Citrus Sinensis ID: 003458

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------82
MRKWTIPSILLLLFLVALIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDSSDEEEKAEKEEETEKSESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISPDAAVEEEDDVEETDADTEMKESSAAKEDVDTEYSGKDEL
cccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccHHHHHHHHccccccccccccccccEEEEEEEcccccEEEEEEccccccHHHHHHccccccccHHHHHHHHHHcccccccccccccccccEEEEccEEEEEEcccccccEEEEEcccccEEEEEcccccccccccEEEEEEcccHHccccHHHHHHHHHHHcccccccEEEEEEEEEEcccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccEEEEcccccccccccccccHHHHHHHHHccccccccccccEEEEEEccccEEEEEEEEcccccccccHHHcccccccccEEEEEEEEEcccccHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHcccccccccEEEcHHHHHHHcccccccEEEEEcccHHHHHHcHHHHHHHHcccEEEEccccHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccEEEEEccccccHHHHHHHHHcccccccHHHHcccccEEEEccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccc
ccccHHHHHHHHHHHHHHccccccEEEEcccccccccccccccHHHcccccccccccHHHHHHHHHHHHccccccHcEEEEccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHcccccccccEEEEEEHHHcEEEEEEccccccHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHccHHHHHHHcEEEEEEEEEccccccEEEEEccccEEEEEEcccccccccEEEEEEEEccccHHHHcHHHHHHHHHHHcccccccEEEEEEEEccccccccHHHHHHHHHHHccccccccccccccHHHHHHccccccEEEEEEEEcHHHHcccccEEccccHHccHHHHHHHHHHHHccHHcccccEEEEEEEccEEEEEEEEEccccccccccccccccccccEEEEEEEEEEEccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccccHHHHHHHcHcccccEEEEEcccHHHHHccHHHHHHHHcccEEEEEEccHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccEEEEEccccccHHHHHHHHHHHHHcccHHHHHHHccEEEEccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccHcHcccccccccccccc
MRKWTIPSILLLLFLVALIpdqgrniqakaedesdklvdppkveeklgavpnglstdsDVAKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLtdkevlgegdntkLEIQIKLDKEKKILSIrdrgigmtKEDLIKNLGTIAKSGTSAFVEKMQtsgdlnligqfgvGFYSVYLVADYVEVISkhnddkqyvweskadgafaisedtwneplgrgtEIRLHLRDEAGEYLEESKLKELVKKYSEFInfpiyiwaskevdvdvptdeddssdeeEKAEKEeeteksesesedededsekkpktktvKETTFEWELLNDVKAIwlrnpkevtEEEYAKFYHSLVkdfsdekplawshfnaegdvefkavlfvppkaphdlyesYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKglvdsdtlplnVSREMLQQHSSLKTIKKKLIRKALDMIRKIAeedpdestgkdkkdvekfsddddkkgqYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFestksdgkltSLDQYISRMKAGQKDIFYITgankeqlekspflerlkkknyevifftDPVDEYLMQYLMDYEDKKFQNVSKeglklgkdtkDKELKESFKELTKWWKGAlasenvddvkvsnrldntpcvVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKrvleinprhpiIKELRERvvkdpedagvQQTAQLIYQTALMesgfslndpkdFASRIYSTVKsslnispdaaveeeddveetdadtemkessaakedvdteysgkdel
MRKWTIPSILLLLFLVALIPDQGRNIQAKaedesdklvdppkveeklgavpnglstdsdvaKREAEsiskrslrnnaekfEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLtdkevlgegdntkleiqikldkekkilsirdrgigmtkeDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGafaisedtwneplgrgTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPtdeddssdeeekaekeeeteksesesedededsekkpktktvkettfewellndvkaiWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMlqqhsslktikkKLIRKALDMIRKiaeedpdestgkdkkdvekfsddddkkgqyTKFWNEFGKSIKLGIIEDAANRNRLAKLlrfestksdgkltsLDQYISRMKAGQKDIFYITgankeqlekspflerlkkknyeviFFTDPVDEYLMQYLMDYEDKKFQNVSKeglklgkdtkdkeLKESFKELTKwwkgalasenvddvkvsnrldntpcVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKrvleinprhpiiKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVksslnispdaaveeeddveetdadtemkessaakedvdteysgkdel
MRKWTIPSIllllflvalIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDEAGeyleesklkelvkkyseFINFPIYIWASkevdvdvptdeddssdeeekaekeeeteksesesedededsekkpktktvkettfeweLLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISPdaaveeeddveetdadteMKESSAAKEDVDTEYSGKDEL
***WTIPSILLLLFLVALIPD**********************************************************FEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVD************************************************TTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVS***********TIKKKLIRKALDMI*******************************YTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFE*******LTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQ*********************FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERI******************RVLEINPRHPIIKELRERVV*******VQQTAQLIYQTALMESGFSL********RIY**************************************************
**KWTIPSILLLLFLVALIPDQGRNIQAK****************************************************FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF***********LIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWAS***************************************************ETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIA*************************GQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVS********************ELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANME**********************LEINPRHPIIKELRER******DAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLN******************************************
MRKWTIPSILLLLFLVALIPDQGRNIQA**********DPPKVEEKLGAVPNGLST*************KRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDV********************************************VKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAE*********************DKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISPD**************************************
*RKWTIPSILLLLFLVALIPDQGRNIQAKAE*******DPPK*******************************RNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVD***************************************KPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEED***************SDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNI*****************************************
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SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRKWTIPSILLLLFLVALIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDSxxxxxxxxxxxxxxxxxxxxxxxxxxSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISPDAAVEEEDDVEETDADTEMKESSAAKEDVDTEYSGKDEL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query818 2.2.26 [Sep-21-2011]
P35016817 Endoplasmin homolog OS=Ca N/A no 0.998 1.0 0.837 0.0
Q9STX5823 Endoplasmin homolog OS=Ar yes no 0.947 0.941 0.825 0.0
P36183809 Endoplasmin homolog OS=Ho N/A no 0.946 0.956 0.805 0.0
Q66HD0804 Endoplasmin OS=Rattus nor yes no 0.896 0.911 0.494 0.0
Q95M18804 Endoplasmin OS=Bos taurus yes no 0.894 0.910 0.498 0.0
P08113802 Endoplasmin OS=Mus muscul yes no 0.896 0.913 0.491 0.0
P41148804 Endoplasmin OS=Canis fami yes no 0.894 0.910 0.498 0.0
P08110795 Endoplasmin OS=Gallus gal yes no 0.861 0.886 0.505 0.0
Q29092804 Endoplasmin OS=Sus scrofa yes no 0.894 0.910 0.498 0.0
Q4R520804 Endoplasmin OS=Macaca fas N/A no 0.894 0.910 0.496 0.0
>sp|P35016|ENPL_CATRO Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1 Back     alignment and function desciption
 Score = 1305 bits (3378), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 685/818 (83%), Positives = 745/818 (91%), Gaps = 1/818 (0%)

Query: 1   MRKWTIPSILLLLFLVALIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDV 60
           MRKWT+PS+L LL        QGR I A AE +SD  VDPPKVE+K+GAVPNGLSTDSDV
Sbjct: 1   MRKWTVPSVLFLLCPSLSSSCQGRKIHANAEADSDAPVDPPKVEDKIGAVPNGLSTDSDV 60

Query: 61  AKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR 120
           AKREAES+S R+LR++AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR
Sbjct: 61  AKREAESMSMRNLRSDAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR 120

Query: 121 FLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF 180
           FL+LTDKE+LGEGD  KLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF
Sbjct: 121 FLALTDKEILGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF 180

Query: 181 VEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWN 240
           VEKMQTSGDLNLIGQFGVGFYSVYLV DYVEVISKHNDDKQY+WESKADGAFAISED WN
Sbjct: 181 VEKMQTSGDLNLIGQFGVGFYSVYLVPDYVEVISKHNDDKQYIWESKADGAFAISEDVWN 240

Query: 241 EPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDS 300
           EPLGRGTEIRLHLRDEA EYL+E KLKELVK+YSEFINFPIY+WASKEV+V+VP +EDDS
Sbjct: 241 EPLGRGTEIRLHLRDEAQEYLDEFKLKELVKRYSEFINFPIYLWASKEVEVEVPAEEDDS 300

Query: 301 SDEEEKAEKEEETEKSESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEV 360
           SD+E+   +   +E+ E E  +++ED +K  KTK VKETT+EWELLND+KAIWLRNPK+V
Sbjct: 301 SDDEDNKSESSSSEEGEEEETEKEEDEKKP-KTKKVKETTYEWELLNDMKAIWLRNPKDV 359

Query: 361 TEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKAN 420
           T++EY KFYHSL KDFS+EKPLAWSHF AEGDVEFKA   +PPKAP DLYESYYN+NK+N
Sbjct: 360 TDDEYTKFYHSLAKDFSEEKPLAWSHFTAEGDVEFKAFTLLPPKAPQDLYESYYNSNKSN 419

Query: 421 LKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA 480
           LKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA
Sbjct: 420 LKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA 479

Query: 481 LDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNR 540
           LDMIRKIA+EDPDE+  KDKK+VE+ +D+D+KKGQY KFWNEFGKSIKLGIIEDAANRNR
Sbjct: 480 LDMIRKIADEDPDEANDKDKKEVEESTDNDEKKGQYAKFWNEFGKSIKLGIIEDAANRNR 539

Query: 541 LAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEV 600
           LAKLLRFESTKS+GKLTSLDQYISRMK+GQKDIFYITG +KEQLEKSPFLERL KKNYEV
Sbjct: 540 LAKLLRFESTKSEGKLTSLDQYISRMKSGQKDIFYITGTSKEQLEKSPFLERLTKKNYEV 599

Query: 601 IFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASE 660
           I FTDPVDEYLMQYLMDYEDKKFQNVSKEGLK+GKD+KDKELKESFKELTKWWKGALASE
Sbjct: 600 ILFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKIGKDSKDKELKESFKELTKWWKGALASE 659

Query: 661 NVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHP 720
           NVDDVK+SNRL NTPCVVVTSKYGWS+NMERIMQSQTLSDASKQAYMRGKRVLEINPRHP
Sbjct: 660 NVDDVKISNRLANTPCVVVTSKYGWSSNMERIMQSQTLSDASKQAYMRGKRVLEINPRHP 719

Query: 721 IIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISPD 780
           IIKELRERVVKD ED  V+QTA+L+YQTALMESGF LNDPK+FAS IY +VKSSL ISPD
Sbjct: 720 IIKELRERVVKDAEDESVKQTARLMYQTALMESGFMLNDPKEFASSIYDSVKSSLKISPD 779

Query: 781 AAVEEEDDVEETDADTEMKESSAAKEDVDTEYSGKDEL 818
           A VEEEDD EE +A++   ESSAA++        KDEL
Sbjct: 780 ATVEEEDDTEEAEAESGTTESSAAEDAGAETLDLKDEL 817
May have a molecular chaperone role in the processing of secreted materials.
Catharanthus roseus (taxid: 4058)
>sp|Q9STX5|ENPL_ARATH Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1 Back     alignment and function description
>sp|P36183|ENPL_HORVU Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1 Back     alignment and function description
>sp|Q66HD0|ENPL_RAT Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2 Back     alignment and function description
>sp|Q95M18|ENPL_BOVIN Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1 Back     alignment and function description
>sp|P08113|ENPL_MOUSE Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2 Back     alignment and function description
>sp|P41148|ENPL_CANFA Endoplasmin OS=Canis familiaris GN=HSP90B1 PE=1 SV=1 Back     alignment and function description
>sp|P08110|ENPL_CHICK Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1 Back     alignment and function description
>sp|Q29092|ENPL_PIG Endoplasmin OS=Sus scrofa GN=HSP90B1 PE=2 SV=3 Back     alignment and function description
>sp|Q4R520|ENPL_MACFA Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query818
224085900823 predicted protein [Populus trichocarpa] 0.982 0.976 0.877 0.0
255538970816 endoplasmin, putative [Ricinus communis] 0.993 0.996 0.869 0.0
356553371816 PREDICTED: endoplasmin homolog [Glycine 0.996 0.998 0.859 0.0
225457939818 PREDICTED: endoplasmin homolog [Vitis vi 0.946 0.946 0.883 0.0
356564371814 PREDICTED: endoplasmin homolog [Glycine 0.952 0.957 0.875 0.0
365189292812 Heat shock protein 90 [Nicotiana tabacum 0.992 1.0 0.860 0.0
365189290811 Heat shock protein 90 [Nicotiana tabacum 0.991 1.0 0.861 0.0
449469875817 PREDICTED: endoplasmin homolog [Cucumis 0.949 0.951 0.869 0.0
357438459818 Endoplasmin-like protein [Medicago trunc 0.952 0.952 0.859 0.0
147865450 1084 hypothetical protein VITISV_028074 [Viti 0.935 0.705 0.849 0.0
>gi|224085900|ref|XP_002307732.1| predicted protein [Populus trichocarpa] gi|222857181|gb|EEE94728.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1367 bits (3539), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 707/806 (87%), Positives = 758/806 (94%), Gaps = 2/806 (0%)

Query: 1   MRKWTIPSILLLLFLVALIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDV 60
           MRKWT+PS+LLLL L++LI DQG+ + AKAED+SD LVDPPKVEEKLGAVPNGLSTDSDV
Sbjct: 1   MRKWTVPSVLLLLCLLSLISDQGQKLHAKAEDDSDSLVDPPKVEEKLGAVPNGLSTDSDV 60

Query: 61  AKREAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR 120
            KRE+ESISKR+LRN AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR
Sbjct: 61  VKRESESISKRTLRNTAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIR 120

Query: 121 FLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF 180
           FLSLTDKEVLGEGDN KL+IQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF
Sbjct: 121 FLSLTDKEVLGEGDNAKLDIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAF 180

Query: 181 VEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWN 240
           VEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHN+DKQYVWESKADGAFAISEDTWN
Sbjct: 181 VEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNEDKQYVWESKADGAFAISEDTWN 240

Query: 241 EPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDS 300
           EPLGRGTEIRLHLR+EAGEYLEESKLK+LVKKYSEFINFPIY+WASKEVDV+VP DED+S
Sbjct: 241 EPLGRGTEIRLHLREEAGEYLEESKLKDLVKKYSEFINFPIYLWASKEVDVEVPADEDES 300

