD TA +I
Sbjct: 711 VENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISI 759
|
Length = 1178 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 819 | |||
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.95 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.92 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.89 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.7 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.56 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.27 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.17 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.99 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.99 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.95 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.93 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.9 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.9 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.89 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.89 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.85 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.84 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.8 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.8 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.76 | |
| PLN02887 | 580 | hydrolase family protein | 98.74 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.71 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.65 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.63 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.62 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.55 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.53 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.52 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.43 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.42 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.41 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.41 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.41 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.26 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.26 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.18 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.08 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.05 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.04 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.03 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.0 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.99 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.99 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.99 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.94 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.87 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.85 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.84 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.59 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.58 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.57 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.55 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.54 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.49 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.45 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.33 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.33 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.19 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.18 | |
| PF12515 | 47 | CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory d | 97.16 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.08 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.07 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.98 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.95 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.94 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.92 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.89 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.87 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.84 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.83 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.73 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.65 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.51 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.38 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.37 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.33 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.3 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.26 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.25 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.22 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 96.22 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.21 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.14 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.1 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.03 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.02 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.98 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.86 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.75 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.74 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.71 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.63 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.58 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.51 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.44 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.44 | |
| PLN02940 | 382 | riboflavin kinase | 95.43 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.18 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.72 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.7 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.47 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.37 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 94.31 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.16 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 94.14 | |
| PLN02811 | 220 | hydrolase | 93.76 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 93.36 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 93.35 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.28 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 93.15 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 92.43 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 92.33 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 92.3 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 92.29 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 92.17 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 92.15 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 92.1 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 92.05 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 91.74 | |
| COG0272 | 667 | Lig NAD-dependent DNA ligase (contains BRCT domain | 91.58 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 91.42 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 91.28 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 90.16 | |
| PLN03017 | 366 | trehalose-phosphatase | 89.76 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 89.58 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 89.53 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 89.52 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 89.35 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 89.07 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 88.37 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 88.16 | |
| PLN02580 | 384 | trehalose-phosphatase | 87.81 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 87.73 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 86.85 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 86.31 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 86.25 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 82.4 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 82.06 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 81.55 |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-182 Score=1515.87 Aligned_cols=786 Identities=51% Similarity=0.825 Sum_probs=733.9
Q ss_pred CCCcccchhhhhhhhhcchhhhhhHHHHH---------------hhhhcccccccCCC-cceeeccCCCCCCccCHhHHH
Q 003452 21 TLNVPTKKWHSAFTKIYCSRTLLSLAEIA---------------KAKKGVNKASRSPS-YTVVNLQHDDESFKIDQTSLV 84 (819)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~ 84 (819)
++.++++|||.|..+++++||++...... ...++++.++.+.. +++| .-++++|+|.
T Consensus 14 ~~~~~~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~r~~~r~~~~~~~a~~~~~~~~~~~e~-------~~~i~~e~l~ 86 (1034)
T KOG0204|consen 14 SSIEALQRWRLAYIVLEASRRFRFGASLKKLRELMEPRRKIRSAVLVSKAAALFIDAGSRTEY-------TLGIGAEELV 86 (1034)
T ss_pred chhhhhhhhhhhhhhcccchhhccccCHHHHHHHHHHHhhhhhhhcccchhhhhhcccccccc-------ccccCHHHHH
Confidence 44899999999999999999875332210 01122222222211 2111 2378999999
Q ss_pred HhcccCChhHHHHhcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHH
Q 003452 85 ELVKMKDLDKLHEFGGIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAV 164 (819)
Q Consensus 85 ~~~~~~~~~~l~~~ggv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~ 164 (819)
++++.+|.+.|+++||++|||++|+||+..||++++++..+||+.||+|++|++++|+||+++|++++|.++++|++||+
T Consensus 87 ~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAv 166 (1034)
T KOG0204|consen 87 KIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAV 166 (1034)
T ss_pred HHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEE
Q 003452 165 LSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICL 244 (819)
Q Consensus 165 ~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l 244 (819)
+|+++|++++|.+++||||++|+++++++++++|++||+|++||++|++++++.+++|+|||++++|++.|||||||+.|
T Consensus 167 vSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~l 246 (1034)
T KOG0204|consen 167 VSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQL 246 (1034)
T ss_pred HHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEe
Confidence 99999999999999999999999999999999999999999999999999989999999999999999999999999999
Q ss_pred ecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCC
Q 003452 245 KIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQ 324 (819)
Q Consensus 245 ~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~ 324 (819)
+.||+|||||++++|++|.+|||+|||||++++|....+|+|+|||++++|+++|+||+||+||+||++|.++.++.+++
T Consensus 247 k~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~ 326 (1034)
T KOG0204|consen 247 KIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEE 326 (1034)
T ss_pred ecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcC
Confidence 99999999999999999999999999999999999889999999999999999999999999999999999999999899
Q ss_pred ChhHHHHHHHHhhHhHHHHHHHHHHHHHHh--------------------------------------------------
Q 003452 325 TPLQARLNKLTSSTGKIGLAVAFLVLAVLL-------------------------------------------------- 354 (819)
Q Consensus 325 tplq~~l~~~a~~~~~~~l~~a~l~~~v~~-------------------------------------------------- 354 (819)
||||.+|+++|..++++|+.+|++++++++
T Consensus 327 tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVT 406 (1034)
T KOG0204|consen 327 TPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVT 406 (1034)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHH
Confidence 999999999999999999999999998876
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 407 LsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~ 486 (1034)
T KOG0204|consen 407 LSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIA 486 (1034)
T ss_pred HHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHh
Confidence
Q ss_pred -----------------------------------------------------------------ccCCCceEEEecchH
Q 003452 355 -----------------------------------------------------------------KKTDNTSHVHWKGAA 369 (819)
Q Consensus 355 -----------------------------------------------------------------~~~~~~~~~~~KGa~ 369 (819)
+.++++.++|||||+
T Consensus 487 ~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAs 566 (1034)
T KOG0204|consen 487 QNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGAS 566 (1034)
T ss_pred hcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChH
Confidence 234444239999999
Q ss_pred HHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCccccc-chhhhhhhcccCcEEEEEEEeeC
Q 003452 370 EMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR-NEKDQKKLIEDNLTLLGLVGIKD 448 (819)
Q Consensus 370 e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~-~~~~~~~~~e~~l~~lG~v~i~D 448 (819)
|++|++|+.++|++|+..+++++.+..+++.|+.||++||||+|+|||++...... ....+++.++.+++++|++|++|
T Consensus 567 EiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkD 646 (1034)
T KOG0204|consen 567 EIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKD 646 (1034)
T ss_pred HHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccC
Confidence 99999999999999999999999999999999999999999999999997554111 11223457889999999999999
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
|+|||++++|+.|++|||+|+|+||||..||++||.+|||..++. +.++++|++|++++++|+++++++++|+||++
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~---d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSS 723 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGG---DFLALEGKEFRELSQEERDKIWPKLRVLARSS 723 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCC---ccceecchhhhhcCHHHHHhhhhhheeeecCC
Confidence 999999999999999999999999999999999999999999754 36899999999999999999999999999999
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQK 608 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k 608 (819)
|.||+.+|+.|+++||+||+||||+||+||||+||||+|||++|||+|||+|||||+||||++|+++++|||++|.||+|
T Consensus 724 P~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqK 803 (1034)
T KOG0204|consen 724 PNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQK 803 (1034)
T ss_pred CchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHH
Q 003452 609 LIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVA 688 (819)
Q Consensus 609 ~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~ 688 (819)
|+||||++|+++++++|++++..+.+||+++||||+|||||+++|||||||||+++||+|+|++|++|||++.||+||++
T Consensus 804 FiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~ 883 (1034)
T KOG0204|consen 804 FLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILG 883 (1034)
T ss_pred hheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccCCc------chhhhHHHHHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHH
Q 003452 689 QALYQRAVLLTLQFRGESIFGVN------KKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVL 762 (819)
Q Consensus 689 ~~~~~~~v~~~l~~~~~~~~~~~------~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~ 762 (819)
|++||++++++++|.|..+|+.. +..++|++||+||+||+||+||+|++++.|+|+++++|++|+.++.+++++
T Consensus 884 qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~ 963 (1034)
T KOG0204|consen 884 QAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVS 963 (1034)
T ss_pred HHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeeh
Confidence 99999999999999999998652 557899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHccccccCChhhHHHHHHHHHHHHHHHHHHhhccCCCCcccchhc
Q 003452 763 QVVMVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLK 816 (819)
Q Consensus 763 ~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~~~~~~~~~~~~ 816 (819)
|+++++|++.+|+++||+|.+|++|+.+|+++|+++.++|++|++..|+..+.+
T Consensus 964 QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~~~~~~~~ 1017 (1034)
T KOG0204|consen 964 QVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSLPKLKYAG 1017 (1034)
T ss_pred hhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheeccccccccceeec
Confidence 999999999999999999999999999999999999999999999988877765
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-128 Score=1086.14 Aligned_cols=695 Identities=31% Similarity=0.511 Sum_probs=625.7
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccc
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEG 179 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~ 179 (819)
.+++.+..|+||+++||+++| +.+|++.||.|+++....+|+|+.+++||.|++..+|+++|++|++++ .
T Consensus 8 ~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~--------~ 77 (972)
T KOG0202|consen 8 SVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA--------D 77 (972)
T ss_pred cHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH--------h
Confidence 588899999999999999988 999999999999999999999999999999999999999999999998 5
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEec
Q 003452 180 WYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDG 259 (819)
Q Consensus 180 ~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g 259 (819)
|.|+++|.+++++++.+..+++|+.++++++|.++.+ ..++|+|+|+.+.++++||||||+|.|+.||+||||.++++.
T Consensus 78 ~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p-~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~ 156 (972)
T KOG0202|consen 78 FDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVP-PMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEA 156 (972)
T ss_pred cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCC-ccceEEecCcccceehhccCCCCEEEEecCCccccceeEEee
Confidence 7789999999999999999999999999999999865 479999999999999999999999999999999999999999
Q ss_pred cceeEecccccCCCceeeecCC------------CCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChh
Q 003452 260 HSLQVDESSMTGESDHVEVNSS------------QNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPL 327 (819)
Q Consensus 260 ~~l~VDES~LTGES~pv~k~~~------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tpl 327 (819)
.+|.+|||+|||||.||.|..+ +.|++|+||.|..|.++++|+.||.+|++|++.+++.+.++++|||
T Consensus 157 ~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPL 236 (972)
T KOG0202|consen 157 KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPL 236 (972)
T ss_pred eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcH
Confidence 9999999999999999999632 4678999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHhHHHHHHHHHHHHHHh-----------------------------------------------------
Q 003452 328 QARLNKLTSSTGKIGLAVAFLVLAVLL----------------------------------------------------- 354 (819)
Q Consensus 328 q~~l~~~a~~~~~~~l~~a~l~~~v~~----------------------------------------------------- 354 (819)
|+++|.+++++..+..++++.++++-.
T Consensus 237 qk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakk 316 (972)
T KOG0202|consen 237 QKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKK 316 (972)
T ss_pred HHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHhh
Confidence 999999999998665555555544311
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 317 naIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l 396 (972)
T KOG0202|consen 317 NAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLL 396 (972)
T ss_pred hhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 397 ~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK 476 (972)
T KOG0202|consen 397 QELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRK 476 (972)
T ss_pred HHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccc
Confidence
Q ss_pred ------ccCCC--ceEEEecchHHHHHHhhhhcccccC-CcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCccccc
Q 003452 355 ------KKTDN--TSHVHWKGAAEMILAMCSSYYDASG-NIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR 425 (819)
Q Consensus 355 ------~~~~~--~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~ 425 (819)
..+.+ +..+|.|||+|.++++|++++..+| +.+||++..|+.+.+...+|+++|||||++|+++.+.....
T Consensus 477 ~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~ 556 (972)
T KOG0202|consen 477 SMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPD 556 (972)
T ss_pred eEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChh
Confidence 11122 3678999999999999988887776 66999999999999999999999999999999987641111
Q ss_pred ----chhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccee
Q 003452 426 ----NEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVL 501 (819)
Q Consensus 426 ----~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi 501 (819)
....++...|+||+|+|++|+.||||++++++|+.|+++||+|+|+||||..||.+||+++||...+.+ -...++
T Consensus 557 ~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed-~~~~~~ 635 (972)
T KOG0202|consen 557 DQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED-VSSMAL 635 (972)
T ss_pred hhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc-cccccc
Confidence 111224557899999999999999999999999999999999999999999999999999999887655 456899
Q ss_pred cccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcC
Q 003452 502 EGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSD 581 (819)
Q Consensus 502 ~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaD 581 (819)
+|++|+++++++..+...+..+|+|++|.+|.++|+.||++|++|||||||+||+||||.||||||||++|||+||+|||
T Consensus 636 TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsD 715 (972)
T KOG0202|consen 636 TGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASD 715 (972)
T ss_pred chhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCC
Q 003452 582 IVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKP 661 (819)
Q Consensus 582 ivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p 661 (819)
+||.||||++|+.++++||.+|+||++|+.|+++.|+.++...++++.+..+.||+|+|+||+|++||.+||.+|+.|||
T Consensus 716 MVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~ 795 (972)
T KOG0202|consen 716 MVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPV 795 (972)
T ss_pred cEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHH---HHHhh-ccccCC---------------------cchhhh
Q 003452 662 TKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLT---LQFRG-ESIFGV---------------------NKKVKE 716 (819)
Q Consensus 662 ~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~---l~~~~-~~~~~~---------------------~~~~~~ 716 (819)
+.++|++||+++++++++...+.+++..++|..+..+. ..+.+ ..-... +.....
T Consensus 796 D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~ 875 (972)
T KOG0202|consen 796 DPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPL 875 (972)
T ss_pred ChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccc
Confidence 99999999999999999999999998888876543322 22221 000000 022345
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHHH--HHHHhHccccccCChhhHHHHHHHHHHH
Q 003452 717 TLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVM--VEFLKNFADTERLNWGQWSACIGFAAAS 794 (819)
Q Consensus 717 T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~--v~~~~~~f~~~~l~~~~w~~~~~~~~~~ 794 (819)
|+.|.+||+..+||.+|||+-+..-+..++|.|+||.+++.+++++|+++ +++++..|+++||++.+|++.+.+++..
T Consensus 876 tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~V 955 (972)
T KOG0202|consen 876 TMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLVLAISSPV 955 (972)
T ss_pred eEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhheecCCcHHHHHHHHHHhhhh
Confidence 89999999999999999999655545559999999999999999998765 5789999999999999999999999999
Q ss_pred HHHHHHHhhccC
Q 003452 795 WPIGWLVKCIPV 806 (819)
Q Consensus 795 ~~~~~~~k~i~~ 806 (819)
+++++++|++.+
T Consensus 956 ~i~dEilK~~~R 967 (972)
T KOG0202|consen 956 IIVDEILKFIAR 967 (972)
T ss_pred hhHHHHHHHHHH
Confidence 999999999874
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-123 Score=1137.23 Aligned_cols=722 Identities=47% Similarity=0.768 Sum_probs=655.3
Q ss_pred CCCccCHhHHHHhccc-CChhHHHHhcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHh
Q 003452 74 ESFKIDQTSLVELVKM-KDLDKLHEFGGIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALK 152 (819)
Q Consensus 74 ~~~~~~~~~l~~~~~~-~~~~~l~~~ggv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~ 152 (819)
++|++..+++.++.+. ++.+.|+++||++++++.|++|.++||+++++++++|+++||+|++++++++++|++++++|+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~ 95 (941)
T TIGR01517 16 DGFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALS 95 (941)
T ss_pred CCCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHh
Confidence 4799999999998866 467889999999999999999999999943344999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhc-----ccCcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCE
Q 003452 153 DLTILILLGCAVLSLAFGIK-----EHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGR 227 (819)
Q Consensus 153 ~~~~~il~v~a~~s~~~g~~-----~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~ 227 (819)
++++++|++++++|+++|+. +.+..++|+|+++|+++++++..++++++|++++++++|++...+.+++|+|||+
T Consensus 96 ~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~ 175 (941)
T TIGR01517 96 DQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQ 175 (941)
T ss_pred CHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCE
Confidence 99999999999999998853 2344568999999999999999999999999999999998765566899999999
Q ss_pred EEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCc
Q 003452 228 RQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMN 307 (819)
Q Consensus 228 ~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~ 307 (819)
+++|+++||||||+|.|++||+|||||++++|+.+.||||+|||||.|+.|.+++.+++|+||.|.+|.++++|++||.+
T Consensus 176 ~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~ 255 (941)
T TIGR01517 176 EQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVN 255 (941)
T ss_pred EEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCC
Confidence 99999999999999999999999999999999777999999999999999997677889999999999999999999999
Q ss_pred ChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHH-----------------------h----------
Q 003452 308 TTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVL-----------------------L---------- 354 (819)
Q Consensus 308 T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~-----------------------~---------- 354 (819)
|++|||++++.+++ +++|+|++++++++++.++++++++++|+++ .
T Consensus 256 T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ll 334 (941)
T TIGR01517 256 SFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIV 334 (941)
T ss_pred cHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHH
Confidence 99999999997754 6789999999999999887766554433211 0
Q ss_pred ------------------------------------------------------------------c-------------
Q 003452 355 ------------------------------------------------------------------K------------- 355 (819)
Q Consensus 355 ------------------------------------------------------------------~------------- 355 (819)
.
T Consensus 335 v~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~ 414 (941)
T TIGR01517 335 VVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVP 414 (941)
T ss_pred HhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCC
Confidence 0
Q ss_pred -------------------c---------------------------------------------------------CCC
Q 003452 356 -------------------K---------------------------------------------------------TDN 359 (819)
Q Consensus 356 -------------------~---------------------------------------------------------~~~ 359 (819)
. +++
T Consensus 415 ~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~ 494 (941)
T TIGR01517 415 KHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGG 494 (941)
T ss_pred HHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCC
Confidence 0 001
Q ss_pred ceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcE
Q 003452 360 TSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLT 439 (819)
Q Consensus 360 ~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~ 439 (819)
++.+++|||||.+++.|+.+.+.+|...++++ .++++.+.+++++++|+|++++||++++.++.+ ..+..|+|++
T Consensus 495 ~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~----~~~~~e~~l~ 569 (941)
T TIGR01517 495 KVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFP----RKDYPNGGLT 569 (941)
T ss_pred cEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccc----cccccccCcE
Confidence 14578999999999999988777888888887 788899999999999999999999998654322 1223478999
Q ss_pred EEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhh
Q 003452 440 LLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVD 519 (819)
Q Consensus 440 ~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~ 519 (819)
|+|+++++||+||+++++|++|+++||+++|+||||+.||.+||++|||.++ ...+++|+++++++++++.+.++
T Consensus 570 ~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~-----~~~vi~G~~~~~l~~~el~~~i~ 644 (941)
T TIGR01517 570 LIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF-----GGLAMEGKEFRRLVYEEMDPILP 644 (941)
T ss_pred EEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCC-----CceEeeHHHhhhCCHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999865 34799999999999999999999
Q ss_pred hhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 003452 520 KICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWG 599 (819)
Q Consensus 520 ~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~g 599 (819)
++.||||++|+||.++|+.||++|++|+|||||+||+||||+||||||||.+|+|+||++||++++||||++|++++++|
T Consensus 645 ~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~g 724 (941)
T TIGR01517 645 KLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWG 724 (941)
T ss_pred cCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcch
Q 003452 600 RCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLIT 679 (819)
Q Consensus 600 R~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~ 679 (819)
|++|+||+|+++|++++|+..+++.+++.++.++.|++++|++|+|+++|.+|+++|++|+|++++|++||++|++++++
T Consensus 725 R~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~ 804 (941)
T TIGR01517 725 RNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLIS 804 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccCCc---------chhhhHHHHHHHHHHHHHHHHhhhccccccccccccchH
Q 003452 680 NIMWRNLVAQALYQRAVLLTLQFRGESIFGVN---------KKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNR 750 (819)
Q Consensus 680 ~~~~~~i~~~~~~~~~v~~~l~~~~~~~~~~~---------~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~ 750 (819)
+.||++++++++++.++.+++++.+..+++.. ....+|++|++|+++|+||.+++|+.+..++|+++++|+
T Consensus 805 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~ 884 (941)
T TIGR01517 805 RSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNR 884 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccH
Confidence 99999999999999988877766655444221 256789999999999999999999976558889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHccccccCChhhHHHHHHHHHHHHHHHHHHhhccC
Q 003452 751 LFLGIIGTTIVLQVVMVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPV 806 (819)
Q Consensus 751 ~~~~~i~~~~~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~~ 806 (819)
+++.++++++++|++++++++.+|++.||++.+|++|++++++.+++.++.|++|+
T Consensus 885 ~~~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 885 IFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999984
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-113 Score=1050.11 Aligned_cols=673 Identities=32% Similarity=0.498 Sum_probs=612.8
Q ss_pred CHHHHHHHhCCCcCCCCC-ccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHH-hhhHHHHHHHHHHHHHHHhhcccCcc
Q 003452 100 GIRGVASALETDFDAGIF-GNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDAL-KDLTILILLGCAVLSLAFGIKEHGLK 177 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~-~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~-~~~~~~il~v~a~~s~~~g~~~~g~~ 177 (819)
.++++++.|++|.++||+ ++| +++|+++||+|+++.|+++++|+.++++| ++|++++|++++++|+++|
T Consensus 8 ~~~~v~~~l~t~~~~GLs~~~e--v~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g------- 78 (884)
T TIGR01522 8 SVEETCSKLQTDLQNGLNSSQE--ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG------- 78 (884)
T ss_pred CHHHHHHHhCcCcccCCCcHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc-------
Confidence 689999999999999999 656 99999999999999998999999999999 9999999999999999998
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEE
Q 003452 178 EGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFL 257 (819)
Q Consensus 178 ~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll 257 (819)
.|.|+++|++++++++.++.+++|+.++++++|.++.+ .+++|+|||++++|+++||||||+|.|++||+|||||+++
T Consensus 79 -~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~-~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii 156 (884)
T TIGR01522 79 -NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVP-PECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIV 156 (884)
T ss_pred -chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCC-CeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEE
Confidence 79999999988898999999999999999999998754 4799999999999999999999999999999999999999
Q ss_pred eccceeEecccccCCCceeeecCCC------------CCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCC
Q 003452 258 DGHSLQVDESSMTGESDHVEVNSSQ------------NPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQT 325 (819)
Q Consensus 258 ~g~~l~VDES~LTGES~pv~k~~~~------------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~t 325 (819)
+|+++.||||+|||||.|+.|.+.. +|++|+||.|.+|.++++|++||.+|++|+|.+++++.+.++|
T Consensus 157 ~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt 236 (884)
T TIGR01522 157 EAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKT 236 (884)
T ss_pred EcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCC
Confidence 9987899999999999999998531 3689999999999999999999999999999999998888899
Q ss_pred hhHHHHHHHHhhHhHHHHHHHHHHHHHHh---------------------------------------------------
Q 003452 326 PLQARLNKLTSSTGKIGLAVAFLVLAVLL--------------------------------------------------- 354 (819)
Q Consensus 326 plq~~l~~~a~~~~~~~l~~a~l~~~v~~--------------------------------------------------- 354 (819)
|+|+.++++++++++++++++++++++.+
T Consensus 237 ~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~ 316 (884)
T TIGR01522 237 PLQKSMDLLGKQLSLVSFGVIGVICLVGWFQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLP 316 (884)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchH
Confidence 99999999999988877654444333211
Q ss_pred -------------------------------cc-----------------------------------------------
Q 003452 355 -------------------------------KK----------------------------------------------- 356 (819)
Q Consensus 355 -------------------------------~~----------------------------------------------- 356 (819)
..
T Consensus 317 a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 396 (884)
T TIGR01522 317 SVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKF 396 (884)
T ss_pred HHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCee
Confidence 00
Q ss_pred ----------C--------------------------------------------CCceEEEecchHHHHHHhhhhcccc
Q 003452 357 ----------T--------------------------------------------DNTSHVHWKGAAEMILAMCSSYYDA 382 (819)
Q Consensus 357 ----------~--------------------------------------------~~~~~~~~KGa~e~il~~c~~~~~~ 382 (819)
+ ++++++++||+||.++..|+.+.+.
T Consensus 397 ~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~ 476 (884)
T TIGR01522 397 RNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKK 476 (884)
T ss_pred cCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhc
Confidence 0 0112467899999999999998877
Q ss_pred cCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHH
Q 003452 383 SGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQ 462 (819)
Q Consensus 383 ~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~ 462 (819)
+|...+++++.++++.+.+++++.+|+|++++||+++ +++++|+|+++++||+|||++++|++|+
T Consensus 477 ~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~---------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~ 541 (884)
T TIGR01522 477 DGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE---------------KGQLTFLGLVGINDPPRPGVKEAVTTLI 541 (884)
T ss_pred CCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC---------------CCCeEEEEEEeccCcchhHHHHHHHHHH
Confidence 7888899999999999999999999999999999875 2578999999999999999999999999
Q ss_pred hcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhC
Q 003452 463 YAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQK 542 (819)
Q Consensus 463 ~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~ 542 (819)
++|++++|+|||++.||.++|+++||... ...+++|+++++++++++.+.++++.||||++|+||.++|+.||++
T Consensus 542 ~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~-----~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~ 616 (884)
T TIGR01522 542 TGGVRIIMITGDSQETAVSIARRLGMPSK-----TSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKR 616 (884)
T ss_pred HCCCeEEEECCCCHHHHHHHHHHcCCCCC-----CCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHC
Confidence 99999999999999999999999999864 3457899999999999999999999999999999999999999999
Q ss_pred CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 543 GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALL 622 (819)
Q Consensus 543 g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~ 622 (819)
|++|+|+|||+||+|||++||||||||.+|+++|+++||++++||||+++++++++||++|+||+|+++|+++.|+..+.
T Consensus 617 g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~ 696 (884)
T TIGR01522 617 GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALS 696 (884)
T ss_pred CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 99999999999999999999999999977999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 623 INFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQF 702 (819)
Q Consensus 623 ~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~ 702 (819)
+.+++.++..+.|++++|+||+|+++|.+|+++|++|||++++|++||++++++++++.||++++.++++++++.+++++
T Consensus 697 ~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 776 (884)
T TIGR01522 697 LIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFV 776 (884)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888889999999999999999999999999999999999999999999999999999999999998877665544
Q ss_pred hhccccCCcchhhhHHHHHHHHHHHHHHHHhhhccccccccc-cccchHHHHHHHHHHHHHHHHHH--HHHhHccccccC
Q 003452 703 RGESIFGVNKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFE-GIHKNRLFLGIIGTTIVLQVVMV--EFLKNFADTERL 779 (819)
Q Consensus 703 ~~~~~~~~~~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~-~~~~n~~~~~~i~~~~~~~~~~v--~~~~~~f~~~~l 779 (819)
.... .+.....++|++|++|+++|+||.+|+|+ ++.++|+ ++++|++++.++++++++|++++ ++++.+|++.||
T Consensus 777 ~~~~-~~~~~~~~~t~~f~~~v~~q~~~~~~~r~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l 854 (884)
T TIGR01522 777 REMQ-DGVITARDTTMTFTCFVFFDMFNALACRS-QTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEAL 854 (884)
T ss_pred HHHc-CCcchhhHHHHHHHHHHHHHHHHHHHHcc-CCccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3211 12123457899999999999999999999 4667776 88999999999999999998776 478999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhhcc
Q 003452 780 NWGQWSACIGFAAASWPIGWLVKCIP 805 (819)
Q Consensus 780 ~~~~w~~~~~~~~~~~~~~~~~k~i~ 805 (819)
++.+|++|++++++.+++.++.|++.
T Consensus 855 ~~~~w~~~~~~~~~~~~~~~~~k~~~ 880 (884)
T TIGR01522 855 SIKDLLFLLLITSSVCIVDEIRKKVE 880 (884)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999875
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-113 Score=1054.41 Aligned_cols=693 Identities=27% Similarity=0.437 Sum_probs=607.4
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccc
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEG 179 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~ 179 (819)
.++.+++.|+|+..+||+++| +++|+++||+|++++++.+++|+.++++|+++++++|++++++|++++ .
T Consensus 11 ~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--------~ 80 (1053)
T TIGR01523 11 IADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--------D 80 (1053)
T ss_pred CHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------h
Confidence 578899999999999999988 999999999999999999999999999999999999999999999987 7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEec
Q 003452 180 WYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDG 259 (819)
Q Consensus 180 ~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g 259 (819)
|+|+++|+++++++..++.+++|+.++++++|+++.. .+++|+|||++++|+++||||||+|.|++||+|||||+++++
T Consensus 81 ~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~-~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~ 159 (1053)
T TIGR01523 81 WIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLAS-PMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIET 159 (1053)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCC-CceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEe
Confidence 9999999999999999999999999999999998754 489999999999999999999999999999999999999999
Q ss_pred cceeEecccccCCCceeeecCC-------------CCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCC----
Q 003452 260 HSLQVDESSMTGESDHVEVNSS-------------QNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNS---- 322 (819)
Q Consensus 260 ~~l~VDES~LTGES~pv~k~~~-------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~---- 322 (819)
++|.||||+|||||.||.|.+. ..|++|+||.|.+|.++++|++||++|++|||.+++.+...
T Consensus 160 ~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~ 239 (1053)
T TIGR01523 160 KNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQR 239 (1053)
T ss_pred CceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhcccc
Confidence 9999999999999999999742 24689999999999999999999999999999998864321
Q ss_pred -------------------------------CCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh-----------------
Q 003452 323 -------------------------------EQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL----------------- 354 (819)
Q Consensus 323 -------------------------------~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~----------------- 354 (819)
.+||||+++++++++++.+++++++++|++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~av~l~Va 319 (1053)
T TIGR01523 240 PEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFDVDKEVAIYAICLAIS 319 (1053)
T ss_pred ccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 25999999999999988887777666554310
Q ss_pred ---------------------------------------------------------------cc---------------
Q 003452 355 ---------------------------------------------------------------KK--------------- 356 (819)
Q Consensus 355 ---------------------------------------------------------------~~--------------- 356 (819)
..
T Consensus 320 ~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~ 399 (1053)
T TIGR01523 320 IIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNP 399 (1053)
T ss_pred HcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCC
Confidence 00
Q ss_pred ---------------------------------------C-------------------------C---C----------
Q 003452 357 ---------------------------------------T-------------------------D---N---------- 359 (819)
Q Consensus 357 ---------------------------------------~-------------------------~---~---------- 359 (819)
+ + +
T Consensus 400 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE 479 (1053)
T TIGR01523 400 NEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTE 479 (1053)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccH
Confidence 0 0 0
Q ss_pred -----------------------------------------------------------------------ceEEEecch
Q 003452 360 -----------------------------------------------------------------------TSHVHWKGA 368 (819)
Q Consensus 360 -----------------------------------------------------------------------~~~~~~KGa 368 (819)
.+.+++|||
T Consensus 480 ~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGA 559 (1053)
T TIGR01523 480 IAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGA 559 (1053)
T ss_pred HHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCC
Confidence 023578999
Q ss_pred HHHHHHhhhhcccccC-CcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccch-----hhhhhhcccCcEEEE
Q 003452 369 AEMILAMCSSYYDASG-NIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNE-----KDQKKLIEDNLTLLG 442 (819)
Q Consensus 369 ~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~-----~~~~~~~e~~l~~lG 442 (819)
||.++++|+.+...+| ...|++++.++++.+.+++|+++|+|||++|||+++.++.... ...++..|+|++|+|
T Consensus 560 pe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G 639 (1053)
T TIGR01523 560 FERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLG 639 (1053)
T ss_pred hHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEE
Confidence 9999999997765455 5779999999999999999999999999999998865322100 011235689999999
Q ss_pred EEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCC-----CCCccceecccccccCCHHHHHHH
Q 003452 443 LVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQ-----DTSTGAVLEGEEFRNYTHEERMEK 517 (819)
Q Consensus 443 ~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~-----~~~~~~vi~g~~~~~~~~~~~~~~ 517 (819)
+++++||+||+++++|++|+++||+|+|+|||++.||.+||++|||..++. +.....+++|++++.++++++.+.
T Consensus 640 ~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~ 719 (1053)
T TIGR01523 640 LIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDL 719 (1053)
T ss_pred EEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHH
Confidence 999999999999999999999999999999999999999999999975421 111357999999999999999999
Q ss_pred hhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 518 VDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 518 ~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
++++.||||++|+||.++|+.+|++|++|+|||||+||+|||++||||||||.+|+|+||++||++++||||++|+++++
T Consensus 720 ~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~ 799 (1053)
T TIGR01523 720 KALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIE 799 (1053)
T ss_pred hhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C--CCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCC
Q 003452 598 WGRCVHTNIQKLIQFQLTANVAALLINFVAAVYA---G--EIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVG 672 (819)
Q Consensus 598 ~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~---~--~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~ 672 (819)
+||++|+||+|+++|.++.|+..+++.+++.++. + +.||+++|+||+|+++|.+|+++|++|||++++|++||+.
T Consensus 800 ~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~ 879 (1053)
T TIGR01523 800 EGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHD 879 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCC
Confidence 9999999999999999999999999999888774 2 4799999999999999999999999999999999999999
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHH---hhc--cc-c-------CC---cchhhhHHHHHHHHHHHHHHHHhhhc
Q 003452 673 RTEPLITNIMWRNLVAQALYQRAVLLTLQF---RGE--SI-F-------GV---NKKVKETLIFNTFVLCQVFNEFNARK 736 (819)
Q Consensus 673 r~~~li~~~~~~~i~~~~~~~~~v~~~l~~---~~~--~~-~-------~~---~~~~~~T~~f~~~v~~q~~n~~~~r~ 736 (819)
++++++++.+++.++..++++.+..+..++ ++. .. . +. +...++|+.|.+++++|+++.+++|+
T Consensus 880 ~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~ 959 (1053)
T TIGR01523 880 NEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKD 959 (1053)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999998887766554332 211 00 0 00 12357899999999999999999998
Q ss_pred cccccccc----------------cccchHHHHHHHHHHHHHHHHH--HHHHhH-ccccccCChhhHHHHHHHHHHHHHH
Q 003452 737 LEKKNVFE----------------GIHKNRLFLGIIGTTIVLQVVM--VEFLKN-FADTERLNWGQWSACIGFAAASWPI 797 (819)
Q Consensus 737 ~~~~~~~~----------------~~~~n~~~~~~i~~~~~~~~~~--v~~~~~-~f~~~~l~~~~w~~~~~~~~~~~~~ 797 (819)
.+ .++|+ +.++|+++++++++++++|+++ +++++. +|++.|+++ +|+++++++++.+++
T Consensus 960 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~ 1037 (1053)
T TIGR01523 960 FD-NSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFG 1037 (1053)
T ss_pred Cc-hhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHH
Confidence 54 33332 3689999999999988888655 567875 999999997 899999999999999
Q ss_pred HHHHhhcc
Q 003452 798 GWLVKCIP 805 (819)
Q Consensus 798 ~~~~k~i~ 805 (819)
.++.|++.
T Consensus 1038 ~e~~K~~~ 1045 (1053)
T TIGR01523 1038 AEIWKCGK 1045 (1053)
T ss_pred HHHHHHHH
Confidence 99999875
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-111 Score=1040.18 Aligned_cols=702 Identities=26% Similarity=0.387 Sum_probs=609.7
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcc-----c
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKE-----H 174 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~-----~ 174 (819)
.++++++.|+++..+||+++| +++|+++||+|++++++++++|+.++++|++|+.++|+++++++++..... +
T Consensus 21 ~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~ 98 (997)
T TIGR01106 21 SLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEE 98 (997)
T ss_pred CHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCC
Confidence 688999999999999999988 999999999999999899999999999999999999999999987653221 1
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccce
Q 003452 175 GLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANG 254 (819)
Q Consensus 175 g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg 254 (819)
.....|++++.+++++++...++.++++++++..+++.++. +.+++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 99 ~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~-~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~ 177 (997)
T TIGR01106 99 PQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMV-PQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADL 177 (997)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeE
Confidence 12246999998888888888889999999999999998864 35899999999999999999999999999999999999
Q ss_pred EEEeccceeEecccccCCCceeeecCCC--------CCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCCh
Q 003452 255 LFLDGHSLQVDESSMTGESDHVEVNSSQ--------NPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTP 326 (819)
Q Consensus 255 ~ll~g~~l~VDES~LTGES~pv~k~~~~--------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 326 (819)
++++|+++.||||+|||||.|+.|.+.. .+++|+||.|.+|.++++|++||.+|++|++.+++++.+.+++|
T Consensus 178 ~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~p 257 (997)
T TIGR01106 178 RIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTP 257 (997)
T ss_pred EEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCCc
Confidence 9999988899999999999999997531 25899999999999999999999999999999999888888999
Q ss_pred hHHHHHHHHhhHhHHHHHHHHHHHHHHh----------------------------------------------------
Q 003452 327 LQARLNKLTSSTGKIGLAVAFLVLAVLL---------------------------------------------------- 354 (819)
Q Consensus 327 lq~~l~~~a~~~~~~~l~~a~l~~~v~~---------------------------------------------------- 354 (819)
+|+++++++++++.+++++++++++++.
T Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~a 337 (997)
T TIGR01106 258 IAIEIEHFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEA 337 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHH
Confidence 9999999999999888777776655432
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 338 iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~ 417 (997)
T TIGR01106 338 VETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPIL 417 (997)
T ss_pred HHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCccc
Confidence
Q ss_pred --------------------------------------------------c--cC-CCceEEEecchHHHHHHhhhhccc
Q 003452 355 --------------------------------------------------K--KT-DNTSHVHWKGAAEMILAMCSSYYD 381 (819)
Q Consensus 355 --------------------------------------------------~--~~-~~~~~~~~KGa~e~il~~c~~~~~ 381 (819)
. +. ++.+.+++|||||.++++|+++.
T Consensus 418 ~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~- 496 (997)
T TIGR01106 418 KRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL- 496 (997)
T ss_pred ccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHh-
Confidence 0 00 01245789999999999999876
Q ss_pred ccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccch----hhhhhhcccCcEEEEEEEeeCCCCccHHHH
Q 003452 382 ASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNE----KDQKKLIEDNLTLLGLVGIKDPCRPGVKKA 457 (819)
Q Consensus 382 ~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~----~~~~~~~e~~l~~lG~v~i~D~lr~~v~~a 457 (819)
.+|...+++++.++.+.+.+++++++|+|++++|||.++.++.... ..+.+..|+|++|+|+++++||+||+++++
T Consensus 497 ~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~a 576 (997)
T TIGR01106 497 IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDA 576 (997)
T ss_pred cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHH
Confidence 5789999999999999999999999999999999998865432210 011123488999999999999999999999
Q ss_pred HHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC-------------------CCccceecccccccCCHHHHHHHh
Q 003452 458 VEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD-------------------TSTGAVLEGEEFRNYTHEERMEKV 518 (819)
Q Consensus 458 I~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~-------------------~~~~~vi~g~~~~~~~~~~~~~~~ 518 (819)
|++|+++||+|+|+|||+..||.++|+++|+..++.. .+...+++|++++.++++++.+.+
T Consensus 577 I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~ 656 (997)
T TIGR01106 577 VGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEIL 656 (997)
T ss_pred HHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHH
Confidence 9999999999999999999999999999999764321 012379999999999999999999
Q ss_pred hhhc--eeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 519 DKIC--VMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 519 ~~~~--v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
+++. ||||++|+||.++|+.+|+.|++|+|+|||+||+||||+||||||||.+|+|+||++||++++||||++|++++
T Consensus 657 ~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai 736 (997)
T TIGR01106 657 KYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGV 736 (997)
T ss_pred HhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHH
Confidence 8875 99999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCC-CC
Q 003452 597 RWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGR-TE 675 (819)
Q Consensus 597 ~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r-~~ 675 (819)
++||++|.|++++++|+++.|+..+++.+++.++..+.|++++|+||+|+++|++|+++|++|||++++|++||+++ ..
T Consensus 737 ~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~ 816 (997)
T TIGR01106 737 EEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTD 816 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999985 67
Q ss_pred CcchHHHHHHHH-HHHHHHHHHHHHHHHh-----hc---cccCC---------c------------------chhhhHHH
Q 003452 676 PLITNIMWRNLV-AQALYQRAVLLTLQFR-----GE---SIFGV---------N------------------KKVKETLI 719 (819)
Q Consensus 676 ~li~~~~~~~i~-~~~~~~~~v~~~l~~~-----~~---~~~~~---------~------------------~~~~~T~~ 719 (819)
+++++.++..++ ..++++.+..++.++. |. ..+++ + ....+|++
T Consensus 817 ~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 896 (997)
T TIGR01106 817 KLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAF 896 (997)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhhhhHHH
Confidence 899998876643 3354554433332221 10 11111 0 01468999
Q ss_pred HHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHHH--HHHHhHccccccCChhhHHHHHHHHHHHHHH
Q 003452 720 FNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVM--VEFLKNFADTERLNWGQWSACIGFAAASWPI 797 (819)
Q Consensus 720 f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~--v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~ 797 (819)
|++++++|+||.+|||+ ++.++|+..++|++++.++++.+++++++ +++++.+|++.|+++.+|++|++++++.+++
T Consensus 897 f~~~v~~q~~~~~~~R~-~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~ 975 (997)
T TIGR01106 897 FVSIVVVQWADLIICKT-RRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVY 975 (997)
T ss_pred HHHHHHHHHHHHHHhcc-CcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 56677865489999999888888877654 4567999999999999999999999999999
Q ss_pred HHHHhhccC
Q 003452 798 GWLVKCIPV 806 (819)
Q Consensus 798 ~~~~k~i~~ 806 (819)
.++.|++..
T Consensus 976 ~~~~k~~~r 984 (997)
T TIGR01106 976 DEIRKLIIR 984 (997)
T ss_pred HHHHHHHHH
Confidence 999998764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-110 Score=1015.96 Aligned_cols=680 Identities=23% Similarity=0.335 Sum_probs=584.4
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcc---cCc
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKE---HGL 176 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~---~g~ 176 (819)
..+.+++.|+++ .+|||++| +++|+++||+|++++++++++|+.++++|++|+.++|++++++|++++.+. ++.
T Consensus 31 ~~~~v~~~l~~~-~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 107 (903)
T PRK15122 31 SLEETLANLNTH-RQGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGE 107 (903)
T ss_pred CHHHHHHHhCCC-CCCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCc
Confidence 577888899998 48999988 999999999999999999999999999999999999999999999987542 222
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeC------CEEEEEecCccccCCEEEEecCCee
Q 003452 177 KEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRN------GRRQQISIFEIVVGDVICLKIGDQV 250 (819)
Q Consensus 177 ~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~Rd------G~~~~i~~~~LvvGDiV~l~~Gd~V 250 (819)
...|.+++.|+++++++..++.+++|+.+++.++|.++.+ ..++|+|| |++++|+++||||||+|.|++||+|
T Consensus 108 ~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~-~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 108 ETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVR-TTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 3469999999999999999999999999999999998764 47999999 4899999999999999999999999
Q ss_pred ccceEEEeccceeEecccccCCCceeeecCC---------------------CCCeEeeccccccceEEEEEEEeCCcCh
Q 003452 251 PANGLFLDGHSLQVDESSMTGESDHVEVNSS---------------------QNPFLFSGTKVADGYARMLATSVGMNTT 309 (819)
Q Consensus 251 PaDg~ll~g~~l~VDES~LTGES~pv~k~~~---------------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~ 309 (819)
||||++++|+++.||||+|||||.||.|.+. .+|++|+||.|.+|+++++|++||.+|+
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 9999999999989999999999999999741 2478999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh-----------------------------------
Q 003452 310 WGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL----------------------------------- 354 (819)
Q Consensus 310 ~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~----------------------------------- 354 (819)
+|||.+++.+ ...++|+|++++++++++..+++.++.+++++..
T Consensus 267 ~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~ 345 (903)
T PRK15122 267 FGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAK 345 (903)
T ss_pred hhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 9999999976 6678999999999998776665554444332210
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 346 g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~~~~~l~~a~l~s~~~~~~~~p~e~All~ 425 (903)
T PRK15122 346 GAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVA 425 (903)
T ss_pred HHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCChHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence
Q ss_pred ---------------------------------ccCCCceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHH
Q 003452 355 ---------------------------------KKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQII 401 (819)
Q Consensus 355 ---------------------------------~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i 401 (819)
...++++.+++||+||.++++|+++.. +|...+++++.++++.+.+
T Consensus 426 ~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~ 504 (903)
T PRK15122 426 FAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERLLALA 504 (903)
T ss_pred HHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHHHHHH
Confidence 001234567899999999999997654 6778899999999999999
Q ss_pred HHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHH
Q 003452 402 QGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKA 481 (819)
Q Consensus 402 ~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~ 481 (819)
+.++.+|+|++++|||+++.++... ......|+|++|+|+++++||+|||++++|++|+++||+|+|+||||+.||.+
T Consensus 505 ~~~a~~G~rvlavA~k~~~~~~~~~--~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~a 582 (903)
T PRK15122 505 EAYNADGFRVLLVATREIPGGESRA--QYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAK 582 (903)
T ss_pred HHHHhCCCEEEEEEEeccCcccccc--ccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 9999999999999999886532110 01123578999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhh
Q 003452 482 IATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKE 561 (819)
Q Consensus 482 iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~ 561 (819)
||+++||.. ..+++|++++.++++++.+.++++.||||++|+||.++|+.||++|++|||||||+||+||||+
T Consensus 583 IA~~lGI~~-------~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ 655 (903)
T PRK15122 583 ICREVGLEP-------GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655 (903)
T ss_pred HHHHcCCCC-------CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHh
Confidence 999999953 3589999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHH
Q 003452 562 TDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQL 641 (819)
Q Consensus 562 AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~ql 641 (819)
|||||||| +|+|+||++||+||+||||++|++++++||++|+||+|+++|.++.|+..++..+++.++..+.|++++|+
T Consensus 656 ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qi 734 (903)
T PRK15122 656 ADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHL 734 (903)
T ss_pred CCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHH
Confidence 99999999 99999999999999999999999999999999999999999999999999888888777777799999999
Q ss_pred HHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcc--hhhhHHH
Q 003452 642 LWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNK--KVKETLI 719 (819)
Q Consensus 642 l~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~~~~~~~~--~~~~T~~ 719 (819)
||+|+++|+ |+++|++|||++++| +||++|+++++++.|+...+..+++.+..++++++ ... .+... ...+|..
T Consensus 735 l~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~t~~ 810 (903)
T PRK15122 735 LLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWF-VFA-ANSVEMQALFQSGW 810 (903)
T ss_pred HHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-cCcHhhhhhhHHHH
Confidence 999999995 899999999999999 99999999999998886444444444333332221 111 11111 1345888
Q ss_pred HHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHHH--HHH--HhHccccccCChhhHHHHHHHHHHHH
Q 003452 720 FNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVM--VEF--LKNFADTERLNWGQWSACIGFAAASW 795 (819)
Q Consensus 720 f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~--v~~--~~~~f~~~~l~~~~w~~~~~~~~~~~ 795 (819)
|.+++++|++|.+++|+- +.+ +|+|++.+..+.+++++|+++ +++ ++.+|++.|+++.+|+++++++++.+
T Consensus 811 f~~l~~~q~~~~~~~R~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~ 885 (903)
T PRK15122 811 FIEGLLSQTLVVHMLRTQ-KIP----FIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYC 885 (903)
T ss_pred HHHHHHHHHHHHHhhCcC-CCC----cCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999984 223 345666555566666666544 455 78999999999999999999999999
Q ss_pred HHHHHHhhc
Q 003452 796 PIGWLVKCI 804 (819)
Q Consensus 796 ~~~~~~k~i 804 (819)
++.++.|.+
T Consensus 886 ~~~e~~k~~ 894 (903)
T PRK15122 886 LVAQGMKRF 894 (903)
T ss_pred HHHHHHHHH
Confidence 888888854
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-109 Score=1006.11 Aligned_cols=667 Identities=24% Similarity=0.341 Sum_probs=573.9
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccc
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEG 179 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~ 179 (819)
..+.+.+.|+++. +|||++| +++|+++||+|.++.++++++|+.++++|++|++++|++++++|+++| .
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~ 121 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------D 121 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------c
Confidence 5788889999986 6999988 999999999999999999999999999999999999999999999887 7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeC------CEEEEEecCccccCCEEEEecCCeeccc
Q 003452 180 WYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRN------GRRQQISIFEIVVGDVICLKIGDQVPAN 253 (819)
Q Consensus 180 ~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~Rd------G~~~~i~~~~LvvGDiV~l~~Gd~VPaD 253 (819)
|++++.|++++++...++.+++++.+++.++|.++.+ .+++|+|| |++++|+++||||||+|.|++||+||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~-~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVS-NTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 9999999999999999999999999999999998865 47999999 7899999999999999999999999999
Q ss_pred eEEEeccceeEecccccCCCceeeecCCC-----------CCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCC
Q 003452 254 GLFLDGHSLQVDESSMTGESDHVEVNSSQ-----------NPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNS 322 (819)
Q Consensus 254 g~ll~g~~l~VDES~LTGES~pv~k~~~~-----------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 322 (819)
|++++|+++.||||+|||||.||.|.+.. +|++|+||.|.+|+++++|++||.+|++|||.+++.+.+.
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999998899999999999999998532 3589999999999999999999999999999999998888
Q ss_pred CCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh------------------------------------------------
Q 003452 323 EQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL------------------------------------------------ 354 (819)
Q Consensus 323 ~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~------------------------------------------------ 354 (819)
++||+|+.++++++++..++++++.++++++.
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk 360 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVK 360 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEe
Confidence 99999999999999988877777666554321
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 361 ~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~ 440 (902)
T PRK10517 361 RLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASR 440 (902)
T ss_pred cchhhhhccCCCEEEecCCCccccceEEEEEEecCCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhc
Confidence
Q ss_pred --------c------------cCCCceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeee
Q 003452 355 --------K------------KTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAF 414 (819)
Q Consensus 355 --------~------------~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~ 414 (819)
+ ..++...+++||++|.++++|+.+.. +|...+++++.++++.+..+.++.+|+|++++
T Consensus 441 ~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlav 519 (902)
T PRK10517 441 WQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRH-NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAV 519 (902)
T ss_pred CceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 0 00112357899999999999998754 67778999999999999999999999999999
Q ss_pred ecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC
Q 003452 415 AHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD 494 (819)
Q Consensus 415 a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~ 494 (819)
|||+++.++.. .....|+|++|+|+++++||+||+++++|++|+++||+|+|+||||+.||.+||+++||..
T Consensus 520 A~k~~~~~~~~----~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~---- 591 (902)
T PRK10517 520 ATKYLPAREGD----YQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA---- 591 (902)
T ss_pred EEecCCccccc----cccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----
Confidence 99987653211 1112378999999999999999999999999999999999999999999999999999953
Q ss_pred CCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChH
Q 003452 495 TSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTE 574 (819)
Q Consensus 495 ~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~ 574 (819)
..+++|+++++++++++.+.++++.||||++|+||.++|+.||++|++|+|||||+||+||||+|||||||| +|+|
T Consensus 592 ---~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtd 667 (902)
T PRK10517 592 ---GEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVD 667 (902)
T ss_pred ---cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCH
Confidence 368999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHh
Q 003452 575 VAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGAL 654 (819)
Q Consensus 575 ~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~al 654 (819)
+||++||+||+||||++|++++++||++|+||+|+++|.++.|+..++..+++.++..+.||+|+|+||+|+++| ++++
T Consensus 668 vAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~ 746 (902)
T PRK10517 668 IAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQV 746 (902)
T ss_pred HHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHH
Confidence 999999999999999999999999999999999999999999999999888887776668999999999999999 6899
Q ss_pred hhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcc----hhhhHHHHHHHHHHHHHH
Q 003452 655 ALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNK----KVKETLIFNTFVLCQVFN 730 (819)
Q Consensus 655 al~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~~~~~~~~----~~~~T~~f~~~v~~q~~n 730 (819)
+|++|||++++|++||+ |+...+.+.|+...+..+++.+..++++++ . ++... ...+|..|.+++++|+++
T Consensus 747 al~~d~~~~~~m~~p~r-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~F~~~~~~q~~~ 821 (902)
T PRK10517 747 AIPFDNVDDEQIQKPQR-WNPADLGRFMVFFGPISSIFDILTFCLMWW-V---FHANTPETQTLFQSGWFVVGLLSQTLI 821 (902)
T ss_pred hhcCCCCChhhhcCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H---ccccchhhHhHHHHHHHHHHHHHHHHH
Confidence 99999999999999987 344445555544433333333333222221 1 12111 234456699999999999
Q ss_pred HHhhhccccccccccccchHHHHHHHHHHHHHHHHH--HH--HHhHccccccCC--hhhHHHHHHHHHHHHHHHHHHhhc
Q 003452 731 EFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVM--VE--FLKNFADTERLN--WGQWSACIGFAAASWPIGWLVKCI 804 (819)
Q Consensus 731 ~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~--v~--~~~~~f~~~~l~--~~~w~~~~~~~~~~~~~~~~~k~i 804 (819)
.+++|+.+ . ++|+|++.+..++.+++++++. ++ +++.+|++.||+ +..|++++.++.. ++.++.|-+
T Consensus 822 ~~~~R~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~ 894 (902)
T PRK10517 822 VHMIRTRR-I----PFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGF 894 (902)
T ss_pred HHhhccCC-C----CcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHH
Confidence 99999842 2 4567777777777777776544 34 578899999999 7888888777766 556666654
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-109 Score=1002.49 Aligned_cols=670 Identities=24% Similarity=0.327 Sum_probs=575.9
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccc
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEG 179 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~ 179 (819)
.++++++.|+++. +||+++| +++|+++||+|.+++++++++|+.++++|++|++++|++++++|++.+ .
T Consensus 19 ~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~--------~ 87 (867)
T TIGR01524 19 GKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD--------D 87 (867)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------h
Confidence 6889999999985 6999988 999999999999999988999999999999999999999999999887 7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEe------CCEEEEEecCccccCCEEEEecCCeeccc
Q 003452 180 WYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIR------NGRRQQISIFEIVVGDVICLKIGDQVPAN 253 (819)
Q Consensus 180 ~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R------dG~~~~i~~~~LvvGDiV~l~~Gd~VPaD 253 (819)
|++++.|+++++++..++.+++++.+++.++|+++.+ ..++|+| ||++++|+++||||||+|.|++||+||||
T Consensus 88 ~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~-~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 88 LEATVIIALMVLASGLLGFIQESRAERAAYALKNMVK-NTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcc-CeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 9999999999999999999999999999999998755 4799999 99999999999999999999999999999
Q ss_pred eEEEeccceeEecccccCCCceeeecCCC-----------CCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCC
Q 003452 254 GLFLDGHSLQVDESSMTGESDHVEVNSSQ-----------NPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNS 322 (819)
Q Consensus 254 g~ll~g~~l~VDES~LTGES~pv~k~~~~-----------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 322 (819)
|++++|+++.||||+|||||.||+|.+.. ++++|+||.|.+|.++++|++||.+|++|||.+++.+ ..
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~~ 245 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-RR 245 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-CC
Confidence 99999998999999999999999998532 3689999999999999999999999999999999987 77
Q ss_pred CCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh------------------------------------------------
Q 003452 323 EQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL------------------------------------------------ 354 (819)
Q Consensus 323 ~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~------------------------------------------------ 354 (819)
+++|+|+.++++++++.++++++++++++++.
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk 325 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVK 325 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEc
Confidence 78999999999999998888777766654321
Q ss_pred ----------------------------------------------------------------------c---------
Q 003452 355 ----------------------------------------------------------------------K--------- 355 (819)
Q Consensus 355 ----------------------------------------------------------------------~--------- 355 (819)
.
T Consensus 326 ~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~ 405 (867)
T TIGR01524 326 ELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASR 405 (867)
T ss_pred cchhhhhccCccEEEecCCCccccCeEEEEEEecCCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhc
Confidence 0
Q ss_pred ---------------------cCCCceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeee
Q 003452 356 ---------------------KTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAF 414 (819)
Q Consensus 356 ---------------------~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~ 414 (819)
..++...+++||+||.++++|+++.. +|...+++++.++++.+.++.++.+|+|++++
T Consensus 406 ~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlav 484 (867)
T TIGR01524 406 WKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRF-GGAVVTLSESEKSELQDMTAEMNRQGIRVIAV 484 (867)
T ss_pred CceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhc-CCceecCCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 00011456899999999999997744 67778899988999999999999999999999
Q ss_pred ecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC
Q 003452 415 AHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD 494 (819)
Q Consensus 415 a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~ 494 (819)
|||+++.++.. .....|++++|+|+++++||+|||++++|++|+++||+++|+||||+.||.+||+++||..
T Consensus 485 A~~~~~~~~~~----~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~---- 556 (867)
T TIGR01524 485 ATKTLKVGEAD----FTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA---- 556 (867)
T ss_pred EEeccCccccc----ccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----
Confidence 99988653211 1112368999999999999999999999999999999999999999999999999999964
Q ss_pred CCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChH
Q 003452 495 TSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTE 574 (819)
Q Consensus 495 ~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~ 574 (819)
..+++|.++++++++++.+.++++.||||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||| +|+|
T Consensus 557 ---~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtd 632 (867)
T TIGR01524 557 ---NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAAD 632 (867)
T ss_pred ---CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccH
Confidence 258999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHh
Q 003452 575 VAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGAL 654 (819)
Q Consensus 575 ~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~al 654 (819)
+||++||+||+||||++|++++++||++|+||+|+++|+++.|+..++..+++.++..+.||+++|+||+|+++| +|++
T Consensus 633 vAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~ 711 (867)
T TIGR01524 633 IAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQL 711 (867)
T ss_pred HHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHH
Confidence 999999999999999999999999999999999999999999999998888887777679999999999999999 7999
Q ss_pred hhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccccCC-cchhhhHHHHHHHHHHHHHHHHh
Q 003452 655 ALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGV-NKKVKETLIFNTFVLCQVFNEFN 733 (819)
Q Consensus 655 al~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~~~~~~-~~~~~~T~~f~~~v~~q~~n~~~ 733 (819)
+|++|||++++|++||+ ++++.+.+.++..-+..+++.+..++++++.+. ..+. .....+|..|.+++++|++|.++
T Consensus 712 al~~~~~~~~~m~~p~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~t~~f~~~~~~~~~~~~~ 789 (867)
T TIGR01524 712 TLPWDKMDREFLKKPHQ-WEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFS-ANTVEEQALFQSGWFVVGLLSQTLVVHM 789 (867)
T ss_pred hhcCCCCChHhhCCCCC-CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccchhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999987666 777655555544333333322222222222111 0010 11234788899999999999999
Q ss_pred hhccccccccccccchHHHHHHHHHHHHHHHHHH--HH--HhHccccccC--ChhhHHHHHHHHHHHHHHHHHHhhcc
Q 003452 734 ARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMV--EF--LKNFADTERL--NWGQWSACIGFAAASWPIGWLVKCIP 805 (819)
Q Consensus 734 ~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~v--~~--~~~~f~~~~l--~~~~w~~~~~~~~~~~~~~~~~k~i~ 805 (819)
+|+.+ . ++|+|++.+..++++++++++++ ++ ++.+|++.|+ ++..|++++.+++. ++.++.|.+-
T Consensus 790 ~R~~~-~----~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~ 860 (867)
T TIGR01524 790 IRTEK-I----PFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFY 860 (867)
T ss_pred hCcCC-C----CcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 99742 2 45678888888888888886654 34 3789999987 56678887777665 5677777553
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-108 Score=995.17 Aligned_cols=671 Identities=34% Similarity=0.519 Sum_probs=600.6
Q ss_pred HHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccch--
Q 003452 103 GVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGW-- 180 (819)
Q Consensus 103 gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~-- 180 (819)
.+...+.++...||+++| +.+|++.||.|++++.+..++|+.++.+|++++..+|++++++|++++ .|
T Consensus 32 ~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~--------~~~~ 101 (917)
T COG0474 32 ELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG--------DWVD 101 (917)
T ss_pred hHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------cccc
Confidence 567788899999999976 999999999999999999999999999999999999999999999998 45
Q ss_pred --hhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEe
Q 003452 181 --YEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLD 258 (819)
Q Consensus 181 --~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~ 258 (819)
.+...|+..++++.++...++|++++..++|.++. ..+++|+|||++++|+++||||||+|.+++||+||||+++++
T Consensus 102 ~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~ 180 (917)
T COG0474 102 AGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLE 180 (917)
T ss_pred cCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEE
Confidence 45567788888888999999999999999999886 458999999999999999999999999999999999999999
Q ss_pred ccceeEecccccCCCceeeecC------------CCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCCh
Q 003452 259 GHSLQVDESSMTGESDHVEVNS------------SQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTP 326 (819)
Q Consensus 259 g~~l~VDES~LTGES~pv~k~~------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 326 (819)
++++.||||+|||||.|++|.+ +.++++|+||.|.+|.++++|++||++|+.|+++.++......+||
T Consensus 181 ~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~ 260 (917)
T COG0474 181 SSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTP 260 (917)
T ss_pred ecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCc
Confidence 9999999999999999999973 3478999999999999999999999999999999999877678999
Q ss_pred hHHHHHHHHhhHhHHHHHHHHHHHHHHh----------------------------------------------------
Q 003452 327 LQARLNKLTSSTGKIGLAVAFLVLAVLL---------------------------------------------------- 354 (819)
Q Consensus 327 lq~~l~~~a~~~~~~~l~~a~l~~~v~~---------------------------------------------------- 354 (819)
+|+++++++.++..++++++++++++..
T Consensus 261 l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~ 340 (917)
T COG0474 261 LQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLN 340 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccc
Confidence 9999999999999999998888877642
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 341 avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al 420 (917)
T COG0474 341 AIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGAL 420 (917)
T ss_pred hhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHH
Confidence
Q ss_pred ---------------------------------------ccCCCceEEEecchHHHHHHhhhhcccccCCcccCCHHHHH
Q 003452 355 ---------------------------------------KKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKE 395 (819)
Q Consensus 355 ---------------------------------------~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~ 395 (819)
+.+++++.+++|||||.++++|+.. |...+++++.++
T Consensus 421 ~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~ 496 (917)
T COG0474 421 VEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLR 496 (917)
T ss_pred HHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc----CcccccCHHHHH
Confidence 0112225578999999999999976 788899999999
Q ss_pred HHHHHHHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCC
Q 003452 396 RFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDN 475 (819)
Q Consensus 396 ~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~ 475 (819)
.+.+..++|+++|||++++|||..+..+... ..+..|+|++|+|+++|+||||+|++++|+.|++|||++||+||||
T Consensus 497 ~~~~~~~~la~~glRvla~A~k~~~~~~~~~---~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~ 573 (917)
T COG0474 497 TLEEAVKELASEGLRVLAVAYKKLDRAEKDD---EVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDH 573 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcccccc---hhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCC
Confidence 9999999999999999999999776543221 1156899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCC
Q 003452 476 VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTND 555 (819)
Q Consensus 476 ~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND 555 (819)
+.||++||++||+..+... ..+++|.+++.++++|+.+.++++.||||+||+||.++|+.||++|++|+|||||+||
T Consensus 574 ~~TA~aIa~~~Gi~~~~~~---~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvND 650 (917)
T COG0474 574 VETAIAIAKECGIEAEAES---ALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVND 650 (917)
T ss_pred HHHHHHHHHHcCCCCCCCc---eeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchh
Confidence 9999999999999875311 5699999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-C
Q 003452 556 APALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGE-I 634 (819)
Q Consensus 556 ~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~-~ 634 (819)
+||||+||||||||++|+|+||++||+++.||||..+..++++||++|.|++|++.|.++.|+..+++.+++.++..+ .
T Consensus 651 apALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~ 730 (917)
T COG0474 651 APALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFL 730 (917)
T ss_pred HHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999998999999999999999999999999999999999999999999999999999999998888777 9
Q ss_pred chhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCc---
Q 003452 635 PLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVN--- 711 (819)
Q Consensus 635 pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~~~~~~~--- 711 (819)
|++++|+||+|+++|.+|+++|+.++|+.+.|++||+++.++++++..++.++.+..++.+++.++.|....+....
T Consensus 731 p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~ 810 (917)
T COG0474 731 PLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTL 810 (917)
T ss_pred cHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999999999999999999999999999999999999999999999999877777777766655444333222111
Q ss_pred -----chhhhHHHHHHHHHHHHHHHHhhhccccccccc-cccchHHHHHHHHHHHHHHHHHHH--HHh-HccccccCChh
Q 003452 712 -----KKVKETLIFNTFVLCQVFNEFNARKLEKKNVFE-GIHKNRLFLGIIGTTIVLQVVMVE--FLK-NFADTERLNWG 782 (819)
Q Consensus 712 -----~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~-~~~~n~~~~~~i~~~~~~~~~~v~--~~~-~~f~~~~l~~~ 782 (819)
.....|+.|++++++|.++.+++|.. ..+++. +++.|+.++++++++++++++.+. ++. ..|.+.|++..
T Consensus 811 ~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~ 889 (917)
T COG0474 811 GLDLFQALLQTTAFTVLVLIQLLLTLAVRSR-GRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLF 889 (917)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCcHH
Confidence 45688999999999999999999984 455665 568999999999998888877653 455 68999999999
Q ss_pred hHHHHHHHHHHHH
Q 003452 783 QWSACIGFAAASW 795 (819)
Q Consensus 783 ~w~~~~~~~~~~~ 795 (819)
+|++++.+.....
T Consensus 890 ~~~~~~~~~~~~~ 902 (917)
T COG0474 890 EWLIAIAVALLLL 902 (917)
T ss_pred HHHHHHHHHHHHH
Confidence 9998887774443
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-104 Score=971.23 Aligned_cols=655 Identities=31% Similarity=0.505 Sum_probs=579.1
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHhhcccCcc--cchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEe
Q 003452 147 VVDALKDLTILILLGCAVLSLAFGIKEHGLK--EGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIR 224 (819)
Q Consensus 147 ~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~--~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~R 224 (819)
++++|++|++++|++++++|+++++..++.. ..|+|++.|+++++++..++.++++++++++++|.+.. +.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~-~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYE-SEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCceEEEE
Confidence 4789999999999999999999987653322 47999999999999999999999999999999998864 45899999
Q ss_pred CCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCC-----------CCCeEeeccccc
Q 003452 225 NGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSS-----------QNPFLFSGTKVA 293 (819)
Q Consensus 225 dG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~-----------~~~~l~sGt~v~ 293 (819)
||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|.+. .++++|+||.|.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998889999999999999999752 238999999999
Q ss_pred cceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHH--------------------
Q 003452 294 DGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVL-------------------- 353 (819)
Q Consensus 294 ~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~-------------------- 353 (819)
+|+++++|++||.+|++|||.+.+.+.+.++||+|+++++++.+++++.+++++++++++
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYY 239 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHH
Confidence 999999999999999999999999888888999999999999988877666555443321
Q ss_pred ------h------------------------------------------------------------------cc-----
Q 003452 354 ------L------------------------------------------------------------------KK----- 356 (819)
Q Consensus 354 ------~------------------------------------------------------------------~~----- 356 (819)
+ ..
T Consensus 240 ~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~ 319 (917)
T TIGR01116 240 FKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSS 319 (917)
T ss_pred HHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccc
Confidence 0 00
Q ss_pred ------------C---------------------------------------C---------------------------
Q 003452 357 ------------T---------------------------------------D--------------------------- 358 (819)
Q Consensus 357 ------------~---------------------------------------~--------------------------- 358 (819)
+ +
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~ 399 (917)
T TIGR01116 320 LNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATK 399 (917)
T ss_pred cceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchh
Confidence 0 0
Q ss_pred -------------------------------------------CceEEEecchHHHHHHhhhhcccccCCcccCCHHHHH
Q 003452 359 -------------------------------------------NTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKE 395 (819)
Q Consensus 359 -------------------------------------------~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~ 395 (819)
+++.+++|||||.+++.|+++.+++|...|++++.++
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 400 NGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred cccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 0024678999999999999988777889999999999
Q ss_pred HHHHHHHHhhh-CCceeeeeecccCCcccccc---hhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEE
Q 003452 396 RFQQIIQGMAS-SSLRCIAFAHKQVPEEEHRN---EKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMI 471 (819)
Q Consensus 396 ~~~~~i~~~a~-~glr~l~~a~~~~~~~~~~~---~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~ml 471 (819)
++.+.+++|++ +|+||+++|||.++.+.... .....+..|+|++|+|+++++||+||+++++|+.|+++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 99999999999 99999999999986532110 011224568999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcC
Q 003452 472 TGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRD 551 (819)
Q Consensus 472 TGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GD 551 (819)
|||+..||.++|+++|+..++.+. ....++|+++.++.+++..+..++..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v-~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDV-TFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccc-cceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 999999999999999998643211 2357899999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 003452 552 GTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYA 631 (819)
Q Consensus 552 G~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~ 631 (819)
|.||+|||++|||||||| +|++++|++||+++.||||++|++++++||++|.|++++++|.++.|+..+++.+++.++.
T Consensus 639 G~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~ 717 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALG 717 (917)
T ss_pred CcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHc
Confidence 999999999999999999 9999999999999999999999999999999999999999999999999999999988888
Q ss_pred CCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhc---ccc
Q 003452 632 GEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGE---SIF 708 (819)
Q Consensus 632 ~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~---~~~ 708 (819)
.+.|++++|++|+|+++|.+|+++|+.++|++++|++||+.++++++++.+|++++.+++++.++.+..+++.. .+.
T Consensus 718 ~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 797 (917)
T TIGR01116 718 IPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFT 797 (917)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 88999999999999999999999999999999999999999999999999999999999999977443332111 110
Q ss_pred C--------C------------cchhhhHHHHHHHHHHHHHHHHhhhccccccccc-cccchHHHHHHHHHHHHHHHHH-
Q 003452 709 G--------V------------NKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFE-GIHKNRLFLGIIGTTIVLQVVM- 766 (819)
Q Consensus 709 ~--------~------------~~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~-~~~~n~~~~~~i~~~~~~~~~~- 766 (819)
+ . ....++|++|++|+++|+||.+|||+ ++.++|+ ++++|+++++++++++++|+++
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~-~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~ 876 (917)
T TIGR01116 798 GCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALS-EDQSLLRMPPWVNKWLIGAICLSMALHFLIL 876 (917)
T ss_pred cccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcC-CcccccccCCccCHHHHHHHHHHHHHHHHHH
Confidence 0 0 12457899999999999999999999 4567776 7899999999999999999887
Q ss_pred -HHHHhHccccccCChhhHHHHHHHHHHHHHHHHHHhhcc
Q 003452 767 -VEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIP 805 (819)
Q Consensus 767 -v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~ 805 (819)
+++++.+|++.|+++.+|++|++++++.+++.++.|++.
T Consensus 877 ~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 877 YVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred HhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 778999999999999999999999999999999999764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-97 Score=890.72 Aligned_cols=597 Identities=22% Similarity=0.341 Sum_probs=507.8
Q ss_pred CCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHH
Q 003452 115 GIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVI 194 (819)
Q Consensus 115 Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~ 194 (819)
|||++| +++|+++||+|.++++ .+++|+.++++|++|+.++|++++++++++| .|+|++.|++++++..
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~~-~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPEK-KVSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCCC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 898887 9999999999999984 5667899999999999999999999999998 6999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCc
Q 003452 195 AVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESD 274 (819)
Q Consensus 195 ~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~ 274 (819)
.++.+++++++++.++|.++. +.+++|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~~-~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQSL-APKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 999999999999999998764 4589999999999999999999999999999999999999999977999999999999
Q ss_pred eeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh
Q 003452 275 HVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL 354 (819)
Q Consensus 275 pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~ 354 (819)
||.|. .++.+|+||.|.+|+++++|++||++|++|+|.+++++.+.+++|+|+.+++++.++.++.+++++++++++.
T Consensus 149 PV~K~--~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~ 226 (755)
T TIGR01647 149 PVTKK--TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLF 226 (755)
T ss_pred ceEec--cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 4799999999999999999999999999999999999888889999999999999999888777766665422
Q ss_pred ----------------------------------------------------------------ccC-------------
Q 003452 355 ----------------------------------------------------------------KKT------------- 357 (819)
Q Consensus 355 ----------------------------------------------------------------~~~------------- 357 (819)
.|+
T Consensus 227 ~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~ 306 (755)
T TIGR01647 227 FGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDE 306 (755)
T ss_pred HHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEE
Confidence 001
Q ss_pred ----------------------------------------------------------------------CCceEEEecc
Q 003452 358 ----------------------------------------------------------------------DNTSHVHWKG 367 (819)
Q Consensus 358 ----------------------------------------------------------------------~~~~~~~~KG 367 (819)
+|+...++||
T Consensus 307 ~~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kG 386 (755)
T TIGR01647 307 ILPFFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKG 386 (755)
T ss_pred EEecCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeC
Confidence 1333456788
Q ss_pred hHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEee
Q 003452 368 AAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIK 447 (819)
Q Consensus 368 a~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~ 447 (819)
+||.+++.|+.. ++.++++.+.+++++.+|+|++++||++ .|++++|+|+++++
T Consensus 387 a~e~il~~c~~~-----------~~~~~~~~~~~~~~~~~G~rvl~vA~~~---------------~e~~l~~~Gli~l~ 440 (755)
T TIGR01647 387 APQVILDLCDNK-----------KEIEEKVEEKVDELASRGYRALGVARTD---------------EEGRWHFLGLLPLF 440 (755)
T ss_pred ChHHHHHhcCCc-----------HHHHHHHHHHHHHHHhCCCEEEEEEEEc---------------CCCCcEEEEEeecc
Confidence 888888888641 3446677888899999999999999972 14689999999999
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
||+|||++++|++||++||+|+|+||||+.||+++|+++||.... .....+.+|.+.+.++++++.+.++++.||||+
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNI--YTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC--cCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 999999999999999999999999999999999999999997531 123345667777889999999999999999999
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQ 607 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~ 607 (819)
+|+||.++|+.||++|++|+|+|||+||+|||++|||||||| +|+|+||++||+||+||||++|++++++||++|+||+
T Consensus 519 ~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~ 597 (755)
T TIGR01647 519 FPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMK 597 (755)
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHH
Q 003452 608 KLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLV 687 (819)
Q Consensus 608 k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~ 687 (819)
||++|.++.|+..+++.+++.++.+ .||+|+|+||+|+++|. +++++++|++++. ++|.. ..++ .++..++
T Consensus 598 k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p~~---~~~~-~~~~~~~ 668 (755)
T TIGR01647 598 SYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG-TIMTIAYDNVKPS---KLPQR---WNLR-EVFTMST 668 (755)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH-hHhhccCCCCCCC---CCCCc---cchH-HHHHHHH
Confidence 9999999999998887777766544 46999999999999996 5999999998742 33433 3344 6666666
Q ss_pred HHHHHHHHHHHHHHHhhcc------ccC--CcchhhhHHHHHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHH
Q 003452 688 AQALYQRAVLLTLQFRGES------IFG--VNKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTT 759 (819)
Q Consensus 688 ~~~~~~~~v~~~l~~~~~~------~~~--~~~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~ 759 (819)
..+.+..+..+.++++... .++ .+....+|++|..+++.|.++.+++|+ +..+|+. ..|++++...++.
T Consensus 669 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~--~~~~~~~-~p~~~l~~~~~~~ 745 (755)
T TIGR01647 669 VLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFVTRT--HGFFWSE-RPGKLLFIAFVIA 745 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHheecc--CCCCccc-CCcHHHHHHHHHH
Confidence 7777666654444332221 111 123467899999999999999999997 3334443 3566666655555
Q ss_pred HHHHHHH
Q 003452 760 IVLQVVM 766 (819)
Q Consensus 760 ~~~~~~~ 766 (819)
+++.+++
T Consensus 746 ~~~~~~~ 752 (755)
T TIGR01647 746 QIIATFI 752 (755)
T ss_pred HHHHHHH
Confidence 5544443
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-99 Score=845.95 Aligned_cols=709 Identities=26% Similarity=0.388 Sum_probs=602.7
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcc-----c
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKE-----H 174 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~-----~ 174 (819)
.+++|++++++|..+||+..+ +.+++.+-|+|.+++|+..+-|..+.+++++.+-++++++|+++++..... +
T Consensus 43 ~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~ 120 (1019)
T KOG0203|consen 43 SVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDD 120 (1019)
T ss_pred CHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCC
Confidence 799999999999999999988 999999999999999999999999999999999999999999987654211 1
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccce
Q 003452 175 GLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANG 254 (819)
Q Consensus 175 g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg 254 (819)
...+..|-|..+...+++...++.+++.+...-.+....+. +..++|+|||+...+..+||||||+|.++-||+||||.
T Consensus 121 ~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~-P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADi 199 (1019)
T KOG0203|consen 121 PSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLV-PQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADI 199 (1019)
T ss_pred CCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccc-hhhheeeecceeEEechhhcccccceeeccCCccccee
Confidence 11233455544443333334444444444444455555553 45899999999999999999999999999999999999
Q ss_pred EEEeccceeEecccccCCCceeeecCC--------CCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCCh
Q 003452 255 LFLDGHSLQVDESSMTGESDHVEVNSS--------QNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTP 326 (819)
Q Consensus 255 ~ll~g~~l~VDES~LTGES~pv~k~~~--------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 326 (819)
+++++..+++|+|+|||||+|.+.++. ..|+-|.+|.+.+|.++++|.+||.+|.+|+|..+....+..+||
T Consensus 200 Riis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~ 279 (1019)
T KOG0203|consen 200 RIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTP 279 (1019)
T ss_pred EEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCc
Confidence 999999999999999999999998753 357889999999999999999999999999999998887899999
Q ss_pred hHHHHHHHHhhHhHHHHHHHHHHHHHHh----------------------------------------------------
Q 003452 327 LQARLNKLTSSTGKIGLAVAFLVLAVLL---------------------------------------------------- 354 (819)
Q Consensus 327 lq~~l~~~a~~~~~~~l~~a~l~~~v~~---------------------------------------------------- 354 (819)
++..++++..++..+++.+++..|++.+
T Consensus 280 ~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLea 359 (1019)
T KOG0203|consen 280 IAKEIEHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEA 359 (1019)
T ss_pred chhhhhchHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeh
Confidence 9999999999998888888877775433
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 360 vetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~ 439 (1019)
T KOG0203|consen 360 VETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVL 439 (1019)
T ss_pred eeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCcee
Confidence
Q ss_pred ----------------------------------------------------cc-CCCceEEEecchHHHHHHhhhhccc
Q 003452 355 ----------------------------------------------------KK-TDNTSHVHWKGAAEMILAMCSSYYD 381 (819)
Q Consensus 355 ----------------------------------------------------~~-~~~~~~~~~KGa~e~il~~c~~~~~ 381 (819)
.+ .+.++.+..|||||.++++|+.+.-
T Consensus 440 kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i 519 (1019)
T KOG0203|consen 440 KRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILI 519 (1019)
T ss_pred eeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceee
Confidence 11 1224567899999999999998764
Q ss_pred ccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccch----hhhhhhcccCcEEEEEEEeeCCCCccHHHH
Q 003452 382 ASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNE----KDQKKLIEDNLTLLGLVGIKDPCRPGVKKA 457 (819)
Q Consensus 382 ~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~----~~~~~~~e~~l~~lG~v~i~D~lr~~v~~a 457 (819)
+|+..|+++..++.+.+...++...|-|+++++++.+++++++.. .+..+.+.+++.|+|++++-||+|..+++|
T Consensus 520 -~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~A 598 (1019)
T KOG0203|consen 520 -NGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDA 598 (1019)
T ss_pred -cCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchh
Confidence 899999999999999999999999999999999999987654421 122345668999999999999999999999
Q ss_pred HHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC-------------------CCccceecccccccCCHHHHHHHh
Q 003452 458 VEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD-------------------TSTGAVLEGEEFRNYTHEERMEKV 518 (819)
Q Consensus 458 I~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~-------------------~~~~~vi~g~~~~~~~~~~~~~~~ 518 (819)
+..||.|||+|+|+|||++.||++||++.||..+..+ .....|++|.++.+++.+++++++
T Consensus 599 v~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il 678 (1019)
T KOG0203|consen 599 VGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELL 678 (1019)
T ss_pred hhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHH
Confidence 9999999999999999999999999999998765332 135678999999999999999999
Q ss_pred hhhc--eeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 519 DKIC--VMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 519 ~~~~--v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
.+.. ||||.||+||+.+|+..|++|.+|++||||+||+||||+||||||||++|+|++|+|||+||+||||++|+..+
T Consensus 679 ~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGV 758 (1019)
T KOG0203|consen 679 QNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGV 758 (1019)
T ss_pred HhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeec
Confidence 8765 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCC-CCC
Q 003452 597 RWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVG-RTE 675 (819)
Q Consensus 597 ~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~-r~~ 675 (819)
++||-+|+|.+|.+.|.++.|+..+...+++.+++.|.|+.++++|.+++.+|..||++||+|+|+.++|+|+|+. +++
T Consensus 759 EEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D 838 (1019)
T KOG0203|consen 759 EEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDD 838 (1019)
T ss_pred ccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 667
Q ss_pred CcchHHHHHHH-HHHHHHHHHHHHHHHHhhc---cc-----cCC------------------c---------chhhhHHH
Q 003452 676 PLITNIMWRNL-VAQALYQRAVLLTLQFRGE---SI-----FGV------------------N---------KKVKETLI 719 (819)
Q Consensus 676 ~li~~~~~~~i-~~~~~~~~~v~~~l~~~~~---~~-----~~~------------------~---------~~~~~T~~ 719 (819)
.|++......- ...+++|.+..|+-+|... .+ .++ . ....+|..