Query: 301 SDEEEKAEKEEETEKSESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEV 360
           SDE+E   +   ++  +SE + EDED+E KPKTK +KETT+EWELLNDVKAIWLRNPKEV
Sbjct: 301 SDEDETTAESSSSDDGDSE-KSEDEDAEDKPKTKKIKETTYEWELLNDVKAIWLRNPKEV 359

Query: 361 TEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKAN 420
           TEEEY KFYHSL KD  DEKPLAWSHF AEGDVEFKAVLFVPPKAPHDLYESYYNTNKAN
Sbjct: 360 TEEEYTKFYHSLAKDLGDEKPLAWSHFTAEGDVEFKAVLFVPPKAPHDLYESYYNTNKAN 419

Query: 421 LKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA 480
           LKLYVRRVFISDEFDELLPKYLNFL GLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA
Sbjct: 420 LKLYVRRVFISDEFDELLPKYLNFLMGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKA 479

Query: 481 LDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNR 540
           LDMIRKIA+EDPDE+  KDKKDVE  S DD+KKGQY KFWNEFGKSIKLGIIED+ NRNR
Sbjct: 480 LDMIRKIADEDPDEANDKDKKDVEN-SSDDEKKGQYAKFWNEFGKSIKLGIIEDSVNRNR 538

Query: 541 LAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEV 600
           LAKLLRFE+TKSDGKLTSLDQYISRMK+GQKDIFYITG NKEQ+EKSPFLERLKKK YEV
Sbjct: 539 LAKLLRFETTKSDGKLTSLDQYISRMKSGQKDIFYITGPNKEQVEKSPFLERLKKKGYEV 598

Query: 601 IFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKESFKELTKWWKGALASE 660
           I+FTDPVDEYLMQYLMDYED+KFQNVSKEGLKLGKD+K KELKESFKELTKWWKGALASE
Sbjct: 599 IYFTDPVDEYLMQYLMDYEDQKFQNVSKEGLKLGKDSKAKELKESFKELTKWWKGALASE 658

Query: 661 NVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHP 720
           NVDDVK+SNRL +TPC+VVTSKYGWSANMERIMQ+QTLSDA+KQAYMRGKRVLEINPRHP
Sbjct: 659 NVDDVKISNRLADTPCIVVTSKYGWSANMERIMQAQTLSDANKQAYMRGKRVLEINPRHP 718

Query: 721 IIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISPD 780
           IIKELRERVVKDPED  V+QTA L+YQTALMESGF LNDPKDFASRIYS+VKSSL+ISPD
Sbjct: 719 IIKELRERVVKDPEDDSVKQTAHLMYQTALMESGFILNDPKDFASRIYSSVKSSLSISPD 778

Query: 781 AAVEEEDDVEETDADTEMKESSAAKE 806
           A +EEEDDVEE + + E KE++++ E
Sbjct: 779 AIIEEEDDVEEVEVEAETKEATSSSE 804

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255538970|ref|XP_002510550.1| endoplasmin, putative [Ricinus communis] gi|223551251|gb|EEF52737.1| endoplasmin, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356553371|ref|XP_003545030.1| PREDICTED: endoplasmin homolog [Glycine max] Back     alignment and taxonomy information
>gi|225457939|ref|XP_002273785.1| PREDICTED: endoplasmin homolog [Vitis vinifera] gi|302142682|emb|CBI19885.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356564371|ref|XP_003550428.1| PREDICTED: endoplasmin homolog [Glycine max] Back     alignment and taxonomy information
>gi|365189292|dbj|BAL42333.1| Heat shock protein 90 [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|365189290|dbj|BAL42332.1| Heat shock protein 90 [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|449469875|ref|XP_004152644.1| PREDICTED: endoplasmin homolog [Cucumis sativus] gi|449503954|ref|XP_004162237.1| PREDICTED: endoplasmin homolog [Cucumis sativus] Back     alignment and taxonomy information
>gi|357438459|ref|XP_003589505.1| Endoplasmin-like protein [Medicago truncatula] gi|355478553|gb|AES59756.1| Endoplasmin-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|147865450|emb|CAN79404.1| hypothetical protein VITISV_028074 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query818
UNIPROTKB|B9R8A7816 RCOM_1598250 "Endoplasmin, put 0.574 0.575 0.859 0.0
TAIR|locus:2135887823 SHD "SHEPHERD" [Arabidopsis th 0.531 0.528 0.875 0.0
UNIPROTKB|Q95M18804 HSP90B1 "Endoplasmin" [Bos tau 0.341 0.347 0.452 1.3e-176
UNIPROTKB|Q29092804 HSP90B1 "Endoplasmin" [Sus scr 0.386 0.393 0.412 2.7e-176
UNIPROTKB|F1P8N6803 HSP90B1 "Endoplasmin" [Canis l 0.341 0.347 0.452 3.5e-176
UNIPROTKB|P41148804 HSP90B1 "Endoplasmin" [Canis l 0.341 0.347 0.452 3.5e-176
ZFIN|ZDB-GENE-031002-1793 hsp90b1 "heat shock protein 90 0.339 0.350 0.461 5.6e-176
MGI|MGI:98817802 Hsp90b1 "heat shock protein 90 0.341 0.347 0.445 5.6e-176
RGD|1310482804 Hsp90b1 "heat shock protein 90 0.341 0.347 0.449 7.2e-176
UNIPROTKB|Q4R520804 HSP90B1 "Endoplasmin" [Macaca 0.378 0.385 0.419 1.5e-175
UNIPROTKB|B9R8A7 RCOM_1598250 "Endoplasmin, putative" [Ricinus communis (taxid:3988)] Back     alignment and assigned GO terms
 Score = 2088 (740.1 bits), Expect = 0., Sum P(2) = 0.
 Identities = 410/477 (85%), Positives = 429/477 (89%)

Query:   345 LLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPK 404
             LLNDVKAIWLRNPK+VT+EEY KFYHSL KDF DEKPLAWSHF AEGDVEFKAVLFVPPK
Sbjct:   344 LLNDVKAIWLRNPKDVTDEEYTKFYHSLAKDFGDEKPLAWSHFTAEGDVEFKAVLFVPPK 403

Query:   405 APHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQ 464
             APHDLYESYYN NK+NLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQ
Sbjct:   404 APHDLYESYYNANKSNLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQ 463

Query:   465 QHSSLKTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFG 524
             QHSSLKTIKKKLIRKALDMIRKIA+EDPDE   +DKKDVE  S DD+KKGQY KFWNEFG
Sbjct:   464 QHSSLKTIKKKLIRKALDMIRKIADEDPDEMK-EDKKDVED-SGDDEKKGQYAKFWNEFG 521

Query:   525 KSIKLGIIEDAANRNRLAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQL 584
             KSIKLGIIEDA NRNRLAKLLRFESTKSDGKLTSLDQYISRMK+GQKDIFYITG NKEQL
Sbjct:   522 KSIKLGIIEDATNRNRLAKLLRFESTKSDGKLTSLDQYISRMKSGQKDIFYITGPNKEQL 581

Query:   585 EKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKE 644
             EKSPFLERLKKK YEVIFFTDPVDEYLMQYLMDYE KKFQNVSKEGLKLGKD+KDKELKE
Sbjct:   582 EKSPFLERLKKKGYEVIFFTDPVDEYLMQYLMDYESKKFQNVSKEGLKLGKDSKDKELKE 641

Query:   645 SFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQ 704
             SFKELTKWWKGALASENVDDVK+SNRLDNTPCVVVTSKYGWSANMERIM SQTLSDASKQ
Sbjct:   642 SFKELTKWWKGALASENVDDVKISNRLDNTPCVVVTSKYGWSANMERIMSSQTLSDASKQ 701

Query:   705 AYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFA 764
             AYMRGKRVLEINPRHPIIKELRERVVKDPED  V++TAQLIYQTALMESGF LNDPKDFA
Sbjct:   702 AYMRGKRVLEINPRHPIIKELRERVVKDPEDDSVKETAQLIYQTALMESGFMLNDPKDFA 761

Query:   765 SRIYSTVKSSLNISPXXXXXXXXXXXXXXXXXXMK---ESSAAKEDVDTEYSGKDEL 818
             SRIY++VKSSL+ISP                   +   ++ A+K D DT+   KDEL
Sbjct:   762 SRIYNSVKSSLDISPEATVEEEDDVEETEAETETENKGDTEASKPDADTD--AKDEL 816
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2135887 SHD "SHEPHERD" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q95M18 HSP90B1 "Endoplasmin" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q29092 HSP90B1 "Endoplasmin" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1P8N6 HSP90B1 "Endoplasmin" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P41148 HSP90B1 "Endoplasmin" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-031002-1 hsp90b1 "heat shock protein 90, beta (grp94), member 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:98817 Hsp90b1 "heat shock protein 90, beta (Grp94), member 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1310482 Hsp90b1 "heat shock protein 90, beta, member 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q4R520 HSP90B1 "Endoplasmin" [Macaca fascicularis (taxid:9541)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P24724HSP90_THEPANo assigned EC number0.47630.84710.9611yesno
P41887HSP90_SCHPONo assigned EC number0.49710.81410.9460yesno
Q29092ENPL_PIGNo assigned EC number0.49870.89480.9104yesno
P36183ENPL_HORVUNo assigned EC number0.80560.94620.9567N/Ano
Q7PT10HSP83_ANOGANo assigned EC number0.49370.82880.9416yesno
O18750ENPL_RABITNo assigned EC number0.50560.80310.9175yesno
Q25293HSP83_LEIINNo assigned EC number0.46400.85080.9928yesno
Q9STX5ENPL_ARATHNo assigned EC number0.82560.94740.9416yesno
Q4UDU8HSP90_THEANNo assigned EC number0.47220.84840.9612yesno
Q95M18ENPL_BOVINNo assigned EC number0.49870.89480.9104yesno
P35016ENPL_CATRONo assigned EC number0.83740.99871.0N/Ano
P41148ENPL_CANFANo assigned EC number0.49870.89480.9104yesno
P14625ENPL_HUMANNo assigned EC number0.49620.89480.9115yesno
P54651HSC90_DICDINo assigned EC number0.48100.82760.9671yesno
P08110ENPL_CHICKNo assigned EC number0.50590.86180.8867yesno
P51819HSP83_IPONINo assigned EC number0.50550.82150.9559N/Ano
P08113ENPL_MOUSENo assigned EC number0.49180.89600.9139yesno
Q5R6F7ENPL_PONABNo assigned EC number0.49490.89480.9104yesno
Q66HD0ENPL_RATNo assigned EC number0.49430.89600.9116yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query818
pfam00183529 pfam00183, HSP90, Hsp90 protein 0.0
PRK05218613 PRK05218, PRK05218, heat shock protein 90; Provisi 0.0
COG0326623 COG0326, HtpG, Molecular chaperone, HSP90 family [ 0.0
PTZ00272701 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp 0.0
PTZ00130814 PTZ00130, PTZ00130, heat shock protein 90; Provisi 1e-172
PRK14083601 PRK14083, PRK14083, HSP90 family protein; Provisio 5e-32
cd00075103 cd00075, HATPase_c, Histidine kinase-like ATPases; 5e-10
smart00387111 smart00387, HATPase_c, Histidine kinase-like ATPas 1e-09
pfam02518111 pfam02518, HATPase_c, Histidine kinase-, DNA gyras 6e-09
pfam13589134 pfam13589, HATPase_c_3, Histidine kinase-, DNA gyr 1e-05
TIGR009271096 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger 2e-04
TIGR00585312 TIGR00585, mutl, DNA mismatch repair protein MutL 0.002
TIGR01052488 TIGR01052, top6b, DNA topoisomerase VI, B subunit 0.003
>gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein Back     alignment and domain information 
 Score =  730 bits (1885), Expect = 0.0
 Identities = 318/557 (57%), Positives = 405/557 (72%), Gaps = 34/557 (6%)

Query: 259 EYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDSSDEEEKAEKEEETEKSES 318
           EYLEE ++KELVKK+SEFIN+PIY+W  KEV+ +VP +E++   EE+K E+E+ T+K E 
Sbjct: 1   EYLEERRIKELVKKHSEFINYPIYLWVEKEVEKEVPDEEEEEEKEEKKEEEEKTTDKEEE 60

Query: 319 ESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSD 378
             E+E+++ EKK KTK VKETT EWELLN  K IW RNPK+VT+EEYA FY SL  D+ D
Sbjct: 61  VDEEEEKE-EKKKKTKKVKETTTEWELLNKTKPIWTRNPKDVTKEEYAAFYKSLTNDWED 119

Query: 379 EKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELL 438
             PLA  HF+ EG +EF+A+LFVP +AP DL+ESY    K N+KLYVRRVFI D+ ++L+
Sbjct: 120 --PLAVKHFSVEGQLEFRAILFVPKRAPFDLFESY--KKKNNIKLYVRRVFIMDDCEDLI 175

Query: 439 PKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEEDPDESTGK 498
           P+YL+F+KG+VDS+ LPLN+SREMLQQ+  LK I+K L++K L+M  +IAE         
Sbjct: 176 PEYLSFVKGVVDSEDLPLNISREMLQQNKILKVIRKNLVKKCLEMFNEIAE--------- 226

Query: 499 DKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTKSDGKLTS 558
                         K QY KF+ EF K+IKLGI EDAANR +LAKLLRFESTKS  +LTS
Sbjct: 227 -------------DKEQYKKFYEEFSKNIKLGIHEDAANRAKLAKLLRFESTKSGDELTS 273

Query: 559 LDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDY 618
           LD Y++RMK GQKDI+YITG +K+Q+EKSPFLERLKKK YEV++ TDP+DEY MQ L ++
Sbjct: 274 LDDYVTRMKEGQKDIYYITGESKKQVEKSPFLERLKKKGYEVLYMTDPIDEYAMQQLKEF 333

Query: 619 EDKKFQNVSKEGLKLGKD----TKDKELKESFKELTKWWKGALASENVDDVKVSNRLDNT 674
           E KK  NV+KEGLKL +      K +ELK+ F+EL KW K  L  + V+ V VSNRL ++
Sbjct: 334 EGKKLVNVTKEGLKLEESEEEKKKREELKKEFEELCKWMKDIL-GDKVEKVVVSNRLVDS 392

Query: 675 PCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPE 734
           PC +VTS+YGWSANMERIM++Q L D+S  AYM  K+ LEINPRHPIIKELR+RV  D  
Sbjct: 393 PCALVTSQYGWSANMERIMKAQALRDSSMSAYMSSKKTLEINPRHPIIKELRKRVEADKN 452

Query: 735 DAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNISPDAAVEEEDDVEETDA 794
           D  V+  A+L+Y+TAL+ SGFSL DPK FASRIY  +K  L+I  D  VEEED+  E + 
Sbjct: 453 DKTVKDLARLLYETALLTSGFSLEDPKAFASRIYRMIKLGLSIDEDEEVEEEDEEAEVET 512

Query: 795 DTEMKESSAAK--EDVD 809
               +E +     E+VD
Sbjct: 513 TEPAEEDAEDSKMEEVD 529

Length = 529
>gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional Back     alignment and domain information
>gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional Back     alignment and domain information
>gnl|CDD|237603 PRK14083, PRK14083, HSP90 family protein; Provisional Back     alignment and domain information
>gnl|CDD|238030 cd00075, HATPase_c, Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins Back     alignment and domain information
>gnl|CDD|214643 smart00387, HATPase_c, Histidine kinase-like ATPases Back     alignment and domain information
>gnl|CDD|217081 pfam02518, HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Back     alignment and domain information
>gnl|CDD|222246 pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Back     alignment and domain information
>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger Back     alignment and domain information
>gnl|CDD|233035 TIGR00585, mutl, DNA mismatch repair protein MutL Back     alignment and domain information
>gnl|CDD|233250 TIGR01052, top6b, DNA topoisomerase VI, B subunit Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 818
KOG0020785 consensus Endoplasmic reticulum glucose-regulated 100.0
PTZ00130814 heat shock protein 90; Provisional 100.0
PTZ00272701 heat shock protein 83 kDa (Hsp83); Provisional 100.0
KOG0019656 consensus Molecular chaperone (HSP90 family) [Post 100.0
COG0326623 HtpG Molecular chaperone, HSP90 family [Posttransl 100.0
PRK05218613 heat shock protein 90; Provisional 100.0
PF00183531 HSP90: Hsp90 protein; InterPro: IPR001404 Molecula 100.0
PRK14083601 HSP90 family protein; Provisional 100.0
PF13589137 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and 99.63
TIGR00585312 mutl DNA mismatch repair protein MutL. All protein 99.36
COG1389538 DNA topoisomerase VI, subunit B [DNA replication, 99.23
PRK00095617 mutL DNA mismatch repair protein; Reviewed 99.12
PRK04184535 DNA topoisomerase VI subunit B; Validated 99.08
COG0323638 MutL DNA mismatch repair enzyme (predicted ATPase) 99.06
TIGR01052488 top6b DNA topoisomerase VI, B subunit. This model 98.95
PRK14868795 DNA topoisomerase VI subunit B; Provisional 98.81
PRK14867659 DNA topoisomerase VI subunit B; Provisional 98.4
PRK05559631 DNA topoisomerase IV subunit B; Reviewed 98.35
PF02518111 HATPase_c: Histidine kinase-, DNA gyrase B-, and H 98.29
TIGR01055625 parE_Gneg DNA topoisomerase IV, B subunit, proteob 98.16
smart00433594 TOP2c TopoisomeraseII. Eukaryotic DNA topoisomeras 98.14
KOG1979694 consensus DNA mismatch repair protein - MLH1 famil 98.08
TIGR01059654 gyrB DNA gyrase, B subunit. This model describes t 97.99
PRK14939756 gyrB DNA gyrase subunit B; Provisional 97.94
PRK05644638 gyrB DNA gyrase subunit B; Validated 97.92
KOG1978672 consensus DNA mismatch repair protein - MLH2/PMS1/ 97.87
cd00075103 HATPase_c Histidine kinase-like ATPases; This fami 97.21
KOG1977 1142 consensus DNA mismatch repair protein - MLH3 famil 97.11
PRK10755356 sensor protein BasS/PmrB; Provisional 96.97
TIGR02916679 PEP_his_kin putative PEP-CTERM system histidine ki 96.82
smart00387111 HATPase_c Histidine kinase-like ATPases. Histidine 96.75
TIGR01058637 parE_Gpos DNA topoisomerase IV, B subunit, Gram-po 96.72
PRK11100475 sensory histidine kinase CreC; Provisional 96.67
PRK10549466 signal transduction histidine-protein kinase BaeS; 96.61
TIGR02938494 nifL_nitrog nitrogen fixation negative regulator N 96.6
TIGR01386457 cztS_silS_copS heavy metal sensor kinase. Members 96.57
PRK11086542 sensory histidine kinase DcuS; Provisional 96.54
PRK11006430 phoR phosphate regulon sensor protein; Provisional 96.51
PRK10604433 sensor protein RstB; Provisional 96.39
TIGR02966333 phoR_proteo phosphate regulon sensor kinase PhoR. 96.25
PRK09470461 cpxA two-component sensor protein; Provisional 96.21
PRK10364457 sensor protein ZraS; Provisional 96.16
PRK15347921 two component system sensor kinase SsrA; Provision 96.11
PRK11360607 sensory histidine kinase AtoS; Provisional 96.1
PRK15053545 dpiB sensor histidine kinase DpiB; Provisional 96.09
PRK10815485 sensor protein PhoQ; Provisional 96.09
PRK11466914 hybrid sensory histidine kinase TorS; Provisional 96.06
PLN03237 1465 DNA topoisomerase 2; Provisional 96.01
PLN03128 1135 DNA topoisomerase 2; Provisional 95.95
TIGR02956968 TMAO_torS TMAO reductase sytem sensor TorS. This p 95.93
COG0187635 GyrB Type IIA topoisomerase (DNA gyrase/topo II, t 95.87
PHA02569602 39 DNA topoisomerase II large subunit; Provisional 95.75
KOG0019656 consensus Molecular chaperone (HSP90 family) [Post 95.63
PTZ00108 1388 DNA topoisomerase 2-like protein; Provisional 95.39
PRK09303380 adaptive-response sensory kinase; Validated 95.31
PRK09467435 envZ osmolarity sensor protein; Provisional 95.26
TIGR03785703 marine_sort_HK proteobacterial dedicated sortase s 94.92
PRK10337449 sensor protein QseC; Provisional 94.9
PRK11107919 hybrid sensory histidine kinase BarA; Provisional 94.73
PRK11091779 aerobic respiration control sensor protein ArcB; P 94.63
PRK13837828 two-component VirA-like sensor kinase; Provisional 94.55
PRK10618894 phosphotransfer intermediate protein in two-compon 94.48
PRK03660146 anti-sigma F factor; Provisional 94.43
PRK10841924 hybrid sensory kinase in two-component regulatory 94.33
PRK10600569 nitrate/nitrite sensor protein NarX; Provisional 94.32
TIGR01925137 spIIAB anti-sigma F factor. This model describes t 94.28
PTZ00109903 DNA gyrase subunit b; Provisional 94.21
PRK10547670 chemotaxis protein CheA; Provisional 94.21
PRK10490895 sensor protein KdpD; Provisional 93.96
COG3290537 CitA Signal transduction histidine kinase regulati 93.49
COG4191603 Signal transduction histidine kinase regulating C4 93.44
PRK099591197 hybrid sensory histidine kinase in two-component r 93.2
PRK09835482 sensor kinase CusS; Provisional 92.91
PRK13557540 histidine kinase; Provisional 92.88
COG0642336 BaeS Signal transduction histidine kinase [Signal 92.62
PF13581125 HATPase_c_2: Histidine kinase-like ATPase domain 91.8
PRK11073348 glnL nitrogen regulation protein NR(II); Provision 91.12
PRK04069161 serine-protein kinase RsbW; Provisional 91.05
TIGR01924159 rsbW_low_gc serine-protein kinase RsbW. This model 90.8
COG5000712 NtrY Signal transduction histidine kinase involved 90.39
COG3920221 Signal transduction histidine kinase [Signal trans 89.19
PRK13560807 hypothetical protein; Provisional 88.77
KOG0787414 consensus Dehydrogenase kinase [Signal transductio 86.93
COG0643716 CheA Chemotaxis protein histidine kinase and relat 86.73
PRK11644495 sensory histidine kinase UhpB; Provisional 85.48
COG4585365 Signal transduction histidine kinase [Signal trans 84.55
COG4251750 Bacteriophytochrome (light-regulated signal transd 84.4
COG2172146 RsbW Anti-sigma regulatory factor (Ser/Thr protein 82.69
>KOG0020 consensus Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=2.9e-215  Score=1724.17  Aligned_cols=738  Identities=61%  Similarity=0.998  Sum_probs=691.5

Q ss_pred             CCcccchhHHHHHHHHHhcCCCcccccccccccccccCCCcccccccCCCCCCCCCchhhhhhhhhhhh--------hhh
Q 003458            1 MRKWTIPSILLLLFLVALIPDQGRNIQAKAEDESDKLVDPPKVEEKLGAVPNGLSTDSDVAKREAESIS--------KRS   72 (818)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~   72 (818)
                      ||.+.+.+++||+.+++++++..+.+++             .+++++|.+++|++++.++++|++++|+        .|+
T Consensus         1 m~~~~lv~~~~L~~~~~l~ad~~~~~~~-------------~~ee~~~~~~e~sk~e~e~~~ree~si~lDgl~~~q~ke   67 (785)
T KOG0020|consen    1 MRKRTLVSVLLLFGFLFLLADDERKLHA-------------TAEEDLGDVTEGSKTEEEIGGREEESIQLDGLNVSQIKE   67 (785)
T ss_pred             CcchhHHHHHHHHHHHHhcccccccccc-------------chhhhccccCCCCcchhhhccccchheecccccHHHHHH
Confidence            7888888888887777888777655553             4667799999999999999999999998        789


Q ss_pred             ccccccccchhhhHHHHHHHHHHcCCCCchhHHHHhhhcHHHHHHHHHHhhccCccccCCCCCCccEEEEEEeCCCcEEE
Q 003458           73 LRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILS  152 (818)
Q Consensus        73 ~~~~~e~~~Fqaev~~ll~ll~~sLYs~~~ifLRELIqNA~DA~~k~r~~~l~~~~~~g~~~~~~~~I~I~~d~~~~~L~  152 (818)
                      +|+.+++|+||++|+|||+||+||||+|++||||||||||+||++|+|+++|+++.++  +.++++.|+|..|++++.|+
T Consensus        68 lR~kaeKf~FQaEVnRmMklIINSLY~NKeIFLRELISNASDAlDKIRllaLtd~~~L--~~~~el~ikIK~Dke~klLh  145 (785)
T KOG0020|consen   68 LRSKAEKFEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLALTDKDVL--GETEELEIKIKADKEKKLLH  145 (785)
T ss_pred             HHHHhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhhheeeeeccChhHh--CcCcceEEEEeechhhCeee
Confidence            9999999999999999999999999999999999999999999999999999999999  67899999999999999999


Q ss_pred             EEeCCCCCCHHHHHHHHHHHhccCchhHHHhhhhcCCC-----CccccccccceeeeeeccEEEEEEeeCCCeeEEEEEc
Q 003458          153 IRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDL-----NLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESK  227 (818)
Q Consensus       153 I~DNGiGMT~~dL~~~LgtIa~Sg~~~f~~~l~~~~~~-----~~IGqFGIGF~S~F~VadkV~V~Sk~~~d~~~~W~s~  227 (818)
                      |+|+|||||++||++||||||+||+++|+++|++.++.     ++||||||||||+|+|||+|+|+|+|+++.+|+|+|+
T Consensus       146 i~DtGiGMT~edLi~NLGTIAkSGTs~Fl~Km~~~~~~~~~~~dlIGQFGVGFYsAfLVAD~vvVtsKhNdD~QyiWESd  225 (785)
T KOG0020|consen  146 ITDTGIGMTREDLIKNLGTIAKSGTSEFLEKMQDSGDSEGLMNDLIGQFGVGFYSAFLVADRVVVTSKHNDDSQYIWESD  225 (785)
T ss_pred             EecccCCccHHHHHHhhhhhhcccHHHHHHHhhccccchhhHHHHHHhcchhhhhhhhhcceEEEEeccCCccceeeecc
Confidence            99999999999999999999999999999999875443     7999999999999999999999999999999999999


Q ss_pred             CCCceEEEeCCCCCCCCCCcEEEEEecccccccccHHHHHHHHHHhcCCCCcceEEeecccccccCCCCCCCCchhHHHh
Q 003458          228 ADGAFAISEDTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDSSDEEEKA  307 (818)
Q Consensus       228 ~~~~f~i~~~~~~~~~~~GT~I~L~Lk~~~~e~l~~~~l~~lv~kys~fi~~PI~l~~~~~~~~~~~~~~~~~~~~~~~~  307 (818)
                      +. .|+|.++|++++++|||+|+|||++++.+||++++|++||++||+||+|||++|.++++++|+|.+|+++..++.  
T Consensus       226 an-~FsvseDprg~tL~RGt~ItL~LkeEA~dyLE~dtlkeLvkkYSqFINFpI~lWsSKt~~~E~pvEEe~~t~e~~--  302 (785)
T KOG0020|consen  226 AN-SFSVSEDPRGNTLGRGTEITLYLKEEAGDYLEEDTLKELVKKYSQFINFPISLWSSKTVEVEVPVEEEEETEEDS--  302 (785)
T ss_pred             Cc-ceeeecCCCCCcccCccEEEEEehhhhhhhcchhHHHHHHHHHHHhcCCceeeeeccceeeeccccccccccccc--
Confidence            87 999999999999999999999999999999999999999999999999999999999999999987754322110  


Q ss_pred             hhhhhhhcccCCCCccccccccCCCcccceecccceeeccccCcccccCCCCCCHHHHHHHHHhhhcCCCCCCCceeeee
Q 003458          308 EKEEETEKSESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHF  387 (818)
Q Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~e~iN~~~piW~r~~~ev~~eey~~Fyk~~~~~~~~~~PL~~~hf  387 (818)
                        .+  +++    ..++++++++||||+|++|+|+|+.+|+.+|||+|+|++|+++||..|||++++|+  .+||+|+||
T Consensus       303 --~e--d~e----a~vEEee~EKpKTKKV~kT~wdWel~NdvKpIW~R~p~eV~EdEYt~FYkSlsKds--~dPma~~HF  372 (785)
T KOG0020|consen  303 --TE--DKE----AAVEEEEEEKPKTKKVEKTVWDWELLNDVKPIWLRKPKEVTEDEYTKFYKSLSKDS--TDPMAYIHF  372 (785)
T ss_pred             --cc--chh----hhhhhhhhccccccchhhcchhhhhhcccchhhccCchhcchHHHHHHHHhhhccc--cCccceeee
Confidence              00  111    12334445569999999999999999999999999999999999999999999999  889999999