T Consensus 839 ~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taF 918 (1019)
T KOG0203|consen 839 KLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAF 918 (1019)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhhe
Confidence 88888765433 3345666655544333221 11 111 0 34567889
Q ss_pred HHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHH--HHHHHHHhHccccccCChhhHHHHHHHHHHHHHH
Q 003452 720 FNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQ--VVMVEFLKNFADTERLNWGQWSACIGFAAASWPI 797 (819)
Q Consensus 720 f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~--~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~ 797 (819)
|.++|++|+++.+.|.+ ++.++|+.-++||.++.+++..+++. +.+++.....+++.|+.|.+|+..+.++++.|++
T Consensus 919 fvsIvV~Q~adLii~KT-RRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~ilIfvy 997 (1019)
T KOG0203|consen 919 FISIVVVQWADLIICKT-RRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGILIFVY 997 (1019)
T ss_pred eeeehHHhHhhHHhhhc-chhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEecccceeeeeeH
Confidence 99999999999998876 67888986699999988887766554 4445677888999999999999999999999999
Q ss_pred HHHHhhccC--CCCcccc
Q 003452 798 GWLVKCIPV--PAKPFSS 813 (819)
Q Consensus 798 ~~~~k~i~~--~~~~~~~ 813 (819)
+++.|++.+ |..|+.+
T Consensus 998 dE~Rk~~IR~~P~gw~e~ 1015 (1019)
T KOG0203|consen 998 DEVRKLFIRRYPGGWLEK 1015 (1019)
T ss_pred HHHHhHhhhhCCCchhhh
Confidence 999998864 5555543
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-95 Score=899.28 Aligned_cols=636 Identities=22% Similarity=0.312 Sum_probs=526.0
Q ss_pred CCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHH
Q 003452 113 DAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFL 192 (819)
Q Consensus 113 ~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l 192 (819)
..||+++| +++|++.||+|.++.| .++||+++++++.+|+++++++|+++|+..+ .|++++.|++++++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~-~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~~--------~~~~~~~i~~i~~~ 205 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIP-VPSFLELLKEEVLHPFYVFQVFSVILWLLDE--------YYYYSLCIVFMSST 205 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhhh--------hHHHHHHHHHHHHH
Confidence 46999877 9999999999999986 5899999999999999999999988887543 68999999888888
Q ss_pred HHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEe--cCCeeccceEEEeccceeEeccccc
Q 003452 193 VIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLK--IGDQVPANGLFLDGHSLQVDESSMT 270 (819)
Q Consensus 193 ~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~--~Gd~VPaDg~ll~g~~l~VDES~LT 270 (819)
...++.++++++.++++++.. .+..++|+|||++++|+++||||||+|.|+ +||+|||||++++|+ +.||||+||
T Consensus 206 ~~~~~~~~~~k~~~~L~~~~~--~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LT 282 (1054)
T TIGR01657 206 SISLSVYQIRKQMQRLRDMVH--KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhhc--CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEeccccc
Confidence 777777777666666655543 245799999999999999999999999999 999999999999997 599999999
Q ss_pred CCCceeeecCC----------------CCCeEeecccccc-------ceEEEEEEEeCCcChHHHHHHHhhhcCCCCChh
Q 003452 271 GESDHVEVNSS----------------QNPFLFSGTKVAD-------GYARMLATSVGMNTTWGQMMSQISRDNSEQTPL 327 (819)
Q Consensus 271 GES~pv~k~~~----------------~~~~l~sGt~v~~-------G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tpl 327 (819)
|||.|+.|.+. +++++|+||.|.+ |.++++|++||.+|..|++++++......++++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999752 2357999999984 889999999999999999999998888889999
Q ss_pred HHHHHHHHhhHhHHHHHHHHHHHHHHh-----------------------------------------------------
Q 003452 328 QARLNKLTSSTGKIGLAVAFLVLAVLL----------------------------------------------------- 354 (819)
Q Consensus 328 q~~l~~~a~~~~~~~l~~a~l~~~v~~----------------------------------------------------- 354 (819)
++.+.++...+..++++.++.+++...
T Consensus 363 ~~~~~~~~~~l~~~a~i~~i~~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~i 442 (1054)
T TIGR01657 363 YKDSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRI 442 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccc
Confidence 999998887776655444333322110
Q ss_pred ----------cc--------------------------------------------------------------------
Q 003452 355 ----------KK-------------------------------------------------------------------- 356 (819)
Q Consensus 355 ----------~~-------------------------------------------------------------------- 356 (819)
.|
T Consensus 443 e~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~ 522 (1054)
T TIGR01657 443 NFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEA 522 (1054)
T ss_pred eecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHh
Confidence 00
Q ss_pred --------CC--------------------------------------------CceEEEecchHHHHHHhhhhcccccC
Q 003452 357 --------TD--------------------------------------------NTSHVHWKGAAEMILAMCSSYYDASG 384 (819)
Q Consensus 357 --------~~--------------------------------------------~~~~~~~KGa~e~il~~c~~~~~~~g 384 (819)
.+ +++.+++|||||.++++|+..
T Consensus 523 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~----- 597 (1054)
T TIGR01657 523 TGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE----- 597 (1054)
T ss_pred CCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc-----
Confidence 00 112378899999999999741
Q ss_pred CcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccc-hhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHh
Q 003452 385 NIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRN-EKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQY 463 (819)
Q Consensus 385 ~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~-~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~ 463 (819)
..++.+.+.+++|+.+|+||||+|||++++..... ...+++..|+|++|+|+++++||+||+++++|++|++
T Consensus 598 -------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~ 670 (1054)
T TIGR01657 598 -------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKR 670 (1054)
T ss_pred -------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHH
Confidence 12466788899999999999999999986422110 1123456789999999999999999999999999999
Q ss_pred cCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC------------------------------------------------C
Q 003452 464 AGVNIKMITGDNVFTAKAIATECGILKPGQD------------------------------------------------T 495 (819)
Q Consensus 464 aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~------------------------------------------------~ 495 (819)
+||+++|+||||+.||.+||++|||..++.. .
T Consensus 671 agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (1054)
T TIGR01657 671 ASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLAS 750 (1054)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhccc
Confidence 9999999999999999999999999754310 0
Q ss_pred Cccceeccccccc---CCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCC
Q 003452 496 STGAVLEGEEFRN---YTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQG 572 (819)
Q Consensus 496 ~~~~vi~g~~~~~---~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~g 572 (819)
....+++|++++. +.++++.+.++++.||||++|+||.++|+.||+.|++|+|||||+||+||||+||||||||.
T Consensus 751 ~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~-- 828 (1054)
T TIGR01657 751 RYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSE-- 828 (1054)
T ss_pred ceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeecc--
Confidence 1136889998865 45678899999999999999999999999999999999999999999999999999999993
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHh
Q 003452 573 TEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLG 652 (819)
Q Consensus 573 t~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~ 652 (819)
+|+ ..+||+++.+|||++|++++++||+++.|+++.++|.+.++++..+..++ ++....|++++|+||+|+++++++
T Consensus 829 ~da-s~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~ 905 (1054)
T TIGR01657 829 AEA-SVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLLLIFPV 905 (1054)
T ss_pred ccc-eeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccCcCccHHHHHHHHHHHHHH
Confidence 354 48999999999999999999999999999999999999999887555443 334459999999999999999999
Q ss_pred HhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhc--ccc----C--C----cchhhhHHHH
Q 003452 653 ALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGE--SIF----G--V----NKKVKETLIF 720 (819)
Q Consensus 653 alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~--~~~----~--~----~~~~~~T~~f 720 (819)
+++|+.++|.+++|++|| .++++++.++.++++|+++++++.++.++... .++ . . .+...+|++|
T Consensus 906 ~l~l~~~~p~~~l~~~~P---~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f 982 (1054)
T TIGR01657 906 ALLMSRNKPLKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF 982 (1054)
T ss_pred HHHHHcCCchhhcCCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH
Confidence 999999999999999999 46899999999999999999988776654432 232 1 1 1345679999
Q ss_pred HHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHH----HHHHHhHccccccCChhhHH
Q 003452 721 NTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVV----MVEFLKNFADTERLNWGQWS 785 (819)
Q Consensus 721 ~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~----~v~~~~~~f~~~~l~~~~w~ 785 (819)
.++.+|.++.+++++. +.++.+++++|+++++.++++++++++ .+++++.+|++.|++. .|-
T Consensus 983 -~~~~~~~~~~~~~~~~-g~pf~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~ 1048 (1054)
T TIGR01657 983 -FVSSFQYLITAIVNSK-GPPFREPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ-EFR 1048 (1054)
T ss_pred -HHHHHHHHHheEEEcC-CcchhhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH-HHH
Confidence 5666666666777764 677778999999998888887666653 2478899999999985 443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-76 Score=731.42 Aligned_cols=659 Identities=21% Similarity=0.277 Sum_probs=470.4
Q ss_pred cCCCccCCCCCchH---HHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhhhHHH
Q 003452 130 FSSNTYKKPPSKSL---FYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNR 206 (819)
Q Consensus 130 ~G~N~~~~~~~~~~---~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~ 206 (819)
|.+|.+...+...+ ++.+|+||+.+.++++++.++++++.++.+.+ ++..+. .++++..++++.++.++.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~----~~t~~~---pL~~v~~~~~~~~~~ed~ 73 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTY----RGTSIV---PLAFVLIVTAIKEAIEDI 73 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC----ccHhHH---hHHHHHHHHHHHHHHHHH
Confidence 56788877655444 68999999999999999999999887665433 222222 222233334444444444
Q ss_pred HHHHHhcccCCcceEEEeC-CEEEEEecCccccCCEEEEecCCeeccceEEEeccc----eeEecccccCCCceeeecCC
Q 003452 207 QFDKFSKVSNNIQIDVIRN-GRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHS----LQVDESSMTGESDHVEVNSS 281 (819)
Q Consensus 207 ~~~~l~~~~~~~~~~V~Rd-G~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~----l~VDES~LTGES~pv~k~~~ 281 (819)
+.++.++..++..++|+|+ |++++++++||+|||+|.|++||+|||||++++++. +.||||+|||||.|+.|.+.
T Consensus 74 ~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 74 RRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 4443333334568999997 899999999999999999999999999999998543 69999999999999998642
Q ss_pred ----------------------------------------------CCCeEeecccccc-ceEEEEEEEeCCcChHHHHH
Q 003452 282 ----------------------------------------------QNPFLFSGTKVAD-GYARMLATSVGMNTTWGQMM 314 (819)
Q Consensus 282 ----------------------------------------------~~~~l~sGt~v~~-G~~~~~V~~vG~~T~~g~i~ 314 (819)
.++++++||.+.+ |.+.++|++||.+|.+++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n- 232 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRN- 232 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhc-
Confidence 1257889999998 9999999999999977653
Q ss_pred HHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHH-------------------------------------Hh---
Q 003452 315 SQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAV-------------------------------------LL--- 354 (819)
Q Consensus 315 ~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v-------------------------------------~~--- 354 (819)
......++|++|++++++..++..+.++++++++++ +.
T Consensus 233 --~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~ 310 (1057)
T TIGR01652 233 --ATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSL 310 (1057)
T ss_pred --CCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhh
Confidence 445567789999999999987766555444333221 00
Q ss_pred -----------------------------------------------------ccCCCceE--------E------Eecc
Q 003452 355 -----------------------------------------------------KKTDNTSH--------V------HWKG 367 (819)
Q Consensus 355 -----------------------------------------------------~~~~~~~~--------~------~~KG 367 (819)
.|++|+.. + |.++
T Consensus 311 IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~ 390 (1057)
T TIGR01652 311 IPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDG 390 (1057)
T ss_pred cceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCC
Confidence 23333210 0 0000
Q ss_pred --------------------------------h-----------------HHH--HHHhhhhcc----cc----------
Q 003452 368 --------------------------------A-----------------AEM--ILAMCSSYY----DA---------- 382 (819)
Q Consensus 368 --------------------------------a-----------------~e~--il~~c~~~~----~~---------- 382 (819)
. .+. .+..|.... ++
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~ 470 (1057)
T TIGR01652 391 FTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAA 470 (1057)
T ss_pred cchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEcc
Confidence 0 000 122232110 00
Q ss_pred --------------------------------cCCc--------ccC---------------------------------
Q 003452 383 --------------------------------SGNI--------KYL--------------------------------- 389 (819)
Q Consensus 383 --------------------------------~g~~--------~~l--------------------------------- 389 (819)
.|.. .|+
T Consensus 471 sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~ 550 (1057)
T TIGR01652 471 SPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRL 550 (1057)
T ss_pred CCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHh
Confidence 0000 000
Q ss_pred ---CHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhh------------------hhhhcccCcEEEEEEEeeC
Q 003452 390 ---DDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKD------------------QKKLIEDNLTLLGLVGIKD 448 (819)
Q Consensus 390 ---~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~------------------~~~~~e~~l~~lG~v~i~D 448 (819)
+++.++.+.+.+++++.+|+||+++|||.+++++...+.. ..+.+|+|++|+|+++++|
T Consensus 551 ~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD 630 (1057)
T TIGR01652 551 SSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIED 630 (1057)
T ss_pred hccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhh
Confidence 1223556778899999999999999999997654321100 0134789999999999999
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC----------------------------------
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD---------------------------------- 494 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~---------------------------------- 494 (819)
|+|||++++|+.|++|||+|||+|||+.+||.+||++|||..++..
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 710 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLG 710 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhc
Confidence 9999999999999999999999999999999999999999875431
Q ss_pred --CCccceecccccccCCHHH----HHHHhhhhc--eeccCCHhhHHHHHHHHHhC-CCEEEEEcCCCCCHHHhhhCCcc
Q 003452 495 --TSTGAVLEGEEFRNYTHEE----RMEKVDKIC--VMARSSPFDKLLMVQCLKQK-GHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 495 --~~~~~vi~g~~~~~~~~~~----~~~~~~~~~--v~ar~sP~~K~~iV~~L~~~-g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
....++++|+++..+.+++ +.+.+.++. |+||++|+||.++|+.+|+. |++|+|+|||+||+|||++||||
T Consensus 711 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVG 790 (1057)
T TIGR01652 711 DSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVG 790 (1057)
T ss_pred cCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCee
Confidence 0123588999887655433 445556565 99999999999999999998 99999999999999999999999
Q ss_pred eeeCCCChHHHHhhcCEEEeCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCchhHHHH
Q 003452 566 LSMGIQGTEVAKESSDIVILDDNFASVARVL-RWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAG---EIPLTAVQL 641 (819)
Q Consensus 566 Iamg~~gt~~ak~aaDivl~dd~f~~i~~~i-~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~---~~pl~~~ql 641 (819)
|++.+....+|+++||+++. +|+.+.+++ .+||+.|.|+++++.|.++.|++.+++.+++.++.+ .+|+.++++
T Consensus 791 Igi~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l 868 (1057)
T TIGR01652 791 VGISGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYM 868 (1057)
T ss_pred eEecChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 97753333379999999998 599999998 559999999999999999999999999999887654 467899999
Q ss_pred HHHHhhhhhHhHhhhcc--cCCcccccCCCCC----CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccc---c--C-
Q 003452 642 LWVNLIMDTLGALALAT--EKPTKELMDKPPV----GRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESI---F--G- 709 (819)
Q Consensus 642 l~vnli~d~l~alal~~--e~p~~~lm~~~P~----~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~~~---~--~- 709 (819)
+|+|++++.+|+++++. +++++++|.++|+ +++.++++...+..|++.+++|.++++++.+..... . |
T Consensus 869 ~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~ 948 (1057)
T TIGR01652 869 VLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGS 948 (1057)
T ss_pred HHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCc
Confidence 99999999999999975 4677889999997 567889999888889999999999887665433211 1 1
Q ss_pred -CcchhhhHHHHHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHHHHHHHhHcc---------ccccC
Q 003452 710 -VNKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFA---------DTERL 779 (819)
Q Consensus 710 -~~~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~v~~~~~~f---------~~~~l 779 (819)
.+.....+++|.+.++...+..+..- + ..+|+.+..+.+++++.++.....+.++ ...--
T Consensus 949 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~wt~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1018 (1057)
T TIGR01652 949 LDDFSSVGVIVFTALVVIVNLKIALEI-----N-----RWNWISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMG 1018 (1057)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHH-----h-----HhHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHc
Confidence 11234456666666555544432110 0 1122222233333333222222122111 01112
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhhccCCCCc
Q 003452 780 NWGQWSACIGFAAASWPIGWLVKCIPVPAKP 810 (819)
Q Consensus 780 ~~~~w~~~~~~~~~~~~~~~~~k~i~~~~~~ 810 (819)
++..|+.+++..++++...++.|++..-..|
T Consensus 1019 s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P 1049 (1057)
T TIGR01652 1019 TFGFWLVLLVIVLISLLPRFTYKAIQRLFRP 1049 (1057)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5778988888888888888888877654444
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-76 Score=669.21 Aligned_cols=630 Identities=23% Similarity=0.307 Sum_probs=498.1
Q ss_pred cCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHH
Q 003452 112 FDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVF 191 (819)
Q Consensus 112 ~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~ 191 (819)
...||+..+ +.+|+..||+|.+..+ .++.++++.++.-+|+++++.++.++|+.-+ ++|++.+|++.-+
T Consensus 157 ~~~gL~~~~--~~~r~~iyG~N~i~l~-ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~--------Y~~YA~cI~iisv 225 (1140)
T KOG0208|consen 157 VSNGLERQE--IIDRRIIYGRNVISLP-IKSISQILVKEVLNPFYLFQAFSVALWLADS--------YYYYAFCIVIISV 225 (1140)
T ss_pred ccCCccHHH--HHhHHhhcCCceeeee-cccHHHHHHHhccchHHHHHhHHhhhhhccc--------chhhhhHHHHHHH
Confidence 357998876 9999999999999985 8899999999999999999999999997655 5667777776666
Q ss_pred HHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEec-CCeeccceEEEeccceeEeccccc
Q 003452 192 LVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKI-GDQVPANGLFLDGHSLQVDESSMT 270 (819)
Q Consensus 192 l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~-Gd~VPaDg~ll~g~~l~VDES~LT 270 (819)
..++++.+...++++.++++.+. ...|+|+|||.+++|+++||||||++.+.+ |-..|||+++++|++ .||||+||
T Consensus 226 ~Si~~sv~e~r~qs~rlr~mv~~--~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEsmLT 302 (1140)
T KOG0208|consen 226 YSIVLSVYETRKQSIRLRSMVKF--TCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNESMLT 302 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-Eeeccccc
Confidence 66666666666666666666554 347999999999999999999999999988 899999999999998 89999999
Q ss_pred CCCceeeecCC-----------------CCCeEeecccccc------ceEEEEEEEeCCcChHHHHHHHhhhcCCCCChh
Q 003452 271 GESDHVEVNSS-----------------QNPFLFSGTKVAD------GYARMLATSVGMNTTWGQMMSQISRDNSEQTPL 327 (819)
Q Consensus 271 GES~pv~k~~~-----------------~~~~l~sGt~v~~------G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tpl 327 (819)
|||.||.|.+. ..+++|+||++++ |.+.+.|++||.+|..|++.+.+...+.....+
T Consensus 303 GESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkf 382 (1140)
T KOG0208|consen 303 GESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKF 382 (1140)
T ss_pred CCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHH
Confidence 99999999863 3578999999985 789999999999999999999997653333333
Q ss_pred HHHHHHHHhhHhHHHHHHHHHHHHHHh-----------------------------------------------------
Q 003452 328 QARLNKLTSSTGKIGLAVAFLVLAVLL----------------------------------------------------- 354 (819)
Q Consensus 328 q~~l~~~a~~~~~~~l~~a~l~~~v~~----------------------------------------------------- 354 (819)
-+-.-++. ....++|++.|++..
T Consensus 383 yrds~~fi----~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCis 458 (1140)
T KOG0208|consen 383 YRDSFKFI----LFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCIS 458 (1140)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcC
Confidence 33333332 333333333333221
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 459 P~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL 538 (1140)
T KOG0208|consen 459 PQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSL 538 (1140)
T ss_pred ccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhcee
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 539 ~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSV 618 (1140)
T KOG0208|consen 539 TLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSV 618 (1140)
T ss_pred EEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEE
Confidence
Q ss_pred ---ccCCCceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCccccc-chhhh
Q 003452 355 ---KKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR-NEKDQ 430 (819)
Q Consensus 355 ---~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~-~~~~~ 430 (819)
...+....+|+|||||.|.+.|.. +..++.+++.++.|+.+|+|++|+|+|+++..... ....+
T Consensus 619 Iv~~~~e~~~~~ftKGaPE~I~~ic~p------------~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~ 686 (1140)
T KOG0208|consen 619 IVSTGGEDKMMVFTKGAPESIAEICKP------------ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLS 686 (1140)
T ss_pred EEecCCCCceEeeccCCHHHHHHhcCc------------ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhcc
Confidence 011234668999999999999975 34466789999999999999999999999765211 11234
Q ss_pred hhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC----------------
Q 003452 431 KKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD---------------- 494 (819)
Q Consensus 431 ~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~---------------- 494 (819)
++.+|+|++|+|++.+++++|++++.+|++|++|.|+++|+||||..||..+||+||+..+...
T Consensus 687 Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~ 766 (1140)
T KOG0208|consen 687 RDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQ 766 (1140)
T ss_pred HhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCce
Confidence 7789999999999999999999999999999999999999999999999999999999876321
Q ss_pred ----------------------------------CCccceecccccccC---CHHHHHHHhhhhceeccCCHhhHHHHHH
Q 003452 495 ----------------------------------TSTGAVLEGEEFRNY---THEERMEKVDKICVMARSSPFDKLLMVQ 537 (819)
Q Consensus 495 ----------------------------------~~~~~vi~g~~~~~~---~~~~~~~~~~~~~v~ar~sP~~K~~iV~ 537 (819)
.+..++++|+.|+-+ ..+.+..++.+..||||++|.||.++|+
T Consensus 767 i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie 846 (1140)
T KOG0208|consen 767 IVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIE 846 (1140)
T ss_pred eEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHH
Confidence 023467788887644 3567788888999999999999999999
Q ss_pred HHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 538 CLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTAN 617 (819)
Q Consensus 538 ~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~n 617 (819)
.||+.|+.|+|+|||+|||.|||+||+|||++.++ |.-||.+...-.+.++++++|++||+.+..-...++|...|.
T Consensus 847 ~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs 923 (1140)
T KOG0208|consen 847 ALQKLGYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYS 923 (1140)
T ss_pred HHHhcCcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999998543 555699998888999999999999999999999999988887
Q ss_pred HHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 003452 618 VAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVL 697 (819)
Q Consensus 618 v~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~ 697 (819)
++..+..+ .++....-++..|.++++++..++.|++++..+|..++-..|| +..|+++..+..+++|.++...+.
T Consensus 924 ~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L~s~~~~~~l~~q~vli~l~q 998 (1140)
T KOG0208|consen 924 AIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNLLSKKILVPLLLQIVLICLVQ 998 (1140)
T ss_pred HHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---CccccccchhhhhHHHHHHHHHHH
Confidence 76544332 2455678899999999999999999999999999999988888 556999999999999988877777
Q ss_pred HHHHHhhc--cccCC--------cchhhhHHHHHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHHHH
Q 003452 698 LTLQFRGE--SIFGV--------NKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMV 767 (819)
Q Consensus 698 ~~l~~~~~--~~~~~--------~~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~v 767 (819)
+...+... .|+.. ..+..+|.+|..-.|.-+++.+..-. +.++.+++|+|+.|...+.......+.++
T Consensus 999 ~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v~S~--g~pfr~pl~~n~~f~~~i~~i~~~~i~l~ 1076 (1140)
T KOG0208|consen 999 WILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALVLSK--GSPFRRPLWKNVLFKVFITVIILSTIYLL 1076 (1140)
T ss_pred HhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhheeecc--CCcccCchhcCceeeeehhhHHhhhhhhh
Confidence 76655432 34432 13456788887666666666543222 55666799999988766554444333322
Q ss_pred H----H-HhHccccccCCh
Q 003452 768 E----F-LKNFADTERLNW 781 (819)
Q Consensus 768 ~----~-~~~~f~~~~l~~ 781 (819)
. + ..+.++.++.+-
T Consensus 1077 ~~~~~~~~~~l~~~t~~~~ 1095 (1140)
T KOG0208|consen 1077 FVNYLFIEWKLLQLTYIPT 1095 (1140)
T ss_pred hccccchhhhhhceeccCc
Confidence 1 1 113466666655
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-72 Score=652.69 Aligned_cols=417 Identities=25% Similarity=0.363 Sum_probs=340.6
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHhhccc--Cccc-chhhHHHHHHHHHHHHHHHHhh----hhhHHHHHHHHhcccCCcce
Q 003452 148 VDALKDLTILILLGCAVLSLAFGIKEH--GLKE-GWYEGGSILVAVFLVIAVSAGS----NFTQNRQFDKFSKVSNNIQI 220 (819)
Q Consensus 148 ~~~~~~~~~~il~v~a~~s~~~g~~~~--g~~~-~~~~~~~i~~~v~l~~~v~~~~----~~~~~~~~~~l~~~~~~~~~ 220 (819)
...+++|+.++|+++++++++++...+ +... .+++++.|++.++++..++.+. +++.+++.++|.+..++.++
T Consensus 27 ~~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 27 VYMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 356789999999999999999986532 1111 2366778888887777776666 67777778888887655456
Q ss_pred E-EEeCCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCC-CCCeEeeccccccceEE
Q 003452 221 D-VIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSS-QNPFLFSGTKVADGYAR 298 (819)
Q Consensus 221 ~-V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~-~~~~l~sGt~v~~G~~~ 298 (819)
+ |.|||++++|++++|+|||+|.|++||+|||||++++|++ .||||+|||||.||.|+++ +.+.+|+||.|.+|+++
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~ 185 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLE 185 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecceEE
Confidence 5 7799999999999999999999999999999999999987 9999999999999999853 11569999999999999
Q ss_pred EEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHH---------------H--h-------
Q 003452 299 MLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAV---------------L--L------- 354 (819)
Q Consensus 299 ~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v---------------~--~------- 354 (819)
++|+++|.+|++|||.+++++++.++||+|..+..+...+..+.+++.+..+.+ + +
T Consensus 186 i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~ii~l~~~~~~~~~~~~~~~~~~~~~~val~V~~IP~aL~ 265 (673)
T PRK14010 186 VEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLNFNLSIAMLIALAVCLIPTTIG 265 (673)
T ss_pred EEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhhhhhHH
Confidence 999999999999999999999999999999988887655433322221111100 0 0
Q ss_pred -------------------------------------ccCCCce------------------------------------
Q 003452 355 -------------------------------------KKTDNTS------------------------------------ 361 (819)
Q Consensus 355 -------------------------------------~~~~~~~------------------------------------ 361 (819)
.|++|+.
T Consensus 266 ~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~~~~~ll~~a~~~~~~s~~P~ 345 (673)
T PRK14010 266 GLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKAAYESSIADDTPE 345 (673)
T ss_pred HHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCccHHHHHHHHHHhcCCCCChH
Confidence 1222210
Q ss_pred --------------------------------------EEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHH
Q 003452 362 --------------------------------------HVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQG 403 (819)
Q Consensus 362 --------------------------------------~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~ 403 (819)
..+.||++|.+++.|+. +|...+ ..+.+.+++
T Consensus 346 ~~AIv~~a~~~~~~~~~~~~~~~pF~~~~k~~gv~~~g~~i~kGa~~~il~~~~~----~g~~~~------~~~~~~~~~ 415 (673)
T PRK14010 346 GRSIVKLAYKQHIDLPQEVGEYIPFTAETRMSGVKFTTREVYKGAPNSMVKRVKE----AGGHIP------VDLDALVKG 415 (673)
T ss_pred HHHHHHHHHHcCCCchhhhcceeccccccceeEEEECCEEEEECCHHHHHHHhhh----cCCCCc------hHHHHHHHH
Confidence 12335555555555542 111111 124455667
Q ss_pred hhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH
Q 003452 404 MASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIA 483 (819)
Q Consensus 404 ~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA 483 (819)
++++|+|+++++ .|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||
T Consensus 416 ~a~~G~~~l~v~--------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA 475 (673)
T PRK14010 416 VSKKGGTPLVVL--------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIA 475 (673)
T ss_pred HHhCCCeEEEEE--------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH
Confidence 888888888753 256899999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCC
Q 003452 484 TECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETD 563 (819)
Q Consensus 484 ~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Ad 563 (819)
+++||.+ ++||++||||.++|+.+|++|++|+|||||+||+|||++||
T Consensus 476 ~elGI~~--------------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~AD 523 (673)
T PRK14010 476 KEAGVDR--------------------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEAN 523 (673)
T ss_pred HHcCCce--------------------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCC
Confidence 9999975 89999999999999999999999999999999999999999
Q ss_pred cceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 564 IGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAA 628 (819)
Q Consensus 564 vGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~ 628 (819)
|||||| +|||+||++||+|++||||++|++++++||++|.|+++++.|+++.|+...+..+.+.
T Consensus 524 VGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~ 587 (673)
T PRK14010 524 VGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAM 587 (673)
T ss_pred EEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHH
Confidence 999999 9999999999999999999999999999999999999999999999998766655543
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-70 Score=638.05 Aligned_cols=407 Identities=25% Similarity=0.341 Sum_probs=338.6
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHhhccc------CcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceE
Q 003452 148 VDALKDLTILILLGCAVLSLAFGIKEH------GLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQID 221 (819)
Q Consensus 148 ~~~~~~~~~~il~v~a~~s~~~g~~~~------g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~ 221 (819)
..+|+||+.++|++++++++++++... .+..+|..++.+++.+++..+++++++++.++++++|.++.+...++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 457889999999999999999986432 12245666677777777777888899999999999999987655799
Q ss_pred EEeCCE-EEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCC-CCeEeeccccccceEEE
Q 003452 222 VIRNGR-RQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQ-NPFLFSGTKVADGYARM 299 (819)
Q Consensus 222 V~RdG~-~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~-~~~l~sGt~v~~G~~~~ 299 (819)
|+|||+ +++|++++|++||+|.+++||+|||||++++|.. .||||++||||.||.|+++. .+.+|+||.|.+|.+++
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999988 8999999999999999999999999999999986 99999999999999998531 23499999999999999
Q ss_pred EEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHH-H------------------h------
Q 003452 300 LATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAV-L------------------L------ 354 (819)
Q Consensus 300 ~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v-~------------------~------ 354 (819)
+|+++|.+|++|||++++++++.++||+|..++.+...+..+.+++++.++.+ + +
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~~g~~~~l~~~iallV~aiP~alg~ 266 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAYSGGALSITVLVALLVCLIPTTIGG 266 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHcccchhhh
Confidence 99999999999999999999999999999999887766544333222111100 0 0
Q ss_pred ------------------------------------ccCCCce-------------------------------------
Q 003452 355 ------------------------------------KKTDNTS------------------------------------- 361 (819)
Q Consensus 355 ------------------------------------~~~~~~~------------------------------------- 361 (819)
.|++|+.
T Consensus 267 l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~a~~~s~~s~hP~~ 346 (679)
T PRK01122 267 LLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGVTEEELADAAQLSSLADETPEG 346 (679)
T ss_pred HHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCCCHHHHHHHHHHhcCCCCCchH
Confidence 2233211
Q ss_pred -----------------------------------------EEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHH
Q 003452 362 -----------------------------------------HVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQI 400 (819)
Q Consensus 362 -----------------------------------------~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~ 400 (819)
..+.||++|.+++.|.. +|.. ..+++.+.
T Consensus 347 ~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~~g~~~~kGa~e~il~~~~~----~g~~------~~~~~~~~ 416 (679)
T PRK01122 347 RSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDLDGREIRKGAVDAIRRYVES----NGGH------FPAELDAA 416 (679)
T ss_pred HHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEECCEEEEECCHHHHHHHHHh----cCCc------ChHHHHHH
Confidence 12344555555544432 1111 12345667
Q ss_pred HHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHH
Q 003452 401 IQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAK 480 (819)
Q Consensus 401 i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~ 480 (819)
+++++++|+|++++|+ |++++|+++++||+|||++++|++||++||+++|+||||+.||.
T Consensus 417 ~~~~a~~G~~~l~va~--------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~ 476 (679)
T PRK01122 417 VDEVARKGGTPLVVAE--------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAA 476 (679)
T ss_pred HHHHHhCCCcEEEEEE--------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 7788999999999883 46899999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhh
Q 003452 481 AIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALK 560 (819)
Q Consensus 481 ~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~ 560 (819)
+||+++||.+ ++||++||||.++|+.+|++|++|+|||||+||+|||+
T Consensus 477 aIA~elGId~--------------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa 524 (679)
T PRK01122 477 AIAAEAGVDD--------------------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALA 524 (679)
T ss_pred HHHHHcCCcE--------------------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHH
Confidence 9999999965 89999999999999999999999999999999999999
Q ss_pred hCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 561 ETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVA 619 (819)
Q Consensus 561 ~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~ 619 (819)
+|||||||| +|||+||++||+|++||||++|++++++||++.-.--..-.|++. |-+
T Consensus 525 ~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~-n~~ 581 (679)
T PRK01122 525 QADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA-NDV 581 (679)
T ss_pred hCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH-HHH
Confidence 999999999 999999999999999999999999999999999766666778876 554
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-68 Score=651.91 Aligned_cols=553 Identities=19% Similarity=0.278 Sum_probs=420.0
Q ss_pred HhcCCCccCCCCCc---hHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhhhH
Q 003452 128 EAFSSNTYKKPPSK---SLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQ 204 (819)
Q Consensus 128 ~~~G~N~~~~~~~~---~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~ 204 (819)
..|..|.+...|-. -+.+.+|+||+.+.++.+++.+++.++..+...++ .+.++.++++..++++.+..+
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~-------~t~~~PL~~vl~v~~ike~~E 157 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGR-------GASILPLAFVLLVTAVKDAYE 157 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCc-------chHHHHHHHHHHHHHHHHHHH
Confidence 35888988765322 23466789999999999999999987766544332 122334444444555555555
Q ss_pred HHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEe-----ccceeEecccccCCCceeeec
Q 003452 205 NRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLD-----GHSLQVDESSMTGESDHVEVN 279 (819)
Q Consensus 205 ~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~-----g~~l~VDES~LTGES~pv~k~ 279 (819)
+.+.++.++..++..++|+|+|.+++++++||+|||+|.|++||+|||||++++ |.+ .||||+|||||.|+.|.
T Consensus 158 d~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~-~Vdts~LdGEt~~k~k~ 236 (1178)
T PLN03190 158 DWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVA-YVQTINLDGESNLKTRY 236 (1178)
T ss_pred HHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceE-EEEccccCCeeeeeEec
Confidence 555555554445568999999999999999999999999999999999999998 555 99999999999999996
Q ss_pred CC-------------------------------------------CCCeEeeccccccc-eEEEEEEEeCCcChHHHHHH
Q 003452 280 SS-------------------------------------------QNPFLFSGTKVADG-YARMLATSVGMNTTWGQMMS 315 (819)
Q Consensus 280 ~~-------------------------------------------~~~~l~sGt~v~~G-~~~~~V~~vG~~T~~g~i~~ 315 (819)
+. .+++++.||.+... .+.++|++||.+|. ++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK---~~~ 313 (1178)
T PLN03190 237 AKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETK---AML 313 (1178)
T ss_pred ccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhh---Hhh
Confidence 32 12345555555543 69999999999996 454
Q ss_pred HhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHH--------------------------------------------
Q 003452 316 QISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLA-------------------------------------------- 351 (819)
Q Consensus 316 ~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~-------------------------------------------- 351 (819)
.-.....+.+++++.+|++..++..+.+++++++.+
T Consensus 314 N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (1178)
T PLN03190 314 NNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFT 393 (1178)
T ss_pred cCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHH
Confidence 444556788999999999987766555444322210
Q ss_pred -----HHh--------------------------------------------------------ccCCCc----------
Q 003452 352 -----VLL--------------------------------------------------------KKTDNT---------- 360 (819)
Q Consensus 352 -----v~~--------------------------------------------------------~~~~~~---------- 360 (819)
+++ .|++|+
T Consensus 394 f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~ 473 (1178)
T PLN03190 394 FLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473 (1178)
T ss_pred HHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEE
Confidence 110 122322
Q ss_pred --------------------------------------------------------------------------------
Q 003452 361 -------------------------------------------------------------------------------- 360 (819)
Q Consensus 361 -------------------------------------------------------------------------------- 360 (819)
T Consensus 474 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~ 553 (1178)
T PLN03190 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDT 553 (1178)
T ss_pred EEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCC
Confidence
Q ss_pred ---------------------------------------------------------------------------eEEEe
Q 003452 361 ---------------------------------------------------------------------------SHVHW 365 (819)
Q Consensus 361 ---------------------------------------------------------------------------~~~~~ 365 (819)
+.+++
T Consensus 554 ~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~ 633 (1178)
T PLN03190 554 SDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFV 633 (1178)
T ss_pred CCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEE
Confidence 01122
Q ss_pred cchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhh----------------
Q 003452 366 KGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKD---------------- 429 (819)
Q Consensus 366 KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~---------------- 429 (819)
|||+|.++++|+.. .++..++.+.+.+++||.+|+|||++|||+++++++..+..
T Consensus 634 KGA~e~il~~~~~~---------~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l 704 (1178)
T PLN03190 634 KGADTSMFSVIDRS---------LNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALL 704 (1178)
T ss_pred ecCcHHHHHhhccc---------ccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHH
Confidence 22222222222111 01223556778899999999999999999997654332110
Q ss_pred --hhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC-------------
Q 003452 430 --QKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD------------- 494 (819)
Q Consensus 430 --~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~------------- 494 (819)
..+.+|+|++++|+++++||+|++++++|++|+++||++||+|||+.+||.+||++|||.+++..
T Consensus 705 ~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~ 784 (1178)
T PLN03190 705 RKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCR 784 (1178)
T ss_pred HhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHH
Confidence 02356899999999999999999999999999999999999999999999999999999866421
Q ss_pred -------------------------------CCccceecccccccCCH----HHHHHHhhhhc--eeccCCHhhHHHHHH
Q 003452 495 -------------------------------TSTGAVLEGEEFRNYTH----EERMEKVDKIC--VMARSSPFDKLLMVQ 537 (819)
Q Consensus 495 -------------------------------~~~~~vi~g~~~~~~~~----~~~~~~~~~~~--v~ar~sP~~K~~iV~ 537 (819)
.+..++++|.++..+.+ +++.+...++. ||||++|+||.++|+
T Consensus 785 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~ 864 (1178)
T PLN03190 785 KSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVA 864 (1178)
T ss_pred HHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHH
Confidence 01237889999887765 45666666666 799999999999999
Q ss_pred HHHhC-CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 003452 538 CLKQK-GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRW-GRCVHTNIQKLIQFQLT 615 (819)
Q Consensus 538 ~L~~~-g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~-gR~~~~ni~k~i~f~l~ 615 (819)
.+|+. +++|+|+|||+||+|||++|||||++.+....+|+.+||+.+. .|..+.+++.+ ||+.|.|+.+.+.|.++
T Consensus 865 ~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~--~Fr~L~rLLlvHGr~~y~R~s~~i~y~fY 942 (1178)
T PLN03190 865 LVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMG--QFRFLVPLLLVHGHWNYQRMGYMILYNFY 942 (1178)
T ss_pred HHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchh--hhHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 99998 5899999999999999999999996543444499999999998 89999999998 99999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCc---hhHHHHHHHHhhhhhHhHhhhc-cc--CCcccccCCCCCC---CCCCcchHHHHHHH
Q 003452 616 ANVAALLINFVAAVYAGEIP---LTAVQLLWVNLIMDTLGALALA-TE--KPTKELMDKPPVG---RTEPLITNIMWRNL 686 (819)
Q Consensus 616 ~nv~~i~~~~~~~~~~~~~p---l~~~qll~vnli~d~l~alal~-~e--~p~~~lm~~~P~~---r~~~li~~~~~~~i 686 (819)
+|++..+++|++.+++++++ +..+-+..+|++++.+|.++++ +| -|.+.+++.|-.+ ++...++...++.|
T Consensus 943 KN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w 1022 (1178)
T PLN03190 943 RNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLT 1022 (1178)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHH
Confidence 99999999999988877554 4678899999999999999985 43 4666677776554 35678898888889
Q ss_pred HHHHHHHHHHHHHHHH
Q 003452 687 VAQALYQRAVLLTLQF 702 (819)
Q Consensus 687 ~~~~~~~~~v~~~l~~ 702 (819)
++.++||.++++++.+
T Consensus 1023 ~~~~i~qs~iiff~~~ 1038 (1178)
T PLN03190 1023 MIDTLWQSAVVFFVPL 1038 (1178)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998886654
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-67 Score=612.06 Aligned_cols=449 Identities=26% Similarity=0.408 Sum_probs=354.2
Q ss_pred CchHHHHHHHHHhhhH---HHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHH-HHHHHhhhhhHHHHHHHHhccc
Q 003452 140 SKSLFYFVVDALKDLT---ILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLV-IAVSAGSNFTQNRQFDKFSKVS 215 (819)
Q Consensus 140 ~~~~~~~~~~~~~~~~---~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~-~~v~~~~~~~~~~~~~~l~~~~ 215 (819)
+.+|++-.|+.++... ..+..++++.+++++.+..-.. .||+..+++++++++ -+++....-+..++.++|.++.
T Consensus 131 g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s~~~~~~~-~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~ 209 (713)
T COG2217 131 GWPFYRGAWRALRRGRLNMDTLVALATIGAYAYSLYATLFP-VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLA 209 (713)
T ss_pred hHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 6778888888888763 2334444445555554321111 466666666655544 4555555556666666777765
Q ss_pred CCcceEEEe-CCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeEeecccccc
Q 003452 216 NNIQIDVIR-NGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVAD 294 (819)
Q Consensus 216 ~~~~~~V~R-dG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~ 294 (819)
++ .+++++ ||++++||++||++||+|.|+|||+||+||++++|++ .||||++||||.||+|. .|+.|++||.|.+
T Consensus 210 p~-~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~--~Gd~V~aGtiN~~ 285 (713)
T COG2217 210 PK-TATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKK--PGDEVFAGTVNLD 285 (713)
T ss_pred CC-EEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecC--CCCEEeeeEEECC
Confidence 44 676665 6669999999999999999999999999999999999 99999999999999999 5899999999999
Q ss_pred ceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHhcc------------------
Q 003452 295 GYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLLKK------------------ 356 (819)
Q Consensus 295 G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~------------------ 356 (819)
|..+++|+++|.+|.+++|++++++++..|+|.|+.+|+++.+++|+.+++++++|++|...
T Consensus 286 G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVI 365 (713)
T COG2217 286 GSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGGDWETALYRALAVLVI 365 (713)
T ss_pred ccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheee
Confidence 99999999999999999999999999999999999999999999999999999999877400
Q ss_pred -------------------CCCceEEEecchH--HHHHHhhhhcccccCCcc----------cCCHHHHHHHHHHHHHhh
Q 003452 357 -------------------TDNTSHVHWKGAA--EMILAMCSSYYDASGNIK----------YLDDNEKERFQQIIQGMA 405 (819)
Q Consensus 357 -------------------~~~~~~~~~KGa~--e~il~~c~~~~~~~g~~~----------~l~~~~~~~~~~~i~~~a 405 (819)
..-+..++.||.. |.+-+.-+-.+||+|+++ +.++ ..+++......+.
T Consensus 366 aCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-~e~~~L~laAalE 444 (713)
T COG2217 366 ACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-DEDELLALAAALE 444 (713)
T ss_pred eCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-CHHHHHHHHHHHH
Confidence 0001124556533 444444455688888865 2221 2223333333444
Q ss_pred hCCceeeeeeccc---------------CCccccc----------------------ch--hhh----h------hhccc
Q 003452 406 SSSLRCIAFAHKQ---------------VPEEEHR----------------------NE--KDQ----K------KLIED 436 (819)
Q Consensus 406 ~~glr~l~~a~~~---------------~~~~~~~----------------------~~--~~~----~------~~~e~ 436 (819)
..+.|+++-|... ++..+.. .. ... . -....
T Consensus 445 ~~S~HPiA~AIv~~a~~~~~~~~~~~~~i~G~Gv~~~v~g~~v~vG~~~~~~~~~~~~~~~~~~~~~~~~~G~t~v~va~ 524 (713)
T COG2217 445 QHSEHPLAKAIVKAAAERGLPDVEDFEEIPGRGVEAEVDGERVLVGNARLLGEEGIDLPLLSERIEALESEGKTVVFVAV 524 (713)
T ss_pred hcCCChHHHHHHHHHHhcCCCCccceeeeccCcEEEEECCEEEEEcCHHHHhhcCCCccchhhhHHHHHhcCCeEEEEEE
Confidence 4444444333111 1100000 00 000 0 12345
Q ss_pred CcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHH
Q 003452 437 NLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERME 516 (819)
Q Consensus 437 ~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~ 516 (819)
|..++|+++++|++||+++++|++||+.|+++.|+||||..+|++||+++||.+
T Consensus 525 dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~-------------------------- 578 (713)
T COG2217 525 DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE-------------------------- 578 (713)
T ss_pred CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh--------------------------
Confidence 778999999999999999999999999999999999999999999999999965
Q ss_pred HhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 517 KVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 517 ~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
++|.+.|+||.++|+.||++|++|+|+|||+||+|||++|||||||| +|||+|+|+||++|++|++..+++++
T Consensus 579 ------v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 579 ------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred ------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999 79999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 597 RWGRCVHTNIQKLIQFQLTANVAALLINFVA 627 (819)
Q Consensus 597 ~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~ 627 (819)
+.+|+++++|+||+.|++.||+++++++..+
T Consensus 652 ~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 652 DLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998877
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-68 Score=577.32 Aligned_cols=491 Identities=23% Similarity=0.360 Sum_probs=413.2
Q ss_pred hcCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcc
Q 003452 98 FGGIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLK 177 (819)
Q Consensus 98 ~ggv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~ 177 (819)
-+.++.+-+.|..+.+ ||+++| +++|++.||.|++.+++...|.+|+ .-+.+|.-+..-.+|+....+. ...|.+
T Consensus 20 ~~p~eeVfeeL~~t~~-GLt~~E--~~eRlk~fG~NkleEkken~~lKFl-~Fm~~PlswVMEaAAimA~~La-ng~~~~ 94 (942)
T KOG0205|consen 20 AIPIEEVFEELLCTRE-GLTSDE--VEERLKIFGPNKLEEKKESKFLKFL-GFMWNPLSWVMEAAAIMAIGLA-NGGGRP 94 (942)
T ss_pred cCchhhhHHHHhcCCC-CCchHH--HHHHHHhhCchhhhhhhhhHHHHHH-HHHhchHHHHHHHHHHHHHHHh-cCCCCC
Confidence 4578888888876644 999988 9999999999999988777666664 5566777777777777765443 124555
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEE
Q 003452 178 EGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFL 257 (819)
Q Consensus 178 ~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll 257 (819)
..|.|.+.|...++++..++.+++|+.....++|.+-.. .++.|+|||+|.++.+++||||||+.++.||+|||||+++
T Consensus 95 ~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA-~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl 173 (942)
T KOG0205|consen 95 PDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLA-PKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLL 173 (942)
T ss_pred cchhhhhhhheeeeecceeeeeeccccchHHHHHHhccC-cccEEeecCeeeeeeccccccCceeeeccCCEecCcccee
Confidence 679999999999999999999999999999999986544 3789999999999999999999999999999999999999
Q ss_pred eccceeEecccccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhh
Q 003452 258 DGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSS 337 (819)
Q Consensus 258 ~g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 337 (819)
+|.-|+||+|+|||||.||.|. .|+.+||||+|.+|++.|+|++||.+|..||-++++.. .+....+|+-++.+..+
T Consensus 174 ~gD~LkiDQSAlTGESLpvtKh--~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ 250 (942)
T KOG0205|consen 174 EGDPLKIDQSALTGESLPVTKH--PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNF 250 (942)
T ss_pred cCCccccchhhhcCCccccccC--CCCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhH
Confidence 9999999999999999999999 48889999999999999999999999999999999976 77788999999998887
Q ss_pred HhHHHHHHHHHHHHHHh---------------------------------------------------------------
Q 003452 338 TGKIGLAVAFLVLAVLL--------------------------------------------------------------- 354 (819)
Q Consensus 338 ~~~~~l~~a~l~~~v~~--------------------------------------------------------------- 354 (819)
......+--++.+++.+
T Consensus 251 ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVL 330 (942)
T KOG0205|consen 251 CICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVL 330 (942)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEE
Confidence 65433222222222211
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 331 CSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV~Kr 410 (942)
T KOG0205|consen 331 CSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPVDKR 410 (942)
T ss_pred eecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCccccc
Confidence
Q ss_pred -----ccCCCceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhh
Q 003452 355 -----KKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKD 429 (819)
Q Consensus 355 -----~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~ 429 (819)
.+++|+.+...|||||.+++.|.. +.+.++++.+.+++||++|+|.+++|++..+++.
T Consensus 411 ta~ty~d~dG~~~r~sKGAPeqil~l~~~-----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~------ 473 (942)
T KOG0205|consen 411 TALTYIDPDGNWHRVSKGAPEQILKLCNE-----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKT------ 473 (942)
T ss_pred eEEEEECCCCCEEEecCCChHHHHHHhhc-----------cCcchHHHHHHHHHHHHhcchhhhhhhhcccccc------
Confidence 356777778899999999999975 3556888999999999999999999999987642
Q ss_pred hhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceeccccc-cc
Q 003452 430 QKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEF-RN 508 (819)
Q Consensus 430 ~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~-~~ 508 (819)
.+.......++|+.-+-||+|.+..++|++....|++|.|+|||...-++..++++|+-....+ ...+-|.+- .+
T Consensus 474 -~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyp---ss~llG~~~~~~ 549 (942)
T KOG0205|consen 474 -KESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP---SSALLGLGKDGS 549 (942)
T ss_pred -ccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCC---chhhccCCCCCC
Confidence 2233456789999999999999999999999999999999999999999999999998764211 111222211 12
Q ss_pred CCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCC
Q 003452 509 YTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588 (819)
Q Consensus 509 ~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~ 588 (819)
+...+..+.+++..=||.+.|++|.++|+.||++||.|+|+|||+||+||||.||+|||+. .+||.|+.+||+|+....
T Consensus 550 ~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepg 628 (942)
T KOG0205|consen 550 MPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPG 628 (942)
T ss_pred CCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCC
Confidence 3334556677777789999999999999999999999999999999999999999999999 899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 589 FASVARVLRWGRCVHTNIQKLIQFQLTANVA 619 (819)
Q Consensus 589 f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~ 619 (819)
++.+..++..+|.+|++++.+..|.+...+-
T Consensus 629 lSviI~avltSraIfqrmknytiyavsitir 659 (942)
T KOG0205|consen 629 LSVIISAVLTSRAIFQRMKNYTIYAVSITIR 659 (942)
T ss_pred chhhHHHHHHHHHHHHHHhhheeeeehhHHH
Confidence 9999999999999999999998887765543
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-66 Score=605.23 Aligned_cols=407 Identities=25% Similarity=0.382 Sum_probs=339.4
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHhhcc--c---CcccchhhH---HHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcc
Q 003452 148 VDALKDLTILILLGCAVLSLAFGIKE--H---GLKEGWYEG---GSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQ 219 (819)
Q Consensus 148 ~~~~~~~~~~il~v~a~~s~~~g~~~--~---g~~~~~~~~---~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~ 219 (819)
..+|+||++++|++++++|+++++.. . +...+||++ +.+++.+++..+++++.+++.++++++|.+..++..
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 35789999999999999999998642 1 222358875 445555667778899999999999999998876656
Q ss_pred eEEEe-CCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCC-CeEeeccccccceE
Q 003452 220 IDVIR-NGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQN-PFLFSGTKVADGYA 297 (819)
Q Consensus 220 ~~V~R-dG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~-~~l~sGt~v~~G~~ 297 (819)
++|+| ||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.||.|+++.. +.+|+||.|.+|.+
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~ 185 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDESAITGESAPVIKESGGDFASVTGGTRILSDWL 185 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccE-EEEcccccCCCCceeecCCCCcceeecCcEEEeeEE
Confidence 88885 8999999999999999999999999999999999975 999999999999999996321 24999999999999
Q ss_pred EEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHH-------------------Hh----
Q 003452 298 RMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAV-------------------LL---- 354 (819)
Q Consensus 298 ~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v-------------------~~---- 354 (819)
+++|+++|.+|++|||++++++++.++||+|..++.+...+..+.+++.+..+.. .+
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~~~~~~~~~~~lvallV~aiP~aL 265 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFAAYGGNAISVTVLVALLVCLIPTTI 265 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHhCchhh
Confidence 9999999999999999999999999999999999988776654433222111110 00
Q ss_pred --------------------------------------ccCCCce-----------------------------------
Q 003452 355 --------------------------------------KKTDNTS----------------------------------- 361 (819)
Q Consensus 355 --------------------------------------~~~~~~~----------------------------------- 361 (819)
.|++|+.
T Consensus 266 g~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~aa~~~~~s~hP 345 (675)
T TIGR01497 266 GGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGVDEKTLADAAQLASLADDTP 345 (675)
T ss_pred hhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCCcHHHHHHHHHHhcCCCCCc
Confidence 2333210
Q ss_pred -------------------------------------------EEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHH
Q 003452 362 -------------------------------------------HVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQ 398 (819)
Q Consensus 362 -------------------------------------------~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 398 (819)
..+.||++|.+++.|.. +|.. ...++.
T Consensus 346 ~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~~g~~~~kGa~e~i~~~~~~----~g~~------~~~~~~ 415 (675)
T TIGR01497 346 EGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDNGRMIRKGAVDAIKRHVEA----NGGH------IPTDLD 415 (675)
T ss_pred HHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEeCCeEEEECCHHHHHHHHHh----cCCC------CcHHHH
Confidence 12344555554444431 1111 113456
Q ss_pred HHHHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHH
Q 003452 399 QIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFT 478 (819)
Q Consensus 399 ~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~t 478 (819)
+.+++++++|+|++++|+ |.+++|+++++||+|||++++|++|+++|++++|+||||..|
T Consensus 416 ~~~~~~a~~G~r~l~va~--------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~t 475 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCE--------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLT 475 (675)
T ss_pred HHHHHHHhCCCeEEEEEE--------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence 677889999999999984 247999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHH
Q 003452 479 AKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPA 558 (819)
Q Consensus 479 a~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~a 558 (819)
|.++|+++||.+ ++||++|+||.++|+.+|++|+.|+|+|||+||+||
T Consensus 476 a~~iA~~lGI~~--------------------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapA 523 (675)
T TIGR01497 476 AAAIAAEAGVDD--------------------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPA 523 (675)
T ss_pred HHHHHHHcCCCE--------------------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHH
Confidence 999999999965 799999999999999999999999999999999999
Q ss_pred hhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 559 LKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANV 618 (819)
Q Consensus 559 L~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv 618 (819)
|++|||||||| +|+++||++||++++||||++|+++++|||+++.+......|++..++
T Consensus 524 L~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~ 582 (675)
T TIGR01497 524 LAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDV 582 (675)
T ss_pred HHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccH
Confidence 99999999999 999999999999999999999999999999999999999999987655
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-62 Score=545.92 Aligned_cols=656 Identities=20% Similarity=0.248 Sum_probs=488.7
Q ss_pred CCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHH
Q 003452 114 AGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLV 193 (819)
Q Consensus 114 ~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~ 193 (819)
+|+. ++.+++.-++.||.|.+..+ ..+|.+++.+.-..|++.++.+|..+|..-. .||.++.-+ +..
T Consensus 161 ~G~~-~~~~i~~a~~~~G~N~fdi~-vPtF~eLFkE~A~aPfFVFQVFcvgLWCLDe--------yWYySlFtL---fMl 227 (1160)
T KOG0209|consen 161 TGHE-EESEIKLAKHKYGKNKFDIV-VPTFSELFKEHAVAPFFVFQVFCVGLWCLDE--------YWYYSLFTL---FML 227 (1160)
T ss_pred cCcc-hHHHHHHHHHHhcCCccccC-CccHHHHHHHhccCceeeHhHHhHHHHHhHH--------HHHHHHHHH---HHH
Confidence 5776 44567777788999999886 7889999999999999999999999997543 799875433 334
Q ss_pred HHHHHhhhhhHHHHHHHHhcccC-CcceEEEeCCEEEEEecCccccCCEEEEec---CCeeccceEEEeccceeEecccc
Q 003452 194 IAVSAGSNFTQNRQFDKFSKVSN-NIQIDVIRNGRRQQISIFEIVVGDVICLKI---GDQVPANGLFLDGHSLQVDESSM 269 (819)
Q Consensus 194 ~~v~~~~~~~~~~~~~~l~~~~~-~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~---Gd~VPaDg~ll~g~~l~VDES~L 269 (819)
+.+++..-+++.+.+.+++++.+ +..+.|+|+++|+.+..+||+|||+|.+.. ...||||.+++.|++ .|||++|
T Consensus 228 i~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaML 306 (1160)
T KOG0209|consen 228 IAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAML 306 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhh
Confidence 55677778888888888888754 458999999999999999999999999977 458999999999998 8999999
Q ss_pred cCCCceeeecCC---------------CCCeEeeccccc-------------cceEEEEEEEeCCcChHHHHHHHhhhcC
Q 003452 270 TGESDHVEVNSS---------------QNPFLFSGTKVA-------------DGYARMLATSVGMNTTWGQMMSQISRDN 321 (819)
Q Consensus 270 TGES~pv~k~~~---------------~~~~l~sGt~v~-------------~G~~~~~V~~vG~~T~~g~i~~~~~~~~ 321 (819)
||||.|..|.+- +.+.+|+||++. +|.+.+.|++||.+|..|++++.+-...
T Consensus 307 tGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~a 386 (1160)
T KOG0209|consen 307 TGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSA 386 (1160)
T ss_pred cCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecc
Confidence 999999999752 346899999986 4889999999999999999999987765
Q ss_pred CCCChhHHHHHHHHhhHhHHHHHHHHHHHH-HHh----------------------------------------------
Q 003452 322 SEQTPLQARLNKLTSSTGKIGLAVAFLVLA-VLL---------------------------------------------- 354 (819)
Q Consensus 322 ~~~tplq~~l~~~a~~~~~~~l~~a~l~~~-v~~---------------------------------------------- 354 (819)
++-|.-.+. .+ .+..+.+++|++... +|.
T Consensus 387 ervTaNn~E--tf--~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak 462 (1160)
T KOG0209|consen 387 ERVTANNRE--TF--IFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAK 462 (1160)
T ss_pred eeeeeccHH--HH--HHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHH
Confidence 555543322 12 222222233332221 121
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 463 ~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPl 542 (1160)
T KOG0209|consen 463 LGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPL 542 (1160)
T ss_pred hceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChH
Confidence
Q ss_pred -------------------------------------------------ccCC--CceEEEecchHHHHHHhhhhccccc
Q 003452 355 -------------------------------------------------KKTD--NTSHVHWKGAAEMILAMCSSYYDAS 383 (819)
Q Consensus 355 -------------------------------------------------~~~~--~~~~~~~KGa~e~il~~c~~~~~~~ 383 (819)
..+. -++.+.+|||||.+-.+...
T Consensus 543 EKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----- 617 (1160)
T KOG0209|consen 543 EKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----- 617 (1160)
T ss_pred HHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh-----
Confidence 0111 13556678888887766543
Q ss_pred CCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCccccc-chhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHH
Q 003452 384 GNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHR-NEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQ 462 (819)
Q Consensus 384 g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~-~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~ 462 (819)
.+..+.+...+|+++|.||+|++||++..-..+ ....+++.+|+||+|.|++.|.-|+|+|++++|+.++
T Consensus 618 ---------vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~ 688 (1160)
T KOG0209|consen 618 ---------VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELN 688 (1160)
T ss_pred ---------CchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHh
Confidence 345678889999999999999999999742211 1224577899999999999999999999999999999
Q ss_pred hcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC------------------------------------CCccceeccccc
Q 003452 463 YAGVNIKMITGDNVFTAKAIATECGILKPGQD------------------------------------TSTGAVLEGEEF 506 (819)
Q Consensus 463 ~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~------------------------------------~~~~~vi~g~~~ 506 (819)
+++++++|+||||+.||.++|+++||...... ..+.++++|..+
T Consensus 689 ~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l 768 (1160)
T KOG0209|consen 689 NSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSAL 768 (1160)
T ss_pred ccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHH
Confidence 99999999999999999999999999865110 124567788888
Q ss_pred ccCCH-HHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHH---------
Q 003452 507 RNYTH-EERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVA--------- 576 (819)
Q Consensus 507 ~~~~~-~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~a--------- 576 (819)
+.+.. +.+++.++++.||||+.|.||..++..|++.|+.++|+|||+||+.|||+||||||+- ++.+.+
T Consensus 769 ~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL-~~~~e~~~~~~~~~~ 847 (1160)
T KOG0209|consen 769 DHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL-NNPEESKKDKEKRRK 847 (1160)
T ss_pred HHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh-cCChhhhhHHhhhhh
Confidence 77654 4578889999999999999999999999999999999999999999999999999986 222200
Q ss_pred --------------------------------------------------------------HhhcCEEEeCCChhHHHH
Q 003452 577 --------------------------------------------------------------KESSDIVILDDNFASVAR 594 (819)
Q Consensus 577 --------------------------------------------------------------k~aaDivl~dd~f~~i~~ 594 (819)
.-||.+.-.-.+.+++-+
T Consensus 848 ~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~ 927 (1160)
T KOG0209|consen 848 KKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTH 927 (1160)
T ss_pred hccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHH
Confidence 001223333346788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCC
Q 003452 595 VLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRT 674 (819)
Q Consensus 595 ~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~ 674 (819)
+|+.||++..+.-|.+.. +..|...... ..+.++.-..-++..|...-.+++. ...+.+...+|-+++.+.+| .
T Consensus 928 IIrQGRctLVtTlQMfKI-LALN~LisAY-slSvlyldGVKfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP---~ 1001 (1160)
T KOG0209|consen 928 IIRQGRCTLVTTLQMFKI-LALNCLISAY-SLSVLYLDGVKFGDTQATISGLLLA-ACFLFISRSKPLETLSKERP---L 1001 (1160)
T ss_pred HHHhcchhHHHHHHHHHH-HHHHHHHHHH-HHHHhhhcCceecchhHhHHHHHHH-HHHhheecCCchhhHhhcCC---C
Confidence 999999999988877654 3445543322 2334455556677777766555543 34667788899999999888 4
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHhhccc----c------CCcchhhhHHHHHHHHHHHHHHHHhhhccccccccc
Q 003452 675 EPLITNIMWRNLVAQALYQRAVLLTLQFRGESI----F------GVNKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFE 744 (819)
Q Consensus 675 ~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~~~----~------~~~~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~ 744 (819)
.++++.....++++|-..+++.++++.-..... . ..+++..||.+|..-...|+.... -.+.+.+|.+
T Consensus 1002 ~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTFA--VNY~G~PF~E 1079 (1160)
T KOG0209|consen 1002 PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTFA--VNYQGRPFRE 1079 (1160)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHhh--hhccCcchhh
Confidence 468999888888888888888776654222111 1 113778899999888888886532 2234788889
Q ss_pred cccchHHHHHHHHHHHHHHHHHH----HHHhHccccccCChhhHHH----HHHHHHHHHHHHHHHhhccCCCCc
Q 003452 745 GIHKNRLFLGIIGTTIVLQVVMV----EFLKNFADTERLNWGQWSA----CIGFAAASWPIGWLVKCIPVPAKP 810 (819)
Q Consensus 745 ~~~~n~~~~~~i~~~~~~~~~~v----~~~~~~f~~~~l~~~~w~~----~~~~~~~~~~~~~~~k~i~~~~~~ 810 (819)
++..|+.+.+.++++.++.+.++ +-++..|.+.+++-..-.. .++--++++.+..+.+++-...+|
T Consensus 1080 sl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~~~k~ 1153 (1160)
T KOG0209|consen 1080 SLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFFGDHKP 1153 (1160)
T ss_pred hhhhccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCc
Confidence 99999988888877766555443 3467788898887433222 222223456666666665444333
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-63 Score=563.91 Aligned_cols=487 Identities=23% Similarity=0.342 Sum_probs=375.6
Q ss_pred CCchHHHHHHHHHhhhH---HHHHHHHHHHHHHHhhcc------cCcccchhhHHHHHHHHHHH-HHHHHhhhhhHHHHH
Q 003452 139 PSKSLFYFVVDALKDLT---ILILLGCAVLSLAFGIKE------HGLKEGWYEGGSILVAVFLV-IAVSAGSNFTQNRQF 208 (819)
Q Consensus 139 ~~~~~~~~~~~~~~~~~---~~il~v~a~~s~~~g~~~------~g~~~~~~~~~~i~~~v~l~-~~v~~~~~~~~~~~~ 208 (819)
-+++|+.-.|.++++.. ..+..+++..++++++.. .+.+..+||...|++.++.+ -+++....++....+
T Consensus 290 ~G~~fy~~A~ksL~~g~~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~al 369 (951)
T KOG0207|consen 290 GGRPFYLAAYKSLKRGSANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITLGRWLESLAKGKTSEAL 369 (951)
T ss_pred cceeeHHHHHHHHhcCCCCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHHHHHHHHHhhccchHHH
Confidence 46788888888888764 223334444444444321 12244588888888776665 456666666667777
Q ss_pred HHHhcccCCcceEEEeCCE-EEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeEe
Q 003452 209 DKFSKVSNNIQIDVIRNGR-RQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLF 287 (819)
Q Consensus 209 ~~l~~~~~~~~~~V~RdG~-~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l~ 287 (819)
.+|.++.+ .++.++.+|+ +.+|+++.|++||+|.|.||++||+||++++|++ .||||++||||.||.|+ .++.|.
T Consensus 370 skLmsl~p-~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk--~gs~Vi 445 (951)
T KOG0207|consen 370 SKLMSLAP-SKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLITGESMPVPKK--KGSTVI 445 (951)
T ss_pred HHHhhcCc-ccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhccCCceecccC--CCCeee
Confidence 77777754 4788888886 8999999999999999999999999999999999 99999999999999999 588999
Q ss_pred eccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh-------------
Q 003452 288 SGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL------------- 354 (819)
Q Consensus 288 sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~------------- 354 (819)
+||.+.+|...+.+|++|.+|.+++|.+++++++..++|+|+.+|+++.+++|+.+++++.+|++|.
T Consensus 446 aGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~ 525 (951)
T KOG0207|consen 446 AGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSF 525 (951)
T ss_pred eeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchh
Confidence 9999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred -------------------------ccCC---------CceEEEecchH-HHHHHhhh-hcccccCCccc----------
Q 003452 355 -------------------------KKTD---------NTSHVHWKGAA-EMILAMCS-SYYDASGNIKY---------- 388 (819)
Q Consensus 355 -------------------------~~~~---------~~~~~~~KGa~-e~il~~c~-~~~~~~g~~~~---------- 388 (819)
..|+ -+..++.||+. -+.+..|+ ..|||+|+++.
T Consensus 526 ~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~ 605 (951)
T KOG0207|consen 526 FDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKS 605 (951)
T ss_pred hHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEe
Confidence 0010 11235678764 23344443 45899998762
Q ss_pred CCH-HHHHHHHHHHHHhhhCCceeeeeec-------------------ccCCccc-----------ccchhhh-------
Q 003452 389 LDD-NEKERFQQIIQGMASSSLRCIAFAH-------------------KQVPEEE-----------HRNEKDQ------- 430 (819)
Q Consensus 389 l~~-~~~~~~~~~i~~~a~~glr~l~~a~-------------------~~~~~~~-----------~~~~~~~------- 430 (819)
+.+ -.+.++...+..+.+..-|+++-|. ...+.++ ...++..
T Consensus 606 ~~~~~~~~e~l~~v~a~Es~SeHPig~AIv~yak~~~~~~~~~~~~~~~~~pg~g~~~~~~~~~~~i~iGN~~~~~r~~~ 685 (951)
T KOG0207|consen 606 LSNPISLKEALALVAAMESGSEHPIGKAIVDYAKEKLVEPNPEGVLSFEYFPGEGIYVTVTVDGNEVLIGNKEWMSRNGC 685 (951)
T ss_pred cCCcccHHHHHHHHHHHhcCCcCchHHHHHHHHHhcccccCccccceeecccCCCcccceEEeeeEEeechHHHHHhcCC
Confidence 222 1122333333333333333333221 1111111 0000000
Q ss_pred --h-----------------hhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCC
Q 003452 431 --K-----------------KLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKP 491 (819)
Q Consensus 431 --~-----------------~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~ 491 (819)
. -...-|.++.|++.++|++|||+..+|+.||+.|+++.|+||||..+|+++|+++||..
T Consensus 686 ~~~~~i~~~~~~~e~~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~- 764 (951)
T KOG0207|consen 686 SIPDDILDALTESERKGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN- 764 (951)
T ss_pred CCchhHHHhhhhHhhcCceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-
Confidence 0 01123667999999999999999999999999999999999999999999999999765
Q ss_pred CCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCC
Q 003452 492 GQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQ 571 (819)
Q Consensus 492 ~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~ 571 (819)
|+|...|+||.+.|+.+|++++.|+|+|||+||+|||.+|||||+|| .
T Consensus 765 -------------------------------V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig-~ 812 (951)
T KOG0207|consen 765 -------------------------------VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIG-A 812 (951)
T ss_pred -------------------------------EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeec-c
Confidence 99999999999999999999999999999999999999999999999 8
Q ss_pred ChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCchhHHHHHHHHhhhh
Q 003452 572 GTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAG--EIPLTAVQLLWVNLIMD 649 (819)
Q Consensus 572 gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~--~~pl~~~qll~vnli~d 649 (819)
|+++|.|+||+||+.||+..++.+++.+|++.++|+.|+.|+++||+++++++....+..+ -.|.-+.-.+..+.+-.
T Consensus 813 gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvsV 892 (951)
T KOG0207|consen 813 GSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVSV 892 (951)
T ss_pred ccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHHH
Confidence 8999999999999999999999999999999999999999999999999998776554333 23434444444555444
Q ss_pred hHhHhhhc-ccCCc
Q 003452 650 TLGALALA-TEKPT 662 (819)
Q Consensus 650 ~l~alal~-~e~p~ 662 (819)
.+.++.|- ..+|+
T Consensus 893 v~sSllLk~~k~p~ 906 (951)
T KOG0207|consen 893 VLSSLLLKRYKKPT 906 (951)
T ss_pred hhhHHHHhhccccc
Confidence 44455443 34554
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-60 Score=567.49 Aligned_cols=439 Identities=24% Similarity=0.332 Sum_probs=344.3
Q ss_pred CchHHHHHHHHHhhh----HHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhccc
Q 003452 140 SKSLFYFVVDALKDL----TILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVS 215 (819)
Q Consensus 140 ~~~~~~~~~~~~~~~----~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~ 215 (819)
..+|++..|+.++.. +-.+..++++.++++| .|.+++.+++++++...++.+.+++.++..++|.++.
T Consensus 170 ~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~--------~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~ 241 (741)
T PRK11033 170 LYPIARKALRLIRSGSPFAIETLMSVAAIGALFIG--------ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALV 241 (741)
T ss_pred HHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 457788888887642 2334445666666665 4778777777777777788888888888888888875
Q ss_pred CCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeEeeccccccc
Q 003452 216 NNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADG 295 (819)
Q Consensus 216 ~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G 295 (819)
+ ..++|+|||++++|++++|+|||+|.|++||+|||||++++|++ .||||+|||||.||+|+ .|+.||+||.+.+|
T Consensus 242 p-~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~-~vdes~lTGEs~Pv~k~--~Gd~V~aGt~~~~G 317 (741)
T PRK11033 242 P-ETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESALTGESIPVERA--TGEKVPAGATSVDR 317 (741)
T ss_pred C-CEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcE-EeecccccCCCCCEecC--CCCeeccCCEEcCc
Confidence 4 47899999999999999999999999999999999999999987 99999999999999999 48899999999999
Q ss_pred eEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh---------------------
Q 003452 296 YARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL--------------------- 354 (819)
Q Consensus 296 ~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~--------------------- 354 (819)
.++++|+++|.+|++|||.+++++++.+++|+|+.+|+++++++++++++++++|++|.
T Consensus 318 ~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlvia 397 (741)
T PRK11033 318 LVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIG 397 (741)
T ss_pred eEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999887651
Q ss_pred ------------------ccCCCceEEEecch-H-HHHHHhhhhcccccCCccc-------------CCHHHHHH-----
Q 003452 355 ------------------KKTDNTSHVHWKGA-A-EMILAMCSSYYDASGNIKY-------------LDDNEKER----- 396 (819)
Q Consensus 355 ------------------~~~~~~~~~~~KGa-~-e~il~~c~~~~~~~g~~~~-------------l~~~~~~~----- 396 (819)
.... ..++.|+. . |.+-+.-.-++||+|+++. ++++..-.
T Consensus 398 cPcaL~latP~a~~~~l~~aar--~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~aa~~ 475 (741)
T PRK11033 398 CPCALVISTPAAITSGLAAAAR--RGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGISESELLALAAAV 475 (741)
T ss_pred chhhhhhhhHHHHHHHHHHHHH--CCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCCHHHHHHHHHHH
Confidence 0001 11334432 2 3333333345778777651 11211111
Q ss_pred -------HHHHHHHhh-hCCc--------eee-eeeccc-CCccccc---------chh--h----h-------hhhccc
Q 003452 397 -------FQQIIQGMA-SSSL--------RCI-AFAHKQ-VPEEEHR---------NEK--D----Q-------KKLIED 436 (819)
Q Consensus 397 -------~~~~i~~~a-~~gl--------r~l-~~a~~~-~~~~~~~---------~~~--~----~-------~~~~e~ 436 (819)
+.+.+.+++ .++. +.+ +.+.+. .++.... ... . . ...+..
T Consensus 476 e~~s~hPia~Ai~~~a~~~~~~~~~~~~~~~~~g~Gv~~~~~g~~~~ig~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~ 555 (741)
T PRK11033 476 EQGSTHPLAQAIVREAQVRGLAIPEAESQRALAGSGIEGQVNGERVLICAPGKLPPLADAFAGQINELESAGKTVVLVLR 555 (741)
T ss_pred hcCCCCHHHHHHHHHHHhcCCCCCCCcceEEEeeEEEEEEECCEEEEEecchhhhhccHHHHHHHHHHHhCCCEEEEEEE
Confidence 111111111 1111 110 000000 0000000 000 0 0 011234
Q ss_pred CcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHH
Q 003452 437 NLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERME 516 (819)
Q Consensus 437 ~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~ 516 (819)
|.+++|+++++|++|||++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 556 ~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~--------------------------- 608 (741)
T PRK11033 556 NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID--------------------------- 608 (741)
T ss_pred CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---------------------------
Confidence 77899999999999999999999999999999999999999999999999995
Q ss_pred HhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 517 KVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 517 ~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
.+++.+|+||..+|+.+++. +.|+|+|||.||+|||++|||||+|| +++++++++||++++++++..+.+++
T Consensus 609 ------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 609 ------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMI 680 (741)
T ss_pred ------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 36788999999999999965 58999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 597 RWGRCVHTNIQKLIQFQLTANVAALLINFVA 627 (819)
Q Consensus 597 ~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~ 627 (819)
++||++++||++|+.|++.||++.+++++++
T Consensus 681 ~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g 711 (741)
T PRK11033 681 ELSRATHANIRQNITIALGLKAIFLVTTLLG 711 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998888765
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-58 Score=533.14 Aligned_cols=428 Identities=26% Similarity=0.382 Sum_probs=340.4
Q ss_pred HHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCcc
Q 003452 157 LILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEI 236 (819)
Q Consensus 157 ~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~L 236 (819)
.++.+++++++++| .|+|+..|++++++..+++.+.+++.++..++|.+..+ .+++|+|||++++|++++|
T Consensus 3 ~l~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~-~~~~v~r~g~~~~i~~~~l 73 (536)
T TIGR01512 3 LLMALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAP-DTARVLRGGSLEEVAVEEL 73 (536)
T ss_pred HHHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCEEEEEEHHHC
Confidence 34567777777777 69999888888877888888888888888888887644 5799999999999999999
Q ss_pred ccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHH
Q 003452 237 VVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQ 316 (819)
Q Consensus 237 vvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~ 316 (819)
+|||+|.+++||+|||||++++|++ .||||+|||||.|+.|+ .++.+|+||.+.+|+++++|+++|.+|++||+.++
T Consensus 74 ~~GDiv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~--~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~ 150 (536)
T TIGR01512 74 KVGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKA--PGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNL 150 (536)
T ss_pred CCCCEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeC--CCCEEEeeeEECCceEEEEEEEeccccHHHHHHHH
Confidence 9999999999999999999999987 99999999999999999 48899999999999999999999999999999999
Q ss_pred hhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHhccCC------------------C-----------------ce
Q 003452 317 ISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLLKKTD------------------N-----------------TS 361 (819)
Q Consensus 317 ~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~------------------~-----------------~~ 361 (819)
+.+.+.+++|+|+.+++++.+++++.+++++++++++..... + +.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~ 230 (536)
T TIGR01512 151 VEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKRWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARH 230 (536)
T ss_pred HHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHC
Confidence 998888999999999999999999999888888776541000 0 01
Q ss_pred EEEecchH--HHHHHhhhhcccccCCcccCCHH----HHHHHHHHHHHhhhCCceeeeeecc-------------cC---
Q 003452 362 HVHWKGAA--EMILAMCSSYYDASGNIKYLDDN----EKERFQQIIQGMASSSLRCIAFAHK-------------QV--- 419 (819)
Q Consensus 362 ~~~~KGa~--e~il~~c~~~~~~~g~~~~l~~~----~~~~~~~~i~~~a~~glr~l~~a~~-------------~~--- 419 (819)
.+++|+.. |.+-....-++||+|+++.-..+ ...++............++++.|.. .+
T Consensus 231 gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~l~~a~~~e~~~~hp~~~Ai~~~~~~~~~~~~~~~~~g~ 310 (536)
T TIGR01512 231 GILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPAEVLRLAAAAEQASSHPLARAIVDYARKRENVESVEEVPGE 310 (536)
T ss_pred CeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCcceEEecCC
Confidence 12333221 22222223346777776521100 0001111100111111111111100 00
Q ss_pred ------Ccccccchh----------------hhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCC-cEEEEcCCCH
Q 003452 420 ------PEEEHRNEK----------------DQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGV-NIKMITGDNV 476 (819)
Q Consensus 420 ------~~~~~~~~~----------------~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI-~v~mlTGD~~ 476 (819)
.+.....+. .....+..|..++|.+.++|++||+++++|++|+++|+ ++.|+|||+.
T Consensus 311 gi~~~~~g~~~~ig~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~ 390 (536)
T TIGR01512 311 GVRAVVDGGEVRIGNPRSLEAAVGARPESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRR 390 (536)
T ss_pred eEEEEECCeEEEEcCHHHHhhcCCcchhhCCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCH
Confidence 000000000 00112456789999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCH
Q 003452 477 FTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDA 556 (819)
Q Consensus 477 ~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~ 556 (819)
.++..+++++|+.. +|++..|++|.++++.++++++.|+|+|||.||+
T Consensus 391 ~~a~~i~~~lgi~~--------------------------------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~ 438 (536)
T TIGR01512 391 AVAERVARELGIDE--------------------------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDA 438 (536)
T ss_pred HHHHHHHHHcCChh--------------------------------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHH
Confidence 99999999999965 6889999999999999999999999999999999
Q ss_pred HHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 557 PALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAA 628 (819)
Q Consensus 557 ~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~ 628 (819)
+|+++||+|++||.++++.++++||++++++++..+.+++++||++++|+++|+.|++.||++.+++++.+.
T Consensus 439 ~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~ 510 (536)
T TIGR01512 439 PALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGV 510 (536)
T ss_pred HHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999966899999999999999999999999999999999999999999999999999888764
|
. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-57 Score=530.50 Aligned_cols=450 Identities=24% Similarity=0.371 Sum_probs=346.8
Q ss_pred CchHHHHHHHHHhhhH---HHHHHHHHHHHHHHhhcc--------cCcccchhhHHHHHHHHHHH-HHHHHhhhhhHHHH
Q 003452 140 SKSLFYFVVDALKDLT---ILILLGCAVLSLAFGIKE--------HGLKEGWYEGGSILVAVFLV-IAVSAGSNFTQNRQ 207 (819)
Q Consensus 140 ~~~~~~~~~~~~~~~~---~~il~v~a~~s~~~g~~~--------~g~~~~~~~~~~i~~~v~l~-~~v~~~~~~~~~~~ 207 (819)
..+|++-.|++++... -.+..++.+.+++++.+. .+..++||+++++++++++. -+++....++.++.
T Consensus 2 g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~ 81 (562)
T TIGR01511 2 GRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASDA 81 (562)
T ss_pred cHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3577788888776432 233344444445544321 11224688988887766655 46676766777777
Q ss_pred HHHHhcccCCcceEEEeC-CEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeE
Q 003452 208 FDKFSKVSNNIQIDVIRN-GRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFL 286 (819)
Q Consensus 208 ~~~l~~~~~~~~~~V~Rd-G~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l 286 (819)
.++|.+..+ .+++++|+ |++++|++++|+|||+|.|++||+|||||++++|++ .||||+|||||.|+.|. .++.|
T Consensus 82 ~~~L~~~~p-~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~-~vdes~lTGEs~pv~k~--~gd~V 157 (562)
T TIGR01511 82 LSKLAKLQP-STATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKK--VGDPV 157 (562)
T ss_pred HHHHHhcCC-CEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECce-EEehHhhcCCCCcEEcC--CCCEE
Confidence 777777643 47888875 777999999999999999999999999999999998 99999999999999999 48999
Q ss_pred eeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh------------
Q 003452 287 FSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL------------ 354 (819)
Q Consensus 287 ~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~------------ 354 (819)
|+||.|.+|+++++|+++|.+|.+|||.+++++++.+++|+|+.+++++++++++.+++|++++++|.
T Consensus 158 ~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~~~svlvv 237 (562)
T TIGR01511 158 IAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLFALEFAVTVLII 237 (562)
T ss_pred EeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888877653
Q ss_pred -------------------ccCCCceEEEecchH--HHHHHhhhhcccccCCccc----------CCHHHHHHHHHHHHH
Q 003452 355 -------------------KKTDNTSHVHWKGAA--EMILAMCSSYYDASGNIKY----------LDDNEKERFQQIIQG 403 (819)
Q Consensus 355 -------------------~~~~~~~~~~~KGa~--e~il~~c~~~~~~~g~~~~----------l~~~~~~~~~~~i~~ 403 (819)
.....+ +++|+.. |.+-..-.-++||+|+++. .++...+++......
T Consensus 238 acPcaL~la~p~a~~~~~~~aa~~g--Ilik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~~~~~l~~aa~ 315 (562)
T TIGR01511 238 ACPCALGLATPTVIAVATGLAAKNG--VLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDRDRTELLALAAA 315 (562)
T ss_pred hccchhhhHHHHHHHHHHHHHHHCC--eEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCCCHHHHHHHHHH
Confidence 011111 3445432 3333333345788887652 111111122222222
Q ss_pred hhhCCceeeeeecc-----------------cCCccc---------ccch-------------h-h----hhhhcccCcE
Q 003452 404 MASSSLRCIAFAHK-----------------QVPEEE---------HRNE-------------K-D----QKKLIEDNLT 439 (819)
Q Consensus 404 ~a~~glr~l~~a~~-----------------~~~~~~---------~~~~-------------~-~----~~~~~e~~l~ 439 (819)
+.....++++-|.. .++..+ ...+ . . ....+..|.+
T Consensus 316 ~e~~s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~g~Gi~~~~~g~~~~iG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 395 (562)
T TIGR01511 316 LEAGSEHPLAKAIVSYAKEKGITLVEVSDFKAIPGIGVEGTVEGTKIQLGNEKLLGENAIKIDGKAEQGSTSVLVAVNGE 395 (562)
T ss_pred HhccCCChHHHHHHHHHHhcCCCcCCCCCeEEECCceEEEEECCEEEEEECHHHHHhCCCCCChhhhCCCEEEEEEECCE
Confidence 22222233222110 000000 0000 0 0 0012345789
Q ss_pred EEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhh
Q 003452 440 LLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVD 519 (819)
Q Consensus 440 ~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~ 519 (819)
++|.+.++|++||+++++|++|++.|+++.|+|||+..++..+++++||.