Q ss_pred             ecccceeeEEEEEecCCCCcchhhhhhcccccceEEEeeccccccchhhhhHhhhhcccceecCCCCCCccchhhhccch
Q 003458          388 NAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHS  467 (818)
Q Consensus       388 ~~eg~~~f~~llfiP~~~p~~~~~~~~~~~~~~ikLYvrrVfI~d~~~~llP~yl~Fv~GVVDS~dLpLNvSRE~lQ~~~  467 (818)
                      ++||+|+|++|||||+.+|.++|++||++.+.+||||||||||||+|.++||+||+||||||||||||||||||+||||+
T Consensus       373 ~aEGeVtFksiLyVP~~~P~~lf~~Yg~~~~dniKLYVrrVFItDeF~dmmPkYLsFikGvVDSDdLPLNVSrE~LQQHk  452 (785)
T KOG0020|consen  373 TAEGEVTFKSILYVPKKAPRDLFDEYGSKKSDNIKLYVRRVFITDEFHDMMPKYLSFIKGVVDSDDLPLNVSRETLQQHK  452 (785)
T ss_pred             eccccEEEEEEEEeCCCCchHHHHHhccccccceeEEEEEEEecchHHHHhHHHHHHHhhccCcCcCcccccHHHHHHHH
Confidence            99999999999999999999999999878899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCcccccccCCCcchhhHHHH-HHHHHhHHhhhhcccCHHhHHHHhcccc
Q 003458          468 SLKTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTK-FWNEFGKSIKLGIIEDAANRNRLAKLLR  546 (818)
Q Consensus       468 ~l~~I~k~l~~k~l~~l~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~-f~~~f~~~iK~G~~eD~~nr~~lakLLr  546 (818)
                      +|++|+|+||||+|+||++++.+                        +|.. ||++||++||+|++||++||.+||+|||
T Consensus       453 llKvIkKKLvrK~LDmikKia~e------------------------~~~d~FW~EFgtniKLGviED~sNr~rLAKLLr  508 (785)
T KOG0020|consen  453 LLKVIKKKLVRKVLDMIKKIAGE------------------------KYDDIFWKEFGTNIKLGVIEDPSNRTRLAKLLR  508 (785)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcc------------------------ccchHHHHHhccceeeeeeeCcccHHHHHHHHh
Confidence            99999999999999999999987                        7777 9999999999999999999999999999


Q ss_pred             ceecCCCCcccCHHHHHhhccCCCceEEEEeCCCHHHHhcChhHHHHHhcCCeEEecCCCchHHHHHhhhhcCCCceEee
Q 003458          547 FESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNV  626 (818)
Q Consensus       547 F~ss~~~~~~~SL~eYv~rmke~Qk~IYY~tg~s~~~~~~SP~lE~~~~kG~EVL~ltdpiDE~~i~~L~ef~gkkf~~V  626 (818)
                      |+||+++++.+||++|++|||+.|+.|||++|.|++++++|||+|+|.+|||||||||+||||||||.|++|+||+||||
T Consensus       509 Fqss~~~~~~TsLdqYveRMK~kQ~~IyymaGssr~e~E~sPfvERLlkKGyEVi~ltepVDEyciqalpe~d~KkFQNV  588 (785)
T KOG0020|consen  509 FQSSNHPTKITSLDQYVERMKEKQDKIYYMAGSSRKEVEKSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKKFQNV  588 (785)
T ss_pred             hhccCCCCCcccHHHHHHHHhhccccEEEecCCcHhhhccCcHHHHHHhcCceEEEEcchhHHHHHHhhhhhcchhHhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCcc--h--HHHHHHHHHHHHHHH-hhcCCCCccEEEEeeccCCCCeEEEecCCcchHHHHHHHHHhccc--
Q 003458          627 SKEGLKLGKDTK--D--KELKESFKELTKWWK-GALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLS--  699 (818)
Q Consensus       627 ~k~~~~l~~~ek--~--~~~~~~~~~L~~~lK-~~L~~~~V~~V~vS~RL~~sP~~lv~~~~g~s~~MeRimkaqa~~--  699 (818)
                      +|+|+++++++|  +  +..+++|+||++||| .+|+++ |++++||+||++|||+||+++||||+||||||++|+++  
T Consensus       589 aKEG~k~~~~eK~Ke~~e~l~~~FepL~~W~k~~alkd~-ieka~vSqrL~~spcalVas~~GwsgNmERimksqa~~~~  667 (785)
T KOG0020|consen  589 AKEGVKFDKSEKTKESHEALEEEFEPLTKWLKDKALKDK-IEKAVVSQRLTESPCALVASQYGWSGNMERIMKSQAYQKS  667 (785)
T ss_pred             HhhhcccCcccchhHHHHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHHHhccCchhhhhhhccccccHHHHHHHhhhhcc
Confidence            999999987773  3  668999999999999 578888 99999999999999999999999999999999999996  


Q ss_pred             -cchhhhhcccccceeeCCCChHHHHHHHhhccCCCchhHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhhcCCC
Q 003458          700 -DASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLNIS  778 (818)
Q Consensus       700 -d~~~~~~~~~kkiLEINp~HPlIk~L~~~~~~d~~d~~~~~~a~~Lyd~AlL~sG~~l~D~~~fa~ri~~ll~~~l~~~  778 (818)
                       |++.+.|+.+|++|||||+||||+.|++|+..|+.|+.++++|.+||+||+|+|||.+.||.+|+.||++||+++|+|+
T Consensus       668 kD~~~~~Y~~qKkt~EINPRHPlirell~Ri~adeeD~t~~d~A~lmf~TAtlrSGf~L~d~~~fadrIe~~lr~sL~is  747 (785)
T KOG0020|consen  668 KDPSKNYYASQKKTFEINPRHPLIRELLRRIAADEEDETVKDTAVLMFETATLRSGFILQDTKDFADRIENMLRQSLNIS  747 (785)
T ss_pred             CCchhhHHhccCceeeeCCCChHHHHHHHHhhcCcccchHHHHHHHHHHHHHhhcCccccchHHHHHHHHHHHHhhcCCC
Confidence             7777789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCccC
Q 003458          779 PDAAVEEEDDVEE  791 (818)
Q Consensus       779 ~~~~~~~~~~~~~  791 (818)
                      +|++++++.++++
T Consensus       748 ~Da~ve~e~e~ee  760 (785)
T KOG0020|consen  748 PDAQVEEEIEEEE  760 (785)
T ss_pred             ccccccccccccc
Confidence            9998877655443

>PTZ00130 heat shock protein 90; Provisional Back     alignment and domain information
>PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional Back     alignment and domain information
>KOG0019 consensus Molecular chaperone (HSP90 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05218 heat shock protein 90; Provisional Back     alignment and domain information
>PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] Back     alignment and domain information
>PRK14083 HSP90 family protein; Provisional Back     alignment and domain information
>PF13589 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PDB: 3IED_A 2XCM_B 2JKI_B 3OPD_A 2O1V_B 2GQP_A 2O1W_C 1YT2_A 1TC6_A 2H8M_B Back     alignment and domain information
>TIGR00585 mutl DNA mismatch repair protein MutL Back     alignment and domain information
>COG1389 DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK00095 mutL DNA mismatch repair protein; Reviewed Back     alignment and domain information
>PRK04184 DNA topoisomerase VI subunit B; Validated Back     alignment and domain information
>COG0323 MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] Back     alignment and domain information
>TIGR01052 top6b DNA topoisomerase VI, B subunit Back     alignment and domain information
>PRK14868 DNA topoisomerase VI subunit B; Provisional Back     alignment and domain information
>PRK14867 DNA topoisomerase VI subunit B; Provisional Back     alignment and domain information
>PRK05559 DNA topoisomerase IV subunit B; Reviewed Back     alignment and domain information
>PF02518 HATPase_c: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro: IPR003594 This domain is found in several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases [], heat shock protein HSP90 [, , ], phytochrome-like ATPases and DNA mismatch repair proteins Back     alignment and domain information
>TIGR01055 parE_Gneg DNA topoisomerase IV, B subunit, proteobacterial Back     alignment and domain information
>smart00433 TOP2c TopoisomeraseII Back     alignment and domain information
>KOG1979 consensus DNA mismatch repair protein - MLH1 family [Replication, recombination and repair] Back     alignment and domain information
>TIGR01059 gyrB DNA gyrase, B subunit Back     alignment and domain information
>PRK14939 gyrB DNA gyrase subunit B; Provisional Back     alignment and domain information
>PRK05644 gyrB DNA gyrase subunit B; Validated Back     alignment and domain information
>KOG1978 consensus DNA mismatch repair protein - MLH2/PMS1/Pms2 family [Replication, recombination and repair] Back     alignment and domain information
>cd00075 HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins Back     alignment and domain information
>KOG1977 consensus DNA mismatch repair protein - MLH3 family [Replication, recombination and repair] Back     alignment and domain information
>PRK10755 sensor protein BasS/PmrB; Provisional Back     alignment and domain information
>TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase Back     alignment and domain information
>smart00387 HATPase_c Histidine kinase-like ATPases Back     alignment and domain information
>TIGR01058 parE_Gpos DNA topoisomerase IV, B subunit, Gram-positive Back     alignment and domain information
>PRK11100 sensory histidine kinase CreC; Provisional Back     alignment and domain information
>PRK10549 signal transduction histidine-protein kinase BaeS; Provisional Back     alignment and domain information
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL Back     alignment and domain information
>TIGR01386 cztS_silS_copS heavy metal sensor kinase Back     alignment and domain information
>PRK11086 sensory histidine kinase DcuS; Provisional Back     alignment and domain information
>PRK11006 phoR phosphate regulon sensor protein; Provisional Back     alignment and domain information
>PRK10604 sensor protein RstB; Provisional Back     alignment and domain information
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR Back     alignment and domain information
>PRK09470 cpxA two-component sensor protein; Provisional Back     alignment and domain information
>PRK10364 sensor protein ZraS; Provisional Back     alignment and domain information
>PRK15347 two component system sensor kinase SsrA; Provisional Back     alignment and domain information
>PRK11360 sensory histidine kinase AtoS; Provisional Back     alignment and domain information
>PRK15053 dpiB sensor histidine kinase DpiB; Provisional Back     alignment and domain information
>PRK10815 sensor protein PhoQ; Provisional Back     alignment and domain information
>PRK11466 hybrid sensory histidine kinase TorS; Provisional Back     alignment and domain information
>PLN03237 DNA topoisomerase 2; Provisional Back     alignment and domain information
>PLN03128 DNA topoisomerase 2; Provisional Back     alignment and domain information
>TIGR02956 TMAO_torS TMAO reductase sytem sensor TorS Back     alignment and domain information
>COG0187 GyrB Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] Back     alignment and domain information
>PHA02569 39 DNA topoisomerase II large subunit; Provisional Back     alignment and domain information
>KOG0019 consensus Molecular chaperone (HSP90 family) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00108 DNA topoisomerase 2-like protein; Provisional Back     alignment and domain information
>PRK09303 adaptive-response sensory kinase; Validated Back     alignment and domain information
>PRK09467 envZ osmolarity sensor protein; Provisional Back     alignment and domain information
>TIGR03785 marine_sort_HK proteobacterial dedicated sortase system histidine kinase Back     alignment and domain information
>PRK10337 sensor protein QseC; Provisional Back     alignment and domain information
>PRK11107 hybrid sensory histidine kinase BarA; Provisional Back     alignment and domain information
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional Back     alignment and domain information
>PRK13837 two-component VirA-like sensor kinase; Provisional Back     alignment and domain information
>PRK10618 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional Back     alignment and domain information
>PRK03660 anti-sigma F factor; Provisional Back     alignment and domain information
>PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional Back     alignment and domain information
>PRK10600 nitrate/nitrite sensor protein NarX; Provisional Back     alignment and domain information
>TIGR01925 spIIAB anti-sigma F factor Back     alignment and domain information
>PTZ00109 DNA gyrase subunit b; Provisional Back     alignment and domain information
>PRK10547 chemotaxis protein CheA; Provisional Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms] Back     alignment and domain information
>COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms] Back     alignment and domain information
>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional Back     alignment and domain information
>PRK09835 sensor kinase CusS; Provisional Back     alignment and domain information
>PRK13557 histidine kinase; Provisional Back     alignment and domain information
>COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>PF13581 HATPase_c_2: Histidine kinase-like ATPase domain Back     alignment and domain information
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional Back     alignment and domain information
>PRK04069 serine-protein kinase RsbW; Provisional Back     alignment and domain information
>TIGR01924 rsbW_low_gc serine-protein kinase RsbW Back     alignment and domain information
>COG5000 NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms] Back     alignment and domain information
>COG3920 Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>PRK13560 hypothetical protein; Provisional Back     alignment and domain information
>KOG0787 consensus Dehydrogenase kinase [Signal transduction mechanisms] Back     alignment and domain information
>COG0643 CheA Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms] Back     alignment and domain information
>PRK11644 sensory histidine kinase UhpB; Provisional Back     alignment and domain information
>COG4585 Signal transduction histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms] Back     alignment and domain information
>COG2172 RsbW Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query818
2o1u_A666 Structure Of Full Length Grp94 With Amp-Pnp Bound L 1e-118
2o1t_A450 Structure Of Middle Plus C-Terminal Domains (M+c) O 1e-117
3hjc_A444 Crystal Structure Of The Carboxy-Terminal Domain Of 1e-109
3q6m_A448 Crystal Structure Of Human Mc-Hsp90 In C2221 Space 1e-103
2cg9_A677 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 1e-101
2cge_A405 Crystal Structure Of An Hsp90-Sba1 Closed Chaperone 2e-99
2o1w_A506 Structure Of N-Terminal Plus Middle Domains (N+m) O 6e-83
2iop_A624 Crystal Structure Of Full-Length Htpg, The Escheric 3e-74
3pry_A268 Crystal Structure Of The Middle Domain Of Human Hsp 8e-73
1hk7_A288 Middle Domain Of Hsp90 Length = 288 2e-70
1usv_A260 The Structure Of The Complex Between Aha1 And Hsp90 1e-69
1usu_A260 The Structure Of The Complex Between Aha1 And Hsp90 2e-69
1y4s_A559 Conformation Rearrangement Of Heat Shock Protein 90 9e-69
3peh_A281 Crystal Structure Of The N-Terminal Domain Of An Hs 2e-62
1u0y_A273 N-Domain Of Grp94, With The Charged Domain, In Comp 9e-61
1u2o_A236 Crystal Structure Of The N-Domain Of Grp94 Lacking 9e-61
1qy5_A269 Crystal Structure Of The N-Domain Of The Er Hsp90 C 1e-60
2gq0_A303 Crystal Structure Of The Middle Domain Of Htpg, The 2e-60
3ft5_A249 Structure Of Hsp90 Bound With A Novel Fragment Leng 3e-60
2xjj_A249 Structre Of Hsp90 With Small Molecule Inhibitor Bou 6e-60
2xjg_A249 Structure Of Hsp90 With Small Molecule Inhibitor Bo 6e-60
1uyi_A236 Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-F 6e-60
3k60_A223 Crystal Structure Of N-Terminal Domain Of Plasmodiu 7e-60
2esa_A236 Grp94 N-Terminal Domain Bound To Geldanamycin: Effe 7e-60
1uy6_A236 Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy- 8e-60
3qdd_A237 Hsp90a N-Terminal Domain In Complex With Biib021 Le 8e-60
2bsm_A235 Novel, Potent Small Molecule Inhibitors Of The Mole 8e-60
3hhu_A224 Human Heat-Shock Protein 90 (Hsp90) In Complex With 9e-60
3d0b_A232 Crystal Structure Of Benzamide Tetrahydro-4h-Carbaz 9e-60
2yi0_A229 Structural Characterization Of 5-Aryl-4-(5-Substitu 1e-59
2fwy_A256 Structure Of Human Hsp90-Alpha Bound To The Potent 1e-59
3bm9_A226 Discovery Of Benzisoxazoles As Potent Inhibitors Of 1e-59
2ye7_A252 Hsp90 Inhibitors And Drugs From Fragment And Virtua 1e-59
3inw_A228 Hsp90 N-Terminal Domain With Pochoxime A Length = 2 1e-59
2xdu_A236 Structre Of Hsp90 With Small Molecule Inhibitor Bou 1e-59
4egh_A232 Hsp90-Alpha Atpase Domain In Complex With (4-Hydrox 1e-59
3b24_A229 Hsp90 Alpha N-Terminal Domain In Complex With An Am 1e-59
4awo_A230 Complex Of Hsp90 Atpase Domain With Tropane Derived 1e-59
2ccs_A236 Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Py 1e-59
3r4m_A228 Optimization Of Potent, Selective, And Orally Bioav 1e-59
2jjc_A218 Hsp90 Alpha Atpase Domain With Bound Small Molecule 1e-59
4eeh_A229 Hsp90 Alpha N-Terminal Domain In Complex With An In 2e-59
3k98_A232 Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-C 2e-59
3eko_A226 Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 2e-59
2ye2_A252 Hsp90 Inhibitors And Drugs From Fragment And Virtua 2e-59
3k97_A251 Hsp90 N-Terminal Domain In Complex With 4-Chloro-6- 2e-59
2yjw_A209 Tricyclic Series Of Hsp90 Inhibitors Length = 209 2e-59
1osf_A215 Human Hsp90 In Complex With 17-desmethoxy-17-n,n- D 2e-59
3tuh_A209 Crystal Structure Of The N-Terminal Domain Of An Hs 2e-59
2qfo_A207 Hsp90 Complexed With A143571 And A516383 Length = 2 2e-59
1byq_A228 Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 22 3e-59
2qf6_A207 Hsp90 Complexed With A56322 Length = 207 4e-59
1yc1_A264 Crystal Structures Of Human Hsp90alpha Complexed Wi 4e-59
2k5b_A210 Human Cdc37-Hsp90 Docking Model Based On Nmr Length 4e-59
2yee_A252 Hsp90 Inhibitors And Drugs From Fragment And Virtua 7e-59
2xcm_A214 Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord 7e-59
1ah8_A220 Structure Of The Orthorhombic Form Of The N-Termina 8e-59
1a4h_A230 Structure Of The N-Terminal Domain Of The Yeast Hsp 8e-59
1us7_A214 Complex Of Hsp90 And P50 Length = 214 9e-59
2bre_A219 Structure Of A Hsp90 Inhibitor Bound To The N-Termi 9e-59
1zw9_A240 Yeast Hsp82 In Complex With The Novel Hsp90 Inhibit 1e-58
1bgq_A225 Radicicol Bound To The Atp Binding Site Of The N-Te 1e-58
2cgf_A225 A Radicicol Analogue Bound To The Atp Binding Site 1e-58
2xx2_A214 Macrolactone Inhibitor Bound To Hsp90 N-Term Length 1e-58
1am1_A213 Atp Binding Site In The Hsp90 Molecular Chaperone L 1e-58
2jki_A223 Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Leng 2e-58
2wep_A220 Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp 2e-58
1uym_A220 Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimetho 4e-58
3nmq_A239 Hsp90b N-Terminal Domain In Complex With Ec44, A Py 5e-58
2yge_A220 E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel 7e-58
3c0e_A240 Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 9 8e-58
2ygf_A220 L89v, L93i And V136m Mutant Of N-term Hsp90 Complex 1e-57
2yga_A220 E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel 2e-57
3h80_A231 Crystal Structure Of The Amino-Terminal Domain Of H 3e-57
1y6z_A263 Middle Domain Of Plasmodium Falciparum Putative Hea 1e-54
4gqt_A227 N-Terminal Domain Of C. Elegans Hsp90 Length = 227 2e-54
3opd_A231 Crystal Structure Of The N-Terminal Domain Of An Hs 2e-54
3o6o_A214 Crystal Structure Of The N-Terminal Domain Of An Hs 2e-54
2akp_A186 Hsp90 Delta24-n210 Mutant Length = 186 4e-49
3ied_A272 Crystal Structure Of N-Terminal Domain Of Plasmodiu 3e-42
2ior_A235 Crystal Structure Of The N-Terminal Domain Of Htpg, 5e-41
1sf8_A126 Crystal Structure Of The Carboxy-terminal Domain Of 1e-04
>pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 Back     alignment and structure 
Iteration: 1

 Score =  422 bits (1084), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/442 (48%), Positives = 293/442 (66%), Gaps = 32/442 (7%)
Query: 345 LLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPK 404
           L+ND+K IW R  KEV ++EY  FY S  K+  D  P+A+ HF AEG+V FK++LFVP  
Sbjct: 247 LMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDD--PMAYIHFTAEGEVTFKSILFVPTS 304
Query: 405 APHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQ 464
           AP  L++ Y +     +KLYVRRVFI+D+F +++PKYLNF+KG+VDSD LPLNVSRE LQ
Sbjct: 305 APRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQ 364
Query: 465 QHSSLKTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFG 524
           QH  LK I+KKL+RK LDMI+KIA+E              K++D          FW EFG
Sbjct: 365 QHKLLKVIRKKLVRKTLDMIKKIADE--------------KYND---------TFWKEFG 401
Query: 525 KSIKLGIIEDAANRNRLAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQL 584
            +IKLG+IED +NR RLAKLLRF+S+     +TSLDQY+ RMK  Q  I+++ G+++++ 
Sbjct: 402 TNIKLGVIEDHSNRTRLAKLLRFQSSHHPSDITSLDQYVERMKEKQDKIYFMAGSSRKEA 461
Query: 585 EKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDTKDKELKE 644
           E SPF+ERL KK YEVI+ T+PVDEY +Q L +++ K+FQNV+KEG+K  +  K KE +E
Sbjct: 462 ESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESRE 521
Query: 645 S----FKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQS---QT 697
           +    F+ L  W K     + ++   VS RL  +PC +V S+YGWS NMERIM++   QT
Sbjct: 522 AIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQT 581
Query: 698 LSDASKQAYMRGKRVLEINPRHPIIKELRERVVKDPEDAGVQQTAQLIYQTALMESGFSL 757
             D S   Y   K+  EINPRHP+IK++  RV +D +D  V   A ++++TA + SG+ L
Sbjct: 582 GKDISTNYYASQKKTFEINPRHPLIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLL 641
Query: 758 NDPKDFASRIYSTVKSSLNISP 779
            D K +  RI   ++ SLNI P
Sbjct: 642 PDTKAYGDRIERMLRLSLNIDP 663
>pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94 Length = 450 Back     alignment and structure
>pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 Back     alignment and structure
>pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 Back     alignment and structure
>pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 Back     alignment and structure
>pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 Back     alignment and structure
>pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506 Back     alignment and structure
>pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624 Back     alignment and structure
>pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta Refined At 2.3 A Resolution Length = 268 Back     alignment and structure
>pdb|1HK7|A Chain A, Middle Domain Of Hsp90 Length = 288 Back     alignment and structure
>pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 Back     alignment and structure
>pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 Back     alignment and structure
>pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559 Back     alignment and structure
>pdb|3PEH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Plasmodium Falciparum, Pfl1070c In The Presence Of A Thienopyrimidine Derivative Length = 281 Back     alignment and structure
>pdb|1U0Y|A Chain A, N-Domain Of Grp94, With The Charged Domain, In Complex With The Novel Ligand N-Propyl Carboxyamido Adenosine Length = 273 Back     alignment and structure
>pdb|1U2O|A Chain A, Crystal Structure Of The N-Domain Of Grp94 Lacking The Charged Domain In Complex With Neca Length = 236 Back     alignment and structure
>pdb|1QY5|A Chain A, Crystal Structure Of The N-Domain Of The Er Hsp90 Chaperone Grp94 In Complex With The Specific Ligand Neca Length = 269 Back     alignment and structure
>pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E. Coli Hsp90 Length = 303 Back     alignment and structure
>pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment Length = 249 Back     alignment and structure
>pdb|2XJJ|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 Back     alignment and structure
>pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 Back     alignment and structure
>pdb|1UYI|A Chain A, Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9- Pent-9h-Purin-6-Ylamine Length = 236 Back     alignment and structure
>pdb|3K60|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf07_0029) Bound To Adp Length = 223 Back     alignment and structure
>pdb|2ESA|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin: Effects Of Mutants 168- 169 Ks-Aa Length = 236 Back     alignment and structure
>pdb|1UY6|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine Length = 236 Back     alignment and structure
>pdb|3QDD|A Chain A, Hsp90a N-Terminal Domain In Complex With Biib021 Length = 237 Back     alignment and structure
>pdb|2BSM|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular Chaperone Hsp90 Discovered Through Structure-Based Design Length = 235 Back     alignment and structure
>pdb|3HHU|A Chain A, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3- (2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo- 1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid Ethyl Ester {zk 2819} Length = 224 Back     alignment and structure
>pdb|3D0B|A Chain A, Crystal Structure Of Benzamide Tetrahydro-4h-Carbazol-4-One Bound To Hsp90 Length = 232 Back     alignment and structure
>pdb|2YI0|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-4- Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors. Length = 229 Back     alignment and structure
>pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water Soluble Inhibitor Pu-H64 Length = 256 Back     alignment and structure
>pdb|3BM9|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of Chaperone Hsp90 Length = 226 Back     alignment and structure
>pdb|2YE7|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 Back     alignment and structure
>pdb|3INW|A Chain A, Hsp90 N-Terminal Domain With Pochoxime A Length = 228 Back     alignment and structure
>pdb|2XDU|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 236 Back     alignment and structure
>pdb|4EGH|A Chain A, Hsp90-Alpha Atpase Domain In Complex With (4-Hydroxyphenyl)morpholin- 4-Yl Methanone Length = 232 Back     alignment and structure
>pdb|3B24|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Aminotriazine Fragment Molecule Length = 229 Back     alignment and structure
>pdb|4AWO|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived Inhibitors Length = 230 Back     alignment and structure
>pdb|2CCS|A Chain A, Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3- Yl)-Benzene-1,2-Diol Length = 236 Back     alignment and structure
>pdb|3R4M|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock Protein 90. Identification Of Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4- Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2- Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3, 4-D]pyrimidine-6-Carboxamide Length = 228 Back     alignment and structure
>pdb|2JJC|A Chain A, Hsp90 Alpha Atpase Domain With Bound Small Molecule Fragment Length = 218 Back     alignment and structure
>pdb|4EEH|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor 3-(4- Hydroxy-Phenyl)-1h-Indazol-6-Ol Length = 229 Back     alignment and structure
>pdb|3K98|A Chain A, Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-Chloro-2, 4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide Length = 232 Back     alignment and structure
>pdb|3EKO|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 Molecular Chaperone Length = 226 Back     alignment and structure
>pdb|2YE2|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 Back     alignment and structure
>pdb|3K97|A Chain A, Hsp90 N-Terminal Domain In Complex With 4-Chloro-6-{[(2r)-2- (2-Methylphenyl)pyrrolidin-1-Yl]carbonyl}benzene-1, 3-Diol Length = 251 Back     alignment and structure
>pdb|2YJW|A Chain A, Tricyclic Series Of Hsp90 Inhibitors Length = 209 Back     alignment and structure
>pdb|1OSF|A Chain A, Human Hsp90 In Complex With 17-desmethoxy-17-n,n- Dimethylaminoethylamino-geldanamycin Length = 215 Back     alignment and structure
>pdb|3TUH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In The Presence Of An The Inhibitor Ganetespib Length = 209 Back     alignment and structure
>pdb|2QFO|A Chain A, Hsp90 Complexed With A143571 And A516383 Length = 207 Back     alignment and structure
>pdb|1BYQ|A Chain A, Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 228 Back     alignment and structure
>pdb|2QF6|A Chain A, Hsp90 Complexed With A56322 Length = 207 Back     alignment and structure
>pdb|1YC1|A Chain A, Crystal Structures Of Human Hsp90alpha Complexed With Dihydroxyphenylpyrazoles Length = 264 Back     alignment and structure
>pdb|2K5B|A Chain A, Human Cdc37-Hsp90 Docking Model Based On Nmr Length = 210 Back     alignment and structure
>pdb|2YEE|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 Back     alignment and structure
>pdb|2XCM|A Chain A, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2 Domain Length = 214 Back     alignment and structure
>pdb|1AH8|A Chain A, Structure Of The Orthorhombic Form Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 220 Back     alignment and structure
>pdb|1A4H|A Chain A, Structure Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone In Complex With Geldanamycin Length = 230 Back     alignment and structure
>pdb|1US7|A Chain A, Complex Of Hsp90 And P50 Length = 214 Back     alignment and structure
>pdb|2BRE|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of Yeast Hsp90. Length = 219 Back     alignment and structure
>pdb|1ZW9|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor 8-(6-Bromo- Benzo[1, 3]dioxol-5-Ylsulfanyl)-9-(3-Isopropylamino-Propyl)- Adenine Length = 240 Back     alignment and structure
>pdb|1BGQ|A Chain A, Radicicol Bound To The Atp Binding Site Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 Back     alignment and structure
>pdb|2CGF|A Chain A, A Radicicol Analogue Bound To The Atp Binding Site Of The N- Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 Back     alignment and structure
>pdb|2XX2|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term Length = 214 Back     alignment and structure
>pdb|1AM1|A Chain A, Atp Binding Site In The Hsp90 Molecular Chaperone Length = 213 Back     alignment and structure
>pdb|2JKI|A Chain A, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Length = 223 Back     alignment and structure
>pdb|2WEP|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp Length = 220 Back     alignment and structure
>pdb|1UYM|A Chain A, Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine) Length = 220 Back     alignment and structure
>pdb|3NMQ|A Chain A, Hsp90b N-Terminal Domain In Complex With Ec44, A Pyrrolo-Pyrimidine Methoxypyridine Inhibitor Length = 239 Back     alignment and structure
>pdb|2YGE|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 Back     alignment and structure
>pdb|3C0E|A Chain A, Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 98-99 Ks- Aa Length = 240 Back     alignment and structure
>pdb|2YGF|A Chain A, L89v, L93i And V136m Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 Back     alignment and structure
>pdb|2YGA|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 Back     alignment and structure
>pdb|3H80|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312:m1-K213 Length = 231 Back     alignment and structure
>pdb|1Y6Z|A Chain A, Middle Domain Of Plasmodium Falciparum Putative Heat Shock Protein Pf14_0417 Length = 263 Back     alignment and structure
>pdb|4GQT|A Chain A, N-Terminal Domain Of C. Elegans Hsp90 Length = 227 Back     alignment and structure
>pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A Benzamide Derivative Length = 231 Back     alignment and structure
>pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of An The Inhibitor Biib021 Length = 214 Back     alignment and structure
>pdb|2AKP|A Chain A, Hsp90 Delta24-n210 Mutant Length = 186 Back     alignment and structure
>pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf14_0417) In Complex With Amppn Length = 272 Back     alignment and structure
>pdb|2IOR|A Chain A, Crystal Structure Of The N-Terminal Domain Of Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 235 Back     alignment and structure
>pdb|1SF8|A Chain A, Crystal Structure Of The Carboxy-terminal Domain Of Htpg, The E. Coli Hsp90 Length = 126 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query818
2cg9_A677 ATP-dependent molecular chaperone HSP82; chaperone 0.0
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 0.0
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 0.0
1y4s_A559 Chaperone protein HTPG; HSP90, molecular chaperone 0.0
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 0.0
3q6m_A448 Heat shock protein HSP 90-alpha; three domains, tr 0.0
2cge_A405 ATP-dependent molecular chaperone HSP82; chaperone 0.0
3pry_A268 Heat shock protein HSP 90-beta; structural genomic 1e-140
3peh_A281 Endoplasmin homolog; structural genomics, structur 1e-139
3peh_A281 Endoplasmin homolog; structural genomics, structur 7e-06
1qy5_A269 Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N 1e-138
1hk7_A288 Heat shock protein HSP82; ATPase, chaperone; 2.5A 1e-138
1y6z_A263 Heat shock protein, putative; chaperone, structura 1e-138
2gq0_A303 Chaperone protein HTPG; molecular chaperone, HSP90 1e-137
1usu_A260 Heat shock protein HSP82; chaperone/complex, chape 1e-136
2wer_A220 ATP-dependent molecular chaperone HSP82; ATPase, A 1e-132
3o0i_A256 HSP90AA1 protein; HSP90 heat-shock proteins, chape 1e-130
1yc1_A264 HSP 86, heat shock protein HSP 90-alpha; cell-cycl 1e-130
3t0h_A228 Heat shock protein HSP 90-alpha; chaperone, ATPase 1e-128
2gqp_A236 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 1e-128
3nmq_A239 Heat shock protein HSP 90-beta; ATPase, chaperone- 1e-127
2ior_A235 Chaperone protein HTPG; heat shock protein, HSP90; 1e-122
3ied_A272 Heat shock protein; HSP90, chaperone, structural g 1e-100
1sf8_A126 Chaperone protein HTPG; four helix bundle dimeriza 7e-39
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-07
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 Back     alignment and structure
 Score =  910 bits (2354), Expect = 0.0
 Identities = 343/705 (48%), Positives = 491/705 (69%), Gaps = 33/705 (4%)