T Consensus 396 ~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------ 445 (562)
T TIGR01511 396 LAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------------ 445 (562)
T ss_pred EEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------------------------
Confidence 99999999999999999999999999999999999999999999999993
Q ss_pred hhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 003452 520 KICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWG 599 (819)
Q Consensus 520 ~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~g 599 (819)
++++..|++|.++++.++++++.|+|+|||.||+||+++||+||+|| .+++.++++||++++++++..+.+++++|
T Consensus 446 ---~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~ls 521 (562)
T TIGR01511 446 ---VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLS 521 (562)
T ss_pred ---EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHH
Confidence 57888999999999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 600 RCVHTNIQKLIQFQLTANVAALLINFVAAV 629 (819)
Q Consensus 600 R~~~~ni~k~i~f~l~~nv~~i~~~~~~~~ 629 (819)
|+++++|++|+.|+++||++.+++++.+.+
T Consensus 522 r~~~~~i~qn~~~a~~~n~~~i~la~~~~~ 551 (562)
T TIGR01511 522 RKTLRRIKQNLLWAFGYNVIAIPIAAGVLY 551 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999888776543
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-56 Score=522.67 Aligned_cols=423 Identities=27% Similarity=0.418 Sum_probs=339.8
Q ss_pred HHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCC-EEEEEecCcc
Q 003452 158 ILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNG-RRQQISIFEI 236 (819)
Q Consensus 158 il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG-~~~~i~~~~L 236 (819)
+..+++++++++| .|.++..+++++++..+++...+++.++..++|.+.. +..++|+||| ++++|+.++|
T Consensus 4 l~~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~-~~~~~v~r~~g~~~~i~~~~l 74 (556)
T TIGR01525 4 LMALATIAAYAMG--------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALA-PSTARVLQGDGSEEEVPVEEL 74 (556)
T ss_pred HHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEECCCeEEEEEHHHC
Confidence 4456666777777 5888888888888888888888888888888887764 3479999995 9999999999
Q ss_pred ccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHH
Q 003452 237 VVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQ 316 (819)
Q Consensus 237 vvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~ 316 (819)
+|||+|.+++||+|||||++++|++ .||||+|||||.|+.|. .++.+|+||.+.+|.++++|+++|.+|++|++.+.
T Consensus 75 ~~GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~--~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~ 151 (556)
T TIGR01525 75 QVGDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKK--EGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKL 151 (556)
T ss_pred CCCCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecC--CcCEEeeceEECCceEEEEEEEecccCHHHHHHHH
Confidence 9999999999999999999999987 99999999999999999 48999999999999999999999999999999999
Q ss_pred hhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh------------------------------------------
Q 003452 317 ISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL------------------------------------------ 354 (819)
Q Consensus 317 ~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~------------------------------------------ 354 (819)
+.+...+++|+|+.+++++.+++++++++++++|++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~g 231 (556)
T TIGR01525 152 VEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGALGALYRALAVLVVACPCALGLATPVAILVAIGVAARRG 231 (556)
T ss_pred HHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCC
Confidence 99988999999999999999999999999888888762
Q ss_pred -------------------ccCCCce-----E---EEe-cch---HHHHHHhhhhcccccCCcccCCHHH----------
Q 003452 355 -------------------KKTDNTS-----H---VHW-KGA---AEMILAMCSSYYDASGNIKYLDDNE---------- 393 (819)
Q Consensus 355 -------------------~~~~~~~-----~---~~~-KGa---~e~il~~c~~~~~~~g~~~~l~~~~---------- 393 (819)
.+++|+. . ++. .+. .+.++..|.... ....||++.+.
T Consensus 232 ilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~~~~~~l~~a~~~e--~~~~hp~~~Ai~~~~~~~~~~ 309 (556)
T TIGR01525 232 ILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASISEEELLALAAALE--QSSSHPLARAIVRYAKKRGLE 309 (556)
T ss_pred ceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCccHHHHHHHHHHHh--ccCCChHHHHHHHHHHhcCCC
Confidence 4566541 1 121 121 566666554221 11122211100
Q ss_pred -HHHHHHHHHHhhhCCceee-------eeecccC---Cccccc-c--hhh-------hhhhcccCcEEEEEEEeeCCCCc
Q 003452 394 -KERFQQIIQGMASSSLRCI-------AFAHKQV---PEEEHR-N--EKD-------QKKLIEDNLTLLGLVGIKDPCRP 452 (819)
Q Consensus 394 -~~~~~~~i~~~a~~glr~l-------~~a~~~~---~~~~~~-~--~~~-------~~~~~e~~l~~lG~v~i~D~lr~ 452 (819)
...+ ..+.....|.+.. .++..++ ...... . ... ..-....|.+++|.+.++|++||
T Consensus 310 ~~~~~--~~~~~~~~gi~~~~~g~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~ 387 (556)
T TIGR01525 310 LPKQE--DVEEVPGKGVEATVDGQEEVRIGNPRLLELAAEPISASPDLLNEGESQGKTVVFVAVDGELLGVIALRDQLRP 387 (556)
T ss_pred ccccc--CeeEecCCeEEEEECCeeEEEEecHHHHhhcCCCchhhHHHHHHHhhCCcEEEEEEECCEEEEEEEecccchH
Confidence 0000 1112223333221 1221111 000000 0 000 00123457799999999999999
Q ss_pred cHHHHHHHHHhcC-CcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhh
Q 003452 453 GVKKAVEDCQYAG-VNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFD 531 (819)
Q Consensus 453 ~v~~aI~~l~~aG-I~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 531 (819)
|+++++++|+++| +++.|+|||+..++.++++++|+.. +|+++.|++
T Consensus 388 g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~--------------------------------~f~~~~p~~ 435 (556)
T TIGR01525 388 EAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE--------------------------------VHAELLPED 435 (556)
T ss_pred hHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe--------------------------------eeccCCHHH
Confidence 9999999999999 9999999999999999999999964 789999999
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHH
Q 003452 532 KLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQ 611 (819)
Q Consensus 532 K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~ 611 (819)
|.++++.+++.++.|+|+|||.||++|+++||+|++|| ++++.+++.||+++.++++..+.+++++||++++||++|+.
T Consensus 436 K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~ 514 (556)
T TIGR01525 436 KLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLA 514 (556)
T ss_pred HHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 003452 612 FQLTANVAALLINFVAAV 629 (819)
Q Consensus 612 f~l~~nv~~i~~~~~~~~ 629 (819)
|+++||++.+++++.+.+
T Consensus 515 ~a~~~N~~~i~~a~~g~~ 532 (556)
T TIGR01525 515 WALGYNLVAIPLAAGGLL 532 (556)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999988876653
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-56 Score=541.05 Aligned_cols=449 Identities=21% Similarity=0.322 Sum_probs=338.7
Q ss_pred CchHHHHHHHHHhhhH---HHHHHHHHHHHHHHhhc--------ccCcccchhhHHHHHHHHHHH-HHHHHhhhhhHHHH
Q 003452 140 SKSLFYFVVDALKDLT---ILILLGCAVLSLAFGIK--------EHGLKEGWYEGGSILVAVFLV-IAVSAGSNFTQNRQ 207 (819)
Q Consensus 140 ~~~~~~~~~~~~~~~~---~~il~v~a~~s~~~g~~--------~~g~~~~~~~~~~i~~~v~l~-~~v~~~~~~~~~~~ 207 (819)
..+|++-.|++++... ..+..+++..+++++++ ..+..+.|||.++++++++++ -+++.....+..+.
T Consensus 234 g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~~~~~ 313 (834)
T PRK10671 234 GGHFYRSAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKA 313 (834)
T ss_pred hHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777776432 33334444444444431 111113488876666554444 56666666666677
Q ss_pred HHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeEe
Q 003452 208 FDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFLF 287 (819)
Q Consensus 208 ~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l~ 287 (819)
.++|.++.+ ..++|+|||++++|++++|+|||+|.|++||+|||||++++|++ .||||+|||||.|+.|. .|+.||
T Consensus 314 ~~~L~~l~p-~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~-~vdeS~lTGEs~pv~k~--~gd~V~ 389 (834)
T PRK10671 314 LEKLLDLTP-PTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEA-WLDEAMLTGEPIPQQKG--EGDSVH 389 (834)
T ss_pred HHHHhccCC-CEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceE-EEeehhhcCCCCCEecC--CCCEEE
Confidence 777777643 57899999999999999999999999999999999999999986 99999999999999999 489999
Q ss_pred eccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHhccCC---------
Q 003452 288 SGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLLKKTD--------- 358 (819)
Q Consensus 288 sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~~~~~--------- 358 (819)
+||.|.+|.++++|+++|.+|.+|||.+++++++..++|+|+.+++++.+++++.++++++++++|.....
T Consensus 390 aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~~~~~~~~~ 469 (834)
T PRK10671 390 AGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPAPQIVYTLV 469 (834)
T ss_pred ecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888887765531000
Q ss_pred -----------------------------CceEEEecchH--HHHHHhhhhcccccCCccc-------------CCHHHH
Q 003452 359 -----------------------------NTSHVHWKGAA--EMILAMCSSYYDASGNIKY-------------LDDNEK 394 (819)
Q Consensus 359 -----------------------------~~~~~~~KGa~--e~il~~c~~~~~~~g~~~~-------------l~~~~~ 394 (819)
.+..+++||.. |.+-+.-.-++||+|+++. +++.+.
T Consensus 470 ~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~~~~~ 549 (834)
T PRK10671 470 IATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVDEAQA 549 (834)
T ss_pred HHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCCCHHHH
Confidence 00113344422 2222222234677776641 111111
Q ss_pred HH------------HHHHHHHhhh---------------CCceee------eeeccc-CCcccccchh-----hh-----
Q 003452 395 ER------------FQQIIQGMAS---------------SSLRCI------AFAHKQ-VPEEEHRNEK-----DQ----- 430 (819)
Q Consensus 395 ~~------------~~~~i~~~a~---------------~glr~l------~~a~~~-~~~~~~~~~~-----~~----- 430 (819)
.. +.+.+-+++. .|.+.. .++..+ +...+..... ..
T Consensus 550 l~~a~~~e~~s~hp~a~Ai~~~~~~~~~~~~~~~~~~~g~Gv~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g 629 (834)
T PRK10671 550 LRLAAALEQGSSHPLARAILDKAGDMTLPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNEQQVDTKALEAEITAQASQG 629 (834)
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHhhCCCCCcccceEecceEEEEEECCEEEEEeCHHHHHHcCCChHHHHHHHHHHHhCC
Confidence 11 0111111111 111110 000000 0000000000 00
Q ss_pred --hhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceeccccccc
Q 003452 431 --KKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRN 508 (819)
Q Consensus 431 --~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~ 508 (819)
...+..|..++|++++.|++||+++++|++|++.|+++.|+|||+..++.++++++||..
T Consensus 630 ~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------------ 691 (834)
T PRK10671 630 ATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------------ 691 (834)
T ss_pred CeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------------
Confidence 011234778999999999999999999999999999999999999999999999999964
Q ss_pred CCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCC
Q 003452 509 YTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588 (819)
Q Consensus 509 ~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~ 588 (819)
++++..|++|.+.++.++++++.|+|+|||.||+||++.||+||+|| ++++.++++||+++++++
T Consensus 692 --------------~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~ 756 (834)
T PRK10671 692 --------------VIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHS 756 (834)
T ss_pred --------------EEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCC
Confidence 78999999999999999999999999999999999999999999999 899999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 589 FASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINF 625 (819)
Q Consensus 589 f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~ 625 (819)
+..|.+++++||+++.+|++|+.|++.||++++.+++
T Consensus 757 ~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 757 LMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988776
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-57 Score=494.09 Aligned_cols=664 Identities=23% Similarity=0.318 Sum_probs=464.6
Q ss_pred HHHhcCCCccCCCCCc--hH-HHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhh
Q 003452 126 RHEAFSSNTYKKPPSK--SL-FYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNF 202 (819)
Q Consensus 126 r~~~~G~N~~~~~~~~--~~-~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~ 202 (819)
++++|-+|.+...+-+ +| ...++++|+...+..+++.+...+.-.+. .|....|+-..+.++ .+..+-+++.++
T Consensus 75 ~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~-ig~l~ty~~pl~fvl--~itl~keavdd~ 151 (1051)
T KOG0210|consen 75 RRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALK-IGYLSTYWGPLGFVL--TITLIKEAVDDL 151 (1051)
T ss_pred ccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchhe-ecchhhhhHHHHHHH--HHHHHHHHHHHH
Confidence 4567788877654332 33 45667888888877776666655543322 222222222222222 122334566666
Q ss_pred hHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEe-----ccceeEecccccCCCceee
Q 003452 203 TQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLD-----GHSLQVDESSMTGESDHVE 277 (819)
Q Consensus 203 ~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~-----g~~l~VDES~LTGES~pv~ 277 (819)
++.+.-+.+++++ .-...|+|...+ +++++++||+|.++.+++||||.++++ |++ .+-+--|.||++...
T Consensus 152 ~r~~rd~~~Nse~---y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~-FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 152 KRRRRDRELNSEK---YTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSC-FIRTDQLDGETDWKL 226 (1051)
T ss_pred HHHHhhhhhhhhh---heeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCce-EEeccccCCccccee
Confidence 6555544444432 223447887665 999999999999999999999999995 444 789999999997655
Q ss_pred ecCC---------------------------------------------CCCeEeeccccccceEEEEEEEeCCcChHHH
Q 003452 278 VNSS---------------------------------------------QNPFLFSGTKVADGYARMLATSVGMNTTWGQ 312 (819)
Q Consensus 278 k~~~---------------------------------------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~ 312 (819)
|-+- -.|.++++|.|.+|.+.+.|+.||.+|..
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 4320 24689999999999999999999999963
Q ss_pred HHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHH----------------Hh----------------------
Q 003452 313 MMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAV----------------LL---------------------- 354 (819)
Q Consensus 313 i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v----------------~~---------------------- 354 (819)
.|. -..++.+-.-++..+|.+++.+....++++++.... ++
T Consensus 305 vMN-ts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~ 383 (1051)
T KOG0210|consen 305 VMN-TSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQ 383 (1051)
T ss_pred Hhc-cCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhh
Confidence 233 335566667788899999999988888877765332 11
Q ss_pred ----------------------------ccCCCc----------eEE--------------------Ee------cch--
Q 003452 355 ----------------------------KKTDNT----------SHV--------------------HW------KGA-- 368 (819)
Q Consensus 355 ----------------------------~~~~~~----------~~~--------------------~~------KGa-- 368 (819)
.+++|+ +++ +. ||+
T Consensus 384 i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~ 463 (1051)
T KOG0210|consen 384 IEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALS 463 (1051)
T ss_pred cccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccch
Confidence 111111 000 00 000
Q ss_pred ------------HHHHHHhhhhc---ccccCCcc----------------------------------------------
Q 003452 369 ------------AEMILAMCSSY---YDASGNIK---------------------------------------------- 387 (819)
Q Consensus 369 ------------~e~il~~c~~~---~~~~g~~~---------------------------------------------- 387 (819)
.-..++.|.++ ++.+|+..
T Consensus 464 ~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~ 543 (1051)
T KOG0210|consen 464 RVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQ 543 (1051)
T ss_pred hhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEE
Confidence 00123344321 11122110
Q ss_pred --cCCHH--------------------------------HHHHHHHHHHHhhhCCceeeeeecccCCcccccchhh----
Q 003452 388 --YLDDN--------------------------------EKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKD---- 429 (819)
Q Consensus 388 --~l~~~--------------------------------~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~---- 429 (819)
|++.+ ...-+++.-.+||++|+|++.+|.|.+++++++..+.
T Consensus 544 vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~ 623 (1051)
T KOG0210|consen 544 VFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNA 623 (1051)
T ss_pred EeccccccceeeEEEecCCCceEEEEEecchHHHhcccccchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHh
Confidence 11100 0123455667899999999999999998766431110
Q ss_pred ---------------hhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC
Q 003452 430 ---------------QKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD 494 (819)
Q Consensus 430 ---------------~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~ 494 (819)
-+...|.|+.++|+.|.||.++++++.+++.||+|||++||+|||..+||..||+..++...+++
T Consensus 624 A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ 703 (1051)
T KOG0210|consen 624 AKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQY 703 (1051)
T ss_pred hhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCce
Confidence 02357899999999999999999999999999999999999999999999999999999887553
Q ss_pred -----------------------CCccceecccccc---cCCHHHHHHHhhhh--ceeccCCHhhHHHHHHHHHhC-CCE
Q 003452 495 -----------------------TSTGAVLEGEEFR---NYTHEERMEKVDKI--CVMARSSPFDKLLMVQCLKQK-GHV 545 (819)
Q Consensus 495 -----------------------~~~~~vi~g~~~~---~~~~~~~~~~~~~~--~v~ar~sP~~K~~iV~~L~~~-g~~ 545 (819)
.+.+++++|+.+. ++.++|+.+....+ .|+|||+|+||+++++.+|++ |..
T Consensus 704 ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~kr 783 (1051)
T KOG0210|consen 704 IHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKR 783 (1051)
T ss_pred EEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCce
Confidence 2567899998875 55678888877665 489999999999999999987 999
Q ss_pred EEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 546 VAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRW-GRCVHTNIQKLIQFQLTANVAALLIN 624 (819)
Q Consensus 546 Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~-gR~~~~ni~k~i~f~l~~nv~~i~~~ 624 (819)
||++|||-||+.|+++||+||++-++...+|.-|||+.+. .|+.+.+++.| ||..|++..+.-+|.+-..++...++
T Consensus 784 vc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSIt--qF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Q 861 (1051)
T KOG0210|consen 784 VCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSIT--QFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQ 861 (1051)
T ss_pred EEEEcCCCccchheeecccceeeecccccccchhccccHH--HHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHH
Confidence 9999999999999999999999887888899999999998 89999999999 99999999999999999988888888
Q ss_pred HHHHHhcCCCchhHHH---HHHHHhhhhhHhHhhhcccCC--cccccCCCCCC---CCCCcchHHHHHHHHHHHHHHHHH
Q 003452 625 FVAAVYAGEIPLTAVQ---LLWVNLIMDTLGALALATEKP--TKELMDKPPVG---RTEPLITNIMWRNLVAQALYQRAV 696 (819)
Q Consensus 625 ~~~~~~~~~~pl~~~q---ll~vnli~d~l~alal~~e~p--~~~lm~~~P~~---r~~~li~~~~~~~i~~~~~~~~~v 696 (819)
.+++..+.+.|..-.| |.-+..+++.+|.+++..+.- .+..+..|..+ .++..++.+.+..|...++||..+
T Consensus 862 avfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~v 941 (1051)
T KOG0210|consen 862 AVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSV 941 (1051)
T ss_pred HHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccH
Confidence 8887777777776665 445667789999999886642 22223333222 244566777777778889999988
Q ss_pred HHHHHHhhccccCCcchhhhHHHHHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHHHHHHHhHcccc
Q 003452 697 LLTLQFRGESIFGVNKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFADT 776 (819)
Q Consensus 697 ~~~l~~~~~~~~~~~~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~v~~~~~~f~~ 776 (819)
+++..+. +|..+.....++.|.++++..+......- -..+|+.+.+-++++++.++.+.+++.+|..
T Consensus 942 im~g~~~---l~~~ef~~ivaisFtaLi~tELiMVaLtv----------~tw~~~m~vae~lsL~~Yivsl~~l~~yfd~ 1008 (1051)
T KOG0210|consen 942 IMYGALL---LFDTEFIHIVAISFTALILTELIMVALTV----------RTWHWLMVVAELLSLALYIVSLAFLHEYFDR 1008 (1051)
T ss_pred HHHHHHH---HhhhhheEeeeeeeHHHHHHHHHHHhhhh----------hhhhHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 7664321 22222333456677777766654322111 1235666667777888888888899888876
Q ss_pred cc-CChhhHHHHHHHHHHHHHHHHHHhhccCCCCcccchhc
Q 003452 777 ER-LNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLK 816 (819)
Q Consensus 777 ~~-l~~~~w~~~~~~~~~~~~~~~~~k~i~~~~~~~~~~~~ 816 (819)
.- ++|.+..-..++.+++++.-++.|.+....+| +.|-|
T Consensus 1009 ~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sP-pSYaK 1048 (1051)
T KOG0210|consen 1009 YFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSP-PSYAK 1048 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-cchhh
Confidence 43 34444334455566677777888888876666 45544
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-54 Score=503.12 Aligned_cols=388 Identities=34% Similarity=0.526 Sum_probs=315.9
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHhcc-cCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecc
Q 003452 189 AVFLVIAVSAGSNFTQNRQFDKFSKV-SNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDES 267 (819)
Q Consensus 189 ~v~l~~~v~~~~~~~~~~~~~~l~~~-~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES 267 (819)
++++..+++...+++.++..+++.+. .++.+++|+|+| +++|++++|+|||+|.+++||+|||||++++|++ .||||
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vdes 82 (499)
T TIGR01494 5 LVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVDES 82 (499)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEEcc
Confidence 34556677888888999999998872 345689999999 9999999999999999999999999999999976 99999
Q ss_pred cccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHH-hhHhHHHHHHH
Q 003452 268 SMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLT-SSTGKIGLAVA 346 (819)
Q Consensus 268 ~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a-~~~~~~~l~~a 346 (819)
+|||||.|+.|.+ ++.+++||.+.+|+++++|+++|.+|..+++...+.++...++|+|+++++++ .++.++.++++
T Consensus 83 ~LTGEs~pv~k~~--g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 83 NLTGESVPVLKTA--GDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccCCCCCeeecc--CCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999994 78899999999999999999999999999999999888887999999999999 78888777777
Q ss_pred HHHHHHH---------h---------------------------------------------------------ccCCCc
Q 003452 347 FLVLAVL---------L---------------------------------------------------------KKTDNT 360 (819)
Q Consensus 347 ~l~~~v~---------~---------------------------------------------------------~~~~~~ 360 (819)
++++++| + .+++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 6665432 1 344442
Q ss_pred e--------EEEe------cchHH--HHHHhhhh----c--ccc------------cCCcccCCHHHH-H---HHHHHHH
Q 003452 361 S--------HVHW------KGAAE--MILAMCSS----Y--YDA------------SGNIKYLDDNEK-E---RFQQIIQ 402 (819)
Q Consensus 361 ~--------~~~~------KGa~e--~il~~c~~----~--~~~------------~g~~~~l~~~~~-~---~~~~~i~ 402 (819)
. .++. -++|. .+++.+.. . ++. ++....-+++.. + .+.+.++
T Consensus 241 LT~~~~~v~~~~~~~~~~~s~hp~~~ai~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~G~~~~i~~~~~~~~~~~~ 320 (499)
T TIGR01494 241 LTKNEMSFKKVSVLGGEYLSGHPDERALVKSAKWKILNVFEFSSVRKRMSVIVRGPDGTYVKGAPEFVLSRVKDLEEKVK 320 (499)
T ss_pred cccCceEEEEEEecCCCcCCCChHHHHHHHHhhhcCcceeccCCCCceEEEEEecCCcEEEeCCHHHHHHhhHHHHHHHH
Confidence 1 0110 11221 11111110 0 000 000000000000 0 1233445
Q ss_pred HhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHH
Q 003452 403 GMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAI 482 (819)
Q Consensus 403 ~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~i 482 (819)
.++.+|+|++++|++. +++|+++++|++|++++++|+.|+++|++++|+|||+..+|..+
T Consensus 321 ~~~~~g~~~~~~a~~~--------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~i 380 (499)
T TIGR01494 321 ELAQSGLRVLAVASKE--------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAI 380 (499)
T ss_pred HHHhCCCEEEEEEECC--------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHH
Confidence 6778999999888643 68999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhC
Q 003452 483 ATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKET 562 (819)
Q Consensus 483 A~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~A 562 (819)
|+++|| +++++|+||.++|+.+|+.|+.|+|+|||.||+|||++|
T Consensus 381 a~~lgi-----------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~A 425 (499)
T TIGR01494 381 AKELGI-----------------------------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKA 425 (499)
T ss_pred HHHcCc-----------------------------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhC
Confidence 999986 578999999999999999999999999999999999999
Q ss_pred CcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHH
Q 003452 563 DIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLL 642 (819)
Q Consensus 563 dvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll 642 (819)
||||+|| |+++||++++++++..++.++++||++++++++++.|.+++|++.+++++++.+
T Consensus 426 dvgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~------------- 486 (499)
T TIGR01494 426 DVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV------------- 486 (499)
T ss_pred CCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------
Confidence 9999997 799999999999999999999999999999999999999999998888776442
Q ss_pred HHHhhhhhHhHhh
Q 003452 643 WVNLIMDTLGALA 655 (819)
Q Consensus 643 ~vnli~d~l~ala 655 (819)
+|+++++.++++
T Consensus 487 -~~~~~~~~~~~~ 498 (499)
T TIGR01494 487 -LNLVPPGLAALA 498 (499)
T ss_pred -HHHHhcchhhhc
Confidence 677777776653
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-56 Score=535.74 Aligned_cols=554 Identities=21% Similarity=0.314 Sum_probs=447.7
Q ss_pred HHHhcCCCccCCCCCc---hHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhh
Q 003452 126 RHEAFSSNTYKKPPSK---SLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNF 202 (819)
Q Consensus 126 r~~~~G~N~~~~~~~~---~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~ 202 (819)
++..|-.|.+...|-. -+.+++++||+..-++.+++.++++++- +.+. +++-+ ++.++++..++++.|.
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~----~~~~~---~~pl~~vl~~t~iKd~ 99 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPF----NPYTT---LVPLLFVLGITAIKDA 99 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cccc----Cccce---eeceeeeehHHHHHHH
Confidence 4557888988764322 3357889999999999999999998765 3322 23322 3444555666777777
Q ss_pred hHHHHHHHHhcccCCcceEEEeCCE-EEEEecCccccCCEEEEecCCeeccceEEEecc----ceeEecccccCCCceee
Q 003452 203 TQNRQFDKFSKVSNNIQIDVIRNGR-RQQISIFEIVVGDVICLKIGDQVPANGLFLDGH----SLQVDESSMTGESDHVE 277 (819)
Q Consensus 203 ~~~~~~~~l~~~~~~~~~~V~RdG~-~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~----~l~VDES~LTGES~pv~ 277 (819)
.++....+.++..++.++.|.|++. ..+..+++++|||+|.+..+|.+|||.++++++ .+.|+.+.|.||+....
T Consensus 100 ~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 100 IEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred HhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 7777777777777777899999644 799999999999999999999999999999654 25899999999998877
Q ss_pred ecCC---------------------------------------------CCCeEeeccccccc-eEEEEEEEeCCcChHH
Q 003452 278 VNSS---------------------------------------------QNPFLFSGTKVADG-YARMLATSVGMNTTWG 311 (819)
Q Consensus 278 k~~~---------------------------------------------~~~~l~sGt~v~~G-~~~~~V~~vG~~T~~g 311 (819)
|... ..+.++.|+++.+. .+.+.|+.+|.+|.++
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~ 259 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLM 259 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHH
Confidence 6521 12356777777764 5889999999999654
Q ss_pred HHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh-------------------------------------
Q 003452 312 QMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL------------------------------------- 354 (819)
Q Consensus 312 ~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~------------------------------------- 354 (819)
..-.....+++++++.+|.....+..+.+.++++..+...
T Consensus 260 ---~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~ 336 (1151)
T KOG0206|consen 260 ---QNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQ 336 (1151)
T ss_pred ---HhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhh
Confidence 4445578889999999999877776666555554433211
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 337 ~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg 416 (1151)
T KOG0206|consen 337 YLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYG 416 (1151)
T ss_pred ceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE 496 (1151)
T KOG0206|consen 417 RNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDE 496 (1151)
T ss_pred cCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcH
Confidence
Q ss_pred ----------------------------------------------------ccCCCceEEEecchHHHHHHhhhhcccc
Q 003452 355 ----------------------------------------------------KKTDNTSHVHWKGAAEMILAMCSSYYDA 382 (819)
Q Consensus 355 ----------------------------------------------------~~~~~~~~~~~KGa~e~il~~c~~~~~~ 382 (819)
+.++|++.++||||+.++.++++.
T Consensus 497 ~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~---- 572 (1151)
T KOG0206|consen 497 AALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK---- 572 (1151)
T ss_pred HHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh----
Confidence 567778899999999999999975
Q ss_pred cCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhhh------------------hhhcccCcEEEEEE
Q 003452 383 SGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQ------------------KKLIEDNLTLLGLV 444 (819)
Q Consensus 383 ~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~------------------~~~~e~~l~~lG~v 444 (819)
-....++...+++++||.+|+||||+|||+++++++..+... .+.+|+||+++|..
T Consensus 573 ------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGAT 646 (1151)
T KOG0206|consen 573 ------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGAT 646 (1151)
T ss_pred ------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcce
Confidence 124567777889999999999999999999998876543211 34579999999999
Q ss_pred EeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC------------------------------
Q 003452 445 GIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD------------------------------ 494 (819)
Q Consensus 445 ~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~------------------------------ 494 (819)
++||++++||+++|+.|++||||+||+|||..+||.+||..|++..++..
T Consensus 647 AIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~ 726 (1151)
T KOG0206|consen 647 AIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFT 726 (1151)
T ss_pred eeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999876321
Q ss_pred ------------CCccceecccccccCCHHH----HHHHhhh--hceeccCCHhhHHHHHHHHHhC-CCEEEEEcCCCCC
Q 003452 495 ------------TSTGAVLEGEEFRNYTHEE----RMEKVDK--ICVMARSSPFDKLLMVQCLKQK-GHVVAVTRDGTND 555 (819)
Q Consensus 495 ------------~~~~~vi~g~~~~~~~~~~----~~~~~~~--~~v~ar~sP~~K~~iV~~L~~~-g~~Va~~GDG~ND 555 (819)
...+++++|+.+....+++ +.+.... ..++||+||.||..+|+..++. +.+++++|||+||
T Consensus 727 ~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGAND 806 (1151)
T KOG0206|consen 727 EELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGAND 806 (1151)
T ss_pred HHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCcc
Confidence 1356888888876555443 3333333 3599999999999999999754 8999999999999
Q ss_pred HHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--
Q 003452 556 APALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRW-GRCVHTNIQKLIQFQLTANVAALLINFVAAVYAG-- 632 (819)
Q Consensus 556 ~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~-gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~-- 632 (819)
.+|+++|||||++++.+..+|..+||+.+. .|..+.+++.. ||+.|.|+.+++.|.+++|+...++.|++.++.+
T Consensus 807 VsMIQ~AhVGVGIsG~EGmQAvmsSD~AIa--qFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfS 884 (1151)
T KOG0206|consen 807 VSMIQEAHVGVGISGQEGMQAVMSSDFAIA--QFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFS 884 (1151)
T ss_pred chheeeCCcCeeeccchhhhhhhcccchHH--HHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Confidence 999999999999998999999999999998 89999999987 9999999999999999999999999999988875
Q ss_pred -CCchhHHHHHHHHhhhhhHhHhhhc---ccCCcccccCCCCCCC---CCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 633 -EIPLTAVQLLWVNLIMDTLGALALA---TEKPTKELMDKPPVGR---TEPLITNIMWRNLVAQALYQRAVLLTLQF 702 (819)
Q Consensus 633 -~~pl~~~qll~vnli~d~l~alal~---~e~p~~~lm~~~P~~r---~~~li~~~~~~~i~~~~~~~~~v~~~l~~ 702 (819)
...+..+++.++|++++.+|.++++ .+.+.+.+|+.|-.++ +..++++..++.++..++||.+++|++.+
T Consensus 885 gq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~ 961 (1151)
T KOG0206|consen 885 GQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPY 961 (1151)
T ss_pred CCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeH
Confidence 5677889999999999999999986 3456667777765443 44578888888899999999998876544
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-50 Score=428.86 Aligned_cols=402 Identities=26% Similarity=0.376 Sum_probs=296.1
Q ss_pred HHhhhHHHHHHHHHHHHHHHhh----ccc-CcccchhhHHHH--HHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEE
Q 003452 150 ALKDLTILILLGCAVLSLAFGI----KEH-GLKEGWYEGGSI--LVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDV 222 (819)
Q Consensus 150 ~~~~~~~~il~v~a~~s~~~g~----~~~-g~~~~~~~~~~i--~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V 222 (819)
..++|..++..+.++++.++.+ ... +....|+-.+++ ++.+++..+-+++.+-+-+-|.+.|++.+....+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 3456666666666666654333 211 212223222222 223334455677788888888888888776667888
Q ss_pred EeC-CEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCC-CCCeEeeccccccceEEEE
Q 003452 223 IRN-GRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSS-QNPFLFSGTKVADGYARML 300 (819)
Q Consensus 223 ~Rd-G~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~-~~~~l~sGt~v~~G~~~~~ 300 (819)
+++ |..+.|++.+|+.||+|.++.||+||+||.+++|.+ .||||.+||||-||-|.++ +.+-|-.||.|.+...+++
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 876 899999999999999999999999999999999998 9999999999999999863 1245999999999999999
Q ss_pred EEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHH----------------------HHHHHHHHHh----
Q 003452 301 ATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLA----------------------VAFLVLAVLL---- 354 (819)
Q Consensus 301 V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~----------------------~a~l~~~v~~---- 354 (819)
+|+...+|.+.|++.+++.++.+|||-+-.++-+-.-+..+-++ +|+++.++-.
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPTTIGg 267 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAVATLYPFAIYSGGGAASVTVLVALLVCLIPTTIGG 267 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHHHhhhhHHHHcCCCCcCHHHHHHHHHHHhcccHHH
Confidence 99999999999999999999999999998877654333222111 1111111000
Q ss_pred ------------------------------------ccCCCceE---------EEecchHH-HHHHhh--hhcccccC--
Q 003452 355 ------------------------------------KKTDNTSH---------VHWKGAAE-MILAMC--SSYYDASG-- 384 (819)
Q Consensus 355 ------------------------------------~~~~~~~~---------~~~KGa~e-~il~~c--~~~~~~~g-- 384 (819)
.+++|++. +-.+|..+ .+.+.| +.++|++-
T Consensus 268 LLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~~~~la~aa~lsSl~DeTpEG 347 (681)
T COG2216 268 LLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVSEEELADAAQLASLADETPEG 347 (681)
T ss_pred HHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCCCCHHHHHHHHHHhhhccCCCCc
Confidence 24455432 22344332 222222 12222111
Q ss_pred -----------------------CcccCCHHHHH--------------------------------HHHHHHHHhhhCCc
Q 003452 385 -----------------------NIKYLDDNEKE--------------------------------RFQQIIQGMASSSL 409 (819)
Q Consensus 385 -----------------------~~~~l~~~~~~--------------------------------~~~~~i~~~a~~gl 409 (819)
+..|++.+.|. .++...++.+..|-
T Consensus 348 rSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~~~~~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GG 427 (681)
T COG2216 348 RSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLPGGREIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGG 427 (681)
T ss_pred ccHHHHHHHhccCCCcccccccceeeecceecccccccCCCCceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCC
Confidence 12233322221 11111122222222
Q ss_pred eeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 003452 410 RCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGIL 489 (819)
Q Consensus 410 r~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~ 489 (819)
.++ .+..|..++|++.++|-+|||.+|-..+||+.||+.+|+||||+.||.+||+|.|++
T Consensus 428 TPL--------------------~V~~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD 487 (681)
T COG2216 428 TPL--------------------VVVENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD 487 (681)
T ss_pred Cce--------------------EEEECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch
Confidence 222 234577899999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeC
Q 003452 490 KPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMG 569 (819)
Q Consensus 490 ~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg 569 (819)
+ ..|.++||||.++++.-|.+|+.|||||||+||+|||.+||||+||.
T Consensus 488 d--------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN 535 (681)
T COG2216 488 D--------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN 535 (681)
T ss_pred h--------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc
Confidence 7 58999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHH
Q 003452 570 IQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTN 605 (819)
Q Consensus 570 ~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~n 605 (819)
+||..|||++.+|=+|.|...+.++++.|++..-.
T Consensus 536 -sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiT 570 (681)
T COG2216 536 -SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLIT 570 (681)
T ss_pred -cccHHHHHhhcccccCCCccceehHhhhhhhheee
Confidence 99999999999999999999999999999987643
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-27 Score=245.52 Aligned_cols=169 Identities=33% Similarity=0.573 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEe-ccceeE
Q 003452 186 ILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLD-GHSLQV 264 (819)
Q Consensus 186 i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~-g~~l~V 264 (819)
+++++++..+++.+.+++.++..+++++..++..++|+|||++++++++||+|||+|.+++||++||||++++ |.. .|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~-~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSA-YV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEE-EE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecccc-cc
Confidence 4555666777888899999999999988766645999999999999999999999999999999999999999 765 99
Q ss_pred ecccccCCCceeeec---CCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHH
Q 003452 265 DESSMTGESDHVEVN---SSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKI 341 (819)
Q Consensus 265 DES~LTGES~pv~k~---~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~ 341 (819)
|||.+|||+.|+.|. ...++++|+||.+.+|.+.++|++||.+|..|++.+.+.+.+.+++++++.+++++.++.++
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999998 22489999999999999999999999999999999999888888899999999999999999
Q ss_pred HHHHHHHHHHHHhc
Q 003452 342 GLAVAFLVLAVLLK 355 (819)
Q Consensus 342 ~l~~a~l~~~v~~~ 355 (819)
.++++++++++++.
T Consensus 161 ~~~~~~~~~~~~~~ 174 (230)
T PF00122_consen 161 ILAIAILVFIIWFF 174 (230)
T ss_dssp HHHHHHHHHHHCHT
T ss_pred ccccchhhhcccee
Confidence 99999988877654
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=218.70 Aligned_cols=171 Identities=37% Similarity=0.608 Sum_probs=144.0
Q ss_pred CCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCcc
Q 003452 633 EIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNK 712 (819)
Q Consensus 633 ~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~~~~~~~~ 712 (819)
|.|+++.|+||+|+++|++|+++++.|||++++|+|||++++++++++.+|+.++.+++++.++.+..++.+...++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999998887776666566544
Q ss_pred h-------hhhHHHHHHHHHHHHHHHHhhhcccccccc--ccccchHHHHHHHHHHHHHHHHHHHH--HhHccccccCCh
Q 003452 713 K-------VKETLIFNTFVLCQVFNEFNARKLEKKNVF--EGIHKNRLFLGIIGTTIVLQVVMVEF--LKNFADTERLNW 781 (819)
Q Consensus 713 ~-------~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~--~~~~~n~~~~~~i~~~~~~~~~~v~~--~~~~f~~~~l~~ 781 (819)
. ..+|+.|++++++|++|.+++|+.+ .+.+ +++++|+++++++++++++|+++++. ++.+|++.++++
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~-~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~ 159 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRR-RSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPL 159 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSS-STCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----TH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhccccccc-ccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCH
Confidence 3 4899999999999999999999954 3444 58889999999999999999888764 899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhc
Q 003452 782 GQWSACIGFAAASWPIGWLVKCI 804 (819)
Q Consensus 782 ~~w~~~~~~~~~~~~~~~~~k~i 804 (819)
.+|+++++++++.+++.++.|++
T Consensus 160 ~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 160 WQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999975
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-21 Score=213.49 Aligned_cols=300 Identities=16% Similarity=0.269 Sum_probs=216.1
Q ss_pred chHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcc----------------cc------
Q 003452 367 GAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEE----------------EH------ 424 (819)
Q Consensus 367 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~----------------~~------ 424 (819)
|-.+...+.|+.+|| ...+.|++...+.++++.+....-.| +|+|+|||+..-. +.
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 445667899999997 45678999999999988877766666 5999999875210 00
Q ss_pred -------cchhhh-------------------hhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHH
Q 003452 425 -------RNEKDQ-------------------KKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFT 478 (819)
Q Consensus 425 -------~~~~~~-------------------~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~t 478 (819)
++.... ....-.+..|.|++....+.|++....|+.|.++-|+.+.+|-.++..
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 000000 001124678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCC---------CC------------------------------Cccceecc-------cccccCCH-
Q 003452 479 AKAIATECGILKPGQ---------DT------------------------------STGAVLEG-------EEFRNYTH- 511 (819)
Q Consensus 479 a~~iA~~~GI~~~~~---------~~------------------------------~~~~vi~g-------~~~~~~~~- 511 (819)
.+-.|+++||...=. +. .+...++. ..|+.++.
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 999999999985310 00 00011100 01111111
Q ss_pred -----------------HHHHHHhhh-------hceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCC--CHHHhhhCCcc
Q 003452 512 -----------------EERMEKVDK-------ICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTN--DAPALKETDIG 565 (819)
Q Consensus 512 -----------------~~~~~~~~~-------~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~N--D~~aL~~AdvG 565 (819)
.+++..+.+ +..|..++|+.-.++++.+|++|++++++|...| ..-.+-+|||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadIS 1015 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADIS 1015 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcccee
Confidence 111111111 2378999999999999999999999999999988 45566889999
Q ss_pred eeeCCC------------ChH--HH----------------HhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003452 566 LSMGIQ------------GTE--VA----------------KESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLT 615 (819)
Q Consensus 566 Iamg~~------------gt~--~a----------------k~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~ 615 (819)
|++..- ++. .| .-++|+.+.....-++.++|..+|.....+|+.+.|.+.
T Consensus 1016 ialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq 1095 (1354)
T KOG4383|consen 1016 IALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQ 1095 (1354)
T ss_pred EEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 997510 111 11 112344444445566889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhh-hcccCCcccccCC
Q 003452 616 ANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALA-LATEKPTKELMDK 668 (819)
Q Consensus 616 ~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~ala-l~~e~p~~~lm~~ 668 (819)
..+...++.|++.++..+..++..|++|...+...+..+. |-+.+|.+.+|-+
T Consensus 1096 ~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~m 1149 (1354)
T KOG4383|consen 1096 AQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIM 1149 (1354)
T ss_pred HHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEe
Confidence 9999999999999999999999999999999877766665 5556666666544
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-17 Score=171.04 Aligned_cols=97 Identities=46% Similarity=0.717 Sum_probs=91.7
Q ss_pred CcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHH
Q 003452 437 NLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERME 516 (819)
Q Consensus 437 ~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~ 516 (819)
+..++|.+.+.|++||+++++|++|+++|++++|+|||+..+|.++|+++||...
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~------------------------- 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS------------------------- 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE-------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc-------------------------
Confidence 7899999999999999999999999999999999999999999999999999542
Q ss_pred HhhhhceeccC--CHhhH--HHHHHHHHhCCCEEEEEcCCCCCHHHhhhCC
Q 003452 517 KVDKICVMARS--SPFDK--LLMVQCLKQKGHVVAVTRDGTNDAPALKETD 563 (819)
Q Consensus 517 ~~~~~~v~ar~--sP~~K--~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Ad 563 (819)
.+++++ +|++| .++++.|+.+++.|+|+|||.||++|+++||
T Consensus 170 -----~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 -----IVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -----EEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -----cccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 289999 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.9e-14 Score=130.17 Aligned_cols=126 Identities=23% Similarity=0.267 Sum_probs=108.9
Q ss_pred cEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHH
Q 003452 438 LTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEK 517 (819)
Q Consensus 438 l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~ 517 (819)
+...+.++---.+=++++++|++|++. ++|.+.|||..-+....|+-.||+...
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r------------------------- 72 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER------------------------- 72 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee-------------------------
Confidence 345667777778889999999999999 999999999999999999999987642
Q ss_pred hhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCC--CChHHHHhhcCEEEeCCChhHHHHH
Q 003452 518 VDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGI--QGTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 518 ~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~--~gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
||+...|+.|..+++.|++.++.|.|+|||.||.+||++||+||..-. ...+-+.++||+++- +...+.++
T Consensus 73 -----v~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl 145 (152)
T COG4087 73 -----VFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDL 145 (152)
T ss_pred -----eecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHH
Confidence 899999999999999999999999999999999999999999987542 244567799999987 55555555
Q ss_pred H
Q 003452 596 L 596 (819)
Q Consensus 596 i 596 (819)
+
T Consensus 146 ~ 146 (152)
T COG4087 146 L 146 (152)
T ss_pred h
Confidence 4
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.27 E-value=8e-12 Score=104.85 Aligned_cols=66 Identities=26% Similarity=0.435 Sum_probs=63.2
Q ss_pred cCHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHH
Q 003452 99 GGIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLS 166 (819)
Q Consensus 99 ggv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s 166 (819)
.+++++++.|+|+..+||++++ +.+|+++||+|.+++++++++|+.++++|+||++++|++++++|
T Consensus 4 ~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 4 LSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp SSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 4789999999999999999977 99999999999999999999999999999999999999999987
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.7e-11 Score=98.62 Aligned_cols=62 Identities=31% Similarity=0.492 Sum_probs=58.0
Q ss_pred HhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q 003452 107 ALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFG 170 (819)
Q Consensus 107 ~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g 170 (819)
.|+++.+.||++++ +++|+++||+|++++++.+++|+.++++|+||++++|++++++|+++|
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 47888889999877 999999999999999988999999999999999999999999998875
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.3e-09 Score=112.63 Aligned_cols=146 Identities=22% Similarity=0.282 Sum_probs=101.9
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccc-c--cc-----C-----------
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEE-F--RN-----Y----------- 509 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~-~--~~-----~----------- 509 (819)
.+.+++.++|++|++.|+++.++||++...+..+++++++..+....+++.+....+ . .. +
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 478899999999999999999999999999999999999875422222222222110 0 00 0
Q ss_pred -------------------CHHHHHHHhhhh--cee-----cc--CCHhhHHHHHHHHHhC-C---CEEEEEcCCCCCHH
Q 003452 510 -------------------THEERMEKVDKI--CVM-----AR--SSPFDKLLMVQCLKQK-G---HVVAVTRDGTNDAP 557 (819)
Q Consensus 510 -------------------~~~~~~~~~~~~--~v~-----ar--~sP~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~ 557 (819)
..+++.+.+.+. .+. .. ....+|...++.+.+. | +.++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 001111111111 111 01 1234788888877654 2 45899999999999
Q ss_pred HhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHH
Q 003452 558 ALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 558 aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
|++.|++|++|+ ++.+.+|+.||++..+++-.++.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999987777776654
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.6e-09 Score=109.28 Aligned_cols=130 Identities=12% Similarity=0.018 Sum_probs=96.5
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecc-cccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEG-EEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g-~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+...-. ..+.+++ ..+.. . .. .
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~a---n~l~~~~~g~~tG---~----------~~--~ 128 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLC---HKLEIDDSDRVVG---Y----------QL--R 128 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhc---eeeEEecCCeeEC---e----------ee--c
Confidence 68999999999999975 999999999999999999999974211 1111211 11000 0 01 3
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWG 599 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~g 599 (819)
.|+.|...++.+++.|..+.++|||.||.+|++.||+|+++. +.+..+++||=.-.-.+.+.+..++.++
T Consensus 129 ~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 129 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred CcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 477899999999988878999999999999999999999997 5555556665433334677777777664
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.6e-09 Score=110.46 Aligned_cols=148 Identities=20% Similarity=0.199 Sum_probs=103.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceec---cccccc-----------------
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLE---GEEFRN----------------- 508 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~---g~~~~~----------------- 508 (819)
.+.|.+.++|+++++.|+++.+.||++...+..+++++|+..+....+++.+.. ++.+..
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 377899999999999999999999999999999999999864322222232221 111100
Q ss_pred ------------------------CCHHHHHHHhhhh----ce-----eccCCHh--hHHHHHHHHHhC----CCEEEEE
Q 003452 509 ------------------------YTHEERMEKVDKI----CV-----MARSSPF--DKLLMVQCLKQK----GHVVAVT 549 (819)
Q Consensus 509 ------------------------~~~~~~~~~~~~~----~v-----~ar~sP~--~K~~iV~~L~~~----g~~Va~~ 549 (819)
...++..+.+.+. .+ +....|. +|..-++.+.++ .+.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 0001112222111 11 0112222 477777777554 2468999
Q ss_pred cCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 550 RDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 550 GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
||+.||.+|++.|++|+||+ ++.+.+|+.||+|..+++-.++.++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999 999999999999998888888888775
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=5e-09 Score=112.26 Aligned_cols=66 Identities=24% Similarity=0.306 Sum_probs=56.8
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
+|..-++.|.+. | +.|+++|||.||.+||+.|++|+||+ ++.+.+|+.||+|..+++-.++.++++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 566666666554 2 56889999999999999999999999 999999999999999888888888775
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=8.5e-09 Score=110.23 Aligned_cols=66 Identities=27% Similarity=0.273 Sum_probs=55.4
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcC--EEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSD--IVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaD--ivl~dd~f~~i~~~i~ 597 (819)
+|..-++.+.+. | +.|+++|||.||.+||+.|+.|+||+ ++.+.+|+.|| .|..+++-.++.++++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 466666666544 2 56889999999999999999999999 99999999988 6777888888888775
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=6.1e-09 Score=113.70 Aligned_cols=131 Identities=19% Similarity=0.283 Sum_probs=98.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceec-cC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA-RS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a-r~ 527 (819)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+..... +.-.+.+|.--.. +.. -+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~a--n~lei~dg~ltg~--------------v~g~iv 244 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVA--NELEIMDGKLTGN--------------VLGDIV 244 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEE--eEEEEECCEEEeE--------------ecCccC
Confidence 689999999999999999999999999888999999999854110 0000111110000 010 02
Q ss_pred CHhhHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 528 sP~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
..+.|.+.++.+.++ | +.+.++|||.||.+|++.|++|+|| ++.+..++.||.++...++.++..++-
T Consensus 245 ~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 245 DAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 335788888887654 3 5788899999999999999999999 578899999999999889988876653
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=7.3e-09 Score=111.18 Aligned_cols=148 Identities=16% Similarity=0.150 Sum_probs=100.9
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceec--ccccc--cC---------------
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLE--GEEFR--NY--------------- 509 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~--g~~~~--~~--------------- 509 (819)
.+.+.+.++|+++++.|+++.+.||++...+..+.+++|+.......+++.+.+ |+.+. .+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 588899999999999999999999999999999999999864311111111110 10000 00
Q ss_pred ----------------------------------------------------CHH---HHHHHhhh-----hcee-----
Q 003452 510 ----------------------------------------------------THE---ERMEKVDK-----ICVM----- 524 (819)
Q Consensus 510 ----------------------------------------------------~~~---~~~~~~~~-----~~v~----- 524 (819)
.++ ++.+.+.+ ..+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 000 01111110 1110
Q ss_pred -ccCCHh--hHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCE--EEeCCChhHHHHH
Q 003452 525 -ARSSPF--DKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDI--VILDDNFASVARV 595 (819)
Q Consensus 525 -ar~sP~--~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDi--vl~dd~f~~i~~~ 595 (819)
...+|. .|..-++.|.+. | +.|+++|||.||.+||+.|+.|+||| ++.+.+|++||. +..+++-.++.++
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHH
Confidence 112222 577777777655 3 56889999999999999999999999 999999999996 6667788888877
Q ss_pred HH
Q 003452 596 LR 597 (819)
Q Consensus 596 i~ 597 (819)
++
T Consensus 258 l~ 259 (272)
T PRK15126 258 LT 259 (272)
T ss_pred HH
Confidence 75
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=8.3e-09 Score=110.22 Aligned_cols=148 Identities=28% Similarity=0.340 Sum_probs=105.8
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccc-c----------------------
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEE-F---------------------- 506 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~-~---------------------- 506 (819)
+.+.+.++|+++++.|+++.++||++...+..+.+++|+..+-...+++.+....+ +
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 88999999999999999999999999999999999999986311111111110000 0
Q ss_pred -------------------------------------c----------cCCH---HHHHHHhhh-----hceeccCCH--
Q 003452 507 -------------------------------------R----------NYTH---EERMEKVDK-----ICVMARSSP-- 529 (819)
Q Consensus 507 -------------------------------------~----------~~~~---~~~~~~~~~-----~~v~ar~sP-- 529 (819)
. .... ++..+.+.+ ...+.+..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0 0000 111111111 112222222
Q ss_pred -------hhHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 530 -------FDKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 530 -------~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
.+|..-++.|.++ | +.|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++...++-.+|.++++.
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 3788888888774 4 34889999999999999999999999 8999999999988899999999988875
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.2e-08 Score=105.98 Aligned_cols=148 Identities=21% Similarity=0.287 Sum_probs=101.2
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccc----ccc-CC-------------
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEE----FRN-YT------------- 510 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~----~~~-~~------------- 510 (819)
.+.+.+.++++++++.|+.+.+.||++...+..+++++|+..+....++..+..... +.. +.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999654321112222211110 000 00
Q ss_pred -----------------------HHHHHHHhhhhc----ee-----ccCCH--hhHHHHHHHHHhC-C---CEEEEEcCC
Q 003452 511 -----------------------HEERMEKVDKIC----VM-----ARSSP--FDKLLMVQCLKQK-G---HVVAVTRDG 552 (819)
Q Consensus 511 -----------------------~~~~~~~~~~~~----v~-----ar~sP--~~K~~iV~~L~~~-g---~~Va~~GDG 552 (819)
.+...+...+.. +. ....| .+|...++.+.++ | +.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 011111111111 11 11122 3788888877654 3 568999999
Q ss_pred CCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhH----HHHHHH
Q 003452 553 TNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFAS----VARVLR 597 (819)
Q Consensus 553 ~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~----i~~~i~ 597 (819)
.||.+|++.|++|+||+ ++.+..|+.||.|..+++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 999999999999988777777 665554
|
catalyze the same reaction as SPP. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.2e-08 Score=105.84 Aligned_cols=129 Identities=18% Similarity=0.269 Sum_probs=94.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc-C
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR-S 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar-~ 527 (819)
+++|++.+.++.|++.|+++.++||.+...+..+.+.+|+..-.. .....++..+... +.+. .
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~---~~~~~~~~~~~~~-------------~~~~~~ 148 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFA---NRLEVEDGKLTGL-------------VEGPIV 148 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEe---eEEEEECCEEEEE-------------ecCccc
Confidence 689999999999999999999999999999999999999864210 0000001000000 0111 1
Q ss_pred CHhhHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHH
Q 003452 528 SPFDKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 528 sP~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
.+..|..+++.+.++ | +.+.++||+.||.+|++.|+++++++ +.+..+++||.++.++++..+..+
T Consensus 149 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 149 DASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred CCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 123466666665444 2 35888999999999999999999986 568889999999999999888654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.7e-08 Score=105.47 Aligned_cols=66 Identities=26% Similarity=0.365 Sum_probs=55.7
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
+|...++.+.++ | +.++++||+.||.+|++.|++|++|| ++.+..|+.||++..+++-.++.++++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466666655443 3 46889999999999999999999999 888999999999999888889988875
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.1e-08 Score=107.24 Aligned_cols=147 Identities=20% Similarity=0.238 Sum_probs=101.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccce-e-cccccc--cCC--------------
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAV-L-EGEEFR--NYT-------------- 510 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~v-i-~g~~~~--~~~-------------- 510 (819)
.+.|++.+++++++++|+++.+.||++...+..+.+++++..+....+++.+ . +|+.+. .++
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 94 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKEH 94 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHHT
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhhc
Confidence 4668999999999999999999999999999999999998743211112222 0 011000 000
Q ss_pred -------------------------------------------------------HH-------HHHHHhhhhceecc--
Q 003452 511 -------------------------------------------------------HE-------ERMEKVDKICVMAR-- 526 (819)
Q Consensus 511 -------------------------------------------------------~~-------~~~~~~~~~~v~ar-- 526 (819)
.+ ++.+..+....+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 174 (254)
T PF08282_consen 95 NISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRSS 174 (254)
T ss_dssp TCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred ccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEec
Confidence 01 11111111111111
Q ss_pred -----CCH--hhHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHH
Q 003452 527 -----SSP--FDKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 527 -----~sP--~~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
.+| .+|...++.|.+. .+.++++||+.||.+||+.|+.|+||+ ++++..|..||.+..+.+=.+|.++
T Consensus 175 ~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 175 PYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp TTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred ccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHHh
Confidence 222 4788888888753 357888999999999999999999999 9999999999999998766888776
Q ss_pred H
Q 003452 596 L 596 (819)
Q Consensus 596 i 596 (819)
+
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.76 E-value=3e-08 Score=98.13 Aligned_cols=100 Identities=17% Similarity=0.180 Sum_probs=81.8
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceec--cCCHhhHH
Q 003452 456 KAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA--RSSPFDKL 533 (819)
Q Consensus 456 ~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a--r~sP~~K~ 533 (819)
.+|+.|+++|+++.++|+.+...+..+.+.+|+... |. .-.|+.-.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~--------------------------------f~~~kpkp~~~~ 88 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF--------------------------------HEGIKKKTEPYA 88 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE--------------------------------EecCCCCHHHHH
Confidence 589999999999999999999999999999999741 11 12344444
Q ss_pred HHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCC
Q 003452 534 LMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588 (819)
Q Consensus 534 ~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~ 588 (819)
.+++.+.-..+.++++||+.||.+|++.|+++++|+ ++.+..|+.|++|...++
T Consensus 89 ~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 89 QMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCC
Confidence 444544433467999999999999999999999999 899999999999987544
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.74 E-value=7.9e-08 Score=112.27 Aligned_cols=65 Identities=25% Similarity=0.371 Sum_probs=54.3
Q ss_pred HHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 532 KLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 532 K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
|..-++.|.+. | +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.||+|..+++-.+|.++++
T Consensus 508 KG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 508 KGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 44444444433 2 45888899999999999999999999 999999999999998888899988876
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.1e-08 Score=94.39 Aligned_cols=97 Identities=15% Similarity=0.203 Sum_probs=78.6
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHH
Q 003452 457 AVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMV 536 (819)
Q Consensus 457 aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV 536 (819)
+|++|++.|+++.++||++...+..+.+++|+... +... ..|...+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------~~~~--~~k~~~~ 81 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------YQGQ--SNKLIAF 81 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE--------------------------------Eecc--cchHHHH
Confidence 99999999999999999999999999999998641 1111 2344444
Q ss_pred HHHHh----CCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCC
Q 003452 537 QCLKQ----KGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588 (819)
Q Consensus 537 ~~L~~----~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~ 588 (819)
+.+.+ ..+.+.|+||+.||.+|++.|+++++|. ++.+..+..||+++..+.
T Consensus 82 ~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 82 SDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCC
Confidence 44432 3467999999999999999999999999 788889999999997554
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.8e-07 Score=98.08 Aligned_cols=147 Identities=18% Similarity=0.103 Sum_probs=97.0
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccc--------c--ccCCHHHHHHHh-
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEE--------F--RNYTHEERMEKV- 518 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~--------~--~~~~~~~~~~~~- 518 (819)
..+.+.++|++|+++|+++.++||+....+..+.+++|+..+....+++.+..... + ..+..+...+.+
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 34568999999999999999999999999999999999864333333444433211 0 011111110000
Q ss_pred ----------------------------------------------------------hh--hceec-----cCC--Hhh
Q 003452 519 ----------------------------------------------------------DK--ICVMA-----RSS--PFD 531 (819)
Q Consensus 519 ----------------------------------------------------------~~--~~v~a-----r~s--P~~ 531 (819)
.+ +.+.. ... -..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 00 00000 001 124
Q ss_pred HHHHHHHHHhC------CCEEEEEcCCCCCHHHhhhCCcceeeCCCCh---HHHHhh--c-CEEEeCCChhHHHHHHH
Q 003452 532 KLLMVQCLKQK------GHVVAVTRDGTNDAPALKETDIGLSMGIQGT---EVAKES--S-DIVILDDNFASVARVLR 597 (819)
Q Consensus 532 K~~iV~~L~~~------g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt---~~ak~a--a-Divl~dd~f~~i~~~i~ 597 (819)
|...++.+.+. .+.+.++||+.||.+||+.|+.|+||+ ++. +..|+. | ++|..+++-.++.++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 55555555433 456899999999999999999999999 776 468886 4 58888888888888775
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.2e-07 Score=100.69 Aligned_cols=64 Identities=30% Similarity=0.285 Sum_probs=55.2
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHH
Q 003452 531 DKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 531 ~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
+|..-++.+.+. .+.++++||+.||.+|++.|+.|++|+ ++.+..|+.||++..+++-.+|.++
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 588888777664 256899999999999999999999999 8999999999999988877777654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.6e-07 Score=96.65 Aligned_cols=116 Identities=22% Similarity=0.302 Sum_probs=86.5
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCC---CccceecccccccCCHHHHHHHhhhhcee
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDT---STGAVLEGEEFRNYTHEERMEKVDKICVM 524 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~---~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 524 (819)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+....... .++ +++|. +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-~ltG~------------------v~ 136 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-KLTGR------------------VV 136 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC-EEece------------------ee
Confidence 789999999999999999999999999999999999999998642110 011 23333 22
Q ss_pred c-cCCHhhHHHHHHHHHhC-CC---EEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEE
Q 003452 525 A-RSSPFDKLLMVQCLKQK-GH---VVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVI 584 (819)
Q Consensus 525 a-r~sP~~K~~iV~~L~~~-g~---~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl 584 (819)
. .+..+.|...++.+.+. |. .+.++|||.||.|||+.|+.+++.. +....+..|+...
T Consensus 137 g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~ 199 (212)
T COG0560 137 GPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRI 199 (212)
T ss_pred eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhc
Confidence 2 33457888888666553 43 4778899999999999999999997 3333444444433
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.2e-07 Score=93.73 Aligned_cols=111 Identities=17% Similarity=0.185 Sum_probs=85.2
Q ss_pred HHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHH
Q 003452 455 KKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLL 534 (819)
Q Consensus 455 ~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 534 (819)
..+++.|++.|+++.++||.+...+..+++++|+... |.. .++|..
T Consensus 54 ~~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~--------------------------------f~g--~~~k~~ 99 (183)
T PRK09484 54 GYGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL--------------------------------YQG--QSNKLI 99 (183)
T ss_pred hHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee--------------------------------ecC--CCcHHH
Confidence 3699999999999999999999999999999998641 221 134555
Q ss_pred HHHHHHh-C---CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCC----ChhHHHHHHHHHH
Q 003452 535 MVQCLKQ-K---GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDD----NFASVARVLRWGR 600 (819)
Q Consensus 535 iV~~L~~-~---g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd----~f~~i~~~i~~gR 600 (819)
.++.+.+ . .+.++|+||+.||.+|++.|+++++++ ++.+..+..||+++..+ .+..+.+.+...|
T Consensus 100 ~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 100 AFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred HHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 5544433 3 356999999999999999999999998 78888899999999643 2455555554433
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.53 E-value=7.7e-07 Score=95.50 Aligned_cols=147 Identities=13% Similarity=0.048 Sum_probs=94.4
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC-CCCCCCccceecccc--------c-c-cCCHHHHHHHh
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILK-PGQDTSTGAVLEGEE--------F-R-NYTHEERMEKV 518 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~-~~~~~~~~~vi~g~~--------~-~-~~~~~~~~~~~ 518 (819)
+-+.+.++|++|+++|+++++.||+....+..+++++|+.. +....+++.+..... . . .++.+...+++
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 44678999999999999999999999999999999999852 222223343432210 0 0 01111100000
Q ss_pred h--------------------------------------h--hceec----------------------------cCCH-
Q 003452 519 D--------------------------------------K--ICVMA----------------------------RSSP- 529 (819)
Q Consensus 519 ~--------------------------------------~--~~v~a----------------------------r~sP- 529 (819)
. . ..+.. ...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 0 0 00011 1111
Q ss_pred -hhHHHHHHHHHh-------CCCEEEEEcCCCCCHHHhhhCCcceeeCCCCh-HH-----HHhhcCEEEeCCChhHHHHH
Q 003452 530 -FDKLLMVQCLKQ-------KGHVVAVTRDGTNDAPALKETDIGLSMGIQGT-EV-----AKESSDIVILDDNFASVARV 595 (819)
Q Consensus 530 -~~K~~iV~~L~~-------~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt-~~-----ak~aaDivl~dd~f~~i~~~ 595 (819)
.+|..-++.|.+ ..+.|+++|||.||.+||+.|++|+||| ++. +. .+..+|++....+-+++.++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 263 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWREG 263 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHHHH
Confidence 245555555544 2356889999999999999999999999 433 21 34578898888888888877
Q ss_pred HH
Q 003452 596 LR 597 (819)
Q Consensus 596 i~ 597 (819)
++
T Consensus 264 l~ 265 (271)
T PRK03669 264 LD 265 (271)
T ss_pred HH
Confidence 76
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=6.5e-07 Score=91.64 Aligned_cols=127 Identities=16% Similarity=0.166 Sum_probs=91.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceec--c
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA--R 526 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a--r 526 (819)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+...-. .....++... +.. .
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~---~~~~~~~~~~----------------i~~~~~ 127 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFC---HSLEVDEDGM----------------ITGYDL 127 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhc---ceEEECCCCe----------------EECccc
Confidence 4689999999999999 9999999999999999999999864210 0111111100 011 1
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
..|+.|...++.++..++.+.|+|||.||.+|.+.|++|+..+ ...+.....++..+. +++..+...+.
T Consensus 128 ~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~-~~~~el~~~l~ 196 (205)
T PRK13582 128 RQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV-HTYDELLAAID 196 (205)
T ss_pred cccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc-CCHHHHHHHHH
Confidence 2467888889999888889999999999999999999999987 444444455665322 26666665554
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.43 E-value=8.1e-05 Score=85.77 Aligned_cols=98 Identities=14% Similarity=0.169 Sum_probs=74.0
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
|++|++.+.+++++++|+++.++|+-+...+..+++..|+.+ .++.+++ ..++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd--------~Vigsd~------------------~~~~k 125 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD--------GVFASDG------------------TTNLK 125 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC--------EEEeCCC------------------ccccC
Confidence 578999999999999999999999999999999999999832 1222111 11355
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTE 574 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~ 574 (819)
|+.|.+.++..... +.+.++||..||.|+++.|+-.++++ .+..
T Consensus 126 g~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~ 169 (479)
T PRK08238 126 GAAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG-ASPG 169 (479)
T ss_pred CchHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC-CCHH
Confidence 66676655432222 22578899999999999999999998 4443
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.7e-06 Score=91.36 Aligned_cols=149 Identities=17% Similarity=0.104 Sum_probs=97.9
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccc----------------cc--cC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEE----------------FR--NY 509 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~----------------~~--~~ 509 (819)
+.+.+++.++|+.|++.|+++.++||.....+..+++++|+..+....+++.+..... +. .+
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGP 99 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCC
Confidence 3466789999999999999999999999999999999999875433233333332110 00 00
Q ss_pred CHHHHHHHh---------------------------------h-----hh--ceeccCCH--------------------
Q 003452 510 THEERMEKV---------------------------------D-----KI--CVMARSSP-------------------- 529 (819)
Q Consensus 510 ~~~~~~~~~---------------------------------~-----~~--~v~ar~sP-------------------- 529 (819)
+.+...+.+ . .+ .++..-++
T Consensus 100 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 179 (273)
T PRK00192 100 PYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRG 179 (273)
T ss_pred CHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEEC
Confidence 110000000 0 00 00100011
Q ss_pred ---------hhHHHHHHHHHhC----C-CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHH----hhc-CEEE--eCCC
Q 003452 530 ---------FDKLLMVQCLKQK----G-HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAK----ESS-DIVI--LDDN 588 (819)
Q Consensus 530 ---------~~K~~iV~~L~~~----g-~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak----~aa-Divl--~dd~ 588 (819)
.+|...++.+.+. . +.|+++||+.||.+|++.|++|++|+ ++.+..| .+| +.+. ..++
T Consensus 180 ~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~ 258 (273)
T PRK00192 180 GRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPG 258 (273)
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCC
Confidence 1566566555532 4 78999999999999999999999999 9999988 666 6666 4555
Q ss_pred hhHHHHHHH
Q 003452 589 FASVARVLR 597 (819)
Q Consensus 589 f~~i~~~i~ 597 (819)
-.++.++++
T Consensus 259 ~~Gv~~~l~ 267 (273)
T PRK00192 259 PEGWAEAIN 267 (273)
T ss_pred cHHHHHHHH
Confidence 677777765
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.41 E-value=6.3e-07 Score=84.74 Aligned_cols=118 Identities=18% Similarity=0.230 Sum_probs=96.1
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHH
Q 003452 456 KAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLM 535 (819)
Q Consensus 456 ~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~i 535 (819)
-.|+.+.++||++.++||.+...+..=|+++||.. ++-. -++|...
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------~~qG--~~dK~~a 87 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------LYQG--ISDKLAA 87 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce--------------------------------eeec--hHhHHHH
Confidence 47999999999999999999999999999999975 2222 2478877
Q ss_pred HHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCC----hhHHHHHHHHHHHHHHHHH
Q 003452 536 VQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN----FASVARVLRWGRCVHTNIQ 607 (819)
Q Consensus 536 V~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~----f~~i~~~i~~gR~~~~ni~ 607 (819)
.+.|.++ -+.|+++||..||.|+|++.++++|.. .+.+..++.||+|+.... +..+.+++..++..+.-..
T Consensus 88 ~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~~ 166 (170)
T COG1778 88 FEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEAL 166 (170)
T ss_pred HHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHHH
Confidence 7777654 367999999999999999999999998 889999999999988553 5566677776666655544
Q ss_pred H
Q 003452 608 K 608 (819)
Q Consensus 608 k 608 (819)
+
T Consensus 167 ~ 167 (170)
T COG1778 167 G 167 (170)
T ss_pred h
Confidence 3
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.41 E-value=5.8e-07 Score=87.71 Aligned_cols=110 Identities=17% Similarity=0.266 Sum_probs=80.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
.+-|++++.+..|++.|.+|.++||--..-+..+|.++||+..+.+.+.-+.-...++...... -.-+.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~-----------~ptsd 156 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTN-----------EPTSD 156 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccC-----------Ccccc
Confidence 4679999999999999999999999999999999999999975543222111111111111000 01122
Q ss_pred HhhHHHHHHHHHhC--CCEEEEEcCCCCCHHHhhhCCcceeeC
Q 003452 529 PFDKLLMVQCLKQK--GHVVAVTRDGTNDAPALKETDIGLSMG 569 (819)
Q Consensus 529 P~~K~~iV~~L~~~--g~~Va~~GDG~ND~~aL~~AdvGIamg 569 (819)
..-|..+++.+++. -+.++|+|||.||.+|+..||.=|+.|
T Consensus 157 sggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 157 SGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred CCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 34789999999885 467999999999999999988877776
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.41 E-value=8.7e-07 Score=90.21 Aligned_cols=117 Identities=19% Similarity=0.149 Sum_probs=81.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+...- ...+... +-.... +. .+....
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~----~~~~~~~-~~g~~~--------p~--~~~~~~ 144 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVY----SNELVFD-EKGFIQ--------PD--GIVRVT 144 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEE----EEEEEEc-CCCeEe--------cc--eeeEEc
Confidence 68999999999999999999999999999999999999975310 0011110 000000 00 111234
Q ss_pred HhhHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcC
Q 003452 529 PFDKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSD 581 (819)
Q Consensus 529 P~~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaD 581 (819)
|..|...++.+.++ .+.+.++||+.||.+|++.|+++++++ .+....+.++|
T Consensus 145 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 145 FDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred cccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 55677777666543 345899999999999999999999998 44444555555
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.26 E-value=3.3e-06 Score=88.67 Aligned_cols=66 Identities=17% Similarity=0.232 Sum_probs=55.6
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcC----EEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSD----IVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaD----ivl~dd~f~~i~~~i~ 597 (819)
.|...++.+.++ | ..++++||+.||.+|++.++.|++|+ ++.+..|+.|| +|...++-.++.+++.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 677888877654 3 35788999999999999999999999 89999999999 7776667778888775
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.26 E-value=5.3e-06 Score=85.80 Aligned_cols=137 Identities=16% Similarity=0.115 Sum_probs=89.8
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhcee--c
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVM--A 525 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~--a 525 (819)
-+++|++.+.++.|++.|+++.++||.....+..+.+..+.... .. ......+|..+....+ .-..+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~-i~-~n~~~~~~~~~~~~~p--------~~~~~~~~ 138 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR-IY-CNEADFSNEYIHIDWP--------HPCDGTCQ 138 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc-EE-eceeEeeCCeeEEeCC--------CCCccccc
Confidence 58999999999999999999999999999999999888754321 00 0112333333221100 00000 0
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhh--cCEEEeCCChhHHHHHHH
Q 003452 526 RSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKES--SDIVILDDNFASVARVLR 597 (819)
Q Consensus 526 r~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~a--aDivl~dd~f~~i~~~i~ 597 (819)
......|..+++.++...+.+.|+|||.||.+|++.||+.++=+ .-.+-.++. +.+.. ++|..+...++
T Consensus 139 ~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 139 NQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred cCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 11135799999998877788899999999999999999988754 211211111 22222 46777777664
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.2e-05 Score=83.63 Aligned_cols=128 Identities=20% Similarity=0.245 Sum_probs=84.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccce------ecccccccCCHHHHHHHhhhhc
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAV------LEGEEFRNYTHEERMEKVDKIC 522 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~v------i~g~~~~~~~~~~~~~~~~~~~ 522 (819)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+...... ..... +.|.....
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~-~~~~~~~~~g~~~g~~~~~-------------- 148 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIF-ANQILFGDSGEYAGFDENE-------------- 148 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEE-EeEEEEcCCCcEECccCCC--------------
Confidence 4789999999999999999999999999999999999999631100 00001 11110000
Q ss_pred eeccCCHhhHHHHHHHHHhC--CCEEEEEcCCCCCHHHhhh--CCcceeeCCCC-hHHHHhhcCEEEeCCChhHHHHH
Q 003452 523 VMARSSPFDKLLMVQCLKQK--GHVVAVTRDGTNDAPALKE--TDIGLSMGIQG-TEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~~~--g~~Va~~GDG~ND~~aL~~--AdvGIamg~~g-t~~ak~aaDivl~dd~f~~i~~~ 595 (819)
. ...+..|...++.+.++ .+.+.|+||+.||..|.+. ++++++.|... .+.....+|+++. ++..+.+.
T Consensus 149 ~--~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 222 (224)
T PLN02954 149 P--TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIEV 222 (224)
T ss_pred c--ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHHh
Confidence 0 01123476777766654 2568899999999999777 56666666322 2334556899886 66666543
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.08 E-value=4.4e-06 Score=84.29 Aligned_cols=92 Identities=21% Similarity=0.271 Sum_probs=68.4
Q ss_pred ccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHh-
Q 003452 452 PGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPF- 530 (819)
Q Consensus 452 ~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~- 530 (819)
|++.+.|+.++++|++++++||+....+..+|+.+|+.... ++ +.++..-. +....++.+|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~-------v~-~~~~~~~~---------~~~~~~~~~~~~ 154 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN-------VI-GNELFDNG---------GGIFTGRITGSN 154 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG-------EE-EEEEECTT---------CCEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE-------EE-EEeeeecc---------cceeeeeECCCC
Confidence 77779999999999999999999999999999999997521 11 11110000 11134444444
Q ss_pred --hHHHHHHHH------HhCCCEEEEEcCCCCCHHHhh
Q 003452 531 --DKLLMVQCL------KQKGHVVAVTRDGTNDAPALK 560 (819)
Q Consensus 531 --~K~~iV~~L------~~~g~~Va~~GDG~ND~~aL~ 560 (819)
.|...++.+ +.....+.++|||.||.||||
T Consensus 155 ~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 155 CGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp ESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 399999999 344789999999999999986
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.05 E-value=8e-06 Score=81.36 Aligned_cols=98 Identities=19% Similarity=0.222 Sum_probs=70.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC---CCccceecccccccCCHHHHHHHhhhhceec
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD---TSTGAVLEGEEFRNYTHEERMEKVDKICVMA 525 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~---~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a 525 (819)
+++|++.+.++.+++.|+++.++||.....+..+++.+|+..-... ....-.++|+... -.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~----------------~~ 136 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEG----------------QV 136 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCC----------------cc
Confidence 3689999999999999999999999999999999999998642100 0000011121000 01
Q ss_pred cCCHhhHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhC
Q 003452 526 RSSPFDKLLMVQCLKQK----GHVVAVTRDGTNDAPALKET 562 (819)
Q Consensus 526 r~sP~~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~A 562 (819)
...+..|...++.++++ .+.+.++|||.||.+|++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 24567899999887654 35689999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=3.8e-05 Score=79.71 Aligned_cols=128 Identities=22% Similarity=0.308 Sum_probs=89.3
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
.++.||+.+.++.|++.|+++.++||........+.+..|+.... ..++.+.... ...-
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF-----SVVIGGDSLP----------------NKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc-----cEEEcCCCCC----------------CCCc
Confidence 468999999999999999999999999999999999999986431 1222222111 0111
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc-ceee--CCC-ChHHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI-GLSM--GIQ-GTEVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv-GIam--g~~-gt~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
.|+--..+++.++...+.+.++||+.||..+.+.|++ +|.+ |.. ..+.....+|+++. ++..+..++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHH
Confidence 2332334444454445678999999999999999998 4444 321 23455567888874 88888877654
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.7e-05 Score=82.28 Aligned_cols=135 Identities=17% Similarity=0.145 Sum_probs=86.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhce--e-c
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICV--M-A 525 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v--~-a 525 (819)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +..... .......+|..+..-.+. -.. + .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i-~~n~~~~~~~~~~~~kp~--------p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQI-YCNGSDFSGEYITITWPH--------PCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcE-EEeEEEecCCeeEEeccC--------Cccccccc
Confidence 78999999999999999999999999999999999988 643110 000112333322110000 000 0 0
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhh--cCEEEeCCChhHHHHHHH
Q 003452 526 RSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKES--SDIVILDDNFASVARVLR 597 (819)
Q Consensus 526 r~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~a--aDivl~dd~f~~i~~~i~ 597 (819)
++ ...|..+++.++...+.+.|+|||.||.+|.+.||+.++-+ .-.+.+++. +.+.+ ++|..+...++
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l~ 213 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTELK 213 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHHH
Confidence 01 13488888888877778999999999999999999977733 111222222 33333 36777766654
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.9e-05 Score=80.67 Aligned_cols=106 Identities=14% Similarity=0.080 Sum_probs=77.5
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC-C--CccceecccccccCCHHHHHHHhhhhce
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD-T--STGAVLEGEEFRNYTHEERMEKVDKICV 523 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~-~--~~~~vi~g~~~~~~~~~~~~~~~~~~~v 523 (819)
..+++|++.+.++.+++.|+++.++||.....+..+++.+|+..--.. . ...-..+|+..
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~----------------- 147 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNID----------------- 147 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCcc-----------------
Confidence 457899999999999999999999999999999999999998642100 0 00001112110
Q ss_pred eccCCHhhHHHHHHHHHh-CC---CEEEEEcCCCCCHHHhhhCCcceeeC
Q 003452 524 MARSSPFDKLLMVQCLKQ-KG---HVVAVTRDGTNDAPALKETDIGLSMG 569 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~-~g---~~Va~~GDG~ND~~aL~~AdvGIamg 569 (819)
--.+.++.|...++.+.+ .+ +.+.++||+.||.|+++.|+.++++.
T Consensus 148 ~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 148 GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 012345778887776654 33 36788999999999999999999887
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.8e-05 Score=80.03 Aligned_cols=44 Identities=16% Similarity=0.192 Sum_probs=39.3
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKP 491 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~ 491 (819)
+..-+++.++|++|+++|++++++||.....+..+.+++|+..+
T Consensus 14 ~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~ 57 (225)
T TIGR02461 14 GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPP 57 (225)
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCc
Confidence 44556799999999999999999999999999999999998653
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.99 E-value=2.3e-05 Score=78.71 Aligned_cols=114 Identities=14% Similarity=0.118 Sum_probs=77.6
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc-
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR- 526 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar- 526 (819)
-+++|++.+.++.|++.|+++.++|+.+...+..+.+..|+...- ..++..+...+ ....+.-...++.++..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~~-~~g~~~~~~~~~~~~~~~ 144 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF-----IEIYSNPASFD-NDGRHIVWPHHCHGCCSC 144 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe-----eEEeccCceEC-CCCcEEEecCCCCccCcC
Confidence 489999999999999999999999999999999999999986421 11221111000 00000000011111111
Q ss_pred CCHhhHHHHHHHHHhC-CCEEEEEcCCCCCHHHhhhCCccee
Q 003452 527 SSPFDKLLMVQCLKQK-GHVVAVTRDGTNDAPALKETDIGLS 567 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~-g~~Va~~GDG~ND~~aL~~AdvGIa 567 (819)
.....|.++++.++++ .+.+.++|||.||..|.++||+-+|
T Consensus 145 ~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 1223689999999887 7889999999999999999988664
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.1e-05 Score=82.04 Aligned_cols=149 Identities=15% Similarity=0.124 Sum_probs=97.1
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCC--CCCCccceeccccc-c-----------------
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPG--QDTSTGAVLEGEEF-R----------------- 507 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~--~~~~~~~vi~g~~~-~----------------- 507 (819)
.+..|...++++++++.|+.++.+||+....++.+.+++++..++ ...+++.+..+... .
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 456788999999999999999999999999999999999987652 11223333221100 0
Q ss_pred --------cC-----------------CHHH-------HHHHhhh----hce-ec-----cCCH--hhHHHHHHHHHhC-
Q 003452 508 --------NY-----------------THEE-------RMEKVDK----ICV-MA-----RSSP--FDKLLMVQCLKQK- 542 (819)
Q Consensus 508 --------~~-----------------~~~~-------~~~~~~~----~~v-~a-----r~sP--~~K~~iV~~L~~~- 542 (819)
.+ ..+. +.+.+.+ +.+ .+ ...| ..|...++.+.++
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 00 0011 1111111 111 11 1222 3788888888664
Q ss_pred ---CCEEEEEcCCCCCHHHhhh-CCcceeeCCCChHHHHhhcC-------EEEeCCChhHHHHHHH
Q 003452 543 ---GHVVAVTRDGTNDAPALKE-TDIGLSMGIQGTEVAKESSD-------IVILDDNFASVARVLR 597 (819)
Q Consensus 543 ---g~~Va~~GDG~ND~~aL~~-AdvGIamg~~gt~~ak~aaD-------ivl~dd~f~~i~~~i~ 597 (819)
.+.|+++||+.||.+|++. ++.|++|+ ++.+..|+.++ ++.....-+++.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3578999999999999998 67999999 88888887543 4444444566666654
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.94 E-value=6.1e-05 Score=78.22 Aligned_cols=128 Identities=21% Similarity=0.317 Sum_probs=96.3
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
...+-|+++++++.|+++|++..++|+++...+..+.+..|+...- ..++.+.+.. ..+
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F-----~~i~g~~~~~----------------~~K 145 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF-----DVIVGGDDVP----------------PPK 145 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc-----ceEEcCCCCC----------------CCC
Confidence 5578899999999999999999999999999999999999998742 1222222211 122
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCC---cceeeCCC-ChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETD---IGLSMGIQ-GTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Ad---vGIamg~~-gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
-.|.....+.+.+....+.+.|+||..+|..|=+.|+ ||+..|.+ +.......+|+++. ++..+...+.
T Consensus 146 P~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l~ 218 (220)
T COG0546 146 PDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALLA 218 (220)
T ss_pred cCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHHh
Confidence 3455666666666555447999999999999999998 77888843 45677777999987 6777665543
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.87 E-value=8.9e-05 Score=76.88 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=35.7
Q ss_pred ccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 003452 452 PGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGIL 489 (819)
Q Consensus 452 ~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~ 489 (819)
+.++++|+.++++|+++.++||.....+..+.+++|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.85 E-value=4e-05 Score=71.77 Aligned_cols=117 Identities=18% Similarity=0.175 Sum_probs=77.1
Q ss_pred EeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhcee
Q 003452 445 GIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVM 524 (819)
Q Consensus 445 ~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 524 (819)
.-..++++++.+.+++|++.|++++++||.....+....+++|+.... ..++......................+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~ 94 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF-----DPVITSNGAAIYYPKEGLFLGGGPFDI 94 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh-----hheeccchhhhhccccccccccccccc
Confidence 345688999999999999999999999999999999999999984321 111111100000000000001111134
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhC-Ccce
Q 003452 525 ARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKET-DIGL 566 (819)
Q Consensus 525 ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~A-dvGI 566 (819)
.+-.|+.+..+.+.+....+.+.++||+.||..|.+.+ .-++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 95 GKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred CCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 45667777777777766567899999999999999984 4343
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0001 Score=75.56 Aligned_cols=126 Identities=16% Similarity=0.183 Sum_probs=86.3
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-++.|++.+.+++|+++|+++.++|+.....+..+.+..|+.... ..++...+. ...+-
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~----------------~~~KP 132 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-----DHVIGSDEV----------------PRPKP 132 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-----eeEEecCcC----------------CCCCC
Confidence 378899999999999999999999999999999999999986421 112221111 01222
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCccee---eCC-CChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS---MGI-QGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIa---mg~-~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
.|+-=..+++.++-..+.+.|+||+.+|..+-++|++... -|. +..+..++.+|+++. ++..+..++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~ 203 (205)
T TIGR01454 133 APDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALC 203 (205)
T ss_pred ChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHh
Confidence 3333334444444345679999999999999999998643 331 233456778999875 666666554
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00041 Score=81.55 Aligned_cols=41 Identities=10% Similarity=0.034 Sum_probs=36.9
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILK 490 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~ 490 (819)
.-+.+.++|+.++++|+.+++.||+....+..+++++|+..