Query: 76  NAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDN 135
            +E FEFQAE+++LM +IIN++YSNK+IFLRELISNASDALDKIR+ SL+D + L    +
Sbjct: 2   ASETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPD 61

Query: 136 TKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQ 195
             L I+I    E+K+L IRD GIGMTK +LI NLGTIAKSGT AF+E +    D+++IGQ
Sbjct: 62  --LFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQ 119

Query: 196 FGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIRLHLRD 255
           FGVGFYS++LVAD V+VISK NDD+QY+WES A G+F ++ D  NE +GRGT +RL L+D
Sbjct: 120 FGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKD 179

Query: 256 EAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDSSDEEEKAEKEEETEK 315
           +  EYLEE ++KE++K++SEF+ +PI +  +KEV+ +VP  E++  DEE+K E++++ + 
Sbjct: 180 DQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDEDD 239

Query: 316 SESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKD 375
            + + E+ DE+ EKKPKTK VKE   E E LN  K +W RNP ++T+EEY  FY S+  D
Sbjct: 240 KKPKLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISND 299

Query: 376 FSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFD 435
           + D  PL   HF+ EG +EF+A+LF+P +AP DL+ES    N  N+KLYVRRVFI+DE +
Sbjct: 300 WED--PLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKN--NIKLYVRRVFITDEAE 355

Query: 436 ELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEEDPDES 495
           +L+P++L+F+KG+VDS+ LPLN+SREMLQQ+  +K I+K +++K ++   +IAE+     
Sbjct: 356 DLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQ-- 413

Query: 496 TGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTKSDGK 555
                               + KF++ F K+IKLG+ ED  NR  LAKLLR+ STKS  +
Sbjct: 414 --------------------FEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDE 453

Query: 556 LTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYL 615
           LTSL  Y++RM   QK+I+YITG + + +EKSPFL+ LK KN+EV+F TDP+DEY    L
Sbjct: 454 LTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQL 513

Query: 616 MDYEDKKFQNVSKEGLKLGKD---TKDKELKESFKELTKWWKGALASENVDDVKVSNRLD 672
            ++E K   +++K+      D    + ++  + ++ LTK  K  L  + V+ V VS +L 
Sbjct: 514 KEFEGKTLVDITKDFELEETDEEKAEREKEIKEYEPLTKALKEIL-GDQVEKVVVSYKLL 572

Query: 673 NTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVK- 731
           + P  + T ++GWSANMERIM++Q L D+S  +YM  K+  EI+P+ PIIKEL++RV + 
Sbjct: 573 DAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEG 632

Query: 732 DPEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLN 776
             +D  V+   +L+Y+TAL+ SGFSL++P  FASRI   +   LN
Sbjct: 633 GAQDKTVKDLTKLLYETALLTSGFSLDEPTSFASRINRLISLGLN 677
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 Back     alignment and structure
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 Back     alignment and structure
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 Back     alignment and structure
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 Back     alignment and structure
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} Length = 268 Back     alignment and structure
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Length = 281 Back     alignment and structure
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Length = 281 Back     alignment and structure
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Length = 269 Back     alignment and structure
>1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Length = 288 Back     alignment and structure
>1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Length = 263 Back     alignment and structure
>2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Length = 303 Back     alignment and structure
>1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Length = 260 Back     alignment and structure
>2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Length = 220 Back     alignment and structure
>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Length = 256 Back     alignment and structure
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Length = 264 Back     alignment and structure
>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Length = 228 Back     alignment and structure
>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Length = 236 Back     alignment and structure
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} Length = 239 Back     alignment and structure
>2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} Length = 235 Back     alignment and structure
>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} Length = 272 Back     alignment and structure
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Length = 126 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query818
2cg9_A677 ATP-dependent molecular chaperone HSP82; chaperone 100.0
2o1u_A666 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 100.0
2ioq_A624 Chaperone protein HTPG; heat shock protein, HSP90; 100.0
1y4s_A559 Chaperone protein HTPG; HSP90, molecular chaperone 100.0
3q6m_A448 Heat shock protein HSP 90-alpha; three domains, tr 100.0
3hjc_A444 Heat shock protein 83-1; sleeping sickness, struct 100.0
2cge_A405 ATP-dependent molecular chaperone HSP82; chaperone 100.0
1hk7_A288 Heat shock protein HSP82; ATPase, chaperone; 2.5A 100.0
2gq0_A303 Chaperone protein HTPG; molecular chaperone, HSP90 100.0
3pry_A268 Heat shock protein HSP 90-beta; structural genomic 100.0
1usu_A260 Heat shock protein HSP82; chaperone/complex, chape 100.0
1y6z_A263 Heat shock protein, putative; chaperone, structura 100.0
3peh_A281 Endoplasmin homolog; structural genomics, structur 100.0
1qy5_A269 Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N 100.0
3ied_A272 Heat shock protein; HSP90, chaperone, structural g 100.0
3nmq_A239 Heat shock protein HSP 90-beta; ATPase, chaperone- 100.0
3o0i_A256 HSP90AA1 protein; HSP90 heat-shock proteins, chape 100.0
3t0h_A228 Heat shock protein HSP 90-alpha; chaperone, ATPase 100.0
2gqp_A236 Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, 100.0
2wer_A220 ATP-dependent molecular chaperone HSP82; ATPase, A 100.0
1yc1_A264 HSP 86, heat shock protein HSP 90-alpha; cell-cycl 100.0
2ior_A235 Chaperone protein HTPG; heat shock protein, HSP90; 100.0
1sf8_A126 Chaperone protein HTPG; four helix bundle dimeriza 100.0
1b63_A333 MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A 99.7
1h7s_A365 PMS1 protein homolog 2; DNA repair, GHL ATPase, mi 99.49
3h4l_A367 DNA mismatch repair protein PMS1; ATP binding, DNA 99.41
3na3_A348 DNA mismatch repair protein MLH1; MUTL protein hom 99.28
3fv5_A201 DNA topoisomerase 4 subunit B; topoisomerase IV B 98.86
1mu5_A471 Type II DNA topoisomerase VI subunit B; GHKL ATPas 98.84
2zbk_B530 Type 2 DNA topoisomerase 6 subunit B; DNA binding 98.76
1kij_A390 DNA gyrase subunit B; topoisomerase, gyrase B-coum 98.7
1s16_A390 Topoisomerase IV subunit B; two-domain protein com 98.54
2q2e_B621 Type 2 DNA topoisomerase 6 subunit B; DNA-binding, 98.53
1ei1_A391 DNA gyrase B, GYRB; ATPase domain, dimer, isomeras 98.39
4duh_A220 DNA gyrase subunit B; structure-based drug design, 98.34
1zxm_A400 TOPO IIA ATPase, DNA topoisomerase II, alpha isozy 98.31
3cwv_A369 DNA gyrase, B subunit, truncated; structural genom 98.3
4emv_A226 DNA topoisomerase IV, B subunit; protein-inhibitor 98.27
3lnu_A408 Topoisomerase IV subunit B; PARE, ATP-binding, nuc 97.96
3ttz_A198 DNA gyrase subunit B; protein-inhibitor complex, A 97.81
1pvg_A418 DNA topoisomerase II; GHKL ATPase domain; HET: DNA 97.55
1th8_A145 Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-s 97.13
4ew8_A268 Sensor protein DIVL; signal transduction, two-comp 97.13
1i58_A189 Chemotaxis protein CHEA; beta-alpha sandwich, sign 97.06
1id0_A152 PHOQ histidine kinase; PHOQ/PHOP, signal transduct 97.04
1ysr_A150 Sensor-type histidine kinase PRRB; ATP-binding dom 97.02
3d36_A244 Sporulation kinase B; GHKL ATPase, four helix bund 97.02
2btz_A394 Pyruvate dehydrogenase kinase isoenzyme 2; GHKL mo 97.02
3jz3_A222 Sensor protein QSEC; helix-turn-helix, kinase doma 96.97
2e0a_A394 Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP 96.91
2q8g_A407 [pyruvate dehydrogenase [lipoamide]] kinase isozy; 96.91
3ehh_A218 Sensor kinase (YOCF protein); four-helix bundle, G 96.87
1y8o_A419 [pyruvate dehydrogenase [lipoamide]] kinase isozy; 96.78
3sl2_A177 Sensor histidine kinase YYCG; ATP binding, intact 96.77
1gkz_A388 [3-methyl-2-oxobutanoate dehydrogenase [lipoamide] 96.59
1b3q_A379 Protein (chemotaxis protein CHEA); histine kinase, 96.48
1bxd_A161 ENVZ(290-450), protein (osmolarity sensor protein 96.44
1r62_A160 Nitrogen regulation protein NR(II); PII, histidine 96.35
3a0y_A152 Sensor protein; ATP-LID, kinase, phosphoprotein, t 96.31
4gfh_A 1177 DNA topoisomerase 2; topoisomerase, protein-DNA co 96.24
2c2a_A258 Sensor histidine kinase; phosphotransfer, PHOQ, se 95.71
3ehg_A128 Sensor kinase (YOCF protein); GHL ATPase domain, t 95.33
3zxq_A124 Hypoxia sensor histidine kinase response regulato; 94.48
3zxo_A129 Redox sensor histidine kinase response regulator; 93.95
3a0r_A349 Sensor protein; four helix bundle, PAS fold, kinas 93.73
4fpp_A247 Phosphotransferase; four helix bundle, bergerat fo 84.3
>2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=100.00  E-value=2.5e-173  Score=1503.96  Aligned_cols=669  Identities=52%  Similarity=0.877  Sum_probs=571.9