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~ 474 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKD 474 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34568999999999999999999999999999999999753
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00038 Score=79.05 Aligned_cols=143 Identities=19% Similarity=0.184 Sum_probs=89.2
Q ss_pred HHHHH-HHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCC--CCCccceecccccc-----------------------
Q 003452 454 VKKAV-EDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQ--DTSTGAVLEGEEFR----------------------- 507 (819)
Q Consensus 454 v~~aI-~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~--~~~~~~vi~g~~~~----------------------- 507 (819)
..+++ +++++.|+.+++.||+....+..+.++.++..++. ..++..+..+....
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 44555 88999999999999999999999999999877631 00111111111000
Q ss_pred cC--------------------CHH---H----HHHHhh----hhce------eccCCH--hhHHHHHHHHHhC----C-
Q 003452 508 NY--------------------THE---E----RMEKVD----KICV------MARSSP--FDKLLMVQCLKQK----G- 543 (819)
Q Consensus 508 ~~--------------------~~~---~----~~~~~~----~~~v------~ar~sP--~~K~~iV~~L~~~----g- 543 (819)
.+ .++ + +.+.+. ++.+ +-...| ..|...++.|.++ |
T Consensus 113 ~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi 192 (413)
T PLN02382 113 KFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGK 192 (413)
T ss_pred cCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCC
Confidence 00 000 1 111111 1111 112233 2588888887655 2
Q ss_pred --CEEEEEcCCCCCHHHhhhCC-cceeeCCCChHHHHhhc--------CEEEe-CCChhHHHHHHH
Q 003452 544 --HVVAVTRDGTNDAPALKETD-IGLSMGIQGTEVAKESS--------DIVIL-DDNFASVARVLR 597 (819)
Q Consensus 544 --~~Va~~GDG~ND~~aL~~Ad-vGIamg~~gt~~ak~aa--------Divl~-dd~f~~i~~~i~ 597 (819)
+.+.++||+.||.+||+.|+ .||+|| ++.+..|+.+ +++.. +.+-++|.++++
T Consensus 193 ~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 193 APVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred ChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 47888999999999999999 699999 8998888743 45544 234555655554
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00027 Score=75.16 Aligned_cols=43 Identities=5% Similarity=0.086 Sum_probs=39.0
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKP 491 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~ 491 (819)
..-+.+.++|++|+++||.|++.||........+.+++|+..+
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 3556789999999999999999999999999999999998754
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00045 Score=71.21 Aligned_cols=125 Identities=14% Similarity=0.136 Sum_probs=85.1
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|+++|+++.++|+.....+..+-+..|+.... ..++.+.+.. ..+..
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f-----~~i~~~~~~~----------------~~Kp~ 140 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF-----DVVITLDDVE----------------HAKPD 140 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce-----eEEEecCcCC----------------CCCCC
Confidence 47899999999999999999999999999999999999987531 1222222110 11223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc---eeeCCCCh-HHHHhhcCEEEeCCChhHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG---LSMGIQGT-EVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG---Iamg~~gt-~~ak~aaDivl~dd~f~~i~~~i 596 (819)
|+--..+.+.+....+.+.|+||+.+|..|-++|++- +.-|.... +.....+|.++. ++..+.+++
T Consensus 141 p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 141 PEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred cHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 3333444444443446789999999999999999984 33442222 234456888765 677776654
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00045 Score=74.18 Aligned_cols=126 Identities=17% Similarity=0.240 Sum_probs=82.4
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
..++.|++.++++.|++.|+++.++||.+...+..+.++.|+.... ..++.+.+.. ..+
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-----~~i~~~d~~~----------------~~K 157 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-----RWIIGGDTLP----------------QKK 157 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-----eEEEecCCCC----------------CCC
Confidence 3478999999999999999999999999999999998888885421 1122222110 011
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc-eee--CCC-ChHHHHhhcCEEEeCCChhHHHHH
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG-LSM--GIQ-GTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG-Iam--g~~-gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
-.|+-=..+.+.+.-..+.+.|+||+.||..+-+.|++. +++ |.. ..+..+..+|.++. ++..+.++
T Consensus 158 p~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~ 228 (272)
T PRK13223 158 PDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPG 228 (272)
T ss_pred CCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHH
Confidence 122222233333332346789999999999999999973 333 321 22234557888884 66666544
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00047 Score=70.81 Aligned_cols=123 Identities=15% Similarity=0.205 Sum_probs=80.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+...- ..++.+.+.. ..+-.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~Kp~ 143 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-----SVLIGGDSLA----------------QRKPH 143 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-----cEEEecCCCC----------------CCCCC
Confidence 68999999999999999999999999999999999999986531 1222222110 01112
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceee---CCCC-hHHHHhhcCEEEeCCChhHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSM---GIQG-TEVAKESSDIVILDDNFASVAR 594 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIam---g~~g-t~~ak~aaDivl~dd~f~~i~~ 594 (819)
|+-=....+.+.-..+.+.++||+.||..+.++|++-... |... .+.....+|+++. ++..+..
T Consensus 144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 2222233333333345688999999999999999986542 2111 1233456888775 5655543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00081 Score=71.99 Aligned_cols=139 Identities=13% Similarity=0.225 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHh-cCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceec--cc---------------------
Q 003452 449 PCRPGVKKAVEDCQY-AGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLE--GE--------------------- 504 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~-aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~--g~--------------------- 504 (819)
.+-+++.++++.|++ .|+.+.++||+....+..+.+.+++.-. ..++..+.+ |.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i--~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~ 113 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLA--GVHGAERRDINGKTHIVHLPDAIARDISVQLHTA 113 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEE--EeCCCeeecCCCCeeeccCChhHHHHHHHHHHHH
Confidence 345789999999998 7999999999999999988877664210 000111110 00
Q ss_pred -------c-----------cccCC--HHHHHH---Hhh----hhcee-----ccCCH--hhHHHHHHHHHhC----CCEE
Q 003452 505 -------E-----------FRNYT--HEERME---KVD----KICVM-----ARSSP--FDKLLMVQCLKQK----GHVV 546 (819)
Q Consensus 505 -------~-----------~~~~~--~~~~~~---~~~----~~~v~-----ar~sP--~~K~~iV~~L~~~----g~~V 546 (819)
. ++... ++.+.. .+. ...+. ....| .+|...++.+.+. ...+
T Consensus 114 ~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v 193 (266)
T PRK10187 114 LAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTP 193 (266)
T ss_pred hccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 0 00111 011111 111 01111 11122 3788877776554 3578
Q ss_pred EEEcCCCCCHHHhhhC----CcceeeCCCChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 547 AVTRDGTNDAPALKET----DIGLSMGIQGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 547 a~~GDG~ND~~aL~~A----dvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
.++||+.||.+|++.+ +.||+|| ++. ..|++.+. +...+...+
T Consensus 194 ~~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 194 VFVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSWL 240 (266)
T ss_pred EEEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHHH
Confidence 8899999999999999 9999999 553 44777766 455554444
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0012 Score=68.88 Aligned_cols=127 Identities=13% Similarity=0.196 Sum_probs=86.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+... ...++.+.+.. ..+-.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~-----f~~i~~~~~~~----------------~~KP~ 153 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQR-----CAVLIGGDTLA----------------ERKPH 153 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhc-----ccEEEecCcCC----------------CCCCC
Confidence 6789999999999999999999999999988888888888652 12222222110 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCccee---eCCC-C-hHHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS---MGIQ-G-TEVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIa---mg~~-g-t~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
|+-=..+++.+.-..+.+.|+||+.||..|-+.|++... -|.. . .+.....+|+++. ++..+.+.+.|
T Consensus 154 p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~~~~ 226 (229)
T PRK13226 154 PLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNPATW 226 (229)
T ss_pred HHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHHhcC
Confidence 433344555555445679999999999999999998642 2311 1 1223456898885 77777766554
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0009 Score=69.44 Aligned_cols=120 Identities=16% Similarity=0.234 Sum_probs=80.1
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-++.|++.++++.|++.|+++.++|+........+.+..|+...- ..++.+.+.. ..+-
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~Kp 149 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF-----DALASAEKLP----------------YSKP 149 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc-----cEEEEcccCC----------------CCCC
Confidence 478899999999999999999999999999999999999987631 2223222211 1122
Q ss_pred CHhhHHHHHHHHHhC---CCEEEEEcCCCCCHHHhhhCCcceeeCCCCh---HHHHhhcCEEEeCCChhHHH
Q 003452 528 SPFDKLLMVQCLKQK---GHVVAVTRDGTNDAPALKETDIGLSMGIQGT---EVAKESSDIVILDDNFASVA 593 (819)
Q Consensus 528 sP~~K~~iV~~L~~~---g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt---~~ak~aaDivl~dd~f~~i~ 593 (819)
.|+ -+...+++. .+.+.|+||..||+.+-++|++....-..+. +.-...+|.++. ++..+.
T Consensus 150 ~~~---~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 150 HPE---VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred CHH---HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 232 222333333 3568999999999999999998654331221 122335777765 565554
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0036 Score=66.67 Aligned_cols=131 Identities=17% Similarity=0.219 Sum_probs=83.0
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCC-------CccceecccccccCCHHHHHHHhhh
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDT-------STGAVLEGEEFRNYTHEERMEKVDK 520 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~-------~~~~vi~g~~~~~~~~~~~~~~~~~ 520 (819)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+..++... +..-+++|.. ..+
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~-~P~----------- 187 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK-GPL----------- 187 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC-CCc-----------
Confidence 468999999999999999999999999999999999999986543211 0111222211 000
Q ss_pred hceeccCCHhhHHHHHHH-----HH--hCCCEEEEEcCCCCCHHHhhhC---CcceeeC--CCC----hHHHHhhcCEEE
Q 003452 521 ICVMARSSPFDKLLMVQC-----LK--QKGHVVAVTRDGTNDAPALKET---DIGLSMG--IQG----TEVAKESSDIVI 584 (819)
Q Consensus 521 ~~v~ar~sP~~K~~iV~~-----L~--~~g~~Va~~GDG~ND~~aL~~A---dvGIamg--~~g----t~~ak~aaDivl 584 (819)
+. ...|.+.+.. ++ .....|.++|||.||++|-.-. +-=+.+| ... -+.=+++-|||+
T Consensus 188 --i~----~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl 261 (277)
T TIGR01544 188 --IH----TFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 261 (277)
T ss_pred --cc----ccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEE
Confidence 11 1345543332 22 1235688999999999995433 1122222 111 223467889999
Q ss_pred eCCChhHHHHHH
Q 003452 585 LDDNFASVARVL 596 (819)
Q Consensus 585 ~dd~f~~i~~~i 596 (819)
.+|.--.++..+
T Consensus 262 ~~D~t~~v~~~i 273 (277)
T TIGR01544 262 VQDETLEVANSI 273 (277)
T ss_pred ECCCCchHHHHH
Confidence 998765665544
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0014 Score=69.36 Aligned_cols=52 Identities=21% Similarity=0.271 Sum_probs=42.5
Q ss_pred hHHHHHHHHHhCCCEEEEEcC----CCCCHHHhhhC-CcceeeCCCChHHHHhhcCEE
Q 003452 531 DKLLMVQCLKQKGHVVAVTRD----GTNDAPALKET-DIGLSMGIQGTEVAKESSDIV 583 (819)
Q Consensus 531 ~K~~iV~~L~~~g~~Va~~GD----G~ND~~aL~~A-dvGIamg~~gt~~ak~aaDiv 583 (819)
+|..-++.|.++.+.|+++|| |-||.+||+.| -.|++++ ++.+..|..+.++
T Consensus 188 sKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 188 DKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred cHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 677777777777678899999 99999999976 6778888 8888888776554
|
|
| >PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases [] | Back alignment and domain information |
|---|
Probab=97.16 E-value=8e-05 Score=55.95 Aligned_cols=35 Identities=11% Similarity=0.187 Sum_probs=28.6
Q ss_pred chhhccCCCCCCCcccchhhhhh-hhhcchhhhhhHHH
Q 003452 11 SIESLLNFPATLNVPTKKWHSAF-TKIYCSRTLLSLAE 47 (819)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 47 (819)
.++...++|| +++++|||+|+ +|+|++|||+..++
T Consensus 5 ~Fdi~~Kn~s--~e~l~rWR~a~~lv~N~~RRFR~~~d 40 (47)
T PF12515_consen 5 NFDIPAKNSS--EEALRRWRQAVGLVKNARRRFRYTAD 40 (47)
T ss_pred ccCCCCCCCC--HHHHHHHHHHhHHhccccceeeeccc
Confidence 3455556665 99999999999 99999999987765
|
This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0027 Score=65.44 Aligned_cols=107 Identities=12% Similarity=0.085 Sum_probs=74.1
Q ss_pred CCCccHHHHHH-HHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVE-DCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~-~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
.++|++.+.++ .+++.|++++++|+-....+..+|+..|+...+ . ++ |.++..-... + ..-..|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-----~-~i-~t~le~~~gg-------~-~~g~~c 158 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-----N-LI-ASQIERGNGG-------W-VLPLRC 158 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-----c-EE-EEEeEEeCCc-------e-EcCccC
Confidence 46899999996 789899999999999999999999996664321 1 11 2222110000 0 012346
Q ss_pred CHhhHHHHHHHHHh-CCCEEEEEcCCCCCHHHhhhCCcceeeCC
Q 003452 528 SPFDKLLMVQCLKQ-KGHVVAVTRDGTNDAPALKETDIGLSMGI 570 (819)
Q Consensus 528 sP~~K~~iV~~L~~-~g~~Va~~GDG~ND~~aL~~AdvGIamg~ 570 (819)
..++|.+-++..-. ..+..-+=||+.||.|||+.||.++++..
T Consensus 159 ~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 159 LGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred CChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 67889887765432 22334456999999999999999999873
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0032 Score=65.06 Aligned_cols=125 Identities=22% Similarity=0.274 Sum_probs=82.2
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC--CCCCCCCccceecccccccCCHHHHHHHhhhhceec
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGIL--KPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA 525 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~--~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a 525 (819)
.++.||+.+.+++|++.|+++.++|+-....+..+.+..|+. .. ...++.+.+.. ..
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~-----f~~i~~~~~~~----------------~~ 144 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDD-----VDAVVCPSDVA----------------AG 144 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhcc-----CCEEEcCCcCC----------------CC
Confidence 479999999999999999999999999999999999999986 32 12233322211 01
Q ss_pred cCCHhhHHHHHHHHHhC-CCEEEEEcCCCCCHHHhhhCCcceeeC-CCCh----HHHHhhcCEEEeCCChhHHHHH
Q 003452 526 RSSPFDKLLMVQCLKQK-GHVVAVTRDGTNDAPALKETDIGLSMG-IQGT----EVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 526 r~sP~~K~~iV~~L~~~-g~~Va~~GDG~ND~~aL~~AdvGIamg-~~gt----~~ak~aaDivl~dd~f~~i~~~ 595 (819)
+-.|+-=....+.+.-. .+.+.|+||+.+|..+-+.|++..+++ ..|. +.....+|.++. ++..+..+
T Consensus 145 KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~~~l~~~ 218 (220)
T TIGR03351 145 RPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SVADLPAL 218 (220)
T ss_pred CCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CHHHHHHh
Confidence 22232222233333222 257999999999999999999986322 1222 122345777764 66665544
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0061 Score=65.45 Aligned_cols=122 Identities=13% Similarity=0.128 Sum_probs=81.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+.+...+..+-+.+|+...- ..++.+.+.. ..
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-----~~vi~~~~~~-------------------~k 197 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-----SVVQAGTPIL-------------------SK 197 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-----EEEEecCCCC-------------------CC
Confidence 67899999999999999999999999999999999999986531 1222222110 01
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCccee---eCCCC-hHHHHhhcCEEEeCCChhHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS---MGIQG-TEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIa---mg~~g-t~~ak~aaDivl~dd~f~~i~~~i 596 (819)
|+-=..+++.+.-..+.++|+||+.+|..+-++|++-.. -|... .+.....+|+++. ++..+.+++
T Consensus 198 ~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 198 RRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred HHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 211112222222234568999999999999999998533 23111 1233446898875 777777655
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0055 Score=65.32 Aligned_cols=121 Identities=12% Similarity=0.108 Sum_probs=81.2
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+... ...++.+.+.. ..+-.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~-----Fd~ii~~~d~~----------------~~KP~ 167 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF-----FSVVLAAEDVY----------------RGKPD 167 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh-----CcEEEecccCC----------------CCCCC
Confidence 5789999999999999999999999999999999999998653 22344443321 11223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcce-eeCCCChHHHHhhcCEEEeCCChhHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGL-SMGIQGTEVAKESSDIVILDDNFASV 592 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGI-amg~~gt~~ak~aaDivl~dd~f~~i 592 (819)
|+-=...++.+.-..+.+.|+||..+|..|=+.|++-. ++...........+|.++. ++..+
T Consensus 168 Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el 230 (260)
T PLN03243 168 PEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDL 230 (260)
T ss_pred HHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHH
Confidence 33223334444434456899999999999999999843 2221222222334777765 55544
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.004 Score=64.21 Aligned_cols=106 Identities=12% Similarity=0.090 Sum_probs=74.5
Q ss_pred CCCccHHHHH-HHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceeccccccc-CCHHHHHHHhhhhceecc
Q 003452 449 PCRPGVKKAV-EDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRN-YTHEERMEKVDKICVMAR 526 (819)
Q Consensus 449 ~lr~~v~~aI-~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~-~~~~~~~~~~~~~~v~ar 526 (819)
.++|++.+.+ +.+++.|+++.++|+-...-+..+++.+|+...+ . ++ |.++.. ++. + -.-..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-----~-~i-~t~l~~~~tg--------~-~~g~~ 158 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-----N-LI-ASQMQRRYGG--------W-VLTLR 158 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-----c-eE-EEEEEEEEcc--------E-ECCcc
Confidence 5589999999 5788899999999999999999999999963211 1 11 222211 000 0 01234
Q ss_pred CCHhhHHHHHHHHH-hCCCEEEEEcCCCCCHHHhhhCCcceeeCC
Q 003452 527 SSPFDKLLMVQCLK-QKGHVVAVTRDGTNDAPALKETDIGLSMGI 570 (819)
Q Consensus 527 ~sP~~K~~iV~~L~-~~g~~Va~~GDG~ND~~aL~~AdvGIamg~ 570 (819)
|..+.|.+.++..- ......-+=||..||.|||+.|+-+++++.
T Consensus 159 c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 159 CLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred CCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 66788988777543 233334455999999999999999999973
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0063 Score=64.41 Aligned_cols=116 Identities=16% Similarity=0.093 Sum_probs=80.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+-+...+..+-+..|+... ...++.+.+.. ..+-.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~-----Fd~iv~~~~~~----------------~~KP~ 166 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF-----FQAVIIGSECE----------------HAKPH 166 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh-----CcEEEecCcCC----------------CCCCC
Confidence 5789999999999999999999999999999999999998753 22334443321 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCccee---eCCCChHHHHhhcCEEEe
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS---MGIQGTEVAKESSDIVIL 585 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIa---mg~~gt~~ak~aaDivl~ 585 (819)
|+--....+.+.-..+.+.|+||..+|..+=++|++-.. -|....+.....+|+++.
T Consensus 167 p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~ 226 (248)
T PLN02770 167 PDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIK 226 (248)
T ss_pred hHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEec
Confidence 433344444444445678999999999999999998432 221112233446888876
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.002 Score=65.82 Aligned_cols=39 Identities=23% Similarity=0.350 Sum_probs=35.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECG 487 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~G 487 (819)
++.+++.+++++|++.|+++.++||.....+..+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999999998844
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0033 Score=63.94 Aligned_cols=94 Identities=16% Similarity=0.107 Sum_probs=68.4
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
.+++.+++.++++.|++.|+++.++||.....+..+.+.+|+.... ..++.+.+ +..+
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f-----~~~~~~~~-----------------~~~K 161 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF-----PVQIWMED-----------------CPPK 161 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC-----CEEEeecC-----------------CCCC
Confidence 4557778899999999999999999999999999999999987531 12222222 1123
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhC
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKET 562 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~A 562 (819)
-.|+--....+.+.-..+.+.|+||+.+|+.+-++|
T Consensus 162 P~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 162 PNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred cCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 445544555555555556799999999999876654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0098 Score=63.64 Aligned_cols=124 Identities=14% Similarity=0.177 Sum_probs=81.0
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+.... ...++.+.+.. ..+-.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~----~d~i~~~~~~~----------------~~KP~ 160 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR----PDHVVTTDDVP----------------AGRPY 160 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC----ceEEEcCCcCC----------------CCCCC
Confidence 56799999999999999999999999999888888887765421 01222222210 11122
Q ss_pred HhhHHHHHHHHHhCC----CEEEEEcCCCCCHHHhhhCCc---ceeeCCCC------------------------hHHHH
Q 003452 529 PFDKLLMVQCLKQKG----HVVAVTRDGTNDAPALKETDI---GLSMGIQG------------------------TEVAK 577 (819)
Q Consensus 529 P~~K~~iV~~L~~~g----~~Va~~GDG~ND~~aL~~Adv---GIamg~~g------------------------t~~ak 577 (819)
|+ -+.+.+++.| +.+.|+||+.+|..+=+.|++ |+.-|... .+...
T Consensus 161 p~---~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (267)
T PRK13478 161 PW---MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRA 237 (267)
T ss_pred hH---HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 22 2333344332 568999999999999999997 55444210 12233
Q ss_pred hhcCEEEeCCChhHHHHHHH
Q 003452 578 ESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 578 ~aaDivl~dd~f~~i~~~i~ 597 (819)
.-+|+++. ++..+...+.
T Consensus 238 ~~a~~vi~--~~~~l~~~l~ 255 (267)
T PRK13478 238 AGAHYVID--TIADLPAVIA 255 (267)
T ss_pred cCCCeehh--hHHHHHHHHH
Confidence 45788875 6777776653
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0077 Score=63.81 Aligned_cols=97 Identities=15% Similarity=0.119 Sum_probs=67.1
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.+.++.|++.|+++.++|+.....+..+-+..|+.... ...++.+.+.. ..+-.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f----~d~ii~~~~~~----------------~~KP~ 158 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR----PDYNVTTDDVP----------------AGRPA 158 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC----CceEEccccCC----------------CCCCC
Confidence 56799999999999999999999999999999999999986531 01223322211 11222
Q ss_pred HhhHHHHHHHHHhC-CCEEEEEcCCCCCHHHhhhCCcc
Q 003452 529 PFDKLLMVQCLKQK-GHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 529 P~~K~~iV~~L~~~-g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
|+-=....+.+.-. .+.+.|+||..+|..+=+.|++-
T Consensus 159 p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 159 PWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 33222333333321 34589999999999999999974
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.026 Score=56.93 Aligned_cols=147 Identities=20% Similarity=0.260 Sum_probs=95.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCC-----Cccceecccc---------cccCCHHHH
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDT-----STGAVLEGEE---------FRNYTHEER 514 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~-----~~~~vi~g~~---------~~~~~~~~~ 514 (819)
.+-||+.++++.+++. ....++|---.+-+.++|.-+|++..+... +...+-++.. ...++.+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4569999999999875 566777888899999999999997543210 0000001100 001122222
Q ss_pred HHHhhhhceeccCCHhh---------------HHHHHHHHHhC---CCEEEEEcCCCCCHHHhhhCCc--ceeeCCCChH
Q 003452 515 MEKVDKICVMARSSPFD---------------KLLMVQCLKQK---GHVVAVTRDGTNDAPALKETDI--GLSMGIQGTE 574 (819)
Q Consensus 515 ~~~~~~~~v~ar~sP~~---------------K~~iV~~L~~~---g~~Va~~GDG~ND~~aL~~Adv--GIamg~~gt~ 574 (819)
.+.++. +|.|..|.+ |.++++.+.+. ....+++||.+.|..||+.+.= |+|+.-||.+
T Consensus 162 fe~lDe--~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 162 FEKLDE--LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHH--HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 222222 466666654 45555555443 3456889999999999998742 3666667889
Q ss_pred HHHhhcCEEEeCCChhHHHHHHHH
Q 003452 575 VAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 575 ~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
-|...||+.+...+..++..++..
T Consensus 240 Yal~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccccceEEeccchhhhhHHHHH
Confidence 999999999998888887777764
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.011 Score=61.16 Aligned_cols=115 Identities=17% Similarity=0.205 Sum_probs=73.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.+.++.|+++|+++.++|+.....+...-+..|+... ..++.+.+.. ..+-.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~------~~i~~~~~~~----------------~~KP~ 140 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP------EVFVTAERVK----------------RGKPE 140 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc------cEEEEHHHhc----------------CCCCC
Confidence 5789999999999999999999999887777766667777321 1222222211 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc-eeeCCCChHHHHhhcCEEEe
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG-LSMGIQGTEVAKESSDIVIL 585 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG-Iamg~~gt~~ak~aaDivl~ 585 (819)
|+-=....+.+.-..+.+.|+||..+|+.+=+.|++- |++...........+|+++.
T Consensus 141 p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 141 PDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred cHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 3322333333333346799999999999999999984 44441112223345777665
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.016 Score=56.88 Aligned_cols=102 Identities=22% Similarity=0.231 Sum_probs=68.4
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHH---HHHHHc---C--CCCCCCCCCccceec-ccccccCCHHHHHHH
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAK---AIATEC---G--ILKPGQDTSTGAVLE-GEEFRNYTHEERMEK 517 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~---~iA~~~---G--I~~~~~~~~~~~vi~-g~~~~~~~~~~~~~~ 517 (819)
+|.+.|++.+++++++++|+++.++||+....+. ....++ | +.. ..++.. |..+..+..
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~------g~li~~~g~~~~~~~~------ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH------GPVLLSPDRLFAALHR------ 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC------ceEEEcCCcchhhhhc------
Confidence 4678899999999999999999999999988874 444452 3 322 122222 222211111
Q ss_pred hhhhceeccCCHhh-HHHHHHHHHh-----CCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 518 VDKICVMARSSPFD-KLLMVQCLKQ-----KGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 518 ~~~~~v~ar~sP~~-K~~iV~~L~~-----~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
.+. ...|+. |...++.+++ ....++..||+.+|+.+.++++|-
T Consensus 93 ----e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 ----EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ----ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 022 233443 8888887776 356778899999999999887664
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0072 Score=63.29 Aligned_cols=90 Identities=20% Similarity=0.248 Sum_probs=63.6
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCC----CHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhce
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGD----NVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICV 523 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD----~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v 523 (819)
-.+.|++.+.++.+++.|+++.++||. ...|+..+.+..|+..... ...++.|...
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~---f~vil~gd~~----------------- 172 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM---NPVIFAGDKP----------------- 172 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc---eeEEEcCCCC-----------------
Confidence 446777999999999999999999996 4679999999999943210 1222222210
Q ss_pred eccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 524 MARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
.-.+|.. .+++.| .+.|+||..+|..+-++|++-
T Consensus 173 ----~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 ----GQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred ----CCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 0123443 344444 488999999999999999874
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0068 Score=63.48 Aligned_cols=89 Identities=20% Similarity=0.197 Sum_probs=63.5
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCC----CHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhcee
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGD----NVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVM 524 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD----~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 524 (819)
.+.+++.+.++.+++.|+++.++|+. ...++..+.+.+|+... ...++.++....
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-----f~~i~~~d~~~~---------------- 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-----NPVIFAGDKPGQ---------------- 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-----eeEEECCCCCCC----------------
Confidence 44555999999999999999999998 77899999999999652 123333332110
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 525 ARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 525 ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
..| +|. ..+++.| .+.|+||..||..+-+.|++-
T Consensus 173 --~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 --YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred --CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 112 232 2345555 478999999999999999863
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.019 Score=66.51 Aligned_cols=123 Identities=15% Similarity=0.085 Sum_probs=82.2
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+++.. ....
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f-----~~i~~~d~v~-----------------~~~k 387 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV-----TETFSIEQIN-----------------SLNK 387 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc-----ceeEecCCCC-----------------CCCC
Confidence 78899999999999999999999999999999999999986531 2233333221 1122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc-eeeCC-CChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG-LSMGI-QGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG-Iamg~-~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
|+-=....+.++ -+.+.|+||..+|..+-+.|++- |++.. .+.+.....+|+++. ++..+.+++.
T Consensus 388 P~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 454 (459)
T PRK06698 388 SDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILS 454 (459)
T ss_pred cHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHH
Confidence 321111222221 35689999999999999999973 33321 122222345788875 7777766554
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.011 Score=62.47 Aligned_cols=45 Identities=27% Similarity=0.341 Sum_probs=35.5
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHH
Q 003452 530 FDKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEV 575 (819)
Q Consensus 530 ~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ 575 (819)
..|...|+.|+++ + +.|.++||+.||.+||..++-||.+| ++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 4689999988876 2 35667899999999999999999999 66665
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.042 Score=55.43 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=33.7
Q ss_pred cHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCC
Q 003452 453 GVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGIL 489 (819)
Q Consensus 453 ~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~ 489 (819)
.+.+.+.+|+++|+.|+.+|.-....-...-+++|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999988888899999987
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.011 Score=57.74 Aligned_cols=105 Identities=15% Similarity=0.091 Sum_probs=73.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcC----CCCCCCCCC-ccceecccccccCCHHHHHHHhhhhce
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECG----ILKPGQDTS-TGAVLEGEEFRNYTHEERMEKVDKICV 523 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~G----I~~~~~~~~-~~~vi~g~~~~~~~~~~~~~~~~~~~v 523 (819)
.++|+-++.++.+++.++.++++|+--..-...+-+.++ |..-+...+ .....+|.-.- +
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i---------------~ 137 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSI---------------K 137 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceee---------------e
Confidence 589999999999999999999999987777777766655 221110000 01112222111 1
Q ss_pred eccCC--HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceee
Q 003452 524 MARSS--PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSM 568 (819)
Q Consensus 524 ~ar~s--P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIam 568 (819)
....+ -.+|...|+.+++..+.+.|+|||+.|..|-+.+|+=+|=
T Consensus 138 ~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 138 YTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred cCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 11112 2489999999999999999999999999998888887753
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.032 Score=55.91 Aligned_cols=128 Identities=15% Similarity=0.145 Sum_probs=71.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCCccceecccccccCCHHH
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNV---------------FTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEE 513 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~---------------~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~ 513 (819)
.+.||+.+++++|++.|+++.++|..+. .....+-+..|+... .++....... ++
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~-------~i~~~~~~~~---~~ 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD-------GIYYCPHHPE---DG 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc-------eEEECCCCCC---CC
Confidence 3579999999999999999999998762 112223334554211 0110000000 00
Q ss_pred HHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCC-CChH---HHHhhc--CEEEeCC
Q 003452 514 RMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGI-QGTE---VAKESS--DIVILDD 587 (819)
Q Consensus 514 ~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~-~gt~---~ak~aa--Divl~dd 587 (819)
.-..+-.|+--....+.+.-..+.+.|+||..+|..+-+.|++. +++. .|.. .....+ |.++.
T Consensus 99 --------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~-~i~v~~g~~~~~~~~~~~~~~~ii~-- 167 (181)
T PRK08942 99 --------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT-PVLVRTGKGVTTLAEGAAPGTWVLD-- 167 (181)
T ss_pred --------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe-EEEEcCCCCchhhhcccCCCceeec--
Confidence 00112233333444444444456799999999999999999974 2221 2221 122235 77764
Q ss_pred ChhHHHHHHH
Q 003452 588 NFASVARVLR 597 (819)
Q Consensus 588 ~f~~i~~~i~ 597 (819)
++..+.+++.
T Consensus 168 ~l~el~~~l~ 177 (181)
T PRK08942 168 SLADLPQALK 177 (181)
T ss_pred CHHHHHHHHH
Confidence 6766666543
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.012 Score=61.22 Aligned_cols=108 Identities=25% Similarity=0.394 Sum_probs=71.7
Q ss_pred CCCccHHHHHHHH--HhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCC-Cccceeccc-ccc--cCCHHHHHHHhhhhc
Q 003452 449 PCRPGVKKAVEDC--QYAGVNIKMITGDNVFTAKAIATECGILKPGQDT-STGAVLEGE-EFR--NYTHEERMEKVDKIC 522 (819)
Q Consensus 449 ~lr~~v~~aI~~l--~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~-~~~~vi~g~-~~~--~~~~~~~~~~~~~~~ 522 (819)
|+.|+.+++++.| ++.|+.+.++|--|..--..+-+.-|+....... .+....++. .++ .+.. +
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~----------h 140 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHS----------H 140 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccC----------C
Confidence 6789999999999 5689999999999999999999999987532110 000111110 111 1110 1
Q ss_pred eeccCCH-hhHHHHHHHHHhC----C---CEEEEEcCCCCC-HHHhh--hCCcce
Q 003452 523 VMARSSP-FDKLLMVQCLKQK----G---HVVAVTRDGTND-APALK--ETDIGL 566 (819)
Q Consensus 523 v~ar~sP-~~K~~iV~~L~~~----g---~~Va~~GDG~ND-~~aL~--~AdvGI 566 (819)
-+.++.| .=|..+++.+++. | ..|.++|||.|| +|+++ .+|+-.
T Consensus 141 ~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 141 GCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred CCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 2345555 4799999988765 4 789999999999 45543 455443
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.018 Score=58.54 Aligned_cols=96 Identities=18% Similarity=0.233 Sum_probs=65.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+++++|++.|+++.++|+-+...+..+.+.+|+...- ..++...+.. ..+-.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f-----d~i~~s~~~~----------------~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF-----DAVLSADAVR----------------AYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh-----heeEehhhcC----------------CCCCC
Confidence 57899999999999999999999999999999999999985421 1222222111 01112
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
|+-=..+.+.+.-.-+.+.++||+.+|+.+-+.|++-
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 2211223333333346688999999999998888875
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.038 Score=61.74 Aligned_cols=121 Identities=12% Similarity=0.094 Sum_probs=81.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.+.++.|+++|+++.++|+.+...+..+-+..||... ...++.+.+.. ...-.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y-----Fd~Iv~sddv~----------------~~KP~ 274 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF-----FSVIVAAEDVY----------------RGKPD 274 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH-----ceEEEecCcCC----------------CCCCC
Confidence 5789999999999999999999999999999999999998753 12333333321 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHH-HhhcCEEEeCCChhHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVA-KESSDIVILDDNFASV 592 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~a-k~aaDivl~dd~f~~i 592 (819)
|+-=...++.+.-..+.+.|+||..+|+.|-+.|++-...-..+.... ...+|+++. ++..+
T Consensus 275 Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~--s~~EL 337 (381)
T PLN02575 275 PEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVR--RLDEL 337 (381)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEEC--CHHHH
Confidence 333333444444445779999999999999999998533221222222 234787765 55544
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.022 Score=69.76 Aligned_cols=61 Identities=21% Similarity=0.272 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHhC--CCEEEEEcCCCCCHHHhhhC---CcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 530 FDKLLMVQCLKQK--GHVVAVTRDGTNDAPALKET---DIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 530 ~~K~~iV~~L~~~--g~~Va~~GDG~ND~~aL~~A---dvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
.+|...++.+.+. ...|+++||+.||.+|++.+ ..+++|| ++ +.+|++.+.+. ..+.++++
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCCH--HHHHHHHH
Confidence 4788888888764 35799999999999999986 6899998 43 56788888743 44555443
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.012 Score=58.88 Aligned_cols=94 Identities=16% Similarity=0.239 Sum_probs=60.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.++++.|+++|+++.++|+... +..+.+..|+... ...++.+.+.. ..+-.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~-----f~~~~~~~~~~----------------~~kp~ 143 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDY-----FDAIVDPAEIK----------------KGKPD 143 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhh-----CcEEEehhhcC----------------CCCCC
Confidence 6789999999999999999999997532 4566778887643 12223222211 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
|+-=....+.+.-..+.+.|+||..+|+.+-+.|++-
T Consensus 144 p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 144 PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 2221222333322235688999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.019 Score=59.23 Aligned_cols=96 Identities=18% Similarity=0.166 Sum_probs=66.1
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.++++.|++.|+++.++|+-+...+....+.+|+...- ..++.+.+.. ..+-.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~----------------~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF-----DAVITSEEEG----------------VEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc-----cEEEEeccCC----------------CCCCC
Confidence 68899999999999999999999999888888888889986431 1222222211 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhhhCCcc
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALKETDIG 565 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~AdvG 565 (819)
|+-=..+.+.+.-..+.+.|+||.. +|+.+=+.|++-
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCE
Confidence 2222223333332345789999998 999999999874
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.026 Score=56.11 Aligned_cols=94 Identities=18% Similarity=0.191 Sum_probs=63.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+... ...++.+.+.. ..+-.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~-----f~~i~~~~~~~----------------~~KP~ 142 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL-----FDVVIFSGDVG----------------RGKPD 142 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH-----CCEEEEcCCCC----------------CCCCC
Confidence 688999999999999999999999988877 556556888642 11222222211 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI 564 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv 564 (819)
|+-=..+.+.+.-....+.++||...|+.+-+++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 143 PDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 333333444444345678999999999988888876
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.037 Score=52.28 Aligned_cols=92 Identities=15% Similarity=0.090 Sum_probs=63.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCC--------HHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhh
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDN--------VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDK 520 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~--------~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~ 520 (819)
++.|++.++++.|+++|+++.++|+.. ......+.+.+|+... .....+ .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~-~--------------- 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID------VLYACP-H--------------- 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE------EEEECC-C---------------
Confidence 578999999999999999999999998 7788888888888531 111111 0
Q ss_pred hceeccCCHhhHHHHHHHHH-hCCCEEEEEcC-CCCCHHHhhhCCcc
Q 003452 521 ICVMARSSPFDKLLMVQCLK-QKGHVVAVTRD-GTNDAPALKETDIG 565 (819)
Q Consensus 521 ~~v~ar~sP~~K~~iV~~L~-~~g~~Va~~GD-G~ND~~aL~~AdvG 565 (819)
..+-.|+-=..+.+.++ -..+.+.|+|| -.+|..+-+.+++-
T Consensus 83 ---~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 ---CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ---CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 01122222233444442 34467999999 58999998888763
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.038 Score=57.02 Aligned_cols=122 Identities=11% Similarity=0.050 Sum_probs=75.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.+++|++. +++.++|+-....+..+.++.|+...- ..++...+.. ..+-.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f-----d~i~~~~~~~----------------~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF-----DDIFVSEDAG----------------IQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc-----CEEEEcCccC----------------CCCCC
Confidence 5789999999999999 999999999999999999999986531 1222222111 01122
Q ss_pred HhhHHHHHHHH-HhCCCEEEEEcCCC-CCHHHhhhCCcce-eeCC-CChHHHHhhcCEEEeCCChhHHHH
Q 003452 529 PFDKLLMVQCL-KQKGHVVAVTRDGT-NDAPALKETDIGL-SMGI-QGTEVAKESSDIVILDDNFASVAR 594 (819)
Q Consensus 529 P~~K~~iV~~L-~~~g~~Va~~GDG~-ND~~aL~~AdvGI-amg~-~gt~~ak~aaDivl~dd~f~~i~~ 594 (819)
|+-=...++.+ .-.-+.+.|+||.. +|..+=+.+++-. .... ..++.....+|.++. ++..+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~ 222 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR--SLEELYE 222 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC--CHHHHHh
Confidence 22222333333 22235689999998 8999999999632 2221 122122234566654 5655544
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.028 Score=61.18 Aligned_cols=108 Identities=14% Similarity=-0.027 Sum_probs=75.6
Q ss_pred EeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC-CCCCCCccceecccccccCCHHHHHHHhhhhce
Q 003452 445 GIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILK-PGQDTSTGAVLEGEEFRNYTHEERMEKVDKICV 523 (819)
Q Consensus 445 ~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~-~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v 523 (819)
...+++.|++.++++.|++.|+++.++||....++..+.+.+|+.. .- ..+.|.+.. ..+ +... -
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f------~~i~~~~~~----~~~---~~~~-~ 248 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF------DDLIGRPPD----MHF---QREQ-G 248 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch------hhhhCCcch----hhh---cccC-C
Confidence 3578999999999999999999999999999999999999998864 21 011111100 000 0000 0
Q ss_pred eccCCHhhHHHHHHHHHh-CCCEEEEEcCCCCCHHHhhhCCcce
Q 003452 524 MARSSPFDKLLMVQCLKQ-KGHVVAVTRDGTNDAPALKETDIGL 566 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~-~g~~Va~~GDG~ND~~aL~~AdvGI 566 (819)
-.+-.|+-+...++.+-. .-+.+.|+||..+|+.+-+.|++-.
T Consensus 249 ~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 249 DKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 124456667766666533 2367999999999999999999864
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.031 Score=58.17 Aligned_cols=98 Identities=11% Similarity=0.009 Sum_probs=66.6
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-++.||+.+.++.|++.|+++.++|+-+...+...-+..|+...- ..++.+.+... .+-
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----d~iv~s~~~~~----------------~KP 150 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL-----DLLLSTHTFGY----------------PKE 150 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC-----CEEEEeeeCCC----------------CCC
Confidence 367899999999999999999999999888888887888876421 12222222110 111
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcce
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGL 566 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGI 566 (819)
.|+-=..+.+.+.-..+.+.|+||..+|+.+=+.|++..
T Consensus 151 ~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 151 DQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 222112222333323456899999999999999999963
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.023 Score=56.82 Aligned_cols=95 Identities=16% Similarity=0.229 Sum_probs=61.7
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-++.||+.+.++.|++.|+++.++|+. ..+..+-+.+|+...- ..++.+.+.. ..+-
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f-----~~v~~~~~~~----------------~~kp 143 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF-----DAIVDADEVK----------------EGKP 143 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC-----CEeeehhhCC----------------CCCC
Confidence 478999999999999999999999987 6677778888886421 1122211110 0111
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
.|+-=....+.+.-..+.+.|+||..+|..+=+.|++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 22111222233322235688999999999999988874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.03 Score=55.88 Aligned_cols=97 Identities=13% Similarity=-0.047 Sum_probs=58.4
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHH--------HHHHHHHHcCCCCCCCCCCcccee-cccccccCCHHHHHHHhhh
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVF--------TAKAIATECGILKPGQDTSTGAVL-EGEEFRNYTHEERMEKVDK 520 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~--------ta~~iA~~~GI~~~~~~~~~~~vi-~g~~~~~~~~~~~~~~~~~ 520 (819)
+.|++++++++|++.|+++.++|+.... .+....+..|+...- .... .+++..
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~-----~~~~~~~~~~~------------- 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIY-----LCPHKHGDGCE------------- 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEE-----ECcCCCCCCCC-------------
Confidence 6799999999999999999999987631 223333445553210 0000 000000
Q ss_pred hceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCccee
Q 003452 521 ICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS 567 (819)
Q Consensus 521 ~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIa 567 (819)
..+-.|+-=...++.+.-.-+.+.|+||..+|..+=++|++-..
T Consensus 91 ---~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 91 ---CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred ---CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 11222333233444443334669999999999999999988544
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.02 Score=56.02 Aligned_cols=98 Identities=15% Similarity=0.194 Sum_probs=69.0
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
..++.|++.+.++.|++.|+++.++|+.+........+..|+.... ..++...+.. ..+
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f-----~~i~~~~~~~----------------~~K 133 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF-----DEIISSDDVG----------------SRK 133 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC-----SEEEEGGGSS----------------SST
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc-----ccccccchhh----------------hhh
Confidence 3467899999999999999999999999999999999999987321 1222222211 011
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
-.|+-=..+++.+.-..+.+.++||+.+|..+-++|++-
T Consensus 134 p~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 134 PDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp TSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred hHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 122222334444443456799999999999999988764
|
... |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.066 Score=53.37 Aligned_cols=107 Identities=11% Similarity=0.046 Sum_probs=70.3
Q ss_pred EEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCC-CHHHHHHHHHHcCCCCCCCCC----CccceecccccccCCHHHH
Q 003452 440 LLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGD-NVFTAKAIATECGILKPGQDT----STGAVLEGEEFRNYTHEER 514 (819)
Q Consensus 440 ~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD-~~~ta~~iA~~~GI~~~~~~~----~~~~vi~g~~~~~~~~~~~ 514 (819)
.....+-+-++.||+.+.++.|+++|+++.++|+- ....+..+-..+|+....... ....+
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~i-------------- 101 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDR-------------- 101 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceee--------------
Confidence 34444445578899999999999999999999975 889999999999985211000 00111
Q ss_pred HHHhhhhceeccCCHhhH--HHHHHHHHhC------CCEEEEEcCCCCCHHHhhhCCcceee
Q 003452 515 MEKVDKICVMARSSPFDK--LLMVQCLKQK------GHVVAVTRDGTNDAPALKETDIGLSM 568 (819)
Q Consensus 515 ~~~~~~~~v~ar~sP~~K--~~iV~~L~~~------g~~Va~~GDG~ND~~aL~~AdvGIam 568 (819)
+.+...+..| ..+.+.+.+. -+.+.|+||...|+.+-++|++-...
T Consensus 102 --------v~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 102 --------IEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred --------eeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 1111111112 2234444322 35799999999999999999886544
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.072 Score=55.14 Aligned_cols=124 Identities=12% Similarity=0.095 Sum_probs=76.0
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.++++.|+ +|+++.++|......+...-+..|+...- ..++.+.+.. ...-.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----d~v~~~~~~~----------------~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF-----DLLVISEQVG----------------VAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc-----CEEEEECccC----------------CCCCC
Confidence 47899999999999 68999999999888888888888886421 1222222110 01112
Q ss_pred HhhHHHHHHHHHhC-CCEEEEEcCCC-CCHHHhhhCCcc-eeeCCCChH-HHHhhcCEEEeCCChhHHHHHH
Q 003452 529 PFDKLLMVQCLKQK-GHVVAVTRDGT-NDAPALKETDIG-LSMGIQGTE-VAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 529 P~~K~~iV~~L~~~-g~~Va~~GDG~-ND~~aL~~AdvG-Iamg~~gt~-~ak~aaDivl~dd~f~~i~~~i 596 (819)
|+-=..+++.+.-. .+.+.|+||.. +|+.+=+.|++- +.+...+.. .....+|+++. ++..+..++
T Consensus 153 p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 222 (224)
T PRK09449 153 VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLL 222 (224)
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHH
Confidence 22212233333211 25699999998 699999999985 333211211 11124677764 677666554
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.052 Score=61.24 Aligned_cols=116 Identities=17% Similarity=0.139 Sum_probs=73.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHH-HcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIAT-ECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~-~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
++.||+.+.++.|++.|+++.++|+.....+....+ ..|+... ...++.+++.. ..+-
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~-----Fd~ii~~d~v~----------------~~KP 151 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES-----FSVIVGGDEVE----------------KGKP 151 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh-----CCEEEehhhcC----------------CCCC
Confidence 578999999999999999999999998888877655 5777542 12233332211 1122
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCCh--HHHHhhcCEEEe
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGT--EVAKESSDIVIL 585 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt--~~ak~aaDivl~ 585 (819)
.|+-=...++.+.-..+.+.|+||+.+|+.+-+.|++....-..+. +.....+|.++.
T Consensus 152 ~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~ 211 (382)
T PLN02940 152 SPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVIN 211 (382)
T ss_pred CHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeC
Confidence 2332233334443335679999999999999999998633221221 223334666554
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.082 Score=57.24 Aligned_cols=118 Identities=18% Similarity=0.174 Sum_probs=73.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.+.++.|++.|+++.++|+-+......+-+..+...... .-.++.+.+.. ..+-.
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~---~~~~v~~~~~~----------------~~KP~ 204 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQ---GLDVFAGDDVP----------------KKKPD 204 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccC---ceEEEeccccC----------------CCCCC
Confidence 688999999999999999999999998888877766553221100 00112222211 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCCh--HHHHhhcCEEEe
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGT--EVAKESSDIVIL 585 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt--~~ak~aaDivl~ 585 (819)
|+-=..+.+.+.-..+.+.|+||+.+|..|-++|++.......|. ......+|+++.
T Consensus 205 p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 205 PDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred HHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 333233444444344669999999999999999998655432322 111235788764
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.72 E-value=0.13 Score=54.81 Aligned_cols=86 Identities=12% Similarity=0.076 Sum_probs=59.7
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHH---HHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhce
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVF---TAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICV 523 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~---ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v 523 (819)
..++-|++.+.++.+++.|+++.++|+.... .+...-+..|+..... .. +
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~---d~------------------------l 168 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE---EH------------------------L 168 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc---ce------------------------E
Confidence 5567899999999999999999999997743 3345556788864211 11 2
Q ss_pred eccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHh
Q 003452 524 MARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPAL 559 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL 559 (819)
+.|-....|..-.+.+.+.-.+++++||-.+|....
T Consensus 169 llr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 169 LLKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred EeCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 333222345555566666567799999999998543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.089 Score=52.28 Aligned_cols=87 Identities=16% Similarity=0.120 Sum_probs=60.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCC-HHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDN-VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~-~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
.+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.... + ...-
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~----------~--------------------~~KP 92 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP----------H--------------------AVKP 92 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc----------C--------------------CCCC
Confidence 567999999999999999999999988 67778888888864210 0 0111
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhhhCCcc
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALKETDIG 565 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~AdvG 565 (819)
.|+-=..+.+.+.-..+.+.|+||.. .|..+=+.|++-
T Consensus 93 ~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 93 PGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred ChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 22211222222222345699999998 799999999873
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.15 Score=50.96 Aligned_cols=27 Identities=19% Similarity=0.281 Sum_probs=24.3
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCH
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNV 476 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~ 476 (819)
+.|++.+++++|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 568999999999999999999997653
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.37 E-value=0.12 Score=50.01 Aligned_cols=94 Identities=17% Similarity=0.191 Sum_probs=58.1
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCCccceecc---cccccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNV---------------FTAKAIATECGILKPGQDTSTGAVLEG---EEFRNYT 510 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~---------------~ta~~iA~~~GI~~~~~~~~~~~vi~g---~~~~~~~ 510 (819)
++.|++.++++.|++.|+++.++|..+. ..+..+.+.+|+.... ..... .+.
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~~~~~~---- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG------VLFCPHHPADN---- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE------EEECCCCCCCC----
Confidence 3689999999999999999999998762 4556677788875210 00000 000
Q ss_pred HHHHHHHhhhhceeccCCHhh--HHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 511 HEERMEKVDKICVMARSSPFD--KLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 511 ~~~~~~~~~~~~v~ar~sP~~--K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
... ..|+- =..+++.+.-.-+.+.|+||...|..+-+.+++-
T Consensus 97 ------------~~~-~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 ------------CSC-RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ------------CCC-CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 000 12211 1122222222235699999999999988888774
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.12 Score=52.52 Aligned_cols=94 Identities=14% Similarity=0.092 Sum_probs=58.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
.+-|++.++++.|++.|+++.++|+-... .....+.+|+...- ..++...+.. ..+-+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f-----d~i~~s~~~~----------------~~KP~ 162 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF-----DFVVTSYEVG----------------AEKPD 162 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc-----ceEEeecccC----------------CCCCC
Confidence 57799999999999999999999986554 46677778875421 1122111110 01112
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhhhCCc
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALKETDI 564 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~Adv 564 (819)
|+-=..+++.+.-..+.+.|+||+. +|+.+=++|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 163 PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 2211222233322346799999997 89988888765
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.41 Score=50.40 Aligned_cols=49 Identities=12% Similarity=0.135 Sum_probs=37.8
Q ss_pred EEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHH--HHHHHcCCCC
Q 003452 442 GLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAK--AIATECGILK 490 (819)
Q Consensus 442 G~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~--~iA~~~GI~~ 490 (819)
|.+.-.+.+-|++.+++++|+++|+++.++|.-....+. ...+++|+..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~ 67 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINA 67 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCc
Confidence 334445678899999999999999999999986554443 5567888864
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.14 Score=49.49 Aligned_cols=93 Identities=16% Similarity=0.183 Sum_probs=59.0
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
+.+..+++.+.++.|++.|+++.++|+-....+....+.. +.... ..++...+ +..+
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f-----~~i~~~~~-----------------~~~K 118 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF-----DLILGSDE-----------------FGAK 118 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC-----cEEEecCC-----------------CCCC
Confidence 4455689999999999999999999999999988887765 33211 11111111 1112
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCC
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETD 563 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Ad 563 (819)
-.|+-=..+.+.+.-.. .+.++||..+|..+-+.|+
T Consensus 119 p~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 119 PEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred cCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 22222222223332223 6899999999998877663
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=93.76 E-value=0.18 Score=52.14 Aligned_cols=98 Identities=17% Similarity=0.233 Sum_probs=59.5
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHH-HHHHcCCCCCCCCCCccceeccc--ccccCCHHHHHHHhhhhcee
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKA-IATECGILKPGQDTSTGAVLEGE--EFRNYTHEERMEKVDKICVM 524 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~-iA~~~GI~~~~~~~~~~~vi~g~--~~~~~~~~~~~~~~~~~~v~ 524 (819)
-++.||+.+.++.|++.|+++.++||-....... ..+..|+... ...++.+. +.. .
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~-----f~~i~~~~~~~~~----------------~ 135 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL-----MHHVVTGDDPEVK----------------Q 135 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh-----CCEEEECChhhcc----------------C
Confidence 3578999999999999999999999987654432 2222233221 11122222 110 0
Q ss_pred ccCCHhhHHHHHHHHH---hCCCEEEEEcCCCCCHHHhhhCCcce
Q 003452 525 ARSSPFDKLLMVQCLK---QKGHVVAVTRDGTNDAPALKETDIGL 566 (819)
Q Consensus 525 ar~sP~~K~~iV~~L~---~~g~~Va~~GDG~ND~~aL~~AdvGI 566 (819)
.+-.|+-=...++.+. -..+.+.|+||...|+.|-+.|++-.
T Consensus 136 ~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 136 GKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred CCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 1122322233334442 22367999999999999999999854
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.32 Score=50.53 Aligned_cols=88 Identities=17% Similarity=0.104 Sum_probs=57.9
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHH---HHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhce
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFT---AKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICV 523 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~t---a~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v 523 (819)
+-|.-|++.++++.+++.|++|+++||+.... +..--++.|+... ..+++.+.+-.
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-----~~LiLR~~~d~---------------- 176 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-----KHLILRGLEDS---------------- 176 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-----CeeeecCCCCC----------------
Confidence 44888999999999999999999999999755 3233345676531 12333321100
Q ss_pred eccCCHhhHHHHHHHHHhCCC-EEEEEcCCCCCH
Q 003452 524 MARSSPFDKLLMVQCLKQKGH-VVAVTRDGTNDA 556 (819)
Q Consensus 524 ~ar~sP~~K~~iV~~L~~~g~-~Va~~GDG~ND~ 556 (819)
....-+-|...-+.+.++|+ +++.+||-.+|.
T Consensus 177 -~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 177 -NKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred -CchHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 00111237777777777764 677899999886
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.15 Score=50.33 Aligned_cols=95 Identities=16% Similarity=0.036 Sum_probs=58.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCCCccceec----ccccccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGD---------------NVFTAKAIATECGILKPGQDTSTGAVLE----GEEFRNY 509 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD---------------~~~ta~~iA~~~GI~~~~~~~~~~~vi~----g~~~~~~ 509 (819)
++-|++.+++++|++.|+++.++|.- ....+..+.++.|+.-. ..++. ..+.
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd------~ii~~~~~~~~~~--- 99 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD------DVLICPHFPDDNC--- 99 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee------EEEECCCCCCCCC---
Confidence 45689999999999999999999974 24456667777777511 11111 0110
Q ss_pred CHHHHHHHhhhhceeccCCHh--hHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCccee
Q 003452 510 THEERMEKVDKICVMARSSPF--DKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS 567 (819)
Q Consensus 510 ~~~~~~~~~~~~~v~ar~sP~--~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIa 567 (819)
.. ..|. -=..+++.+.-..+.+.|+||+.+|..+-+.|++-..
T Consensus 100 --------------~~-~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 100 --------------DC-RKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred --------------CC-CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 01 1222 1112222222123568999999999999999988644
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.16 Score=56.38 Aligned_cols=98 Identities=20% Similarity=0.108 Sum_probs=59.7
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHH
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGD---------------NVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHE 512 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD---------------~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~ 512 (819)
-++.|++.+++++|+++|+++.++|+- ....+..+.+..|+... ...+...... +
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd------~i~i~~~~~s----d 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD------EVLICPHFPE----D 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee------eEEEeCCcCc----c
Confidence 367899999999999999999999983 23345566777776421 1111100000 0
Q ss_pred HHHHHhhhhceeccCCHhhHHHHHHHHHh----CCCEEEEEcCCCCCHHHhhhCCccee
Q 003452 513 ERMEKVDKICVMARSSPFDKLLMVQCLKQ----KGHVVAVTRDGTNDAPALKETDIGLS 567 (819)
Q Consensus 513 ~~~~~~~~~~v~ar~sP~~K~~iV~~L~~----~g~~Va~~GDG~ND~~aL~~AdvGIa 567 (819)
+ ..+| .| |..++..+.+ ..+.+.|+||+.+|..+=+.|++-..
T Consensus 99 ~---------~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 N---------CSCR-KP--KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred c---------CCCC-CC--CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 0 0111 22 2223332222 23679999999999999898888643
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=93.15 E-value=0.11 Score=50.39 Aligned_cols=94 Identities=17% Similarity=0.027 Sum_probs=64.9
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
.-++||++.+.++.|+ .++++.++|.-+...+..+-+.+|+...- ...++.+++.. +
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~----f~~i~~~~d~~------------------~ 99 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF----GYRRLFRDECV------------------F 99 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE----eeeEEECcccc------------------c
Confidence 3467999999999999 57999999999999999999999874310 12223332211 1
Q ss_pred CCHhhHHHHHHHHHh---CCCEEEEEcCCCCCHHHhhhCCccee
Q 003452 527 SSPFDKLLMVQCLKQ---KGHVVAVTRDGTNDAPALKETDIGLS 567 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~---~g~~Va~~GDG~ND~~aL~~AdvGIa 567 (819)
..|. +.+.++. .-+.+.|+||..+|..+-++|.|-|.
T Consensus 100 ~KP~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 100 VKGK----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred cCCe----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 1221 3333333 34679999999999998777765553
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=92.43 E-value=1.5 Score=46.60 Aligned_cols=49 Identities=22% Similarity=0.292 Sum_probs=37.3
Q ss_pred EEEEeeCC----CCccHHHHHHHHHhcCCcEEEEcCCCHHH---HHHHHHHcCCCC
Q 003452 442 GLVGIKDP----CRPGVKKAVEDCQYAGVNIKMITGDNVFT---AKAIATECGILK 490 (819)
Q Consensus 442 G~v~i~D~----lr~~v~~aI~~l~~aGI~v~mlTGD~~~t---a~~iA~~~GI~~ 490 (819)
|.+.-.+. +=|++.++|++|+++|++++++||.+..+ .....+++|+..
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 33444455 78899999999999999999999976655 455556678754
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.33 E-value=0.44 Score=46.46 Aligned_cols=82 Identities=15% Similarity=0.261 Sum_probs=60.9
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
..-|++++=+++++++|+++.++|.-++..+...++.+|+.. ++--..
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f--------------------------------i~~A~K 93 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF--------------------------------IYRAKK 93 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce--------------------------------eecccC
Confidence 456788899999999999999999999999999999999975 333333
Q ss_pred HhhHHHHHHHHHhC---CCEEEEEcCCC-CCHHHhhhCC
Q 003452 529 PFDKLLMVQCLKQK---GHVVAVTRDGT-NDAPALKETD 563 (819)
Q Consensus 529 P~~K~~iV~~L~~~---g~~Va~~GDG~-ND~~aL~~Ad 563 (819)
|.-+ .+-+++++. -+.|+|+||-. .|+-+=+.|+
T Consensus 94 P~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 94 PFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred ccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 4333 344555555 57899999975 4775544443
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=92.30 E-value=0.31 Score=46.00 Aligned_cols=39 Identities=5% Similarity=0.060 Sum_probs=34.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCC-CHHHHHHHHHHcC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGD-NVFTAKAIATECG 487 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD-~~~ta~~iA~~~G 487 (819)
++.|++.+.++.|+++|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777767666
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.29 E-value=0.17 Score=51.20 Aligned_cols=113 Identities=20% Similarity=0.293 Sum_probs=72.2
Q ss_pred CCCccHHHHHHHHHhcCC-cEEEEcCCCHHHHHHHHHHcCCCCC-------CC--CCCccceecccccccCCHHHHHHHh
Q 003452 449 PCRPGVKKAVEDCQYAGV-NIKMITGDNVFTAKAIATECGILKP-------GQ--DTSTGAVLEGEEFRNYTHEERMEKV 518 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI-~v~mlTGD~~~ta~~iA~~~GI~~~-------~~--~~~~~~vi~g~~~~~~~~~~~~~~~ 518 (819)
|+-|+..++|+.+++.|- .++++|--|..-...+-+..||..- .. +.++.+.+. .+..
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~-----pyH~------- 151 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVR-----PYHT------- 151 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEee-----cCCC-------
Confidence 667999999999999996 9999999998888888887777531 00 011111111 1110
Q ss_pred hhhceeccCCHh-hHHHHHHHHHhCC-------CEEEEEcCCCCC-HHHhhhCCcceeeCCCChHH
Q 003452 519 DKICVMARSSPF-DKLLMVQCLKQKG-------HVVAVTRDGTND-APALKETDIGLSMGIQGTEV 575 (819)
Q Consensus 519 ~~~~v~ar~sP~-~K~~iV~~L~~~g-------~~Va~~GDG~ND-~~aL~~AdvGIamg~~gt~~ 575 (819)
-.=+.+|.|. =|..++..++..+ +.+.++|||.|| ||+++...--+||-..|-..
T Consensus 152 --~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 152 --QHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred --CCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 0013333332 4777776665432 378999999999 77877777777776555443
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=92.17 E-value=0.48 Score=46.84 Aligned_cols=81 Identities=15% Similarity=0.091 Sum_probs=62.0
Q ss_pred eCCCCccHHHHHHHHHhcCCc--EEEEcCC-------CHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHH
Q 003452 447 KDPCRPGVKKAVEDCQYAGVN--IKMITGD-------NVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEK 517 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~--v~mlTGD-------~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~ 517 (819)
++.+-|+..+.+++|++.+.. |.++|-- +...|..+++.+||..-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 466788999999999999875 9999986 48899999999998630
Q ss_pred hhhhceeccCCHhhHHHHHHHHHhC-----CCEEEEEcCCC-CCHHH
Q 003452 518 VDKICVMARSSPFDKLLMVQCLKQK-----GHVVAVTRDGT-NDAPA 558 (819)
Q Consensus 518 ~~~~~v~ar~sP~~K~~iV~~L~~~-----g~~Va~~GDG~-ND~~a 558 (819)
.+....|.-..++.+.++.+ -+.++|+||-. .|+-+
T Consensus 111 -----~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~ 152 (168)
T PF09419_consen 111 -----RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM 152 (168)
T ss_pred -----EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHH
Confidence 13345676666788888765 56799999964 45544
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=92.15 E-value=0.63 Score=59.38 Aligned_cols=127 Identities=12% Similarity=0.226 Sum_probs=81.2
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
.+.||+.+.+++|+++|+++.++|+-....+..+-+..|+.... ...++.+.+.. ..+-.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~----Fd~iv~~~~~~----------------~~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM----FDAIVSADAFE----------------NLKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH----CCEEEECcccc----------------cCCCC
Confidence 46799999999999999999999999999999988999985210 12233333221 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc-eeeC--CCChHHHHhhcCEEEeCCChhH--HHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG-LSMG--IQGTEVAKESSDIVILDDNFAS--VARVLR 597 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG-Iamg--~~gt~~ak~aaDivl~dd~f~~--i~~~i~ 597 (819)
|+-=....+.+.-..+.+.|+||..+|+.+-+.|++- |.+. ....+.....+|+++. ++.. +.+++.
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~--~l~el~~~~~~~ 292 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRK--DIGNISLSDILT 292 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC--ChHHCCHHHHHh
Confidence 3222333444443456789999999999999999883 2222 1122344456777776 4444 444443
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=92.10 E-value=0.32 Score=50.48 Aligned_cols=100 Identities=14% Similarity=0.152 Sum_probs=65.6
Q ss_pred eeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcC---CCCCCCCCCccceecccccccCCHHHHHHHhhhhc
Q 003452 446 IKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECG---ILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKIC 522 (819)
Q Consensus 446 i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~G---I~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 522 (819)
++-++.||+.+++++|+++|+++.++|..+....+.+-+..+ +... +++ -|. ..
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~---------f~~-~fd-------------~~ 148 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY---------FSG-YFD-------------TT 148 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh---------cce-EEE-------------eC
Confidence 345799999999999999999999999988877776655542 2110 000 000 00
Q ss_pred eeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceee
Q 003452 523 VMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSM 568 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIam 568 (819)
+...-.|+-=..+.+.+.-..+.+.|+||...|+.|=++|++-...
T Consensus 149 ~g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 149 VGLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred cccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1222333333444444443346799999999999999999986543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.05 E-value=0.18 Score=53.21 Aligned_cols=68 Identities=18% Similarity=0.148 Sum_probs=49.4
Q ss_pred ccCCHhhHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhC--------CcceeeCCCChHHHHhhcCEEEeCCChhHH
Q 003452 525 ARSSPFDKLLMVQCLKQK----GHVVAVTRDGTNDAPALKET--------DIGLSMGIQGTEVAKESSDIVILDDNFASV 592 (819)
Q Consensus 525 ar~sP~~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~A--------dvGIamg~~gt~~ak~aaDivl~dd~f~~i 592 (819)
.+..+.+|...++.+.++ ...++|+||+.||.+|++.+ ..|++|+ .+ ..+..|++++. +...+
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~~v 235 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQQV 235 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHHHH
Confidence 344566898888877654 34789999999999999998 4788885 33 23566888876 56666
Q ss_pred HHHHH
Q 003452 593 ARVLR 597 (819)
Q Consensus 593 ~~~i~ 597 (819)
...+.
T Consensus 236 ~~~L~ 240 (244)
T TIGR00685 236 LEFLG 240 (244)
T ss_pred HHHHH
Confidence 55553
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=91.74 E-value=0.59 Score=46.26 Aligned_cols=40 Identities=13% Similarity=0.172 Sum_probs=32.3
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCH------------HHHHHHHHHcCCC
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNV------------FTAKAIATECGIL 489 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~------------~ta~~iA~~~GI~ 489 (819)
+-||+.++++.|+++|+++.++|.-+. ..+..+.+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 349999999999999999999997543 2456677888874
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=91.58 E-value=2.3 Score=50.38 Aligned_cols=52 Identities=21% Similarity=0.225 Sum_probs=38.3
Q ss_pred ccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcE---------EEEcCCCHHHHHHHHHHcCCC
Q 003452 435 EDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNI---------KMITGDNVFTAKAIATECGIL 489 (819)
Q Consensus 435 e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v---------~mlTGD~~~ta~~iA~~~GI~ 489 (819)
-.+.+++=.=.++--.|.++++.++.| |-+| .++-|++.-.=..=|+++||.
T Consensus 595 l~gkt~V~TGtL~~~sR~eak~~le~l---Gakv~~SVSkktD~vvaG~~aGSKl~kA~eLgv~ 655 (667)
T COG0272 595 LAGKTFVLTGTLEGMSRDEAKALLEAL---GAKVSGSVSKKTDYVVAGENAGSKLAKAQELGVK 655 (667)
T ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHc---CCEEeceecccccEEEEcCCCChHHHHHHHcCCe
Confidence 355666555456778899988888877 4333 577899988888889999975
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.42 E-value=0.26 Score=50.92 Aligned_cols=98 Identities=10% Similarity=0.092 Sum_probs=64.2
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-++.||+.+.++.| ++++.++|+.....+...-+..|+...- ...++.+.+.. ..+-
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F----~~~v~~~~~~~----------------~~KP 143 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF----PDKLFSGYDIQ----------------RWKP 143 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC----cceEeeHHhcC----------------CCCC
Confidence 35678999999998 4999999999988888888888886531 01233332211 0112
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceee
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSM 568 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIam 568 (819)
.|+-=....+.+.-..+.++|+||..+|..+=++|++....
T Consensus 144 ~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 144 DPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 22222233333332335689999999999999999987653
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=91.28 E-value=0.25 Score=50.58 Aligned_cols=97 Identities=18% Similarity=0.096 Sum_probs=56.5
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHH--HHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceec
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFT--AKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA 525 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~t--a~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a 525 (819)
-++.|++.+.++.|++.|+++.++|...... ........|+...- ..++...+. -..
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-----d~v~~s~~~----------------~~~ 151 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-----DAVVESCLE----------------GLR 151 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-----CEEEEeeec----------------CCC
Confidence 3678999999999999999999999865432 22222233432210 111111110 011
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 526 RSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 526 r~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
+-.|+-=..+.+.+.-..+.+.|+||...|+.+=++|++-
T Consensus 152 KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 152 KPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 2223222233333333345688899999999999998884
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=90.16 E-value=0.47 Score=52.24 Aligned_cols=91 Identities=9% Similarity=-0.031 Sum_probs=66.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH----cCCCCCCCCCCccceecccccccCCHHHHHHHhhhhcee
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE----CGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVM 524 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~----~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 524 (819)
++.+++.++++.|++.|+.+.++|.-+...|..+-+. +|+...- ..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f------------------------------~~ 80 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF------------------------------DA 80 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe------------------------------eE
Confidence 4578999999999999999999999999999998888 7765421 00
Q ss_pred ccCCHhhHHHHHHHHHh----CCCEEEEEcCCCCCHHHhhhCCcceeeC
Q 003452 525 ARSSPFDKLLMVQCLKQ----KGHVVAVTRDGTNDAPALKETDIGLSMG 569 (819)
Q Consensus 525 ar~sP~~K~~iV~~L~~----~g~~Va~~GDG~ND~~aL~~AdvGIamg 569 (819)
....+..|...++.+.+ .-..++|+||...|..+.+.+...+.+-
T Consensus 81 ~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 81 RSINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EEEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 01112334444433322 2467999999999999999988876544
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=89.76 E-value=2.3 Score=47.38 Aligned_cols=34 Identities=9% Similarity=0.113 Sum_probs=30.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIA 483 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA 483 (819)
.+-++..++|++|. .|+.+.++||+.......+.
T Consensus 133 ~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 133 FMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 36688999999999 78999999999999999873
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.58 E-value=0.71 Score=46.89 Aligned_cols=97 Identities=11% Similarity=0.103 Sum_probs=57.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH-cCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE-CGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~-~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
++.|++.++++.|++.|+++.++|.-+.......-.. .|+... ...++...+.. ...-
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-----fd~v~~s~~~~----------------~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-----ADHIYLSQDLG----------------MRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-----cCEEEEecccC----------------CCCC
Confidence 4789999999999999999999999776654433222 233221 01111111110 0111
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcce
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGL 566 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGI 566 (819)
.|+-=..+++.+.-..+.+.++||...|+.+=++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 222222333333333456899999999999888888853
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=89.53 E-value=1.9 Score=42.05 Aligned_cols=103 Identities=18% Similarity=0.192 Sum_probs=69.5
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHH---HHHc-----CCCCCCCCCCccceecccc-cccCCHHHHHHH
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAI---ATEC-----GILKPGQDTSTGAVLEGEE-FRNYTHEERMEK 517 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~i---A~~~-----GI~~~~~~~~~~~vi~g~~-~~~~~~~~~~~~ 517 (819)
+|-.++++.+..+..++.|++++.+|++..--|... -.+. +++. +.+.+.... +..+..|
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~------Gpv~~sP~~l~~al~rE----- 93 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD------GPVLLSPDSLFSALHRE----- 93 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC------CCEEECCcchhhhhhcc-----
Confidence 478999999999999999999999999986544332 2222 4433 223333221 1112111
Q ss_pred hhhhceeccCCHhhHHHHHHHHHhC-----CCEEEEEcCCCCCHHHhhhCCcc
Q 003452 518 VDKICVMARSSPFDKLLMVQCLKQK-----GHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 518 ~~~~~v~ar~sP~~K~~iV~~L~~~-----g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
+..+-.-+.|...++.++.. ...++..|...+|+.+-++++|-
T Consensus 94 -----vi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 94 -----VISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred -----ccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 44554556898888888864 45677778889999999887764
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.52 E-value=2.3 Score=43.00 Aligned_cols=53 Identities=21% Similarity=0.318 Sum_probs=44.0
Q ss_pred EEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH---cCCCCC
Q 003452 439 TLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE---CGILKP 491 (819)
Q Consensus 439 ~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~---~GI~~~ 491 (819)
.+-|.+-++|..-|++.+|++.|++++.+|+.+|.-..+.-+.+.++ ||+.-.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~ 68 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVS 68 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCcc
Confidence 35588999999999999999999999999999998877776666554 676543
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.35 E-value=2 Score=45.45 Aligned_cols=48 Identities=17% Similarity=0.272 Sum_probs=40.3
Q ss_pred EEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH---cCCC
Q 003452 442 GLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE---CGIL 489 (819)
Q Consensus 442 G~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~---~GI~ 489 (819)
|.+.-.+.+-|++.++++.|+++|++++++|+....+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44555667889999999999999999999999998888777776 5774
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=89.07 E-value=1.3 Score=55.00 Aligned_cols=51 Identities=10% Similarity=0.047 Sum_probs=37.7
Q ss_pred cCcEEEEEEEeeCCCCccHHHHHHHH-HhcCCcEEEEcCCCHHHHHHHHHHc
Q 003452 436 DNLTLLGLVGIKDPCRPGVKKAVEDC-QYAGVNIKMITGDNVFTAKAIATEC 486 (819)
Q Consensus 436 ~~l~~lG~v~i~D~lr~~v~~aI~~l-~~aGI~v~mlTGD~~~ta~~iA~~~ 486 (819)
-|.|++-.....-.+-++..+++++| ++.|+.|.++||+...+....-..+
T Consensus 603 yDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 603 YDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred cCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 45555533322335667899999996 7889999999999999998876543
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=88.37 E-value=3.6 Score=43.46 Aligned_cols=48 Identities=10% Similarity=0.046 Sum_probs=39.6
Q ss_pred EEeeCCCCccHHHHHHHHHhcCCcEEEEcC---CCHHHHHHHHHHcCCCCC
Q 003452 444 VGIKDPCRPGVKKAVEDCQYAGVNIKMITG---DNVFTAKAIATECGILKP 491 (819)
Q Consensus 444 v~i~D~lr~~v~~aI~~l~~aGI~v~mlTG---D~~~ta~~iA~~~GI~~~ 491 (819)
+.-.+.+-|++.++|++|++.|++++++|| ..........+++|+...
T Consensus 12 l~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 12 MYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred eEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 334456667999999999999999999996 778888888888998654
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=88.16 E-value=0.63 Score=51.00 Aligned_cols=49 Identities=14% Similarity=0.217 Sum_probs=38.7
Q ss_pred EEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHH---HHcCCCC
Q 003452 442 GLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIA---TECGILK 490 (819)
Q Consensus 442 G~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA---~~~GI~~ 490 (819)
|.+--.+.+=|++.++++.|++.|++++++|+....+...++ +++|+..
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 334444566799999999999999999999999977766666 5677753
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=87.81 E-value=0.79 Score=51.36 Aligned_cols=63 Identities=17% Similarity=0.225 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHhC-C-----C-EEEEEcCCCCCHHHhhh-----CCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 530 FDKLLMVQCLKQK-G-----H-VVAVTRDGTNDAPALKE-----TDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 530 ~~K~~iV~~L~~~-g-----~-~Va~~GDG~ND~~aL~~-----AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
-+|...|+.+.+. | . .++++||+.||..|++. +++||+|| ++.. ...|++.+. +-..+...++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~--~t~A~y~L~--dp~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPK--ESNAFYSLR--DPSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCC--CccceEEcC--CHHHHHHHHH
Confidence 3899999888665 2 1 25899999999999996 68999999 5543 225777776 5555555554
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.73 E-value=1.4 Score=43.91 Aligned_cols=93 Identities=16% Similarity=0.143 Sum_probs=61.2
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCH
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSP 529 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 529 (819)
+-|+ .+.++.+++. +++.++||.....+..+-+..|+... ...++...+.. ..+-.|
T Consensus 89 ~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~-----fd~i~~~~~~~----------------~~KP~p 145 (188)
T PRK10725 89 PLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRY-----FDAVVAADDVQ----------------HHKPAP 145 (188)
T ss_pred CccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhH-----ceEEEehhhcc----------------CCCCCh
Confidence 3454 6899999875 89999999999999999999998653 12233332221 112223
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 530 FDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 530 ~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
+-=....+.+.-..+.+.++||..+|+.+=+.|++-
T Consensus 146 ~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 146 DTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 222333333433334578899999999999998874
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=86.85 E-value=0.46 Score=42.02 Aligned_cols=20 Identities=35% Similarity=0.481 Sum_probs=17.4
Q ss_pred ceEEEecchHHHHHHhhhhc
Q 003452 360 TSHVHWKGAAEMILAMCSSY 379 (819)
Q Consensus 360 ~~~~~~KGa~e~il~~c~~~ 379 (819)
.+.+++|||||.|+++|+++
T Consensus 72 ~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 72 KYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred EEEEEcCCChHHHHHhcCCC
Confidence 46779999999999999863
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=86.31 E-value=1.9 Score=43.51 Aligned_cols=93 Identities=11% Similarity=0.041 Sum_probs=54.9
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.++++.|++.+ +..++|.-+..+....-+.+|+....... ...++. ++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~-f~~i~~----------------------~~~~ 129 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGA-FSEVLM----------------------CGHD 129 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCc-ccEEEE----------------------eccC
Confidence 47899999999999975 56677765554444455566664211000 011111 1111
Q ss_pred HhhHHHHHH-HHHhCC-CEEEEEcCCCCCHHHhhhC--Ccce
Q 003452 529 PFDKLLMVQ-CLKQKG-HVVAVTRDGTNDAPALKET--DIGL 566 (819)
Q Consensus 529 P~~K~~iV~-~L~~~g-~~Va~~GDG~ND~~aL~~A--dvGI 566 (819)
.. |..+++ .+++.| +.++|+||..+|+.+-++| ++-.
T Consensus 130 ~~-kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 130 ES-KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred cc-cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 11 223332 333334 4578999999999999999 8853
|
2 hypothetical protein; Provisional |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=86.25 E-value=1.8 Score=43.21 Aligned_cols=97 Identities=10% Similarity=0.026 Sum_probs=62.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.+++.+.+++|+ .++.++|.-+...+..+.+..|+...- ..++.+.+.... ...++-.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-----d~i~~~~~~~~~------------~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-----DGIFCFDTANPD------------YLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-----CeEEEeecccCc------------cCCCCCC
Confidence 47789999999997 479999999999999999999986421 122222221100 0001223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
|+-=..+++.+....+.+.|+||...|..+=+.|++.
T Consensus 144 p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 144 PQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred HHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 3322344444444456788999999999888888764
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=82.40 E-value=1.4e+02 Score=37.07 Aligned_cols=60 Identities=20% Similarity=0.259 Sum_probs=37.5
Q ss_pred ccCCEEEEecCCeeccceEEEe-ccceeEecccccCCCceeeecCCCC---Ce-EeeccccccceE
Q 003452 237 VVGDVICLKIGDQVPANGLFLD-GHSLQVDESSMTGESDHVEVNSSQN---PF-LFSGTKVADGYA 297 (819)
Q Consensus 237 vvGDiV~l~~Gd~VPaDg~ll~-g~~l~VDES~LTGES~pv~k~~~~~---~~-l~sGt~v~~G~~ 297 (819)
.-|....+..-+.+|-|-+++. |+.+-+|=-.+.|++. +.=..-.| |. -..|..|..|+.
T Consensus 249 r~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~~-vdes~lTGEs~Pv~k~~Gd~V~aGt~ 313 (741)
T PRK11033 249 RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFAS-FDESALTGESIPVERATGEKVPAGAT 313 (741)
T ss_pred ECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcEE-eecccccCCCCCEecCCCCeeccCCE
Confidence 4577888888899999988884 5566677777777642 22111011 21 245677777653
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=82.06 E-value=18 Score=42.38 Aligned_cols=121 Identities=13% Similarity=0.003 Sum_probs=70.6
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH-cCCCCC---CCCCCccceecccccccCCHHHHHHHhhhhceec
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE-CGILKP---GQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA 525 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~-~GI~~~---~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a 525 (819)
+++++.+. +++.|. ++++|+-...-++.+|++ +|++.- ..+....-.++|. +-.
T Consensus 111 l~~~a~~~---~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~------------------i~g 168 (497)
T PLN02177 111 VHPETWRV---FNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGF------------------MKK 168 (497)
T ss_pred cCHHHHHH---HHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeee------------------ecC
Confidence 56665554 456674 599999999999999988 898731 0000001111221 111
Q ss_pred --cCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChH-HH--HhhcCEEEeCCChhHH
Q 003452 526 --RSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTE-VA--KESSDIVILDDNFASV 592 (819)
Q Consensus 526 --r~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~-~a--k~aaDivl~dd~f~~i 592 (819)
.+.-++|.+-++..........+-||..||.|+|+.||-+.+++.+.-. .. +--..+|..|..+..-
T Consensus 169 ~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~~~~~~~~~~~~~~fhdgrl~~~ 240 (497)
T PLN02177 169 PGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPRTKCEPLPRNKLLSPVIFHEGRLVQR 240 (497)
T ss_pred CCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCCCCCCcCCcccCCCceeeeCCcccCC
Confidence 1344678777764332111124569999999999999999999842211 11 1133566666555443
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.55 E-value=3.7 Score=42.61 Aligned_cols=100 Identities=16% Similarity=0.198 Sum_probs=72.2
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
..++.||+.+.+++|++.|+.+.+.|+-....+..+.+..|+.... ..++++.+.. -.+
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f-----~~~v~~~dv~----------------~~K 142 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF-----DVIVTADDVA----------------RGK 142 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc-----chhccHHHHh----------------cCC
Confidence 3488999999999999999999999999999999999999998642 2333333321 112
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCccee
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS 567 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIa 567 (819)
-.|+-=..-.+.|.-....+.++.|..|.+.|-++|+.-+-
T Consensus 143 P~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 143 PAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred CCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 33443334444443344568888999999999999987543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 819 | ||||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-49 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 3e-49 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 3e-49 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 3e-49 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 2e-47 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 2e-47 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 1e-46 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-43 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 3e-18 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 3e-17 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 3e-14 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 4e-14 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 6e-14 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 1e-13 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 2e-13 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 4e-12 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 4e-12 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 4e-11 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 4e-07 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 2e-05 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 6e-04 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 6e-04 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 6e-04 | ||
| 1mo7_A | 213 | Atpase Length = 213 | 8e-04 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 8e-04 |
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|1MO7|A Chain A, Atpase Length = 213 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 819 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-129 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 3e-35 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-118 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 3e-37 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-118 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 2e-36 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-95 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 6e-31 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 4e-87 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 4e-31 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 7e-29 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 9e-27 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-26 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 9e-12 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 4e-26 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-25 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-11 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-24 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 7e-12 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 3e-18 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 1e-13 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 3e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 410 bits (1057), Expect = e-129
Identities = 132/477 (27%), Positives = 218/477 (45%), Gaps = 42/477 (8%)
Query: 366 KGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQ--GMASSSLRCIAFAHKQVPEEE 423
KGA E ++ C+ + KE+ +I+ G +LRC+A A + P +
Sbjct: 516 KGAPEGVIDRCNYVRVG-TTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKR 574
Query: 424 HRNEKD---QKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAK 480
D + E +LT +G+VG+ DP R V +++ C+ AG+ + MITGDN TA
Sbjct: 575 EEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAI 634
Query: 481 AIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLK 540
AI GI ++ G EF + E+ E + C AR P K +V+ L+
Sbjct: 635 AICRRIGIFGENEEV-ADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQ 693
Query: 541 QKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGR 600
+ A+T DG NDAPALK+ +IG++MG GT VAK +S++V+ DDNF+++ + GR
Sbjct: 694 SYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGR 752
Query: 601 CVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEK 660
++ N+++ I++ +++NV ++ F+ A L VQLLWVNL+ D L A AL
Sbjct: 753 AIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNP 812
Query: 661 PTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTL-------------------- 700
P ++MD+PP EPLI+ ++ +A Y A +
Sbjct: 813 PDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLT 872
Query: 701 ----------QFRGESIFGVNKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFE-GIHKN 749
F G T+ + V ++ N N+ E +++ N
Sbjct: 873 HFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLS-ENQSLMRMPPWVN 931
Query: 750 RLFLGIIGTTIVLQ--VVMVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCI 804
LG I ++ L ++ V+ L + L+ QW + + + ++K I
Sbjct: 932 IWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 988
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 3e-35
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 30/294 (10%)
Query: 104 VASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCA 163
+ G+ + R E + N KSL+ V++ +DL + ILL A
Sbjct: 13 CLAYFGVSETTGL--TPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAA 70
Query: 164 VLSLAFGIKEHGLKEG--WYEGGSILVAVFLVIAVSAGSNFTQNRQFDK----FSKVSNN 217
+S E G + + E IL+ + V Q R + +
Sbjct: 71 CISFVLAWFEEGEETITAFVEPFVILLILIANAIVG----VWQERNAENAIEALKEYEPE 126
Query: 218 IQIDVIRNGRR--QQISIFEIVVGDVICLKIGDQVPANG--LFLDGHSLQVDESSMTGES 273
V R R+ Q+I +IV GD++ + +GD+VPA+ L + +L+VD+S +TGES
Sbjct: 127 -MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGES 185
Query: 274 DHVE-----------VNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNS 322
V VN + LFSGT +A G A + + G++T G++ Q++
Sbjct: 186 VSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQ 245
Query: 323 EQTPLQARLNKLTSSTGKIGLAVAFLVLAV-LLKKTDNTSHVHW-KGAAEMILA 374
++TPLQ +L++ K+ + V + + D W +GA
Sbjct: 246 DKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKI 299
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 381 bits (981), Expect = e-118
Identities = 123/503 (24%), Positives = 221/503 (43%), Gaps = 66/503 (13%)
Query: 366 KGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEE-- 423
KGA E IL CS+ G + L ++ KE FQ + R + F H +PE++
Sbjct: 513 KGAPERILDRCSTILLN-GAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYN 571
Query: 424 --HRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKA 481
+ + D+ +L +GL+ + DP R V AV C+ AG+ + M+TGD+ TAKA
Sbjct: 572 EGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKA 631
Query: 482 IATECGILKPGQDT-------------------STGAVLEGEEFRNYTHEERMEKVDKI- 521
IA GI+ G +T + V+ G + ++ + E + +
Sbjct: 632 IAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHT 691
Query: 522 -CVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESS 580
V AR+SP KL++V+ +++G +VAVT DG ND+PALK+ DIG++MGI G++V+K+++
Sbjct: 692 EIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAA 751
Query: 581 DIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQ 640
D+++LDDNFAS+ + GR + N++K I + LT+N+ + V + +PL V
Sbjct: 752 DMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVT 811
Query: 641 LLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITN--IMWRNLVAQALYQRAVLL 698
+L ++L D + A++LA E+ ++M + P + N ++ + Q
Sbjct: 812 ILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGF 871
Query: 699 TLQFRGESIFG-----------------------------------VNKKVKETLIFNTF 723
F + G + + T F +
Sbjct: 872 FSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISI 931
Query: 724 VLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQ--VVMVEFLKNFADTERLNW 781
V+ Q + + + ++F+ KN++ + + L + L
Sbjct: 932 VVVQWADLIICK-TRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKP 990
Query: 782 GQWSACIGFAAASWPIGWLVKCI 804
W ++ + + + I
Sbjct: 991 SWWFCAFPYSLIIFLYDEMRRFI 1013
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 149 bits (379), Expect = 3e-37
Identities = 59/269 (21%), Positives = 111/269 (41%), Gaps = 18/269 (6%)
Query: 104 VASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCA 163
+ + TD G+ + N+ PP+ + L ++L A
Sbjct: 56 LHNKYGTDLTRGL--TNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGA 113
Query: 164 VLSLAFGIKEHGLKEGWYEGGSIL-VAVFLVIAVSAGSNFTQNRQFDK----FSKVSNNI 218
+L + ++ L V + V+ V+ ++ Q + + F +
Sbjct: 114 ILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQ- 172
Query: 219 QIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVE- 277
Q VIR+G + I+ +V GD++ +K GD++PA+ + H +VD SS+TGES+
Sbjct: 173 QALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTR 232
Query: 278 --VNSSQNPF-----LFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQAR 330
SS+NP F T +G AR + G T G++ + S +TP+
Sbjct: 233 SPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTPIAIE 292
Query: 331 LNKLTS--STGKIGLAVAFLVLAVLLKKT 357
+ + + L V+F +L+++L +
Sbjct: 293 IEHFIHIITGVAVFLGVSFFILSLILGYS 321
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 380 bits (979), Expect = e-118
Identities = 124/504 (24%), Positives = 215/504 (42%), Gaps = 67/504 (13%)
Query: 366 KGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEE-- 423
KGA E +L CSS G LD+ +E FQ + R + F + E++
Sbjct: 518 KGAPERVLERCSSILI-KGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYP 576
Query: 424 --HRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKA 481
+ + + L+ GLV + DP R V AV C+ AG+ + M+TGD+ TAKA
Sbjct: 577 PGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKA 636
Query: 482 IATECGILKPGQDT-------------------STGAVLEGEEFRNYTHEERMEKVDKI- 521
IA GI+ G +T + V+ G + ++ E +E +
Sbjct: 637 IAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHP 696
Query: 522 -CVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESS 580
V AR+SP KL++V+ ++ G +VAVT DG ND+PALK+ DIG++MGI G++ AK ++
Sbjct: 697 EMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAA 756
Query: 581 DIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQ 640
D+++LDDNFAS+ + GR + N++K I + LT N+ L + + +PL +
Sbjct: 757 DMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCIT 816
Query: 641 LLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITN--IMWRNLVAQALYQRAVLL 698
+L++ L D +++LA EK ++M P + N + + Q
Sbjct: 817 ILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGF 876
Query: 699 TLQFRGESIFGVNKKVKE-----------------------------------TLIFNTF 723
T F + G + T+ F +
Sbjct: 877 TDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISI 936
Query: 724 VLCQVFNEFNARKLEKKNVFE-GIHKNRLFLGIIGTTIVLQ--VVMVEFLKNFADTERLN 780
+CQ+ + + + + F+ G +NR+ + I + + + + N + +
Sbjct: 937 EMCQIADVLIRK-TRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIR 995
Query: 781 WGQWSACIGFAAASWPIGWLVKCI 804
+ W + F + + K
Sbjct: 996 FQWWLVPMPFGLLIFVYDEIRKLG 1019
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 2e-36
Identities = 58/269 (21%), Positives = 107/269 (39%), Gaps = 18/269 (6%)
Query: 104 VASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCA 163
+ +T G+ + A N + P + L ++ A
Sbjct: 61 LEQKYQTSATKGL--SASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAA 118
Query: 164 VLSLAFGIKEHGLKEGWYEGGSIL-VAVFLVIAVSAGSNFTQNRQFDK----FSKVSNNI 218
+ L + + + L +A+ V+ V+ + Q + F +
Sbjct: 119 AICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQ- 177
Query: 219 QIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVE- 277
Q VIR+G + QI+ ++VVGD++ +K GD+VPA+ L +VD SS+TGES+
Sbjct: 178 QATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTR 237
Query: 278 --VNSSQNPF-----LFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQAR 330
+ ++P F T +G A+ L + G T G++ S S +E+TP+
Sbjct: 238 SPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIE 297
Query: 331 LNKLTS--STGKIGLAVAFLVLAVLLKKT 357
+ + I F ++A+ + T
Sbjct: 298 IEHFVDIIAGLAILFGATFFIVAMCIGYT 326
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 317 bits (814), Expect = 1e-95
Identities = 84/461 (18%), Positives = 169/461 (36%), Gaps = 33/461 (7%)
Query: 350 LAVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSL 409
A+ H KGA E IL + ++ ++ II A L
Sbjct: 407 TALTYIDGSGNWHRVSKGAPEQILELAK-----------ASNDLSKKVLSIIDKYAERGL 455
Query: 410 RCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIK 469
R +A A + VPE+ + +GL+ + DP R + + GVN+K
Sbjct: 456 RSLAVARQVVPEKTKESP-------GAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVK 508
Query: 470 MITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSP 529
MITGD + K G+ + A+L + N E ++K A P
Sbjct: 509 MITGDQLAIGKETGRRLGMGTNMYPS--SALLGTHKDANLASIPVEELIEKADGFAGVFP 566
Query: 530 FDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNF 589
K +V+ L+++ H+V +T DG NDAPALK+ DIG+++ T+ A+ +SDIV+ +
Sbjct: 567 EHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGL 625
Query: 590 ASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMD 649
+ + + R + ++ + ++ + + + A+ E +A +L + ++ D
Sbjct: 626 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIAL-IWEFDFSAFMVLIIAILND 684
Query: 650 TLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFR------ 703
+ ++ ++ + P + + + + + +
Sbjct: 685 -GTIMTISKDRV--KPSPTPDSWKLKEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTF 741
Query: 704 GESIFGVNKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQ 763
G N ++ + F R + F L + + ++
Sbjct: 742 GVRSIRDNNHELMGAVYLQVSIISQALIFVTR--SRSWSFVERPGALLMIAFLIAQLIAT 799
Query: 764 VVMVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCI 804
++ V FA + WG ++ ++ + K
Sbjct: 800 LIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFA 840
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 6e-31
Identities = 48/256 (18%), Positives = 110/256 (42%), Gaps = 24/256 (9%)
Query: 104 VASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCA 163
V L+ + G+ Q+ R + F N ++ L F+ + + ++ A
Sbjct: 22 VFQQLKCSRE-GL--TTQEGEDRIQIFGPNKLEEKKESKLLKFL-GFMWNPLSWVMEMAA 77
Query: 164 VLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDK-----FSKVSNNI 218
++++A + + W + I+ + + ++ +F + + ++
Sbjct: 78 IMAIALANGDGRPPD-WQDFVGIICLLVI----NSTISFIEENNAGNAAAALMAGLAPKT 132
Query: 219 QIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEV 278
+ V+R+G+ + +V GD++ +K+GD +PA+ L+G L+VD+S++TGES V
Sbjct: 133 K--VLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTK 190
Query: 279 NSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSST 338
+ Q +FSG+ G + + G++T +G+ + ++ Q L +
Sbjct: 191 HPGQ--EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAI---- 243
Query: 339 GKIGLAVAFLVLAVLL 354
G + + V+
Sbjct: 244 GNF-CICSIAIGMVIE 258
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 295 bits (756), Expect = 4e-87
Identities = 81/470 (17%), Positives = 168/470 (35%), Gaps = 35/470 (7%)
Query: 350 LAVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSL 409
+ +++ KGA +L + + + ++ + A+
Sbjct: 458 VVAVVESPQGERITCVKGAPLFVLKTVE-------EDHPIPEEVDQAYKNKVAEFATRGF 510
Query: 410 RCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIK 469
R + A K+ E + +LG++ DP R K V + + G++IK
Sbjct: 511 RSLGVARKRG---------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIK 555
Query: 470 MITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSP 529
M+TGD V A+ + + G+ G + L + E + V+ A P
Sbjct: 556 MLTGDAVGIARETSRQLGL---GTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFP 612
Query: 530 FDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNF 589
K +V+ L+Q+G++VA+T DG NDAP+LK+ D G+++ ++ A+ ++DIV L
Sbjct: 613 QHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGL 671
Query: 590 ASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMD 649
++ L+ R + + + +++ ++ L I + L ++++ + D
Sbjct: 672 GAIIDALKTSRQIFHRMYAYVVYRIALSI-HLEIFLGLWIAILNRSLNIELVVFIAIFAD 730
Query: 650 TLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFG 709
+ LA+A + L + +V V
Sbjct: 731 -VATLAIAYDNAPYSQTPVKW--NLPKLWGMSVLLGVVLAVGTWITVTTMYAQGENGGIV 787
Query: 710 VNKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEF 769
N + ++F L + + F R + + G I +L +
Sbjct: 788 QNFGNMDEVLFLQISLTENWLIFITR--ANGPFWS-SIPSWQLSGAIFLVDILATCFTIW 844
Query: 770 LKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPVPAKPFSSYLKWKK 819
+ + + F+ + I V I + F + + K
Sbjct: 845 --GWFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDSVGFDNLMHGKS 892
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 4e-31
Identities = 70/311 (22%), Positives = 130/311 (41%), Gaps = 34/311 (10%)
Query: 57 KASRSPSYTVVNLQHDDESFKIDQTSLVELVKMKDL------DKLHEFGGIRGVA-SALE 109
KA+ + +Y DDE ID L+E ++ D ++ GG R V L+
Sbjct: 24 KAAEAAAYQPKPKVEDDEDEDIDA--LIEDLESHDGHDAEEEEEEATPGGGRVVPEDMLQ 81
Query: 110 TDFDAGIFGNDQDIARRHEAFSSN--TYKKPPSKSLFYFVVDALKDLTILILLGCAVLSL 167
TD G+ +++ +R + N +K F + ++ G AVL+
Sbjct: 82 TDTRVGL--TSEEVVQRRRKYGLNQMKEEKENHFLKF---LGFFVGPIQFVMEGAAVLAA 136
Query: 168 AFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFS---KVSNNIQIDVIR 224
W + G I + L +A F Q Q K + ++ V+R
Sbjct: 137 GLE--------DWVDFGVICGLLLL----NAVVGFVQEFQAGSIVDELKKTLALKAVVLR 184
Query: 225 NGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHS-LQVDESSMTGESDHVEVNSSQN 283
+G ++I E+V GD++ ++ G +PA+G + + LQVD+S++TGES V+ +
Sbjct: 185 DGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQ 244
Query: 284 PFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGL 343
+F+ + V G A ++ T+ G NT G+ + ++ + LN + + + +
Sbjct: 245 --VFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVI 302
Query: 344 AVAFLVLAVLL 354
+V
Sbjct: 303 FTLLIVWVSSF 313
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 7e-29
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 33/167 (19%)
Query: 440 LLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGA 499
+ I D RP +K +E + G+ I +++GD K ++ E I
Sbjct: 127 PIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI----------- 175
Query: 500 VLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPAL 559
+ + SP DK+ +++ LKQ G+ V + DG NDA AL
Sbjct: 176 -------------------QE--YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAAL 214
Query: 560 KETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNI 606
D+ ++MG G +++K +DI+++ ++ ++ +++ + + I
Sbjct: 215 ALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAI 260
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 9e-27
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 34/167 (20%)
Query: 440 LLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGA 499
+ G++ + D RP ++A+ + G+ M+TGDN F AK +A E G+
Sbjct: 135 VSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL----------- 183
Query: 500 VLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPAL 559
D A P +K V+ + Q+ +V A+ DG NDAPAL
Sbjct: 184 -------------------DD--YFAEVLPHEKAEKVKEV-QQKYVTAMVGDGVNDAPAL 221
Query: 560 KETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNI 606
+ D+G+++G GT+VA E++DIV++ ++ VA ++ R ++
Sbjct: 222 AQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKF 267
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 1e-26
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 33/167 (19%)
Query: 440 LLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGA 499
+ L+ ++DP + + + + Q +G+ I M+TGD+ TA+A+A GI
Sbjct: 545 TVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI----------- 593
Query: 500 VLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPAL 559
K V+A P DK +V LK KG +VA+ DG NDAPAL
Sbjct: 594 -------------------KK--VVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPAL 632
Query: 560 KETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNI 606
+ DIG++MG GT+VA ES+ + +L + +A+ R +NI
Sbjct: 633 AKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNI 678
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 9e-12
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 222 VIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSS 281
+ +G +++S+ + VGD++ ++ G+++P +G +G S VDES +TGE + V
Sbjct: 230 IKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF-VDESMVTGEP--IPVAKE 286
Query: 282 QNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQI 317
+ + T G M A VG +T M+++I
Sbjct: 287 ASAKVIGATINQTGSFVMKALHVGSDT----MLARI 318
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 4e-26
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 34/167 (20%)
Query: 440 LLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGA 499
+ G++ + D + K AV++ + G+ + MITGDN +A+AI+ E + D
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL-----DL---- 204
Query: 500 VLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPAL 559
V+A P K V+ L Q VVA DG NDAPAL
Sbjct: 205 -----------------------VIAEVLPHQKSEEVKKL-QAKEVVAFVGDGINDAPAL 240
Query: 560 KETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNI 606
+ D+G+++G G++VA ES DIV++ D+ V ++ R + I
Sbjct: 241 AQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 286
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 3e-25
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 34/167 (20%)
Query: 440 LLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGA 499
+ G++ + D + K AV++ + G+ + MITGDN +A+AI+ E +
Sbjct: 448 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 496
Query: 500 VLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPAL 559
D V+A P K V+ L Q VVA DG NDAPAL
Sbjct: 497 -------------------DL--VIAEVLPHQKSEEVKKL-QAKEVVAFVGDGINDAPAL 534
Query: 560 KETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNI 606
+ D+G+++G G++VA ES DIV++ D+ V ++ R + I
Sbjct: 535 AQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 580
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 66.0 bits (162), Expect = 2e-11
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 7/96 (7%)
Query: 222 VIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSS 281
VIR+G+ + + E+ VGD++ ++ G+++P +G+ ++G S VDES ++GE V V S
Sbjct: 137 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEP--VPVLKS 193
Query: 282 QNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQI 317
+ +F T G ++ AT VG T +++QI
Sbjct: 194 KGDEVFGATINNTGVLKIRATRVGGET----LLAQI 225
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 3e-24
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 34/167 (20%)
Query: 440 LLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGA 499
+ G++ + D + K AV++ + G+ + MITGDN +A+AI+ E +
Sbjct: 526 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 574
Query: 500 VLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPAL 559
D V+A P K V+ L Q VVA DG NDAPAL
Sbjct: 575 -------------------DL--VIAEVLPHQKSEEVKKL-QAKEVVAFVGDGINDAPAL 612
Query: 560 KETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNI 606
+ D+G+++G G++VA ES DIV++ D+ V ++ R + I
Sbjct: 613 AQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 658
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 67.9 bits (167), Expect = 7e-12
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 222 VIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSS 281
VIR+G+ + + E+ VGD++ ++ G+++P +G+ ++G S VDES ++GE V +
Sbjct: 215 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKG 273
Query: 282 QNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISR 319
+F T G ++ AT VG T +++QI +
Sbjct: 274 DE--VFGATINNTGVLKIRATRVGGET----LLAQIVK 305
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 82.2 bits (204), Expect = 3e-18
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Query: 350 LAVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSL 409
++V++ + + KGA + IL +CS G I LDD + +++ + L
Sbjct: 71 MSVVVAENTEHHQLVCKGALQEILNVCSQVRHN-GEIVPLDDIMLRKIKRVTDTLNRQGL 129
Query: 410 RCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDP 449
R +A A K +P E ++ E +L L G + D
Sbjct: 130 RVVAVATKYLPAREGDYQRA----DESDLILEGYIAFLDH 165
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 67.1 bits (165), Expect = 1e-13
Identities = 30/98 (30%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 222 VIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSS 281
VIR+G+ + + E+ VGD++ ++ G+++P +G+ ++G S VDES ++GE V +
Sbjct: 16 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKG 74
Query: 282 QNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISR 319
+F T G ++ AT VG T +++QI +
Sbjct: 75 DE--VFGATINNTGVLKIRATRVGGET----LLAQIVK 106
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 57.5 bits (140), Expect = 3e-10
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 222 VIRNGRR------QQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDH 275
++ +Q+ + + GD+I + G + P +G ++GHS VDES +TGE+
Sbjct: 22 IVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEA-- 78
Query: 276 VEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQI 317
+ V + +G+ +G + AT VG +T +SQI
Sbjct: 79 MPVAKKPGSTVIAGSINQNGSLLICATHVGADT----TLSQI 116
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.9 bits (139), Expect = 1e-08
Identities = 84/636 (13%), Positives = 171/636 (26%), Gaps = 237/636 (37%)
Query: 217 NIQIDVIRNGRRQQISIF-EIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDH 275
+ + + + +S+F + V + C + D + ++D + D
Sbjct: 8 DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMP--KSIL---SKEEIDH--IIMSKDA 60
Query: 276 VEVNSSQNPFLFSG--TKVADGYARMLATSVGMNTTWGQMMSQIS--------------- 318
V LF +K + + + + +N + +MS I
Sbjct: 61 VS----GTLRLFWTLLSKQEEMVQKFVEEVLRINYKF--LMSPIKTEQRQPSMMTRMYIE 114
Query: 319 ------RDNSEQTP-----------LQARLNKLTSST-----GKIGLAVAFLVLAVLLK- 355
DN L+ L +L + G +G ++ L V L
Sbjct: 115 QRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSY 174
Query: 356 --KTDNTSHVHW-----KGAAEMILAMCSSYY-----------DASGNIKYLDDNEKERF 397
+ + W + E +L M D S NIK + +
Sbjct: 175 KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL 234
Query: 398 QQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKA 457
+++++ + + N LL L + A
Sbjct: 235 RRLLK------------------SKPYEN------------CLLVL---LNVQNAKAWNA 261
Query: 458 VE-DCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERME 516
C+ I + T K + L T + T +E
Sbjct: 262 FNLSCK-----ILLTTRF-----KQVTD---FLSAAT---TTHISLDHHSMTLTPDEVKS 305
Query: 517 KVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAP--ALKETDIGLSMGIQGTE 574
L+++ L + D P L LS+
Sbjct: 306 -----------------LLLKYLDCR----------PQDLPREVLTTNPRRLSI------ 332
Query: 575 VAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQ-FQLTANV----------AALLI 623
+A+ + D A W H N KL + + NV L +
Sbjct: 333 IAES------IRDGLA------TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV 380
Query: 624 NFVAAVYAGEIPLTAVQLLWVNL-------IMDTLGALALATEKP---TKELMDKPPVGR 673
F + + IP + L+W ++ +++ L +L ++P T +
Sbjct: 381 -FPPSAH---IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS------ 430
Query: 674 TEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGVNKKV------KETLIFNTFVLCQ 727
+Y L+ + E+ + +++ + +T + +
Sbjct: 431 -----------------IYLE-----LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY 468
Query: 728 VFNEF---------NARKLEKKNVFEGIHKNRLFLG 754
+ F N E+ +F + + FL
Sbjct: 469 LDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLE 504
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 1e-06
Identities = 45/358 (12%), Positives = 98/358 (27%), Gaps = 115/358 (32%)
Query: 493 QDTSTGAVLEGEEFRN-YTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRD 551
QD ++L EE + ++ + ++ F L KQ+ V +
Sbjct: 39 QD-MPKSILSKEEIDHIIMSKDAVSGTLRL--------FWTL----LSKQEEMVQKFVEE 85
Query: 552 GTND-----APALKETDIGLSMGIQG--TEVAKESSDIVILDDNFASVARVLRWGRCVHT 604
+K SM + + + +D + V+R+ +
Sbjct: 86 VLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN--VSRL----QPYLK 139
Query: 605 NIQKLIQFQ-----------------LTANVA---ALLINFVAAVYAGEIPLTAVQLLWV 644
Q L++ + + +V + ++ W+
Sbjct: 140 LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF------------WL 187
Query: 645 NL--------IMDTLGALALATEKPTKELMD--KPPVGRTEPLITNIMWRNLVAQALYQR 694
NL +++ L L + D R + + R L+ Y+
Sbjct: 188 NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAEL--RRLLKSKPYEN 245
Query: 695 AVLLTLQFRGESIFGVNKKVKETLIFNTFVL-CQ---------VFNEFNA---RKLEKKN 741
LL L V+ +N F L C+ V + +A + +
Sbjct: 246 C-LLVL-----------LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDH 293
Query: 742 VFEGIHKN---RLFLGIIGTTIV-----------LQVVMV-EFLKNFADTERLNWGQW 784
+ + L L + ++ ++ E +++ T W W
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT----WDNW 347
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 3e-04
Identities = 53/418 (12%), Positives = 117/418 (27%), Gaps = 126/418 (30%)
Query: 69 LQHDDESFKID------QTSLVELVKMKDLDKLHE-----------FGGIRG-------- 103
L +++F + Q ++ +++D + F +
Sbjct: 22 LSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQK 81
Query: 104 -VASALETDFD---AGIFGNDQDIARRHEAFSS---NTYKKPPSKSLF--YFV-----VD 149
V L ++ + I + + + Y +F Y V
Sbjct: 82 FVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ---VFAKYNVSRLQPYL 138
Query: 150 ALKDLTILILLGCAVLSL--AFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQ 207
L+ A+L L A + G+ G G + + ++ +
Sbjct: 139 KLRQ---------ALLELRPAKNVLIDGVL-GS--GKTWVAL-------DVCLSYKVQCK 179
Query: 208 FDKFSKVSNNIQ-IDVIRNGRRQQI-SIFEIVVGDVICLKIGDQVPANG-----LFLDGH 260
D I +++ ++ E++ + +I + + L H
Sbjct: 180 MD------FKIFWLNL---KNCNSPETVLEMLQK--LLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 261 SLQVDESSMTGESDHVE-------VNSSQ--NPFLFSGTKVADGYARMLATSVGMNTTWG 311
S+Q + + + V +++ N F + ++L T T +
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF--------NLSCKILLT-----TRFK 275
Query: 312 QMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLLKKTDNTSHVHWKG---A 368
Q+ +S + L LT K L+L L + +
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKS------LLLKYLDCRPQDLPREVLTTNPRR 329
Query: 369 AEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRN 426
+I N K+++ ++ II+ SSL + E+R
Sbjct: 330 LSIIAESIRDGLATWDNWKHVN---CDKLTTIIE----SSL-------NVLEPAEYRK 373
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 819 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.94 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.93 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.66 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.77 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.67 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.61 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.44 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.29 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.18 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.17 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.14 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.14 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.09 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.06 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.05 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.01 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.98 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.85 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.82 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.81 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.79 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.75 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.74 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.74 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.7 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.69 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.68 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.68 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.68 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.68 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.67 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.66 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.62 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.61 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.57 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.55 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.51 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.48 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.47 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.4 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.39 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.38 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.35 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.35 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.35 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.34 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.31 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.31 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.28 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.27 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.27 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.25 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.23 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.21 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.19 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.19 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.17 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.15 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.14 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.12 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.11 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.1 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.09 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.09 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.08 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.07 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.05 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.04 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.03 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.03 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.02 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.02 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.01 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.01 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.0 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.96 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.93 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.92 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.91 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.91 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.89 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.88 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.88 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.78 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.77 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.76 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.72 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.72 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.7 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.68 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.67 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.66 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.66 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.66 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.64 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.54 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.53 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.52 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.52 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.48 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.48 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.42 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.4 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.35 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.34 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.2 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.07 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.0 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.95 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.94 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.87 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.86 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.79 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.78 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.54 | |
| 4aqr_D | 57 | Calcium-transporting ATPase 8, plasma membrane-TY; | 96.53 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.51 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.46 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 96.34 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.23 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.07 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.04 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.95 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 95.94 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 95.84 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 95.67 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.65 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.49 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 94.97 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.93 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 94.86 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.66 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.57 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.28 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 93.94 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 92.37 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 92.34 | |
| 2l1w_B | 26 | Vacuolar calcium ATPase BCA1 peptide; calmodulin, | 92.22 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 88.74 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 88.46 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 87.37 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 85.06 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 84.45 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 83.89 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 83.88 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 83.81 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 82.31 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-109 Score=1030.39 Aligned_cols=708 Identities=25% Similarity=0.371 Sum_probs=617.7
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcc-----c
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKE-----H 174 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~-----~ 174 (819)
.++++++.|+||+++|||++| +++|+++||+|.+++++.+++|+.++++|++++.++|+++++++++.+... .
T Consensus 57 ~~~~~~~~l~~~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~ 134 (1034)
T 3ixz_A 57 SVAELEQKYQTSATKGLSASL--AAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDL 134 (1034)
T ss_pred CHHHHHHHhCCCcccCCCHHH--HHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 799999999999999999988 999999999999999999999999999999999999999999998765321 1
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccce
Q 003452 175 GLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANG 254 (819)
Q Consensus 175 g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg 254 (819)
...+.|++++.|++++++...++.+++++.+++.++|.++.+ .+++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 135 ~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~-~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~ 213 (1034)
T 3ixz_A 135 TTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVP-QQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADI 213 (1034)
T ss_pred ccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCC-CeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCCe
Confidence 122468899888888888889999999999999999998754 4799999999999999999999999999999999999
Q ss_pred EEEeccceeEecccccCCCceeeecCC--------CCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCCh
Q 003452 255 LFLDGHSLQVDESSMTGESDHVEVNSS--------QNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTP 326 (819)
Q Consensus 255 ~ll~g~~l~VDES~LTGES~pv~k~~~--------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 326 (819)
++++|+++.||||+|||||.|+.|.+. .++++|+||.|.+|.++++|++||++|++|||++++.+.+.++||
T Consensus 214 ~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~tp 293 (1034)
T 3ixz_A 214 RILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTP 293 (1034)
T ss_pred EEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccCCCc
Confidence 999999889999999999999999753 357799999999999999999999999999999999998999999
Q ss_pred hHHHHHHHHhhHhHHHHHHHHHHHHHHh----------------------------------------------------
Q 003452 327 LQARLNKLTSSTGKIGLAVAFLVLAVLL---------------------------------------------------- 354 (819)
Q Consensus 327 lq~~l~~~a~~~~~~~l~~a~l~~~v~~---------------------------------------------------- 354 (819)
+|+.+++++.++..+++++++++++++.
T Consensus 294 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak~~~lvr~l~a 373 (1034)
T 3ixz_A 294 IAIEIEHFVDIIAGLAILFGATFFIVAMCIGYTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEA 373 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHHhhCCeEecChHH
Confidence 9999999999999888887777665432
Q ss_pred --------------------------c-----------------------------------------------------
Q 003452 355 --------------------------K----------------------------------------------------- 355 (819)
Q Consensus 355 --------------------------~----------------------------------------------------- 355 (819)
.
T Consensus 374 vE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~ 453 (1034)
T 3ixz_A 374 VETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVP 453 (1034)
T ss_pred HHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhccceeccCcCCCccc
Confidence 0
Q ss_pred ---------------------------------------------------c---CCCceEEEecchHHHHHHhhhhccc
Q 003452 356 ---------------------------------------------------K---TDNTSHVHWKGAAEMILAMCSSYYD 381 (819)
Q Consensus 356 ---------------------------------------------------~---~~~~~~~~~KGa~e~il~~c~~~~~ 381 (819)
. .++++.+++|||||.++++|+.+..
T Consensus 454 ~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~ 533 (1034)
T 3ixz_A 454 KRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILI 533 (1034)
T ss_pred CceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhc
Confidence 0 0123567899999999999998774
Q ss_pred ccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccch----hhhhhhcccCcEEEEEEEeeCCCCccHHHH
Q 003452 382 ASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNE----KDQKKLIEDNLTLLGLVGIKDPCRPGVKKA 457 (819)
Q Consensus 382 ~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~----~~~~~~~e~~l~~lG~v~i~D~lr~~v~~a 457 (819)
+|...|++++.++.+.+.+++++.+|+||+++|||.++.++.+.. ....+.+|+|++|+|+++++||+||+++++
T Consensus 534 -~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~a 612 (1034)
T 3ixz_A 534 -KGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDA 612 (1034)
T ss_pred -CCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccCCCchhHHHH
Confidence 788889999999999999999999999999999999875433211 112234689999999999999999999999
Q ss_pred HHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCC-------------------CCccceecccccccCCHHHHHHHh
Q 003452 458 VEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQD-------------------TSTGAVLEGEEFRNYTHEERMEKV 518 (819)
Q Consensus 458 I~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~-------------------~~~~~vi~g~~~~~~~~~~~~~~~ 518 (819)
|++|+++||+|+|+|||+..||.++|++|||..++.. .....+++|.++..+.++++.+.+
T Consensus 613 I~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~~~ 692 (1034)
T 3ixz_A 613 VLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEAL 692 (1034)
T ss_pred HHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhCCHHHHHHHH
Confidence 9999999999999999999999999999999754321 112357899999999999998888
Q ss_pred hhhc--eeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 519 DKIC--VMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 519 ~~~~--v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
.+.. +|+|++|+||.++|+.+|+.|++|+|+|||.||+|||++||+|||||++|+++||++||+|+.+||+++++.++
T Consensus 693 ~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai 772 (1034)
T 3ixz_A 693 RTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGV 772 (1034)
T ss_pred HhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHH
Confidence 7764 99999999999999999999999999999999999999999999999899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCC-CC
Q 003452 597 RWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGR-TE 675 (819)
Q Consensus 597 ~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r-~~ 675 (819)
++||++|+||+|+++|.+++|+..++..+++.++..+.|++++|+||+|+++|.+|+++|++|||++++|+|||+++ ++
T Consensus 773 ~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~palal~~e~~~~~~m~~~Pr~~~~~ 852 (1034)
T 3ixz_A 773 EQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRD 852 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcCCCChhhhhCCCCCCccc
Confidence 99999999999999999999999999999999888899999999999999999999999999999999999999987 68
Q ss_pred CcchHHHHHHHHHH-HHHHHHHHHHHHHhhc--------cccCCc---------------------------chhhhHHH
Q 003452 676 PLITNIMWRNLVAQ-ALYQRAVLLTLQFRGE--------SIFGVN---------------------------KKVKETLI 719 (819)
Q Consensus 676 ~li~~~~~~~i~~~-~~~~~~v~~~l~~~~~--------~~~~~~---------------------------~~~~~T~~ 719 (819)
+++++.++..++++ ++++.+..++.+|... .+++.. ....+|++
T Consensus 853 ~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 932 (1034)
T 3ixz_A 853 RLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVF 932 (1034)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhhhhhhhhhHHHHH
Confidence 99999887765443 6666554443332211 011110 01268999
Q ss_pred HHHHHHHHHHHHHhhhccccccccc-cccchHHHHHHHHHHHHHHHHH--HHHHhHccccccCChhhHHHHHHHHHHHHH
Q 003452 720 FNTFVLCQVFNEFNARKLEKKNVFE-GIHKNRLFLGIIGTTIVLQVVM--VEFLKNFADTERLNWGQWSACIGFAAASWP 796 (819)
Q Consensus 720 f~~~v~~q~~n~~~~r~~~~~~~~~-~~~~n~~~~~~i~~~~~~~~~~--v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~ 796 (819)
|+++|++|+||.+++|+. +.++|+ ++++|+++++++++++++|+++ +++++.+|++.|+++.+|+++++++++.++
T Consensus 933 f~~lv~~q~~~~~~~r~~-~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~ 1011 (1034)
T 3ixz_A 933 FISIEMCQIADVLIRKTR-RLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGLLIFV 1011 (1034)
T ss_pred HHHHHHHHHHHHHhhccC-CCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999984 456665 8899999999999998888765 467899999999999999999999999999
Q ss_pred HHHHHhhccC--CCCccc
Q 003452 797 IGWLVKCIPV--PAKPFS 812 (819)
Q Consensus 797 ~~~~~k~i~~--~~~~~~ 812 (819)
+.++.|++.. |..|+.
T Consensus 1012 ~~e~~K~~~r~~~~~~~~ 1029 (1034)
T 3ixz_A 1012 YDEIRKLGVRCCPGSWWD 1029 (1034)
T ss_pred HHHHHHHHHHhCCCChhh
Confidence 9999998853 344443
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-107 Score=1011.44 Aligned_cols=701 Identities=25% Similarity=0.356 Sum_probs=611.4
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcc-----c
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKE-----H 174 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~-----~ 174 (819)
.++++++.|+++..+||+++| +++|+++||+|.+++++.+|+|+.++++|+++++++|++++++|++.+... +
T Consensus 52 ~~~~~~~~l~t~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 129 (1028)
T 2zxe_A 52 SLDELHNKYGTDLTRGLTNAR--AKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDE 129 (1028)
T ss_dssp CHHHHHHHHTCCSSSCBCHHH--HHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred CHHHHHHHhCcCccCCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 789999999999999999977 999999999999999989999999999999999999999999998876432 1
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccce
Q 003452 175 GLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANG 254 (819)
Q Consensus 175 g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg 254 (819)
.+.++|++++.|++++++...++.+++++.+++.++|.++.+ .+++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 130 ~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~-~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 208 (1028)
T 2zxe_A 130 PANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVP-QQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADL 208 (1028)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSC-SEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEE
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-CeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeeceE
Confidence 122468899888888888888999999999999999988754 5799999999999999999999999999999999999
Q ss_pred EEEeccceeEecccccCCCceeeecCCC--------CCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCCh
Q 003452 255 LFLDGHSLQVDESSMTGESDHVEVNSSQ--------NPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTP 326 (819)
Q Consensus 255 ~ll~g~~l~VDES~LTGES~pv~k~~~~--------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 326 (819)
++++|+++.||||+|||||.|+.|.+.. .+++|+||.|.+|.++++|++||.+|++|+|++++.+++.++||
T Consensus 209 ~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~ 288 (1028)
T 2zxe_A 209 RIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTP 288 (1028)
T ss_dssp EEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCCCH
T ss_pred EEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCCCc
Confidence 9999988899999999999999998532 25799999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhHhHHHHHHHHHHHHHHh----------------------------------------------------
Q 003452 327 LQARLNKLTSSTGKIGLAVAFLVLAVLL---------------------------------------------------- 354 (819)
Q Consensus 327 lq~~l~~~a~~~~~~~l~~a~l~~~v~~---------------------------------------------------- 354 (819)
+|+.+++++.+++.++++++++++++++
T Consensus 289 lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~~~a 368 (1028)
T 2zxe_A 289 IAIEIEHFIHIITGVAVFLGVSFFILSLILGYSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEA 368 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESSTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHhhCCceeccchH
Confidence 9999999999999998888777765421
Q ss_pred -----------------------------c-------c-----------------------------------C------
Q 003452 355 -----------------------------K-------K-----------------------------------T------ 357 (819)
Q Consensus 355 -----------------------------~-------~-----------------------------------~------ 357 (819)
. . .
T Consensus 369 vE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~ 448 (1028)
T 2zxe_A 369 VETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPIL 448 (1028)
T ss_dssp HHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGG
T ss_pred hhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCeeecCCCCCccc
Confidence 0 0 0
Q ss_pred --------------------------------------------------------CCceEEEecchHHHHHHhhhhccc
Q 003452 358 --------------------------------------------------------DNTSHVHWKGAAEMILAMCSSYYD 381 (819)
Q Consensus 358 --------------------------------------------------------~~~~~~~~KGa~e~il~~c~~~~~ 381 (819)
++++.+++|||||.++++|+.+.
T Consensus 449 ~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~- 527 (1028)
T 2zxe_A 449 KRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTIL- 527 (1028)
T ss_dssp GSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEEC-
T ss_pred cceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhh-
Confidence 01235688999999999998764
Q ss_pred ccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccch----hhhhhhcccCcEEEEEEEeeCCCCccHHHH
Q 003452 382 ASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNE----KDQKKLIEDNLTLLGLVGIKDPCRPGVKKA 457 (819)
Q Consensus 382 ~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~----~~~~~~~e~~l~~lG~v~i~D~lr~~v~~a 457 (819)
.+|...+++++.++.+.+.+++++++|+||+++|||+++.++++.. ....+..|.|++|+|+++++||+||+++++
T Consensus 528 ~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~a 607 (1028)
T 2zxe_A 528 LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDA 607 (1028)
T ss_dssp BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHH
T ss_pred cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCCCChhHHHH
Confidence 4788889999999999999999999999999999998865432210 111234578999999999999999999999
Q ss_pred HHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCC-------------------CccceecccccccCCHHHHHHHh
Q 003452 458 VEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDT-------------------STGAVLEGEEFRNYTHEERMEKV 518 (819)
Q Consensus 458 I~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~-------------------~~~~vi~g~~~~~~~~~~~~~~~ 518 (819)
|++|+++||+|+|+|||+..||.++|++|||..++... ....+++|+++..+.++++.+.+
T Consensus 608 I~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~~~~ 687 (1028)
T 2zxe_A 608 VGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDIL 687 (1028)
T ss_dssp HHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHHHHHH
Confidence 99999999999999999999999999999998542110 11468899999999999999988
Q ss_pred hhhc--eeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 519 DKIC--VMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 519 ~~~~--v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
.++. +|||++|+||.++|+.+|+.|++|+|+|||.||+|||++||||||||.+|+++||++||+++++|||++|++++
T Consensus 688 ~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i 767 (1028)
T 2zxe_A 688 HYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGV 767 (1028)
T ss_dssp HHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHH
T ss_pred hhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHH
Confidence 8885 99999999999999999999999999999999999999999999999779999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCC-
Q 003452 597 RWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTE- 675 (819)
Q Consensus 597 ~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~- 675 (819)
++||++|+|+++++.|++++|+..++..+++.++..+.|++++|++|+|+++|.+|+++|++|+|++++|++||++++.
T Consensus 768 ~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~m~~~Pr~~~~~ 847 (1028)
T 2zxe_A 768 EEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTD 847 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCCCCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGGSCCCCTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHHHhccCccchhhhccCCCCcccc
Confidence 9999999999999999999999999998888888889999999999999999999999999999999999999998766
Q ss_pred CcchHHHHHHH-HHHHHHHHHHHHHHHHh-----hc---c-------ccCC-----------c---------chhhhHHH
Q 003452 676 PLITNIMWRNL-VAQALYQRAVLLTLQFR-----GE---S-------IFGV-----------N---------KKVKETLI 719 (819)
Q Consensus 676 ~li~~~~~~~i-~~~~~~~~~v~~~l~~~-----~~---~-------~~~~-----------~---------~~~~~T~~ 719 (819)
+++++.++..+ +..++++.++.++.++. +. . ++.. . ....+|++
T Consensus 848 ~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~ 927 (1028)
T 2zxe_A 848 KLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSF 927 (1028)
T ss_dssp CSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhHHHHHH
Confidence 99999987764 45567776655443322 11 0 1110 0 02578999
Q ss_pred HHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHHHHH--HHhHccccccCChhhHHHHHHHHHHHHHH
Q 003452 720 FNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVE--FLKNFADTERLNWGQWSACIGFAAASWPI 797 (819)
Q Consensus 720 f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~v~--~~~~~f~~~~l~~~~w~~~~~~~~~~~~~ 797 (819)
|++++++|+||.++||+. +.++|+..++|+++++++++++++|+++++ +++.+|++.||++.+|+++++++++.+++
T Consensus 928 f~~~v~~q~~~~~~~r~~-~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~ 1006 (1028)
T 2zxe_A 928 FISIVVVQWADLIICKTR-RNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSLIIFLY 1006 (1028)
T ss_dssp HHHHHHHHHHHHHHTTCS-SSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHHHTCCCCCCGGGGGTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccC-CcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHHhhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999984 556777558999999999999998887765 57899999999999999999999999999
Q ss_pred HHHHhhcc
Q 003452 798 GWLVKCIP 805 (819)
Q Consensus 798 ~~~~k~i~ 805 (819)
.++.|++.
T Consensus 1007 ~e~~k~~~ 1014 (1028)
T 2zxe_A 1007 DEMRRFII 1014 (1028)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999774
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-105 Score=993.87 Aligned_cols=700 Identities=27% Similarity=0.418 Sum_probs=610.4
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccC--cc
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHG--LK 177 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g--~~ 177 (819)
.++++++.|++|.++||+++| +++|+++||+|.++.++++++|+.++++|+++++++|++++++|+++++...+ +.
T Consensus 9 ~~~~~~~~l~~~~~~GLs~~e--~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~ 86 (995)
T 3ar4_A 9 STEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETI 86 (995)
T ss_dssp CHHHHHHHHTCCTTTCBCHHH--HHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGG
T ss_pred CHHHHHHHhCCCcccCCCHHH--HHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 689999999999999999877 99999999999999988999999999999999999999999999999876533 22
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCE--EEEEecCccccCCEEEEecCCeeccceE
Q 003452 178 EGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGR--RQQISIFEIVVGDVICLKIGDQVPANGL 255 (819)
Q Consensus 178 ~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~--~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ 255 (819)
..|+|+++|++++++...++.+++++.++++++|.++.+ .+++|+|||+ .++|+++||+|||+|.|++||+|||||+
T Consensus 87 ~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~-~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ 165 (995)
T 3ar4_A 87 TAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEP-EMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIR 165 (995)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSC-SEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEE
T ss_pred hhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccEE
Confidence 469999999988888888899999998899999988754 4899999987 7999999999999999999999999999
Q ss_pred EEe--ccceeEecccccCCCceeeecCC-----------CCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCC
Q 003452 256 FLD--GHSLQVDESSMTGESDHVEVNSS-----------QNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNS 322 (819)
Q Consensus 256 ll~--g~~l~VDES~LTGES~pv~k~~~-----------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 322 (819)
+++ +..+.||||+|||||.|+.|.+. .++++|+||.|.+|.++++|++||.+|++|||++++.+++.
T Consensus 166 ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~ 245 (995)
T 3ar4_A 166 ILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQ 245 (995)
T ss_dssp EEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTCCC
T ss_pred EEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcCCC
Confidence 965 45679999999999999999853 13799999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHhhHhHHHHHHHHHHHHH-------------H---------h--------------------------
Q 003452 323 EQTPLQARLNKLTSSTGKIGLAVAFLVLAV-------------L---------L-------------------------- 354 (819)
Q Consensus 323 ~~tplq~~l~~~a~~~~~~~l~~a~l~~~v-------------~---------~-------------------------- 354 (819)
++||+|+++++++.++++++++++++++++ | .
T Consensus 246 ~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~ 325 (995)
T 3ar4_A 246 DKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR 325 (995)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH
Confidence 999999999999999988877777665432 0 0
Q ss_pred --------------------------------------------c----c----------------C-------------
Q 003452 355 --------------------------------------------K----K----------------T------------- 357 (819)
Q Consensus 355 --------------------------------------------~----~----------------~------------- 357 (819)
. . +
T Consensus 326 ~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 405 (995)
T 3ar4_A 326 RMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRS 405 (995)
T ss_dssp HHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCG
T ss_pred HhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccccccccccc
Confidence 0 0 0
Q ss_pred --------------------------------------------------------------------------------
Q 003452 358 -------------------------------------------------------------------------------- 357 (819)
Q Consensus 358 -------------------------------------------------------------------------------- 357 (819)
T Consensus 406 ~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 485 (995)
T 3ar4_A 406 GQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFT 485 (995)
T ss_dssp GGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEEEE
T ss_pred cccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceEEE
Confidence
Q ss_pred -----------------CC-----ceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHh--hhCCceeee
Q 003452 358 -----------------DN-----TSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGM--ASSSLRCIA 413 (819)
Q Consensus 358 -----------------~~-----~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~--a~~glr~l~ 413 (819)
+| +..+++|||||.++++|+.+.. .+...|++++.++.+.+.++++ +++|+||++
T Consensus 486 ~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa 564 (995)
T 3ar4_A 486 LEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLA 564 (995)
T ss_dssp EEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEE
T ss_pred eecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhc-CCCcccCCHHHHHHHHHHHHHHHhhhccceEEE
Confidence 00 1345689999999999987654 3456788999999999999999 999999999
Q ss_pred eecccCCcccccc---hhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC
Q 003452 414 FAHKQVPEEEHRN---EKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILK 490 (819)
Q Consensus 414 ~a~~~~~~~~~~~---~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~ 490 (819)
+|||+++..+... .......+|+|++|+|+++++||+||+++++|+.|+++||+++|+|||+..||.++|++|||..
T Consensus 565 ~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~ 644 (995)
T 3ar4_A 565 LATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFG 644 (995)
T ss_dssp EEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSC
T ss_pred EEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCC
Confidence 9999885432110 0112345688999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCC
Q 003452 491 PGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGI 570 (819)
Q Consensus 491 ~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~ 570 (819)
.+.+. ...+++|+++..+.++++.+.+++..+|||++|+||.++|+.+|++|++|+|+|||.||+|||++||+|||||
T Consensus 645 ~~~~i-~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg- 722 (995)
T 3ar4_A 645 ENEEV-ADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG- 722 (995)
T ss_dssp TTCCC-TTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET-
T ss_pred CCCcc-cceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC-
Confidence 43221 2468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhh
Q 003452 571 QGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDT 650 (819)
Q Consensus 571 ~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~ 650 (819)
+|+++||++||+++++|+|.++++++++||++|+||+|++.|++++|+..++..+++.++..+.|++++|++|+|+++|.
T Consensus 723 ~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~ 802 (995)
T 3ar4_A 723 SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDG 802 (995)
T ss_dssp TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTH
T ss_pred CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988888888888899999999999999999
Q ss_pred HhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHh-hcc--------ccCC-----------
Q 003452 651 LGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFR-GES--------IFGV----------- 710 (819)
Q Consensus 651 l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~-~~~--------~~~~----------- 710 (819)
+|+++|++++|++++|++||+.++++++++.++++++.+++++.++.+..+++ ... +...
T Consensus 803 ~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (995)
T 3ar4_A 803 LPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHP 882 (995)
T ss_dssp HHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCS
T ss_pred HHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhccccccccccc
Confidence 99999999999999999999999999999999999999999987665432211 100 0000
Q ss_pred ----------cchhhhHHHHHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHHH--HHHHhHcccccc
Q 003452 711 ----------NKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVM--VEFLKNFADTER 778 (819)
Q Consensus 711 ----------~~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~--v~~~~~~f~~~~ 778 (819)
.....+|++|+++|++|++|.+|||+.+...+..++++|+++++++++++++|+++ +++++.+|++.|
T Consensus 883 ~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~ 962 (995)
T 3ar4_A 883 HFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKA 962 (995)
T ss_dssp CCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHHTTCCC
T ss_pred cccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 02347899999999999999999998654444458899999999888887777655 467899999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHhhcc
Q 003452 779 LNWGQWSACIGFAAASWPIGWLVKCIP 805 (819)
Q Consensus 779 l~~~~w~~~~~~~~~~~~~~~~~k~i~ 805 (819)
+++.+|+++++++++.+++.++.|++.
T Consensus 963 l~~~~w~~~~~~~~~~~~~~e~~k~~~ 989 (995)
T 3ar4_A 963 LDLTQWLMVLKISLPVIGLDEILKFIA 989 (995)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999875
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-101 Score=937.87 Aligned_cols=687 Identities=21% Similarity=0.274 Sum_probs=569.6
Q ss_pred CccCHhHHHHhcccCChhHH---H---HhcCHHH-HHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHH
Q 003452 76 FKIDQTSLVELVKMKDLDKL---H---EFGGIRG-VASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVV 148 (819)
Q Consensus 76 ~~~~~~~l~~~~~~~~~~~l---~---~~ggv~g-l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~ 148 (819)
...+.++|.+.++.+|.+.. + ..|++++ +++.|+++..+||+++| +++|+++||+|.++++ .+++|..++
T Consensus 41 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e--a~~r~~~~G~N~l~~~-~~~~~~~~l 117 (920)
T 1mhs_A 41 EDEDIDALIEDLESHDGHDAEEEEEEATPGGGRVVPEDMLQTDTRVGLTSEE--VVQRRRKYGLNQMKEE-KENHFLKFL 117 (920)
T ss_dssp CHHHHHHHHHHHSSCCCCCCSSSCCCSHHHHHSCCSSTTTTTCCCCCCCSHH--HHHHHHHTSSSSCCCC-CCSSHHHHT
T ss_pred hhcCHHHHHHHHhhhcccccccchhhhhcCccchhHHHHhCCCcCCCCCHHH--HHHHHHhcCCCccCCC-CCCHHHHHH
Confidence 45777788777765443321 1 2344544 34679999889999987 9999999999999976 477888999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHhhcccCcccchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEE
Q 003452 149 DALKDLTILILLGCAVLSLAFGIKEHGLKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRR 228 (819)
Q Consensus 149 ~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~ 228 (819)
++|++|+.+++++++++++++| .|.|++.|+++++++..++.+++|+.+++.++|.++.+ .+++|+|||++
T Consensus 118 ~~f~~~~~~ll~~aai~s~~~g--------~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~-~~a~V~RdG~~ 188 (920)
T 1mhs_A 118 GFFVGPIQFVMEGAAVLAAGLE--------DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLA-LKAVVLRDGTL 188 (920)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCS--------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCC-SSCEEECSSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CEEEEEECCEE
Confidence 9999999999999999998876 68898888888888888999999999999999988754 47999999999
Q ss_pred EEEecCccccCCEEEEecCCeeccceEEEeccc-eeEecccccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCc
Q 003452 229 QQISIFEIVVGDVICLKIGDQVPANGLFLDGHS-LQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMN 307 (819)
Q Consensus 229 ~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~-l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~ 307 (819)
++|+++||||||+|.|++||+|||||++++|++ +.||||+|||||.||.|.+ ++.+|+||.|.+|.++++|++||.+
T Consensus 189 ~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~LTGES~PV~K~~--gd~v~sGT~v~~G~~~~~V~~tG~~ 266 (920)
T 1mhs_A 189 KEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHK--GDQVFASSAVKRGEAFVVITATGDN 266 (920)
T ss_dssp EECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTTTSSCCCCEECCS--SCEECSCBCCSCCCEEEEEEECSTT
T ss_pred EEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeeccccCCCCcceEecC--CCeeecCceEecceEEEEEEEeCCc
Confidence 999999999999999999999999999999996 8999999999999999994 7899999999999999999999999
Q ss_pred ChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh---------------------------------
Q 003452 308 TTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL--------------------------------- 354 (819)
Q Consensus 308 T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~--------------------------------- 354 (819)
|++|+|.+++++++.+++|+|+.+++++.++.++.+++++++++.++
T Consensus 267 T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~~~~~~~~~l~~av~llV~aiP~aLp~~vti~l 346 (920)
T 1mhs_A 267 TFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFYRSNPIVQILEFTLAITIIGVPVGLPAVVTTTM 346 (920)
T ss_dssp CSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTCCHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred CHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhCchhHHHHHHHHH
Confidence 99999999999888899999999999999998887777766654321
Q ss_pred --------------------------------------------------------------------------------
Q 003452 355 -------------------------------------------------------------------------------- 354 (819)
Q Consensus 355 -------------------------------------------------------------------------------- 354 (819)
T Consensus 347 a~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~~~~~ll~~a~l~~~~~~~~~~P~e~Al 426 (920)
T 1mhs_A 347 AVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPEDLMLTACLAASRKKKGIDAIDKAF 426 (920)
T ss_dssp HHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCCCCTHHHHHHHHSCCCSSCSCCSHHHHH
T ss_pred HHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCCCCHHHHHHHHHHhcCCcccCCChHHHHH
Confidence
Q ss_pred ------------------------------------ccCCCceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHH
Q 003452 355 ------------------------------------KKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQ 398 (819)
Q Consensus 355 ------------------------------------~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 398 (819)
..++|+..+++||+||.++++|+. ..+++++.++.+.
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~-------~~~~~~~~~~~~~ 499 (920)
T 1mhs_A 427 LKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEE-------DHPIPEEVDQAYK 499 (920)
T ss_dssp HHHHHHSSSCCGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCC-------SSCCCHHHHHHHH
T ss_pred HHHHHhcccchhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccc-------cCCCCHHHHHHHH
Confidence 000123346789999999999963 2357788888899
Q ss_pred HHHHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHH
Q 003452 399 QIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFT 478 (819)
Q Consensus 399 ~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~t 478 (819)
+.+++++.+|+|++++||+.. |.+++|+|+++++||+||+++++|++|+++||+|+|+||||+.|
T Consensus 500 ~~~~~~a~~G~RvL~vA~~~~---------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~T 564 (920)
T 1mhs_A 500 NKVAEFATRGFRSLGVARKRG---------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGI 564 (920)
T ss_dssp HHHHHHHTSSCCCCEECCCSS---------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHH
T ss_pred HHHHHHHhCCCEEEEEEEecc---------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHH
Confidence 999999999999999998841 46789999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHH
Q 003452 479 AKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPA 558 (819)
Q Consensus 479 a~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~a 558 (819)
|.+||+++||..... .....+++|. ..++++++.+.++++.||||++|+||.++|+.||++|++|+|+|||+||+||
T Consensus 565 A~aIA~~lGI~~~~~-~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapa 641 (920)
T 1mhs_A 565 ARETSRQLGLGTNIY-NAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPS 641 (920)
T ss_dssp HHHHHHHHTSSCSCC-CSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHH
T ss_pred HHHHHHHcCCCcccc-CccceeecCc--ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHH
Confidence 999999999974211 1134566776 5677888888899999999999999999999999999999999999999999
Q ss_pred hhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhH
Q 003452 559 LKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTA 638 (819)
Q Consensus 559 L~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~ 638 (819)
|++|||||||| +|+++||++||+++++|+|++|++++++||++|+||+|++.|.++.|+....+..+...+.+ .|+++
T Consensus 642 Lk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~-~~l~~ 719 (920)
T 1mhs_A 642 LKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILN-RSLNI 719 (920)
T ss_dssp HHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS-CCCCH
T ss_pred HHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCCH
Confidence 99999999999 89999999999999999999999999999999999999999999999987544444333333 45999
Q ss_pred HHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhcc-----ccCCcch
Q 003452 639 VQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGES-----IFGVNKK 713 (819)
Q Consensus 639 ~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~~-----~~~~~~~ 713 (819)
.|++|+|+++|. |++++++|+++.+ +||++++.+- +++.++..+++..+..++.++.... .+..+..
T Consensus 720 ~~il~~~l~~d~-~~lal~~e~~~~~---~~P~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (920)
T 1mhs_A 720 ELVVFIAIFADV-ATLAIAYDNAPYS---QTPVKWNLPK----LWGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFG 791 (920)
T ss_dssp HHHHHHHHHHTT-HHHHCCCCCSGGG---GSCCCCCSSS----CSSCHHHHHHHHHHHHHHHHHHHTTTTTTCCSSSSSS
T ss_pred HHHHHHHHHHHH-HhhhhcccCcccc---cCCCCchHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhh
Confidence 999999999997 8999999998765 5676665422 2222223333333322222211110 0111234
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHHHHHHHhHccccccCChhhHHHHHHHHHH
Q 003452 714 VKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMVEFLKNFADTERLNWGQWSACIGFAAA 793 (819)
Q Consensus 714 ~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~ 793 (819)
..+|++|++++++|+++.+++|+.+ ++|++. .|+++++++++..++++++.++ + +|.+.|++|.+|+++++++++
T Consensus 792 ~~~T~~f~~lv~~~~~~~~~~R~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-~f~~~~l~~~~~~~~~~~~~~ 866 (920)
T 1mhs_A 792 NMDEVLFLQISLTENWLIFITRANG--PFWSSI-PSWQLSGAIFLVDILATCFTIW-G-WFEHSDTSIVAVVRIWIFSFG 866 (920)
T ss_dssp SHHHHHHHHHHHHHHHHTTSSSCSS--SCSCCS-CTHHHHHHHHHHHHHHHHHHSS-S-STTSCSHHHHTHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccch--hhhcCc-hHHHHHHHHHHHHHHHHHHHHh-h-hhccCCCCHHHHHHHHHHHHH
Confidence 6899999999999999999999843 366654 7888888777777777766543 3 899999999999999999999
Q ss_pred HHHHHHHHhhccCCCCcccchhc
Q 003452 794 SWPIGWLVKCIPVPAKPFSSYLK 816 (819)
Q Consensus 794 ~~~~~~~~k~i~~~~~~~~~~~~ 816 (819)
.+++.++.|++-...++|.+..+
T Consensus 867 ~~~~~e~~k~~~~~~~~fd~~~~ 889 (920)
T 1mhs_A 867 IFCIMGGVYYILQDSVGFDNLMH 889 (920)
T ss_dssp HHHHHHHHHHCCCCCCTTHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHhc
Confidence 99999999998888778776543
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-98 Score=906.52 Aligned_cols=675 Identities=20% Similarity=0.302 Sum_probs=521.4
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcccc
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLKEG 179 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~~~ 179 (819)
.++++++.|+++ .+||+++| +++|+++||+|.+++++ +++|+.++++|++|+.++|+++++++++++... +....
T Consensus 18 ~~~~~~~~l~~~-~~GLs~~e--~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~-~~~~~ 92 (885)
T 3b8c_A 18 PIEEVFQQLKCS-REGLTTQE--GEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGD-GRPPD 92 (885)
T ss_dssp STTCCTTTSSSC-SSCSTHHH--HHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCT-TSCSC
T ss_pred CHHHHHHHhCCC-CCCCCHHH--HHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccccc
Confidence 466778888988 68999977 99999999999999876 777888899999999999999999998877432 33446
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEec
Q 003452 180 WYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDG 259 (819)
Q Consensus 180 ~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g 259 (819)
|+|++.|++++++...++.+++++.+++.++|.++.+ .+++|+|||++++|+++||+|||+|.|++||+|||||++++|
T Consensus 93 ~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~-~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g 171 (885)
T 3b8c_A 93 WQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLA-PKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEG 171 (885)
T ss_dssp CTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCS-CCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEc
Confidence 9999888877777777888899999999999987653 478999999999999999999999999999999999999999
Q ss_pred cceeEecccccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHh
Q 003452 260 HSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTG 339 (819)
Q Consensus 260 ~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~ 339 (819)
+++.||||+|||||.||.|.+ ++.+|+||.|.+|.++++|++||.+|++|||.+++++ ..+++|+|+.++++++++.
T Consensus 172 ~~l~VdES~LTGES~Pv~K~~--g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~ 248 (885)
T 3b8c_A 172 DPLKVDQSALTGESLPVTKHP--GQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCI 248 (885)
T ss_dssp SCBCCCCCSTTCCSSCCCBSS--CCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHHH
T ss_pred CcccccccccCCCCcceEecC--CCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHHHHHHH
Confidence 998999999999999999994 7899999999999999999999999999999998876 6789999999999998843
Q ss_pred H-HHHHHHHHHHHHHh---------------------------------------------------------------c
Q 003452 340 K-IGLAVAFLVLAVLL---------------------------------------------------------------K 355 (819)
Q Consensus 340 ~-~~l~~a~l~~~v~~---------------------------------------------------------------~ 355 (819)
. +++.+++++++++. .
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~ 328 (885)
T 3b8c_A 249 CSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 328 (885)
T ss_dssp HHHHHHHHHHSTTTTTTTCSCSTTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEE
Confidence 3 44434433332211 3
Q ss_pred cCCCce-----EE-------Eecc-hHHHHH---Hhhhhc-------------------------------cc-------
Q 003452 356 KTDNTS-----HV-------HWKG-AAEMIL---AMCSSY-------------------------------YD------- 381 (819)
Q Consensus 356 ~~~~~~-----~~-------~~KG-a~e~il---~~c~~~-------------------------------~~------- 381 (819)
||+|+. .+ +.+| .++.++ ..|+.. ++
T Consensus 329 DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ll~~aa~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~pF~s~~k~~s 408 (885)
T 3b8c_A 329 DKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTA 408 (885)
T ss_dssp ECCCCCSCCCCCCCSCCCCSSCSSTTHHHHHHHHHHHCCSSSCCSHHHHHHHTTCCTTCCCCSSCCBCCCCCCTTTCCCC
T ss_pred CCCCCcccCceEEEEEEEeccCCCCCHHHHHHHHHHHhCCCCCCchHHHHHHHhhchhhHhhcCceeecccCCcccceEE
Confidence 555531 11 1122 222222 223211 00
Q ss_pred -----ccCCccc---------C-----CHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEE
Q 003452 382 -----ASGNIKY---------L-----DDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLG 442 (819)
Q Consensus 382 -----~~g~~~~---------l-----~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG 442 (819)
.+|.... + +++.++.+.+.+++++++|+|++++||++++++. .+..|++++|+|
T Consensus 409 v~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~-------~~~~e~~l~~lG 481 (885)
T 3b8c_A 409 LTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT-------KESPGAPWEFVG 481 (885)
T ss_dssp CBBCSSSSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS-------SSCCCCCCCCCE
T ss_pred EEEEecCCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEEecccccc-------ccccccCcEEEE
Confidence 0111000 0 1122445777889999999999999999886532 234578999999
Q ss_pred EEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceeccccccc-CCHHHHHHHhhhh
Q 003452 443 LVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRN-YTHEERMEKVDKI 521 (819)
Q Consensus 443 ~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~-~~~~~~~~~~~~~ 521 (819)
+++++||+|||++++|++|+++||+|+|+||||..||.++|+++||..... ...+++|.++++ ++++++.+.++++
T Consensus 482 li~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~---~~~~l~g~~~~~~~~~~~l~~~~~~~ 558 (885)
T 3b8c_A 482 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY---PSSALLGTHKDANLASIPVEELIEKA 558 (885)
T ss_dssp EEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS---TTSSCCBGGGGTTSCCSCHHHHHHTS
T ss_pred EEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccC---CcceeeccccccccchhHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999965311 234677888776 7777788888999
Q ss_pred ceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHH
Q 003452 522 CVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRC 601 (819)
Q Consensus 522 ~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~ 601 (819)
.||+|++|+||.++|+.||++|++|+|+|||+||+|||++|||||||| +|+++||++||+++++|+|++|++++++||+
T Consensus 559 ~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~ 637 (885)
T 3b8c_A 559 DGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRA 637 (885)
T ss_dssp CCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHH
T ss_pred cEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhcccCCcccccCCCCCCCCCCcchHH
Q 003452 602 VHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEPLITNI 681 (819)
Q Consensus 602 ~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~~e~p~~~lm~~~P~~r~~~li~~~ 681 (819)
+|+||+||+.|++++|+..++..+. .....+.|++++|++|+|+++|..+ +++++|++.+. ++| +...+ +.
T Consensus 638 ~~~ni~~~i~~~l~~n~~~~~~~~~-~~~~~~~~l~p~~il~i~l~~d~~~-l~l~~~~~~~~---~~p---~~~~~-~~ 708 (885)
T 3b8c_A 638 IFQRMKNYTIYAVSITIRIVFGFML-IALIWEFDFSAFMVLIIAILNDGTI-MTISKDRVKPS---PTP---DSWKL-KE 708 (885)
T ss_dssp HHHHHHHHHHHHHHHTTTTTSTTHH-HHSSCSSCSCHHHHHHHHHHHHTTT-CCCCCCCCCCS---SCC---CSTTT-TT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCcCHHHHHHHHHHHHHHH-HhhcccccCcc---cCC---cchhH-HH
Confidence 9999999999999999865433333 3335567999999999999999875 88888876542 223 22233 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc------ccCCc-----chhhhHH-HHHHHHHHHHHHHHhhhccccccccccccch
Q 003452 682 MWRNLVAQALYQRAVLLTLQFRGES------IFGVN-----KKVKETL-IFNTFVLCQVFNEFNARKLEKKNVFEGIHKN 749 (819)
Q Consensus 682 ~~~~i~~~~~~~~~v~~~l~~~~~~------~~~~~-----~~~~~T~-~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n 749 (819)
++...+..++++.+..+.+++.+.. .++.+ ....+|. .|.+++++|+ +.|++|+. +.++++.. .|
T Consensus 709 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~-~~~~~~~~-~~ 785 (885)
T 3b8c_A 709 IFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSR-SWSFVERP-GA 785 (885)
T ss_dssp TTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSC-TTTSTTST-TT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHH-HHHHhccC-CCCcccCc-cH
Confidence 3333445555555555443332221 12321 1234344 5556788886 78999984 33344422 44
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHccccccCChhhHHHHHHHHHHHHHHHHHHhhccC
Q 003452 750 RLFLGIIGTTIVLQVVMVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCIPV 806 (819)
Q Consensus 750 ~~~~~~i~~~~~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~i~~ 806 (819)
++++.+++..++++++.+++...||++.|++|.+|+++++++++.+++.++.|++..
T Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~ 842 (885)
T 3b8c_A 786 LLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIR 842 (885)
T ss_dssp TTSGGGSSTTTTTTSSSSSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444444332445679999999999999999998999999997753
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-64 Score=600.80 Aligned_cols=459 Identities=23% Similarity=0.334 Sum_probs=361.6
Q ss_pred CCchHHHHHHHHHhhhH---HHHHHHHHHHHHHHhh----c----c------cCcccchhhHHHHHHH-HHHHHHHHHhh
Q 003452 139 PSKSLFYFVVDALKDLT---ILILLGCAVLSLAFGI----K----E------HGLKEGWYEGGSILVA-VFLVIAVSAGS 200 (819)
Q Consensus 139 ~~~~~~~~~~~~~~~~~---~~il~v~a~~s~~~g~----~----~------~g~~~~~~~~~~i~~~-v~l~~~v~~~~ 200 (819)
.+++|++..|.++++.. ..+..++...++++++ . . .+....|||+++++++ +++..+++...
T Consensus 129 ~g~~f~~~a~~~l~~~~~~md~Lv~l~~~~a~~~S~~~~~~~~~~~~~~~~~~~~~~~yfe~a~~ii~~~llg~~le~~a 208 (736)
T 3rfu_A 129 GGWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVLLGQVLELKA 208 (736)
T ss_dssp TTHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHCGGGSCSSSSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHhcccccccccccccCccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999988653 2222222223333221 1 1 1223468998866644 44445667667
Q ss_pred hhhHHHHHHHHhcccCCcceEEEe-CCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeec
Q 003452 201 NFTQNRQFDKFSKVSNNIQIDVIR-NGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVN 279 (819)
Q Consensus 201 ~~~~~~~~~~l~~~~~~~~~~V~R-dG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~ 279 (819)
+.+.++..++|.++.+ .+++|+| ||++++|++++|+|||+|.|++||+|||||++++|++ .||||+|||||.|+.|.
T Consensus 209 ~~~~~~ai~~L~~l~p-~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VDES~LTGES~Pv~K~ 286 (736)
T 3rfu_A 209 REQTGSAIRALLKLVP-ESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-FVDESMVTGEPIPVAKE 286 (736)
T ss_dssp HCCCSSHHHHHTCCCC-CEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCE-EEECSSSTTCSSCEEEC
T ss_pred HHHHHHHHHHHHhcCC-CEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEECce-EeeecccCCccccEEec
Confidence 6677777888887754 4677777 9999999999999999999999999999999999998 89999999999999999
Q ss_pred CCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHHHHHHh-----
Q 003452 280 SSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLVLAVLL----- 354 (819)
Q Consensus 280 ~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~~~v~~----- 354 (819)
.++.+++||.+.+|.++++|++||.+|.+|||++++++++.+++|+|+.+|+++.+++++.+++++++|++|.
T Consensus 287 --~gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~ 364 (736)
T 3rfu_A 287 --ASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQ 364 (736)
T ss_dssp --TTCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred --cCCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4889999999999999999999999999999999999999999999999999999999999999999888764
Q ss_pred ------------------------------------------------------------ccCCCce--------EEEec
Q 003452 355 ------------------------------------------------------------KKTDNTS--------HVHWK 366 (819)
Q Consensus 355 ------------------------------------------------------------~~~~~~~--------~~~~K 366 (819)
.|++|+. .+...
T Consensus 365 ~~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~ 444 (736)
T 3rfu_A 365 PALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTD 444 (736)
T ss_dssp SSTTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEES
T ss_pred chHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEec
Confidence 4555541 11122
Q ss_pred c-hHHHHHHhhhhc---------------cccc-----------------------CCcccC-CHHH-------HHHHHH
Q 003452 367 G-AAEMILAMCSSY---------------YDAS-----------------------GNIKYL-DDNE-------KERFQQ 399 (819)
Q Consensus 367 G-a~e~il~~c~~~---------------~~~~-----------------------g~~~~l-~~~~-------~~~~~~ 399 (819)
| ..+.++..+... ..+. |....+ +.+. ...+.+
T Consensus 445 ~~~~~~~l~~aa~le~~s~hPla~Aiv~~a~~~~~~~~~~~~f~~~~g~gv~~~~~g~~~~~G~~~~~~~~~~~~~~~~~ 524 (736)
T 3rfu_A 445 DFVEDNALALAAALEHQSEHPLANAIVHAAKEKGLSLGSVEAFEAPTGKGVVGQVDGHHVAIGNARLMQEHGGDNAPLFE 524 (736)
T ss_dssp SSCHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTCCCCCCCSCCCCCTTTEEEECSSSSCEEEESHHHHHHHCCCCHHHHH
T ss_pred CCCHHHHHHHHHHHhhcCCChHHHHHHHHHHhcCCCccCcccccccCCceEEEEECCEEEEEcCHHHHHHcCCChhHHHH
Confidence 2 122222221110 0000 000000 0111 123455
Q ss_pred HHHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHH
Q 003452 400 IIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTA 479 (819)
Q Consensus 400 ~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta 479 (819)
..++++.+|+|++.+|+ |.+++|+++++|++||+++++|++|+++|++++|+|||+..+|
T Consensus 525 ~~~~~~~~G~~vl~va~--------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a 584 (736)
T 3rfu_A 525 KADELRGKGASVMFMAV--------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTA 584 (736)
T ss_dssp HHHHHHHTTCEEEEEEE--------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHH
T ss_pred HHHHHHhcCCeEEEEEE--------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 67888999999999885 3478999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHh
Q 003452 480 KAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPAL 559 (819)
Q Consensus 480 ~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL 559 (819)
.++|+++||.. ++++++|+||.++|+.||++|+.|+|+|||.||+|||
T Consensus 585 ~~ia~~lgi~~--------------------------------v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL 632 (736)
T 3rfu_A 585 EAVAGTLGIKK--------------------------------VVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPAL 632 (736)
T ss_dssp HHHHHHHTCCC--------------------------------EECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHH
T ss_pred HHHHHHcCCCE--------------------------------EEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHH
Confidence 99999999975 8999999999999999999999999999999999999
Q ss_pred hhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcC--CCch
Q 003452 560 KETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAV-YAG--EIPL 636 (819)
Q Consensus 560 ~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~-~~~--~~pl 636 (819)
++||+||||| +|+|+++++||++++++++.++++++++||++++||+||+.|++.||+++++++..... +.| -.|+
T Consensus 633 ~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAag~l~p~~G~~l~P~ 711 (736)
T 3rfu_A 633 AKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAAGVLYPLTGLLLSPM 711 (736)
T ss_dssp HHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTSSCCCCHH
T ss_pred HhCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHH
Confidence 9999999999 89999999999999999999999999999999999999999999999999887652211 123 2466
Q ss_pred hHHHHHHHHhhhhhHhHh
Q 003452 637 TAVQLLWVNLIMDTLGAL 654 (819)
Q Consensus 637 ~~~qll~vnli~d~l~al 654 (819)
.+.-.+..+.+...+-++
T Consensus 712 ~aa~~m~~Ssv~Vv~nsl 729 (736)
T 3rfu_A 712 IAAAAMALSSVSVIINAL 729 (736)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHH
Confidence 555444444444444333
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-63 Score=585.51 Aligned_cols=439 Identities=25% Similarity=0.340 Sum_probs=333.2
Q ss_pred hhhHHHHHHHHHHH-HHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEe
Q 003452 180 WYEGGSILVAVFLV-IAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLD 258 (819)
Q Consensus 180 ~~~~~~i~~~v~l~-~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~ 258 (819)
|||+++++++++++ .+++...+.+.++..++|.++. +.+++|+|||++++|+++||+|||+|.|++||+|||||++++
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~-~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~ 173 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQ-AKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE 173 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTS-CSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE
Confidence 77877666555443 3334444444444566666654 347999999999999999999999999999999999999999
Q ss_pred ccceeEecccccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhH
Q 003452 259 GHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSST 338 (819)
Q Consensus 259 g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~ 338 (819)
|++ .||||+|||||.|+.|. .++.+|+||.+.+|.++++|+++|.+|.+|||++++++++.+++|+|+.+|+++.++
T Consensus 174 G~~-~VdeS~LTGES~Pv~K~--~g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~ 250 (645)
T 3j08_A 174 GES-YVDESMISGEPVPVLKS--KGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYF 250 (645)
T ss_dssp CCE-EEECHHHHCCSSCEEEC--TTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHH
T ss_pred CcE-EEEcccccCCCCceecC--CCCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHH
Confidence 998 89999999999999999 489999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccCCC-------------------------------------ceEEEecchH-HHHHHhh-hhc
Q 003452 339 GKIGLAVAFLVLAVLLKKTDN-------------------------------------TSHVHWKGAA-EMILAMC-SSY 379 (819)
Q Consensus 339 ~~~~l~~a~l~~~v~~~~~~~-------------------------------------~~~~~~KGa~-e~il~~c-~~~ 379 (819)
+++.++++++++++|...... +..+++|+.. -+.+..+ .-+
T Consensus 251 ~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~ 330 (645)
T 3j08_A 251 IPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVI 330 (645)
T ss_dssp HHHHHHHHHHHHHCSSCCCSCSCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEE
Confidence 999999999998876411000 0012344322 1222222 234
Q ss_pred ccccCCccc----------C--CHHHHHH------------HHHHHHHh-hhCCceeeee-ecccCCccc----------
Q 003452 380 YDASGNIKY----------L--DDNEKER------------FQQIIQGM-ASSSLRCIAF-AHKQVPEEE---------- 423 (819)
Q Consensus 380 ~~~~g~~~~----------l--~~~~~~~------------~~~~i~~~-a~~glr~l~~-a~~~~~~~~---------- 423 (819)
+||+|+++. . ++++... +...+..+ ...|+..... .++..+..+
T Consensus 331 fDKTGTLT~~~~~v~~~~~~~~~~~~~l~~aa~~e~~s~hPla~Aiv~~a~~~g~~~~~~~~~~~~~g~g~~~~~v~~g~ 410 (645)
T 3j08_A 331 FDKTGTLTKGKPEVTDLVPLNGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVADGILVGN 410 (645)
T ss_dssp EEGGGTSSSSCCEEEEEEESSSCHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTCCCCSCCCCEEETTTEEEETTEEEEC
T ss_pred EcCcccccCCCeEEEEEEeCCCCHHHHHHHHHHHhhcCCChhHHHHHHHHHhcCCCcCCccceEEecCCceEEEEEEECC
Confidence 789998762 1 1111111 11112111 1222211000 000000000
Q ss_pred --------ccchh--h-----------hhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHH
Q 003452 424 --------HRNEK--D-----------QKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAI 482 (819)
Q Consensus 424 --------~~~~~--~-----------~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~i 482 (819)
..... . .......|++++|+++++|++||+++++|++|+++|++++|+|||+..+|.++
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~i 490 (645)
T 3j08_A 411 KRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAI 490 (645)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHTTTCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHH
T ss_pred HHHHHhcCCCccHHHHHHHHHHHhcCCeEEEEEECCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence 00000 0 00123467899999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhC
Q 003452 483 ATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKET 562 (819)
Q Consensus 483 A~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~A 562 (819)
|+++|+.. ++++++|++|.+.++.++++ +.|+|+|||.||+|||++|
T Consensus 491 a~~lgi~~--------------------------------~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A 537 (645)
T 3j08_A 491 SRELNLDL--------------------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQA 537 (645)
T ss_dssp HHHHTCSE--------------------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHS
T ss_pred HHHcCCCE--------------------------------EEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhC
Confidence 99999974 89999999999999999998 8999999999999999999
Q ss_pred CcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCchhHH
Q 003452 563 DIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYA---GEIPLTAV 639 (819)
Q Consensus 563 dvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~---~~~pl~~~ 639 (819)
|+||||| +|+++++++||+++++|++..+.+++++||++++||+||+.|+++||++.+++++.+.... .-.|..+.
T Consensus 538 ~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la~~~~~~~~g~~l~p~~a~ 616 (645)
T 3j08_A 538 DLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAG 616 (645)
T ss_dssp SEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTCCCSCCHHHHH
T ss_pred CEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhcccccCHHHHH
Confidence 9999999 9999999999999999999999999999999999999999999999999887765542211 13455555
Q ss_pred HHHHHHhhhhhHhHhhh
Q 003452 640 QLLWVNLIMDTLGALAL 656 (819)
Q Consensus 640 qll~vnli~d~l~alal 656 (819)
-.+..+.+...+-++-+
T Consensus 617 ~~m~~ss~~vv~nslrl 633 (645)
T 3j08_A 617 LAMAMSSVSVVANSLLL 633 (645)
T ss_dssp HHHHTHHHHHHHHTTSC
T ss_pred HHHhcchHHHHHhhHHh
Confidence 45555544444444433
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-62 Score=590.61 Aligned_cols=436 Identities=25% Similarity=0.350 Sum_probs=333.1
Q ss_pred hhhHHHHHHHHHHH-HHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEe
Q 003452 180 WYEGGSILVAVFLV-IAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLD 258 (819)
Q Consensus 180 ~~~~~~i~~~v~l~-~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~ 258 (819)
|||+++++++++++ .+++...+.+.++..++|.++. +.+++|+|||++++|+++||+|||+|.|++||+|||||++++
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~-~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~ 251 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQ-AKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE 251 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTS-CSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE
Confidence 77877666554443 3344444444445566666654 447999999999999999999999999999999999999999
Q ss_pred ccceeEecccccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhhH
Q 003452 259 GHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSST 338 (819)
Q Consensus 259 g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~ 338 (819)
|++ .||||+|||||.|+.|. .++.+|+||.+.+|.++++|+++|.+|.+|+|++++++++.+++|+|+.+|+++.++
T Consensus 252 G~~-~VdeS~LTGES~pv~K~--~g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~ 328 (723)
T 3j09_A 252 GES-YVDESMISGEPVPVLKS--KGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYF 328 (723)
T ss_dssp CCE-EEECHHHHCCSSCEEEC--TTCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHH
T ss_pred CCe-EEecccccCCCcceeec--CCCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHH
Confidence 998 89999999999999999 489999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhc----------------------------------------cCCCceEEEecch-HHHHHHhhh
Q 003452 339 GKIGLAVAFLVLAVLLK----------------------------------------KTDNTSHVHWKGA-AEMILAMCS 377 (819)
Q Consensus 339 ~~~~l~~a~l~~~v~~~----------------------------------------~~~~~~~~~~KGa-~e~il~~c~ 377 (819)
+++.+++|++++++|.. .+.| +++|+. .-+.+..++
T Consensus 329 ~~~vl~~a~~~~~~~~~~~~~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~g---ilvk~~~~lE~lg~v~ 405 (723)
T 3j09_A 329 IPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELG---ILIKNADALEVAEKVT 405 (723)
T ss_dssp HHHHHHHHHHHHTTSCSSTTCTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTT---CEESSTTHHHHGGGCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCC---eEEeChHHHHHhhcCC
Confidence 99999999998876641 1111 334432 222233332
Q ss_pred -hcccccCCccc----------C--CHHHHHH------------HHHHHHHh-hhCCceee------------------e
Q 003452 378 -SYYDASGNIKY----------L--DDNEKER------------FQQIIQGM-ASSSLRCI------------------A 413 (819)
Q Consensus 378 -~~~~~~g~~~~----------l--~~~~~~~------------~~~~i~~~-a~~glr~l------------------~ 413 (819)
-.+||+|+++. . ++++... +...+..+ ...|+... .