Q ss_pred             ccccchhhhHHHHHHHHHHcCCCCchhHHHHhhhcHHHHHHHHHHhhccCccccCCCCCCccEEEEEEeCCCcEEEEEeC
Q 003458           77 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDR  156 (818)
Q Consensus        77 ~e~~~Fqaev~~ll~ll~~sLYs~~~ifLRELIqNA~DA~~k~r~~~l~~~~~~g~~~~~~~~I~I~~d~~~~~L~I~DN  156 (818)
                      .++|.||||+++||+||+++||||+++|||||||||+||++|+||+++++++++  ....++.|+|.+++++++|+|+||
T Consensus         3 ~e~~~Fqae~~~Ll~li~~sLYsnkeifLRELIsNA~DA~~k~r~~~ltd~~~~--~~~~~~~I~I~~d~~~~~I~I~Dn   80 (677)
T 2cg9_A            3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQL--ETEPDLFIRITPKPEQKVLEIRDS   80 (677)
T ss_dssp             CEEEECCCCHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHTSSCTTTT--TTCCCCCEEEEEEGGGTEEEEEEC
T ss_pred             ccceehhhhHHHHHHHHHHhCCCCchHHHHHHhhCHHHHHHHHHHHhccChhhc--cCCCCcEEEEEEeCCCCEEEEEEC
Confidence            478999999999999999999999999999999999999999999999999877  566778999999998999999999


Q ss_pred             CCCCCHHHHHHHHHHHhccCchhHHHhhhhcCCCCccccccccceeeeeeccEEEEEEeeCCCeeEEEEEcCCCceEEEe
Q 003458          157 GIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISE  236 (818)
Q Consensus       157 GiGMT~~dL~~~LgtIa~Sg~~~f~~~l~~~~~~~~IGqFGIGF~S~F~VadkV~V~Sk~~~d~~~~W~s~~~~~f~i~~  236 (818)
                      |+|||++||.++|++||+||++.|+++++.+.+...||||||||||+||||++|+|+||++++.++.|+++|++.|+|.+
T Consensus        81 GiGMt~edl~~~l~tIA~Sgt~~f~~kl~~~~d~~~IGqFGvGFySaf~vadkV~V~Sk~~~~~~~~W~s~g~~~~ti~~  160 (677)
T 2cg9_A           81 GIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTL  160 (677)
T ss_dssp             SCCCCHHHHHGGGSSSSSCTTHHHHSCCCSSCCCCCCCCTTCTTGGGGGTEEEEEEEEECTTSCEEEEEECSSSEEEEEE
T ss_pred             CCCCCHHHHHHHHHhHhccccHHHHHhhhcccchhhcCCCCchhHHHhhcCcEEEEEEccCCCceEEEEEcCCceEEEee
Confidence            99999999999999999999999998887556778999999999999999999999999998789999999999999998


Q ss_pred             CCCCCCCCCCcEEEEEecccccccccHHHHHHHHHHhcCCCCcceEEeecccccccCCCCCCCCchhHHHh-hhhhhhhc
Q 003458          237 DTWNEPLGRGTEIRLHLRDEAGEYLEESKLKELVKKYSEFINFPIYIWASKEVDVDVPTDEDDSSDEEEKA-EKEEETEK  315 (818)
Q Consensus       237 ~~~~~~~~~GT~I~L~Lk~~~~e~l~~~~l~~lv~kys~fi~~PI~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  315 (818)
                      ++.+...++||+|+|||++++.+||+.++|+++|++||+||+|||+++..++.+.+++++++++++.++.. ++++.+++
T Consensus       161 ~~~~~~~~~GT~I~L~Lk~d~~e~l~~~~i~~lvkkys~fi~~PI~l~~~k~~~~~~~~~e~~~~~~~~~~e~~~~~~~~  240 (677)
T 2cg9_A          161 DEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDEDDK  240 (677)
T ss_dssp             CCSSCCCSSEEEEEEEECTTGGGGGCHHHHHHHHHHHSTTCSSCEEECCCCCCCCC------------------------
T ss_pred             cCCCCCCCCCeEEEEEEcchhhccccHHHHHHHHHHHHhhCCCCeEEeeccccccCcCcchhhhcccccccccccccccc
Confidence            64345678999999999999999999999999999999999999999876665544433221100000000 00000001


Q ss_pred             ccCCCCccccccccCCCcccceecccceeeccccCcccccCCCCCCHHHHHHHHHhhhcCCCCCCCceeeeeecccceee
Q 003458          316 SESESEDEDEDSEKKPKTKTVKETTFEWELLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEF  395 (818)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~e~iN~~~piW~r~~~ev~~eey~~Fyk~~~~~~~~~~PL~~~hf~~eg~~~f  395 (818)
                      +.+. +++++++++++++|++++++++|+.||+++|||+|+|++||+|||.+|||+++++|  ++||+|+||++||+++|
T Consensus       241 ~~~~-~~~~~~~~~~~~~k~~~~~~~e~e~iN~~~plW~r~~~eit~eeY~~FYk~l~~d~--~~pl~~~H~~veg~~~~  317 (677)
T 2cg9_A          241 KPKL-EEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDW--EDPLYVKHFSVEGQLEF  317 (677)
T ss_dssp             ----------------------CCCCCBCCCCCCCCTTSSCGGGCCTTTHHHHHHHHTTCC--SCCSEEEEEEECSSSCE
T ss_pred             cccc-ccccchhhhcccccccccccccceecccCCCCcccCcccCCHHHHHHHHHHhcCCC--CCchheEEecccccceE
Confidence            1111 11111111345677888888999999999999999999999999999999999999  99999999999999999


Q ss_pred             EEEEEecCCCCcchhhhhhcccccceEEEeeccccccchhhhhHhhhhcccceecCCCCCCccchhhhccchHHHHHHHH
Q 003458          396 KAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKK  475 (818)
Q Consensus       396 ~~llfiP~~~p~~~~~~~~~~~~~~ikLYvrrVfI~d~~~~llP~yl~Fv~GVVDS~dLpLNvSRE~lQ~~~~l~~I~k~  475 (818)
                      +||||||+++|+|+|++  ...+++|+||||||||+|+|++|||+||+||||||||+|||||||||+||+|++|++||+.
T Consensus       318 ~~lLyiP~~ap~d~~~~--~~~~~~ikLYv~rVfI~d~~~~llP~yL~FvkGVVDS~DLpLNvSRE~LQ~~~~lk~I~~~  395 (677)
T 2cg9_A          318 RAILFIPKRAPFDLFES--KKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKN  395 (677)
T ss_dssp             EEEEEECSSCCC-----------CCSEEEETTEEEEECSTTTSCGGGTTCEEEEEESSCCCCBTTTBCCCHHHHHHHHHH
T ss_pred             EEEEEEcCCCchhhhhh--hhccCCeEEEEeeeEeecChhhhchHHHHHheeecccCCCCcccCHHHhccCHHHHHHHHH
Confidence            99999999999999974  2457899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCcCCCCcccccccCCCcchhhHHHHHHHHHhHHhhhhcccCHHhHHHHhccccceecCCCCc
Q 003458          476 LIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTKSDGK  555 (818)
Q Consensus       476 l~~k~l~~l~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~f~~~f~~~iK~G~~eD~~nr~~lakLLrF~ss~~~~~  555 (818)
                      |++|++++|.+||++                      +++|.+||++||++||+|+++|..||++|++||||+||+++++
T Consensus       396 l~kkvl~~l~~la~~----------------------~e~y~~f~~~fg~~lK~G~~eD~~nr~~l~~llrf~ss~~~~~  453 (677)
T 2cg9_A          396 IVKKLIEAFNEIAED----------------------SEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDE  453 (677)
T ss_dssp             HHHHHHHHHHHHHSC----------------------SHHHHHHHHHHHHHHHHHHHHCSSSHHHHHTTCCBEESSCTTS
T ss_pred             HHHHHHHHHHHHHhC----------------------HHHHHHHHHHHhHHhhhhhccCHHHHHHHHhheEeeecCCCCc
Confidence            999999999999976                      4699999999999999999999999999999999999997778


Q ss_pred             ccCHHHHHhhccCCCceEEEEeCCCHHHHhcChhHHHHHhcCCeEEecCCCchHHHHHhhhhcCCCceEeeccccccCCC
Q 003458          556 LTSLDQYISRMKAGQKDIFYITGANKEQLEKSPFLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGK  635 (818)
Q Consensus       556 ~~SL~eYv~rmke~Qk~IYY~tg~s~~~~~~SP~lE~~~~kG~EVL~ltdpiDE~~i~~L~ef~gkkf~~V~k~~~~l~~  635 (818)
                      ++||++||+|||++|+.|||+||+|++++++|||+|.|++||||||||++||||||||+|.+|+|++|++|+++ ++|++
T Consensus       454 ~~sL~eYv~rmke~Q~~IyY~t~~s~~~~~~sp~~E~~~~kg~EVl~l~~~iDe~~~~~l~e~~gk~~~~v~k~-l~l~~  532 (677)
T 2cg9_A          454 LTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD-FELEE  532 (677)
T ss_dssp             CBCSTTHHHHSCTTCCEEEEEECSCSTTTTTCGGGHHHHTTTCCEEEECSHHHHHHHGGGSCBTTBEEECSCCC-CCSCS
T ss_pred             eeeHHHHHHhccccCceEEEEeCCCHHHHHhCcHHHHHHhCCceEEEeCCchHHHHHHHHHHhCCceEEEeecc-ccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999 98874


Q ss_pred             Cc--ch--HHHHHHHHHHHHHHHhhcCCCCccEEEEeeccCCCCeEEEecCCcchHHHHHHHHHhccccchhhhhccccc
Q 003458          636 DT--KD--KELKESFKELTKWWKGALASENVDDVKVSNRLDNTPCVVVTSKYGWSANMERIMQSQTLSDASKQAYMRGKR  711 (818)
Q Consensus       636 ~e--k~--~~~~~~~~~L~~~lK~~L~~~~V~~V~vS~RL~~sP~~lv~~~~g~s~~MeRimkaqa~~d~~~~~~~~~kk  711 (818)
                      ++  ++  ++.+++|++|++|||++|+++ |.+|++|+||++||||||++++|||++|+|||++|+++++.+..++..++
T Consensus       533 ~e~~~~~~~~~~~~~~~L~~~~k~~L~~~-v~~V~~s~rl~~sP~~lv~~~~~~s~~merimka~~~~d~~~~~~~~~k~  611 (677)
T 2cg9_A          533 TDEEKAEREKEIKEYEPLTKALKEILGDQ-VEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKK  611 (677)
T ss_dssp             STTSSTTHHHHHGGGHHHHHHHHHTTCSS-CSCEECCSSCSSSCEEEECCTTSCCHHHHHHHTTCC-------------C
T ss_pred             chhhhhhhhhhHHHHHHHHHHHHHhcCCc-ceEEEEeccCCCCCEEEEeCcccccHHHHHHHHHhhccccccccccccCc
Confidence            33  32  556789999999999999999 99999999999999999999999999999999999876655456778899