T Consensus 406 ~i~fDKTGTLT~g~~~v~~~~~~~~~~~~~l~~aa~~e~~s~hP~~~Ai~~~a~~~~~~~~~~~~~~~~~g~g~~~~~~~ 485 (723)
T 3j09_A 406 AVIFDKTGTLTKGKPEVTDLVPLNGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVADGIL 485 (723)
T ss_dssp EEEEEHHHHTSCSCCEEEEEEESSSCHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTCCCCSCCCCEEETTTEEEETTEE
T ss_pred EEEEcCCCccccCceEEEEEEeCCCCHHHHHHHHHHHhccCCCchhHHHHHHHHhcCCCcCCccceEEecCCceEEEEEE
Confidence 34788887652 1 1211111 11111111 12222110 0
Q ss_pred eecccC-Ccccccchhh-------------hhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHH
Q 003452 414 FAHKQV-PEEEHRNEKD-------------QKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTA 479 (819)
Q Consensus 414 ~a~~~~-~~~~~~~~~~-------------~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta 479 (819)
++.+.+ .+........ .......|++++|+++++|++||+++++|++|+++|++++|+|||+..+|
T Consensus 486 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~va~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a 565 (723)
T 3j09_A 486 VGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSA 565 (723)
T ss_dssp EECHHHHHHTTCCCCHHHHHHHHHHHTTTCEEEEEEETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHH
T ss_pred ECCHHHHHhcCCCccHHHHHHHHHHHhcCCeEEEEEECCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHH
Confidence 000000 0000000000 00123467899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHh
Q 003452 480 KAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPAL 559 (819)
Q Consensus 480 ~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL 559 (819)
.++|+++||.. ++++++|+||.++++.++++ +.|+|+|||.||+|||
T Consensus 566 ~~ia~~lgi~~--------------------------------~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al 612 (723)
T 3j09_A 566 EAISRELNLDL--------------------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPAL 612 (723)
T ss_dssp HHHHHHHTCSE--------------------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHH
T ss_pred HHHHHHcCCcE--------------------------------EEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHH
Confidence 99999999974 89999999999999999988 8999999999999999
Q ss_pred hhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCch
Q 003452 560 KETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYA---GEIPL 636 (819)
Q Consensus 560 ~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~---~~~pl 636 (819)
++||+||||| +|+++++++||+++++|++..+.+++++||++++||+||+.|+++||++.+++++.+.... .-.|+
T Consensus 613 ~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~~~~~~~g~~l~p~ 691 (723)
T 3j09_A 613 AQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPE 691 (723)
T ss_dssp HHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCCSCCHH
T ss_pred hhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCHH
Confidence 9999999999 9999999999999999999999999999999999999999999999999888776542221 12455
Q ss_pred hHHHHHHHHhhhhhHhHhhh
Q 003452 637 TAVQLLWVNLIMDTLGALAL 656 (819)
Q Consensus 637 ~~~qll~vnli~d~l~alal 656 (819)
.+.-.+..+.+...+-++-+
T Consensus 692 ~a~~~m~~ss~~vv~nslrl 711 (723)
T 3j09_A 692 FAGLAMAMSSVSVVANSLLL 711 (723)
T ss_dssp HHHHHHHTHHHHHHHHTTSC
T ss_pred HHHHHHhccHHHHHHHHHHh
Confidence 55545555544444444444
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-27 Score=216.26 Aligned_cols=110 Identities=27% Similarity=0.467 Sum_probs=101.2
Q ss_pred HHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCceeeecCCCCCeE
Q 003452 207 QFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESDHVEVNSSQNPFL 286 (819)
Q Consensus 207 ~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~pv~k~~~~~~~l 286 (819)
++++|.++. +..++|+|||++++|++++|+|||+|.|++||+|||||++++|++ .||||+|||||.|+.|. .++.+
T Consensus 2 al~~L~~l~-p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~-~vdeS~LTGEs~pv~k~--~g~~v 77 (113)
T 2hc8_A 2 AIKKLVGLQ-AKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKS--KGDEV 77 (113)
T ss_dssp HHHHHHHHS-CSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEEC--TTCEE
T ss_pred HHHHHhcCC-CCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceE-EEEccccCCCCccEEEC--CCCEE
Confidence 345565554 347999999999999999999999999999999999999999996 99999999999999999 48999
Q ss_pred eeccccccceEEEEEEEeCCcChHHHHHHHhhhc
Q 003452 287 FSGTKVADGYARMLATSVGMNTTWGQMMSQISRD 320 (819)
Q Consensus 287 ~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~ 320 (819)
|+||.|.+|.++++|+++|.+|++|+|+++++++
T Consensus 78 ~aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 78 FGATINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CTTCEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred EeCCEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999765
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-26 Score=215.98 Aligned_cols=116 Identities=26% Similarity=0.422 Sum_probs=103.1
Q ss_pred hhhHHHHHHHHhcccCCcceEEEeCCE------EEEEecCccccCCEEEEecCCeeccceEEEeccceeEecccccCCCc
Q 003452 201 NFTQNRQFDKFSKVSNNIQIDVIRNGR------RQQISIFEIVVGDVICLKIGDQVPANGLFLDGHSLQVDESSMTGESD 274 (819)
Q Consensus 201 ~~~~~~~~~~l~~~~~~~~~~V~RdG~------~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g~~l~VDES~LTGES~ 274 (819)
+++.++++++|.++. +..++|+|+|+ +++|++++|+|||+|.|++||+|||||++++|++ .||||+|||||.
T Consensus 2 ~~ka~~~l~~L~~l~-p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~ 79 (124)
T 2kij_A 2 SFTMSEALAKLISLQ-ATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAM 79 (124)
T ss_dssp ----CCHHHHHHHTC-CSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSS
T ss_pred hHHHHHHHHHHhccC-CCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCc
Confidence 355667778887765 45899999764 6899999999999999999999999999999998 999999999999
Q ss_pred eeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhc
Q 003452 275 HVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRD 320 (819)
Q Consensus 275 pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~ 320 (819)
|+.|. .++.+|+||.|.+|.++++|+++|.+|++|+|+++++++
T Consensus 80 pv~k~--~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 80 PVAKK--PGSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp CEECC--TTEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred cEEeC--CCCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 99999 489999999999999999999999999999999998764
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=8.7e-21 Score=200.91 Aligned_cols=141 Identities=27% Similarity=0.445 Sum_probs=133.1
Q ss_pred cCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHH
Q 003452 436 DNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERM 515 (819)
Q Consensus 436 ~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~ 515 (819)
.+..+.|.+.+.|+++|++.++++.|++.|+++.|+|||+..++..+++++|+..
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~------------------------- 177 (263)
T 2yj3_A 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE------------------------- 177 (263)
Confidence 4557889999999999999999999999999999999999999999999999865
Q ss_pred HHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHH
Q 003452 516 EKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 516 ~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
+|+...|++|...++.++..++.|+|+|||.||++|++.||+|+++| ++++.+++.+|++++++++..+.++
T Consensus 178 -------~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~ 249 (263)
T 2yj3_A 178 -------YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGL 249 (263)
Confidence 57777799999999999999899999999999999999999999999 7899999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 003452 596 LRWGRCVHTNIQKL 609 (819)
Q Consensus 596 i~~gR~~~~ni~k~ 609 (819)
++.+|+++++|++|
T Consensus 250 l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 250 IKNRKRLSNAIPSN 263 (263)
Confidence 99999999999986
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.77 E-value=9.6e-20 Score=196.28 Aligned_cols=145 Identities=12% Similarity=0.093 Sum_probs=115.1
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCC-Cccceecccccc-cCCHHHHHHHhhhhcee
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDT-STGAVLEGEEFR-NYTHEERMEKVDKICVM 524 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~-~~~~vi~g~~~~-~~~~~~~~~~~~~~~v~ 524 (819)
.+++||+++++++.|+++|+++.|+|||+..++.++|+++|+..++... ......+...+. ... .+.+.++
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~-------~~~i~~~ 211 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFK-------GELIHVF 211 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEEC-------SSCCCTT
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEecc-------ccccchh
Confidence 5799999999999999999999999999999999999999997642110 000011111110 000 0122357
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHh---hhCCcceeeCC------CChHHHHhhcCEEEeCCChhHHHHH
Q 003452 525 ARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPAL---KETDIGLSMGI------QGTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 525 ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL---~~AdvGIamg~------~gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
++..|.+|...+..+++.++.|+|+|||+||+||+ +.||+||+||. ++++++++++||||+||++..++.+
T Consensus 212 ~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~ 291 (297)
T 4fe3_A 212 NKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 291 (297)
T ss_dssp CHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred hcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHH
Confidence 88889999999999999999999999999999995 59999999995 6788899999999999999999988
Q ss_pred HHH
Q 003452 596 LRW 598 (819)
Q Consensus 596 i~~ 598 (819)
|..
T Consensus 292 il~ 294 (297)
T 4fe3_A 292 ILQ 294 (297)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-16 Score=168.92 Aligned_cols=145 Identities=33% Similarity=0.517 Sum_probs=125.8
Q ss_pred CcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHH
Q 003452 437 NLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERME 516 (819)
Q Consensus 437 ~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~ 516 (819)
+..++|.+.+.|+++|++.++++.|++.|+++.++||++...+..+++++|+..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 185 (280)
T 3skx_A 132 NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD-------------------------- 185 (280)
T ss_dssp TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------
T ss_pred CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh--------------------------
Confidence 457889999999999999999999999999999999999999999999999865
Q ss_pred HhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 517 KVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 517 ~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
.|....|.+|...++.+.+..+ ++|+||+.||++|++.|++|++|| ++++..++.||+++..+++..+.+++
T Consensus 186 ------~f~~~~~~~k~~~~k~~~~~~~-~~~vGD~~nDi~~~~~Ag~~va~~-~~~~~~~~~a~~~~~~~~~~~l~~~l 257 (280)
T 3skx_A 186 ------YFAEVLPHEKAEKVKEVQQKYV-TAMVGDGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIV 257 (280)
T ss_dssp ------EECSCCGGGHHHHHHHHHTTSC-EEEEECTTTTHHHHHHSSEEEECS-CCSSSCCCSSSEECSSCCTHHHHHHH
T ss_pred ------HhHhcCHHHHHHHHHHHHhcCC-EEEEeCCchhHHHHHhCCceEEec-CCcHHHHhhCCEEEeCCCHHHHHHHH
Confidence 5788889999999999988764 589999999999999999999999 88899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 003452 597 RWGRCVHTNIQKLIQFQLT 615 (819)
Q Consensus 597 ~~gR~~~~ni~k~i~f~l~ 615 (819)
+.+|++++++++|+.|++.
T Consensus 258 ~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 258 ELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHHTCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999988764
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.61 E-value=3.7e-15 Score=159.47 Aligned_cols=157 Identities=32% Similarity=0.507 Sum_probs=133.8
Q ss_pred HHHHHHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCH
Q 003452 397 FQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNV 476 (819)
Q Consensus 397 ~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~ 476 (819)
+.+..+.+..+|.+++.+++. .++.+.+...++++|++.++++.|+++|+++.++||++.
T Consensus 131 ~~~~~~~~~~~g~~~i~~~~d--------------------~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~ 190 (287)
T 3a1c_A 131 VELALEKLEREAKTAVIVARN--------------------GRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNW 190 (287)
T ss_dssp HHHHHHHHHHTTCEEEEEEET--------------------TEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCH
T ss_pred HHHHHHHHHhCCCeEEEEEEC--------------------CEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCH
Confidence 344566777889999888742 367788889999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCH
Q 003452 477 FTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDA 556 (819)
Q Consensus 477 ~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~ 556 (819)
..+..+++.+|+.. .|....|+.|...++.+... +.++|+||+.||+
T Consensus 191 ~~~~~~l~~~gl~~--------------------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di 237 (287)
T 3a1c_A 191 RSAEAISRELNLDL--------------------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDA 237 (287)
T ss_dssp HHHHHHHHHHTCSE--------------------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCH
T ss_pred HHHHHHHHHhCCce--------------------------------eeeecChHHHHHHHHHHhcC-CeEEEEECCHHHH
Confidence 99999999999864 56777799999999999888 8899999999999
Q ss_pred HHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHHH
Q 003452 557 PALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQ 607 (819)
Q Consensus 557 ~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni~ 607 (819)
+|.+.|+++++++ ++.+..++.+|+++.++++..+.++++.+|+++++|+
T Consensus 238 ~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 238 PALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 9999999999998 6777778889999988899999999999999999885
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.44 E-value=8e-14 Score=139.72 Aligned_cols=126 Identities=14% Similarity=0.183 Sum_probs=108.4
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHH
Q 003452 457 AVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMV 536 (819)
Q Consensus 457 aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV 536 (819)
+++.|+++|+++.++||++...+..+++++|+.. +|... .+|...+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~--------------------------------~f~~~--~~K~~~~ 99 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH--------------------------------LFQGR--EDKLVVL 99 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE--------------------------------EECSC--SCHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH--------------------------------HhcCc--CChHHHH
Confidence 9999999999999999999999999999999965 33333 5676777
Q ss_pred HHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCC----hhHHHHHHHHHHHHHHHHHH
Q 003452 537 QCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN----FASVARVLRWGRCVHTNIQK 608 (819)
Q Consensus 537 ~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~----f~~i~~~i~~gR~~~~ni~k 608 (819)
+.+.++ .+.++|+||+.||.+|++.|++|++++ ++.+.+++.||+++.+++ +..+.+.+..+|.++.++++
T Consensus 100 ~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~ 178 (189)
T 3mn1_A 100 DKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHS 178 (189)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHH
Confidence 666554 467999999999999999999999999 789999999999998763 77788999999999999999
Q ss_pred HHHHHHHHH
Q 003452 609 LIQFQLTAN 617 (819)
Q Consensus 609 ~i~f~l~~n 617 (819)
++.|++.+|
T Consensus 179 ~~~~~~~~~ 187 (189)
T 3mn1_A 179 VYLEGHHHH 187 (189)
T ss_dssp TTSTTC---
T ss_pred HHhcccccc
Confidence 999999887
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.29 E-value=2e-12 Score=141.36 Aligned_cols=154 Identities=13% Similarity=0.156 Sum_probs=110.5
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCC--CccceecccccccCCHHHHHHHhhhhceecc
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDT--STGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~--~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
+++|++.+.++.|+++|+++.++||+....+..+++++|+....... .....++|...... ..++
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~-------------~~~k 244 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEV-------------VSAQ 244 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCC-------------CCHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccc-------------cChh
Confidence 78999999999999999999999999999999999999986420000 00000111100000 1122
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHHHHHH
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNI 606 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~~~ni 606 (819)
..|+-...+.+.+.-..+.++|+|||.||.+|++.|++|++| ++.+..++.||.++..+++.++..+++.......++
T Consensus 245 pk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~ 322 (335)
T 3n28_A 245 TKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKL 322 (335)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCC
T ss_pred hhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhh
Confidence 334444444444444457799999999999999999999999 688999999999999999999999999988888899
Q ss_pred HHHHHHHHHHH
Q 003452 607 QKLIQFQLTAN 617 (819)
Q Consensus 607 ~k~i~f~l~~n 617 (819)
++|+.|.+.||
T Consensus 323 ~~~~~~~~~~~ 333 (335)
T 3n28_A 323 SWKSKEGHHHH 333 (335)
T ss_dssp CCC--------
T ss_pred ccccccccccc
Confidence 99999999887
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=4.6e-11 Score=118.42 Aligned_cols=131 Identities=12% Similarity=0.117 Sum_probs=103.9
Q ss_pred CccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHh
Q 003452 451 RPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPF 530 (819)
Q Consensus 451 r~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 530 (819)
.++..++++.|+++|+++.++||++...+..+++++|+.. .|... .
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------~~~~~--k 82 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------FFLGK--L 82 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE--------------------------------EEESC--S
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce--------------------------------eecCC--C
Confidence 4567799999999999999999999999999999999864 22222 3
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHH----HHHHHHHHH
Q 003452 531 DKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVA----RVLRWGRCV 602 (819)
Q Consensus 531 ~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~----~~i~~gR~~ 602 (819)
.|...++.+.++ | +.++|+||+.||.+|++.|+++++|+ ++.+..++.||+++.+++..++. +.+...|..
T Consensus 83 ~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~ 161 (180)
T 1k1e_A 83 EKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGK 161 (180)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCc
Confidence 456665554433 4 67999999999999999999999998 88899999999999887655554 444446777
Q ss_pred HHHHHHHHHHHHHH
Q 003452 603 HTNIQKLIQFQLTA 616 (819)
Q Consensus 603 ~~ni~k~i~f~l~~ 616 (819)
+.+++.++.|....
T Consensus 162 ~~~~~~~~~~~~~~ 175 (180)
T 1k1e_A 162 SSVFDTAQGFLKSV 175 (180)
T ss_dssp THHHHCHHHHHHHG
T ss_pred hhhhhhccchhhhh
Confidence 88888887776543
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.17 E-value=6.1e-11 Score=122.22 Aligned_cols=149 Identities=15% Similarity=0.165 Sum_probs=107.8
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccee--ccccc-ccC---------------
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVL--EGEEF-RNY--------------- 509 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi--~g~~~-~~~--------------- 509 (819)
..+.+++.++|++|+++|+++.++||++...+..+++++|+..+-...+++.+. +|+.+ ...
T Consensus 21 ~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~ 100 (227)
T 1l6r_A 21 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT 100 (227)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHh
Confidence 357789999999999999999999999999999999999986432112233333 23322 000
Q ss_pred ----------------------CHHHHHHHhh--hhcee-----ccCCH--hhHHHHHHHHHhC-C---CEEEEEcCCCC
Q 003452 510 ----------------------THEERMEKVD--KICVM-----ARSSP--FDKLLMVQCLKQK-G---HVVAVTRDGTN 554 (819)
Q Consensus 510 ----------------------~~~~~~~~~~--~~~v~-----ar~sP--~~K~~iV~~L~~~-g---~~Va~~GDG~N 554 (819)
..+++.+... .+.+. ....| .+|...++.+.++ | +.++++||+.|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~n 180 (227)
T 1l6r_A 101 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN 180 (227)
T ss_dssp SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred cCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHH
Confidence 1111111111 12221 11224 5899888888764 2 56899999999
Q ss_pred CHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 555 DAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 555 D~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
|.+|++.|++|++|+ ++.+..|+.||+++.+++-.++.++++
T Consensus 181 D~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~ 222 (227)
T 1l6r_A 181 DMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFK 222 (227)
T ss_dssp GHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHH
T ss_pred hHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHH
Confidence 999999999999999 889999999999999888888888876
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.14 E-value=7.3e-11 Score=118.33 Aligned_cols=124 Identities=12% Similarity=0.074 Sum_probs=102.0
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc--CCHhhHHH
Q 003452 457 AVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR--SSPFDKLL 534 (819)
Q Consensus 457 aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar--~sP~~K~~ 534 (819)
+++.|+++|+++.++||++...+..+++++|+.. ++.. ..|+-...
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~--------------------------------~~~~~kpk~~~~~~ 101 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH--------------------------------YYKGQVDKRSAYQH 101 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE--------------------------------EECSCSSCHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc--------------------------------ceeCCCChHHHHHH
Confidence 5999999999999999999999999999999975 2332 34555556
Q ss_pred HHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCC----hhHHHHHHHHHHHHHHHHHHHH
Q 003452 535 MVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN----FASVARVLRWGRCVHTNIQKLI 610 (819)
Q Consensus 535 iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~----f~~i~~~i~~gR~~~~ni~k~i 610 (819)
+++.+.-..+.++|+||+.||.+|++.|+++++|+ ++.+..++.||+++.+++ +..+.+.+...|..+.++.++.
T Consensus 102 ~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~ 180 (191)
T 3n1u_A 102 LKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGY 180 (191)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHH
Confidence 66666555667999999999999999999999999 888999999999999877 5556677777888888877765
Q ss_pred HHH
Q 003452 611 QFQ 613 (819)
Q Consensus 611 ~f~ 613 (819)
.++
T Consensus 181 ~~~ 183 (191)
T 3n1u_A 181 LKQ 183 (191)
T ss_dssp HTC
T ss_pred Hhc
Confidence 543
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.14 E-value=5.1e-11 Score=117.01 Aligned_cols=88 Identities=27% Similarity=0.411 Sum_probs=74.5
Q ss_pred CCCceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhhhhhhccc
Q 003452 357 TDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIED 436 (819)
Q Consensus 357 ~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~ 436 (819)
++++..+++|||||.|+++|+.+. .+|...|++++.++.+.+.++.|+++|+|||++|||.++..... .....|+
T Consensus 78 ~~g~~~l~~KGApE~IL~~C~~~~-~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~----~~~~~E~ 152 (170)
T 3gwi_A 78 NTEHHQLVCKGALQEILNVCSQVR-HNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD----YQRADES 152 (170)
T ss_dssp SSSEEEEEEEECHHHHHTTEEEEE-ETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC----CCGGGSC
T ss_pred CCCCEEEEEcCCcHHHHHHhHHHh-cCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc----cCccccC
Confidence 456678999999999999999875 48899999999999999999999999999999999998654321 1123689
Q ss_pred CcEEEEEEEeeCC
Q 003452 437 NLTLLGLVGIKDP 449 (819)
Q Consensus 437 ~l~~lG~v~i~D~ 449 (819)
||+|+|++||-|.
T Consensus 153 ~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 153 DLILEGYIAFLDH 165 (170)
T ss_dssp SEEEEEEEEEEC-
T ss_pred CcEEEehhccccc
Confidence 9999999999885
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.4e-10 Score=116.66 Aligned_cols=112 Identities=18% Similarity=0.177 Sum_probs=89.1
Q ss_pred HHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHH
Q 003452 455 KKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLL 534 (819)
Q Consensus 455 ~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 534 (819)
..+++.|+++|+++.++||++...+..+++++|+.. +|... ..|..
T Consensus 58 ~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~--------------------------------~~~~~--k~k~~ 103 (195)
T 3n07_A 58 GYGVKALMNAGIEIAIITGRRSQIVENRMKALGISL--------------------------------IYQGQ--DDKVQ 103 (195)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE--------------------------------EECSC--SSHHH
T ss_pred HHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE--------------------------------EeeCC--CCcHH
Confidence 346999999999999999999999999999999974 34333 34666
Q ss_pred HHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhH----HHHHHHHHHH
Q 003452 535 MVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFAS----VARVLRWGRC 601 (819)
Q Consensus 535 iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~----i~~~i~~gR~ 601 (819)
.++.+.++ .+.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++-.+ +.+.+...|.
T Consensus 104 ~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~ 177 (195)
T 3n07_A 104 AYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAVREVCDLILQARN 177 (195)
T ss_dssp HHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcc
Confidence 66555443 467999999999999999999999999 899999999999998766444 4444444443
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.06 E-value=2.3e-10 Score=116.56 Aligned_cols=97 Identities=16% Similarity=0.186 Sum_probs=85.0
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHH
Q 003452 457 AVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMV 536 (819)
Q Consensus 457 aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV 536 (819)
+++.|+++|+++.++||++...+..+++++|+.. +|... .+|...+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~--------------------------------~f~~~--k~K~~~l 129 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH--------------------------------LYQGQ--SDKLVAY 129 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE--------------------------------EECSC--SSHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch--------------------------------hhccc--CChHHHH
Confidence 9999999999999999999999999999999965 34444 5677777
Q ss_pred HHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCC
Q 003452 537 QCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588 (819)
Q Consensus 537 ~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~ 588 (819)
+.+.++ .+.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++
T Consensus 130 ~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~ 184 (211)
T 3ij5_A 130 HELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKG 184 (211)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCT
T ss_pred HHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCC
Confidence 766554 578999999999999999999999999 788999999999998764
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.05 E-value=2.4e-10 Score=112.89 Aligned_cols=113 Identities=12% Similarity=0.073 Sum_probs=88.6
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHH
Q 003452 457 AVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMV 536 (819)
Q Consensus 457 aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV 536 (819)
+++.|+++|+++.++||++...+..+++++|+. . ++.. ..|...+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~--------------------------------~~~~--~~k~~~l 91 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-V--------------------------------LHGI--DRKDLAL 91 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-E--------------------------------EESC--SCHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-e--------------------------------EeCC--CChHHHH
Confidence 899999999999999999999999999999985 1 2222 4566666
Q ss_pred HHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhH----HHHHHHHHHHHHHH
Q 003452 537 QCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFAS----VARVLRWGRCVHTN 605 (819)
Q Consensus 537 ~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~----i~~~i~~gR~~~~n 605 (819)
+.+.++ .+.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++..+ +.+.+...|..+.+
T Consensus 92 ~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~l~~~~~~~~~ 167 (176)
T 3mmz_A 92 KQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREIASWILGPSLDSLD 167 (176)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTTTTC---
T ss_pred HHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcccc
Confidence 665544 367899999999999999999999999 789999999999999877554 44444434443333
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.01 E-value=2.7e-10 Score=111.71 Aligned_cols=112 Identities=13% Similarity=0.113 Sum_probs=89.7
Q ss_pred cCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHH--HcCCCCCCCCCCccceecccccccCCHHH
Q 003452 436 DNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIAT--ECGILKPGQDTSTGAVLEGEEFRNYTHEE 513 (819)
Q Consensus 436 ~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~--~~GI~~~~~~~~~~~vi~g~~~~~~~~~~ 513 (819)
.+...++.+.++|. .+|+.|++.|+++.++||+ ..+..+++ ++|+.
T Consensus 29 ~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------ 76 (168)
T 3ewi_A 29 GDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------ 76 (168)
T ss_dssp SSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC------------------------
T ss_pred CCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE------------------------
Confidence 33456777777776 3899999999999999999 67888888 55653
Q ss_pred HHHHhhhhceeccCCHhhHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCCh
Q 003452 514 RMEKVDKICVMARSSPFDKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNF 589 (819)
Q Consensus 514 ~~~~~~~~~v~ar~sP~~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f 589 (819)
++.. +.+|...++.+.++ .+.++|+||+.||.+|++.|+++++|+ ++.+.+++.||+++.+++-
T Consensus 77 ---------~~~g--~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~~~~ 144 (168)
T 3ewi_A 77 ---------TEVS--VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKCSGG 144 (168)
T ss_dssp ---------EECS--CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSSCTT
T ss_pred ---------EEEC--CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCCCCC
Confidence 1211 24687777776654 357999999999999999999999999 8999999999999987665
Q ss_pred hH
Q 003452 590 AS 591 (819)
Q Consensus 590 ~~ 591 (819)
.+
T Consensus 145 ~G 146 (168)
T 3ewi_A 145 RG 146 (168)
T ss_dssp TT
T ss_pred cc
Confidence 54
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=5.4e-10 Score=108.50 Aligned_cols=100 Identities=19% Similarity=0.141 Sum_probs=82.6
Q ss_pred HHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHH
Q 003452 457 AVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMV 536 (819)
Q Consensus 457 aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV 536 (819)
+++.|+++|+++.++||++...+..+++++|+.. .+... ..|...+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------------------------------~~~~~--kpk~~~~ 84 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY--------------------------------LFQGV--VDKLSAA 84 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE--------------------------------EECSC--SCHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE--------------------------------eeccc--CChHHHH
Confidence 8999999999999999999999999999999875 23322 2344444
Q ss_pred HHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhH
Q 003452 537 QCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFAS 591 (819)
Q Consensus 537 ~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~ 591 (819)
+.+.++ .+.++|+||+.||.++++.|+++++++ ++.+..++.||+++.+++..+
T Consensus 85 ~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g 142 (164)
T 3e8m_A 85 EELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEG 142 (164)
T ss_dssp HHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTT
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCc
Confidence 443332 457999999999999999999999999 899999999999999888444
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.85 E-value=1.1e-08 Score=108.56 Aligned_cols=68 Identities=19% Similarity=0.270 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 530 FDKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 530 ~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
.+|...++.+.++ | +.|+++||+.||.+|++.|++|+||| ++.+..|+.||+|..+++-.++.++++.
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 3577777777654 2 46899999999999999999999999 9999999999999998888889988874
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.82 E-value=7.1e-09 Score=109.49 Aligned_cols=67 Identities=28% Similarity=0.425 Sum_probs=58.5
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 531 DKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 531 ~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
+|...++.+.++ .+.|+++||+.||.+|++.|++|++|| ++.+..|++||+|+.+++-.++.++++.
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDEDGVAEAIER 267 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCcHHHHHHHH
Confidence 677777776654 346899999999999999999999999 9999999999999998888899888864
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.81 E-value=6.7e-09 Score=116.77 Aligned_cols=139 Identities=16% Similarity=0.192 Sum_probs=106.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCC--CccceecccccccCCHHHHHHHhhhhceecc
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDT--STGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~--~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+....... .....++|.... .-
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~-----------------~v 318 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVG-----------------PI 318 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECS-----------------SC
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEcc-----------------CC
Confidence 79999999999999999999999999999999999999996321000 000011111100 11
Q ss_pred CCHhhHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHHHH
Q 003452 527 SSPFDKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCV 602 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR~~ 602 (819)
..+..|..+++.+.++ | +.+.|+|||.||.+|++.|++|+++ ++.+..++.||+++..+++..+..++.++|.-
T Consensus 319 ~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~ 396 (415)
T 3p96_A 319 IDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGE 396 (415)
T ss_dssp CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHH
T ss_pred CCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHH
Confidence 2256777777666544 3 5689999999999999999999999 47788899999999999999999999988776
Q ss_pred HHHH
Q 003452 603 HTNI 606 (819)
Q Consensus 603 ~~ni 606 (819)
+.+.
T Consensus 397 ~~~~ 400 (415)
T 3p96_A 397 IEAA 400 (415)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5543
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.79 E-value=5.9e-09 Score=105.06 Aligned_cols=133 Identities=17% Similarity=0.142 Sum_probs=96.1
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccc--cccCCHHHHHHHhhhhceec
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEE--FRNYTHEERMEKVDKICVMA 525 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~--~~~~~~~~~~~~~~~~~v~a 525 (819)
-+++|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.-.+ +.. .+..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f-----~~~~~~~~~~~~~-------------~~~~ 135 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF-----SNTLIVENDALNG-------------LVTG 135 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE-----EEEEEEETTEEEE-------------EEEE
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc-----cceeEEeCCEEEe-------------eecc
Confidence 468999999999999999999999999999999999999986421 11111000 000 0000
Q ss_pred -cCCHhhHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHH
Q 003452 526 -RSSPFDKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGR 600 (819)
Q Consensus 526 -r~sP~~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR 600 (819)
-..+..|...++.+.++ .+.+.++||+.||.+|++.|+++++| ++.+..++.||+++.++++..+..++.|-+
T Consensus 136 ~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~~~ 213 (217)
T 3m1y_A 136 HMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEGHH 213 (217)
T ss_dssp SCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC-----
T ss_pred CCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhcccc
Confidence 01234556666555443 35688999999999999999999999 577888999999999999999988887643
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.75 E-value=3.6e-08 Score=104.74 Aligned_cols=67 Identities=25% Similarity=0.243 Sum_probs=57.0
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCE--EEeCCChhHHHHHHH
Q 003452 530 FDKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDI--VILDDNFASVARVLR 597 (819)
Q Consensus 530 ~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDi--vl~dd~f~~i~~~i~ 597 (819)
.+|...++.+.+. | +.++++||+.||.+|++.|++|+||| ++.+..|++||. +..+++-.+|.++++
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGva~~i~ 280 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAVPRYLR 280 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchHHHHHH
Confidence 3588888877654 3 46899999999999999999999999 999999999984 667778888888776
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.74 E-value=1.8e-08 Score=106.96 Aligned_cols=66 Identities=17% Similarity=0.156 Sum_probs=58.4
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
+|...++.+.++ | +.|+++||+.||.+|++.|++|+||| ++.+..|+.||+|..+++-.+|.++++
T Consensus 211 ~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~ 280 (283)
T 3dao_A 211 SKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLK 280 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHH
T ss_pred cHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHH
Confidence 588888777654 3 45899999999999999999999999 999999999999999888889988876
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.74 E-value=1.8e-08 Score=109.75 Aligned_cols=147 Identities=16% Similarity=0.169 Sum_probs=100.2
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccc------------------cccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEE------------------FRNYT 510 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~------------------~~~~~ 510 (819)
++++++.++++.|++ |+.+.++||++...+..+.+.+|+.... ....+.... +....
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 177 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGEL----HGTEVDFDSIAVPEGLREELLSIIDVIASLSG 177 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEE----EEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhh----cccccchhhhccccccceeEEecCHHHHhhhh
Confidence 679999999999999 9999999999977777778887774210 000000000 00000
Q ss_pred HHHHHHHhhhh-------cee---ccCCHhhHHHHHHHHHhCC--CEEEEEcCCCCCHHHhhhC----CcceeeCCCChH
Q 003452 511 HEERMEKVDKI-------CVM---ARSSPFDKLLMVQCLKQKG--HVVAVTRDGTNDAPALKET----DIGLSMGIQGTE 574 (819)
Q Consensus 511 ~~~~~~~~~~~-------~v~---ar~sP~~K~~iV~~L~~~g--~~Va~~GDG~ND~~aL~~A----dvGIamg~~gt~ 574 (819)
++++ +.++++ .+. --..+.+|...++.+.... +.|+++|||.||++|++.| ++|+|| ++.+
T Consensus 178 ~~~l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~ 254 (332)
T 1y8a_A 178 EELF-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNE 254 (332)
T ss_dssp HHHH-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCH
T ss_pred HHHH-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCH
Confidence 0111 111110 011 1123567988888776543 5589999999999999999 999999 6899
Q ss_pred HHHhhcCEEEeCCChhHHHHHHH----HHHHHH
Q 003452 575 VAKESSDIVILDDNFASVARVLR----WGRCVH 603 (819)
Q Consensus 575 ~ak~aaDivl~dd~f~~i~~~i~----~gR~~~ 603 (819)
.+|+.||+++.+++..++..+++ .||..+
T Consensus 255 ~lk~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~ 287 (332)
T 1y8a_A 255 YALKHADVVIISPTAMSEAKVIELFMERKERAF 287 (332)
T ss_dssp HHHTTCSEEEECSSTHHHHHHHHHHHHHGGGGG
T ss_pred HHHhhCcEEecCCCCCHHHHHHHHHHHcCCchh
Confidence 99999999999989977776654 355544
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.70 E-value=4.4e-08 Score=100.76 Aligned_cols=149 Identities=19% Similarity=0.187 Sum_probs=102.2
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceec-ccccc--------------------
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLE-GEEFR-------------------- 507 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~-g~~~~-------------------- 507 (819)
.+.+.+.+++++++++|+++.++||++...+..+.+++|+..+....++..+.. |+.+.
T Consensus 20 ~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~~ 99 (231)
T 1wr8_A 20 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 99 (231)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCCC
Confidence 466889999999999999999999999999999999999854211111111111 11000
Q ss_pred -------------------cCCHHHHHHHhhh----hcee-----ccCC--HhhHHHHHHHHHhC----CCEEEEEcCCC
Q 003452 508 -------------------NYTHEERMEKVDK----ICVM-----ARSS--PFDKLLMVQCLKQK----GHVVAVTRDGT 553 (819)
Q Consensus 508 -------------------~~~~~~~~~~~~~----~~v~-----ar~s--P~~K~~iV~~L~~~----g~~Va~~GDG~ 553 (819)
+...+...+..++ +.+. .... ...|...++.+.++ .+.++++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~ 179 (231)
T 1wr8_A 100 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 179 (231)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 0022222222221 2222 1111 23687777777654 25688999999
Q ss_pred CCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 554 NDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 554 ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
||.+|++.|+++++|+ ++.+..++.||+++.+.+-.++.++++.
T Consensus 180 nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 180 NDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp GGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 9999999999999999 7888889999999987777778877753
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.69 E-value=2.2e-08 Score=105.67 Aligned_cols=66 Identities=27% Similarity=0.341 Sum_probs=47.6
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
+|...++.+.++ | +.++++||+.||.+|++.|++|+||| ++.+..|+.||+|..+++-.+|.++++
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENGVAAAIR 266 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------CHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccHHHHHHH
Confidence 488877777654 2 46899999999999999999999999 999999999999998888888888775
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.68 E-value=1.5e-08 Score=108.86 Aligned_cols=67 Identities=19% Similarity=0.230 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 530 FDKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 530 ~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
..|...++.+.++ | +.++++||+.||.+|++.|++|+||| ++.+..|+.||+|..+++-.++.++++
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~ 297 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVID 297 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHH
Confidence 4688788777654 3 45899999999999999999999999 999999999999999888888988886
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=3.2e-08 Score=98.52 Aligned_cols=107 Identities=16% Similarity=0.186 Sum_probs=84.5
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHH
Q 003452 456 KAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLM 535 (819)
Q Consensus 456 ~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~i 535 (819)
.+++.|+++|+++.++||++...+..+++++|+.. +|... ..|...
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~--------------------------------~~~~~--kpk~~~ 105 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH--------------------------------LYQGQ--SNKLIA 105 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE--------------------------------EECSC--SCSHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce--------------------------------eecCC--CCCHHH
Confidence 48999999999999999999999999999999864 23222 234444
Q ss_pred HHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHH-HHHH
Q 003452 536 VQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVA-RVLR 597 (819)
Q Consensus 536 V~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~-~~i~ 597 (819)
++.+.++ | +.++|+||+.||.++++.|+++++++ ++.+..++.||+++.+.+-.+++ ++++
T Consensus 106 ~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 106 FSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 4444332 3 57999999999999999999999998 77788888999999877555555 5554
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=2.1e-08 Score=100.15 Aligned_cols=129 Identities=14% Similarity=0.221 Sum_probs=90.2
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc-
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR- 526 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar- 526 (819)
-++.|++.++++.|++.|+++.++||+....+..+.+.+|+.... ..........+. ..+...
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-------------~~~~~~~ 138 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAF---ANRLIVKDGKLT-------------GDVEGEV 138 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEE---EEEEEEETTEEE-------------EEEECSS
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEE---EeeeEEECCEEc-------------CCcccCc
Confidence 356789999999999999999999999999888888998874210 000001000000 001001
Q ss_pred CCHhhHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHH
Q 003452 527 SSPFDKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVAR 594 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~ 594 (819)
..+..|...+..+.++ | +.++++||+.||.+|++.|+++++|+ +.+..++.||+++.++++..+..
T Consensus 139 ~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp CSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred cCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 1235676666555443 3 45899999999999999999999998 45667889999998777877654
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.68 E-value=1.5e-08 Score=109.64 Aligned_cols=131 Identities=14% Similarity=0.180 Sum_probs=96.2
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceec-cC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA-RS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a-r~ 527 (819)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+...-. .....++..+... +.. -.
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~---~~l~~~dg~~tg~-------------i~~~~~ 242 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFS---NTVEIRDNVLTDN-------------ITLPIM 242 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE---ECEEEETTEEEEE-------------ECSSCC
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEE---EEEEeeCCeeeee-------------EecccC
Confidence 589999999999999999999999999999999999999964210 0011111100000 000 11
Q ss_pred CHhhHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 528 sP~~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
.+..|..+++.+.++ .+.+.|+||+.||.+|++.|++|++++ +.+..++.||.++..+++..+..+++
T Consensus 243 ~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 243 NAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp CHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 345566666555432 356999999999999999999999995 67788889999999889998877654
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.67 E-value=1.4e-07 Score=98.42 Aligned_cols=212 Identities=17% Similarity=0.124 Sum_probs=117.4
Q ss_pred ccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhhh-hhhcccCcEEE---EEEEeeC-CCCccH
Q 003452 380 YDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQ-KKLIEDNLTLL---GLVGIKD-PCRPGV 454 (819)
Q Consensus 380 ~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~-~~~~e~~l~~l---G~v~i~D-~lr~~v 454 (819)
+|-|||+..-+....+...+.++.+..+|.++....-|....-........ ...+..+..++ |-+..+. -.++.+
T Consensus 8 ~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~~~~~~~~~~ 87 (258)
T 2pq0_A 8 FDIDGTLLDEQKQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQPLRREKV 87 (258)
T ss_dssp ECTBTTTBCTTSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEEECCCCHHHH
T ss_pred EeCCCCCcCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEEEecCCHHHH
Confidence 566777654222223345566777778898866544444321100000000 00011111111 1112223 346778
Q ss_pred HHHHHHHHhcCCcEEEEcCCC--------HHHHHHHHHHcCCCCCCCCC-------CccceecccccccCCHHHHHHHhh
Q 003452 455 KKAVEDCQYAGVNIKMITGDN--------VFTAKAIATECGILKPGQDT-------STGAVLEGEEFRNYTHEERMEKVD 519 (819)
Q Consensus 455 ~~aI~~l~~aGI~v~mlTGD~--------~~ta~~iA~~~GI~~~~~~~-------~~~~vi~g~~~~~~~~~~~~~~~~ 519 (819)
.+.++.+++.|+.+.+.|++. ... .......+........ ....++.+.+- ..+.+.+..+
T Consensus 88 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~~ 163 (258)
T 2pq0_A 88 RALTEEAHKNGHPLVFMDAEKMRASIGDHPHI-HVSMASLKFAHPPVDPLYYENKDIYQALLFCRAE---EEEPYVRNYP 163 (258)
T ss_dssp HHHHHHHHHTTCCEEEECSSCEEESSSSCHHH-HHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCHH---HHHHHHHHCT
T ss_pred HHHHHHHHhCCCeEEEEeCCcEEEecCCcHHH-HHHHHhhcCCccccccchhhccCceEEEEECCHH---HHHHHHHhCC
Confidence 999999999999988888776 221 2222333322110000 00111111100 0111222222
Q ss_pred hhceeccCCH---------hhHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeC
Q 003452 520 KICVMARSSP---------FDKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILD 586 (819)
Q Consensus 520 ~~~v~ar~sP---------~~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~d 586 (819)
++.+ .+..| .+|...++.+.+. .+.++++||+.||.+|++.|++|++|| ++.+..|+.||+|..+
T Consensus 164 ~~~~-~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~ 241 (258)
T 2pq0_A 164 EFRF-VRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKP 241 (258)
T ss_dssp TEEE-EEEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECC
T ss_pred CeEE-EEeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCC
Confidence 2221 11122 2688888777654 356889999999999999999999999 8999999999999988
Q ss_pred CChhHHHHHHH
Q 003452 587 DNFASVARVLR 597 (819)
Q Consensus 587 d~f~~i~~~i~ 597 (819)
++-.++.++++
T Consensus 242 ~~~dGva~~i~ 252 (258)
T 2pq0_A 242 VDKEGIWYGLK 252 (258)
T ss_dssp GGGTHHHHHHH
T ss_pred CCcchHHHHHH
Confidence 88889988876
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.66 E-value=3.9e-08 Score=103.22 Aligned_cols=67 Identities=16% Similarity=0.202 Sum_probs=58.4
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 531 DKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 531 ~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
+|...++.+.++ .+.++++||+.||.+|++.|++|++|| ++.+..|+.||++..+++-.++.++++.
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 577777766554 356899999999999999999999999 8999999999999998888899988864
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.62 E-value=1.1e-07 Score=99.52 Aligned_cols=219 Identities=16% Similarity=0.151 Sum_probs=123.9
Q ss_pred cccccCCcccC-CHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEE----EEEEeeCCC-Cc
Q 003452 379 YYDASGNIKYL-DDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLL----GLVGIKDPC-RP 452 (819)
Q Consensus 379 ~~~~~g~~~~l-~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~l----G~v~i~D~l-r~ 452 (819)
.+|-|||+..- +....+...+.++.+..+|.++.....|.......-........+..+...+ +-+..+.++ ++
T Consensus 16 ~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~~~~~~~l~~~ 95 (268)
T 3r4c_A 16 LLDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIATGRAASDLHEIDAVPYDGVIALNGAECVLRDGSVIRKVAIPAQ 95 (268)
T ss_dssp EECSBTTTBCTTTCSCCHHHHHHHHHHHHTTCEEEEECSSCTTCCGGGTTSCCCEEEEGGGTEEEETTSCEEEECCCCHH
T ss_pred EEeCCCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHhHHHHhcCCCcEEEeCCcEEEEcCCeEEEEecCCHH
Confidence 36778887642 2233445667788888899988766666543211000000000000011111 011233443 45
Q ss_pred cHHHHHHHHHhcCCcEEEEcCCCH------HHHHHHHHHcCCCCCCCCCCccceecccccc---cCCHHHHHHH---hhh
Q 003452 453 GVKKAVEDCQYAGVNIKMITGDNV------FTAKAIATECGILKPGQDTSTGAVLEGEEFR---NYTHEERMEK---VDK 520 (819)
Q Consensus 453 ~v~~aI~~l~~aGI~v~mlTGD~~------~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~---~~~~~~~~~~---~~~ 520 (819)
.+.+.++.+++.++.+.+.+.+.. .......+..+................+... ....+...+. .+.
T Consensus 96 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (268)
T 3r4c_A 96 DFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCFYFDEEAEQKVMPLLSG 175 (268)
T ss_dssp HHHHHHHHHHHTTCEEEEEETTEEEESCCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCEEEECCHHHHHHHGGGCTT
T ss_pred HHHHHHHHHHHcCcEEEEEECCEEEEeCCcHHHHHHHHHcCCCCCcccchHHHhccCceEEEEEecChHHHHHHHHhCCC
Confidence 678889999999998888776642 2233444566654321000000000000000 0011221222 222
Q ss_pred hcee------ccCC--HhhHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCC
Q 003452 521 ICVM------ARSS--PFDKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588 (819)
Q Consensus 521 ~~v~------ar~s--P~~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~ 588 (819)
+.+. .... +.+|...++.+.++ .+.++++||+.||.+|++.|++|+||| ++.+.+|++||+|..+++
T Consensus 176 ~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~ 254 (268)
T 3r4c_A 176 LSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVD 254 (268)
T ss_dssp EEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTT
T ss_pred cEEEEecCCeEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCC
Confidence 2111 1122 34788888877665 246889999999999999999999999 999999999999999999
Q ss_pred hhHHHHHHHH
Q 003452 589 FASVARVLRW 598 (819)
Q Consensus 589 f~~i~~~i~~ 598 (819)
-.++.++++.
T Consensus 255 edGv~~~l~~ 264 (268)
T 3r4c_A 255 NSGLYKALKH 264 (268)
T ss_dssp TTHHHHHHHH
T ss_pred cCHHHHHHHH
Confidence 9999988864
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.61 E-value=8.8e-08 Score=92.52 Aligned_cols=111 Identities=10% Similarity=0.063 Sum_probs=86.5
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc--C
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR--S 527 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar--~ 527 (819)
..|++.++++.|++.|+++.++||.+...+..+.+++|+.. .|.. .
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------~~~~~kp 84 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------IYTGSYK 84 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE--------------------------------EEECC--
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh--------------------------------hccCCCC
Confidence 45778999999999999999999999999999999999864 1222 1
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVA 593 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~ 593 (819)
.|+--..+++.+.-..+.+.|+||+.||.++.+.|+++++++ ++.+..++.||+++.+.+-.++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~ 149 (162)
T 2p9j_A 85 KLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGAL 149 (162)
T ss_dssp CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHH
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHH
Confidence 222222233333333457899999999999999999999998 78888888999999877766655
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.57 E-value=1e-07 Score=97.30 Aligned_cols=130 Identities=22% Similarity=0.278 Sum_probs=96.2
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. ....
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~----------------~~kp 161 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTR-----LTVIAGDDSVE----------------RGKP 161 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGT-----CSEEECTTTSS----------------SCTT
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhh-----eeeEEeCCCCC----------------CCCC
Confidence 35789999999999999999999999999999999999998642 12233322211 1222
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc---ceeeCCCChHHHHh-hcCEEEeCCChhHHHHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI---GLSMGIQGTEVAKE-SSDIVILDDNFASVARVLRWGR 600 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv---GIamg~~gt~~ak~-aaDivl~dd~f~~i~~~i~~gR 600 (819)
.|+--..+.+.+.-..+.++++||+.||..|++.|++ +++||.+..+..++ .+|+++. ++..+.++++.|+
T Consensus 162 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l~~~~ 236 (237)
T 4ex6_A 162 HPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVD--SFPAAVTAVLDGH 236 (237)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEES--SHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEEC--CHHHHHHHHHccC
Confidence 3444445555555445679999999999999999999 99999444354454 7999986 8999988887654
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.55 E-value=2.9e-08 Score=98.30 Aligned_cols=119 Identities=18% Similarity=0.312 Sum_probs=89.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
+++|++.+.++.|++.|+++.++|+++...+..+ +.+|+... . .........+. -....
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~---~~~~~~~~~~~----------------~~~~~ 137 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-A---NRAIFEDGKFQ----------------GIRLR 137 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-E---EEEEEETTEEE----------------EEECC
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-e---eeEEeeCCceE----------------CCcCC
Confidence 7899999999999999999999999998888888 88886431 0 00111111000 02345
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
|..|...++.+ ..+.+.++||+.||.+|++.|++|++|+ ++.+ .||+++. ++..+.++++
T Consensus 138 ~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~--~~~el~~~l~ 197 (201)
T 4ap9_A 138 FRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVK--DLKELVDFIK 197 (201)
T ss_dssp SSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEES--SHHHHHHHHH
T ss_pred ccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEc--cHHHHHHHHH
Confidence 67798888888 4566888999999999999999999999 6655 8999986 6777776654
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.51 E-value=2.1e-07 Score=98.80 Aligned_cols=66 Identities=18% Similarity=0.208 Sum_probs=57.2
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
+|...++.+.+. .+.++++||+.||.+|++.|++|++|| ++.+..|+.||+++.+++-.++.++++
T Consensus 198 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~ 267 (282)
T 1rkq_A 198 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 267 (282)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHH
Confidence 688888777654 246899999999999999999999999 888889999999998888888888776
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.48 E-value=8.3e-07 Score=88.71 Aligned_cols=129 Identities=13% Similarity=0.048 Sum_probs=94.9
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++. +++.++|+.+...+..+.+.+|+...- ...+..+.+... ...-.-.
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f----~~~~~~~~~~~~-------------~~~~~p~ 130 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLL----CHKLEIDDSDRV-------------VGYQLRQ 130 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEE----EEEEEECTTSCE-------------EEEECCS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCccee----cceeEEcCCceE-------------EeeecCC
Confidence 6799999999999999 999999999999999999999987420 011111111000 0001256
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
|+.|...++.+....+.+.|+||+.||.+|.+.|++++++. ...+..+.+.+++. .+++..+.+++.
T Consensus 131 p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~-~~~~~~l~~~l~ 197 (206)
T 1rku_A 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPA-VHTYEDLKREFL 197 (206)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCE-ECSHHHHHHHHH
T ss_pred CchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEEC-CcHHHHHHHhhhcc-ccchHHHHHHHH
Confidence 88999999999888889999999999999999999999986 44444334445542 347888877664
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.47 E-value=1.8e-07 Score=93.50 Aligned_cols=131 Identities=18% Similarity=0.134 Sum_probs=91.2
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceeccc-ccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGE-EFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~-~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
.++|++.+.++.|++.|+++.++|+.....+..+.+.+|+...... ....+.... .+.. ......
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------------~~~~~~ 147 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIF-AVETIWNSDGSFKE-------------LDNSNG 147 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEE-EEEEEECTTSBEEE-------------EECTTS
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEE-EeeeeecCCCceec-------------cCCCCC
Confidence 3789999999999999999999999999999999999998531000 000111111 0000 012344
Q ss_pred CHhhHHHHHHHH-HhCCCEEEEEcCCCCCHHHhhh----CCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 528 SPFDKLLMVQCL-KQKGHVVAVTRDGTNDAPALKE----TDIGLSMGIQGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 528 sP~~K~~iV~~L-~~~g~~Va~~GDG~ND~~aL~~----AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
+|..|.+.+..+ .-..+.+.|+||+.||.+|++. +.+|++++ +..+..+..||+++. ++..+.+++
T Consensus 148 ~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~--~~~el~~~l 218 (219)
T 3kd3_A 148 ACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVAR--NVAELASLI 218 (219)
T ss_dssp TTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEES--SHHHHHHHH
T ss_pred CcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeC--CHHHHHHhh
Confidence 566777766555 4456789999999999999975 34555555 566788889999986 677766554
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=8.5e-07 Score=92.62 Aligned_cols=64 Identities=17% Similarity=0.196 Sum_probs=53.8
Q ss_pred hhHHHHHHHHHhC-C-----CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 530 FDKLLMVQCLKQK-G-----HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 530 ~~K~~iV~~L~~~-g-----~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
.+|...++.+.++ | +.++++||+.||.+|++.|++|++|+ ++.+ . .++++..+++-.++.++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~ 244 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVE 244 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHH
Confidence 4788888887665 3 67999999999999999999999999 7777 3 7889988888788877775
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=2.4e-07 Score=92.55 Aligned_cols=129 Identities=14% Similarity=0.085 Sum_probs=93.9
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ...++.+.. -...-.
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---~~~i~~~~~-----------------~~~kp~ 129 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFA---EADVLGRDE-----------------APPKPH 129 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSC---GGGEECTTT-----------------SCCTTS
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcC---cceEEeCCC-----------------CCCCCC
Confidence 567999999999999999999999999999999999999854210 011222111 011222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc-ceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI-GLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGR 600 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv-GIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~gR 600 (819)
|+--..+.+.+.-..+.+.++||+.||..|.+.|++ +|+|+ ++.+..++.||+++. ++..+...++..|
T Consensus 130 ~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~--~~~el~~~~~~~~ 199 (205)
T 3m9l_A 130 PGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHAR--DCAQLRDLLSAEG 199 (205)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECS--SHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeC--CHHHHHHHHHhcc
Confidence 323333344433334668999999999999999999 99999 777777888999986 8888888777543
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.38 E-value=1.3e-06 Score=93.76 Aligned_cols=66 Identities=24% Similarity=0.313 Sum_probs=57.2
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEe-CCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVIL-DDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~-dd~f~~i~~~i~ 597 (819)
+|...++.+.+. | +.++++||+.||.+|++.|++|++|+ ++.+..++.||+++. +++-.++.++++
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~ 294 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 294 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHH
Confidence 688877777654 2 46889999999999999999999999 888889999999998 888888888876
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.35 E-value=6.6e-07 Score=90.33 Aligned_cols=128 Identities=10% Similarity=0.097 Sum_probs=91.7
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.... ....
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~----------------~~kp 143 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFY-----FDAIVGSSLDG----------------KLST 143 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGG-----CSEEEEECTTS----------------SSCS
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhh-----eeeeeccCCCC----------------CCCC
Confidence 36789999999999999999999999999999999999998642 11222222110 0111
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc---ceeeCCCChHH-HHhhcCEEEeCCChhHHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI---GLSMGIQGTEV-AKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv---GIamg~~gt~~-ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
.|+--..+.+.+.-..+.++++||+.||..|.+.|++ +++||....+. .+..||+++. ++..+.+++..
T Consensus 144 ~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--s~~el~~~~~~ 216 (226)
T 3mc1_A 144 KEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVN--SVDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEES--SHHHHHHHHHT
T ss_pred CHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEEC--CHHHHHHHHHH
Confidence 2323333444444334579999999999999999999 89888433333 3688999986 78888887765
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.35 E-value=2.1e-07 Score=96.35 Aligned_cols=139 Identities=11% Similarity=0.135 Sum_probs=90.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCcccee-ccccc---------------------
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVL-EGEEF--------------------- 506 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi-~g~~~--------------------- 506 (819)
.+.+.+.++|++|+++| ++.++||+....+..+.+++ . +-...++..+. +|+..
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l-~--~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 98 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD-I--NMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRS 98 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS-C--EEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc-h--heEEECCEEEeeCCeeeecccccccchhhHHHHHHHHH
Confidence 46688999999999999 99999999999998887665 1 10001122221 11110
Q ss_pred ---------------------ccC---CHH---HHHHHh---hhhcee-----ccCCHh--hHHHHHHHHHhCCCEEEEE
Q 003452 507 ---------------------RNY---THE---ERMEKV---DKICVM-----ARSSPF--DKLLMVQCLKQKGHVVAVT 549 (819)
Q Consensus 507 ---------------------~~~---~~~---~~~~~~---~~~~v~-----ar~sP~--~K~~iV~~L~~~g~~Va~~ 549 (819)
+.. .++ ++.+.+ ..+.+. ....|. +|...++.|.+.-. |+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via~ 177 (239)
T 1u02_A 99 WVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-AIIA 177 (239)
T ss_dssp HHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-EEEE
T ss_pred HHhhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEEE
Confidence 000 001 111111 112221 112222 78888888877633 8889
Q ss_pred cCCCCCHHHhhhC--CcceeeCCCChHHHHhhcCEEEeC-CChhHHHHHHH
Q 003452 550 RDGTNDAPALKET--DIGLSMGIQGTEVAKESSDIVILD-DNFASVARVLR 597 (819)
Q Consensus 550 GDG~ND~~aL~~A--dvGIamg~~gt~~ak~aaDivl~d-d~f~~i~~~i~ 597 (819)
||+.||.+||+.| ++||||| ++ ++.||+++.+ ++-.++.++++
T Consensus 178 GD~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~ 223 (239)
T 1u02_A 178 GDDATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIE 223 (239)
T ss_dssp ESSHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHH
T ss_pred eCCCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHH
Confidence 9999999999999 9999999 66 7889999887 66677777665
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.34 E-value=1.8e-06 Score=90.76 Aligned_cols=66 Identities=32% Similarity=0.407 Sum_probs=56.6
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
+|...++.+.+. .+.++++||+.||.+|++.|++|++|| ++.+..++.||+++.+++-.++.++++
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 677777777653 256889999999999999999999999 888888999999998888888888775
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.31 E-value=1e-06 Score=89.19 Aligned_cols=127 Identities=13% Similarity=0.025 Sum_probs=91.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+.....+..+.+..|+.... ..++.+.+.. .....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp~ 149 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK-----INIVTRDDVS----------------YGKPD 149 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS-----SCEECGGGSS----------------CCTTS
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh-----heeeccccCC----------------CCCCC
Confidence 46799999999999999999999999999999999999987531 2233322211 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc---ceeeCCCChHHHHhh-cCEEEeCCChhHHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI---GLSMGIQGTEVAKES-SDIVILDDNFASVARVLRW 598 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv---GIamg~~gt~~ak~a-aDivl~dd~f~~i~~~i~~ 598 (819)
|+--..+.+.+.-..+.++++||+.||..|.+.|++ ++++|.+..+..++. +|+++. ++..+.++++.
T Consensus 150 ~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~--~~~el~~~l~~ 221 (233)
T 3s6j_A 150 PDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYE--DPLDLLNHLDE 221 (233)
T ss_dssp THHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEES--SHHHHHHTGGG
T ss_pred hHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEEC--CHHHHHHHHHH
Confidence 333333333333334668999999999999999999 777775555555554 999986 78888887765
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.31 E-value=3e-06 Score=89.51 Aligned_cols=147 Identities=12% Similarity=0.044 Sum_probs=76.1
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC-CCCCCCcccee-cc--c---c---c-ccCCHHHHHH--
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILK-PGQDTSTGAVL-EG--E---E---F-RNYTHEERME-- 516 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~-~~~~~~~~~vi-~g--~---~---~-~~~~~~~~~~-- 516 (819)
+-+.+.++|++|+++|+++.++||+....+..+.+++|+.. +-...+++.+. ++ + . + ..++.+...+
T Consensus 27 ~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 106 (275)
T 1xvi_A 27 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVL 106 (275)
T ss_dssp SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHHHH
Confidence 34668999999999999999999999999999999999854 21112233332 21 1 0 0 0111111100
Q ss_pred -----------------------------------------------------------Hhhh--hcee-----ccCCH-
Q 003452 517 -----------------------------------------------------------KVDK--ICVM-----ARSSP- 529 (819)
Q Consensus 517 -----------------------------------------------------------~~~~--~~v~-----ar~sP- 529 (819)
.+.+ +.+. ....|
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~leI~~~ 186 (275)
T 1xvi_A 107 NTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDA 186 (275)
T ss_dssp HHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHHTTEEEEECSSCEEEEET
T ss_pred HHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHHHHHhhCeEEEECCceEEEecC
Confidence 0000 0000 00111
Q ss_pred -hhHHHHHHHHHhC-C----CE--EEEEcCCCCCHHHhhhCCcceeeCCCCh---HHHHhh--cC-EEEeCCChhHHHHH
Q 003452 530 -FDKLLMVQCLKQK-G----HV--VAVTRDGTNDAPALKETDIGLSMGIQGT---EVAKES--SD-IVILDDNFASVARV 595 (819)
Q Consensus 530 -~~K~~iV~~L~~~-g----~~--Va~~GDG~ND~~aL~~AdvGIamg~~gt---~~ak~a--aD-ivl~dd~f~~i~~~ 595 (819)
.+|...++.+.+. | +. ++++||+.||.+|++.|++|++|+ ++. +..++. || ++..+++-.++.++
T Consensus 187 ~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~ 265 (275)
T 1xvi_A 187 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWREG 265 (275)
T ss_dssp TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC----------------------------
T ss_pred CCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHHH
Confidence 1455555554432 2 34 889999999999999999999999 776 555543 78 88887777888877
Q ss_pred HH
Q 003452 596 LR 597 (819)
Q Consensus 596 i~ 597 (819)
++
T Consensus 266 l~ 267 (275)
T 1xvi_A 266 LD 267 (275)
T ss_dssp --
T ss_pred HH
Confidence 75
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.28 E-value=3.7e-06 Score=87.73 Aligned_cols=210 Identities=16% Similarity=0.139 Sum_probs=115.4
Q ss_pred ccccCCcccCCHH-HHHHHHHHHHHhhhCCceeeeeecccCCcccccchhhh-----hhhcccCcEEE---EEEEeeCC-
Q 003452 380 YDASGNIKYLDDN-EKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQ-----KKLIEDNLTLL---GLVGIKDP- 449 (819)
Q Consensus 380 ~~~~g~~~~l~~~-~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~-----~~~~e~~l~~l---G~v~i~D~- 449 (819)
+|-||++..-+.. ..+...+.++.+..+|.++....-|. ..-..-..... ...+..+...+ |-+..+.+
T Consensus 7 ~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~i~~~~l 85 (261)
T 2rbk_A 7 FDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVGEEVIYKSAI 85 (261)
T ss_dssp ECSBTTTBCTTTSSCCHHHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEETTEEEEECCC
T ss_pred EeCCCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEECCEEEEecCC
Confidence 4667776543322 23345566777778898876655555 32110000000 00112222222 22233333
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCH------HHHH-HHHHHcCC-CCCCC-------CCCccceecccccccCCHHHH
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNV------FTAK-AIATECGI-LKPGQ-------DTSTGAVLEGEEFRNYTHEER 514 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~------~ta~-~iA~~~GI-~~~~~-------~~~~~~vi~g~~~~~~~~~~~ 514 (819)
.++.+.+.++.+++.|+.+.+.|+|.. .... ..-+.+++ ..... ......++.+ .+++.
T Consensus 86 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~------~~~~~ 159 (261)
T 2rbk_A 86 PQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFI------TEEEE 159 (261)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEECC------CHHHH
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEEEe------CHHHH
Confidence 457788999999999999888887753 1111 11112232 10000 0000111111 11222
Q ss_pred H---HHhhhhceec------c--CCHhhHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhh
Q 003452 515 M---EKVDKICVMA------R--SSPFDKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKES 579 (819)
Q Consensus 515 ~---~~~~~~~v~a------r--~sP~~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~a 579 (819)
. +.++.+.+.. . .....|...++.+.++ .+.++++||+.||.+|++.|++|++|+ ++.+..++.
T Consensus 160 ~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~ 238 (261)
T 2rbk_A 160 KEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAA 238 (261)
T ss_dssp HHHGGGSTTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHH
T ss_pred HHHHHhcCCeEEEEecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhh
Confidence 2 2222222211 0 1123677777766543 356889999999999999999999999 888888999
Q ss_pred cCEEEeCCChhHHHHHHH
Q 003452 580 SDIVILDDNFASVARVLR 597 (819)
Q Consensus 580 aDivl~dd~f~~i~~~i~ 597 (819)
||+++.+.+-.++.++++
T Consensus 239 a~~v~~~~~~dGv~~~l~ 256 (261)
T 2rbk_A 239 ADYVTAPIDEDGISKAMK 256 (261)
T ss_dssp SSEECCCGGGTHHHHHHH
T ss_pred CCEEeccCchhhHHHHHH
Confidence 999998666666887765
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.27 E-value=8.8e-07 Score=93.21 Aligned_cols=67 Identities=24% Similarity=0.291 Sum_probs=57.6
Q ss_pred hhHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 530 FDKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 530 ~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
..|...++.+.++ | +.++++||+.||.+|++.|++|++|+ ++.+..|+.||+++.+++-.++.++++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~ 260 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 260 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHH
Confidence 3788888777654 3 46899999999999999999999999 888889999999998877788888776
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.27 E-value=2.5e-06 Score=86.78 Aligned_cols=109 Identities=17% Similarity=0.145 Sum_probs=77.0
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhcee-ccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVM-ARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~-ar~ 527 (819)
+++|++.+.++.|++.|+++.++||.....+..+++.+|+..-.. .........+.. .+. ...
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~g-------------~~~~~~~ 155 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIA---TDPEYRDGRYTG-------------RIEGTPS 155 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEE---CEEEEETTEEEE-------------EEESSCS
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEE---cceEEECCEEee-------------eecCCCC
Confidence 579999999999999999999999999999999999999862100 000000000000 011 122
Q ss_pred CHhhHHHHHHHHHh-CC------CEEEEEcCCCCCHHHhhhCCcceeeCCCChH
Q 003452 528 SPFDKLLMVQCLKQ-KG------HVVAVTRDGTNDAPALKETDIGLSMGIQGTE 574 (819)
Q Consensus 528 sP~~K~~iV~~L~~-~g------~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~ 574 (819)
.+..|...++.+.+ .| +.+.++||+.||.+|++.|++++++. ...+
T Consensus 156 ~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~-~~~~ 208 (232)
T 3fvv_A 156 FREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN-PSPG 208 (232)
T ss_dssp STHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES-CCHH
T ss_pred cchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC-cCHH
Confidence 34677776655443 35 67999999999999999999999997 4433
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.25 E-value=5.9e-06 Score=87.66 Aligned_cols=66 Identities=26% Similarity=0.325 Sum_probs=55.6
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
+|...++.+.+. .+.++++||+.||.+|++.|++|++|+ ++.+..++.||+++.+++-.++.++++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~ 285 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 285 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHH
Confidence 466666666543 246899999999999999999999999 888989999999998888888888876
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.23 E-value=8.7e-07 Score=92.18 Aligned_cols=55 Identities=22% Similarity=0.129 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHhC-----CCEEEEEcCCCCCHHHhhhCCcceeeCCCCh-HHHHhhcCEEEe
Q 003452 530 FDKLLMVQCLKQK-----GHVVAVTRDGTNDAPALKETDIGLSMGIQGT-EVAKESSDIVIL 585 (819)
Q Consensus 530 ~~K~~iV~~L~~~-----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt-~~ak~aaDivl~ 585 (819)
.+|...++.+.+. .+.|+++||+.||.+||+.|++|++|| ++. +..++.||+++.
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~ 238 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDV 238 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceEEec
Confidence 3588877777654 357899999999999999999999999 777 667777887654
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.21 E-value=2.4e-06 Score=88.87 Aligned_cols=127 Identities=15% Similarity=0.173 Sum_probs=88.9
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|++....+..+.+.+|+.... ...++.+.... .....
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~----------------~~kp~ 162 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK----PDFLVTPDDVP----------------AGRPY 162 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC----CSCCBCGGGSS----------------CCTTS
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccC----hHheecCCccC----------------CCCCC
Confidence 46799999999999999999999999999888888888765321 01122222110 11223
Q ss_pred HhhHHHHHHHHHhCC-CEEEEEcCCCCCHHHhhhCC---cceeeCCCC------------------------hHHHHhh-
Q 003452 529 PFDKLLMVQCLKQKG-HVVAVTRDGTNDAPALKETD---IGLSMGIQG------------------------TEVAKES- 579 (819)
Q Consensus 529 P~~K~~iV~~L~~~g-~~Va~~GDG~ND~~aL~~Ad---vGIamg~~g------------------------t~~ak~a- 579 (819)
|+--..+.+.+.-.. +.++++||+.||..|++.|+ +++++| ++ .+..++.
T Consensus 163 ~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (267)
T 1swv_A 163 PWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG-SSELGLTEEEVENMDSVELREKIEVVRNRFVENG 241 (267)
T ss_dssp SHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT-CTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC-CCccCccHHHHhhchhhhhhhhhhhHHHHHHhcC
Confidence 444445555555444 67999999999999999999 788888 44 2334444
Q ss_pred cCEEEeCCChhHHHHHHHH
Q 003452 580 SDIVILDDNFASVARVLRW 598 (819)
Q Consensus 580 aDivl~dd~f~~i~~~i~~ 598 (819)
||+++. ++..+..++..
T Consensus 242 ad~v~~--~~~el~~~l~~ 258 (267)
T 1swv_A 242 AHFTIE--TMQELESVMEH 258 (267)
T ss_dssp CSEEES--SGGGHHHHHHH
T ss_pred Cceecc--CHHHHHHHHHH
Confidence 999985 78888877754
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.19 E-value=1.4e-06 Score=88.22 Aligned_cols=128 Identities=19% Similarity=0.215 Sum_probs=87.8
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccce--------ecccccccCCHHHHHHHhh
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAV--------LEGEEFRNYTHEERMEKVD 519 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~v--------i~g~~~~~~~~~~~~~~~~ 519 (819)
-++.|++.++++.|+++|+++.++|+.+...+..+.+.+|+..... ...+ +.|.+.
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~---f~~~~~~~~~~~~~~~~~------------- 148 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNV---FANRLKFYFNGEYAGFDE------------- 148 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGE---EEECEEECTTSCEEEECT-------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccE---EeeeEEEcCCCcEecCCC-------------
Confidence 3689999999999999999999999999999999999999863100 0000 111110
Q ss_pred hhceeccCCHhhHHHHHHHHHhC-C-CEEEEEcCCCCCHHHhhhCCcceeeCCCC-hHHHHhhcCEEEeCCChhHHHHHH
Q 003452 520 KICVMARSSPFDKLLMVQCLKQK-G-HVVAVTRDGTNDAPALKETDIGLSMGIQG-TEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 520 ~~~v~ar~sP~~K~~iV~~L~~~-g-~~Va~~GDG~ND~~aL~~AdvGIamg~~g-t~~ak~aaDivl~dd~f~~i~~~i 596 (819)
....+.+..|..+++.+.++ | +.+.|+||+.||..+.+.|+++|+++... .+.....+|+++. ++..+.+++
T Consensus 149 ---~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~--~~~el~~~l 223 (225)
T 1nnl_A 149 ---TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVELLGEL 223 (225)
T ss_dssp ---TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGGCC--
T ss_pred ---CCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeec--CHHHHHHHH
Confidence 00111223566666655443 4 56899999999999999999988887332 2344567899886 676665544
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.19 E-value=2e-06 Score=86.30 Aligned_cols=122 Identities=15% Similarity=0.189 Sum_probs=86.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+.....+..+.+..|+... ...++.+.... .....
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~----------------~~kp~ 152 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS-----FDALASAEKLP----------------YSKPH 152 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-----CSEEEECTTSS----------------CCTTS
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhh-----CcEEEeccccC----------------CCCCC
Confidence 5679999999999999999999999999988888888887542 11222221110 11122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceee----CCCChHHHHhhcCEEEeCCChhHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSM----GIQGTEVAKESSDIVILDDNFASVAR 594 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIam----g~~gt~~ak~aaDivl~dd~f~~i~~ 594 (819)
|+--..+.+.+.-..+.++++||+.||.+|++.|+++++| + ++.+..+..||+++. ++..+..
T Consensus 153 ~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~--~~~el~~ 219 (226)
T 1te2_A 153 PQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLS--SLTELTA 219 (226)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECS--CGGGCCH
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEEC--CHHHHhH
Confidence 3334445555544456789999999999999999999999 5 444456788999886 5555443
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=2.2e-06 Score=88.80 Aligned_cols=66 Identities=14% Similarity=0.101 Sum_probs=56.0
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhh-------cCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKES-------SDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~a-------aDivl~dd~f~~i~~~i~ 597 (819)
+|...++.+.+. | +.++++||+.||.+|++.|++|++|| ++.+..|+. ||++..+++-.++.++++
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 688888777654 2 46889999999999999999999999 888888885 889998888888888776
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.15 E-value=1.6e-06 Score=86.99 Aligned_cols=115 Identities=10% Similarity=0.085 Sum_probs=79.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|++ ..+..+.+.+|+... ...++.+.+.. .....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~-----f~~~~~~~~~~----------------~~Kp~ 147 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGY-----FDAIADPAEVA----------------ASKPA 147 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGG-----CSEECCTTTSS----------------SCTTS
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHH-----cceEeccccCC----------------CCCCC
Confidence 46799999999999999999999998 445667777887532 11222222110 11122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCC
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN 588 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~ 588 (819)
|+--..+.+.+.-..+.+.++||+.||.+|++.|+++++|. ++.+..+ .||+++.+.+
T Consensus 148 ~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~ 205 (221)
T 2wf7_A 148 PDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTS 205 (221)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGG
T ss_pred hHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHH
Confidence 32333344444333456889999999999999999999999 7777677 8999986443
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.14 E-value=2e-06 Score=86.21 Aligned_cols=124 Identities=16% Similarity=0.145 Sum_probs=81.4
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCH
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSP 529 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 529 (819)
+.|++.+.++.|++.|+++.++|+..........+.+|+... ...++.+.+.. .....|
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------------~~k~~~ 148 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDW-----FDIIIGGEDVT----------------HHKPDP 148 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTC-----CSEEECGGGCS----------------SCTTST
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhh-----eeeeeehhhcC----------------CCCCCh
Confidence 468999999999999999999999999999998888887642 11222222110 011122
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceee----CCCChHHHHhh-cCEEEeCCChhHHHHHHH
Q 003452 530 FDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSM----GIQGTEVAKES-SDIVILDDNFASVARVLR 597 (819)
Q Consensus 530 ~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIam----g~~gt~~ak~a-aDivl~dd~f~~i~~~i~ 597 (819)
+--..+.+.+.-..+.+.++||+.||.+|++.|+++++| + +..+..+.. ||+++. ++..+.+.++
T Consensus 149 ~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~--~~~el~~~l~ 218 (225)
T 3d6j_A 149 EGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIIS--TLGQLISVPE 218 (225)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEES--SGGGGC----
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEEC--CHHHHHHhhh
Confidence 222333343333345688999999999999999999887 4 333444444 899886 5666665554
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.12 E-value=2.5e-06 Score=86.48 Aligned_cols=127 Identities=10% Similarity=0.073 Sum_probs=93.6
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp 156 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLF-----DHVLSVDAVR----------------LYKT 156 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTC-----SEEEEGGGTT----------------CCTT
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhc-----CEEEEecccC----------------CCCc
Confidence 356799999999999999999999999999999999999986531 2222222211 1122
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceee----CCCChHHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSM----GIQGTEVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIam----g~~gt~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
.|+--..+.+.+.-..+.+.++||+.||..|.+.|+++.+| + ++.+..+..+|+++. ++..+.+++..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~--~~~el~~~l~~ 228 (233)
T 3umb_A 157 APAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGH--DMRDLLQFVQA 228 (233)
T ss_dssp SHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEES--SHHHHHHHHHC
T ss_pred CHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEEC--CHHHHHHHHHH
Confidence 33333444555544446789999999999999999999999 5 445555677999986 88888888765
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.11 E-value=1.7e-06 Score=89.22 Aligned_cols=124 Identities=17% Similarity=0.236 Sum_probs=86.1
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. ...-.
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~-----f~~~~~~~~~~----------------~~Kp~ 172 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHL-----FSEMLGGQSLP----------------EIKPH 172 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG-----CSEEECTTTSS----------------SCTTS
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchhe-----EEEEEecccCC----------------CCCcC
Confidence 5679999999999999999999999999999999999998642 12233332211 11122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCccee-eC--CC-ChHHHHhhcCEEEeCCChhHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS-MG--IQ-GTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIa-mg--~~-gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
|+--..+.+.+.-..+.++++||+.||.+|.+.|+++.. +. .. +.+..+..+|+++. ++..+.++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~--~~~el~~~ 241 (243)
T 2hsz_A 173 PAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILKI 241 (243)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGGG
T ss_pred HHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEEC--CHHHHHHH
Confidence 334444555554445678999999999999999998844 32 11 23445678999885 56655443
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.10 E-value=2.6e-06 Score=90.29 Aligned_cols=131 Identities=16% Similarity=0.153 Sum_probs=87.5
Q ss_pred CCCccHHHHHHHHHhc-CCcEEEEcCC---------------------CHHHHHHHHHHcCCCCCCCCCCccceeccccc
Q 003452 449 PCRPGVKKAVEDCQYA-GVNIKMITGD---------------------NVFTAKAIATECGILKPGQDTSTGAVLEGEEF 506 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~a-GI~v~mlTGD---------------------~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~ 506 (819)
..++++.+.++.+++. |+++.+.|.. ....+..+.+..|+... +......
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~--------~~~~~~~ 193 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVN--------INRCNPL 193 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEE--------EEECCGG
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEE--------EEEcccc
Confidence 4678999999999998 9999988876 33444444555554321 0000000
Q ss_pred ccCCHHHHHHHhhhhceeccCCH--hhHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhc
Q 003452 507 RNYTHEERMEKVDKICVMARSSP--FDKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESS 580 (819)
Q Consensus 507 ~~~~~~~~~~~~~~~~v~ar~sP--~~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aa 580 (819)
..- +.-..+....| ..|...++.+.++ | +.++++||+.||.+|++.|++|++|+ ++.+..++.|
T Consensus 194 ~~~---------~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a 263 (289)
T 3gyg_A 194 AGD---------PEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLH 263 (289)
T ss_dssp GTC---------CTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHC
T ss_pred ccC---------CCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhC
Confidence 000 00001111122 3566666666543 3 46899999999999999999999999 8889999999
Q ss_pred CEEEeCCChhHHHHHHH
Q 003452 581 DIVILDDNFASVARVLR 597 (819)
Q Consensus 581 Divl~dd~f~~i~~~i~ 597 (819)
|+++.+++-.++.++++
T Consensus 264 ~~v~~~~~~~gv~~~~~ 280 (289)
T 3gyg_A 264 NLITDSEYSKGITNTLK 280 (289)
T ss_dssp CCBCSSCHHHHHHHHHH
T ss_pred CEEcCCCCcCHHHHHHH
Confidence 99998887778887776
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.09 E-value=2.8e-06 Score=86.85 Aligned_cols=126 Identities=15% Similarity=0.088 Sum_probs=88.1
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
.++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... ....
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp 167 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYF-----KYIAGSNLDG----------------TRVN 167 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC-----SEEEEECTTS----------------CCCC
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhE-----EEEEeccccC----------------CCCC
Confidence 357899999999999999999999999999999999999986421 1222222110 0111
Q ss_pred CHhhHHHHHHHHHhC-CCEEEEEcCCCCCHHHhhhCCc---ceeeCCCChH-HHHhhcCEEEeCCChhHHHHHH
Q 003452 528 SPFDKLLMVQCLKQK-GHVVAVTRDGTNDAPALKETDI---GLSMGIQGTE-VAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 528 sP~~K~~iV~~L~~~-g~~Va~~GDG~ND~~aL~~Adv---GIamg~~gt~-~ak~aaDivl~dd~f~~i~~~i 596 (819)
.|+--..+.+.+.-. .+.++++||+.||..|.+.|++ ++++|....+ ..+..+|+++. ++..+.+++
T Consensus 168 ~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~--~~~el~~~l 239 (240)
T 3sd7_A 168 KNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVE--NVESIKDIL 239 (240)
T ss_dssp HHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEES--SSTTHHHHH
T ss_pred CHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEEC--CHHHHHHHh
Confidence 222223344444444 5578999999999999999999 8887733333 23578999987 677776654
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.09 E-value=5.4e-06 Score=84.04 Aligned_cols=114 Identities=14% Similarity=0.132 Sum_probs=74.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+... +..+.+.+|+...- ..++.+.+.. ...-.
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f-----~~i~~~~~~~----------------~~Kp~ 148 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF-----HAIVDPTTLA----------------KGKPD 148 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC-----SEECCC-------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc-----CEEeeHhhCC----------------CCCCC
Confidence 3789999999999999999999999754 77788889986531 1222222110 11112
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCC
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDD 587 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd 587 (819)
|+--..+.+.+.-..+.+.|+||+.||..|.+.|+++++|. ++.+..+ .||+++.+.
T Consensus 149 ~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s~ 205 (233)
T 3nas_A 149 PDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQT 205 (233)
T ss_dssp CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSSG
T ss_pred hHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCCh
Confidence 22224445555444567899999999999999999999999 5555555 899998743
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.08 E-value=1.2e-05 Score=81.33 Aligned_cols=125 Identities=18% Similarity=0.151 Sum_probs=91.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f-----~~~~~~~~~~----------------~~kp~ 157 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLF-----DSITTSEEAG----------------FFKPH 157 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEEHHHHT----------------BCTTS
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHc-----ceeEeccccC----------------CCCcC
Confidence 5679999999999999 999999999999999999999986421 1222221110 12223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhhhCC---cceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALKETD---IGLSMGIQGTEVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~Ad---vGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
|+--..+.+.+.-..+.+.++||+. ||..|.+.|+ +++++| ++.+..++.+|+++. ++..+.++++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~--~~~el~~~l~~ 228 (234)
T 3u26_A 158 PRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVS--DLREVIKIVDE 228 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEES--STHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeC--CHHHHHHHHHH
Confidence 3333444555544446799999997 9999999999 688888 666767779999986 78888777653
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.07 E-value=3.4e-06 Score=85.20 Aligned_cols=127 Identities=13% Similarity=0.097 Sum_probs=90.2
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.+.+.. ...-
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~----------------~~kp 153 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSF-----DHLISVDEVR----------------LFKP 153 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGC-----SEEEEGGGTT----------------CCTT
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhc-----ceeEehhhcc----------------cCCC
Confidence 367899999999999999999999999999999999999986421 1222222211 1122
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCC---CChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGI---QGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~---~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
.|+--..+.+.+.-..+.+.++||+.||..|.+.|+++++|-. +..+..+..+|+++. ++..+.++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 224 (230)
T 3um9_A 154 HQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS--DVGVLASRFS 224 (230)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES--SHHHHHHTCC
T ss_pred ChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC--CHHHHHHHHH
Confidence 3333344445554444678999999999999999999999931 344445667899887 6777766543
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.05 E-value=2.6e-06 Score=84.49 Aligned_cols=122 Identities=16% Similarity=0.151 Sum_probs=87.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. .....
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~----------------~~kp~ 147 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGF-----FDIVLSGEEFK----------------ESKPN 147 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-----CSEEEEGGGCS----------------SCTTS
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhh-----eeeEeeccccc----------------CCCCC
Confidence 5789999999999999999999999999999999999998642 12233322211 11223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCC-hHHHHhhcCEEEeCCChhHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQG-TEVAKESSDIVILDDNFASVA 593 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~g-t~~ak~aaDivl~dd~f~~i~ 593 (819)
|+--..+.+.+.-..+.++++||+.||..|.+.|+++..+..++ ....+..+|+++. ++..+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~--~~~el~ 211 (214)
T 3e58_A 148 PEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLD--SLTDVL 211 (214)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEES--SGGGGG
T ss_pred hHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHH--HHHHHH
Confidence 33444455555444567899999999999999999988887433 3344477898886 555544
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.04 E-value=8.1e-06 Score=82.40 Aligned_cols=126 Identities=11% Similarity=0.030 Sum_probs=84.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCC---HHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceec
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDN---VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA 525 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~---~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a 525 (819)
.+.|++.+.++.|++.|+++.++|+.. ...+....+.+|+... ...++.+.+.. ..
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~----------------~~ 157 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEF-----IDKTFFADEVL----------------SY 157 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGG-----CSEEEEHHHHT----------------CC
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHH-----hhhheeccccC----------------CC
Confidence 357999999999999999999999999 8888888888887642 11222221110 11
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhhhCCcceeeCC--CChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 526 RSSPFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALKETDIGLSMGI--QGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 526 r~sP~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~AdvGIamg~--~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
...|+--..+.+.+.-..+.++++||+. ||..|.+.|+++++|-. +..+..+..+|+++. ++..+.++++
T Consensus 158 kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 230 (235)
T 2om6_A 158 KPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIP--SIANLKDVIE 230 (235)
T ss_dssp TTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEES--SGGGHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHh--hHHHHHHHHH
Confidence 1223322333333332346789999999 99999999999999931 333333445787775 7777776654
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.03 E-value=3.5e-06 Score=82.99 Aligned_cols=119 Identities=14% Similarity=0.163 Sum_probs=82.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
.+.|++.+.++.|++.|+++.++|++...... ..+.+|+... ...++.+.+.. .....
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~-----f~~~~~~~~~~----------------~~Kp~ 142 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESY-----FTEILTSQSGF----------------VRKPS 142 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGG-----EEEEECGGGCC----------------CCTTS
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhh-----eeeEEecCcCC----------------CCCCC
Confidence 35799999999999999999999999988888 8888887532 11222221110 11122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc-eeeCCCChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG-LSMGIQGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG-Iamg~~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
|+--..+.+.+.-..+.++++||+.||.+|++.|+++ ++|+ ++. . .+|+++. ++..+.+++
T Consensus 143 ~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~~--~~~el~~~l 204 (207)
T 2go7_A 143 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-EST-Y---EGNHRIQ--ALADISRIF 204 (207)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCS-C---TTEEECS--STTHHHHHT
T ss_pred cHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEeC--CHHHHHHHH
Confidence 3333445555554456689999999999999999997 8888 665 2 6888875 666666544
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.03 E-value=5.4e-06 Score=84.07 Aligned_cols=126 Identities=13% Similarity=0.110 Sum_probs=88.2
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+. -...-
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~-----f~~i~~~~~~----------------~~~Kp 140 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGY-----FDLIVGGDTF----------------GEKKP 140 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG-----CSEEECTTSS----------------CTTCC
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHH-----heEEEecCcC----------------CCCCC
Confidence 35789999999999999999999999999999999999998542 1122222221 01223
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc-eeeCC-CChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG-LSMGI-QGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG-Iamg~-~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
.|+-...+.+.+.-..+.++++||+.||.+|.+.|++. +++.. .+.... ..+|+++. ++..+.+++.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~--~~~el~~~l~ 209 (222)
T 2nyv_A 141 SPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLS--RPSDLVKLMD 209 (222)
T ss_dssp TTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEES--STTHHHHHHH
T ss_pred ChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEEC--CHHHHHHHHH
Confidence 34444555555554456789999999999999999987 55441 222212 56888875 7888877664
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.02 E-value=8.9e-06 Score=83.43 Aligned_cols=138 Identities=12% Similarity=0.112 Sum_probs=90.8
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHH--Hhhhhceec
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERME--KVDKICVMA 525 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~--~~~~~~v~a 525 (819)
-+++|++.+.++.|+++|+++.++|+.+...+..+.+ |+... ..++.+.....- ..+.. .-+.-..+-
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~------~~v~~~~~~~~~--~~~~~~~~kp~p~~~~ 145 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK------DRIYCNHASFDN--DYIHIDWPHSCKGTCS 145 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG------GGEEEEEEECSS--SBCEEECTTCCCTTCC
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC------CeEEeeeeEEcC--CceEEecCCCCccccc
Confidence 4789999999999999999999999999998888887 76432 123322221100 00000 000000011
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhh--cCEEEeCCChhHHHHHHHH
Q 003452 526 RSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKES--SDIVILDDNFASVARVLRW 598 (819)
Q Consensus 526 r~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~a--aDivl~dd~f~~i~~~i~~ 598 (819)
+....+|..+++.+....+.+.|+||+.||.++.+.|++.++.. ...+..++. +|+++. ++..+.+++..
T Consensus 146 ~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~--~~~el~~~l~~ 217 (236)
T 2fea_A 146 NQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQ--DFYEIRKEIEN 217 (236)
T ss_dssp SCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCS--SHHHHHHHHHT
T ss_pred cccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecC--CHHHHHHHHHH
Confidence 11245788888888777788999999999999999999988753 222233333 666664 78888777654
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.7e-06 Score=95.88 Aligned_cols=118 Identities=19% Similarity=0.148 Sum_probs=74.8
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
..++|++++.|+.|+++|++|+++||.....++.+|+++|+..... ...|+ |..+..-.+..+.-.+.. ...-+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip---~~~Vi-g~~l~~~~dG~~tg~~~~--~~p~~ 293 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMK---EEKVL-GLRLMKDDEGKILPKFDK--DFPIS 293 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCC---GGGEE-EECEEECTTCCEEEEECT--TSCCC
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCC---cceEE-EeEEEEecCCceeeeecC--cccee
Confidence 3478999999999999999999999999999999999998743210 01111 221110000000000000 00113
Q ss_pred CHhhHHHHHHHHHhC--C-CEEEEEcCCCCCHHHhhh-CCcceeeCCC
Q 003452 528 SPFDKLLMVQCLKQK--G-HVVAVTRDGTNDAPALKE-TDIGLSMGIQ 571 (819)
Q Consensus 528 sP~~K~~iV~~L~~~--g-~~Va~~GDG~ND~~aL~~-AdvGIamg~~ 571 (819)
..+.|...++.+.+. | ..+.++|||.||.+||++ +|.++++..+
T Consensus 294 ~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~liin 341 (385)
T 4gxt_A 294 IREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIH 341 (385)
T ss_dssp STHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEEEC
T ss_pred CCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEEEc
Confidence 456899998877433 1 346677999999999986 6666665443
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.01 E-value=1e-05 Score=81.89 Aligned_cols=123 Identities=15% Similarity=0.095 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHhc-CCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVEDCQYA-GVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~a-GI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
++.|++.+.++.|++. |+++.++|+.....+..+.+.+|+...- ..++.+.+.. .
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~-----------------~-- 148 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-----PFGAFADDAL-----------------D-- 148 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-----SCEECTTTCS-----------------S--
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhc-----CcceecCCCc-----------------C--
Confidence 3679999999999999 9999999999999999999999986531 1122222210 0
Q ss_pred CHhhHHH----HHHHHH--hCCCEEEEEcCCCCCHHHhhhCC---cceeeCCCChHHHHh-hcCEEEeCCChhHHHHHHH
Q 003452 528 SPFDKLL----MVQCLK--QKGHVVAVTRDGTNDAPALKETD---IGLSMGIQGTEVAKE-SSDIVILDDNFASVARVLR 597 (819)
Q Consensus 528 sP~~K~~----iV~~L~--~~g~~Va~~GDG~ND~~aL~~Ad---vGIamg~~gt~~ak~-aaDivl~dd~f~~i~~~i~ 597 (819)
.|.-+.. +.+.+. -..+.+.++||+.||..|.+.|+ +++++|....+..+. .+|+++. ++..+.++++
T Consensus 149 ~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~--~~~el~~~l~ 226 (234)
T 2hcf_A 149 RNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 226 (234)
T ss_dssp GGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred ccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeC--CHHhHHHHHH
Confidence 1111222 233332 12356899999999999999999 666666322333322 3898886 5555655554
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.01 E-value=9.2e-06 Score=82.29 Aligned_cols=122 Identities=10% Similarity=0.102 Sum_probs=84.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.+.. ...-.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f-----~~i~~~~~~~----------------~~Kp~ 161 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYF-----DSIIGSGDTG----------------TIKPS 161 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGC-----SEEEEETSSS----------------CCTTS
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhe-----eeEEcccccC----------------CCCCC
Confidence 46899999999999999999999999999999999999986421 1222222110 11223
Q ss_pred HhhHHHHHHHHHhCCC-EEEEEcCCCCCHHHhhhCCc-ceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGH-VVAVTRDGTNDAPALKETDI-GLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~-~Va~~GDG~ND~~aL~~Adv-GIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
|+--..+.+.+.-..+ .+.++||+.||..|.+.|++ ++.++ ++.+ ..+|.++. ++..+.+++.
T Consensus 162 ~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~--~~~el~~~l~ 226 (231)
T 3kzx_A 162 PEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFK--NFYDIRNFIC 226 (231)
T ss_dssp SHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEES--SHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeC--CHHHHHHHHH
Confidence 3333445555544444 78999999999999999997 77776 5543 35677775 7888777664
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.00 E-value=1.4e-05 Score=83.10 Aligned_cols=128 Identities=13% Similarity=0.025 Sum_probs=89.9
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...++.+.+.. ...-.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~----------------~~kp~ 170 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT----PASTVFATDVV----------------RGRPF 170 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC----CSEEECGGGSS----------------SCTTS
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC----CceEecHHhcC----------------CCCCC
Confidence 56789999999999999999999999999999999988876421 11222222211 11223
Q ss_pred HhhHHHHHHHHHhCC-CEEEEEcCCCCCHHHhhhCC---cceeeCCC-----------------------ChHHHH-hhc
Q 003452 529 PFDKLLMVQCLKQKG-HVVAVTRDGTNDAPALKETD---IGLSMGIQ-----------------------GTEVAK-ESS 580 (819)
Q Consensus 529 P~~K~~iV~~L~~~g-~~Va~~GDG~ND~~aL~~Ad---vGIamg~~-----------------------gt~~ak-~aa 580 (819)
|+--..+.+.+.-.. +.+.|+||+.||..|.+.|+ |++++|.+ ..+..+ ..+
T Consensus 171 ~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 250 (277)
T 3iru_A 171 PDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGA 250 (277)
T ss_dssp SHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCC
Confidence 333344555555455 77999999999999999999 57777732 123333 349
Q ss_pred CEEEeCCChhHHHHHHHH
Q 003452 581 DIVILDDNFASVARVLRW 598 (819)
Q Consensus 581 Divl~dd~f~~i~~~i~~ 598 (819)
|+++. ++..+..++..
T Consensus 251 d~v~~--~~~el~~~l~~ 266 (277)
T 3iru_A 251 HYVID--SVADLETVITD 266 (277)
T ss_dssp SEEES--SGGGTHHHHHH
T ss_pred CEEec--CHHHHHHHHHH
Confidence 99986 78888887764
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=6e-06 Score=86.85 Aligned_cols=129 Identities=10% Similarity=0.003 Sum_probs=87.7
Q ss_pred CCCccHHHHHHHHHhcCC--cEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc
Q 003452 449 PCRPGVKKAVEDCQYAGV--NIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI--~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
++.|++.+.++.|++.|+ ++.++|+.....+..+.+.+|+...- ..++.+...... ...+.
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f-----d~v~~~~~~~~~------------~~~~K 204 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF-----DGLTYCDYSRTD------------TLVCK 204 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSC-----SEEECCCCSSCS------------SCCCT
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccccc-----ceEEEeccCCCc------------ccCCC
Confidence 578999999999999999 99999999999999999999987531 222222211100 01122
Q ss_pred CCHhhHHHHHHHHHhCC-CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHH-----HhhcCEEEeCCChhHHHHHH
Q 003452 527 SSPFDKLLMVQCLKQKG-HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVA-----KESSDIVILDDNFASVARVL 596 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g-~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~a-----k~aaDivl~dd~f~~i~~~i 596 (819)
-.|+--..+.+.+.-.. +.+.++||+.||..|.+.|++|.+|+....... ...+|+++. ++..+.+++
T Consensus 205 p~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~--sl~el~~~l 278 (282)
T 3nuq_A 205 PHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVIS--DILELPHVV 278 (282)
T ss_dssp TSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEES--SGGGGGGTS
T ss_pred cCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeC--CHHHHHHHh
Confidence 23333334444444444 679999999999999999999999984332211 337888886 676666544
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.4e-05 Score=78.05 Aligned_cols=125 Identities=14% Similarity=0.061 Sum_probs=82.0
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCH---------------HHHHHHHHHcC--CCCCCCCCCcccee-cccccccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNV---------------FTAKAIATECG--ILKPGQDTSTGAVL-EGEEFRNYT 510 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~---------------~ta~~iA~~~G--I~~~~~~~~~~~vi-~g~~~~~~~ 510 (819)
++.|++.++++.|+++|+++.++|+... ..+..+.+.+| +..- ..... .+.+.
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-----~~~~~~~~~~~---- 97 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAI-----FMCPHGPDDGC---- 97 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEE-----EEECCCTTSCC----
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEE-----EEcCCCCCCCC----
Confidence 5789999999999999999999999885 56667777788 3210 00000 00110
Q ss_pred HHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc---ceeeCCCChHHHH----hhcCEE
Q 003452 511 HEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI---GLSMGIQGTEVAK----ESSDIV 583 (819)
Q Consensus 511 ~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv---GIamg~~gt~~ak----~aaDiv 583 (819)
-...-.|+-=..+.+.+.-..+.+.|+||+.||..+.+.|++ ++++| .+..... ..+|++
T Consensus 98 ------------~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~~d~v 164 (179)
T 3l8h_A 98 ------------ACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPEGTRV 164 (179)
T ss_dssp ------------SSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCTTEEE
T ss_pred ------------CCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCCCcEE
Confidence 011222332233444444445679999999999999999995 77777 4444443 457888
Q ss_pred EeCCChhHHHHHHH
Q 003452 584 ILDDNFASVARVLR 597 (819)
Q Consensus 584 l~dd~f~~i~~~i~ 597 (819)
+. ++..+.+++.
T Consensus 165 ~~--~l~el~~~l~ 176 (179)
T 3l8h_A 165 CE--DLAAVAEQLL 176 (179)
T ss_dssp ES--SHHHHHHHHH
T ss_pred ec--CHHHHHHHHH
Confidence 87 7877777664
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.92 E-value=1.9e-05 Score=80.43 Aligned_cols=127 Identities=11% Similarity=0.124 Sum_probs=83.3
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+...-. ...++.+.+.. ....
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~---~~~~~~~~~~~----------------~~kp 166 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQ---ANLMVTAFDVK----------------YGKP 166 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCC---GGGEECGGGCS----------------SCTT
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcC---CCeEEecccCC----------------CCCC
Confidence 46789999999999999999999999988877777777 8764210 02233333211 1222
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc-eeeCCCChH----HHHhhcCEEEeCCChhHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG-LSMGIQGTE----VAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG-Iamg~~gt~----~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
.|+--..+.+.+.-..+.+.++||+.||..|.+.|+++ +.+. .|.. ..+..+|+++. ++..+.++++
T Consensus 167 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 238 (247)
T 3dv9_A 167 NPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLFH--SMPDFNKNWE 238 (247)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEES--SHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 33334445555544456689999999999999999964 3333 3322 22347999986 7887777665
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.91 E-value=7.8e-06 Score=82.88 Aligned_cols=126 Identities=10% Similarity=0.104 Sum_probs=87.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. ...-.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~----------------~~Kp~ 153 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDG-----FDHLLSVDPVQ----------------VYKPD 153 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-----CSEEEESGGGT----------------CCTTS
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhh-----hheEEEecccC----------------CCCCC
Confidence 4779999999999999999999999999999999999998542 11222222211 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCC---ChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQ---GTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~---gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
|+--..+.+.+.-..+.+.++||+.||..|.+.|+++.++-.. ..+..+..+|+++. ++..+..++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 223 (232)
T 1zrn_A 154 NRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVELFE 223 (232)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTTC-
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEEC--CHHHHHHHHH
Confidence 4444445555544445688999999999999999999988322 22333456888875 6777665543
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=1.4e-05 Score=81.62 Aligned_cols=124 Identities=10% Similarity=0.106 Sum_probs=85.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. ...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~----------------~~Kp~ 163 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRV-----LDSCLSADDLK----------------IYKPD 163 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-----CSEEEEGGGTT----------------CCTTS
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHH-----cCEEEEccccC----------------CCCCC
Confidence 5789999999999999999999999999999999999998642 11222222211 12223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc---ceeeCCCChHHHHhhc-CEEEeCCChhHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI---GLSMGIQGTEVAKESS-DIVILDDNFASVARVL 596 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv---GIamg~~gt~~ak~aa-Divl~dd~f~~i~~~i 596 (819)
|+--..+.+.+.-..+.+.++||+.||..|.+.|++ ++..| .+.+..+..+ |+++. ++..+..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 232 (240)
T 2no4_A 164 PRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQVN--SLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEES--SGGGHHHHH
T ss_pred HHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceeeC--CHHHHHHHH
Confidence 433444455554444568899999999999999995 44445 2223234456 88875 677777655
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.89 E-value=7.6e-05 Score=76.18 Aligned_cols=125 Identities=18% Similarity=0.117 Sum_probs=85.1
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.+.. ...-.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~----------------~~Kp~ 152 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDF-----FEHVIISDFEG----------------VKKPH 152 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGG-----CSEEEEGGGGT----------------CCTTC
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhh-----ccEEEEeCCCC----------------CCCCC
Confidence 5789999999999999999999999999999999999997642 12222222111 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhhhCCcceee---CCCChHHHHh---hcCEEEeCCChhHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALKETDIGLSM---GIQGTEVAKE---SSDIVILDDNFASVARVLR 597 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~AdvGIam---g~~gt~~ak~---aaDivl~dd~f~~i~~~i~ 597 (819)
|+--..+.+.+.-..+.+.++||+. ||..|.+.|+++... | .+...... .+|+++. ++..+..++.
T Consensus 153 ~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 225 (241)
T 2hoq_A 153 PKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEID--NLESLLEVLA 225 (241)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEES--STTHHHHHHH
T ss_pred HHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEEC--CHHHHHHHHH
Confidence 3322334444443445689999998 999999999987554 3 33333332 6898876 6777766653
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.88 E-value=1.5e-05 Score=82.50 Aligned_cols=128 Identities=12% Similarity=0.046 Sum_probs=87.7
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccc-eecccccccCCHHHHHHHhhhhceecc
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGA-VLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~-vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
-++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+... ... ++.+.+.. ....
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~-----f~~~i~~~~~~~---------------~~~K 168 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTEL-----AGEHIYDPSWVG---------------GRGK 168 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHH-----HCSCEECGGGGT---------------TCCT
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhh-----ccceEEeHhhcC---------------cCCC
Confidence 35678999999999999999999999999999999999987531 111 22222211 0112
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc-eeeCCCC-------h-HHHHhhcCEEEeCCChhHHHHHHH
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG-LSMGIQG-------T-EVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG-Iamg~~g-------t-~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
-.|+--..+.+.+.-..+.++++||+.||..|.+.|+++ +.+. .| . +..+..+|+++. ++..+.++++
T Consensus 169 p~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~--~l~el~~~l~ 245 (259)
T 4eek_A 169 PHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLT--SHAELRAALA 245 (259)
T ss_dssp TSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEEC--SHHHHHHHHH
T ss_pred CChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhC--CHHHHHHHHH
Confidence 223322334444433346799999999999999999998 4443 23 2 233455899986 8888888876
Q ss_pred H
Q 003452 598 W 598 (819)
Q Consensus 598 ~ 598 (819)
.
T Consensus 246 ~ 246 (259)
T 4eek_A 246 E 246 (259)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.88 E-value=1.9e-05 Score=80.83 Aligned_cols=127 Identities=10% Similarity=0.141 Sum_probs=84.8
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
.++.|++.+.++.|++.|+++.++|+.....+....+. |+..... ...++.+.+.. ....
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~---~d~i~~~~~~~----------------~~kp 167 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFH---KELMVTAFDVK----------------YGKP 167 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCC---GGGEECTTTCS----------------SCTT
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcC---cceEEeHHhCC----------------CCCC
Confidence 36789999999999999999999999987777777666 7764210 02233333221 1222
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc-eeeCCCChH----HHHhhcCEEEeCCChhHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG-LSMGIQGTE----VAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG-Iamg~~gt~----~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
.|+--..+.+.+.-..+.+.++||+.||..|.+.|+++ +.+. ++.. ..+..+|+++. ++..+.++++
T Consensus 168 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~--s~~el~~~l~ 239 (243)
T 3qxg_A 168 NPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFP--SMQTLCDSWD 239 (243)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEES--CHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEEC--CHHHHHHHHH
Confidence 33333334444433346689999999999999999984 4444 4332 23346999986 7888877665
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=6.5e-05 Score=75.80 Aligned_cols=136 Identities=15% Similarity=0.134 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCC---------------HHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHH
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDN---------------VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEE 513 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~---------------~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~ 513 (819)
++.|++.++++.|+++|+++.++|+.. ...+..+.+++|+.-. ..+..+........+
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~------~~~~~~~~~~~~~~~- 122 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD------GIYYCPHHPQGSVEE- 122 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS------EEEEECCBTTCSSGG-
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceE------EEEECCcCCCCcccc-
Confidence 678999999999999999999999999 4677788888888511 111111100000000
Q ss_pred HHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc----ceeeCCCChHHHHhhcCEEEeCCCh
Q 003452 514 RMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI----GLSMGIQGTEVAKESSDIVILDDNF 589 (819)
Q Consensus 514 ~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv----GIamg~~gt~~ak~aaDivl~dd~f 589 (819)
.........-.|+--..+.+.+.-..+.+.|+||+.||..+.+.|++ ++..|....+.....+|+++. ++
T Consensus 123 ----~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~--~l 196 (211)
T 2gmw_A 123 ----FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SL 196 (211)
T ss_dssp ----GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CG
T ss_pred ----cCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC--CH
Confidence 00000112233433344445554344568899999999999999995 444442223334456899885 78
Q ss_pred hHHHHHHH
Q 003452 590 ASVARVLR 597 (819)
Q Consensus 590 ~~i~~~i~ 597 (819)
..+.+++.
T Consensus 197 ~el~~~l~ 204 (211)
T 2gmw_A 197 ADLPQAIK 204 (211)
T ss_dssp GGHHHHHH
T ss_pred HHHHHHHH
Confidence 88777654
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.77 E-value=4.3e-05 Score=78.21 Aligned_cols=123 Identities=11% Similarity=0.132 Sum_probs=82.6
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCH
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSP 529 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 529 (819)
+.|++.+.++.|++.|+++.++|+.....+..+.+.+|+. . ...++.+.+.. ...-.|
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~-----f~~~~~~~~~~----------------~~Kp~p 168 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S-----FDFALGEKSGI----------------RRKPAP 168 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T-----CSEEEEECTTS----------------CCTTSS
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c-----eeEEEecCCCC----------------CCCCCH
Confidence 5689999999999999999999999998888888999975 2 12233332210 111222
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc---eeeCCCChHHH-HhhcCEEEeCCChhHHHHHH
Q 003452 530 FDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG---LSMGIQGTEVA-KESSDIVILDDNFASVARVL 596 (819)
Q Consensus 530 ~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG---Iamg~~gt~~a-k~aaDivl~dd~f~~i~~~i 596 (819)
+-=..+.+.+.-..+.+.|+||+.||..|.+.|++. +++|....+.. +..+|+++. ++..+...+
T Consensus 169 ~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~--~~~el~~~l 237 (240)
T 2hi0_A 169 DMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVD--TAEKLEEAI 237 (240)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEEC--SHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEEC--CHHHHHHHh
Confidence 222233344433345689999999999999999994 55662222333 346898875 677766554
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.76 E-value=4.8e-05 Score=76.91 Aligned_cols=123 Identities=9% Similarity=0.034 Sum_probs=84.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|+ .|+++.++|+.....+....+.+|+... ...++.+.+.. .....
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~----------------~~kp~ 164 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRY-----FKKIILSEDLG----------------VLKPR 164 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGG-----CSEEEEGGGTT----------------CCTTS
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhh-----ceeEEEeccCC----------------CCCCC
Confidence 56899999999999 9999999999999999999999998642 11222222211 11122
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhhhCCcceeeCCCChH-HHHhhcCEEEeCCChhHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALKETDIGLSMGIQGTE-VAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~AdvGIamg~~gt~-~ak~aaDivl~dd~f~~i~~~ 595 (819)
|+--..+.+.+.-..+.++++||+. ||..|.+.|+++++|...+.. ..+..+|+++. ++..+..+
T Consensus 165 ~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~--sl~e~~~~ 231 (240)
T 3qnm_A 165 PEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIH--SLKELMNL 231 (240)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEES--STHHHHHH
T ss_pred HHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEEC--CHHHHHHH
Confidence 2222333333332346789999995 999999999999999844432 45567899987 56665544
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.72 E-value=4.1e-05 Score=75.91 Aligned_cols=122 Identities=9% Similarity=0.114 Sum_probs=84.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+ ++.|++. +++.++|+.+...+..+.+.+|+... ...++.+.+.. ...-.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~----------------~~Kp~ 130 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRY-----FKGIFSAESVK----------------EYKPS 130 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGG-----CSEEEEGGGGT----------------CCTTC
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHh-----CcEEEehhhcC----------------CCCCC
Confidence 56799999 9999999 99999999999999999999998642 12233332211 11223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCC---CChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGI---QGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~---~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
|+--..+.+.+. .+.+.|+||+.||..|.+.|+++..+-. +..+..+..+|.++. ++..+..++.
T Consensus 131 ~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~ 198 (201)
T 2w43_A 131 PKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN--DFKELYEWIL 198 (201)
T ss_dssp HHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC--CHHHHHHHHH
Confidence 444445555555 4568899999999999999999977721 222233456888876 6777766553
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.72 E-value=8.4e-06 Score=83.84 Aligned_cols=122 Identities=12% Similarity=0.144 Sum_probs=77.4
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH-cCCCCCCCCCCccceeccc--ccccCCHHHHHHHhhhhcee
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE-CGILKPGQDTSTGAVLEGE--EFRNYTHEERMEKVDKICVM 524 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~-~GI~~~~~~~~~~~vi~g~--~~~~~~~~~~~~~~~~~~v~ 524 (819)
-++.|++.+.++.|++.|+++.++|+.....+...-.+ .|+... ...++.+. +.. .
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~-----f~~~~~~~~~~~~----------------~ 169 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSL-----FSHIVLGDDPEVQ----------------H 169 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTT-----SSCEECTTCTTCC----------------S
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhh-----eeeEEecchhhcc----------------C
Confidence 35789999999999999999999999987665543222 343321 11122222 110 1
Q ss_pred ccCCHhhHHHHHHHHHhCC--CEEEEEcCCCCCHHHhhhCC---cceeeCCCChHHHHhhcCEEEeCCChhHHH
Q 003452 525 ARSSPFDKLLMVQCLKQKG--HVVAVTRDGTNDAPALKETD---IGLSMGIQGTEVAKESSDIVILDDNFASVA 593 (819)
Q Consensus 525 ar~sP~~K~~iV~~L~~~g--~~Va~~GDG~ND~~aL~~Ad---vGIamg~~gt~~ak~aaDivl~dd~f~~i~ 593 (819)
..-.|+--..+.+.+.-.. +.+.++||+.||..|.+.|+ +++++| ++.+..+..||+++. ++..+.
T Consensus 170 ~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~--sl~el~ 240 (250)
T 3l5k_A 170 GKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLN--SLQDFQ 240 (250)
T ss_dssp CTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECS--CGGGCC
T ss_pred CCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeec--CHHHhh
Confidence 1112222122222222122 67999999999999999999 677778 556667889999986 555543
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.70 E-value=3.9e-05 Score=80.53 Aligned_cols=114 Identities=15% Similarity=0.063 Sum_probs=78.7
Q ss_pred CCccHHHHHHHHHhc-CCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 450 CRPGVKKAVEDCQYA-GVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 450 lr~~v~~aI~~l~~a-GI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
+.|++.+.++.|++. |+++.++|+.....+....+..|+.. ...++.+.+... ....
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~------f~~i~~~~~~~~----------------~kp~ 172 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR------PEYFITANDVKQ----------------GKPH 172 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC------CSSEECGGGCSS----------------CTTS
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc------cCEEEEcccCCC----------------CCCC
Confidence 579999999999999 99999999999999999999998853 123333333211 1122
Q ss_pred HhhHHHHHHHHHh-------CCCEEEEEcCCCCCHHHhhhCCcceee---CCCChHHHHhhcCEEEe
Q 003452 529 PFDKLLMVQCLKQ-------KGHVVAVTRDGTNDAPALKETDIGLSM---GIQGTEVAKESSDIVIL 585 (819)
Q Consensus 529 P~~K~~iV~~L~~-------~g~~Va~~GDG~ND~~aL~~AdvGIam---g~~gt~~ak~aaDivl~ 585 (819)
|+--..+.+.+.- ..+.++++||+.||..|++.|+++++| |.+..+..+..||+++.
T Consensus 173 ~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~ 239 (275)
T 2qlt_A 173 PEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVK 239 (275)
T ss_dssp SHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEES
T ss_pred hHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC
Confidence 3333344444443 445689999999999999999966655 52323333345898875
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.68 E-value=7.6e-05 Score=75.38 Aligned_cols=126 Identities=9% Similarity=0.050 Sum_probs=85.4
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-++.|++.+.++.|++. +++.++|+.....+....+.+|+... ...++.+.+.. ...-
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~----------------~~kp 159 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPF-----FKDIFVSEDTG----------------FQKP 159 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGG-----CSEEEEGGGTT----------------SCTT
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhh-----hheEEEecccC----------------CCCC
Confidence 36789999999999999 99999999999999999999988642 11222222211 1112
Q ss_pred CHhhHHHHHHHHH-hCCCEEEEEcCCC-CCHHHhhhCCcceeeCCCC--hHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 528 SPFDKLLMVQCLK-QKGHVVAVTRDGT-NDAPALKETDIGLSMGIQG--TEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 528 sP~~K~~iV~~L~-~~g~~Va~~GDG~-ND~~aL~~AdvGIamg~~g--t~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
.|+--..+.+.+. -..+.+.++||+. ||..|.+.|+++..+-..+ .+..+..+|+++. ++..+.++++
T Consensus 160 ~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~--~~~el~~~l~ 231 (238)
T 3ed5_A 160 MKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR--KLEELYHILN 231 (238)
T ss_dssp CHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEES--SGGGHHHHHT
T ss_pred ChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEEC--CHHHHHHHHH
Confidence 2222222333332 2235699999998 9999999999954332233 4456678999986 7888887765
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.67 E-value=6.9e-06 Score=81.94 Aligned_cols=121 Identities=7% Similarity=0.126 Sum_probs=81.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+... ...++.+.+.. ...-.
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~-----f~~~~~~~~~~----------------~~KP~ 140 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMR-----MAVTISADDTP----------------KRKPD 140 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGG-----EEEEECGGGSS----------------CCTTS
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhh-----ccEEEecCcCC----------------CCCCC
Confidence 4689999999999999 99999999999989988888887532 11222222110 01112
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCC--C-ChHHHHhhcCEEEeCCChhHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGI--Q-GTEVAKESSDIVILDDNFASVAR 594 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~--~-gt~~ak~aaDivl~dd~f~~i~~ 594 (819)
|+--..+.+.+.-..+.+.++||+.||..|.+.|+++++|.. . ..+..++ +|+++. ++..+.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~--~~~el~~ 206 (209)
T 2hdo_A 141 PLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQ--KPLDILE 206 (209)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEES--SGGGGGG
T ss_pred cHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeC--CHHHHHH
Confidence 333334444444334678999999999999999999999742 1 2333444 899885 5555543
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.66 E-value=5.8e-05 Score=73.66 Aligned_cols=108 Identities=15% Similarity=0.057 Sum_probs=71.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
.+.|++.+.++.|++.|+++.++|+... .+..+.+.+|+... ...++.+.+.. .....
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~-----f~~~~~~~~~~----------------~~kp~ 139 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAY-----FTEVVTSSSGF----------------KRKPN 139 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGG-----EEEEECGGGCC----------------CCTTS
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhh-----eeeeeeccccC----------------CCCCC
Confidence 3689999999999999999999999874 56677788887532 11222222110 11112
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcC
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSD 581 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaD 581 (819)
|+--..+.+.+.-. .+.++||+.||..|.+.|++++++. +.....++..+
T Consensus 140 ~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l~ 189 (190)
T 2fi1_A 140 PESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 189 (190)
T ss_dssp CHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred HHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhccC
Confidence 33223333333322 6889999999999999999998887 55555555544
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.66 E-value=5.3e-05 Score=76.01 Aligned_cols=118 Identities=10% Similarity=0.048 Sum_probs=80.2
Q ss_pred CCCccHHHHHHHHHhcC-CcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVEDCQYAG-VNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aG-I~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
++.|++.+.++.|++.| +++.++|+........+.+.+|+.... .. +++..
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f-----~~-----------------------~~~~~ 156 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF-----DH-----------------------IEVMS 156 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC-----SE-----------------------EEEES
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh-----he-----------------------eeecC
Confidence 56899999999999999 999999999999989999999985421 11 12222
Q ss_pred --CHhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhhhCCcceeeCC------CChHHHHhhc-CEEEeCCChhHHHHHH
Q 003452 528 --SPFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALKETDIGLSMGI------QGTEVAKESS-DIVILDDNFASVARVL 596 (819)
Q Consensus 528 --sP~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~AdvGIamg~------~gt~~ak~aa-Divl~dd~f~~i~~~i 596 (819)
.|+--..+.+.+.-..+.++++||+. ||..|.+.|+++.++-. .+....+..+ |+++. ++..+.+++
T Consensus 157 kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~--~l~el~~~l 233 (234)
T 3ddh_A 157 DKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVK--RLDDLLSLL 233 (234)
T ss_dssp CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECS--SGGGHHHHC
T ss_pred CCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecc--cHHHHHHhc
Confidence 22222233333333346689999996 99999999999888721 2222223344 77776 677776543
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.66 E-value=5.6e-05 Score=78.00 Aligned_cols=124 Identities=15% Similarity=0.175 Sum_probs=86.9
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|+ |+++.++|+.+...+..+.+.+|+.... ..++.+.+.. ...-.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f-----~~~~~~~~~~----------------~~Kp~ 149 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF-----DAVISVDAKR----------------VFKPH 149 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEEGGGGT----------------CCTTS
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc-----cEEEEccccC----------------CCCCC
Confidence 67899999999999 9999999999999999999999986421 1222222211 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCC-----------------------C---hHHHHhhcCE
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQ-----------------------G---TEVAKESSDI 582 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~-----------------------g---t~~ak~aaDi 582 (819)
|+--..+.+.+.-..+.+.++||+.||..|.+.|+++.++... + .+..+..+|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~ 229 (253)
T 1qq5_A 150 PDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDF 229 (253)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSE
T ss_pred HHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCe
Confidence 4344444455443345688999999999999999999988733 1 1223456888
Q ss_pred EEeCCChhHHHHHHH
Q 003452 583 VILDDNFASVARVLR 597 (819)
Q Consensus 583 vl~dd~f~~i~~~i~ 597 (819)
++. ++..+..++.
T Consensus 230 ~~~--~~~el~~~l~ 242 (253)
T 1qq5_A 230 VVP--ALGDLPRLVR 242 (253)
T ss_dssp EES--SGGGHHHHHH
T ss_pred eeC--CHHHHHHHHH
Confidence 885 7888877664
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.64 E-value=7.4e-05 Score=75.09 Aligned_cols=123 Identities=11% Similarity=0.114 Sum_probs=81.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceec--c
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA--R 526 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a--r 526 (819)
++.|++.+.++.++. ++.++|+........+.+++|+..... ..++.+.... .. .
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~----~~~~~~~~~~----------------~~~~k 143 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFA----PHIYSAKDLG----------------ADRVK 143 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTT----TCEEEHHHHC----------------TTCCT
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhcc----ceEEeccccc----------------cCCCC
Confidence 567888888888764 899999999999999999998864210 1122221110 01 1
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc-eeeCCCChH-------HHHhh-cCEEEeCCChhHHHHHHH
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG-LSMGIQGTE-------VAKES-SDIVILDDNFASVARVLR 597 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG-Iamg~~gt~-------~ak~a-aDivl~dd~f~~i~~~i~ 597 (819)
..|+--..+.+.+.-..+.++++||+.||.+|++.|+++ ++++ ++.+ ..++. ||+++. ++..+.++++
T Consensus 144 pk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~--~~~el~~~l~ 220 (229)
T 2fdr_A 144 PKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS--RMQDLPAVIA 220 (229)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHHH
T ss_pred cCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeec--CHHHHHHHHH
Confidence 223333344444443446688999999999999999998 6676 5443 35666 999986 6777766553
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.54 E-value=9.6e-05 Score=75.32 Aligned_cols=124 Identities=18% Similarity=0.166 Sum_probs=85.2
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.-+ .++.+.... ...-.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~-------~~~~~~~~~----------------~~kp~ 171 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWD-------VIIGSDINR----------------KYKPD 171 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCS-------CCCCHHHHT----------------CCTTS
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCee-------EEEEcCcCC----------------CCCCC
Confidence 5679999999999997 99999999999999999999998521 111111110 11112
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCC----Ch----HH-HHhhcCEEEeCCChhHHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQ----GT----EV-AKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~----gt----~~-ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
|+-=..+.+.+.-..+.+.++||+.||..|.+.|+++++|... |. +. .+..+|+++. ++..+..++..
T Consensus 172 ~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~--~~~el~~~l~~ 248 (254)
T 3umg_A 172 PQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISAT--DITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEES--SHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEEC--CHHHHHHHhcC
Confidence 2222222222222236689999999999999999999999841 11 11 3567899987 88888887754
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00027 Score=69.81 Aligned_cols=137 Identities=12% Similarity=0.038 Sum_probs=91.9
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCH---HHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhcee
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNV---FTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVM 524 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~---~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 524 (819)
-++.|++.++++.|+++|+++.++|+... ..+..+.+.+|+... ...++...+.... .-.
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~-----fd~i~~~~~~~~~------------~~~ 95 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDY-----FDFIYASNSELQP------------GKM 95 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGG-----EEEEEECCTTSST------------TCC
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhh-----eEEEEEccccccc------------cCC
Confidence 36889999999999999999999998775 888999999998642 1122222211000 001
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCC-CCCHHHhhhCCcceeeCCCChH-----HH-HhhcCEEEeCCChhHHHHHHH
Q 003452 525 ARSSPFDKLLMVQCLKQKGHVVAVTRDG-TNDAPALKETDIGLSMGIQGTE-----VA-KESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 525 ar~sP~~K~~iV~~L~~~g~~Va~~GDG-~ND~~aL~~AdvGIamg~~gt~-----~a-k~aaDivl~dd~f~~i~~~i~ 597 (819)
..-.|+--..+.+.+.-..+.+.|+||+ .+|..+-++|++....-..+.. .. ...+|.++.+.++..+.++++
T Consensus 96 ~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~ 175 (189)
T 3ib6_A 96 EKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALL 175 (189)
T ss_dssp CTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHH
T ss_pred CCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHH
Confidence 2223444444555554445679999999 7999999999986443212221 11 126789988778999999988
Q ss_pred HHHH
Q 003452 598 WGRC 601 (819)
Q Consensus 598 ~gR~ 601 (819)
..+.
T Consensus 176 l~~~ 179 (189)
T 3ib6_A 176 LLKK 179 (189)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7554
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.52 E-value=8.4e-05 Score=76.09 Aligned_cols=123 Identities=14% Similarity=0.118 Sum_probs=86.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++. +++.++|+.....+..+.+.+|+.- ..++.+... -.....
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f-------~~~~~~~~~----------------~~~kp~ 175 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW-------DMLLCADLF----------------GHYKPD 175 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC-------SEECCHHHH----------------TCCTTS
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc-------ceEEeeccc----------------ccCCCC
Confidence 4568999999999985 9999999999999999999999852 112211111 012223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCC----CCh---HH--HHhhcCEEEeCCChhHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGI----QGT---EV--AKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~----~gt---~~--ak~aaDivl~dd~f~~i~~~i~ 597 (819)
|+--..+.+.+.-..+.++++||+.||..|.+.|+++++|.. .|. +. .+..+|+++. ++..+.+++.
T Consensus 176 ~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~--~l~el~~~l~ 251 (254)
T 3umc_A 176 PQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIAS--DLLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEES--SHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEEC--CHHHHHHHhc
Confidence 333334444444344679999999999999999999999984 122 11 2667899987 7888877764
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00011 Score=74.03 Aligned_cols=123 Identities=10% Similarity=0.125 Sum_probs=84.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++ |+++.++|+..........+.++-. ...++.+.+.. ...-.
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~-------fd~i~~~~~~~----------------~~KP~ 154 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE-------FDHIITAQDVG----------------SYKPN 154 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC-------CSEEEEHHHHT----------------SCTTS
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc-------cCEEEEccccC----------------CCCCC
Confidence 678999999999999 8999999999988877776654321 12222222211 22344
Q ss_pred HhhHHHHHHHHHhC---CCEEEEEcCCC-CCHHHhhhCCcceeeCCCC----------hHHHHhhcCEEEeCCChhHHHH
Q 003452 529 PFDKLLMVQCLKQK---GHVVAVTRDGT-NDAPALKETDIGLSMGIQG----------TEVAKESSDIVILDDNFASVAR 594 (819)
Q Consensus 529 P~~K~~iV~~L~~~---g~~Va~~GDG~-ND~~aL~~AdvGIamg~~g----------t~~ak~aaDivl~dd~f~~i~~ 594 (819)
|+-....++.+++. .+.+.++||+. ||..|.+.|+++.+|...+ .+..+..+|+++. ++..+.+
T Consensus 155 ~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~--~~~el~~ 232 (240)
T 3smv_A 155 PNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFN--SMGEMAE 232 (240)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEES--SHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeC--CHHHHHH
Confidence 55444554434433 46689999996 9999999999999995222 1334578999986 7887777
Q ss_pred HHH
Q 003452 595 VLR 597 (819)
Q Consensus 595 ~i~ 597 (819)
++.
T Consensus 233 ~l~ 235 (240)
T 3smv_A 233 AHK 235 (240)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.48 E-value=6.6e-05 Score=78.10 Aligned_cols=126 Identities=13% Similarity=0.125 Sum_probs=88.1
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.++++.|++.|+++.++|+.... ...+.+.+|+...- ..++.+.+. -...-.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f-----~~~~~~~~~----------------~~~Kp~ 163 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF-----DFVLTSEAA----------------GWPKPD 163 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC-----SCEEEHHHH----------------SSCTTS
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh-----hEEEeeccc----------------CCCCCC
Confidence 36799999999999999999999987664 57788889985421 122222211 122334
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhhhCCcceeeCCCChHH-----HHhhcCEEEeCCChhHHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALKETDIGLSMGIQGTEV-----AKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~AdvGIamg~~gt~~-----ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
|+--..+.+.+.-..+.+.|+||+. ||..|.+.|+++.++...+... ....+|+++. ++..+.+++..
T Consensus 164 ~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~--~l~el~~~l~~ 237 (263)
T 3k1z_A 164 PRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILP--SLAHLLPALDC 237 (263)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEES--SGGGHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeC--CHHHHHHHHHH
Confidence 4444555555554456799999997 9999999999999998444211 2236888886 78888877764
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00014 Score=71.71 Aligned_cols=93 Identities=10% Similarity=-0.054 Sum_probs=65.5
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCC-HHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDN-VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~-~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
++.|++.++++.|++.|+++.++||.. ...+..+.+.+|+.... ..+ .+....
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f-----~~~---------------------~~~~~~ 121 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYF-----VHR---------------------EIYPGS 121 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTE-----EEE---------------------EESSSC
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhc-----cee---------------------EEEeCc
Confidence 688999999999999999999999998 79999999999986521 000 011111
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCccee
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS 567 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIa 567 (819)
.|+.-..+.+.+.-..+.+.++||+.||..+.++|++...
T Consensus 122 k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 122 KITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred hHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 1221122223332223568899999999999999987543
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00014 Score=72.71 Aligned_cols=117 Identities=15% Similarity=0.105 Sum_probs=79.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++ |+++.++|+.+...+..+.+.+|+.... ..++.+. ..
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f-----~~i~~~~----------------------~~ 135 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF-----DGIYGSS----------------------PE 135 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC-----SEEEEEC----------------------SS
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe-----eeeecCC----------------------CC
Confidence 467999999999999 9999999999988888888999986421 1111111 01
Q ss_pred HhhHHHHHHH-HHhC---CCEEEEEcCCCCCHHHhhhCCc---ceeeCCCChHHHH-hhcCEEEeCCChhHHHHH
Q 003452 529 PFDKLLMVQC-LKQK---GHVVAVTRDGTNDAPALKETDI---GLSMGIQGTEVAK-ESSDIVILDDNFASVARV 595 (819)
Q Consensus 529 P~~K~~iV~~-L~~~---g~~Va~~GDG~ND~~aL~~Adv---GIamg~~gt~~ak-~aaDivl~dd~f~~i~~~ 595 (819)
+.-|..+.+. +++. .+.+.++||+.||+.|.++|++ ++++|....+..+ ..+|+++. ++..+..+
T Consensus 136 ~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~--~~~el~~~ 208 (210)
T 2ah5_A 136 APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLAY 208 (210)
T ss_dssp CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHHH
T ss_pred CCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHHH
Confidence 1122233332 3333 3568999999999999999999 7888733233333 36899886 56665543
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00048 Score=70.64 Aligned_cols=118 Identities=12% Similarity=0.102 Sum_probs=82.1
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc--
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR-- 526 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar-- 526 (819)
++.|++.+.++.|+ .|+++.++|+.....+....+.+|+..... . +++.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~-----~-----------------------i~~~~k 162 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFP-----R-----------------------IEVVSE 162 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCC-----C-----------------------EEEESC
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCc-----e-----------------------eeeeCC
Confidence 56899999999999 999999999999998888888888754210 1 1221
Q ss_pred CCHhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhhhCCcceeeCCCChH--------HHHhhcCE-EEeCCChhHHHHHH
Q 003452 527 SSPFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALKETDIGLSMGIQGTE--------VAKESSDI-VILDDNFASVARVL 596 (819)
Q Consensus 527 ~sP~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~AdvGIamg~~gt~--------~ak~aaDi-vl~dd~f~~i~~~i 596 (819)
-.|+--..+.+.+.-..+.++++||+. ||..|.+.|++++++-..|.. .....+|+ ++. ++..+..++
T Consensus 163 p~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~l 240 (251)
T 2pke_A 163 KDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVP--DPSGWPAAV 240 (251)
T ss_dssp CSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECS--SGGGHHHHH
T ss_pred CCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeC--CHHHHHHHH
Confidence 223333444444443446789999999 999999999999876433321 11345787 664 788877766
Q ss_pred H
Q 003452 597 R 597 (819)
Q Consensus 597 ~ 597 (819)
.
T Consensus 241 ~ 241 (251)
T 2pke_A 241 R 241 (251)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00021 Score=70.48 Aligned_cols=102 Identities=10% Similarity=0.027 Sum_probs=73.2
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.| ++.++|+.+...+..+.+.+|+...- ..++.+.+. -.....
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f-----~~~~~~~~~----------------~~~Kp~ 143 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL-----LAFFTSSAL----------------GVMKPN 143 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC-----SCEEEHHHH----------------SCCTTC
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc-----ceEEeeccc----------------CCCCCC
Confidence 47799999999999999 99999999999999999999976421 122222111 112333
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCC
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQG 572 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~g 572 (819)
|+--..+.+.+.-..+.+.++||+.||..|.+.|++...+-..+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 144 PAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred HHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 44444455555444467899999999999999999998876333
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00078 Score=67.19 Aligned_cols=126 Identities=17% Similarity=0.222 Sum_probs=83.0
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++.|+++.++|+.+...+....+.+|+... ...++.+.+.. ...-.
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~-----fd~~~~~~~~~----------------~~KP~ 142 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKY-----FDVMVFGDQVK----------------NGKPD 142 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGG-----CSEEECGGGSS----------------SCTTS
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCcc-----ccccccccccC----------------CCccc
Confidence 4679999999999999999999999999999999999998753 12233322221 12223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc----eeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG----LSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG----Iamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
|+-=....+.+.-.-+.+.|+||..+|..+=++|++. +.-|.+..+..+++.+..+. +...+.+.++
T Consensus 143 p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~--~~~eli~~l~ 213 (216)
T 3kbb_A 143 PEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV--KPEEILNVLK 213 (216)
T ss_dssp THHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE--CGGGHHHHHH
T ss_pred HHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC--CHHHHHHHHH
Confidence 3333344444544446689999999999999999974 33343334444454443433 3444555443
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.20 E-value=9.8e-05 Score=73.45 Aligned_cols=100 Identities=7% Similarity=-0.043 Sum_probs=69.1
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH------cCCCCCCCCCCccceecccccccCCHHHHHHHhhhhc
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE------CGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKIC 522 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~------~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 522 (819)
++.|++.+.++.|++ |+++.++|+.....+..+.+. .|+... ...++.+.+.
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~-----f~~~~~~~~~---------------- 146 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSF-----FDKVYASCQM---------------- 146 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGG-----SSEEEEHHHH----------------
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHH-----cCeEEeeccc----------------
Confidence 467999999999999 999999999988888777766 565431 1112211111
Q ss_pred eeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCC
Q 003452 523 VMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGI 570 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~ 570 (819)
-...-.|+--..+.+.+.-..+.+.++||+.||..|.+.|+++..+..
T Consensus 147 ~~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~ 194 (211)
T 2i6x_A 147 GKYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPD 194 (211)
T ss_dssp TCCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCC
T ss_pred CCCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEEC
Confidence 012223433444455554444678999999999999999999998883
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0012 Score=68.52 Aligned_cols=41 Identities=12% Similarity=0.046 Sum_probs=35.5
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcC---CCHHHHHHHHHHcCCCC
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITG---DNVFTAKAIATECGILK 490 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTG---D~~~ta~~iA~~~GI~~ 490 (819)
+-|+++++|++++++|++++++|| ..........+++|+..
T Consensus 25 ~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~ 68 (268)
T 3qgm_A 25 PIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV 68 (268)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred eCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence 457899999999999999999999 67777777788888864
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00058 Score=70.65 Aligned_cols=37 Identities=11% Similarity=0.163 Sum_probs=32.0
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGI 488 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI 488 (819)
.+-+++.++|++|+++|+++.++||++... +.+.++.
T Consensus 21 ~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~---~~~~l~~ 57 (246)
T 3f9r_A 21 CQTDEMRALIKRARGAGFCVGTVGGSDFAK---QVEQLGR 57 (246)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHCT
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHhhh
Confidence 567889999999999999999999999884 5666774
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00034 Score=64.30 Aligned_cols=97 Identities=10% Similarity=-0.011 Sum_probs=66.0
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+...- ..++.+.+. -..+-.
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~----------------~~~Kp~ 76 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVV-----DKVLLSGEL----------------GVEKPE 76 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSS-----SEEEEHHHH----------------SCCTTS
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhc-----cEEEEeccC----------------CCCCCC
Confidence 46688999999999999999999999988888888888876421 122221111 012223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcce
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGL 566 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGI 566 (819)
|+--..+.+.+.-..+.+.|+||+.+|..+.+++++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~ 114 (137)
T 2pr7_A 77 EAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVG 114 (137)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEE
Confidence 33333333433333346889999999999999998743
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.002 Score=66.87 Aligned_cols=125 Identities=12% Similarity=0.126 Sum_probs=84.2
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.++++.|++ |+++.++|+.+...+..+.+.+|+... ...++.+.+.. ..+-.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~-----f~~i~~~~~~~----------------~~KP~ 178 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSY-----FDAIVIGGEQK----------------EEKPA 178 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGG-----CSEEEEGGGSS----------------SCTTC
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhh-----hheEEecCCCC----------------CCCCC
Confidence 577999999999998 699999999999999999999998642 12223322211 12223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCC-CCCHHHhhhCCc--ceeeCCCChH--HHHhhcCEEEeCCChhHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDG-TNDAPALKETDI--GLSMGIQGTE--VAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG-~ND~~aL~~Adv--GIamg~~gt~--~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
|+--..+.+.+.-..+.+.|+||. .||..+-+.|++ .+.++..+.. .....+|+++. ++..+.+++.
T Consensus 179 p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 250 (260)
T 2gfh_A 179 PSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQ 250 (260)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHH
T ss_pred HHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEEC--CHHHHHHHHH
Confidence 433344444444344678999995 999999999999 5777622211 12345788876 6777766553
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00028 Score=71.27 Aligned_cols=108 Identities=16% Similarity=0.062 Sum_probs=65.0
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCCCccceecccccccCCHH
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNV---------------FTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHE 512 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~---------------~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~ 512 (819)
.++.|++.++++.|+++|+++.++|+... ..+..+.+++|+.-.. ......+.. ..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----~~~~~~~~~-g~~~-- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDM----VLACAYHEA-GVGP-- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSE----EEEECCCTT-CCST--
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceee----EEEeecCCC-Ccee--
Confidence 46789999999999999999999999887 6778888888874210 000000000 0000
Q ss_pred HHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcce
Q 003452 513 ERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGL 566 (819)
Q Consensus 513 ~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGI 566 (819)
+ .... .....-.|.-=..+.+.+.-..+.++|+||+.||..+.+.|++..
T Consensus 128 ~---~~~~-~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 L---AIPD-HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp T---CCSS-CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred e---cccC-CccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 0 0000 001111222222233333323456899999999999999999764
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0012 Score=66.33 Aligned_cols=119 Identities=16% Similarity=0.153 Sum_probs=76.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|++. +++.++|+.+.. .+.+|+... ...++.+.+. -...-.
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~-----f~~~~~~~~~----------------~~~kp~ 157 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADY-----FAFALCAEDL----------------GIGKPD 157 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGG-----CSEEEEHHHH----------------TCCTTS
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHH-----eeeeEEcccc----------------CCCCcC
Confidence 4779999999999998 999999987644 234454321 1111111110 012233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhhhCCcceeeC---CCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALKETDIGLSMG---IQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~AdvGIamg---~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
|+--..+.+.+.-..+.+.++||+. ||..|.+.|+++.++- ....+. +..+|+++. ++..+.+++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~--~l~el~~~l~ 227 (230)
T 3vay_A 158 PAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIH--NLSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEES--SGGGHHHHHH
T ss_pred HHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeEC--CHHHHHHHHH
Confidence 4333444455544456789999998 9999999999988872 122222 667899887 7888877664
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0037 Score=64.76 Aligned_cols=41 Identities=12% Similarity=-0.030 Sum_probs=35.4
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcC---CCHHHHHHHHHHcCCCC
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITG---DNVFTAKAIATECGILK 490 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTG---D~~~ta~~iA~~~GI~~ 490 (819)
+-|+++++|++++++|++++++|| ..........+++|+..
T Consensus 23 ~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 23 KIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 346899999999999999999988 77888888888899864
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0001 Score=72.92 Aligned_cols=104 Identities=12% Similarity=0.082 Sum_probs=63.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH-cCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE-CGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~-~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
++.|++.+.++.|++.|+++.++|+.....+..+.+. .|+... ...++.+.+. -...-
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~-----f~~~~~~~~~----------------~~~Kp 149 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA-----ADHIYLSQDL----------------GMRKP 149 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH-----CSEEEEHHHH----------------TCCTT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh-----eeeEEEeccc----------------CCCCC
Confidence 5679999999999999999999998654332222221 222110 0011111100 01122
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCCh
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGT 573 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt 573 (819)
.|+--..+.+.+.-..+.+.++||+.||..|.+.|++...+...+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~ 195 (206)
T 2b0c_A 150 EARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 195 (206)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred CHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCc
Confidence 3434445555555445678999999999999999999988773333
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.54 E-value=0.00092 Score=67.49 Aligned_cols=100 Identities=9% Similarity=-0.060 Sum_probs=68.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH------cCCCCCCCCCCccceecccccccCCHHHHHHHhhhhc
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE------CGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKIC 522 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~------~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 522 (819)
++.|++.++++.|++. +++.++|+.+...+..+.+. .|+... ...++.+.+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~-----fd~i~~~~~~---------------- 169 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDY-----FEKTYLSYEM---------------- 169 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHH-----CSEEEEHHHH----------------
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHh-----CCEEEeeccc----------------
Confidence 4679999999999999 99999999999888876633 444221 0111111110
Q ss_pred eeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCC
Q 003452 523 VMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGI 570 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~ 570 (819)
-...-.|+--..+.+.+.-..+.+.++||+.||..+.+.|+++..+..
T Consensus 170 ~~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~ 217 (229)
T 4dcc_A 170 KMAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPK 217 (229)
T ss_dssp TCCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCC
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEEC
Confidence 122334444445555555445678999999999999999999998873
|
| >4aqr_D Calcium-transporting ATPase 8, plasma membrane-TY; Ca-binding protein-hydrolase complex, plasma-membrane calciu; 1.95A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.00033 Score=53.52 Aligned_cols=26 Identities=15% Similarity=0.165 Sum_probs=22.6
Q ss_pred CCcccchhhhhhhhhcchhhhhhHHH
Q 003452 22 LNVPTKKWHSAFTKIYCSRTLLSLAE 47 (819)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 47 (819)
+.++++|||+|.+|+|++|||+..++
T Consensus 2 s~e~L~rWR~a~lVlNa~RRFR~t~d 27 (57)
T 4aqr_D 2 SIERLQQWRKAALVLNASRRFRYTLD 27 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhchHhhhhhhcc
Confidence 37889999999999999999975554
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0028 Score=69.90 Aligned_cols=138 Identities=15% Similarity=0.149 Sum_probs=83.8
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.+.++.|+++|+++.++|+.....+..+.+..|+...-. ...++.+.+... ..+..+...-...-.
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd---~~~Ivs~ddv~~-----~~~~~~~~kp~~KP~ 286 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFE---ADFIATASDVLE-----AENMYPQARPLGKPN 286 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSC---GGGEECHHHHHH-----HHHHSTTSCCCCTTS
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcC---CCEEEecccccc-----cccccccccCCCCCC
Confidence 678999999999999999999999999999999999999865210 013444333210 000000000011222
Q ss_pred HhhHHHHHHHHH--------------hCCCEEEEEcCCCCCHHHhhhCCcce-eeCCCCh-------HHHHhhcCEEEeC
Q 003452 529 PFDKLLMVQCLK--------------QKGHVVAVTRDGTNDAPALKETDIGL-SMGIQGT-------EVAKESSDIVILD 586 (819)
Q Consensus 529 P~~K~~iV~~L~--------------~~g~~Va~~GDG~ND~~aL~~AdvGI-amg~~gt-------~~ak~aaDivl~d 586 (819)
|+-=....+.+. -..+.+.|+||+.+|..|-++|++.. .+. .|. +.....+|+++.
T Consensus 287 P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~~ad~vi~- 364 (384)
T 1qyi_A 287 PFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHHADYVIN- 364 (384)
T ss_dssp THHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTTCSEEES-
T ss_pred HHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhcCCCEEEC-
Confidence 222111222111 12356899999999999999999753 333 221 222346899886
Q ss_pred CChhHHHHHHH
Q 003452 587 DNFASVARVLR 597 (819)
Q Consensus 587 d~f~~i~~~i~ 597 (819)
++..+..+++
T Consensus 365 -sl~eL~~~l~ 374 (384)
T 1qyi_A 365 -HLGELRGVLD 374 (384)
T ss_dssp -SGGGHHHHHS
T ss_pred -CHHHHHHHHH
Confidence 6887776653
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0009 Score=69.71 Aligned_cols=56 Identities=16% Similarity=0.266 Sum_probs=47.3
Q ss_pred hHHHHHHHHHhC--CCEEEEEcC----CCCCHHHhhhCC-cceeeCCCChHHHHhhcCEEEeCCC
Q 003452 531 DKLLMVQCLKQK--GHVVAVTRD----GTNDAPALKETD-IGLSMGIQGTEVAKESSDIVILDDN 588 (819)
Q Consensus 531 ~K~~iV~~L~~~--g~~Va~~GD----G~ND~~aL~~Ad-vGIamg~~gt~~ak~aaDivl~dd~ 588 (819)
+|..-++.| .. .+.|+++|| |.||.+||+.|+ +|++|+ ++.+..|+.||++..+++
T Consensus 197 sKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 197 DKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPETA 259 (262)
T ss_dssp STTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC-
T ss_pred CHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCCc
Confidence 688888888 22 467899999 999999999999 599998 999999999999876543
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0021 Score=66.76 Aligned_cols=85 Identities=11% Similarity=0.099 Sum_probs=64.6
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCH----HHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNV----FTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKIC 522 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~----~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 522 (819)
+.++.|++.+.++.|++.|+++.++||... ..+..-.+++||..... ..
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~---~~------------------------ 151 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND---KT------------------------ 151 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST---TT------------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc---ce------------------------
Confidence 467899999999999999999999999864 46677778899975210 01
Q ss_pred eeccCCHhhHHHHHHHHHhC-CCEEEEEcCCCCCHHH
Q 003452 523 VMARSSPFDKLLMVQCLKQK-GHVVAVTRDGTNDAPA 558 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~~~-g~~Va~~GDG~ND~~a 558 (819)
++-|....+|....+.+.+. -.+|+++||..+|.++
T Consensus 152 Lilr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 152 LLLKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp EEEESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred eEecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 23232335788888888875 4578899999999976
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0099 Score=58.99 Aligned_cols=120 Identities=9% Similarity=0.065 Sum_probs=74.0
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.++++.|+++|+++.++||.....+..+.. .. ...++.+.+.. ..+-.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~-------~d~v~~~~~~~----------------~~KP~ 89 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PV-------NDWMIAAPRPT----------------AGWPQ 89 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TT-------TTTCEECCCCS----------------SCTTS
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---cc-------CCEEEECCcCC----------------CCCCC
Confidence 567999999999999999999999998887755443 11 11222222210 11222
Q ss_pred HhhHHHHHHHHHhC-CCEEEEEcCCCCCHHHhhhCCc-ceeeCCCCh---------------------------HHHHhh
Q 003452 529 PFDKLLMVQCLKQK-GHVVAVTRDGTNDAPALKETDI-GLSMGIQGT---------------------------EVAKES 579 (819)
Q Consensus 529 P~~K~~iV~~L~~~-g~~Va~~GDG~ND~~aL~~Adv-GIamg~~gt---------------------------~~ak~a 579 (819)
|+-=....+.+.-. .+.+.|+||..+|..+=+.|++ .|++. .|. +.....
T Consensus 90 p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~-~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~ 168 (196)
T 2oda_A 90 PDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA-SCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLG 168 (196)
T ss_dssp THHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES-SSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc-cCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcC
Confidence 32222223333222 2568899999999999999997 33333 221 011235
Q ss_pred cCEEEeCCChhHHHHHHH
Q 003452 580 SDIVILDDNFASVARVLR 597 (819)
Q Consensus 580 aDivl~dd~f~~i~~~i~ 597 (819)
+|+++. ++..+..++.
T Consensus 169 ~d~vi~--~~~eL~~~l~ 184 (196)
T 2oda_A 169 VHSVID--HLGELESCLA 184 (196)
T ss_dssp CSEEES--SGGGHHHHHH
T ss_pred CCEEeC--CHHHHHHHHH
Confidence 888885 7888877664
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0015 Score=67.08 Aligned_cols=52 Identities=15% Similarity=0.213 Sum_probs=41.6
Q ss_pred hHHHHHHHH-HhCCCEEEEEcC----CCCCHHHhhhCCc-ceeeCCCChHHHHhhcCEE
Q 003452 531 DKLLMVQCL-KQKGHVVAVTRD----GTNDAPALKETDI-GLSMGIQGTEVAKESSDIV 583 (819)
Q Consensus 531 ~K~~iV~~L-~~~g~~Va~~GD----G~ND~~aL~~Adv-GIamg~~gt~~ak~aaDiv 583 (819)
+|..-++.| .-..+.|+++|| |.||.+||+.|+. |++|| ++.+..|+.||+|
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhc
Confidence 577666666 111467899999 9999999999988 99999 9999999999876
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.0089 Score=61.34 Aligned_cols=117 Identities=12% Similarity=0.217 Sum_probs=78.2
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
.++.|++.+.++.|++.|+++.+.|+.. .+..+-+.+|+... ...++.+.+.. ...-
T Consensus 115 ~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~-----Fd~i~~~~~~~----------------~~KP 171 (250)
T 4gib_A 115 NDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDK-----FDFIADAGKCK----------------NNKP 171 (250)
T ss_dssp GGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGG-----CSEECCGGGCC----------------SCTT
T ss_pred cccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccc-----cceeecccccC----------------CCCC
Confidence 3578999999999999999998877654 35567788898753 22333333321 1223
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc-ceeeCCCChHHHHhhcCEEEeCCChhHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI-GLSMGIQGTEVAKESSDIVILDDNFASV 592 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv-GIamg~~gt~~ak~aaDivl~dd~f~~i 592 (819)
.|+-=..+.+.+.-..+.+.|+||..+|..+-++|++ .|+++ +..+ ...||+++. ++..+
T Consensus 172 ~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~~--~~~ad~vi~--~l~eL 232 (250)
T 4gib_A 172 HPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVG-NYEN--LKKANLVVD--STNQL 232 (250)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES-CTTT--TTTSSEEES--SGGGC
T ss_pred cHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEEC-ChhH--hccCCEEEC--ChHhC
Confidence 3444444555554444668999999999999999998 45555 3322 245899886 55554
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.95 E-value=0.0039 Score=64.72 Aligned_cols=85 Identities=11% Similarity=0.071 Sum_probs=63.4
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCH----HHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNV----FTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKIC 522 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~----~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 522 (819)
++++.|++.+.++.|++.|+++.++||.+. ..+..-.++.||...+. ..
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~---~~------------------------ 151 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE---SA------------------------ 151 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG---GG------------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc---cc------------------------
Confidence 567899999999999999999999999864 46666677899975210 01
Q ss_pred eeccCCHhhHHHHHHHHHhCC-CEEEEEcCCCCCHHH
Q 003452 523 VMARSSPFDKLLMVQCLKQKG-HVVAVTRDGTNDAPA 558 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~~~g-~~Va~~GDG~ND~~a 558 (819)
++-|..-..|....+.+.+.| .+|+++||-.+|.++
T Consensus 152 Lilr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 152 FYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp EEEESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred eeccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 222322346777777887774 578899999999875
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.075 Score=54.15 Aligned_cols=41 Identities=12% Similarity=0.086 Sum_probs=36.2
Q ss_pred CCccHHHHHHHHHhcCCcEEEEc---CCCHHHHHHHHHHcCCCC
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMIT---GDNVFTAKAIATECGILK 490 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlT---GD~~~ta~~iA~~~GI~~ 490 (819)
+-+++.++++.+++.|+++.++| |..........+++|+..
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 45788999999999999999999 999998888888888754
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=95.84 E-value=0.021 Score=58.96 Aligned_cols=42 Identities=14% Similarity=0.227 Sum_probs=37.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEc---CCCHHHHHHHHHHcCCCCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMIT---GDNVFTAKAIATECGILKP 491 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlT---GD~~~ta~~iA~~~GI~~~ 491 (819)
++ |+++++|++++++|++++++| |..........+++|+...
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 45 899999999999999999999 8888888888899998643
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=95.67 E-value=0.047 Score=56.29 Aligned_cols=43 Identities=14% Similarity=0.060 Sum_probs=37.8
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEc---CCCHHHHHHHHHHcCCCC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMIT---GDNVFTAKAIATECGILK 490 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlT---GD~~~ta~~iA~~~GI~~ 490 (819)
+++-+++.++++++++.|+++.++| |..........+++|+..
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 4566889999999999999999999 889888888888888854
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.65 E-value=0.0075 Score=60.35 Aligned_cols=95 Identities=11% Similarity=0.032 Sum_probs=60.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.+.++.|+++|+++.++|+... .+..+.+.+|+...- ..++.+.+.. ..+-.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f-----~~~~~~~~~~----------------~~Kp~ 152 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYF-----DALALSYEIK----------------AVKPN 152 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGC-----SEEC---------------------------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHe-----eEEEeccccC----------------CCCCC
Confidence 4679999999999999999999999866 477888889986421 1122221110 11112
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCC-CHHHhhhCCcceee
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTN-DAPALKETDIGLSM 568 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~N-D~~aL~~AdvGIam 568 (819)
|+--..+.+.+.- .. .|+||+.+ |..+-+.|++....
T Consensus 153 ~~~~~~~~~~~~~--~~-~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 153 PKIFGFALAKVGY--PA-VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp CCHHHHHHHHHCS--SE-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHHHHHHHHcCC--Ce-EEEcCCchHhHHHHHHCCCeEEE
Confidence 2222223333321 22 89999999 99999999987553
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.028 Score=56.65 Aligned_cols=116 Identities=12% Similarity=0.162 Sum_probs=72.3
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-++.|++.+.++.|++.| ++.++|+.....+..+.+.+|+...-. .. +...
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~----~~-----------------------~~~~- 145 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVE----GR-----------------------VLIY- 145 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTT----TC-----------------------EEEE-
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcC----ee-----------------------EEec-
Confidence 368899999999999999 999999999888899989888753100 00 0000
Q ss_pred CHhhHHHHHHHHHh--CCCEEEEEcCCCC---CHHHhhhCCcc---eeeCCC--ChHHHHhh--cCEEEeCCChhHHHHH
Q 003452 528 SPFDKLLMVQCLKQ--KGHVVAVTRDGTN---DAPALKETDIG---LSMGIQ--GTEVAKES--SDIVILDDNFASVARV 595 (819)
Q Consensus 528 sP~~K~~iV~~L~~--~g~~Va~~GDG~N---D~~aL~~AdvG---Iamg~~--gt~~ak~a--aDivl~dd~f~~i~~~ 595 (819)
..|...++.+.+ ..+.+.|+||+.| |..+-+.|++. +.-|.. ..+..++. +|+++. ++..+.++
T Consensus 146 --~~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~--~~~el~~~ 221 (231)
T 2p11_A 146 --IHKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVE--RIGDLVEM 221 (231)
T ss_dssp --SSGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEES--SGGGGGGC
T ss_pred --CChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeec--CHHHHHHH
Confidence 112222222222 3467999999999 55555667753 333311 22233333 898885 56665544
Q ss_pred H
Q 003452 596 L 596 (819)
Q Consensus 596 i 596 (819)
+
T Consensus 222 l 222 (231)
T 2p11_A 222 D 222 (231)
T ss_dssp G
T ss_pred H
Confidence 3
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.93 E-value=0.014 Score=61.61 Aligned_cols=96 Identities=15% Similarity=0.044 Sum_probs=66.3
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHH---HHHHHH--------cCCCCCCCCCCccceecccccccCCHHHHH
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTA---KAIATE--------CGILKPGQDTSTGAVLEGEEFRNYTHEERM 515 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta---~~iA~~--------~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~ 515 (819)
++++.|++.++++.|+++|+++.++||.....+ ...-+. .|+.. ..++.+.+..
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~-------- 250 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL-------VMQCQREQGD-------- 250 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC-------SEEEECCTTC--------
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCc-------hheeeccCCC--------
Confidence 567899999999999999999999999875432 333334 68731 1222221111
Q ss_pred HHhhhhceeccCCHhhHHHHHHHHHhCC-CEEEEEcCCCCCHHHhhhCCcce
Q 003452 516 EKVDKICVMARSSPFDKLLMVQCLKQKG-HVVAVTRDGTNDAPALKETDIGL 566 (819)
Q Consensus 516 ~~~~~~~v~ar~sP~~K~~iV~~L~~~g-~~Va~~GDG~ND~~aL~~AdvGI 566 (819)
.+-.|+-|..+.+.+.... +.+.|+||..+|+.|-++|++-.
T Consensus 251 ---------~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~ 293 (301)
T 1ltq_A 251 ---------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 293 (301)
T ss_dssp ---------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred ---------CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeE
Confidence 1334667777777774443 34678999999999999998853
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=94.86 E-value=0.031 Score=56.12 Aligned_cols=43 Identities=9% Similarity=0.051 Sum_probs=31.2
Q ss_pred CCEEEEEcCC-CCCHHHhhhCCccee---eCCCChHHHH---hhcCEEEe
Q 003452 543 GHVVAVTRDG-TNDAPALKETDIGLS---MGIQGTEVAK---ESSDIVIL 585 (819)
Q Consensus 543 g~~Va~~GDG-~ND~~aL~~AdvGIa---mg~~gt~~ak---~aaDivl~ 585 (819)
.+.++++||+ .||..|++.|+++++ +|....+..+ ..+|+++.
T Consensus 193 ~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~ 242 (250)
T 2c4n_A 193 SEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYP 242 (250)
T ss_dssp GGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEES
T ss_pred cceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEEC
Confidence 4678999999 699999999998844 4522223333 46888875
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.66 E-value=0.0078 Score=58.54 Aligned_cols=96 Identities=18% Similarity=0.075 Sum_probs=60.9
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCCCccceecc----cccccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGD---------------NVFTAKAIATECGILKPGQDTSTGAVLEG----EEFRNY 509 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD---------------~~~ta~~iA~~~GI~~~~~~~~~~~vi~g----~~~~~~ 509 (819)
++.|++.++++.|++.|+++.++|+- ....+..+.+..|+.- ...+..+ .+..
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f------d~v~~s~~~~~~~~~-- 113 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQF------DEVLICPHLPADECD-- 113 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCE------EEEEEECCCGGGCCS--
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCe------eEEEEcCCCCccccc--
Confidence 57899999999999999999999997 4677788888888851 1122221 1110
Q ss_pred CHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcce
Q 003452 510 THEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGL 566 (819)
Q Consensus 510 ~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGI 566 (819)
...-.|+-=..+.+.+.-..+.+.|+||+.+|..+-+.|++..
T Consensus 114 --------------~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~ 156 (176)
T 2fpr_A 114 --------------CRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGING 156 (176)
T ss_dssp --------------SSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEE
T ss_pred --------------ccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeE
Confidence 0001111101112222222345889999999999999998853
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.57 E-value=0.02 Score=59.52 Aligned_cols=42 Identities=17% Similarity=0.177 Sum_probs=35.4
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCC---HHHHHHHHHHcCCC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDN---VFTAKAIATECGIL 489 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~---~~ta~~iA~~~GI~ 489 (819)
.++.|++.++++.|++.|+++.++||.. ...+...-+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 4678999999999999999999999988 44555556778986
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.28 E-value=0.07 Score=55.17 Aligned_cols=95 Identities=16% Similarity=0.156 Sum_probs=65.2
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHc---CCCCCCCCCCccceecccccccCCHHHHHHHhhhhcee
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATEC---GILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVM 524 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~---GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 524 (819)
-++.|++.++++.|+++|+++.++|..+...+..+-+.+ |+... ...++.+ +. .
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~-----fd~i~~~-~~-----------------~ 185 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL-----VDGHFDT-KI-----------------G 185 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG-----CSEEECG-GG-----------------C
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhh-----ccEEEec-CC-----------------C
Confidence 368899999999999999999999999988877776643 45432 1112222 11 1
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 525 ARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 525 ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
.+-.|+-=..+.+.+.-..+.+.|+||..+|+.+-++|++-
T Consensus 186 ~KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~ 226 (261)
T 1yns_A 186 HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVH 226 (261)
T ss_dssp CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCE
T ss_pred CCCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCE
Confidence 22233333344444544446799999999999999999974
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=93.94 E-value=0.038 Score=59.40 Aligned_cols=123 Identities=11% Similarity=0.054 Sum_probs=71.5
Q ss_pred eeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHc----CCCCCCCCCCccceecccc-cccCC-HHHHHHH--
Q 003452 446 IKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATEC----GILKPGQDTSTGAVLEGEE-FRNYT-HEERMEK-- 517 (819)
Q Consensus 446 i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~----GI~~~~~~~~~~~vi~g~~-~~~~~-~~~~~~~-- 517 (819)
....+.|+..+.++.++++|++|+++||-+...++.+|... ||..+..- .....++... -.... ..+..+-
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~Vi-G~~~~~~~~~~~~~~~~~~~~~dg~y 218 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVI-GVTTLLKNRKTGELTTARKQIAEGKY 218 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEE-EECEEEECTTTCCEECHHHHHHTTCC
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeE-eeeeeeeccccccccccccccccccc
Confidence 34457899999999999999999999999999999999984 66542100 0000011000 00000 0000000
Q ss_pred ----hhhhcee-----ccCCHhhHHHHHHHHHhCC-CEEEEEcCCC-CCHHHhhh--CCcceeeC
Q 003452 518 ----VDKICVM-----ARSSPFDKLLMVQCLKQKG-HVVAVTRDGT-NDAPALKE--TDIGLSMG 569 (819)
Q Consensus 518 ----~~~~~v~-----ar~sP~~K~~iV~~L~~~g-~~Va~~GDG~-ND~~aL~~--AdvGIamg 569 (819)
..+..+. -.+--+-|...++.....| ..+++.||+. .|.+||.. ++.|+++-
T Consensus 219 ~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~ 283 (327)
T 4as2_A 219 DPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLW 283 (327)
T ss_dssp CGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEE
T ss_pred cccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEE
Confidence 0000011 1122457877777765443 5678889994 79999965 55555544
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=92.37 E-value=0.096 Score=53.26 Aligned_cols=110 Identities=11% Similarity=0.181 Sum_probs=71.1
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
.++.|++.+.++.|++.|+++.++|.... +..+-+.+|+... ...++.+.+.. ..+-
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~-----fd~i~~~~~~~----------------~~KP 150 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREF-----FTFCADASQLK----------------NSKP 150 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGG-----CSEECCGGGCS----------------SCTT
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccc-----ccccccccccc----------------CCCC
Confidence 35789999999999999999999997653 4556778888653 22333333321 1222
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc-eeeCCCChHHHHhhcCEEEe
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG-LSMGIQGTEVAKESSDIVIL 585 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG-Iamg~~gt~~ak~aaDivl~ 585 (819)
.|+-=....+.+.-..+.+.|+||..+|+.+-++|++- |+++ .| ...+|.++.
T Consensus 151 ~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~-~g----~~~ad~~~~ 204 (243)
T 4g9b_A 151 DPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIG-AG----LTGAQLLLP 204 (243)
T ss_dssp STHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEES-TT----CCSCSEEES
T ss_pred cHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEEC-CC----CCcHHHhcC
Confidence 33333334444444456789999999999999999873 3333 33 123666654
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=92.34 E-value=0.64 Score=46.94 Aligned_cols=43 Identities=14% Similarity=0.187 Sum_probs=32.7
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEc---CCCHHHHHHHHHHcCCCC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMIT---GDNVFTAKAIATECGILK 490 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlT---GD~~~ta~~iA~~~GI~~ 490 (819)
++.-+++.++++.+++.|+++.++| |.........-++.|+..
T Consensus 22 ~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 22 DAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp --CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 3444788999999999999999999 666666666666778754
|
| >2l1w_B Vacuolar calcium ATPase BCA1 peptide; calmodulin, calmodulin complex, soybean calmodulin, vacuolar ATPase, metal binding protein; NMR {Glycine max} | Back alignment and structure |
|---|
Probab=92.22 E-value=0.033 Score=35.95 Aligned_cols=23 Identities=13% Similarity=0.339 Sum_probs=19.0
Q ss_pred ccchhhhhh-hhhcchhhhhhHHH
Q 003452 25 PTKKWHSAF-TKIYCSRTLLSLAE 47 (819)
Q Consensus 25 ~~~~~~~~~-~~~~~~~~~~~~~~ 47 (819)
+++|||+|+ +++|+.|+|...++
T Consensus 1 al~rWR~a~~~v~n~~rrfr~~~~ 24 (26)
T 2l1w_B 1 ARQRWRSSVSIVKNRARRFRMISN 24 (26)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CchhHHHHHHHHhCcccccccccc
Confidence 478999998 88999999876654
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=88.74 E-value=0.058 Score=54.04 Aligned_cols=86 Identities=17% Similarity=0.178 Sum_probs=53.3
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHH----HHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceec
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKA----IATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA 525 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~----iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a 525 (819)
+.|++.+.++.|+++|+++.++|+.....+.. +.+..+... .|.+. ..+.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~-----------~~~~~---------------~~~~ 142 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA-----------TNMNP---------------VIFA 142 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT-----------TTBCC---------------CEEC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc-----------cccch---------------hhhc
Confidence 46799999999999999999999986433322 222222210 00000 0011
Q ss_pred --cCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc
Q 003452 526 --RSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 526 --r~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
.-.|+-. .+.+++.|- +.|+||..+|..+-+.|++-
T Consensus 143 ~~KP~p~~~---~~~~~~~g~-~l~VGDs~~Di~aA~~aG~~ 180 (211)
T 2b82_A 143 GDKPGQNTK---SQWLQDKNI-RIFYGDSDNDITAARDVGAR 180 (211)
T ss_dssp CCCTTCCCS---HHHHHHTTE-EEEEESSHHHHHHHHHTTCE
T ss_pred CCCCCHHHH---HHHHHHCCC-EEEEECCHHHHHHHHHCCCe
Confidence 1123322 333444454 99999999999999999975
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=88.46 E-value=0.44 Score=53.59 Aligned_cols=98 Identities=11% Similarity=0.089 Sum_probs=61.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCC------CHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhc
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGD------NVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKIC 522 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD------~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 522 (819)
++.|++.++++.|+++|+++.++|+- ......... .|+... ...++.+.+..
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~--~~l~~~-----fd~i~~~~~~~--------------- 157 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM--CELKMH-----FDFLIESCQVG--------------- 157 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH--HHHHTT-----SSEEEEHHHHT---------------
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh--hhhhhh-----eeEEEeccccC---------------
Confidence 57899999999999999999999995 222222221 133221 12233333221
Q ss_pred eeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeC
Q 003452 523 VMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMG 569 (819)
Q Consensus 523 v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg 569 (819)
..+-.|+-=..+.+.+.-..+.+.|+||..||..+-+.|++....-
T Consensus 158 -~~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 158 -MVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp -CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred -CCCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 1223344434444555444466888899999999999999976554
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=87.37 E-value=0.27 Score=51.84 Aligned_cols=53 Identities=13% Similarity=0.056 Sum_probs=37.0
Q ss_pred CEEEEEcCCC-CCHHHhhhCCcceeeCCCC---hHHHH---------hhcCEEEeCCChhHHHHHHHH
Q 003452 544 HVVAVTRDGT-NDAPALKETDIGLSMGIQG---TEVAK---------ESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 544 ~~Va~~GDG~-ND~~aL~~AdvGIamg~~g---t~~ak---------~aaDivl~dd~f~~i~~~i~~ 598 (819)
+.++|+||+. ||..|.+.|++...+-..| .+..+ ..+|+++. ++..+.+.++.
T Consensus 233 ~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~--~l~el~~~l~~ 298 (306)
T 2oyc_A 233 ARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVE--SIADLTEGLED 298 (306)
T ss_dssp GGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEES--SGGGGGGGC--
T ss_pred HHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEEC--CHHHHHHHHHh
Confidence 5689999996 9999999999987762122 22222 35788886 77877776665
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=85.06 E-value=0.95 Score=42.23 Aligned_cols=41 Identities=10% Similarity=-0.074 Sum_probs=34.9
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCC---HHHHHHHHHHcCCCC
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDN---VFTAKAIATECGILK 490 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~---~~ta~~iA~~~GI~~ 490 (819)
+-|++.+++++++++|++++++||++ ...+....++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 34789999999999999999999998 566677778888864
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=84.45 E-value=0.014 Score=57.37 Aligned_cols=41 Identities=12% Similarity=0.058 Sum_probs=34.8
Q ss_pred CCCCccHHHHHHHHHhc-CCcEEEEcCCCHHHHHHHHHHcCC
Q 003452 448 DPCRPGVKKAVEDCQYA-GVNIKMITGDNVFTAKAIATECGI 488 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~a-GI~v~mlTGD~~~ta~~iA~~~GI 488 (819)
-++.|++.++++.|+++ |+++.++|+.....+..+.+.+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 36789999999999999 999999999887777666666665
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=83.89 E-value=0.74 Score=51.02 Aligned_cols=40 Identities=15% Similarity=0.247 Sum_probs=34.0
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCC------------HHHHHHHHHHcCCC
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDN------------VFTAKAIATECGIL 489 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~------------~~ta~~iA~~~GI~ 489 (819)
+-|++.++++.|+++|+++.++|+.. ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999955 23377788889984
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=83.88 E-value=1.7 Score=44.04 Aligned_cols=84 Identities=14% Similarity=0.138 Sum_probs=56.5
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceec-cC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA-RS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a-r~ 527 (819)
.+.+.+.++++++++.|+++.+.||++...+..+.+++|+.. .....|..... .. + .++. ..
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~-------~i~~nGa~i~~-~~--------~-~i~~~~~ 82 (258)
T 2pq0_A 20 QLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDS-------FVSFNGQYVVF-EG--------N-VLYKQPL 82 (258)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCC-------EEEGGGTEEEE-TT--------E-EEEECCC
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCE-------EEECCCCEEEE-CC--------E-EEEEecC
Confidence 467889999999999999999999999999999999988742 12223332211 00 0 0222 34
Q ss_pred CHhhHHHHHHHHHhCCCEEEEE
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVT 549 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~ 549 (819)
+++.-.++++.+++.|..+++.
T Consensus 83 ~~~~~~~i~~~~~~~~~~~~~~ 104 (258)
T 2pq0_A 83 RREKVRALTEEAHKNGHPLVFM 104 (258)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHHHhCCCeEEEE
Confidence 5556667788888876555444
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=83.81 E-value=1.3 Score=45.13 Aligned_cols=52 Identities=13% Similarity=0.148 Sum_probs=33.3
Q ss_pred HHHHHHHhCCCEEEEEcCC-CCCHHHhhhCCcc---eeeCCCChHHHHh---hcCEEEe
Q 003452 534 LMVQCLKQKGHVVAVTRDG-TNDAPALKETDIG---LSMGIQGTEVAKE---SSDIVIL 585 (819)
Q Consensus 534 ~iV~~L~~~g~~Va~~GDG-~ND~~aL~~AdvG---Iamg~~gt~~ak~---aaDivl~ 585 (819)
.+.+.+.-..+.+.|+||+ .||..+.+.|++. +..|....+..++ .+|+++.
T Consensus 191 ~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~ 249 (264)
T 1yv9_A 191 RAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVD 249 (264)
T ss_dssp HHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEES
T ss_pred HHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEe
Confidence 3344443334579999999 6999999999986 4455222222222 5888875
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=82.31 E-value=1.4 Score=41.68 Aligned_cols=131 Identities=15% Similarity=0.136 Sum_probs=67.5
Q ss_pred eccccccceEEEEEEE-eC-CcChHHHHHHHhhhcCCCCChhHHHHHHHHhhHhHHHHHHHHHH---H-HHHhccCCC--
Q 003452 288 SGTKVADGYARMLATS-VG-MNTTWGQMMSQISRDNSEQTPLQARLNKLTSSTGKIGLAVAFLV---L-AVLLKKTDN-- 359 (819)
Q Consensus 288 sGt~v~~G~~~~~V~~-vG-~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~~~~~~l~~a~l~---~-~v~~~~~~~-- 359 (819)
+||+-....-..-+.. .| .+..+-+++..++ ...+.|+-+.+-..++--. ++-..-.- + +.-+....|
T Consensus 14 ~~tit~gnr~vt~v~~~~g~~e~elL~lAAs~E--~~SeHPla~AIv~~A~~~~--~l~~~~~~~~~~~~~~F~a~~G~~ 89 (156)
T 1svj_A 14 SGHGGRHNRQASEFIPAQGVDEKTLADAAQLAS--LADETPEGRSIVILAKQRF--NLRERDVQSLHATFVPFTAQSRMS 89 (156)
T ss_dssp -------CEEEEEEEECTTSCHHHHHHHHHHTT--SSCCSHHHHHHHHHHHHHT--TCCCCCHHHHTCEEEEEETTTTEE
T ss_pred CCceecCCCeEEEEEecCCCCHHHHHHHHHHHh--CcCCCHHHHHHHHHHHHhc--CCCcccccccccceeeccccCCCC
Confidence 5665544433333322 23 2344555566554 4567999988876665320 00000000 0 000011111
Q ss_pred ce----EEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccchhhhhhhcc
Q 003452 360 TS----HVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIE 435 (819)
Q Consensus 360 ~~----~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e 435 (819)
++ ..+.+|+++.|.+.+.. .|.. +++ .+.+.++.++.+|.+++.+|.
T Consensus 90 Gv~v~G~~v~vGn~~~i~~l~~~----~gi~--~~~----~~~~~~~~la~~G~T~v~VA~------------------- 140 (156)
T 1svj_A 90 GINIDNRMIRKGSVDAIRRHVEA----NGGH--FPT----DVDQKVDQVARQGATPLVVVE------------------- 140 (156)
T ss_dssp EEEETTEEEEEEEHHHHHHHHHH----HTCC--CCH----HHHHHHHHHHHTTCEEEEEEE-------------------
T ss_pred eEEECCEEEEEeCcHHHHHHHHH----cCCC--CcH----HHHHHHHHHHhCCCCEEEEEE-------------------
Confidence 11 24678998877666643 1211 121 356677888999999999983
Q ss_pred cCcEEEEEEEeeCCCCc
Q 003452 436 DNLTLLGLVGIKDPCRP 452 (819)
Q Consensus 436 ~~l~~lG~v~i~D~lr~ 452 (819)
|..++|++++.|++||
T Consensus 141 -d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 141 -GSRVLGVIALKDIVKG 156 (156)
T ss_dssp -TTEEEEEEEEEECCCC
T ss_pred -CCEEEEEEEEecCCCC
Confidence 2468999999999997
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 819 | ||||
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 3e-41 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 1e-13 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 5e-39 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 6e-23 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 8e-22 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 4e-19 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-16 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 4e-16 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 1e-13 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 5e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-04 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 3e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 0.002 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 155 bits (394), Expect = 3e-41
Identities = 58/280 (20%), Positives = 106/280 (37%), Gaps = 39/280 (13%)
Query: 557 PALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTA 616
P I + + +AK+++ + L V GR ++ N+++ I++ +++
Sbjct: 193 PEGLPAVITTCLALGTRRMAKKNAIVRSLPS-------VETLGRAIYNNMKQFIRYLISS 245
Query: 617 NVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALATEKPTKELMDKPPVGRTEP 676
NV ++ F+ A L VQLLWVNL+ D L A AL P ++MD+PP EP
Sbjct: 246 NVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEP 305
Query: 677 LITNIMWRNLVAQALYQRAVLLTL------------------------------QFRGES 706
LI+ ++ +A Y A + F G
Sbjct: 306 LISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLD 365
Query: 707 IFGVNKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQ--V 764
T+ + V ++ N N+ + + N LG I ++ L +
Sbjct: 366 CEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLI 425
Query: 765 VMVEFLKNFADTERLNWGQWSACIGFAAASWPIGWLVKCI 804
+ V+ L + L+ QW + + + ++K I
Sbjct: 426 LYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 465
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 72.0 bits (176), Expect = 1e-13
Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 5/147 (3%)
Query: 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILIL 159
+ G+ + R E + N KSL+ V++ +DL + IL
Sbjct: 8 STEECLAYFGVSETTGL--TPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRIL 65
Query: 160 LGCAVLSLAFGIKEHG--LKEGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNN 217
L A +S E G + E IL+ + V + +
Sbjct: 66 LLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEY-EP 124
Query: 218 IQIDVIRNGRRQQISIFEIVVGDVICL 244
+ + +Q++ F + VI L
Sbjct: 125 AATEQDKTPLQQKLDEFGEQLSKVISL 151
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 140 bits (353), Expect = 5e-39
Identities = 60/167 (35%), Positives = 91/167 (54%), Gaps = 2/167 (1%)
Query: 433 LIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPG 492
+I + T DP R V +++ C+ AG+ + MITGDN TA AI GI
Sbjct: 4 VICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGEN 63
Query: 493 QDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDG 552
++ + G EF + E+ E + C AR P K +V+ L+ + A+T DG
Sbjct: 64 EEVA-DRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDG 122
Query: 553 TNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWG 599
NDAPALK+ +IG++MG GT VAK +S++V+ DDNF+++ + G
Sbjct: 123 VNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 93.2 bits (231), Expect = 6e-23
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 34/161 (21%)
Query: 437 NLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTS 496
+ T G D + K AV++ + G+ + MITGDN +A+A
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEA--------------- 53
Query: 497 TGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDA 556
+++ V+A P K V+ L Q VVA DG NDA
Sbjct: 54 -----------------ISRELNLDLVIAEVLPHQKSEEVKKL-QAKEVVAFVGDGINDA 95
Query: 557 PALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597
PAL + D+G+++G G++VA ES DIV++ D+ V ++
Sbjct: 96 PALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 96.0 bits (238), Expect = 8e-22
Identities = 33/223 (14%), Positives = 63/223 (28%), Gaps = 25/223 (11%)
Query: 389 LDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKD 448
+ D + + +A + K + E + + G + +
Sbjct: 161 VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIART--------TFKTGYIYQEI 212
Query: 449 PC--RPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILK---PGQDTSTGAVLEG 503
VK + D + AG + + TG G+L + VLE
Sbjct: 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA 272
Query: 504 EEFRNYTHEERMEKVD---KICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALK 560
E ++ + Q V + D D + +
Sbjct: 273 ENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQ 332
Query: 561 ETD---IGLSMGIQGTEVAKE----SSDIVILDDNFASVARVL 596
+ IG G++G + A E +D VI ++ + VL
Sbjct: 333 KIGATFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGVL 373
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 81.3 bits (200), Expect = 4e-19
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 15/111 (13%)
Query: 222 VIRNGRR--QQISIFEIVVGDVICLKIGDQVPANGLFLDGH--SLQVDESSMTGESDHV- 276
V R R+ Q+I +IV GD++ + +GD+VPA+ L +L+VD+S +TGES V
Sbjct: 5 VYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVI 64
Query: 277 ----------EVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQI 317
VN + LFSGT +A G A + + G++T G++ Q+
Sbjct: 65 KHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 77.6 bits (190), Expect = 1e-16
Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Query: 362 HVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPE 421
+ KGA E IL CSS G LD ++ FQ + R + F +P
Sbjct: 119 VLVMKGAPERILDRCSSILVQ-GKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPS 177
Query: 422 EE----HRNEKDQKKLIEDNLTLLGLVGIKDPCRP 452
+ + + D+ + L +GL+ + D
Sbjct: 178 GKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHH 212
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 76.5 bits (187), Expect = 4e-16
Identities = 21/97 (21%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 355 KKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQ--GMASSSLRCI 412
+ + + KGA E ++ C+ + KE+ +I+ G +LRC+
Sbjct: 144 SRAAVGNKMFVKGAPEGVIDRCNYVRVG-TTRVPMTGPVKEKILSVIKEWGTGRDTLRCL 202
Query: 413 AFAHKQVPEEEH---RNEKDQKKLIEDNLTLLGLVGI 446
A A + P + ++ + E +LT +G+VG+
Sbjct: 203 ALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 69.2 bits (168), Expect = 1e-13
Identities = 17/158 (10%), Positives = 44/158 (27%), Gaps = 9/158 (5%)
Query: 451 RPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYT 510
R G ++ V + +I+G F + + +
Sbjct: 77 REGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR--------IYCNHASFDND 128
Query: 511 HEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGI 570
+ + K ++ L + + + D D A K +D+ +
Sbjct: 129 YIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY 188
Query: 571 QGTEVAKESSDIVILDDNFASVARVLRWGRCVHTNIQK 608
+E + + +F + + + + V +Q
Sbjct: 189 -LLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.1 bits (116), Expect = 5e-07
Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 10/137 (7%)
Query: 451 RPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYT 510
PG+++ V Q V + +I+G + +A++ L+ Y
Sbjct: 84 TPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLN---IPATNVFANRLKFYFNGEYA 140
Query: 511 HEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMG- 569
D+ A S K++ + K + + DG D A D + G
Sbjct: 141 ------GFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGG 194
Query: 570 IQGTEVAKESSDIVILD 586
+ K+++ I D
Sbjct: 195 NVIRQQVKDNAKWYITD 211
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 42.3 bits (98), Expect = 1e-04
Identities = 34/211 (16%), Positives = 59/211 (27%), Gaps = 56/211 (26%)
Query: 443 LVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQ--------- 493
+ +A+ + G+ I ++TG+ V A+A + G P
Sbjct: 13 ITYPNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISY 72
Query: 494 ----------------------------------DTSTGAVLEGEEFRNYTHEERMEKVD 519
D G V+ E T E + +++
Sbjct: 73 KKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELN 132
Query: 520 KICVMARS------------SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS 567
V S + L K VA DG ND A K ++
Sbjct: 133 LNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVA 192
Query: 568 MGIQGTEVAKESSDIVILDDNFASVARVLRW 598
+ Q ++ KE++D V + A +
Sbjct: 193 VA-QAPKILKENADYVTKKEYGEGGAEAIYH 222
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 40.6 bits (94), Expect = 3e-04
Identities = 15/90 (16%), Positives = 25/90 (27%), Gaps = 2/90 (2%)
Query: 508 NYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLS 567
H+ ++ D++ K V K + V D ND L E G+
Sbjct: 110 LLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGIL 169
Query: 568 MGIQGTEVAKESSDIVILDDNFASVARVLR 597
V +E + + R
Sbjct: 170 FH-APENVIREFPQF-PAVHTYEDLKREFL 197
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 38.8 bits (89), Expect = 0.002
Identities = 37/227 (16%), Positives = 70/227 (30%), Gaps = 5/227 (2%)
Query: 371 MILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQ 430
+I A + +D G + + + +K+R I+ + S + F + ++ E
Sbjct: 61 VISANGAVIHDPEGRLYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLD 120
Query: 431 KKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILK 490
+L V+ + Y ++ D I +
Sbjct: 121 VELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKE 180
Query: 491 PGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTR 550
+ + + E E + A K L Q AV
Sbjct: 181 KLEAGWKRYEHAEDLTLVSSAEHNFELSSR---KASKGQALKRLAKQLNIPLEETAAVG- 236
Query: 551 DGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597
D ND L+ G++MG E K +D V L ++ VA +++
Sbjct: 237 DSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 282
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 819 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 100.0 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.96 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.92 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.77 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.5 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.26 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.15 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.0 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.97 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.96 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.96 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.94 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.93 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.92 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.84 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.74 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.73 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.73 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.66 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.65 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.44 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.38 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.73 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.65 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.61 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.41 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.41 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.33 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.26 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.98 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.76 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.53 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.35 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.32 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.2 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 95.98 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.79 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.61 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.58 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.94 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.84 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 94.43 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 94.01 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 93.64 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 93.3 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 93.09 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 91.96 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 91.82 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 90.43 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 90.43 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 90.29 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 89.03 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 87.99 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 82.42 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=5e-42 Score=391.09 Aligned_cols=425 Identities=21% Similarity=0.291 Sum_probs=327.1
Q ss_pred CHHHHHHHhCCCcCCCCCccHHHHHHHHHhcCCCccCCCCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCcc--
Q 003452 100 GIRGVASALETDFDAGIFGNDQDIARRHEAFSSNTYKKPPSKSLFYFVVDALKDLTILILLGCAVLSLAFGIKEHGLK-- 177 (819)
Q Consensus 100 gv~gl~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~~il~v~a~~s~~~g~~~~g~~-- 177 (819)
+++++++.|+||+++|||++| +++|+++||+|++++++++|+|+.++++|+|+++++|+++|++|+++|...++..
T Consensus 8 ~~e~v~~~l~td~~~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 85 (472)
T d1wpga4 8 STEECLAYFGVSETTGLTPDQ--VKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETI 85 (472)
T ss_dssp CHHHHHHHHTCCTTTCBCHHH--HHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTSTT
T ss_pred CHHHHHHHhCcCcccCcCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 799999999999999999987 9999999999999999999999999999999999999999999999998765443
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcccCCcceEEEeCCEEEEEecCccccCCEEEEecCCeeccceEEE
Q 003452 178 EGWYEGGSILVAVFLVIAVSAGSNFTQNRQFDKFSKVSNNIQIDVIRNGRRQQISIFEIVVGDVICLKIGDQVPANGLFL 257 (819)
Q Consensus 178 ~~~~~~~~i~~~v~l~~~v~~~~~~~~~~~~~~l~~~~~~~~~~V~RdG~~~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll 257 (819)
..|+|+++|+++++++..++.++|++.++..+++.+.....
T Consensus 86 ~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~--------------------------------------- 126 (472)
T d1wpga4 86 TAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA--------------------------------------- 126 (472)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC---------------------------------------
T ss_pred hhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc---------------------------------------
Confidence 47999999999999999999999999999998887653221
Q ss_pred eccceeEecccccCCCceeeecCCCCCeEeeccccccceEEEEEEEeCCcChHHHHHHHhhhcCCCCChhHHHHHHHHhh
Q 003452 258 DGHSLQVDESSMTGESDHVEVNSSQNPFLFSGTKVADGYARMLATSVGMNTTWGQMMSQISRDNSEQTPLQARLNKLTSS 337 (819)
Q Consensus 258 ~g~~l~VDES~LTGES~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 337 (819)
...+++|+|.++++++..
T Consensus 127 --------------------------------------------------------------~~~~~~P~d~~l~~~g~~ 144 (472)
T d1wpga4 127 --------------------------------------------------------------TEQDKTPLQQKLDEFGEQ 144 (472)
T ss_dssp --------------------------------------------------------------CCCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------------------------ccccCchHHHHHHHHHHH
Confidence 012357888888888888
Q ss_pred HhHHHHHHHHHHHHHHhccCCCceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecc
Q 003452 338 TGKIGLAVAFLVLAVLLKKTDNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHK 417 (819)
Q Consensus 338 ~~~~~l~~a~l~~~v~~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~ 417 (819)
++..+..++...+......-.. .+. +
T Consensus 145 i~~~~~~~~~~~~~~~~~~~~~----------------------------~~~-----------------~--------- 170 (472)
T d1wpga4 145 LSKVISLICVAVWLINIGHFND----------------------------PVH-----------------G--------- 170 (472)
T ss_dssp HHHHHHHHHHHHHHHCCTTSSS----------------------------CCS-----------------S---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----------------------------HHh-----------------h---------
Confidence 8777766665555432100000 000 0
Q ss_pred cCCcccccchhhhhhhcccCcEEEEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCc
Q 003452 418 QVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTST 497 (819)
Q Consensus 418 ~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~ 497 (819)
.+... ... +. ...|..++ ++
T Consensus 171 ---~~~~~------~~~---------------------~~------------------~~~ai~l~--V~---------- 190 (472)
T d1wpga4 171 ---GSWIR------GAI---------------------YY------------------FKIAVALA--VA---------- 190 (472)
T ss_dssp ---SCSSS------CGG---------------------GH------------------HHHHHHHH--HH----------
T ss_pred ---hhhHH------HHH---------------------HH------------------HHHHHHHH--HH----------
Confidence 00000 000 00 00111111 11
Q ss_pred cceecccccccCCHHHHHHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHH
Q 003452 498 GAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAK 577 (819)
Q Consensus 498 ~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak 577 (819)
.-||.--.++. +..|+| ....+|
T Consensus 191 -----------------------------~iPEgLp~~vt--------------------------i~La~~--~~rmak 213 (472)
T d1wpga4 191 -----------------------------AIPEGLPAVIT--------------------------TCLALG--TRRMAK 213 (472)
T ss_dssp -----------------------------HSCTTHHHHHH--------------------------HHHHHH--HHHHHT
T ss_pred -----------------------------hChhhHHHHHH--------------------------HHHHHH--HHHHHh
Confidence 11333322222 111222 333444
Q ss_pred hhcCEEEeCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHhhhhhHhHhhhc
Q 003452 578 ESSDIVILDDNFASVARVLRWGRCVHTNIQKLIQFQLTANVAALLINFVAAVYAGEIPLTAVQLLWVNLIMDTLGALALA 657 (819)
Q Consensus 578 ~aaDivl~dd~f~~i~~~i~~gR~~~~ni~k~i~f~l~~nv~~i~~~~~~~~~~~~~pl~~~qll~vnli~d~l~alal~ 657 (819)
+.+ ++ .++.++.. .||.++.|++|+++|.++.|+..+...+++.++..+.|+++.|+||+|+++|.+|+++|+
T Consensus 214 ~~~--lV--r~L~avE~---~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~ 286 (472)
T d1wpga4 214 KNA--IV--RSLPSVET---LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALG 286 (472)
T ss_dssp TTE--EE--SCTTHHHH---HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHT
T ss_pred ccc--hh--hhHHHHHH---HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcCCCccccHHHHHHHHHHhHHHHHHHHh
Confidence 333 22 26666655 599999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcccccCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhccccCC---------------------------
Q 003452 658 TEKPTKELMDKPPVGRTEPLITNIMWRNLVAQALYQRAVLLTLQFRGESIFGV--------------------------- 710 (819)
Q Consensus 658 ~e~p~~~lm~~~P~~r~~~li~~~~~~~i~~~~~~~~~v~~~l~~~~~~~~~~--------------------------- 710 (819)
+|||++++|++||++++++++++.||++++.++.+.....+.++++...+...
T Consensus 287 ~ep~d~~iM~~~Pr~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (472)
T d1wpga4 287 FNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDC 366 (472)
T ss_dssp TCCCCSGGGGSCCCCTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCG
T ss_pred cCCCchhhhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccch
Confidence 99999999999999999999999999999999998887666554433211100
Q ss_pred ---cchhhhHHHHHHHHHHHHHHHHhhhccccccccccccchHHHHHHHHHHHHHHHHHH--HHHhHccccccCChhhHH
Q 003452 711 ---NKKVKETLIFNTFVLCQVFNEFNARKLEKKNVFEGIHKNRLFLGIIGTTIVLQVVMV--EFLKNFADTERLNWGQWS 785 (819)
Q Consensus 711 ---~~~~~~T~~f~~~v~~q~~n~~~~r~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~v--~~~~~~f~~~~l~~~~w~ 785 (819)
+....+|++|++++++|++|.+++|+.+...+.+++++|+++++++++++++|++++ ++++.+|++.||++.+|+
T Consensus 367 ~~~~~~~a~T~~F~~lv~~q~~~~~~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~l~~vf~~~pL~~~~w~ 446 (472)
T d1wpga4 367 EIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWL 446 (472)
T ss_dssp GGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTTTHHHHTCCCCCHHHHH
T ss_pred hhhhHhHHHHHHHHHHHHHHHHHHHHHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCCCHHHHH
Confidence 134578999999999999999999996544445589999999999999888887775 568899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcc
Q 003452 786 ACIGFAAASWPIGWLVKCIP 805 (819)
Q Consensus 786 ~~~~~~~~~~~~~~~~k~i~ 805 (819)
++++++++.+++.++.|++.
T Consensus 447 i~l~~~~~~~~~~El~K~~~ 466 (472)
T d1wpga4 447 MVLKISLPVIGLDEILKFIA 466 (472)
T ss_dssp HHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999986
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=7.6e-35 Score=284.05 Aligned_cols=150 Identities=39% Similarity=0.629 Sum_probs=143.7
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
||+||+++++|+.|+++||+|+|+|||+..||+++|+++||...+.+. ....++|.+++.++..+..+..++..+|+|+
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV-ADRAYTGREFDDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCC-TTTEEEHHHHHHSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCcccc-ccccccccccchhhHHHHhhhhhhhhhhhcc
Confidence 999999999999999999999999999999999999999998765433 3467899999999999999999999999999
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWG 599 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~g 599 (819)
+|+||..+|+.||++|++|+|+|||+||+|||++|||||+|+ +++++|+++||+++++++|+.|+++|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999 89999999999999999999999999998
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.96 E-value=1.4e-29 Score=236.98 Aligned_cols=123 Identities=38% Similarity=0.553 Sum_probs=108.5
Q ss_pred EEEEEeeCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhh
Q 003452 441 LGLVGIKDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDK 520 (819)
Q Consensus 441 lG~v~i~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~ 520 (819)
.+.++++|++||+++++|+.|+++||+++|+|||+..+|.++|++|||..
T Consensus 13 ~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~------------------------------ 62 (135)
T d2b8ea1 13 TLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------------------------------ 62 (135)
T ss_dssp CCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE------------------------------
T ss_pred EEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh------------------------------
Confidence 34678999999999999999999999999999999999999999999965
Q ss_pred hceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 521 ICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 521 ~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
++++++|++|.++++.+|+. ++|+|+|||.||+|||++|||||+|+ +++++++++||+++++++|++|+++++
T Consensus 63 --v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 63 --VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp --EECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred --hccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 89999999999999999865 68999999999999999999999999 899999999999999999999998874
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.92 E-value=5.1e-26 Score=205.80 Aligned_cols=99 Identities=36% Similarity=0.536 Sum_probs=90.2
Q ss_pred ceEEEeCCEE--EEEecCccccCCEEEEecCCeeccceEEEec--cceeEecccccCCCceeeecCC-----------CC
Q 003452 219 QIDVIRNGRR--QQISIFEIVVGDVICLKIGDQVPANGLFLDG--HSLQVDESSMTGESDHVEVNSS-----------QN 283 (819)
Q Consensus 219 ~~~V~RdG~~--~~i~~~~LvvGDiV~l~~Gd~VPaDg~ll~g--~~l~VDES~LTGES~pv~k~~~-----------~~ 283 (819)
.++|+|+|++ ++|+++||||||+|.|++||+|||||+|+++ .++.||||+|||||.|+.|.+. ..
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 4789999985 7899999999999999999999999999864 4578999999999999999742 45
Q ss_pred CeEeeccccccceEEEEEEEeCCcChHHHHHHHh
Q 003452 284 PFLFSGTKVADGYARMLATSVGMNTTWGQMMSQI 317 (819)
Q Consensus 284 ~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~ 317 (819)
|++|+||.|.+|+++++|++||.+|++|||++++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 7899999999999999999999999999999864
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.77 E-value=2e-21 Score=214.01 Aligned_cols=191 Identities=16% Similarity=0.123 Sum_probs=144.4
Q ss_pred HHHHHHHHHHHhhhCCceeeeeecccCCcccccchhhhhhhcccCcEEEEEEEeeCCCCc--cHHHHHHHHHhcCCcEEE
Q 003452 393 EKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNEKDQKKLIEDNLTLLGLVGIKDPCRP--GVKKAVEDCQYAGVNIKM 470 (819)
Q Consensus 393 ~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~~~~~~~~e~~l~~lG~v~i~D~lr~--~v~~aI~~l~~aGI~v~m 470 (819)
.+..+.+.+..++.+|+|++++|++.++..+. ....+....|++..+|++|| +++++++.|+++|+++.|
T Consensus 165 ~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~--------~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i 236 (380)
T d1qyia_ 165 TLFSLKGALWTLAQEVYQEWYLGSKLYEDVEK--------KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGI 236 (380)
T ss_dssp GGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHC--------SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhhhccccccc--------ccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEE
Confidence 34455667788999999999999987643211 11223344577788888655 999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHH---------HHHHHhhhhceeccCCHhhHHHHHHHHHh
Q 003452 471 ITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHE---------ERMEKVDKICVMARSSPFDKLLMVQCLKQ 541 (819)
Q Consensus 471 lTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~---------~~~~~~~~~~v~ar~sP~~K~~iV~~L~~ 541 (819)
+|||+..+|+.+++++||..... ...++++.+....... .--+.+....+++|++|++|..+++.++.
T Consensus 237 ~Tg~~~~~a~~il~~lgl~~~F~---~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~ 313 (380)
T d1qyia_ 237 ATGRPYTETVVPFENLGLLPYFE---ADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIV 313 (380)
T ss_dssp ECSSCHHHHHHHHHHHTCGGGSC---GGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCS
T ss_pred ECCCCHHHHHHHHHHcCCcccCC---cceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCC
Confidence 99999999999999999975321 2234444432110000 00012234457899999999999999999
Q ss_pred CCCEEEEEcCCCCCHHHhhhCC---cceeeCCCChHHHHh----hcCEEEeCCChhHHHHHH
Q 003452 542 KGHVVAVTRDGTNDAPALKETD---IGLSMGIQGTEVAKE----SSDIVILDDNFASVARVL 596 (819)
Q Consensus 542 ~g~~Va~~GDG~ND~~aL~~Ad---vGIamg~~gt~~ak~----aaDivl~dd~f~~i~~~i 596 (819)
.++.|+|||||.||++|+|+|| |||+||..|++.+++ .||+++. ++..+.+++
T Consensus 314 ~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~--~~~el~~il 373 (380)
T d1qyia_ 314 NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVIN--HLGELRGVL 373 (380)
T ss_dssp CTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEES--SGGGHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEEC--CHHHHHHHH
Confidence 9999999999999999999999 999999888876655 7999995 788887665
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.50 E-value=1.4e-14 Score=145.86 Aligned_cols=95 Identities=23% Similarity=0.354 Sum_probs=81.6
Q ss_pred CCceEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHhhhCCceeeeeecccCCcccccch----hhhhhh
Q 003452 358 DNTSHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGMASSSLRCIAFAHKQVPEEEHRNE----KDQKKL 433 (819)
Q Consensus 358 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glr~l~~a~~~~~~~~~~~~----~~~~~~ 433 (819)
++.+.+|+|||||.|+++|+.++. +|...+|+++.++.+.+.+++||++|+||||+|||+++.++.+.+ ..+.+.
T Consensus 115 ~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~ 193 (214)
T d1q3ia_ 115 PQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNF 193 (214)
T ss_dssp TTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSS
T ss_pred CCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccccChhhhhh
Confidence 356788999999999999999875 899999999999999999999999999999999999976543321 122345
Q ss_pred cccCcEEEEEEEeeCCCCcc
Q 003452 434 IEDNLTLLGLVGIKDPCRPG 453 (819)
Q Consensus 434 ~e~~l~~lG~v~i~D~lr~~ 453 (819)
.++||+|+|++||+||||++
T Consensus 194 ~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 194 PTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp CCSSEEEEEEEEEESCCSCC
T ss_pred hcCCCEEEEEEEEEeCCCCC
Confidence 68899999999999999985
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.26 E-value=6.2e-12 Score=125.91 Aligned_cols=150 Identities=19% Similarity=0.191 Sum_probs=105.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccc-c---------------------
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEE-F--------------------- 506 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~-~--------------------- 506 (819)
.+.+.+.+++++|+++|++++++||++...+..+++.+++..+....++..+..... .
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 466889999999999999999999999999999999999865311111111110000 0
Q ss_pred ------------------ccCCHHHHHHHhhhhc-----------eeccCCHhhHHHHHHHHHhC----CCEEEEEcCCC
Q 003452 507 ------------------RNYTHEERMEKVDKIC-----------VMARSSPFDKLLMVQCLKQK----GHVVAVTRDGT 553 (819)
Q Consensus 507 ------------------~~~~~~~~~~~~~~~~-----------v~ar~sP~~K~~iV~~L~~~----g~~Va~~GDG~ 553 (819)
.....+.+.+...+.. +-.......|...++.+.++ .+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 0001122233222211 11122345777777776554 45689999999
Q ss_pred CCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHHH
Q 003452 554 NDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRWG 599 (819)
Q Consensus 554 ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~g 599 (819)
||.+||+.|++||||+ ++.+.+|++||+|+.+++..++.++++..
T Consensus 179 NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred cHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 9999999999999999 89999999999999999999998887653
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.15 E-value=5.9e-11 Score=119.23 Aligned_cols=150 Identities=15% Similarity=0.207 Sum_probs=104.1
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccc-c-ccCCH--------------
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEE-F-RNYTH-------------- 511 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~-~-~~~~~-------------- 511 (819)
..+.+++.+++++|++.|++++++||++...+..++...|+..+....++..+.+... . ..+..
T Consensus 19 ~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (225)
T d1l6ra_ 19 RLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRT 98 (225)
T ss_dssp SCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHhc
Confidence 3466889999999999999999999999999999999999865411111111111100 0 00000
Q ss_pred ------------------------HHHHHHhhh--hcee-----cc--CCHhhHHHHHHHHHhC----CCEEEEEcCCCC
Q 003452 512 ------------------------EERMEKVDK--ICVM-----AR--SSPFDKLLMVQCLKQK----GHVVAVTRDGTN 554 (819)
Q Consensus 512 ------------------------~~~~~~~~~--~~v~-----ar--~sP~~K~~iV~~L~~~----g~~Va~~GDG~N 554 (819)
+.+...... ..++ .. ....+|...++.+.++ .+.|+++|||.|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~n 178 (225)
T d1l6ra_ 99 SMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNN 178 (225)
T ss_dssp SCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred CcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCcc
Confidence 111111111 0111 11 2234788888877654 345888899999
Q ss_pred CHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 555 DAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 555 D~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
|.+|++.|++||||+ ++.+.+|+.||+|...++..+|.++++.
T Consensus 179 D~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 179 DMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred hHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 999999999999999 8999999999999999999999988863
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.00 E-value=1.7e-10 Score=117.36 Aligned_cols=85 Identities=24% Similarity=0.401 Sum_probs=70.9
Q ss_pred eEEEecchHHHHHHhhhhcccccCCcccCCHHHHHHHHHHHHHh--hhCCceeeeeecccCCcccccch---hhhhhhcc
Q 003452 361 SHVHWKGAAEMILAMCSSYYDASGNIKYLDDNEKERFQQIIQGM--ASSSLRCIAFAHKQVPEEEHRNE---KDQKKLIE 435 (819)
Q Consensus 361 ~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~--a~~glr~l~~a~~~~~~~~~~~~---~~~~~~~e 435 (819)
+.+|+|||||.||++|+.++. +|...|++++.++.+.+.++.+ |++|+||||+|||+++.+..... ......+|
T Consensus 150 ~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E 228 (239)
T d1wpga3 150 NKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYE 228 (239)
T ss_dssp SEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHT
T ss_pred eEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEEECCcccccccccchhhHHHhc
Confidence 578999999999999998876 6778899999999999999875 78999999999999976543211 12345678
Q ss_pred cCcEEEEEEEe
Q 003452 436 DNLTLLGLVGI 446 (819)
Q Consensus 436 ~~l~~lG~v~i 446 (819)
+||+|+|++||
T Consensus 229 ~~L~flGlvgi 239 (239)
T d1wpga3 229 TDLTFVGVVGM 239 (239)
T ss_dssp CSEEEEEEEEE
T ss_pred CCCEEEEEECC
Confidence 99999999986
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.97 E-value=1.9e-10 Score=115.19 Aligned_cols=129 Identities=19% Similarity=0.176 Sum_probs=93.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccc-eecccccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGA-VLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~-vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
+++|++.+.++.||+.|++++++||.....+..+++.+|+...+...+.-. ..+|...... ......
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~------------~~~p~~ 149 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFD------------ETQPTA 149 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEEC------------TTSGGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccce------------eeeeee
Confidence 478999999999999999999999999999999999999974210000000 0111110000 001124
Q ss_pred CHhhHHHHHHHHHhC--CCEEEEEcCCCCCHHHhhhCCcceeeCCC-ChHHHHhhcCEEEeCCChhH
Q 003452 528 SPFDKLLMVQCLKQK--GHVVAVTRDGTNDAPALKETDIGLSMGIQ-GTEVAKESSDIVILDDNFAS 591 (819)
Q Consensus 528 sP~~K~~iV~~L~~~--g~~Va~~GDG~ND~~aL~~AdvGIamg~~-gt~~ak~aaDivl~dd~f~~ 591 (819)
.+..|..+++.++++ -+.+.++|||.||.+|++.||+++|++.+ ..+..++.+|.++. +|..
T Consensus 150 ~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~e 214 (217)
T d1nnla_ 150 ESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVE 214 (217)
T ss_dssp STTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGG
T ss_pred ccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeC--CHHH
Confidence 467899999999765 24689999999999999999999999843 45677788999885 5654
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.96 E-value=5.6e-10 Score=115.55 Aligned_cols=66 Identities=26% Similarity=0.325 Sum_probs=58.9
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
+|...++.+.+. .+.|+++|||.||.+||+.|+.|+||+ ++++.+|+.||++...++-.++.++++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 799988888765 246899999999999999999999999 999999999999998888888888775
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.96 E-value=7.6e-10 Score=106.92 Aligned_cols=108 Identities=14% Similarity=0.192 Sum_probs=87.0
Q ss_pred HHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCCHhhHHHH
Q 003452 456 KAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSSPFDKLLM 535 (819)
Q Consensus 456 ~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~i 535 (819)
.+|+.+++.|+.+.++||+....+...++++++.. ++... .+|...
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------~~~~~--~~K~~~ 84 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------FFLGK--LEKETA 84 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE--------------------------------EEESC--SCHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc--------------------------------ccccc--ccHHHH
Confidence 48999999999999999999999999999999864 23333 245555
Q ss_pred HHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCC----hhHHHHHHHH
Q 003452 536 VQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDN----FASVARVLRW 598 (819)
Q Consensus 536 V~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~----f~~i~~~i~~ 598 (819)
++.+.++ .+.|+++|||.||.|||+.|++|+||+ ++.+.+|+.||+|+..+. +..+.+.+..
T Consensus 85 l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il~ 154 (177)
T d1k1ea_ 85 CFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQ 154 (177)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCchHHHHHHHHHH
Confidence 5544332 478999999999999999999999999 999999999999998765 4444444443
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.94 E-value=4.2e-10 Score=115.74 Aligned_cols=66 Identities=18% Similarity=0.208 Sum_probs=58.2
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
+|...++.+.+. ...++++|||.||.+||+.|+.|++|+ ++.+..|+.||+|..+++=.++.++++
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCcChHHHHHH
Confidence 698888888765 345888999999999999999999999 999999999999998887788888775
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.93 E-value=5.2e-10 Score=111.81 Aligned_cols=146 Identities=11% Similarity=0.046 Sum_probs=105.0
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
+++|++.+.++.|++.|+++.++|+-....+..+.+++|+..... ......++....... ........++..
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~--an~~~~~~~~~~~~~------~~~~~~~~~~~k 146 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIY--CNHASFDNDYIHIDW------PHSCKGTCSNQC 146 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEE--EEEEECSSSBCEEEC------TTCCCTTCCSCC
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCcccee--eeeEEEeCCcceecc------ccccccccccCC
Confidence 578999999999999999999999999999999999998754210 000111111110000 000111356778
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHH-HhhcCEEEeCCChhHHHHHHHHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVA-KESSDIVILDDNFASVARVLRWGRCVHT 604 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~a-k~aaDivl~dd~f~~i~~~i~~gR~~~~ 604 (819)
|..|..+++.++..++.|.|+||+.||.+|+++||+++|++ ...+.+ ++..+++. -++|+.|...++.-.....
T Consensus 147 ~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~~-~~d~~~i~~~l~~~~~~~~ 221 (226)
T d2feaa1 147 GCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLP-YQDFYEIRKEIENVKEVQE 221 (226)
T ss_dssp SSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEEC-CSSHHHHHHHHHTSHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCeee-cCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 444444 44455443 4589999888776444433
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.92 E-value=3.6e-10 Score=116.18 Aligned_cols=66 Identities=24% Similarity=0.285 Sum_probs=58.5
Q ss_pred hHHHHHHHHHhC-C---CEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK-G---HVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~-g---~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
+|...++.|.++ | +.|.++|||.||.+||+.|+.|+||+ ++.+..|+.||+|+.+++-.++.++++
T Consensus 190 sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 190 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred HHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 699888888665 3 45888899999999999999999999 999999999999998888888887776
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.84 E-value=2e-09 Score=110.92 Aligned_cols=66 Identities=24% Similarity=0.297 Sum_probs=53.4
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCC-ChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDD-NFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd-~f~~i~~~i~ 597 (819)
.|...++.+.+. .+.|+++|||.||.+||+.||+|++|+ ++.+.+|+.||+++..+ +-..+.++++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 576666666553 357999999999999999999999999 99999999999999754 4445666554
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.74 E-value=2.2e-08 Score=97.33 Aligned_cols=130 Identities=12% Similarity=0.082 Sum_probs=96.1
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
+..++....++.+ +.+.++..+|+.............++.....+ ........ .........
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~--------------~~~~~~~~~ 130 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCH---KLEIDDSD--------------RVVGYQLRQ 130 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEE---EEEECTTS--------------CEEEEECCS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcc---eeeeeccc--------------ccccccccc
Confidence 4566777777665 57899999999999999999999988653100 00000000 011233445
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
+..+...++.++...+.|+++|||.||.+||+.||+||||+ +..++.++++|++.. +|+..+.+.+..
T Consensus 131 ~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp SSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred hhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 56677788888888899999999999999999999999997 778888899999876 478888876654
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.73 E-value=1e-08 Score=105.30 Aligned_cols=66 Identities=32% Similarity=0.407 Sum_probs=57.9
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
+|...++.+.++ ...|+++|||.||.+||+.|++|++|+ ++.+.+|+.||+++.+++-.++.++++
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 688888877654 234777899999999999999999999 999999999999999888888888775
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.73 E-value=4.1e-09 Score=107.83 Aligned_cols=66 Identities=23% Similarity=0.304 Sum_probs=58.6
Q ss_pred hHHHHHHHHHhC----CCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQK----GHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~----g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
+|...++.|.++ .+.++++|||.||.+||+.|+.|+||+ ++++.+|+.||+|..+++-.++.++++
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~ 255 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMK 255 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHH
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHH
Confidence 688888888664 356888899999999999999999999 999999999999988888888988885
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.66 E-value=1.6e-08 Score=101.42 Aligned_cols=44 Identities=14% Similarity=0.095 Sum_probs=39.5
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKP 491 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~ 491 (819)
+...+.+++++++|+++|+++.++||++...+..+.+++|+..+
T Consensus 16 ~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~ 59 (243)
T d1wzca1 16 GYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETP 59 (243)
T ss_dssp SSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCSC
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccccc
Confidence 44457789999999999999999999999999999999998754
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.65 E-value=1e-08 Score=99.98 Aligned_cols=133 Identities=13% Similarity=0.128 Sum_probs=92.7
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceecc
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 526 (819)
..++.+++.+.++.++..|..+.++||.....+....++.++.... ...+........ ......-
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~----------~~~~~~~ 137 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAF-----ANRLIVKDGKLT----------GDVEGEV 137 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEE-----EEEEEEETTEEE----------EEEECSS
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhh-----hhhhcccccccc----------ccccccc
Confidence 3478899999999999999999999999999999999998876421 011111110000 0000001
Q ss_pred CCHhhHHHHH----HHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 527 SSPFDKLLMV----QCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 527 ~sP~~K~~iV----~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
..+..|...+ +.++-..+.+.++|||.||.+|++.|++|||| ++.+..|+.||+|+..+|+..|.+++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 138 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp CSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred cccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 1122233333 33333345688899999999999999999999 47888999999999888888887654
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.44 E-value=7.5e-08 Score=96.99 Aligned_cols=144 Identities=13% Similarity=0.139 Sum_probs=93.9
Q ss_pred cHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCC--CCCccceecccccc---------cCC-----------
Q 003452 453 GVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQ--DTSTGAVLEGEEFR---------NYT----------- 510 (819)
Q Consensus 453 ~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~--~~~~~~vi~g~~~~---------~~~----------- 510 (819)
+..+++.++++.|+.+.++||++...+..+.++.++..++. ..++..+...+... ...
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF 101 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence 34456677788999999999999999999999999876421 01112222111110 000
Q ss_pred -------------------------H---HHHHHHhhhh----c--------eeccCCHhhHHHHHHHHHhC-C---CEE
Q 003452 511 -------------------------H---EERMEKVDKI----C--------VMARSSPFDKLLMVQCLKQK-G---HVV 546 (819)
Q Consensus 511 -------------------------~---~~~~~~~~~~----~--------v~ar~sP~~K~~iV~~L~~~-g---~~V 546 (819)
+ +++.+..... . +-.-....+|...++.+.+. | +.|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence 0 1111111110 0 11112344799988888765 2 457
Q ss_pred EEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcC-------EEEeCCChhHHHHHHH
Q 003452 547 AVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSD-------IVILDDNFASVARVLR 597 (819)
Q Consensus 547 a~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaD-------ivl~dd~f~~i~~~i~ 597 (819)
.++|||.||.+||+.|+.|++|+ ++.+..|+.|| ++-..++..++.++++
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~ 238 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHH
Confidence 88899999999999999999999 89999999888 4555556667777654
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.38 E-value=6e-07 Score=88.57 Aligned_cols=42 Identities=7% Similarity=-0.039 Sum_probs=38.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILK 490 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~ 490 (819)
.+.+.+.+++++|+++|+.++++||++...+..+.+++|+..
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 366789999999999999999999999999999999999863
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.73 E-value=2.5e-05 Score=76.31 Aligned_cols=61 Identities=13% Similarity=0.340 Sum_probs=44.8
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCEEEeCCChhHHHHHHH
Q 003452 531 DKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 531 ~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
+|...++.|.++.+ ++++||+.||.+||+.|+.|++|+ .|. ++.+|++.+. +...+..+++
T Consensus 159 ~Kg~al~~l~~~~~-~i~~GDs~ND~~Mf~~~~~~~av~-~g~--~~~~A~~~~~--~~~ev~~~l~ 219 (229)
T d1u02a_ 159 NKGSAIRSVRGERP-AIIAGDDATDEAAFEANDDALTIK-VGE--GETHAKFHVA--DYIEMRKILK 219 (229)
T ss_dssp CHHHHHHHHHTTSC-EEEEESSHHHHHHHHTTTTSEEEE-ESS--SCCCCSEEES--SHHHHHHHHH
T ss_pred CHHHHHHHHhcccc-ceeecCCCChHHHHhccCCeEEEE-eCC--CCccCeEEcC--CHHHHHHHHH
Confidence 79999999988755 567799999999999997776665 332 2567899886 3444544444
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.65 E-value=4.4e-05 Score=75.03 Aligned_cols=125 Identities=17% Similarity=0.159 Sum_probs=84.3
Q ss_pred CCccHHHHHHHHHhcC-CcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 450 CRPGVKKAVEDCQYAG-VNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 450 lr~~v~~aI~~l~~aG-I~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
+-||+.+.+++|++.| +++.++|+.....+..+.+..|+...- ..++.+.+... ..-.
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f-----d~i~~~~~~~~----------------~k~~ 150 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-----PFGAFADDALD----------------RNEL 150 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-----SCEECTTTCSS----------------GGGH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccc-----ccccccccccc----------------ccch
Confidence 4689999999999987 899999999999999999999997642 12222221100 0011
Q ss_pred HhhHHHHHHHHHhC---CCEEEEEcCCCCCHHHhhhCCc---ceeeCCCChH-HHHhhcCEEEeCCChhHHHHHHH
Q 003452 529 PFDKLLMVQCLKQK---GHVVAVTRDGTNDAPALKETDI---GLSMGIQGTE-VAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 529 P~~K~~iV~~L~~~---g~~Va~~GDG~ND~~aL~~Adv---GIamg~~gt~-~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
|..-...++.+... .+.+.|+||+.+|..|-+.|++ +|+.|....+ ..+..+|+++. +++.+.+++.
T Consensus 151 p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el~~~l~ 224 (228)
T d2hcfa1 151 PHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred hHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHHHHHHHH
Confidence 12112223333222 3579999999999999999994 5555533333 34456899985 8888887765
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.61 E-value=6.6e-06 Score=81.02 Aligned_cols=53 Identities=19% Similarity=0.289 Sum_probs=45.9
Q ss_pred hHHHHHHHHHhC-CCEEEEEcC----CCCCHHHhhhCC-cceeeCCCChHHHHhhcCEEE
Q 003452 531 DKLLMVQCLKQK-GHVVAVTRD----GTNDAPALKETD-IGLSMGIQGTEVAKESSDIVI 584 (819)
Q Consensus 531 ~K~~iV~~L~~~-g~~Va~~GD----G~ND~~aL~~Ad-vGIamg~~gt~~ak~aaDivl 584 (819)
+|...++.|.+. .+.|.++|| |.||.+||+.|+ .|+||+ ++.|.+|..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence 688888888764 567888999 569999999997 799999 99999999998875
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.41 E-value=9.7e-05 Score=71.79 Aligned_cols=120 Identities=15% Similarity=0.205 Sum_probs=83.5
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+... ...++.+++.. .++-.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~-----F~~i~~~~~~~----------------~~Kp~ 146 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDS-----FDALASAEKLP----------------YSKPH 146 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG-----CSEEEECTTSS----------------CCTTS
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccc-----ccccccccccc----------------cchhh
Confidence 4679999999999999999999999999999999999999653 12333333321 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCC----hHHHHhhcCEEEeCCChhHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQG----TEVAKESSDIVILDDNFASV 592 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~g----t~~ak~aaDivl~dd~f~~i 592 (819)
|+-=..+++.+.-..+.++|+||+.+|..|-+.|++.. ++... .+.....||.++. +|..+
T Consensus 147 ~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~-i~v~~~~~~~~~~~~~a~~~i~--~l~el 211 (218)
T d1te2a_ 147 PQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRS-IVVPAPEAQNDPRFVLANVKLS--SLTEL 211 (218)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEE-EECCCTTTTTCGGGGGSSEECS--CGGGC
T ss_pred HHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEE-EEECCCCCccchhhcCCCEEEC--ChhhC
Confidence 33344555555545677999999999999999999743 22222 2222346788765 55543
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.41 E-value=5.9e-05 Score=73.37 Aligned_cols=125 Identities=19% Similarity=0.264 Sum_probs=87.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
.+.|++.+.++.|++.|+++.++|+.....+..+.+++|+...- ..++...+.. .....
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f-----~~~~~~~~~~----------------~~kp~ 153 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF-----SEMLGGQSLP----------------EIKPH 153 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-----SEEECTTTSS----------------SCTTS
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhc-----cccccccccc----------------ccccc
Confidence 35799999999999999999999999999999999999987531 1122221110 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc---ceeeCCC-ChHHHHhhcCEEEeCCChhHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI---GLSMGIQ-GTEVAKESSDIVILDDNFASVARVL 596 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv---GIamg~~-gt~~ak~aaDivl~dd~f~~i~~~i 596 (819)
|+--..+.+.++-..+.++|+||..+|..+-+.|++ ++..|.+ ..+.....+|+++. ++..+.+++
T Consensus 154 p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~--~l~dL~~ii 223 (224)
T d2hsza1 154 PAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFD--DFADILKIT 223 (224)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEES--SGGGGGGGT
T ss_pred chhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEEC--CHHHHHHhh
Confidence 444445555565566789999999999999999987 3333322 22345556898876 777776554
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.33 E-value=0.0003 Score=72.06 Aligned_cols=134 Identities=14% Similarity=0.165 Sum_probs=80.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCC-Cccceecccccc-cCCHHHHHHHhhhhceecc
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDT-STGAVLEGEEFR-NYTHEERMEKVDKICVMAR 526 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~-~~~~vi~g~~~~-~~~~~~~~~~~~~~~v~ar 526 (819)
++|||+++.++.|++.|+.+.++||--...+..++++.|+..++... .+....++..+. ....+ +
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~----------~--- 201 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGE----------L--- 201 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSS----------C---
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCC----------c---
Confidence 58999999999999999999999999999999999999987542110 000111111110 00000 0
Q ss_pred CCHhhHHHHH----HHHHh--CCCEEEEEcCCCCCHHHhhh---CCcceeeCC--CCh----HHHHhhcCEEEeCCChhH
Q 003452 527 SSPFDKLLMV----QCLKQ--KGHVVAVTRDGTNDAPALKE---TDIGLSMGI--QGT----EVAKESSDIVILDDNFAS 591 (819)
Q Consensus 527 ~sP~~K~~iV----~~L~~--~g~~Va~~GDG~ND~~aL~~---AdvGIamg~--~gt----~~ak~aaDivl~dd~f~~ 591 (819)
.....|...+ ...+. ....|.++|||.||..|.+. ++.++++|- ... +.=.++-|||+.+|.--.
T Consensus 202 i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~ 281 (291)
T d2bdua1 202 IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLE 281 (291)
T ss_dssp CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCH
T ss_pred cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChh
Confidence 0112222221 22222 34578888999999999874 344554442 111 122367899999876444
Q ss_pred HHHH
Q 003452 592 VARV 595 (819)
Q Consensus 592 i~~~ 595 (819)
++..
T Consensus 282 v~~~ 285 (291)
T d2bdua1 282 VVNS 285 (291)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.26 E-value=0.00036 Score=69.58 Aligned_cols=127 Identities=16% Similarity=0.186 Sum_probs=87.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.++++.|++.|+++.++||.+...+..+-+..|+.... ...++.+.+.. ..+-.
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f----~d~~~~~d~~~----------------~~KP~ 158 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK----PDFLVTPDDVP----------------AGRPY 158 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC----CSCCBCGGGSS----------------CCTTS
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccc----ccccccccccc----------------ccccC
Confidence 57899999999999999999999999999999999999986531 11233333221 12234
Q ss_pred HhhHHHHHHHHHhC-CCEEEEEcCCCCCHHHhhhCCc---ceeeCCCC---hH---------------------HHHhhc
Q 003452 529 PFDKLLMVQCLKQK-GHVVAVTRDGTNDAPALKETDI---GLSMGIQG---TE---------------------VAKESS 580 (819)
Q Consensus 529 P~~K~~iV~~L~~~-g~~Va~~GDG~ND~~aL~~Adv---GIamg~~g---t~---------------------~ak~aa 580 (819)
|+.=....+.+.-. .+.++|+||..+|..+=+.|++ ||+-|.+. ++ ..+.-|
T Consensus 159 p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ga 238 (257)
T d1swva_ 159 PWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGA 238 (257)
T ss_dssp SHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCC
Confidence 44444555555432 4679999999999999999986 33333110 00 111238
Q ss_pred CEEEeCCChhHHHHHHH
Q 003452 581 DIVILDDNFASVARVLR 597 (819)
Q Consensus 581 Divl~dd~f~~i~~~i~ 597 (819)
|+++- ++..+..+++
T Consensus 239 d~vi~--~l~eL~~ii~ 253 (257)
T d1swva_ 239 HFTIE--TMQELESVME 253 (257)
T ss_dssp SEEES--SGGGHHHHHH
T ss_pred CEEEC--CHHHHHHHHH
Confidence 99987 7888888775
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.98 E-value=0.00029 Score=67.78 Aligned_cols=121 Identities=14% Similarity=0.070 Sum_probs=82.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.+++.+.++.++..| ++.++|+.....+..+.+..|+... ...++.+.+. ....
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~-----fd~v~~~~~~------------------~~~~ 139 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHF-----FDGIYGSSPE------------------APHK 139 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGG-----CSEEEEECSS------------------CCSH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccc-----cccccccccc------------------cccc
Confidence 56799999999999775 8999999999999999999998753 1222322221 2233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc---ceeeCCCChH-HHHhhcCEEEeCCChhHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI---GLSMGIQGTE-VAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv---GIamg~~gt~-~ak~aaDivl~dd~f~~i~~~ 595 (819)
|+-...+++.+.-..+.+.|+||+.||..|-+.|++ ++.-|....+ .....+|+++. ++..+...
T Consensus 140 p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~--~l~el~~~ 208 (210)
T d2ah5a1 140 ADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAH--KPLEVLAY 208 (210)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEES--STTHHHHH
T ss_pred ccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEEC--CHHHHHHH
Confidence 433333444443345678999999999999999997 4444433333 33445899876 67766654
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.76 E-value=0.0024 Score=62.09 Aligned_cols=125 Identities=15% Similarity=0.132 Sum_probs=83.7
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.++++.|+ +|+++.++|+........+.+.+|+...- ..++...+.. ..+-.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~f-----d~i~~s~~~~----------------~~KP~ 157 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLF-----DSITTSEEAG----------------FFKPH 157 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGC-----SEEEEHHHHT----------------BCTTS
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccc-----cccccccccc----------------ccchh
Confidence 56899999999996 58999999999999999999999986421 1222211111 12223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCC-CCCHHHhhhCCccee-e--CCCChHHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDG-TNDAPALKETDIGLS-M--GIQGTEVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG-~ND~~aL~~AdvGIa-m--g~~gt~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
|+-=..+.+.+.-....+.|+||. .+|..+-++|++-.. + + .......+.+|+++. ++..+.++++.
T Consensus 158 ~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~-~~~~~~~~~~d~~i~--~l~el~~~l~~ 228 (230)
T d1x42a1 158 PRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVS--DLREVIKIVDE 228 (230)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTT-SCCGGGGGGSSEEES--STTHHHHHHHH
T ss_pred hHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCC-CCCcccccCCCEEEC--CHHHHHHHHHH
Confidence 332233344443344569999997 589999888887432 2 2 223344567899887 78888888763
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.53 E-value=0.0034 Score=59.19 Aligned_cols=135 Identities=16% Similarity=0.158 Sum_probs=77.4
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHH---------------HHHHHHHcCCCCCCCCCCccceecccccccCCHHHH
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFT---------------AKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEER 514 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~t---------------a~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~ 514 (819)
+-|++.++++.|+++|+++.++|...... ........|+..... ..+-+..+- ..
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~cp~~p~~-~~----- 97 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGI----YYCPHHPQG-SV----- 97 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEE----EEECCBTTC-SS-----
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccce----eeccccccc-cc-----
Confidence 44899999999999999999999876311 111122223321100 000000000 00
Q ss_pred HHHhhhhceeccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcce--ee--CCCChHHHHhhcCEEEeCCChh
Q 003452 515 MEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGL--SM--GIQGTEVAKESSDIVILDDNFA 590 (819)
Q Consensus 515 ~~~~~~~~v~ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGI--am--g~~gt~~ak~aaDivl~dd~f~ 590 (819)
....+...+..-.|.-=..+.+.+.-.-+.+.||||..+|..|=+.|+++- .+ |....+.....||+++. ++.
T Consensus 98 -~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~--~l~ 174 (182)
T d2gmwa1 98 -EEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN--SLA 174 (182)
T ss_dssp -GGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES--CGG
T ss_pred -ccccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEEC--CHH
Confidence 000000012233344444555555544567899999999999999999853 22 32223556667999987 888
Q ss_pred HHHHHHH
Q 003452 591 SVARVLR 597 (819)
Q Consensus 591 ~i~~~i~ 597 (819)
.++++++
T Consensus 175 dl~~~ik 181 (182)
T d2gmwa1 175 DLPQAIK 181 (182)
T ss_dssp GHHHHHH
T ss_pred HHHHHhc
Confidence 8888876
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.35 E-value=0.001 Score=63.48 Aligned_cols=118 Identities=15% Similarity=0.164 Sum_probs=76.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.++++.|++.|+++.++|+... .+..+.+..|+... ...++...+. ....-.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~-----f~~i~~s~~~----------------~~~Kp~ 139 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESY-----FTEILTSQSG----------------FVRKPS 139 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGG-----EEEEECGGGC----------------CCCTTS
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccc-----cccccccccc----------------cccchh
Confidence 3579999999999999999999998654 45677888998752 1222222211 112234
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcce-eeCCCChHHHHhhcCEEEeCCChhHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGL-SMGIQGTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGI-amg~~gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
|+--..+++.+.-..+.++|+||+.+|..+-+.|++.. .+. .++. .+|..+. ++..+.++
T Consensus 140 ~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~~----~~~~~~~--~~~dl~~l 200 (204)
T d2go7a1 140 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-ESTY----EGNHRIQ--ALADISRI 200 (204)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCSC----TTEEECS--STTHHHHH
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEc-CCCC----CcCeecC--CHHHHHHH
Confidence 44444555555544568999999999999999999853 343 3322 2444433 55555544
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.32 E-value=0.0037 Score=60.67 Aligned_cols=118 Identities=14% Similarity=0.052 Sum_probs=79.6
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
-.+.||+.+.+++|++.|+++.++|+..........+.+|+..-.. ......++. ...+-
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~----~~~~~~d~~----------------~~~KP 185 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILE----LVDGHFDTK----------------IGHKV 185 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGG----GCSEEECGG----------------GCCTT
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhh----hcceeeccc----------------cccCC
Confidence 3568999999999999999999999999999999999999764211 000000000 11233
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceee----CCCChHHHHhhcCEEEe
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSM----GIQGTEVAKESSDIVIL 585 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIam----g~~gt~~ak~aaDivl~ 585 (819)
.|+-=....+.+.-..+.++|+||..+|+.+=++|++-... |..........++.++.
T Consensus 186 ~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 186 ESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred CcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEEC
Confidence 44444444555544456799999999999999999985544 32333344455666664
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.20 E-value=0.00061 Score=65.43 Aligned_cols=120 Identities=8% Similarity=0.147 Sum_probs=81.1
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+.+.++.|++ ++++.++|+.....+..+.+..|+... ...++.+.+.. ...-.
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~-----f~~i~~~~~~~----------------~~KP~ 139 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMR-----MAVTISADDTP----------------KRKPD 139 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGG-----EEEEECGGGSS----------------CCTTS
T ss_pred ccccchhhhhhhhcc-ccccccccccccccccccccccccccc-----ccccccccccc----------------cchhh
Confidence 356999999999974 799999999999999999999998652 12222222211 12223
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceee---CCCChHHHHhhcCEEEeCCChhHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSM---GIQGTEVAKESSDIVILDDNFASVA 593 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIam---g~~gt~~ak~aaDivl~dd~f~~i~ 593 (819)
|+--..+++.+.-..+.+.|+||..+|..+-++|++.... | .......+.+|.++. ++..|.
T Consensus 140 p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~--~l~dll 204 (207)
T d2hdoa1 140 PLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQ--KPLDIL 204 (207)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEES--SGGGGG
T ss_pred hhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeC--CHHHHH
Confidence 4444445554443346788999999999999999887543 3 333444567888874 565554
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.98 E-value=0.00099 Score=64.77 Aligned_cols=37 Identities=5% Similarity=0.002 Sum_probs=29.5
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHc
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATEC 486 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~ 486 (819)
.+-+.+.++|++|++.|+ +.++||.+...+.....+.
T Consensus 20 ~i~~~~~~al~~l~~~g~-~~i~Tgr~~~~~~~~~~~~ 56 (243)
T d2amya1 20 KITKEMDDFLQKLRQKIK-IGVVGGSDFEKVQEQLGND 56 (243)
T ss_dssp CCCHHHHHHHHHHTTTSE-EEEECSSCHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHcCCC-EEEEcCCChHHhHHHHhhh
Confidence 467889999999999886 7789999987776655443
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.79 E-value=0.0053 Score=56.69 Aligned_cols=88 Identities=9% Similarity=-0.054 Sum_probs=62.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCC-HHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDN-VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~-~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
++.|++.++++.|++.|+++.++|+-+ ...+..+-+..++..... . +....
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~-----~-----------------------~~~~~ 97 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFI-----Q-----------------------REIYP 97 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCS-----E-----------------------EEESS
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccce-----e-----------------------eeccc
Confidence 688999999999999999999999654 566676777777653210 0 12222
Q ss_pred C--HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc
Q 003452 528 S--PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI 564 (819)
Q Consensus 528 s--P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv 564 (819)
. |+.-..+.+.+.-..+.+.|+||..+|..+-+.|++
T Consensus 98 kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~ 136 (164)
T d1u7pa_ 98 GSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGV 136 (164)
T ss_dssp SCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred CCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCC
Confidence 2 333334444444445789999999999999999987
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.61 E-value=0.011 Score=55.46 Aligned_cols=109 Identities=16% Similarity=0.061 Sum_probs=72.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.||+++.++.+++.|+++.++|+-+.... .+-+..|+... ...++.+.+... ..-.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~-----fd~i~~~~~~~~----------------~KP~ 136 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAY-----FTEVVTSSSGFK----------------RKPN 136 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGG-----EEEEECGGGCCC----------------CTTS
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccc-----cccccccccccc----------------cCCC
Confidence 5779999999999999999999999776554 56778887642 122333322110 1112
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeCCCChHHHHhhcCE
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMGIQGTEVAKESSDI 582 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg~~gt~~ak~aaDi 582 (819)
|+--..+.+.+. -+.+.|+||..+|..+=++|++-...= ++.+..++.-|+
T Consensus 137 p~~~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i~v-~~~~~~~~~~d~ 187 (187)
T d2fi1a1 137 PESMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLDI 187 (187)
T ss_dssp CHHHHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHTC
T ss_pred HHHHHHHHHHcC--CCCeEEEeCCHHHHHHHHHcCCEEEEE-CCCCChHhhcCC
Confidence 333333333332 234889999999999999998875443 677777776664
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.58 E-value=0.015 Score=56.70 Aligned_cols=126 Identities=12% Similarity=0.096 Sum_probs=82.4
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
++.|++.++++.|++ |+++.++|+.+.......-+.+|+...- ..++.+.+.. .++-+
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f-----d~i~~s~~~~----------------~~KP~ 166 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF-----DAIVIGGEQK----------------EEKPA 166 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC-----SEEEEGGGSS----------------SCTTC
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccc-----cccccccccc----------------cchhh
Confidence 467999999999985 8999999999999999999999986531 1222222211 11222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCC-CCHHHhhhCCcceeeCCCCh----HHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGT-NDAPALKETDIGLSMGIQGT----EVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~AdvGIamg~~gt----~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
|+-=..+.+.+.-..+.+.|+||.. +|..+-+.|++.-....++. ......+|+++. ++..+.++++.
T Consensus 167 p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~--~l~eL~~ll~~ 239 (247)
T d2gfha1 167 PSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVS--SVLELPALLQS 239 (247)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEES--SGGGHHHHHHH
T ss_pred hhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEEC--CHHHHHHHHHH
Confidence 3222333444433345689999985 89999999999633211111 122334788887 78888888763
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.94 E-value=0.0044 Score=55.85 Aligned_cols=95 Identities=15% Similarity=0.024 Sum_probs=59.5
Q ss_pred eCCCCccHHHHHHHHHhcCCcEEEEcCCCHHHH----HHHHH-------HcCCCCCCCCCCccceecccccccCCHHHHH
Q 003452 447 KDPCRPGVKKAVEDCQYAGVNIKMITGDNVFTA----KAIAT-------ECGILKPGQDTSTGAVLEGEEFRNYTHEERM 515 (819)
Q Consensus 447 ~D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta----~~iA~-------~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~ 515 (819)
+|.+.|++.+.++.++++|+++.++||.+.... ..+.. ..++... .......
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~------~~~~~~~----------- 96 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLV------MQCQREQ----------- 96 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCS------EEEECCT-----------
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEE------Eeecccc-----------
Confidence 467899999999999999999999999863211 11110 0010000 0000000
Q ss_pred HHhhhhceeccCCHhhHHHHHHHHHhC-CCEEEEEcCCCCCHHHhhhCCcc
Q 003452 516 EKVDKICVMARSSPFDKLLMVQCLKQK-GHVVAVTRDGTNDAPALKETDIG 565 (819)
Q Consensus 516 ~~~~~~~v~ar~sP~~K~~iV~~L~~~-g~~Va~~GDG~ND~~aL~~AdvG 565 (819)
--.|..+.-|..+.+.+... .++++|+||-..|+.|.+++++-
T Consensus 97 -------~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 97 -------GDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp -------TCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred -------cccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 00122345677777776655 45678899999999999999875
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.84 E-value=0.066 Score=51.50 Aligned_cols=138 Identities=19% Similarity=0.227 Sum_probs=92.3
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccC--CH----------------
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNY--TH---------------- 511 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~--~~---------------- 511 (819)
+-||+.++++.+++. ....++|---.+-..++|+.+|+... .--+.-+++.+ ..
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e-------~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~ 153 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGE-------LHGTEVDFDSIAVPEGLREELLSIIDVIASL 153 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSE-------EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHC
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCce-------eecccccccccCCChHHHHHHHHHhhhccCc
Confidence 459999999999887 78888888899999999999999631 11111112111 11
Q ss_pred --HHHH-------------HHhhhhceeccCCHhhHHHHHHHHHhC-C-CEEEEEcCCCCCHHHhhhCCc--ceeeCCCC
Q 003452 512 --EERM-------------EKVDKICVMARSSPFDKLLMVQCLKQK-G-HVVAVTRDGTNDAPALKETDI--GLSMGIQG 572 (819)
Q Consensus 512 --~~~~-------------~~~~~~~v~ar~sP~~K~~iV~~L~~~-g-~~Va~~GDG~ND~~aL~~Adv--GIamg~~g 572 (819)
+++. +++++++... -..|..+++..-+. + ...+++||++.|..+|+.|.= |+|+.-+|
T Consensus 154 ~~eel~e~~d~~f~~~e~~~i~e~Vk~VG---gg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNG 230 (308)
T d1y8aa1 154 SGEELFRKLDELFSRSEVRKIVESVKAVG---AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNG 230 (308)
T ss_dssp CHHHHHHHHHHHHHSHHHHHHHHTCBCCC---HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESC
T ss_pred cHHHHHHHHHHHhccchHhhHHhhhcccC---CchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecC
Confidence 1111 1222222221 14566666544322 2 234788999999999998743 77777689
Q ss_pred hHHHHhhcCEEEeCCChhHHHHHHHH
Q 003452 573 TEVAKESSDIVILDDNFASVARVLRW 598 (819)
Q Consensus 573 t~~ak~aaDivl~dd~f~~i~~~i~~ 598 (819)
.+-|...||+.+...+-..+..++..
T Consensus 231 N~Yal~eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 231 NEYALKHADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp CHHHHTTCSEEEECSSTHHHHHHHHH
T ss_pred ccccccccceEEeccchhHHHHHHHH
Confidence 99999999999998887777766654
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=94.43 E-value=0.02 Score=56.38 Aligned_cols=34 Identities=21% Similarity=0.292 Sum_probs=28.4
Q ss_pred ccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHH
Q 003452 452 PGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATE 485 (819)
Q Consensus 452 ~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~ 485 (819)
|++.++|+.|+++|++++++|+....+...++++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~ 54 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQR 54 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence 7899999999999999999998776666666554
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=94.01 E-value=0.03 Score=53.19 Aligned_cols=124 Identities=10% Similarity=0.085 Sum_probs=83.0
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
.+.+++.++++.+++.|+++.++|+-.........+..|+...- ..++...+.. ..+-.
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f-----d~~~~s~~~~----------------~~KP~ 151 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF-----DHLLSVDPVQ----------------VYKPD 151 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC-----SEEEESGGGT----------------CCTTS
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccc-----cceeeeeeee----------------ccccH
Confidence 45689999999999999999999999999999998888876531 2222222211 12233
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcceeeC---CCChHHHHhhcCEEEeCCChhHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGLSMG---IQGTEVAKESSDIVILDDNFASVARV 595 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGIamg---~~gt~~ak~aaDivl~dd~f~~i~~~ 595 (819)
|+-=..+.+.+.-.-+.++|+||..+|+.+=++|++--..- ....+.....+|.++. ++..+.++
T Consensus 152 p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~--~l~el~~l 219 (220)
T d1zrna_ 152 NRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVT--SLRAVVEL 219 (220)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEES--SHHHHHTT
T ss_pred HHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEEC--CHHHHHhh
Confidence 33333444444444467999999999999999999764432 1222223345788885 67776653
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=93.64 E-value=0.013 Score=56.08 Aligned_cols=91 Identities=16% Similarity=0.238 Sum_probs=63.7
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCC----HHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceec
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDN----VFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA 525 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~----~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a 525 (819)
+.|++.+.++.+++.|++|..+||+. ..|++++-+.+|+...+. ..+.+.+.+
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~---~~vll~~~~-------------------- 143 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNM---NPVIFAGDK-------------------- 143 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTB---CCCEECCCC--------------------
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccc---cceEeeCCC--------------------
Confidence 45799999999999999999999974 567777778899875421 112222111
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc-ceee
Q 003452 526 RSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI-GLSM 568 (819)
Q Consensus 526 r~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv-GIam 568 (819)
...+.|.+.++ + -++++++||..+|..+-++|++ +|.+
T Consensus 144 -~~K~~rr~~Ik---~-y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 144 -PGQNTKSQWLQ---D-KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp -TTCCCSHHHHH---H-TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred -CCchHHHHHHH---H-cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 11234555554 3 3689999999999999999986 4443
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=93.30 E-value=0.17 Score=49.49 Aligned_cols=62 Identities=16% Similarity=0.162 Sum_probs=41.0
Q ss_pred HHHHHHHHhCCCEEEEEcCCC-CCHHHhhhCCc-ceeeC--CCChHHHHhh---cCEEEeCCChhHHHHHH
Q 003452 533 LLMVQCLKQKGHVVAVTRDGT-NDAPALKETDI-GLSMG--IQGTEVAKES---SDIVILDDNFASVARVL 596 (819)
Q Consensus 533 ~~iV~~L~~~g~~Va~~GDG~-ND~~aL~~Adv-GIamg--~~gt~~ak~a---aDivl~dd~f~~i~~~i 596 (819)
..+.+.+.-.-+.++|+||.. ||..+-++|++ ++.+. ....+....+ .|+++. ++..+.+++
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~--~l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFK--NLGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEES--SHHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEEC--CHHHHHHHh
Confidence 444455544457899999996 69999999997 55543 2222222222 488887 888888776
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=93.09 E-value=0.027 Score=53.70 Aligned_cols=112 Identities=10% Similarity=0.134 Sum_probs=70.8
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
.++-||+.+.++.|++.|+++.++|+... +....+..|+.... ..++.+.+.. ..+-
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f-----~~i~~~~~~~----------------~~KP 146 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYF-----DAIADPAEVA----------------ASKP 146 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGC-----SEECCTTTSS----------------SCTT
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccc-----cccccccccc----------------cccc
Confidence 45779999999999999999999999764 46677888886531 2223332211 1222
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc-ceeeCCCChHHHHhhcCEEEe
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI-GLSMGIQGTEVAKESSDIVIL 585 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv-GIamg~~gt~~ak~aaDivl~ 585 (819)
.|+-=....+.+.-..+.+.|+||..+|..+-+.|++ .|+++ .+ .....++.++.
T Consensus 147 ~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~-~~--~~~~~~~~~~~ 202 (221)
T d1o08a_ 147 APDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVG-RP--EDLGDDIVIVP 202 (221)
T ss_dssp STHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEES-CH--HHHCSSSEEES
T ss_pred ChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEEC-Ch--hhcccccEEcC
Confidence 2322223333333334668999999999999999987 34444 22 22334555554
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=91.96 E-value=0.08 Score=49.99 Aligned_cols=100 Identities=12% Similarity=0.122 Sum_probs=65.3
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCC----CHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhcee
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGD----NVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVM 524 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD----~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 524 (819)
.++|++.+.++.|+++|+++.++|+- ............|+... ...++.+.+. -.
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~-----fd~i~~s~~~----------------~~ 155 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQH-----FDFLIESCQV----------------GM 155 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGG-----CSEEEEHHHH----------------SC
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhh-----hceeeehhhc----------------cC
Confidence 36789999999999999999999962 33344444555555431 1122222111 12
Q ss_pred ccCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc-ceeeC
Q 003452 525 ARSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI-GLSMG 569 (819)
Q Consensus 525 ar~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv-GIamg 569 (819)
..-.|+--....+.++-.-+.+.|+||..+|..+-+.|++ +|-+.
T Consensus 156 ~KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~ 201 (222)
T d1cr6a1 156 IKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVH 201 (222)
T ss_dssp CTTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECC
T ss_pred CCCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEEC
Confidence 2345555566666666566678999999999999999987 44443
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=91.82 E-value=0.15 Score=48.24 Aligned_cols=125 Identities=11% Similarity=0.121 Sum_probs=78.6
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccCC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARSS 528 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 528 (819)
.+.|++.+.+++++ .+..++|+-....+..+-+.+|+..... ..+..+.+... -.++-.
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~--------------~~~KP~ 143 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFA----PHIYSAKDLGA--------------DRVKPK 143 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTT----TCEEEHHHHCT--------------TCCTTS
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccc----eeecccccccc--------------cccccC
Confidence 56788888887765 4567899999999999999999976421 11222211100 012222
Q ss_pred HhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcc-eeeCCCCh-------H-HHHhhcCEEEeCCChhHHHHHHH
Q 003452 529 PFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIG-LSMGIQGT-------E-VAKESSDIVILDDNFASVARVLR 597 (819)
Q Consensus 529 P~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvG-Iamg~~gt-------~-~ak~aaDivl~dd~f~~i~~~i~ 597 (819)
|+-=....+.+.-..+.+.|+||..+|..+=+.|++- |++. .+. + ....-+|+++. ++..+..++.
T Consensus 144 ~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~--~l~eL~~ll~ 218 (222)
T d2fdra1 144 PDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVIS--RMQDLPAVIA 218 (222)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEES--CGGGHHHHHH
T ss_pred HHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEc-cCCCCCcchHHHHHhCCCCEEEC--CHHHHHHHHH
Confidence 3333344444444456799999999999999999973 3332 221 1 22334899997 7777776654
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=90.43 E-value=0.14 Score=48.92 Aligned_cols=25 Identities=24% Similarity=0.428 Sum_probs=22.9
Q ss_pred CCCccHHHHHHHHHhcCCcEEEEcC
Q 003452 449 PCRPGVKKAVEDCQYAGVNIKMITG 473 (819)
Q Consensus 449 ~lr~~v~~aI~~l~~aGI~v~mlTG 473 (819)
.+-|++.+++++|+++|+++.++|.
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred EecccHHHHHHHHHhhCCeEEEecc
Confidence 3579999999999999999999995
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=90.43 E-value=0.48 Score=44.92 Aligned_cols=125 Identities=14% Similarity=0.177 Sum_probs=80.0
Q ss_pred CCCCccHHHHHHHHHhcCCcEEEEcCCCHHHHHHHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceeccC
Q 003452 448 DPCRPGVKKAVEDCQYAGVNIKMITGDNVFTAKAIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMARS 527 (819)
Q Consensus 448 D~lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 527 (819)
.++.|++.+++++|+ |+.+.++|..+...+...-+..|+... ...++.+.+... .+-
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~-----fd~v~~s~~~~~----------------~KP 148 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS-----FDAVISVDAKRV----------------FKP 148 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG-----CSEEEEGGGGTC----------------CTT
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccc-----cccccccccccc----------------cCc
Confidence 356789999999885 788999999999999998888888653 223333333221 122
Q ss_pred CHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCcce-eeCCCChH-------------------------HHHhhcC
Q 003452 528 SPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDIGL-SMGIQGTE-------------------------VAKESSD 581 (819)
Q Consensus 528 sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~AdvGI-amg~~gt~-------------------------~ak~aaD 581 (819)
.|+-=...++.+.-.-+.+.|+||..+|..+=++|++-- .+...+.+ ......|
T Consensus 149 ~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd 228 (245)
T d1qq5a_ 149 HPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPD 228 (245)
T ss_dssp SHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCS
T ss_pred cHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCC
Confidence 232223334444333456999999999999988888632 22101111 0012378
Q ss_pred EEEeCCChhHHHHHHH
Q 003452 582 IVILDDNFASVARVLR 597 (819)
Q Consensus 582 ivl~dd~f~~i~~~i~ 597 (819)
+++. ++..++.+++
T Consensus 229 ~~i~--~l~el~~lv~ 242 (245)
T d1qq5a_ 229 FVVP--ALGDLPRLVR 242 (245)
T ss_dssp EEES--SGGGHHHHHH
T ss_pred EEEC--CHHHHHHHHH
Confidence 9986 8999998876
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=90.29 E-value=0.24 Score=48.14 Aligned_cols=40 Identities=15% Similarity=0.208 Sum_probs=30.7
Q ss_pred ccHHHHHHHHHhcCCcEEEEcCC---CHHHHHHHHHHcCCCCC
Q 003452 452 PGVKKAVEDCQYAGVNIKMITGD---NVFTAKAIATECGILKP 491 (819)
Q Consensus 452 ~~v~~aI~~l~~aGI~v~mlTGD---~~~ta~~iA~~~GI~~~ 491 (819)
|++.++|+.|+++|++++.+|+. ........-+++|+..+
T Consensus 22 ~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~ 64 (250)
T d2c4na1 22 PGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP 64 (250)
T ss_dssp TTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCC
T ss_pred ccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccccc
Confidence 78999999999999999999854 44555444556787643
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=89.03 E-value=0.46 Score=46.02 Aligned_cols=59 Identities=22% Similarity=0.164 Sum_probs=38.2
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCCC-CHHHhhhCCc-ceeeCCCC---hHHHHhh---cCEEEe
Q 003452 526 RSSPFDKLLMVQCLKQKGHVVAVTRDGTN-DAPALKETDI-GLSMGIQG---TEVAKES---SDIVIL 585 (819)
Q Consensus 526 r~sP~~K~~iV~~L~~~g~~Va~~GDG~N-D~~aL~~Adv-GIamg~~g---t~~ak~a---aDivl~ 585 (819)
.-+|+--..+.+.+.-..+.++|+||..+ |..+-++|++ +|.+. +| .+...+. .|+++.
T Consensus 180 KP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~-~G~~~~~~~~~~~~~PD~vi~ 246 (253)
T d1wvia_ 180 KPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVT-TGFTKPEEVPALPIQPDFVLS 246 (253)
T ss_dssp TTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEES-SSSSCTTTGGGCSSCCSEEES
T ss_pred cCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEEC-CCCCCHHHHhhcCCCCCEEEC
Confidence 33454445556666555678999999976 9999999998 66654 22 2222222 388875
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.99 E-value=0.15 Score=47.65 Aligned_cols=99 Identities=11% Similarity=0.092 Sum_probs=59.1
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCCCHHHHH----HHHHHcCCCCCCCCCCccceecccccccCCHHHHHHHhhhhceec
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGDNVFTAK----AIATECGILKPGQDTSTGAVLEGEEFRNYTHEERMEKVDKICVMA 525 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD~~~ta~----~iA~~~GI~~~~~~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a 525 (819)
+.|++.+.++.|++.|+++.++|+....... ..-...|+... ...++.+.+.. ..
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~-----fd~i~~s~~~~----------------~~ 158 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH-----FDFLIESCQVG----------------MV 158 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT-----SSEEEEHHHHT----------------CC
T ss_pred CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhh-----ccEEEeccccc----------------cc
Confidence 5789999999999999999999975433222 12222233221 01122211110 12
Q ss_pred cCCHhhHHHHHHHHHhCCCEEEEEcCCCCCHHHhhhCCc-ceeeC
Q 003452 526 RSSPFDKLLMVQCLKQKGHVVAVTRDGTNDAPALKETDI-GLSMG 569 (819)
Q Consensus 526 r~sP~~K~~iV~~L~~~g~~Va~~GDG~ND~~aL~~Adv-GIamg 569 (819)
.-.|+-=..+++.+.-..+.++|+||...|..+-++|++ +|.+.
T Consensus 159 KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 159 KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred hhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 223333344455554444568899999999999999998 55554
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=82.42 E-value=0.17 Score=46.01 Aligned_cols=25 Identities=36% Similarity=0.465 Sum_probs=22.9
Q ss_pred CCccHHHHHHHHHhcCCcEEEEcCC
Q 003452 450 CRPGVKKAVEDCQYAGVNIKMITGD 474 (819)
Q Consensus 450 lr~~v~~aI~~l~~aGI~v~mlTGD 474 (819)
+-|++.++++.|++.|+++.++|..
T Consensus 31 ~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 31 FEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred ECccHHHHHHHHHHcCCceeeeccc
Confidence 4689999999999999999999974
|