Q ss_pred             ceeeCCCChHHHHHHHhhccC-CCchhHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhhcC
Q 003458          712 VLEINPRHPIIKELRERVVKD-PEDAGVQQTAQLIYQTALMESGFSLNDPKDFASRIYSTVKSSLN  776 (818)
Q Consensus       712 iLEINp~HPlIk~L~~~~~~d-~~d~~~~~~a~~Lyd~AlL~sG~~l~D~~~fa~ri~~ll~~~l~  776 (818)
                      +|||||+||||++|+.+...+ ++++.++++|++|||+|+|++|+.++||+.|++||++||.++||
T Consensus       612 ~LeiNp~hpli~~L~~~~~~d~~~~~~~~~~~~~Lyd~All~~G~~l~dp~~f~~ri~~ll~~~l~  677 (677)
T 2cg9_A          612 TFEISPKSPIIKELKKRVDEGGAQDKTVKDLTKLLYETALLTSGFSLDEPTSFASRINRLISLGLN  677 (677)
T ss_dssp             EEEECTTCHHHHHHHHHHHTCCSSCSSSSTTHHHHHHHHHHHTTCCCSSTTHHHHHHHHTSSSSCC
T ss_pred             eEEEcCCCHHHHHHHHhhhccccCHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHhcC
Confidence            999999999999999877655 56678999999999999999999999999999999999987775
>2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Back     alignment and structure
>2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Back     alignment and structure
>1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Back     alignment and structure
>3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Back     alignment and structure
>3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Back     alignment and structure
>2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Back     alignment and structure
>1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Back     alignment and structure
>2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Back     alignment and structure
>3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8 Back     alignment and structure
>1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Back     alignment and structure
>1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Back     alignment and structure
>3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Back     alignment and structure
>1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Back     alignment and structure
>3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} Back     alignment and structure
>3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1 Back     alignment and structure
>3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Back     alignment and structure
>3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Back     alignment and structure
>2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Back     alignment and structure
>2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Back     alignment and structure
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Back     alignment and structure
>2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} Back     alignment and structure
>1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Back     alignment and structure
>1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A* Back     alignment and structure
>1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A* Back     alignment and structure
>3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae} Back     alignment and structure
>3na3_A DNA mismatch repair protein MLH1; MUTL protein homolog 1, DNA damag repair, structural genomics consortium, SGC, protein bindin; HET: DNA ATP; 2.50A {Homo sapiens} Back     alignment and structure
>3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A* Back     alignment and structure
>1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A* Back     alignment and structure
>2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae} Back     alignment and structure
>1kij_A DNA gyrase subunit B; topoisomerase, gyrase B-coumarin complex, isomerase; HET: DNA NOV; 2.30A {Thermus thermophilus} SCOP: d.14.1.3 d.122.1.2 Back     alignment and structure
>1s16_A Topoisomerase IV subunit B; two-domain protein complexed with ADPNP; HET: ANP; 2.10A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 Back     alignment and structure
>2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei} Back     alignment and structure
>1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 Back     alignment and structure
>4duh_A DNA gyrase subunit B; structure-based drug design, antibacterial, DNA gyrase B, GY isomerase-isomerase inhibitor complex; HET: DNA RLI; 1.50A {Escherichia coli} PDB: 1aj6_A* 1kzn_A* 3g7e_A* Back     alignment and structure
>1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A* Back     alignment and structure
>3cwv_A DNA gyrase, B subunit, truncated; structural genomics, unknown function, B-subunit binding, isomerase, nucleotide-binding, topoisomerase; HET: DNA; 1.95A {Myxococcus xanthus} Back     alignment and structure
>4emv_A DNA topoisomerase IV, B subunit; protein-inhibitor complex, ATP binding, structure-based drug antimicrobial, virtual screen; HET: DNA 0R9; 1.70A {Streptococcus pneumoniae GA47373} PDB: 4em7_A* Back     alignment and structure
>3lnu_A Topoisomerase IV subunit B; PARE, ATP-binding, nucleotide-BI topoisomerase; 2.20A {Xanthomonas oryzae PV} PDB: 3lps_A* Back     alignment and structure
>3ttz_A DNA gyrase subunit B; protein-inhibitor complex, ATP-binding, structure-based drug antimicrobial, isomerase-isomerase inhibitor complex; HET: DNA 07N; 1.63A {Staphylococcus aureus} PDB: 3u2d_A* 3u2k_A* 3g75_A* 3g7b_A* Back     alignment and structure
>1pvg_A DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae} SCOP: d.14.1.3 d.122.1.2 PDB: 1qzr_A* Back     alignment and structure
>1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A* Back     alignment and structure
>4ew8_A Sensor protein DIVL; signal transduction, two-component regulatory system, hiska GHKL domain, structural genomics; 2.50A {Caulobacter crescentus} Back     alignment and structure
>1i58_A Chemotaxis protein CHEA; beta-alpha sandwich, signaling protein, transferase; HET: ACP ADP; 1.60A {Thermotoga maritima} SCOP: d.122.1.3 PDB: 1i59_A* 1i5a_A* 1i5b_A* 1i5c_A* 1i5d_A* Back     alignment and structure
>1id0_A PHOQ histidine kinase; PHOQ/PHOP, signal transduction, transferase; HET: ANP; 1.60A {Escherichia coli} SCOP: d.122.1.3 PDB: 3cgz_A 3cgy_A Back     alignment and structure
>1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A Back     alignment and structure
>3d36_A Sporulation kinase B; GHKL ATPase, four helix bundle, class I two-component histidine kinase, phosphoprotein; HET: ADP; 2.03A {Geobacillus stearothermophilus} Back     alignment and structure
>2btz_A Pyruvate dehydrogenase kinase isoenzyme 2; GHKL motif regulation, transferase; 2.2A {Homo sapiens} PDB: 2bu2_A* 2bu5_A* 2bu6_A* 2bu7_A* 2bu8_A* 3crk_A* 1jm6_A* 3crl_A* Back     alignment and structure
>3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli} Back     alignment and structure
>2e0a_A Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP-binding, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: ANP; 1.86A {Homo sapiens} PDB: 2zdx_A* 2zdy_A* 2zkj_A* 3d2r_A* Back     alignment and structure
>2q8g_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; GHKL ATPase/kinase family, pyruvate dehydrogenase complex, mitochondrial kinase; HET: AZX; 1.90A {Homo sapiens} PDB: 2q8f_A* 2q8h_A Back     alignment and structure
>3ehh_A Sensor kinase (YOCF protein); four-helix bundle, GHL ATPase domain, transferase; HET: MSE ADP; 2.10A {Bacillus subtilis} PDB: 3ehj_A* 3gie_A* 3gif_A* 3gig_A* 3ehf_A* Back     alignment and structure
>1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB: 1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A* Back     alignment and structure
>3sl2_A Sensor histidine kinase YYCG; ATP binding, intact ATP, bergerat fold, TR; HET: ATP; 1.61A {Bacillus subtilis} Back     alignment and structure
>1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A* Back     alignment and structure
>1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi-domai protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A* 3ur1_A Back     alignment and structure
>1bxd_A ENVZ(290-450), protein (osmolarity sensor protein (ENVZ)); histidine kinase, osmosensor, His-Asp phosphorelay system, signal transduction; HET: ANP; NMR {Escherichia coli BL21} SCOP: d.122.1.3 Back     alignment and structure
>1r62_A Nitrogen regulation protein NR(II); PII, histidine kinase, two component system, transfera; 1.60A {Escherichia coli} SCOP: d.122.1.3 Back     alignment and structure
>3a0y_A Sensor protein; ATP-LID, kinase, phosphoprotein, transferase, two-component regulatory system; 1.57A {Thermotoga maritima} PDB: 3a0t_A* 3a0x_A 3a0w_A 3a0z_A Back     alignment and structure
>4gfh_A DNA topoisomerase 2; topoisomerase, protein-DNA complex, DNA supercoiling, DNA replication; HET: DNA PTR TSP ANP; 4.41A {Saccharomyces cerevisiae} Back     alignment and structure
>2c2a_A Sensor histidine kinase; phosphotransfer, PHOQ, selenomethionyl MAD, two-component systems, transferase; HET: ADP; 1.9A {Thermotoga maritima} SCOP: a.30.2.1 d.122.1.3 PDB: 3dge_A* Back     alignment and structure
>3ehg_A Sensor kinase (YOCF protein); GHL ATPase domain, transferase; HET: ATP; 1.74A {Bacillus subtilis} Back     alignment and structure
>3zxq_A Hypoxia sensor histidine kinase response regulato; transferase; 1.90A {Mycobacterium tuberculosis} Back     alignment and structure
>3zxo_A Redox sensor histidine kinase response regulator; transferase; HET: MSE; 1.90A {Mycobacterium tuberculosis} Back     alignment and structure
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima} Back     alignment and structure
>4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 818
d1usua_256 d.14.1.8 (A:) Heat shock protein hsp82 {Baker's ye 3e-81
d2iwxa1213 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharo 3e-67
d2gqpa1227 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) 2e-66
d1uyla_208 d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 2e-62
d1sf8a_115 d.271.1.1 (A:) Chaperone protein HtpG {Escherichia 5e-26
d2hkja3219 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {A 0.001
d1h7sa2203 d.122.1.2 (A:29-231) DNA mismatch repair protein P 0.003
>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 256 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Hsp90 middle domain
domain: Heat shock protein hsp82
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  259 bits (662), Expect = 3e-81
 Identities = 131/280 (46%), Positives = 190/280 (67%), Gaps = 26/280 (9%)

Query: 350 KAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDL 409
           K +W RNP ++T+EEY  FY S+  D+  E PL   HF+ EG +EF+A+LF+P +AP DL
Sbjct: 3   KPLWTRNPSDITQEEYNAFYKSISNDW--EDPLYVKHFSVEGQLEFRAILFIPKRAPFDL 60

Query: 410 YESYYNTNKANLKLYVRRVFISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSL 469
           +ES     K N+KLYVRRVFI+DE ++L+P++L+F+KG+VDS+ LPLN+SREMLQQ+  +
Sbjct: 61  FESKKK--KNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIM 118

Query: 470 KTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSDDDDKKGQYTKFWNEFGKSIKL 529
           K I+K +++K ++   +IAE+                         + KF++ F K+IKL
Sbjct: 119 KVIRKNIVKKLIEAFNEIAEDSEQ----------------------FEKFYSAFSKNIKL 156

Query: 530 GIIEDAANRNRLAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSPF 589
           G+ ED  NR  LAKLLR+ STKS  +LTSL  Y++RM   QK+I+YITG + + +EKSPF
Sbjct: 157 GVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPF 216

Query: 590 LERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKE 629
           L+ LK KN+EV+F TDP+DEY    L ++E K   +++K+
Sbjct: 217 LDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD 256
>d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 Back     information, alignment and structure
>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Length = 227 Back     information, alignment and structure
>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Length = 208 Back     information, alignment and structure
>d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} Length = 219 Back     information, alignment and structure
>d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} Length = 203 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query818
d1usua_256 Heat shock protein hsp82 {Baker's yeast (Saccharom 100.0
d2gqpa1227 HSP90 {Dog (Canis familiaris) [TaxId: 9615]} 100.0
d2iwxa1213 HSP90 {Baker's yeast (Saccharomyces cerevisiae) [T 100.0
d1uyla_208 HSP90 {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1sf8a_115 Chaperone protein HtpG {Escherichia coli [TaxId: 5 99.97
d1h7sa2203 DNA mismatch repair protein PMS2 {Human (Homo sapi 99.31
d2hkja3219 Topoisomerase VI-B subunit {Archaeon Sulfolobus sh 99.2
d1b63a2218 DNA mismatch repair protein MutL {Escherichia coli 99.16
d1pvga2239 DNA topoisomerase II {Baker's yeast (Saccharomyces 97.87
d1kija2212 DNA gyrase B {Thermus thermophilus [TaxId: 274]} 97.62
d1ei1a2219 DNA gyrase B {Escherichia coli [TaxId: 562]} 97.45
d1gkza2193 Branched-chain alpha-ketoacid dehydrogenase kinase 97.34
d1y8oa2125 Pyruvate dehydrogenase kinase {Human (Homo sapiens 97.19
d1jm6a2190 Pyruvate dehydrogenase kinase {Rat (Rattus norvegi 97.0
d1ysra1148 Sensor-type histidine kinase PrrB {Mycobacterium t 96.85
d1bxda_161 Histidine kinase domain of the osmosensor EnvZ {Es 96.73
d1th8a_139 Anti-sigma factor spoIIab {Bacillus stearothermoph 96.71
d2c2aa2161 Sensor histidine kinase TM0853 {Thermotoga maritim 96.64
d1id0a_146 Histidine kinase PhoQ domain {Escherichia coli [Ta 96.34
d1ixma_179 Sporulation response regulatory protein Spo0B {Bac 95.31
d1s14a_168 Topoisomerase IV subunit B {Escherichia coli [TaxI 94.64
d1r62a_156 Nitrogen regulation protein NtrB, C-terminal domai 88.21
>d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Hsp90 middle domain
domain: Heat shock protein hsp82
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.3e-84  Score=677.94  Aligned_cols=255  Identities=52%  Similarity=0.943  Sum_probs=238.0

Q ss_pred             cCcccccCCCCCCHHHHHHHHHhhhcCCCCCCCceeeeeecccceeeEEEEEecCCCCcchhhhhhcccccceEEEeecc
Q 003458          349 VKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRV  428 (818)
Q Consensus       349 ~~piW~r~~~ev~~eey~~Fyk~~~~~~~~~~PL~~~hf~~eg~~~f~~llfiP~~~p~~~~~~~~~~~~~~ikLYvrrV  428 (818)
                      .+|||+|+|++||+|||++|||++++++  ++||+|+||++||+++|+||||||+.+|+++|..  ...+++|+||||||
T Consensus         2 tkpiW~r~~~eit~eeY~~FYk~l~~~~--~~Pl~~iH~~~eg~~~~~~lLyiP~~~p~~~~~~--~~~~~~ikLY~~rV   77 (256)
T d1usua_           2 TKPLWTRNPSDITQEEYNAFYKSISNDW--EDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFES--KKKKNNIKLYVRRV   77 (256)
T ss_dssp             CCCGGGSCGGGCCHHHHHHHHHHHHCCS--SCCSEEEEEEECSSSCEEEEEEECSSCCTTTTCC------CCEEEEETTE
T ss_pred             CCCCccCCchhCCHHHHHHHHHhhcCCc--cCCceeEEeeeeeeEEEEEEEEecccCcchhhhh--hhhcCCeEEEEEee
Confidence            5799999999999999999999999999  9999999999999999999999999999999864  24578999999999


Q ss_pred             ccccchhhhhHhhhhcccceecCCCCCCccchhhhccchHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCcccccccCC
Q 003458          429 FISDEFDELLPKYLNFLKGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKIAEEDPDESTGKDKKDVEKFSD  508 (818)
Q Consensus       429 fI~d~~~~llP~yl~Fv~GVVDS~dLpLNvSRE~lQ~~~~l~~I~k~l~~k~l~~l~~la~~~~~~~~~~~~~~~~~~~~  508 (818)
                      ||+|+|++|||+||+||||||||+|||||||||+||+|+++++|++.|++||+++|+++++                   
T Consensus        78 fI~d~~~~llP~~L~FvkGVVDS~DlpLNVSRE~LQ~~~~l~kI~~~i~kkv~~~L~~~~~-------------------  138 (256)
T d1usua_          78 FITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAE-------------------  138 (256)
T ss_dssp             EEESCCTTSSCGGGTTCEEEEEESSCCSCC------CCHHHHHHHHHHHHHHHHHHHHHHT-------------------
T ss_pred             eeccchhhHHHHHHHHhhhccccccCCcccchhhhcccHHHHHHHHHHHHHHHHHHHHhhh-------------------
Confidence            9999999999999999999999999999999999999999999999999999999988764                   


Q ss_pred             CcchhhHHHHHHHHHhHHhhhhcccCHHhHHHHhccccceecCCCCcccCHHHHHhhccCCCceEEEEeCCCHHHHhcCh
Q 003458          509 DDDKKGQYTKFWNEFGKSIKLGIIEDAANRNRLAKLLRFESTKSDGKLTSLDQYISRMKAGQKDIFYITGANKEQLEKSP  588 (818)
Q Consensus       509 ~~~~~~~y~~f~~~f~~~iK~G~~eD~~nr~~lakLLrF~ss~~~~~~~SL~eYv~rmke~Qk~IYY~tg~s~~~~~~SP  588 (818)
                         ++++|.+||++||.+||+||++|.+|++++++||||+||.++++++||++|++||+++|+.|||++|++++++++||
T Consensus       139 ---d~eky~~fw~~fg~~lK~G~~~D~~~~e~l~~ll~f~ss~s~~e~~SL~eYvermke~Qk~IyYi~~~s~~~~~~sP  215 (256)
T d1usua_         139 ---DSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSP  215 (256)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHTTCEEEETTEEEEEEEHHHHHHTSCTTCCEEEEEECSSHHHHHTCT
T ss_pred             ---CHHHHHHHHHHHhHHHhhhccccHHHHHHHHHhhhhhccCCCcceeeHHHHHhhccccccceEEEecCCHHHHHcCH
Confidence               46799999999999999999999999999999999999998789999999999999999999999999999999999


Q ss_pred             hHHHHHhcCCeEEecCCCchHHHHHhhhhcCCCceEeeccc
Q 003458          589 FLERLKKKNYEVIFFTDPVDEYLMQYLMDYEDKKFQNVSKE  629 (818)
Q Consensus       589 ~lE~~~~kG~EVL~ltdpiDE~~i~~L~ef~gkkf~~V~k~  629 (818)
                      |+|.|++||||||||+|||||||||+|.+|+||+|+||+++
T Consensus       216 ~lE~~k~kg~EVL~l~dpiDe~~i~~l~e~~~kkf~sV~ke  256 (256)
T d1usua_         216 FLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD  256 (256)
T ss_dssp             THHHHHHTTCCEEEECSHHHHHHHHHHCEETTEEEEETTCC
T ss_pred             HHHHHHHCCCEEEEecCchHHHHHHHHHHhCCCceeecCCC
Confidence            99999999999999999999999999999999999999875
>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Back     information, alignment and structure
>d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} Back     information, alignment and structure
>d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]} Back     information, alignment and structure
>d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure