Citrus Sinensis ID: 003508
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 814 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SYM4 | 942 | Alpha,alpha-trehalose-pho | yes | no | 0.982 | 0.849 | 0.815 | 0.0 | |
| Q9T079 | 795 | Probable alpha,alpha-treh | no | no | 0.910 | 0.932 | 0.603 | 0.0 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.829 | 0.821 | 0.655 | 0.0 | |
| Q9SHG0 | 783 | Probable alpha,alpha-treh | no | no | 0.904 | 0.939 | 0.584 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.761 | 0.845 | 0.420 | 1e-156 | |
| Q00764 | 495 | Alpha,alpha-trehalose-pho | yes | no | 0.519 | 0.854 | 0.507 | 1e-127 | |
| Q07158 | 488 | Alpha,alpha-trehalose-pho | yes | no | 0.508 | 0.848 | 0.526 | 1e-126 | |
| Q00075 | 517 | Alpha,alpha-trehalose-pho | yes | no | 0.509 | 0.802 | 0.512 | 1e-125 | |
| O74932 | 469 | Alpha,alpha-trehalose-pho | yes | no | 0.509 | 0.884 | 0.515 | 1e-125 | |
| O94213 | 475 | Alpha,alpha-trehalose-pho | N/A | no | 0.508 | 0.871 | 0.515 | 1e-124 |
| >sp|Q9SYM4|TPS1_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1376 bits (3561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 664/814 (81%), Positives = 722/814 (88%), Gaps = 14/814 (1%)
Query: 7 GVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPL 66
GVKEFEARWIGWAGVNVPDE+GQKAL+KALAEKRCIPVFLDE+IVHQYYNGYCNNILWPL
Sbjct: 128 GVKEFEARWIGWAGVNVPDEVGQKALSKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPL 187
Query: 67 FHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 126
FHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWCHDYHLMFLPKCL
Sbjct: 188 FHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCHDYHLMFLPKCL 247
Query: 127 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 186
KEYNS MKVGWFLHTPFPSSEIHRTLPSRS+LLR+VLAADLVGFHTYDYARHFVSACTRI
Sbjct: 248 KEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRI 307
Query: 187 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGV 246
LG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE+ V H+KEL+E FAGRKVMLGV
Sbjct: 308 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERFAGRKVMLGV 367
Query: 247 DRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 306
DRLDMIKGIPQK+LAFEKFLEEN++WR KVVLLQIAVPTRTDVPEYQ+LTSQVHEIVGRI
Sbjct: 368 DRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRI 427
Query: 307 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 366
NGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSYEFVACQ+ KKGV
Sbjct: 428 NGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEAKKGV 487
Query: 367 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQ 426
LILSEFAGAAQSLGAGAILVNPWNITEVA +I +ALNM+ EEREKRH HNF HV THTAQ
Sbjct: 488 LILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRHNFHHVKTHTAQ 547
Query: 427 EWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTP 486
EWAETFVSELNDTV+EAQLRI +VPP L + D+I+RY +SNNRLLILGFNATLTEPVD
Sbjct: 548 EWAETFVSELNDTVIEAQLRISKVPPELPQHDAIQRYSKSNNRLLILGFNATLTEPVDNQ 607
Query: 487 GRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 546
GRRGDQI+EM+L LHP+LK PL ALC DP TTIVVLSGS R+VLDKNF EY++WLAAENG
Sbjct: 608 GRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLDKNFGEYDMWLAAENG 667
Query: 547 MFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEF 606
MFLR T G+WMTTMPEHLNMEWVDS+KHVF+YFTERTPRSHFE R+TSL+WNYKYAD+EF
Sbjct: 668 MFLRLTNGEWMTTMPEHLNMEWVDSVKHVFKYFTERTPRSHFETRDTSLIWNYKYADIEF 727
Query: 607 GRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA 666
GR+QARD+LQHLWTGPISNASV+VVQGS+SVEVRAVGVTKGAAIDRIL EIVHSK M T
Sbjct: 728 GRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTTP 787
Query: 667 IDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRP---TDAIKVPGERRQALK----- 718
IDYVLCIGHFLGKDEDVY FFEPELP D P I R+RP + A G+RR K
Sbjct: 788 IDYVLCIGHFLGKDEDVYTFFEPELPSDMPAIARSRPSSDSGAKSSSGDRRPPSKSTHNN 847
Query: 719 ------VASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYF 772
+S +S + +QR Q+ K NH+ N R+PS +K S+NVLDL ENYF
Sbjct: 848 NKSGSKSSSSSNSNNNNKSSQRSLQSERKSGSNHSLGNSRRPSPEKISWNVLDLKGENYF 907
Query: 773 SCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 806
SCAVGR RTNAR+LL S D+VV FL+KLAD +SS
Sbjct: 908 SCAVGRTRTNARYLLGSPDDVVCFLEKLADTTSS 941
|
Required for normal embryo development, vegetative growth and transition to flowering. Regulates embryo growth, cell wall deposition, starch and sucrose degradation, but not cell differentiation. Involved in the regulation of glucose sensing and signaling genes during plant development. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|Q9T079|TPS4_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4 OS=Arabidopsis thaliana GN=TPS4 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 990 bits (2559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/805 (60%), Positives = 593/805 (73%), Gaps = 64/805 (7%)
Query: 7 GVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPL 66
G+KEFE +WIGW GV+V D IG+K L+ LAEK CIPVFL+E + QYYNGYCNNILWP+
Sbjct: 40 GLKEFETKWIGWPGVDVHDAIGKKTLSITLAEKGCIPVFLEE-VCDQYYNGYCNNILWPI 98
Query: 67 FHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 126
FHYLG P E R T ++QSQ+ AY KANQ+F DVV +HY++GDVVWCHDYH+M LP+ L
Sbjct: 99 FHYLGTPPEYRNDATITYQSQYEAYKKANQIFFDVVKEHYEEGDVVWCHDYHVMLLPQYL 158
Query: 127 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 186
KEYNS MKVGWFLHTPFPSSE+++TLPSRSDLLR+VL ADLVGFHTYD+ARHF++AC I
Sbjct: 159 KEYNSKMKVGWFLHTPFPSSEMYKTLPSRSDLLRSVLTADLVGFHTYDFARHFLNACMCI 218
Query: 187 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGV 246
LG E T EG+ DQG++TRVA FPIGI+ ERFI E++ V ++K+ + F GRK++LGV
Sbjct: 219 LGVEATSEGIVDQGKVTRVAVFPIGIEPERFINTSELSEVVQYMKKFKNDFGGRKLILGV 278
Query: 247 DRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 306
DRLD IKGIPQK AFEKFLEEN++WRGKV+LLQIAVPTR + EYQ++ Q H VGRI
Sbjct: 279 DRLDTIKGIPQKYQAFEKFLEENAEWRGKVMLLQIAVPTRNGIGEYQKIKDQCHYHVGRI 338
Query: 307 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 366
NGRFG++++VPI HLD S+DF LCALYA+TDV LVTSLRDGMNLVS EF+ACQ +KGV
Sbjct: 339 NGRFGSISSVPIIHLDCSIDFNQLCALYAITDVLLVTSLRDGMNLVSSEFIACQKAEKGV 398
Query: 367 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQ 426
LILSEFAGA QSLGAGAILVNPWNI EV++AI ALNMS EE+E++H NF +V TH+ Q
Sbjct: 399 LILSEFAGAGQSLGAGAILVNPWNIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQ 458
Query: 427 EWAETFV---------SELNDTVVEAQLRIKQVPP-SLREADSIERYLRSNNRLLILGFN 476
+WA+ F+ S+L + A+L L E D I++Y +SNNRLLILGF
Sbjct: 459 QWADDFMKLTLTNILCSKLIEITTSAELGAGLAATLELPEHDVIQQYSKSNNRLLILGFY 518
Query: 477 ATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 536
TLT+P+ RRGD M L+LHP LK+ L LC DPKTT+VVLS S++ +LDKNF E
Sbjct: 519 GTLTQPMKNQERRGDG---MNLELHPQLKERLKELCSDPKTTVVVLSRSEKCILDKNFGE 575
Query: 537 YNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV 596
YN+WLAAENGMFLR T+G+W+T +PEH+N+EW+D +KHVF+YFTERTP S+ E E SLV
Sbjct: 576 YNMWLAAENGMFLRHTSGEWVTRIPEHMNLEWIDGVKHVFKYFTERTPGSYLETSEASLV 635
Query: 597 WNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAE 656
WNY+ AD EFGR QARDMLQHLW GPISNASV+VV+G +SVEV AVGVTKG+A++RIL E
Sbjct: 636 WNYENADAEFGRAQARDMLQHLWAGPISNASVDVVRGGQSVEVHAVGVTKGSAMERILGE 695
Query: 657 IVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQA 716
IVH+K M T IDYVLCIG FLGKDEDVY FFEPEL
Sbjct: 696 IVHNKSMATPIDYVLCIGCFLGKDEDVYTFFEPEL------------------------- 730
Query: 717 LKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAV 776
+K ++ + + +P+K S ++DL ENYFS A+
Sbjct: 731 --------TKKAKSLSSSGSDSPKK-----------------VSSTIVDLKGENYFSVAI 765
Query: 777 GRPRTNARFLLQSSDEVVSFLKKLA 801
G+ T AR+ L SSD+VV + KL
Sbjct: 766 GQTHTKARYFLDSSDDVVKLIGKLC 790
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 973 bits (2516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/682 (65%), Positives = 568/682 (83%), Gaps = 7/682 (1%)
Query: 10 EFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHY 69
+F+ +W+GW GV+V DEI + ALT++LAE +CIPVFL+ + QYYNGYCN ILWP+ H+
Sbjct: 52 QFDTKWVGWPGVDVHDEIEKNALTESLAEMKCIPVFLN-GVFDQYYNGYCNGILWPILHH 110
Query: 70 LGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY 129
+GLPQED+ T ++F++Q+ AY KAN+MF DV+ +Y++GD+VWCHDYHLMFLP+ LKEY
Sbjct: 111 MGLPQEDQHDTNQTFETQYDAYKKANRMFLDVIIDNYEEGDIVWCHDYHLMFLPQYLKEY 170
Query: 130 NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGF 189
N+ +KVGWFLH+PFPSSE+++TLPSRS+LLRA+LAADL+GFHTYD+ARHF+S CTRILG
Sbjct: 171 NNKIKVGWFLHSPFPSSEVYKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGV 230
Query: 190 EGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL 249
EGT EGV QGR+TRVA FPIGID +RFIR ++ V + ELQE FAG+KV+LGVDRL
Sbjct: 231 EGTHEGVVYQGRVTRVAVFPIGIDPDRFIRTCKLPEVTQQMNELQEKFAGKKVILGVDRL 290
Query: 250 DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 309
DMIKGIPQK LAFEKFLEEN WR KVVL+QIAVPTR DVPEY++L SQVH +VGRINGR
Sbjct: 291 DMIKGIPQKYLAFEKFLEENPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGR 350
Query: 310 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL 369
FG+++++PIHHLD S+DF LCA+YA+ DV LVTSLRDGMNLVSYEFVACQ+ KKGVL+L
Sbjct: 351 FGSVSSLPIHHLDCSVDFNYLCAIYAIADVMLVTSLRDGMNLVSYEFVACQEAKKGVLVL 410
Query: 370 SEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWA 429
SEFAGA QSLG GA++VNPW++TEV++AI ALNM EERE RH NF +V TH+A++W
Sbjct: 411 SEFAGAGQSLGVGALIVNPWDVTEVSSAIKEALNMPAEERETRHRSNFQYVCTHSAEKWG 470
Query: 430 ETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRR 489
F+SELN + E++++++++P L E D I++Y +SNNRL+ILGF TL EP+++
Sbjct: 471 LDFMSELNGIIPESEMQMRKIPLQLPEQDVIQQYSQSNNRLIILGFFGTLAEPMNS---- 526
Query: 490 GDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 549
+EM+LKL+P+LK L ALC+DPKTT+VVLS S +N+L+KNF E N+WLAAENGMF
Sbjct: 527 --GTKEMDLKLNPELKGTLKALCNDPKTTVVVLSRSGKNILNKNFGESNIWLAAENGMFE 584
Query: 550 RCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRI 609
+ TTG+W+T MP+++N++WVD +K+VF+YFT+RTPRS+FE ETSLVWNY+YADVEFGR
Sbjct: 585 KQTTGEWVTNMPQNVNLDWVDGVKNVFKYFTDRTPRSYFEASETSLVWNYEYADVEFGRA 644
Query: 610 QARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDY 669
QARD+LQ+LW GPISNASV+VV+G+ SVEV A+G TKGAAI RIL EIVH K M T ID+
Sbjct: 645 QARDLLQYLWAGPISNASVDVVRGNHSVEVHAIGETKGAAIGRILGEIVHRKSMTTPIDF 704
Query: 670 VLCIGHFLGKDEDVYAFFEPEL 691
V C G+FL KDED+Y FFE ++
Sbjct: 705 VFCSGYFLEKDEDIYTFFESKI 726
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SHG0|TPS3_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 3 OS=Arabidopsis thaliana GN=TPS3 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/787 (58%), Positives = 589/787 (74%), Gaps = 51/787 (6%)
Query: 27 IGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS 86
+ + A++K+LAE +CIPVFL+E + QYYNGY N ILWP+ H++GLPQE T ++F++
Sbjct: 46 VEKDAVSKSLAEMKCIPVFLNE-VFDQYYNGYSNGILWPILHHMGLPQEYDHDTIKTFET 104
Query: 87 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS 146
Q+ AY KAN+MF DV+ ++YKDGD+VWC DYHLMFLP+ LKEYN+ +KVGWFLH+PFPSS
Sbjct: 105 QYDAYKKANRMFLDVIKENYKDGDIVWCQDYHLMFLPQYLKEYNNKIKVGWFLHSPFPSS 164
Query: 147 EIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVA 206
EI++TLPSRS+LLR+VLAADL+ FHTYD+ARHFV+ CTRILG EGT EGV QGR+TRV
Sbjct: 165 EIYKTLPSRSELLRSVLAADLISFHTYDFARHFVNTCTRILGVEGTHEGVVYQGRVTRVV 224
Query: 207 AFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 266
P+GI RFI+ ++ V + EL++ F+G+KV+LGVDRLDMIKGIPQK L FEKFL
Sbjct: 225 VLPMGIYPNRFIKTCKLPEVIQQMNELKDRFSGKKVILGVDRLDMIKGIPQKYLGFEKFL 284
Query: 267 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD 326
+EN +WR K+VL+QIAVPTR +VPEYQ+L +QVH +VGRINGRFG+++++PIHH+D S+D
Sbjct: 285 DENPNWRDKIVLVQIAVPTRNEVPEYQKLKNQVHRLVGRINGRFGSVSSLPIHHMDCSVD 344
Query: 327 FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILV 386
LCALYA++DV LVTSLRDG+NLVS+EFVACQ+ K+GVLILSEFAGA QSLGAGA+LV
Sbjct: 345 SNYLCALYAISDVMLVTSLRDGLNLVSHEFVACQEAKRGVLILSEFAGAGQSLGAGALLV 404
Query: 387 NPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLR 446
NPWN+TEV++AI +ALNM EERE RH NF +V TH+A++W F+SELND E++L+
Sbjct: 405 NPWNVTEVSSAIKKALNMPYEERETRHRVNFKYVKTHSAEKWGFDFLSELNDAFDESELQ 464
Query: 447 IKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQ 506
I+++P L + D I+RY SNNRL+ILGF T+TEP R +EM+LKL+P+LK+
Sbjct: 465 IRKIPHELPQQDVIQRYSLSNNRLIILGFYGTITEP------RNSLSKEMDLKLNPELKE 518
Query: 507 PLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNM 566
L ALC+DPKTT+VVLS S +N+LDKNF EY +WLAAENGMFL+ TT +W+T MP+++N+
Sbjct: 519 TLKALCNDPKTTVVVLSRSGKNILDKNFGEYKIWLAAENGMFLKHTTEEWVTNMPQNMNL 578
Query: 567 EWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNA 626
+WVD LK+VF+YFT+RTPRS FE +TSLVWNY+YADVEFGR QARD+LQ+LW GPISNA
Sbjct: 579 DWVDGLKNVFKYFTDRTPRSFFEASKTSLVWNYEYADVEFGRAQARDLLQYLWAGPISNA 638
Query: 627 SVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAF 686
S EVV+G SVEV A+GVTK I IL EIVH K M T IDYV C G+FL KDED+Y F
Sbjct: 639 SAEVVRGKYSVEVHAIGVTKEPEIGHILGEIVHKKAMTTPIDYVFCSGYFLEKDEDIYTF 698
Query: 687 FEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNH 746
FE E+ + K+ E R ++ K
Sbjct: 699 FESEIL-------------SPKLSHETRSKSSSSNHSLEK-------------------- 725
Query: 747 NCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 806
K S NVLDL +ENYFS A+G+ RT AR+++ SS VV+ L KLA A+++
Sbjct: 726 -----------KVSLNVLDLKQENYFSTAIGQARTKARYVVDSSHNVVNLLHKLAVANTT 774
Query: 807 HEAHNGP 813
+ P
Sbjct: 775 TTSVKKP 781
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 552 bits (1423), Expect = e-156, Method: Compositional matrix adjust.
Identities = 282/671 (42%), Positives = 419/671 (62%), Gaps = 51/671 (7%)
Query: 15 WIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYL--GL 72
W+GW G + ++ ++ + CIPVFL E + +++YNG+ N +LWPLFHYL L
Sbjct: 59 WVGWIGAEIEEDDRKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHYLPGDL 118
Query: 73 PQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD 132
+DR+ + +Y++AN+ F+ VV + K D+VW HDYH+M LP+ LK+ D
Sbjct: 119 DYDDRI---------WNSYVEANEQFSSVVAEILKPNDLVWVHDYHMMLLPEILKQKKPD 169
Query: 133 MKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGT 192
++G+FLH PFPSSEI R LP R ++L +L L+GFHTYDYARHF+ +CTRI+G E
Sbjct: 170 ARIGFFLHIPFPSSEIFRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETA 229
Query: 193 PEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMI 252
P GV + R +V FP+GID ++F +L+ VQ IKEL+E+F G KV++G+DRLD I
Sbjct: 230 PNGVYFKDRFVQVGVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYI 289
Query: 253 KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 312
KGIPQKL A E+ ++ +W+GK+VL+Q+AVP+R DV EYQ+L +V E+VGRING +G+
Sbjct: 290 KGIPQKLQAIERLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGS 349
Query: 313 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF 372
+ PIH+L +S+D L ALY ++D AL+TS+RDGMNLV+ E++ CQ GVLILSEF
Sbjct: 350 IGYSPIHYLFQSVDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQTENNGVLILSEF 409
Query: 373 AGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETF 432
GAAQSL +GA+++NPWN EVA++I +L M PEERE++H +VT HTA W F
Sbjct: 410 TGAAQSL-SGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLGF 468
Query: 433 VSELN------DTVVEAQ-LRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDT 485
V ELN D +V Q L I++V ++ Y +S RLLI ++ TL +
Sbjct: 469 VKELNKASSNTDKMVTIQKLDIEKV---------VDIYKQSKRRLLIFAYDGTLIPYNNV 519
Query: 486 PG-RRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAE 544
P R Q +L + L +DPKT + +LSG D+ L + F + L+AE
Sbjct: 520 PQLSRPSQ----------ELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQIGLSAE 569
Query: 545 NGMFLRC-TTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYAD 603
G F + + +W +P +++ W ++++ +F+YFT RTP S FE++E W+Y+ AD
Sbjct: 570 YGCFFKLPESTEWEQQVPS-MDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNAD 628
Query: 604 VEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKM 663
FG IQAR++ HL N ++V+ G K++ VR+ + +++ +++ + +
Sbjct: 629 PIFGSIQARELHLHL-----DNLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTI----- 678
Query: 664 KTAIDYVLCIG 674
+D +L IG
Sbjct: 679 PKGLDLILLIG 689
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00764|TPS1_YEAST Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPS1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/439 (50%), Positives = 306/439 (69%), Gaps = 16/439 (3%)
Query: 5 FEGVKE-FEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNIL 63
EG+K+ + +W GW G+ +PD+ + L + +P+FL ++I +YNG+ N+IL
Sbjct: 51 LEGLKKTYTFKWFGWPGLEIPDDEKDQVRKDLLEKFNAVPIFLSDEIADLHYNGFSNSIL 110
Query: 64 WPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 123
WPLFHY P E ++ + AY +ANQ F + + K D++W HDYHLM +P
Sbjct: 111 WPLFHYH--PGEINFD-----ENAWLAYNEANQTFTNEIAKTMNHNDLIWVHDYHLMLVP 163
Query: 124 KCLK-----EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARH 178
+ L+ + ++KVGWFLHTPFPSSEI+R LP R ++L+ VL+ DLVGFHTYDYARH
Sbjct: 164 EMLRVKIHEKQLQNVKVGWFLHTPFPSSEIYRILPVRQEILKGVLSCDLVGFHTYDYARH 223
Query: 179 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA 238
F+S+ R+L P GVE QGR V AFPIGID ++F L+ VQ I++L+ETF
Sbjct: 224 FLSSVQRVLNVNTLPNGVEYQGRFVNVGAFPIGIDVDKFTDGLKKESVQKRIQQLKETFK 283
Query: 239 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQ 298
G K+++GVDRLD IKG+PQKL A E FL E+ +WRGKVVL+Q+AVP+R DV EYQ L S
Sbjct: 284 GCKIIVGVDRLDYIKGVPQKLHAMEVFLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSV 343
Query: 299 VHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVA 358
V+E+VGRING+FGT+ VPIH + +S+ F L +LYAV+DV LV+S RDGMNLVSYE++A
Sbjct: 344 VNELVGRINGQFGTVEFVPIHFMHKSIPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIA 403
Query: 359 CQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN-F 417
CQ+ KKG LILSEF GAAQSL GAI+VNPWN ++++AI AL + P+ +++ +W +
Sbjct: 404 CQEEKKGSLILSEFTGAAQSLN-GAIIVNPWNTDDLSDAINEALTL-PDVKKEVNWEKLY 461
Query: 418 THVTTHTAQEWAETFVSEL 436
+++ +T+ W E FV EL
Sbjct: 462 KYISKYTSAFWGENFVHEL 480
|
Synthase catalytic subunit of the trehalose synthase complex that catalyzes the production of trehalose from glucose-6-phosphate and UDP-glucose in a two step process. Can function independently of the complex. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q07158|TPS1_KLULA Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TPS1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 226/429 (52%), Positives = 294/429 (68%), Gaps = 15/429 (3%)
Query: 14 RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLP 73
+W GW G+ VPDE K + L + IP+FL +++ +YNG+ N+ILWPLFHY P
Sbjct: 61 QWYGWPGLEVPDEDKAKVKRELLEKFNAIPIFLSDEVADLHYNGFSNSILWPLFHYH--P 118
Query: 74 QEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN--- 130
E T + AY +AN FAD + + D DVVW HDYHLM LP+ +++
Sbjct: 119 GEITFDDT-----AWLAYNEANMAFADEIEGNINDNDVVWVHDYHLMLLPEMIRQRVIAK 173
Query: 131 --SDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILG 188
++K+GWFLHTPFPSSEI+R LP R ++L+ VL+ DL+GFHTYDYARHF+SA RIL
Sbjct: 174 KLKNIKIGWFLHTPFPSSEIYRILPVRQEILKGVLSCDLIGFHTYDYARHFLSAVQRILN 233
Query: 189 FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 248
P GVE GR V AFPIGID E F L+ + V IKEL+E+F G K+++GVDR
Sbjct: 234 VNTLPNGVEFDGRFVNVGAFPIGIDVETFTEGLKQDAVIKRIKELKESFKGCKIIIGVDR 293
Query: 249 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 308
LD IKG+PQKL A E FL + +W GKVVL+Q+AVP+R DV EYQ L S V+E+VGRING
Sbjct: 294 LDYIKGVPQKLHALEVFLGAHPEWIGKVVLVQVAVPSRGDVEEYQYLRSVVNELVGRING 353
Query: 309 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLI 368
+FGT VPIH + RS+ F L +LYAV+DV LV+S RDGMNLVSYE+++CQ+ KKG LI
Sbjct: 354 QFGTAEFVPIHFMHRSIPFQELISLYAVSDVCLVSSTRDGMNLVSYEYISCQEEKKGTLI 413
Query: 369 LSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN-FTHVTTHTAQE 427
LSEF GAAQSL GA++VNPWN ++A +I AL + PEE+ +W + +++ +T+
Sbjct: 414 LSEFTGAAQSLN-GALIVNPWNTDDLAESINEALTV-PEEKRAANWEKLYKYISKYTSAF 471
Query: 428 WAETFVSEL 436
W E FV EL
Sbjct: 472 WGENFVHEL 480
|
Appears to play a role in controlling and restricting the influx of sugar into glycolysis, probably at the level of hexokinase. Necessary for trehalose-6-phosphate synthase and phosphatase activities. Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q00075|TPSA_ASPNG Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Aspergillus niger GN=tpsA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/427 (51%), Positives = 297/427 (69%), Gaps = 12/427 (2%)
Query: 14 RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLP 73
+W GW G+ VP+E + E +PVF+D+++ ++YNG+ N+ILWPLFHY P
Sbjct: 57 QWYGWPGLEVPEEEIPVVKERLKQEYNAVPVFIDDELADRHYNGFSNSILWPLFHYH--P 114
Query: 74 QEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD- 132
E +S + AY +AN++FA V K +DGD++W HDYHLM LP+ L+E D
Sbjct: 115 GEITFD-----ESAWEAYKEANRLFAKAVAKEVQDGDLIWVHDYHLMLLPEMLREEIGDS 169
Query: 133 ---MKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGF 189
+K+G+FLHTPFPSSEI+R LP R++LL VL DL+GFHTYDY RHF+SAC+R+LG
Sbjct: 170 KENVKIGFFLHTPFPSSEIYRILPVRNELLLGVLHCDLIGFHTYDYTRHFLSACSRLLGL 229
Query: 190 EGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL 249
TP G+E QG++ AFPIGID E+F L+ VQ I L++ F G K+M+GVDRL
Sbjct: 230 TTTPNGIEFQGKIIACGAFPIGIDPEKFEEGLKKEKVQKRIAMLEQKFQGVKLMVGVDRL 289
Query: 250 DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 309
D IKG+PQKL A E FL ++ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING+
Sbjct: 290 DYIKGVPQKLHALEVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGK 349
Query: 310 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL 369
FGT+ +PIH L +S++F L ALYAV+D +V+S RDGMNLV+YE++A Q + GVL+L
Sbjct: 350 FGTVEFMPIHFLHKSVNFDELIALYAVSDACIVSSTRDGMNLVAYEYIATQKKRHGVLVL 409
Query: 370 SEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWA 429
SEFAGAAQSL G+I++NPWN E+A A A+ MS E+R +V +T+ W
Sbjct: 410 SEFAGAAQSLN-GSIIINPWNTEELAGAYQEAVTMSDEQRALNFSKLDKYVNKYTSAFWG 468
Query: 430 ETFVSEL 436
++FV+EL
Sbjct: 469 QSFVTEL 475
|
Aspergillus niger (taxid: 5061) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O74932|TPS1_YARLI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/429 (51%), Positives = 293/429 (68%), Gaps = 14/429 (3%)
Query: 14 RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLP 73
+W GW G+ +P++ + + C+PVF+D+D+ +YNG+ N+ILWPLFHY P
Sbjct: 46 QWFGWPGLEIPEKDKPRLINDLETMFSCVPVFMDDDLADLHYNGFSNSILWPLFHYH--P 103
Query: 74 QEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD- 132
E Q + AY +AN++FA V K GD+VW HDYHLM LP+ L+E +
Sbjct: 104 GEMNFD-----QVAWEAYTQANRLFAKKVASIVKPGDIVWVHDYHLMLLPEMLREECENN 158
Query: 133 -----MKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 187
+K+G+FLHTPFPSSEI+R LP R ++L VL+ +L+GFHTYDYARHF+S+ +RIL
Sbjct: 159 SALDGLKIGFFLHTPFPSSEIYRILPVRKEVLTGVLSCNLIGFHTYDYARHFLSSVSRIL 218
Query: 188 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVD 247
E P G +GR V AFPIGID +F+ + VQ I +LQ+ F G KV++GVD
Sbjct: 219 DLETMPNGTYYKGRHVVVGAFPIGIDVNKFLEGCKRPAVQERIAQLQDKFKGIKVVVGVD 278
Query: 248 RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRIN 307
RLD IKG+PQKL AFE FL E+ +W GKVVL+Q+AVP+R V EYQ L + V+E+VGRIN
Sbjct: 279 RLDYIKGVPQKLHAFEVFLSEHPEWIGKVVLVQVAVPSRGLVEEYQNLRAVVNELVGRIN 338
Query: 308 GRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVL 367
G FGT+ PIH + RS+DF L ALY+++DV V+S RDGMNLVSYE+VACQ K G L
Sbjct: 339 GMFGTVEFTPIHFMHRSVDFNELIALYSISDVCFVSSTRDGMNLVSYEYVACQTEKHGSL 398
Query: 368 ILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 427
ILSEF GAAQSL GA++VNPWN ++A A+ +L SPE++ + H F +V+ +T+Q
Sbjct: 399 ILSEFTGAAQSLN-GALIVNPWNTEDMAEALYDSLTFSPEKKAENHRKLFKYVSKYTSQH 457
Query: 428 WAETFVSEL 436
W E FVSEL
Sbjct: 458 WGEAFVSEL 466
|
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O94213|TPS1_PICAN Alpha,alpha-trehalose-phosphate synthase [UDP-forming] OS=Pichia angusta GN=TPS1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/431 (51%), Positives = 301/431 (69%), Gaps = 17/431 (3%)
Query: 14 RWIGWAGVNVPDEIGQKALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILWPLFHYL-G 71
RW GW G++V E G++ + + L EK C P++L ++I +YNG+ N+ILWPLFHY G
Sbjct: 51 RWFGWPGMSVDSEQGRQTVERDLKEKFNCYPIWLSDEIADLHYNGFSNSILWPLFHYHPG 110
Query: 72 LPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK-EYN 130
D +A +AAY++AN++F + K KDGDV+W HDYHLM LP L+ + N
Sbjct: 111 EMNFDEIA--------WAAYLEANKLFCQTILKEIKDGDVIWVHDYHLMLLPSLLRDQLN 162
Query: 131 S----DMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 186
S ++K+G+FLHTPFPSSEI+R LP R ++L VL+ DL+GFHTYDY RHF+S+ RI
Sbjct: 163 SKGLPNVKIGFFLHTPFPSSEIYRILPVRKEILEGVLSCDLIGFHTYDYVRHFLSSVERI 222
Query: 187 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR-KVMLG 245
L +P+GV R V+A+PIGID ++F+ L+ + V+ IK+L+ F K+++G
Sbjct: 223 LKLRTSPQGVVYNDRQVTVSAYPIGIDVDKFLNGLKTDEVKSRIKQLETRFGKDCKLIIG 282
Query: 246 VDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGR 305
VDRLD IKG+PQKL AFE FLE + +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGR
Sbjct: 283 VDRLDYIKGVPQKLHAFEIFLERHPEWIGKVVLIQVAVPSRGDVEEYQSLRAAVNELVGR 342
Query: 306 INGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG 365
INGRFGT+ VPIH L +S++F L ++YA +DV +V+S RDGMNLVSYE++ACQ +KG
Sbjct: 343 INGRFGTVEFVPIHFLHKSVNFQELISVYAASDVCVVSSTRDGMNLVSYEYIACQQDRKG 402
Query: 366 VLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTA 425
L+LSEFAGAAQSL GA++VNPWN E++ AI L MS E+R F ++ +TA
Sbjct: 403 SLVLSEFAGAAQSLN-GALVVNPWNTEELSEAIYEGLIMSEEKRRGNFQKMFKYIEKYTA 461
Query: 426 QEWAETFVSEL 436
W E FV EL
Sbjct: 462 SYWGENFVKEL 472
|
Pichia angusta (taxid: 870730) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 814 | ||||||
| TAIR|locus:2202990 | 942 | TPS1 "trehalose-6-phosphate sy | 0.982 | 0.849 | 0.800 | 0.0 | |
| TAIR|locus:2137712 | 795 | TPS4 "trehalose-6-phosphatase | 0.836 | 0.856 | 0.646 | 3.5e-255 | |
| DICTYBASE|DDB_G0287657 | 733 | tpsA "alpha,alpha-trehalose-ph | 0.756 | 0.840 | 0.419 | 1.1e-135 | |
| TAIR|locus:2200216 | 860 | ATTPS6 [Arabidopsis thaliana ( | 0.522 | 0.494 | 0.380 | 1.1e-119 | |
| SGD|S000000330 | 495 | TPS1 "Synthase subunit of treh | 0.520 | 0.856 | 0.497 | 1.2e-111 | |
| TAIR|locus:2054027 | 862 | TPS11 "trehalose phosphatase/s | 0.418 | 0.395 | 0.400 | 2.4e-110 | |
| UNIPROTKB|G4NHF4 | 529 | MGG_03860 "Alpha,alpha-trehalo | 0.511 | 0.786 | 0.507 | 3.8e-110 | |
| ASPGD|ASPL0000027021 | 504 | tpsA [Emericella nidulans (tax | 0.528 | 0.853 | 0.488 | 4.3e-109 | |
| CGD|CAL0004028 | 478 | TPS1 [Candida albicans (taxid: | 0.531 | 0.905 | 0.487 | 1.5e-108 | |
| UNIPROTKB|Q92410 | 478 | TPS1 "Alpha,alpha-trehalose-ph | 0.531 | 0.905 | 0.487 | 1.5e-108 |
| TAIR|locus:2202990 TPS1 "trehalose-6-phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3405 (1203.7 bits), Expect = 0., P = 0.
Identities = 652/814 (80%), Positives = 707/814 (86%)
Query: 7 GVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPL 66
GVKEFEARWIGWAGVNVPDE+GQKAL+KALAEKRCIPVFLDE+IVHQYYNGYCNNILWPL
Sbjct: 128 GVKEFEARWIGWAGVNVPDEVGQKALSKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPL 187
Query: 67 FHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 126
FHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWCHDYHLMFLPKCL
Sbjct: 188 FHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCHDYHLMFLPKCL 247
Query: 127 KEYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRI 186
KEYNS MKVGWFLHTPFPSSEIHRTLP GFHTYDYARHFVSACTRI
Sbjct: 248 KEYNSKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRI 307
Query: 187 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGV 246
LG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE+ V H+KEL+E FAGRKVMLGV
Sbjct: 308 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERFAGRKVMLGV 367
Query: 247 DRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 306
DRLDMIKGIPQK+LAFEKFLEEN++WR KVVLLQIAVPTRTDVPEYQ+LTSQVHEIVGRI
Sbjct: 368 DRLDMIKGIPQKILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRI 427
Query: 307 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 366
NGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSYEFVACQ+ KKGV
Sbjct: 428 NGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEAKKGV 487
Query: 367 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQ 426
LILSEFAGAAQSLGAGAILVNPWNITEVA +I +ALNM+ EEREKRH HNF HV THTAQ
Sbjct: 488 LILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRHNFHHVKTHTAQ 547
Query: 427 EWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTP 486
EWAETFVSELNDTV+EAQLRI +VPP L + D+I+RY +SNNRLLILGFNATLTEPVD
Sbjct: 548 EWAETFVSELNDTVIEAQLRISKVPPELPQHDAIQRYSKSNNRLLILGFNATLTEPVDNQ 607
Query: 487 GRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 546
GRRGDQI+EM+L LHP+LK PL ALC DP TTIVVLSGS R+VLDKNF EY++WLAAENG
Sbjct: 608 GRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLDKNFGEYDMWLAAENG 667
Query: 547 MFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEF 606
MFLR T G+WMTTMPEHLNMEWVDS+KHVF+YFTERTPRSHFE R+TSL+WNYKYAD+EF
Sbjct: 668 MFLRLTNGEWMTTMPEHLNMEWVDSVKHVFKYFTERTPRSHFETRDTSLIWNYKYADIEF 727
Query: 607 GRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA 666
GR+QARD+LQHLWTGPISNASV+VVQGS+SVEVRAVGVTKGAAIDRIL EIVHSK M T
Sbjct: 728 GRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTTP 787
Query: 667 IDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTD---AIKVPGERRQALKVA--- 720
IDYVLCIGHFLGKDEDVY FFEPELP D P I R+RP+ A G+RR K
Sbjct: 788 IDYVLCIGHFLGKDEDVYTFFEPELPSDMPAIARSRPSSDSGAKSSSGDRRPPSKSTHNN 847
Query: 721 SRGSSKISQGK--------TQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYF 772
++ SK S +QR Q+ K NH+ N R+PS +K S+NVLDL ENYF
Sbjct: 848 NKSGSKSSSSSNSNNNNKSSQRSLQSERKSGSNHSLGNSRRPSPEKISWNVLDLKGENYF 907
Query: 773 SCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 806
SCAVGR RTNAR+LL S D+VV FL+KLAD +SS
Sbjct: 908 SCAVGRTRTNARYLLGSPDDVVCFLEKLADTTSS 941
|
|
| TAIR|locus:2137712 TPS4 "trehalose-6-phosphatase synthase S4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2364 (837.2 bits), Expect = 3.5e-255, Sum P(2) = 3.5e-255
Identities = 449/695 (64%), Positives = 541/695 (77%)
Query: 7 GVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPL 66
G+KEFE +WIGW GV+V D IG+K L+ LAEK CIPVFL+E + QYYNGYCNNILWP+
Sbjct: 40 GLKEFETKWIGWPGVDVHDAIGKKTLSITLAEKGCIPVFLEE-VCDQYYNGYCNNILWPI 98
Query: 67 FHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 126
FHYLG P E R T ++QSQ+ AY KANQ+F DVV +HY++GDVVWCHDYH+M LP+ L
Sbjct: 99 FHYLGTPPEYRNDATITYQSQYEAYKKANQIFFDVVKEHYEEGDVVWCHDYHVMLLPQYL 158
Query: 127 KEYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRI 186
KEYNS MKVGWFLHTPFPSSE+++TLP GFHTYD+ARHF++AC I
Sbjct: 159 KEYNSKMKVGWFLHTPFPSSEMYKTLPSRSDLLRSVLTADLVGFHTYDFARHFLNACMCI 218
Query: 187 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGV 246
LG E T EG+ DQG++TRVA FPIGI+ ERFI E++ V ++K+ + F GRK++LGV
Sbjct: 219 LGVEATSEGIVDQGKVTRVAVFPIGIEPERFINTSELSEVVQYMKKFKNDFGGRKLILGV 278
Query: 247 DRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 306
DRLD IKGIPQK AFEKFLEEN++WRGKV+LLQIAVPTR + EYQ++ Q H VGRI
Sbjct: 279 DRLDTIKGIPQKYQAFEKFLEENAEWRGKVMLLQIAVPTRNGIGEYQKIKDQCHYHVGRI 338
Query: 307 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 366
NGRFG++++VPI HLD S+DF LCALYA+TDV LVTSLRDGMNLVS EF+ACQ +KGV
Sbjct: 339 NGRFGSISSVPIIHLDCSIDFNQLCALYAITDVLLVTSLRDGMNLVSSEFIACQKAEKGV 398
Query: 367 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQ 426
LILSEFAGA QSLGAGAILVNPWNI EV++AI ALNMS EE+E++H NF +V TH+ Q
Sbjct: 399 LILSEFAGAGQSLGAGAILVNPWNIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQ 458
Query: 427 EWAETFV---------SELNDTVVEAQLRIKQVPP-SLREADSIERYLRSNNRLLILGFN 476
+WA+ F+ S+L + A+L L E D I++Y +SNNRLLILGF
Sbjct: 459 QWADDFMKLTLTNILCSKLIEITTSAELGAGLAATLELPEHDVIQQYSKSNNRLLILGFY 518
Query: 477 ATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 536
TLT+P+ RRGD M L+LHP LK+ L LC DPKTT+VVLS S++ +LDKNF E
Sbjct: 519 GTLTQPMKNQERRGDG---MNLELHPQLKERLKELCSDPKTTVVVLSRSEKCILDKNFGE 575
Query: 537 YNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV 596
YN+WLAAENGMFLR T+G+W+T +PEH+N+EW+D +KHVF+YFTERTP S+ E E SLV
Sbjct: 576 YNMWLAAENGMFLRHTSGEWVTRIPEHMNLEWIDGVKHVFKYFTERTPGSYLETSEASLV 635
Query: 597 WNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAE 656
WNY+ AD EFGR QARDMLQHLW GPISNASV+VV+G +SVEV AVGVTKG+A++RIL E
Sbjct: 636 WNYENADAEFGRAQARDMLQHLWAGPISNASVDVVRGGQSVEVHAVGVTKGSAMERILGE 695
Query: 657 IVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPEL 691
IVH+K M T IDYVLCIG FLGKDEDVY FFEPEL
Sbjct: 696 IVHNKSMATPIDYVLCIGCFLGKDEDVYTFFEPEL 730
|
|
| DICTYBASE|DDB_G0287657 tpsA "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 1329 (472.9 bits), Expect = 1.1e-135, P = 1.1e-135
Identities = 270/643 (41%), Positives = 391/643 (60%)
Query: 15 WIGWAGVNVPDEIGQKALTKAL-AEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYL--G 71
W+GW G + +E +K + + L + CIPVFL E + +++YNG+ N +LWPLFHYL
Sbjct: 59 WVGWIGAEI-EEDDRKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHYLPGD 117
Query: 72 LPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS 131
L +DR+ + +Y++AN+ F+ VV + K D+VW HDYH+M LP+ LK+
Sbjct: 118 LDYDDRI---------WNSYVEANEQFSSVVAEILKPNDLVWVHDYHMMLLPEILKQKKP 168
Query: 132 DMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGFEG 191
D ++G+FLH PFPSSEI R LP GFHTYDYARHF+ +CTRI+G E
Sbjct: 169 DARIGFFLHIPFPSSEIFRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLET 228
Query: 192 TPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDM 251
P GV + R +V FP+GID ++F +L+ VQ IKEL+E+F G KV++G+DRLD
Sbjct: 229 APNGVYFKDRFVQVGVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDY 288
Query: 252 IKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFG 311
IKGIPQKL A E+ ++ +W+GK+VL+Q+AVP+R DV EYQ+L +V E+VGRING +G
Sbjct: 289 IKGIPQKLQAIERLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYG 348
Query: 312 TLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE 371
++ PIH+L +S+D L ALY ++D AL+TS+RDGMNLV+ E++ CQ GVLILSE
Sbjct: 349 SIGYSPIHYLFQSVDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQTENNGVLILSE 408
Query: 372 FAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAET 431
F GAAQSL +GA+++NPWN EVA++I +L M PEERE++H +VT HTA W
Sbjct: 409 FTGAAQSL-SGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLG 467
Query: 432 FVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGD 491
FV ELN + + + ++ Y +S RLLI ++ TL + P
Sbjct: 468 FVKELNKASSNTDKMVTIQKLDIEKV--VDIYKQSKRRLLIFAYDGTLIPYNNVP----- 520
Query: 492 QIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC 551
Q+ +L + L +DPKT + +LSG D+ L + F + L+AE G F +
Sbjct: 521 QLSRPS----QELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQIGLSAEYGCFFKL 576
Query: 552 TTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQ 610
+W +P +++ W ++++ +F+YFT RTP S FE++E W+Y+ AD FG IQ
Sbjct: 577 PESTEWEQQVPS-MDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADPIFGSIQ 635
Query: 611 ARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRI 653
AR++ HL P+ + G +S + + K D I
Sbjct: 636 ARELHLHLDNLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTI 678
|
|
| TAIR|locus:2200216 ATTPS6 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 764 (274.0 bits), Expect = 1.1e-119, Sum P(3) = 1.1e-119
Identities = 173/455 (38%), Positives = 262/455 (57%)
Query: 7 GVKEFEARWIGWAGVNVP-DEIGQKALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILW 64
G + E ++G +P +E Q+ + + L E +C+P FL D+ +YY+G+C LW
Sbjct: 106 GDEAIEVIYVGCLKEEIPLNE--QEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLW 163
Query: 65 PLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFAD-VVNKHYKDGDVVWCHDYHLMFLP 123
PLFHY+ LP L R ++ + AY+ N++FAD ++ + D VW HDYHLM LP
Sbjct: 164 PLFHYM-LPLSPDLGG-RFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLP 221
Query: 124 KCLKEYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSAC 183
L++ + +K+G+FLH+PFPSSEI++TLP GFHT+DYARHF+S C
Sbjct: 222 TFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCC 281
Query: 184 TRILG--FEGTPE--GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA- 238
+R+LG +E G+E GR + P+GI + L + + + EL E +
Sbjct: 282 SRMLGLTYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGR 341
Query: 239 -GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTS 297
GR ++LGVD +D+ KGI KLLA E+ L ++ +W+GKVVL+QIA P R + + + +
Sbjct: 342 KGRTMLLGVDDMDIFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQA 401
Query: 298 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFV 357
+ + V RIN FG PI +D L F A Y V + LVT++RDGMNL+ YE++
Sbjct: 402 ETYSTVKRINETFGRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYI 461
Query: 358 ACQD----L------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARA 401
+ L KK +L++SEF G + SL +GAI VNPWN+ VA+A+ A
Sbjct: 462 VSRQGNEKLDKILKLEANNRNKKSMLVVSEFIGCSPSL-SGAIRVNPWNVDAVADAMDSA 520
Query: 402 LNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 436
L ++ E++ RH ++ +V+TH WA +F+ +L
Sbjct: 521 LEVAEPEKQLRHEKHYKYVSTHDVGYWARSFLQDL 555
|
|
| SGD|S000000330 TPS1 "Synthase subunit of trehalose-6-P synthase/phosphatase complex" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 1102 (393.0 bits), Expect = 1.2e-111, P = 1.2e-111
Identities = 220/442 (49%), Positives = 299/442 (67%)
Query: 6 EGVKE-FEARWIGWAGVNVPDEIGQKALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNIL 63
EG+K+ + +W GW G+ +PD+ + + K L EK +P+FL ++I +YNG+ N+IL
Sbjct: 52 EGLKKTYTFKWFGWPGLEIPDD-EKDQVRKDLLEKFNAVPIFLSDEIADLHYNGFSNSIL 110
Query: 64 WPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLP 123
WPLFHY P E ++ + AY +ANQ F + + K D++W HDYHLM +P
Sbjct: 111 WPLFHYH--PGEINFD-----ENAWLAYNEANQTFTNEIAKTMNHNDLIWVHDYHLMLVP 163
Query: 124 KCLK-----EYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARH 178
+ L+ + ++KVGWFLHTPFPSSEI+R LP GFHTYDYARH
Sbjct: 164 EMLRVKIHEKQLQNVKVGWFLHTPFPSSEIYRILPVRQEILKGVLSCDLVGFHTYDYARH 223
Query: 179 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA 238
F+S+ R+L P GVE QGR V AFPIGID ++F L+ VQ I++L+ETF
Sbjct: 224 FLSSVQRVLNVNTLPNGVEYQGRFVNVGAFPIGIDVDKFTDGLKKESVQKRIQQLKETFK 283
Query: 239 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQ 298
G K+++GVDRLD IKG+PQKL A E FL E+ +WRGKVVL+Q+AVP+R DV EYQ L S
Sbjct: 284 GCKIIVGVDRLDYIKGVPQKLHAMEVFLNEHPEWRGKVVLVQVAVPSRGDVEEYQYLRSV 343
Query: 299 VHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVA 358
V+E+VGRING+FGT+ VPIH + +S+ F L +LYAV+DV LV+S RDGMNLVSYE++A
Sbjct: 344 VNELVGRINGQFGTVEFVPIHFMHKSIPFEELISLYAVSDVCLVSSTRDGMNLVSYEYIA 403
Query: 359 CQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN-F 417
CQ+ KKG LILSEF GAAQSL GAI+VNPWN ++++AI AL + P+ +++ +W +
Sbjct: 404 CQEEKKGSLILSEFTGAAQSLN-GAIIVNPWNTDDLSDAINEALTL-PDVKKEVNWEKLY 461
Query: 418 THVTTHTAQEWAETFVSELNDT 439
+++ +T+ W E FV EL T
Sbjct: 462 KYISKYTSAFWGENFVHELYST 483
|
|
| TAIR|locus:2054027 TPS11 "trehalose phosphatase/synthase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 626 (225.4 bits), Expect = 2.4e-110, Sum P(3) = 2.4e-110
Identities = 143/357 (40%), Positives = 206/357 (57%)
Query: 10 EFEARWIGWAGVNV-PDEIGQKALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILWPLF 67
E E ++G +V P E Q+ +++ L EK +C+P FL D++++YY+G+C + LWP+F
Sbjct: 92 ETEVVYVGSLNADVLPSE--QEDVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKHYLWPIF 149
Query: 68 HYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYK-DGDVVWCHDYHLMFLPKCL 126
HYL LP + +S + AY N++FAD + + D D VW HDYHLM LP L
Sbjct: 150 HYL-LPMTQAQGSLFD-RSNWRAYTTVNKIFADKIFEVLNPDDDYVWIHDYHLMILPTFL 207
Query: 127 KEYNSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRI 186
+ +K+G FLH+PFPSSEI+RTLP GFHT+DYARHF+S C+R+
Sbjct: 208 RNRFHRIKLGIFLHSPFPSSEIYRTLPVRDEILKGFLNCDLVGFHTFDYARHFLSCCSRM 267
Query: 187 LGFEGTPE----GVEDQGRLTRVAAFPIGIDSERF--IRALEINPVQVHIKELQETFAGR 240
LG + + G+E GR + P+GI + I+A E +V K L+E F G
Sbjct: 268 LGLDYESKRGYIGLEYFGRTVSIKILPVGIHMGQIESIKASEKTAEKV--KRLRERFKGN 325
Query: 241 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVH 300
VMLGVD LDM KGI K A + LE+N + RGKVVL+QI P R+ + Q + Q++
Sbjct: 326 IVMLGVDDLDMFKGISLKFWAMGQLLEQNEELRGKVVLVQITNPARSSGKDVQDVEKQIN 385
Query: 301 EIVGRINGRFGTLTAV-PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEF 356
I IN +FG PI ++ + A YA+++ +V ++RDGMNLV Y++
Sbjct: 386 LIADEINSKFGRPGGYKPIVFINGPVSTLDKVAYYAISECVVVNAVRDGMNLVPYKY 442
|
|
| UNIPROTKB|G4NHF4 MGG_03860 "Alpha,alpha-trehalose-phosphate synthase 1" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 1088 (388.1 bits), Expect = 3.8e-110, P = 3.8e-110
Identities = 217/428 (50%), Positives = 287/428 (67%)
Query: 14 RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLP 73
+W GW G+ VPD + + E PVF+D+++ ++YNG+ N+ILWPLFHY P
Sbjct: 58 QWYGWPGLEVPDAEAGPVVQRLKNEYGAHPVFVDDELADRHYNGFANSILWPLFHYH--P 115
Query: 74 QEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSD- 132
E +S ++AY + N++FA V K +DGD++W HDYHLM LP+ L+E D
Sbjct: 116 GEITFD-----ESAWSAYKEVNRLFAQTVVKDVQDGDMIWVHDYHLMLLPEMLREEIGDS 170
Query: 133 ---MKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGF 189
+K+G+FLHTPFPSSEI+R LP GFHTYDYARHF+S+C+RIL
Sbjct: 171 KKNVKIGFFLHTPFPSSEIYRILPVRQALLQGVLHCDLLGFHTYDYARHFLSSCSRILSA 230
Query: 190 EGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL 249
TP GV+ GR V AFPIGID E+F+ L+ VQ I L F G K+++GVDRL
Sbjct: 231 PTTPNGVQFAGRFVTVGAFPIGIDPEKFVEGLQKPKVQQRIAALTRKFEGVKLIVGVDRL 290
Query: 250 DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 309
D IKG+PQKL A E FL E+ +W GK+VL+Q+AVP+R DV EYQ L + V+E+VGRING+
Sbjct: 291 DYIKGVPQKLHALEVFLTEHPEWIGKIVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGK 350
Query: 310 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL 369
FGT+ +PIH L +S+ F L ALYAV+DV LV+S RDGMNLVSYE++A Q + GV+IL
Sbjct: 351 FGTIEFMPIHFLHQSVSFDELAALYAVSDVCLVSSTRDGMNLVSYEYIATQRDRHGVMIL 410
Query: 370 SEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWA 429
SEF GAAQSL +G+++VNPWN E+ANAI A+ M PE+RE +V +T+ W
Sbjct: 411 SEFTGAAQSL-SGSLIVNPWNTEELANAIHDAVTMGPEQREANFKKLERYVFKYTSAWWG 469
Query: 430 ETFVSELN 437
+FV+ELN
Sbjct: 470 SSFVAELN 477
|
|
| ASPGD|ASPL0000027021 tpsA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 1078 (384.5 bits), Expect = 4.3e-109, P = 4.3e-109
Identities = 217/444 (48%), Positives = 295/444 (66%)
Query: 14 RWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLP 73
+W GW G+ VP+E + E IPVF+D+++ ++YNG+ N+ILWPLFHY P
Sbjct: 56 QWYGWPGLEVPEEEIPTLKNRLKEEYNAIPVFIDDELADRHYNGFSNSILWPLFHYH--P 113
Query: 74 QEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY--NS 131
E +S + AY +AN++FA V +DGD++W HDYHLM LP+ L+E N+
Sbjct: 114 GEITFD-----ESAWEAYKEANRLFAQAVASQVQDGDLIWVHDYHLMLLPEMLREEIGNT 168
Query: 132 --DMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFVSACTRILGF 189
++K+G+FLHTPFPSSEI+R LP GFHTYDY RHF+SAC+R+LG
Sbjct: 169 KKNIKIGFFLHTPFPSSEIYRILPVRNELLLGLLHCDLIGFHTYDYTRHFLSACSRLLGL 228
Query: 190 EGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL 249
TP G+E QG++ AFPIGID E+F L+ VQ I L++ F G K+M+GVDRL
Sbjct: 229 PTTPNGIEFQGKIIACGAFPIGIDPEKFKEGLKKEKVQKRIATLEQKFQGVKLMVGVDRL 288
Query: 250 DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 309
D IKG+PQKL A E FL ++ +W GKVVL+Q+AVP+R DV EYQ L + V+E+VGRING+
Sbjct: 289 DYIKGVPQKLHALEVFLSDHPEWVGKVVLVQVAVPSRQDVEEYQNLRAVVNELVGRINGK 348
Query: 310 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL 369
FGT+ +PIH L +S++F L ALYAV+D +V+S RDGMNLVSYE++A Q+ + G L+L
Sbjct: 349 FGTVEFMPIHFLHKSVNFDELIALYAVSDACVVSSTRDGMNLVSYEYIATQEKRHGSLVL 408
Query: 370 SEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWA 429
SEFAGAAQSL G+I+VNPWN E+A A A+ MS E+R +V +T+ W
Sbjct: 409 SEFAGAAQSLN-GSIIVNPWNTEELAAAYHEAVTMSDEQRALNFSKLDKYVNKYTSAFWG 467
Query: 430 ETFVSELNDTVVEA--QLRIKQVP 451
++FV+EL +A +L K+ P
Sbjct: 468 QSFVTELTRISEQAAGKLPTKETP 491
|
|
| CGD|CAL0004028 TPS1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 218/447 (48%), Positives = 296/447 (66%)
Query: 6 EGVKEF-EARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILW 64
+G+K+ E +W GW G+ +P++ K + ++ C +FL + I +YNG+ N+ILW
Sbjct: 39 QGLKKTTEFQWYGWPGLEIPEDEQTKVNDELKSKFNCTAIFLSDTIADLHYNGFSNSILW 98
Query: 65 PLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPK 124
PLFHY P E ++ +AAYI+AN+ FA + K D D++W HDYHLM LP+
Sbjct: 99 PLFHYH--PGEMNFD-----ENAWAAYIEANKKFALEIVKQVNDDDMIWVHDYHLMLLPE 151
Query: 125 CLKEY----NSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFV 180
L++ ++K+G+FLHTPFPSSEI+R LP GFHTYDYARHF+
Sbjct: 152 MLRQEIGNKKKNIKIGFFLHTPFPSSEIYRILPVRKEILEGVLSCDLIGFHTYDYARHFI 211
Query: 181 SACTRILGFEGT-PEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG 239
S+ +RI+ T P G++ QGR + AFPIGID + FI L+ + V IK+L+ F
Sbjct: 212 SSVSRIVPNVSTLPNGIKYQGRSISIGAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKD 271
Query: 240 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQV 299
KV++GVDRLD IKG+PQKL AFE FL EN +W GKVVL+Q+AVP+R DV EYQ L S V
Sbjct: 272 VKVIVGVDRLDYIKGVPQKLHAFEVFLNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTV 331
Query: 300 HEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 359
E+VGRING FGT+ VPIH+L +S+ F L +LY ++DV LV+S RDGMNLVSYE++AC
Sbjct: 332 SELVGRINGEFGTVEFVPIHYLHKSIPFDELISLYNISDVCLVSSTRDGMNLVSYEYIAC 391
Query: 360 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 419
Q +KGVLILSEFAGAAQSL GA++VNPWN +++ AI +L + E+RE FT+
Sbjct: 392 QQDRKGVLILSEFAGAAQSLN-GALIVNPWNTEDLSEAIKESLTLPEEKREFNFKKLFTY 450
Query: 420 VTTHTAQEWAETFVSELNDTVVEAQLR 446
++ +T+ W E+FV EL + LR
Sbjct: 451 ISKYTSGFWGESFVKELYKCNPQKSLR 477
|
|
| UNIPROTKB|Q92410 TPS1 "Alpha,alpha-trehalose-phosphate synthase [UDP-forming]" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 1073 (382.8 bits), Expect = 1.5e-108, P = 1.5e-108
Identities = 218/447 (48%), Positives = 296/447 (66%)
Query: 6 EGVKEF-EARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILW 64
+G+K+ E +W GW G+ +P++ K + ++ C +FL + I +YNG+ N+ILW
Sbjct: 39 QGLKKTTEFQWYGWPGLEIPEDEQTKVNDELKSKFNCTAIFLSDTIADLHYNGFSNSILW 98
Query: 65 PLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPK 124
PLFHY P E ++ +AAYI+AN+ FA + K D D++W HDYHLM LP+
Sbjct: 99 PLFHYH--PGEMNFD-----ENAWAAYIEANKKFALEIVKQVNDDDMIWVHDYHLMLLPE 151
Query: 125 CLKEY----NSDMKVGWFLHTPFPSSEIHRTLPXXXXXXXXXXXXXXXGFHTYDYARHFV 180
L++ ++K+G+FLHTPFPSSEI+R LP GFHTYDYARHF+
Sbjct: 152 MLRQEIGNKKKNIKIGFFLHTPFPSSEIYRILPVRKEILEGVLSCDLIGFHTYDYARHFI 211
Query: 181 SACTRILGFEGT-PEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG 239
S+ +RI+ T P G++ QGR + AFPIGID + FI L+ + V IK+L+ F
Sbjct: 212 SSVSRIVPNVSTLPNGIKYQGRSISIGAFPIGIDVDNFIDGLKKDSVVERIKQLKSKFKD 271
Query: 240 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQV 299
KV++GVDRLD IKG+PQKL AFE FL EN +W GKVVL+Q+AVP+R DV EYQ L S V
Sbjct: 272 VKVIVGVDRLDYIKGVPQKLHAFEVFLNENPEWIGKVVLVQVAVPSRGDVEEYQSLRSTV 331
Query: 300 HEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 359
E+VGRING FGT+ VPIH+L +S+ F L +LY ++DV LV+S RDGMNLVSYE++AC
Sbjct: 332 SELVGRINGEFGTVEFVPIHYLHKSIPFDELISLYNISDVCLVSSTRDGMNLVSYEYIAC 391
Query: 360 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 419
Q +KGVLILSEFAGAAQSL GA++VNPWN +++ AI +L + E+RE FT+
Sbjct: 392 QQDRKGVLILSEFAGAAQSLN-GALIVNPWNTEDLSEAIKESLTLPEEKREFNFKKLFTY 450
Query: 420 VTTHTAQEWAETFVSELNDTVVEAQLR 446
++ +T+ W E+FV EL + LR
Sbjct: 451 ISKYTSGFWGESFVKELYKCNPQKSLR 477
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9SYM4 | TPS1_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.8157 | 0.9828 | 0.8492 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.983 |
| 4th Layer | 2.4.1.15 | 0.979 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
 |
 |
 |
 |
 |
 |
 |
 |
||
 | estExt_fgenesh4_pg.C_1680018 | hypothetical protein (922 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | estExt_fgenesh4_pg.C_LG_III0902 | hypothetical protein (662 aa) | • | 0.702 | |||||||
 | PtpRR9 | pseudo response regulator (541 aa) | • | 0.683 | |||||||
 | fgenesh4_pg.C_scaffold_122000043 | hypothetical protein (472 aa) | • | 0.683 | |||||||
 | estExt_fgenesh4_pm.C_LG_VI0700 | hypothetical protein (664 aa) | • | 0.683 | |||||||
 | estExt_fgenesh4_pg.C_LG_X0958 | hypothetical protein (587 aa) | • | 0.683 | |||||||
 | gw1.XII.661.1 | hypothetical protein (269 aa) | • | • | • | 0.581 | |||||
 | gw1.XV.542.1 | hypothetical protein (267 aa) | • | • | • | 0.580 | |||||
 | gw1.II.1542.1 | hypothetical protein (305 aa) | • | • | 0.514 | ||||||
 | estExt_fgenesh4_pg.C_LG_V1131 | hypothetical protein (1171 aa) | • | 0.510 | |||||||
 | estExt_Genewise1_v1.C_LG_XIV1950 | hypothetical protein (750 aa) | • | 0.510 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 814 | |||
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 0.0 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 1e-177 | |
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 1e-140 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 6e-82 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 2e-81 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 9e-73 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 8e-26 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 7e-12 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 1e-06 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 6e-06 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 5e-04 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 9e-04 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 1682 bits (4357), Expect = 0.0
Identities = 680/803 (84%), Positives = 735/803 (91%), Gaps = 3/803 (0%)
Query: 7 GVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPL 66
GVKEFEARWIGWAGVNVPDE+GQKALTKALAEKRCIPVFLDE+IVHQYYNGYCNNILWPL
Sbjct: 130 GVKEFEARWIGWAGVNVPDEVGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPL 189
Query: 67 FHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 126
FHYLGLPQEDRLATTRSFQSQFAAY KANQMFADVVN+HY++GDVVWCHDYHLMFLPKCL
Sbjct: 190 FHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEGDVVWCHDYHLMFLPKCL 249
Query: 127 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 186
KEYNS+MKVGWFLHTPFPSSEIHRTLPSRS+LLR+VLAADLVGFHTYDYARHFVSACTRI
Sbjct: 250 KEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRI 309
Query: 187 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGV 246
LG EGTPEGVEDQGRLTRVAAFPIGIDS+RFIRALE VQ HIKEL+E FAGRKVMLGV
Sbjct: 310 LGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGV 369
Query: 247 DRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 306
DRLDMIKGIPQK+LAFEKFLEEN +WR KVVLLQIAVPTRTDVPEYQ+LTSQVHEIVGRI
Sbjct: 370 DRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRI 429
Query: 307 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 366
NGRFGTLTAVPIHHLDRSLDF ALCALYAVTDVALVTSLRDGMNLVSYEFVACQD KKGV
Sbjct: 430 NGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGV 489
Query: 367 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQ 426
LILSEFAGAAQSLGAGAILVNPWNITEVA +IA+ALNM EEREKRH HNF HVTTHTAQ
Sbjct: 490 LILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQ 549
Query: 427 EWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTP 486
EWAETFVSELNDTVVEAQLR +QVPP L D+I+RYL+SNNRLLILGFNATLTEPVDTP
Sbjct: 550 EWAETFVSELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTP 609
Query: 487 GRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 546
GRRGDQI+EMEL+LHP+LK+PL ALC DPKTTIVVLSGSDR+VLD+NF E+++WLAAENG
Sbjct: 610 GRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDMWLAAENG 669
Query: 547 MFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEF 606
MFLR T G+WMTTMPEHLNM+WVDS+KHVFEYFTERTPRSHFE RETSLVWNYKYADVEF
Sbjct: 670 MFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEF 729
Query: 607 GRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA 666
GR+QARDMLQHLWTGPISNA+V+VVQGS+SVEVR VGVTKGAAIDRIL EIVHSK M T
Sbjct: 730 GRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTP 789
Query: 667 IDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKV-ASRGSS 725
IDYVLCIGHFLGKDED+Y FFEPELP D P I R+R D +K G+RR + K+ +SR +S
Sbjct: 790 IDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNS 849
Query: 726 KISQGKTQRPAQAPEKKTPNH--NCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNA 783
K SQGK QR + K NH + + R+PS +K ++VLDL ENYFSCAVGR R+NA
Sbjct: 850 KNSQGKKQRSLLSSAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNA 909
Query: 784 RFLLQSSDEVVSFLKKLADASSS 806
R+LL SSD+VVSFLK+LA+ASSS
Sbjct: 910 RYLLGSSDDVVSFLKELANASSS 932
|
Length = 934 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 1303 bits (3373), Expect = 0.0
Identities = 531/800 (66%), Positives = 633/800 (79%), Gaps = 57/800 (7%)
Query: 7 GVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPL 66
GVKEFE +WIGW GV+V DEIG+ ALT++LAEK CIPVFL+ ++ QYYNGYCNNILWP+
Sbjct: 47 GVKEFETKWIGWPGVDVHDEIGKAALTESLAEKGCIPVFLN-EVFDQYYNGYCNNILWPI 105
Query: 67 FHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 126
FHY+GLPQEDR TR+F+SQ+ AY KAN+MF DVV ++Y++GDVVWCHDYHLMFLP+ L
Sbjct: 106 FHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLPQYL 165
Query: 127 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 186
KEYN+ MKVGWFLHTPFPSSEI++TLPSRS+LLRAVL ADL+GFHTYD+ARHF+SACTRI
Sbjct: 166 KEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRI 225
Query: 187 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGV 246
LG EGT EGV DQG++TRVA FPIGID ERFI E+ V+ H+KEL+ FAGRKV+LGV
Sbjct: 226 LGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGV 285
Query: 247 DRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 306
DRLDMIKGIPQK LAFEKFLEEN +WR KV+L+QIAVPTR DVPEYQ+L SQVHE+VGRI
Sbjct: 286 DRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRI 345
Query: 307 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 366
NGRFG++++VPIHHLD S+DF LCALYA+TDV LVTSLRDGMNLVSYEFVACQ KKGV
Sbjct: 346 NGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGV 405
Query: 367 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQ 426
L+LSEFAGA QSLGAGA+LVNPWNITEV++AI ALNMS EERE RH HNF +V TH+AQ
Sbjct: 406 LVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQ 465
Query: 427 EWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTP 486
+WA+ F+SELND +VEA+LR + +P L E D I++Y +SNNRLLILGF TLTEP
Sbjct: 466 KWADDFMSELNDIIVEAELRTRNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEP---- 521
Query: 487 GRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENG 546
R QI+EM+L LHP+LK+ L ALC DPKTT+VVLS S +++LDKNF EYN+WLAAENG
Sbjct: 522 --RNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENG 579
Query: 547 MFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEF 606
MFLR T+G+W+TTMPEH+N++WVD +K+VF+YFT+RTPRS+ E+ ETSLVWNY+YADVEF
Sbjct: 580 MFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEF 639
Query: 607 GRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA 666
GR QARDMLQHLW GPISNASV+VV+G KSVEV A+GVTKGAAI RIL EIVH+K M T
Sbjct: 640 GRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTP 699
Query: 667 IDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSK 726
ID+V C G+FL KDEDVY FFEPE+
Sbjct: 700 IDFVFCSGYFLEKDEDVYTFFEPEIL---------------------------------- 725
Query: 727 ISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFL 786
K + + K S N++DL ENYFSCA+G+ RT AR++
Sbjct: 726 --------------SKKKSSSSNYSDSDK--KVSSNLVDLKGENYFSCAIGQARTKARYV 769
Query: 787 LQSSDEVVSFLKKLADASSS 806
L SS++VVS L KLA A+++
Sbjct: 770 LDSSNDVVSLLHKLAVANTT 789
|
Length = 797 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 685 bits (1770), Expect = 0.0
Identities = 236/432 (54%), Positives = 292/432 (67%), Gaps = 9/432 (2%)
Query: 8 VKEFEARWIGWAGVNVPDEIGQKALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILWPL 66
+K W GW+G V ++ G+ L L K PVFL E+ V YYNG+ N+ LWPL
Sbjct: 33 LKATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPL 92
Query: 67 FHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 126
FHY P R + AY + N++FA+ + + GD+VW HDYHLM LP L
Sbjct: 93 FHYR--PDLIRYDRK-----AWEAYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAML 145
Query: 127 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 186
+E K+G+FLH PFPSSEI+RTLP R +LL +LA DLVGF TYD AR+F+SA +R
Sbjct: 146 RELGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRE 205
Query: 187 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGV 246
LG E P GVE GR RV AFPIGID +RF + VQ I EL+E+ GRK+++GV
Sbjct: 206 LGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGV 265
Query: 247 DRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 306
DRLD KG+P++LLAFE+FLEE+ +WRGKVVL+QIAVP+R DVPEYQ+L QV E+VGRI
Sbjct: 266 DRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRI 325
Query: 307 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 366
NGRFGTL PI +L+RS D L ALY DV LVT LRDGMNLV+ E+VA QD K GV
Sbjct: 326 NGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGV 385
Query: 367 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQ 426
LILSEFAGAAQ L GA+LVNP++I +A+AIARAL M EERE+RH + + Q
Sbjct: 386 LILSEFAGAAQELN-GALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQ 444
Query: 427 EWAETFVSELND 438
W E F+S+LN
Sbjct: 445 RWREDFLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 680 bits (1756), Expect = 0.0
Identities = 257/434 (59%), Positives = 318/434 (73%), Gaps = 7/434 (1%)
Query: 8 VKEFEARWIGWAGVNVPDEIGQKALTKALAEKR-CIPVFLDEDIVHQYYNGYCNNILWPL 66
+ E W+GW GV V ++ + +++ L EK C+PVFLD++ V +YYNG+ N+ILWPL
Sbjct: 41 SEATEGVWVGWPGVPVDEDEPKDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPL 100
Query: 67 FHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 126
FHY P + +S + AY+K N++FAD + + YKDGD++W HDYHLM LP+ L
Sbjct: 101 FHYRLPPNNE----DEFDRSWWDAYVKVNKLFADKIVEVYKDGDLIWVHDYHLMLLPQML 156
Query: 127 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 186
++ D K+G+FLH PFPSSEI R LP R ++LR +L ADL+GFHTYDYARHF+S C+R+
Sbjct: 157 RKRLPDAKIGFFLHIPFPSSEIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRL 216
Query: 187 LGFEGTPEG-VEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG-RKVML 244
LG E T +G VE GR V AFPIGID R L+ VQ +KEL+E F +K++L
Sbjct: 217 LGLETTSDGGVEYGGRTVSVGAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLIL 276
Query: 245 GVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVG 304
GVDRLD IKGIPQKLLAFE+FLEE +WRGKVVL+QIAVP+R DV EYQ L SQV E+VG
Sbjct: 277 GVDRLDYIKGIPQKLLAFERFLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVG 336
Query: 305 RINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK 364
RING FGTL P+HHL RSLDF L ALYA+ DV LVTSLRDGMNLV+YE+VACQ +K
Sbjct: 337 RINGEFGTLDYTPVHHLHRSLDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQDRK 396
Query: 365 GVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 424
GVLILSEFAGAAQSL GAILVNPW+I EVA AI AL MS EER+KRH F +++ H
Sbjct: 397 GVLILSEFAGAAQSLNDGAILVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHD 456
Query: 425 AQEWAETFVSELND 438
Q WAE+F+S+L
Sbjct: 457 VQYWAESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 687 bits (1774), Expect = 0.0
Identities = 285/690 (41%), Positives = 406/690 (58%), Gaps = 43/690 (6%)
Query: 12 EARWIGWAGVNV---PDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFH 68
W+GW G+++ +E + + L E +PVFL + V +YY G+CN+ LWPLFH
Sbjct: 42 GGLWVGWPGLDLEEESEEQRAR-IEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFH 100
Query: 69 YLG--LPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCL 126
Y EDR + +Y + NQ FA+ + + GDVVW HDY LM LP L
Sbjct: 101 YFPEYTEFEDRF---------WESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAML 151
Query: 127 KEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 186
+E D ++G+FLH PFPS E+ R LP R ++L +L ADL+GFHTYDY RHF+S+ R+
Sbjct: 152 RERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRV 211
Query: 187 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGV 246
LG+E + GR+ RV AFP+GID ++F + + VQ I+ L++ GRK++L +
Sbjct: 212 LGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSI 271
Query: 247 DRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 306
DRLD KGIP++LLAFE+FLE+N +WRGKV L+Q+AVP+RT VP+YQ + ++ E+VGRI
Sbjct: 272 DRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRI 331
Query: 307 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 366
NG FGT+ PIH+ RSL F L ALY DVALVT LRDGMNLV+ E+VA + GV
Sbjct: 332 NGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGV 391
Query: 367 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQ 426
LILSE AGAA L A A+LVNP +I +A AI RAL M EE+ +R + +
Sbjct: 392 LILSEMAGAAAEL-AEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVH 450
Query: 427 EWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPVDTP 486
+WA F+ EL + + + + + I RY ++ RLL+L ++ TL P
Sbjct: 451 KWASDFLDELREAAEKNKAFASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDP 510
Query: 487 GRRGDQIREMEL-KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 545
EL +L+ L L DP T + ++SG DR+ L++ F + + L AE+
Sbjct: 511 ----------ELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEH 560
Query: 546 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVE 605
G + R G+W + E + EW D+++ + E F +RTP S E++E SL W+Y+ AD E
Sbjct: 561 GAWSRAPGGEWQ--LLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPE 618
Query: 606 FGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKT 665
G +A +++ L + +SNA +EV++G+K VEVR GV KG A+ R+L
Sbjct: 619 LGEARANELILAL-SSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE--------AG 669
Query: 666 AIDYVLCIGHFLGKDEDVYAFFEPELPDDG 695
D+VL IG DED++ LP+
Sbjct: 670 PYDFVLAIGDDT-TDEDMFR----ALPETA 694
|
Length = 726 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 624 bits (1612), Expect = 0.0
Identities = 226/431 (52%), Positives = 289/431 (67%), Gaps = 9/431 (2%)
Query: 8 VKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLF 67
+K W+GW+G+ +E + T+ L E PVFL + YYNG+ N +LWPLF
Sbjct: 38 LKRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLF 97
Query: 68 HYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK 127
HY RL R + + AY++ N+ FAD + + + GD+VW HDYHL+ LP+ L+
Sbjct: 98 HY-------RLDLARFDREDWEAYVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLR 150
Query: 128 EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 187
E D ++G+FLH PFPSSEI R LP R +LLR +L ADL+GF T YAR+F+S C+R+L
Sbjct: 151 ERGPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLL 210
Query: 188 GFEGTPEGVED-QGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGV 246
G E T +G + GR RV AFPIGID + F + VQ EL+E GRK+++GV
Sbjct: 211 GLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGV 270
Query: 247 DRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 306
DRLD KGIP++LLAFE+ LE +WRGKVVL+QIAVP+RTDVPEYQ L +V E+VGRI
Sbjct: 271 DRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRI 330
Query: 307 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 366
NG+FGTL P+ +L RSL L ALY DVALVT LRDGMNLV+ E+VACQD GV
Sbjct: 331 NGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGV 390
Query: 367 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQ 426
LILSEFAGAA+ L GA+LVNP++I EVA+AI RAL M EER +RH +V TH Q
Sbjct: 391 LILSEFAGAAEELS-GALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQ 449
Query: 427 EWAETFVSELN 437
WA +F+ +L
Sbjct: 450 AWANSFLDDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 519 bits (1338), Expect = e-177
Identities = 215/432 (49%), Positives = 280/432 (64%), Gaps = 13/432 (3%)
Query: 9 KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFH 68
+ WIGW+G P + L + + E PV L ++ YYNG+ N ILWPLFH
Sbjct: 55 RVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFH 114
Query: 69 Y-LGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK 127
Y + +R + + AY+K N+ FAD + + Y+ GD++W HDYHL+ +P+ L+
Sbjct: 115 YFIDDVAYER--------NWWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVPQMLR 166
Query: 128 EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 187
E D K+G+FLH PFPSSE+ R LP R ++L +L ADL+GF T YAR+F+ C+R+L
Sbjct: 167 ERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLL 226
Query: 188 GFEGTPEGVED--QGRLTRVAAFPIGIDSERFIRALEINPVQVHIKEL-QETFAGRKVML 244
G G + + GR+ +V AFPIGID E F RAL+ VQ + EL E +K+++
Sbjct: 227 GVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIV 286
Query: 245 GVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVG 304
GVDRLD KGIPQ+LLAFE+ LEE +WRGKVVLLQIA P+R DV EYQ L Q+ E+VG
Sbjct: 287 GVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVG 346
Query: 305 RINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK 364
RING FG+L+ P+H+L R LD L ALY DV LVT LRDGMNLV+ E+VA Q K
Sbjct: 347 RINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKP 406
Query: 365 GVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 424
GVLILSEFAGAA L A++VNPW+ EVA+AI RAL MS EER++RH V TH
Sbjct: 407 GVLILSEFAGAASEL-RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHD 465
Query: 425 AQEWAETFVSEL 436
WA +F+ +L
Sbjct: 466 VARWANSFLDDL 477
|
Length = 486 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 435 bits (1120), Expect = e-140
Identities = 261/723 (36%), Positives = 393/723 (54%), Gaps = 71/723 (9%)
Query: 7 GVKEFEARWIGWAGVNV-PDEIGQKALTKALAEK-RCIPVFLDEDIVHQYYNGYCNNILW 64
G E E ++G + +E Q+ +++ L E +C+P FL D+ +YY+G+C LW
Sbjct: 101 GDDEIEVIYVGCLKEEIHLNE--QEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLW 158
Query: 65 PLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFAD----VVNKHYKDGDVVWCHDYHLM 120
PLFHY+ LP L R +S + AY+ N++FAD V+N + D VW HDYHLM
Sbjct: 159 PLFHYM-LPLSPDLGG-RFNRSLWQAYVSVNKIFADRIMEVINP---EDDFVWIHDYHLM 213
Query: 121 FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFV 180
LP L++ + +K+G+FLH+PFPSSEI++TLP R +LLRA+L +DL+GFHT+DYARHF+
Sbjct: 214 VLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFL 273
Query: 181 SACTRILGFEGTPE----GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET 236
S C+R+LG + G+E GR + P+GI + L + + +KEL +
Sbjct: 274 SCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQ 333
Query: 237 FA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQR 294
F R ++LGVD +D+ KGI KLLA E+ L ++ +W+GKVVL+QIA P R + +
Sbjct: 334 FCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKE 393
Query: 295 LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 354
+ ++ H V RIN FG PI +D L F A Y V + LVT++RDGMNL+ Y
Sbjct: 394 VQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPY 453
Query: 355 EFVACQD---------------LKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIA 399
E++ + KK +L++SEF G + SL +GAI VNPWNI VA+A+
Sbjct: 454 EYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIRVNPWNIDAVADAMD 512
Query: 400 RALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE------------AQLRI 447
AL M+ E++ RH ++ +V+TH WA +F+ +L T + R+
Sbjct: 513 SALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRV 572
Query: 448 KQVPPSLREADSIER----YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPD 503
+ P+ R+ S+E Y R+ R ++L ++ TL + ++
Sbjct: 573 VALDPNFRKL-SMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDI------- 624
Query: 504 LKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE-YNLWLAAENGMFLRCT-TGKWMTTMP 561
LN LC D + ++S R L F L +AAE+G FLR +W T +P
Sbjct: 625 ----LNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVP 680
Query: 562 EHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTG 621
+ W + V + +TE T S E +ET+LVW Y+ AD +FG QA+++L HL
Sbjct: 681 V-ADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHL-ES 738
Query: 622 PISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDE 681
++N V V G VEV+ GV+KG R+L+ + ++ D+VLCIG DE
Sbjct: 739 VLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIM---QERGMLPDFVLCIGDDR-SDE 794
Query: 682 DVY 684
D++
Sbjct: 795 DMF 797
|
Length = 854 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 270 bits (691), Expect = 6e-82
Identities = 160/452 (35%), Positives = 232/452 (51%), Gaps = 36/452 (7%)
Query: 15 WIGWAGVNVPDEIG--QKALTKALAEKRCIPVF-LDEDIVHQYYNGYCNNILWPLFHY-L 70
W GW+G E G + L K F L E +YYN + N +LWP FHY L
Sbjct: 39 WFGWSG-----ETGNEDQPLKKVKKGNITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRL 93
Query: 71 GLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN 130
L Q R A + Y++ N + AD + KD D++W HDYHL+ L++
Sbjct: 94 DLVQFQRPA--------WEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELRKRG 145
Query: 131 SDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHF---VSACTRIL 187
+ ++G+FLH PFP+ EI LP +LL + DL+GF T + F +S TR+
Sbjct: 146 VNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVT 205
Query: 188 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVD 247
G + T V +PIGI+ + I P+ + +L+ + + V+
Sbjct: 206 TRSGKSHTAWGKAFRTEV--YPIGIEPDE-IAKQAAGPLPPKLAQLKAELKNVQNIFSVE 262
Query: 248 RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRIN 307
RLD KG+P++ LA+E LE+ GK+ QIA +R DV YQ + Q+ GRIN
Sbjct: 263 RLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRIN 322
Query: 308 GRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK-GV 366
G++G L P+++L++ D L ++ +DV LVT LRDGMNLV+ E+VA QD GV
Sbjct: 323 GKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGV 382
Query: 367 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQ 426
L+LS+FAGAA L + A++VNP++ EVA A+ RAL M ER RH + +
Sbjct: 383 LVLSQFAGAANELTS-ALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDIN 441
Query: 427 EWAETFVSELNDTVVEAQLRIKQVPPSLREAD 458
W E F+S+L KQ+ P E+
Sbjct: 442 HWQECFISDL-----------KQIVPRSAESQ 462
|
Length = 474 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 269 bits (689), Expect = 2e-81
Identities = 138/457 (30%), Positives = 221/457 (48%), Gaps = 45/457 (9%)
Query: 15 WIGWAGVNVPDEIGQKALTKALAEKRCIP--VFLDEDIVHQYYNGYCNNILWPLFHYLGL 72
W+ WA + + AE + + L ++ V +Y+ WP+ H
Sbjct: 44 WVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKEQVDIFYHITSKEAFWPILH---- 99
Query: 73 PQEDRLATTRSFQSQF-------AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKC 125
+F +F ++K N+ FA+ +G VW HDY+L +P
Sbjct: 100 ----------TFPERFQFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGY 149
Query: 126 LKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTR 185
+++ D+K+ +F HTPFPS+++ LP R ++ ++L D +GFH Y +FV A
Sbjct: 150 IRQLRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARG 209
Query: 186 ILGFEGTPEGVEDQ---------------------GRLTRVAAFPIGIDSERFIRALEIN 224
++ + D R+ ++ A P+G D ER AL
Sbjct: 210 LMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAA 269
Query: 225 PVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVP 284
++ ++ ++ AG K++L +R+D KGI +KL A+E+ LE + GKV L+ VP
Sbjct: 270 SIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVP 329
Query: 285 TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 344
+ + Y L Q+ + VGRINGRF + P+ RSL + + A +A+ DV +T
Sbjct: 330 AASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITP 389
Query: 345 LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNM 404
LRDG+NLV+ E+VA Q L GVL+LSEFAGAA L GA+L NP++ + I AL M
Sbjct: 390 LRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL-KGALLTNPYDPVRMDETIYVALAM 448
Query: 405 SPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 441
E++ R F V + Q WA+ F++ ++
Sbjct: 449 PKAEQQARMREMFDAVNYYDVQRWADEFLAAVSPQAQ 485
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 237 bits (606), Expect = 9e-73
Identities = 76/221 (34%), Positives = 114/221 (51%), Gaps = 13/221 (5%)
Query: 472 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 531
L ++ TL+ V+ P L LN L DP T+ ++SG R D
Sbjct: 1 FLDYDGTLSPIVEDP---------DAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFED 51
Query: 532 KNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQR 591
F NL LAAE+G F+R G+ T + E +++W + + E +TERTP S+ E +
Sbjct: 52 LFFGVPNLGLAAEHGAFIRDPGGEDWTNLAEVEDLDWKKEVAAILEEYTERTPGSYIEDK 111
Query: 592 ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAID 651
+++L W+Y+ AD +FG QA+++ +HL + V V QG K VEVR VGV+KG A +
Sbjct: 112 KSALAWHYRNADDDFGVFQAKELAEHLESVLKDYPDVRVTQGKKVVEVRPVGVSKGKAAE 171
Query: 652 RILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELP 692
R+L E+ + D+ LCIG DED++ P
Sbjct: 172 RLLEELGSAGSP---PDFPLCIGDDRT-DEDMFDVVNPTKM 208
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 8e-26
Identities = 69/235 (29%), Positives = 110/235 (46%), Gaps = 20/235 (8%)
Query: 451 PPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNA 510
P+L+ +E YL + RLL L ++ TLTE V P E + L L
Sbjct: 1 TPALQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP--------EAAV-PDDRLLSLLQD 51
Query: 511 LCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVD 570
L DP+ + ++SG L++ F + L AE+G +R GKW + E ++ W+
Sbjct: 52 LASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLK 111
Query: 571 SLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEV 630
+ + EY+ ERTP S+ E++ ++ +Y+ A+ + G A L I+ + V
Sbjct: 112 EVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATL----INELKLRV 167
Query: 631 VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYA 685
G VE+R GV+KGAAI I+ E+ + + G L DED +A
Sbjct: 168 TPGKMVVELRPPGVSKGAAIKYIMDELPFDG------RFPIFAGDDL-TDEDAFA 215
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 7e-12
Identities = 43/196 (21%), Positives = 73/196 (37%), Gaps = 15/196 (7%)
Query: 466 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 525
+ R ++ TL+E V P + L L L P I ++SG
Sbjct: 1 ARKRAFFFDYDGTLSEIVPDPD---------AAVVSDRLLTILQKLAARPHNAIWIISGR 51
Query: 526 DRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPR 585
+ L LA E+G ++ W + E T R P
Sbjct: 52 KFLEKWLGVKLPGLGLAGEHGCEMKDNGSCQDWVNLTEKIPSWKVRANELREEITTR-PG 110
Query: 586 SHFEQRETSLVWNYKYADV-EFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGV 644
E++ +L W+Y+ A V E R +A+++ + + + +EV+ G VE++ V
Sbjct: 111 VFIERKGVALAWHYRQAPVPELARFRAKELKEKILS----FTDLEVMDGKAVVELKPRFV 166
Query: 645 TKGAAIDRILAEIVHS 660
KG + R+L S
Sbjct: 167 NKGEIVKRLLWHQPGS 182
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 1e-06
Identities = 72/312 (23%), Positives = 111/312 (35%), Gaps = 61/312 (19%)
Query: 110 DVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVG 169
DVV HD+ + + + +H E R LL+ A +
Sbjct: 87 DVVHAHDWLALLAAALAA-RLLGIPLVLTVH----GLEFGRPGNELGLLLKLARALERRA 141
Query: 170 FHTYD-------YARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALE 222
D R + G ++T + P G+D+ERF A
Sbjct: 142 LRRADRIIAVSEATREELRE-----------LGGVPPEKITVI---PNGVDTERFRPAPR 187
Query: 223 INPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 282
++ I E V+L V RL KG+ L A K +E D R +V
Sbjct: 188 AARRRLGIPE------DEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIV----- 236
Query: 283 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 342
D P + L + E+ + R + L ALYA DV ++
Sbjct: 237 ----GDGPLREELEALAAEL--GLGDRV---------TFLGFVPDEDLPALYAAADVFVL 281
Query: 343 TSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAAQSL--GAGAILVNPWNITEVANAIA 399
SL +G LV E +A G+ ++ S+ G + + G +LV P + +A AI
Sbjct: 282 PSLYEGFGLVLLEAMAA-----GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAIL 336
Query: 400 RALNMSPEEREK 411
R L+ PE R +
Sbjct: 337 RLLD-DPELRRR 347
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 49.2 bits (116), Expect = 6e-06
Identities = 67/313 (21%), Positives = 110/313 (35%), Gaps = 48/313 (15%)
Query: 104 KHYKDGDVVWCHDYHLMFLPK--CLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 161
K D++ H L L + + LH P + L LLR
Sbjct: 79 KRLLPYDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRL 138
Query: 162 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 221
+L VS + L +E G ++ P GID+E+F
Sbjct: 139 LLKRLKKALRLLADRVIAVSPALKEL--------LEALGVPNKIVVIPNGIDTEKFA--- 187
Query: 222 EINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQI 281
P ++ + G+ V+L V RLD KG+ + A K + D + L I
Sbjct: 188 ---PARIGLLP----EGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIK-----LVI 235
Query: 282 AVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 341
E ++L + + + + L L A DV +
Sbjct: 236 VGDGPERREELEKLAKK-LGLEDNV-------------KFLGYVPDEELAELLASADVFV 281
Query: 342 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAI 398
+ SL +G LV E +A G +++ G + G +LV P ++ E+A+A+
Sbjct: 282 LPSLSEGFGLVLLEAMAA-----GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADAL 336
Query: 399 ARALNMSPEEREK 411
+ L PE RE+
Sbjct: 337 EQLLED-PELREE 348
|
Length = 381 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 5e-04
Identities = 48/207 (23%), Positives = 81/207 (39%), Gaps = 37/207 (17%)
Query: 209 PIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEKF 265
GID++RF + +P + +++ V+L V RL K P L AF K
Sbjct: 160 YNGIDTDRFRK----DPAR--RLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKL 213
Query: 266 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF-GTLTAVPIHHLDRS 324
L + D + L IA D P L + + + G +
Sbjct: 214 LSDYLDIK-----LLIA----GDGPLRATLERLIKALGLSNRVKLLGLRDDIA------- 257
Query: 325 LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 384
A Y D+ +++S +G LV E +AC+ ++ ++ G + +G +
Sbjct: 258 -------AYYNAADLFVLSSAWEGFGLVVAEAMACELP----VVATDAGGVREVVGDSGL 306
Query: 385 LVNPWNITEVANAIARALNMSPEEREK 411
+V + +AN I L MS EER+
Sbjct: 307 IVPISDPEALANKIDEILKMSGEERDI 333
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 9e-04
Identities = 78/365 (21%), Positives = 110/365 (30%), Gaps = 79/365 (21%)
Query: 89 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI 148
Y++ N+ A+ D DVV HD + LP K W H ++
Sbjct: 67 EIYLEWNEENAERPLLDL-DADVVVIHDPQPLALPLFKK--KRGRPWIWRCHI-----DL 118
Query: 149 HRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAA 207
D L+ + D FH +Y V R
Sbjct: 119 SSPNRRVWDFLQPYIEDYDAAVFHLPEYVPPQVP---------------------PRKVI 157
Query: 208 FPIGID---------SERFIRA-LEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 257
P ID S I LE K + R + V R D K
Sbjct: 158 IPPSIDPLSGKNRELSPADIEYILE--------KYGIDPE--RPYITQVSRFDPWKDPFG 207
Query: 258 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 317
+ A+ K E D L + TD PE + +V E + LT P
Sbjct: 208 VIDAYRKVKERVPD-----PQLVLVGSGATDDPEGWIVYEEVLEYAE-GDPDIHVLTLPP 261
Query: 318 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAA 376
+ L+ + AL + V L S+R+G L E L KG +I G
Sbjct: 262 VSDLE-------VNALQRASTVVLQKSIREGFGLTVTE-----ALWKGKPVIAGPVGGIP 309
Query: 377 QSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-----TTHTAQEWA 429
+ G LV+ + E A I L PE R K + HV T +++
Sbjct: 310 LQIEDGETGFLVDT--VEEAAVRILYLLR-DPELRRKMGANAREHVRENFLITRHLKDYL 366
Query: 430 ETFVS 434
Sbjct: 367 YLISK 371
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 814 | |||
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| PLN02151 | 354 | trehalose-phosphatase | 100.0 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 100.0 | |
| PLN03017 | 366 | trehalose-phosphatase | 100.0 | |
| PLN02580 | 384 | trehalose-phosphatase | 100.0 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 100.0 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.95 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.95 | |
| PLN02316 | 1036 | synthase/transferase | 99.95 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.95 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.94 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.94 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.94 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.94 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.94 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.94 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.93 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.93 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.93 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.93 | |
| PLN00142 | 815 | sucrose synthase | 99.92 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.92 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.91 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.91 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.91 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.91 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.91 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.9 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.9 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.9 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.9 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.9 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.9 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.89 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.89 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.89 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.89 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.88 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.88 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.88 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.87 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.87 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.87 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.87 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.87 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.87 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.86 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.86 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.86 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.85 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.85 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.85 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.85 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.84 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.84 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.84 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.84 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.84 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.84 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.84 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.84 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.83 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.83 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.83 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.83 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.83 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.83 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.82 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.82 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.82 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.82 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.81 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.81 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.8 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.8 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.79 | |
| PLN02887 | 580 | hydrolase family protein | 99.79 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.78 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.78 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.78 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.78 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.78 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.77 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.77 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.76 | |
| PLN02423 | 245 | phosphomannomutase | 99.75 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.75 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.75 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.74 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.74 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.73 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.72 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.69 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.68 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.67 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.67 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.64 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.64 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 99.61 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.58 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.54 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.54 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.41 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.38 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.36 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.36 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.36 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.35 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.31 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.3 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.28 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.25 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.24 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.24 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.11 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.11 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.07 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.05 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.0 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.99 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.6 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 98.6 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.56 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.56 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.52 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.19 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.17 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.1 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.07 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.03 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.99 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 97.79 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.75 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 97.61 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 97.47 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.37 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 97.32 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.09 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 97.08 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 96.82 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 96.78 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.71 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.69 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.62 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.57 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.49 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 96.48 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 96.39 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 96.2 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.2 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.19 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 96.19 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 96.17 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.16 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 96.13 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 96.08 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.06 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 95.98 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.79 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 95.73 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.72 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 95.67 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 95.47 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.43 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 95.36 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 95.11 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 94.98 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 94.86 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.79 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 94.78 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 94.78 | |
| PLN02954 | 224 | phosphoserine phosphatase | 94.54 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 94.51 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 94.51 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 94.5 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 94.49 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 94.46 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 94.35 | |
| PRK06769 | 173 | hypothetical protein; Validated | 93.95 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 93.81 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 93.67 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 93.67 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 93.65 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 93.43 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 93.29 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.22 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 93.15 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 92.97 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.77 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 92.68 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 92.57 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 92.45 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 92.38 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 92.33 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 92.13 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 92.05 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 91.89 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 91.78 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 91.67 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 91.35 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 91.35 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 91.24 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 90.67 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 90.42 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 90.35 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 90.24 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 89.97 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 89.49 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 89.34 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 89.31 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 88.4 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 88.18 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 88.04 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 87.89 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 87.59 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 87.33 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 86.87 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 86.83 | |
| PRK08238 | 479 | hypothetical protein; Validated | 85.99 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 85.94 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 85.86 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 85.7 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 85.68 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 85.62 | |
| PLN02940 | 382 | riboflavin kinase | 85.56 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 84.86 | |
| PLN02954 | 224 | phosphoserine phosphatase | 84.7 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 84.6 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 84.13 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 84.07 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 83.74 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 83.39 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 83.08 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 82.81 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 81.9 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 81.82 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 81.78 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 81.78 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 81.3 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 80.15 |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-163 Score=1443.98 Aligned_cols=803 Identities=84% Similarity=1.317 Sum_probs=736.9
Q ss_pred cccCCCcCCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEeecChHHHHhHhhhhhhhccccccCCCCCCcccccccch
Q 003508 3 KLFEGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTR 82 (814)
Q Consensus 3 ~~~~~~~~~~~~wvgw~g~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~~~~~ 82 (814)
++|.++++.+++||||+|..+++++++..+...+.+|+|+||||+++++++||+||||++|||+|||++.+++++.+..+
T Consensus 126 saL~~~~~~~~~WVGw~g~~~~~~~~~~~~~~~l~~~~~~pV~l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~ 205 (934)
T PLN03064 126 SALLGVKEFEARWIGWAGVNVPDEVGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTR 205 (934)
T ss_pred HHhcccccCCeEEEeeCCCCCCCcchhHHHHHHhccCceEEEeCCHHHHHHHHHHhhhcccchhhcCcCCCccccccccc
Confidence 45677777899999999987776555666777788999999999999999999999999999999998654433322222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHH
Q 003508 83 SFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV 162 (814)
Q Consensus 83 ~~~~~w~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~l 162 (814)
.++..|++|++||++||++|+++++++|+|||||||||++|.+||+++|+++||||+|||||++|+|++||+|++||+||
T Consensus 206 ~~~~~w~~Y~~vN~~FA~~i~~~~~~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~gl 285 (934)
T PLN03064 206 SFQSQFAAYKKANQMFADVVNEHYEEGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSV 285 (934)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHH
Confidence 34445999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeE
Q 003508 163 LAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKV 242 (814)
Q Consensus 163 l~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~v 242 (814)
|+||+|||||++|++||+++|.+++|++....+++++||.++|.++|+|||++.|...+..+++.+.++.+|++++++++
T Consensus 286 L~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~ki 365 (934)
T PLN03064 286 LAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKV 365 (934)
T ss_pred hcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceE
Confidence 99999999999999999999999999988778899999999999999999999999998888999999999999999999
Q ss_pred EEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEec
Q 003508 243 MLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD 322 (814)
Q Consensus 243 il~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~ 322 (814)
||+|||||+.|||.++|+||++||++||+++++++||||+.|+|+++++|++|+.++.++|++||++||+.+|.||+|+.
T Consensus 366 IlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~ 445 (934)
T PLN03064 366 MLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLD 445 (934)
T ss_pred EEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHh
Q 003508 323 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARAL 402 (814)
Q Consensus 323 g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~~~lvnP~d~~~lA~ai~~~L 402 (814)
..++.+++.+||++|||||+||++||||||++||||||.+++|++|+|||+|++++|+.+|++|||||++++|+||.++|
T Consensus 446 ~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL 525 (934)
T PLN03064 446 RSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQAL 525 (934)
T ss_pred cCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999989999999999999999977999999999999999999999
Q ss_pred cCCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHHHhHHHhhhccccCCCCCChhHHHHHHHhccCeEEEEecCCccCCC
Q 003508 403 NMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEP 482 (814)
Q Consensus 403 ~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~s~~~li~lD~DGTL~~~ 482 (814)
+|+++||++|+++++++|.+||+.+|+++|+.+|..+......+..+..+.|+.+.++++|++++++||||||||||+|+
T Consensus 526 ~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~ 605 (934)
T PLN03064 526 NMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPQLPPEDAIQRYLQSNNRLLILGFNATLTEP 605 (934)
T ss_pred hCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhhhhccccccCCCCCHHHHHHHHHhccceEEEEecCceeccC
Confidence 99999999999999999999999999999999999887655555555668899999999999999999999999999999
Q ss_pred CCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCceEEccCcEEEEeCCCceeecccc
Q 003508 483 VDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPE 562 (814)
Q Consensus 483 ~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l~lia~hG~~i~~~~~~~~~~~~~ 562 (814)
+++|.++.+++.+..+.|+++++++|++|++++++.|+|+|||++++|++||+.++++++|+||++++..++.|....++
T Consensus 606 ~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~~w~~~~~~ 685 (934)
T PLN03064 606 VDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKGEWMTTMPE 685 (934)
T ss_pred CCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCCcceecccc
Confidence 99996445555545778999999999999999999999999999999999999999999999999999777889743323
Q ss_pred cCChHHHHHHHHHHHHHhccCCCceeeeccceEEEEeccCChhhhHHHHHHHHHHHhcCCCCCCceEEEEcCcEEEEEEC
Q 003508 563 HLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAV 642 (814)
Q Consensus 563 ~~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~~~~~~v~~g~~~vEI~p~ 642 (814)
..+..|++.+..+|++|++++||++||.|+++++||||++||+++..|+.++.++|....+.+.+++++.||++|||+|.
T Consensus 686 ~~~~~W~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~ 765 (934)
T PLN03064 686 HLNMDWVDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPV 765 (934)
T ss_pred ccchHHHHHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcC
Confidence 44668999999999999999999999999999999999999999999999999988444455668999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCC-cHHHHHhccCCCCCCCCCCCCCCCCCCcCCcchhhhhhhh-h
Q 003508 643 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGK-DEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKV-A 720 (814)
Q Consensus 643 gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~n-De~mf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 720 (814)
|+|||.|+++||+++...+....++|||+|+|| |.+ |||||+++....+..+.+++|++.+++.+.+.++++.... .
T Consensus 766 gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GD-d~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (934)
T PLN03064 766 GVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGH-FLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPS 844 (934)
T ss_pred CCCHHHHHHHHHHhhhhccccCCCCCEEEEeCC-CCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCcc
Confidence 999999999999987433322236899999999 975 9999999999888888899999999999999999998887 5
Q ss_pred ccCCcccccCCCCCCCCCCCCCCCCC--CCCCCCCCCCCccccccccCCCCceEEEEeCCCCcccccccCChHHHHHHHH
Q 003508 721 SRGSSKISQGKTQRPAQAPEKKTPNH--NCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLK 798 (814)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VG~~~s~A~~~l~~~~~v~~~L~ 798 (814)
++++++.+|.++|++..++.+...+| ..|+.+.++++..+++.++.+.+++|+|+||+|+|.|+|+|++.+||+.||+
T Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (934)
T PLN03064 845 SRSNSKNSQGKKQRSLLSSAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLK 924 (934)
T ss_pred ccccccccccccCCcccccccccccccccCCccccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHH
Confidence 58889999999999998888888887 4777888899999999999999999999999999999999999999999999
Q ss_pred HhhhccCC
Q 003508 799 KLADASSS 806 (814)
Q Consensus 799 ~l~~~~~~ 806 (814)
.|++.++.
T Consensus 925 ~~~~~~~~ 932 (934)
T PLN03064 925 ELANASSS 932 (934)
T ss_pred HHhccccC
Confidence 99987654
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-148 Score=1324.40 Aligned_cols=706 Identities=37% Similarity=0.688 Sum_probs=632.6
Q ss_pred CCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEeecChHHHHhHhhhhhhhccccccCCC-CCCcccccccchhhHHH-
Q 003508 10 EFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYL-GLPQEDRLATTRSFQSQ- 87 (814)
Q Consensus 10 ~~~~~wvgw~g~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~-~~~~~~~~~~~~~~~~~- 87 (814)
..+++||||+|..++.++++.....++++|+|+||||+++++++||+||||++|||+|||+ +..+. ....|+..
T Consensus 104 ~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~----~~~~f~~~~ 179 (854)
T PLN02205 104 EIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPD----LGGRFNRSL 179 (854)
T ss_pred cCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccchhccCCCCCcc----ccccccHHH
Confidence 3789999999987765544434356678899999999999999999999999999999999 33321 11247765
Q ss_pred HHHHHHHHHHHHHHHHHhCCC-CCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhcc
Q 003508 88 FAAYIKANQMFADVVNKHYKD-GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAAD 166 (814)
Q Consensus 88 w~~Y~~vN~~fa~~i~~~~~~-~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~D 166 (814)
|++|++||++||++|++.+++ +|+|||||||||++|.+||+++|+++||||+|||||++|+|++||+|++||+|||+||
T Consensus 180 w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aD 259 (854)
T PLN02205 180 WQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSD 259 (854)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCC
Confidence 999999999999999999998 6999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeEecHHHHHHHHHHHHHHhCcccCC----CceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhC--CC
Q 003508 167 LVGFHTYDYARHFVSACTRILGFEGTP----EGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA--GR 240 (814)
Q Consensus 167 lIgf~~~~~~~~fl~~~~~~l~~~~~~----~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~--~~ 240 (814)
+|||||++|++||++||.|++|+++.. .+++|+||.++|.++|+|||++.|......+++.+++++++++++ ++
T Consensus 260 lIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 339 (854)
T PLN02205 260 LIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDR 339 (854)
T ss_pred eEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCC
Confidence 999999999999999999999998654 357899999999999999999999999888899889999999996 68
Q ss_pred eEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003508 241 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 320 (814)
Q Consensus 241 ~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~ 320 (814)
++|++|||+|+.|||.++|+||++||++||+++++++||||+.|+|+++++|++++.+++++|++||++||+.+|.||+|
T Consensus 340 ~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~ 419 (854)
T PLN02205 340 IMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVL 419 (854)
T ss_pred EEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccC---------------CCceEEEeCCCCcccccCCceEE
Q 003508 321 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL---------------KKGVLILSEFAGAAQSLGAGAIL 385 (814)
Q Consensus 321 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~---------------~~g~vVlS~~~G~~e~lg~~~~l 385 (814)
+.+.++.+++.+||++|||+++||++||||||++||+||+.+ ++|+||+|||+||+++| .++++
T Consensus 420 ~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L-~~Ai~ 498 (854)
T PLN02205 420 IDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL-SGAIR 498 (854)
T ss_pred EecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHh-CcCeE
Confidence 999999999999999999999999999999999999999953 57999999999999999 78999
Q ss_pred ECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHHHhHHHhh-hc---------ccc-----C
Q 003508 386 VNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQ-LR---------IKQ-----V 450 (814)
Q Consensus 386 vnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~-~~---------~~~-----~ 450 (814)
|||||++++|+||.+||+||.+||++|+++++++|.+||+.+|+++||.+|..+++.+. .+ ++. .
T Consensus 499 VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~ 578 (854)
T PLN02205 499 VNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPN 578 (854)
T ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhhhccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999998866531 11 111 1
Q ss_pred CCCCChhHHHHHHHhccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHH
Q 003508 451 PPSLREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 530 (814)
Q Consensus 451 ~~~l~~~~~~~~y~~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l 530 (814)
+++|+++.+.++|+++++++||+||||||+|..+ ....|+++++++|++|++++++.|+|+|||++..|
T Consensus 579 ~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~-----------~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L 647 (854)
T PLN02205 579 FRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS-----------IDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTL 647 (854)
T ss_pred ccccCHHHHHHHHHhhcCeEEEEecCCcccCCcc-----------ccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHH
Confidence 5789999999999999999999999999998742 24578899999999999999999999999999999
Q ss_pred HHhhccc-CceEEccCcEEEEeCCC-ceeecccccCChHHHHHHHHHHHHHhccCCCceeeeccceEEEEeccCChhhhH
Q 003508 531 DKNFQEY-NLWLAAENGMFLRCTTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGR 608 (814)
Q Consensus 531 ~~~~~~~-~l~lia~hG~~i~~~~~-~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~~v~~hyr~~d~e~~~ 608 (814)
+++|+.+ +++++|+||++++..++ .|.... ...+..|++.+..+++.|++++||+++|.|+++++||||.+||+++.
T Consensus 648 ~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~-~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~ 726 (854)
T PLN02205 648 ADWFSPCEKLGIAAEHGYFLRLKRDVEWETCV-PVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGS 726 (854)
T ss_pred HHHhCCCCCeEEEEeCCEEEEeCCCceeeecc-hhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhh
Confidence 9999987 69999999999986544 686543 22356799999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHhcCCCCCCceEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhcc
Q 003508 609 IQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 609 ~~a~~l~~~l~~~~~~~~~~~v~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~ 688 (814)
.|++++..++ ...+.+.++.+..|++++||+|+++|||.|+++|++.+...+ .++|+++|||| |.|||+||++++
T Consensus 727 ~qa~el~~~l-~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g---~~~d~vl~~GD-D~nDedMF~~~~ 801 (854)
T PLN02205 727 CQAKELLDHL-ESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERG---MLPDFVLCIGD-DRSDEDMFEVIT 801 (854)
T ss_pred hhhHHHHHHH-HHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcC---CCcccEEEEcC-CccHHHHHHHhh
Confidence 8889998888 666666678899999999999999999999999987653222 56899999999 999999999996
Q ss_pred CCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCC
Q 003508 689 PELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNK 768 (814)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (814)
.... +.++ ...
T Consensus 802 ~~~~--g~~~-------------------------------------------------------------------~~~ 812 (854)
T PLN02205 802 SSMA--GPSI-------------------------------------------------------------------APR 812 (854)
T ss_pred hhcc--CCcc-------------------------------------------------------------------ccc
Confidence 3100 0000 001
Q ss_pred CceEEEEeCCCCcccccccCChHHHHHHHHHhhhccCC
Q 003508 769 ENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLADASSS 806 (814)
Q Consensus 769 ~~~~~~~VG~~~s~A~~~l~~~~~v~~~L~~l~~~~~~ 806 (814)
.++|||+||.++|+|+|||+|++||.+||+.|++.+.+
T Consensus 813 ~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~~~~ 850 (854)
T PLN02205 813 AEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASVSEQ 850 (854)
T ss_pred ccceeEEECCCCccCeEecCCHHHHHHHHHHHHhcchh
Confidence 35799999999999999999999999999999987654
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-146 Score=1316.21 Aligned_cols=744 Identities=71% Similarity=1.178 Sum_probs=646.6
Q ss_pred ccCCCcCCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEeecChHHHHhHhhhhhhhccccccCCCCCCcccccccchh
Q 003508 4 LFEGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRS 83 (814)
Q Consensus 4 ~~~~~~~~~~~wvgw~g~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~~~~~~ 83 (814)
+|.+++..+++||||+|..+.+++++..+.+.+.+++|+|||| ++++++||+||||++|||+|||++.++.+..+....
T Consensus 44 al~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~pv~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~ 122 (797)
T PLN03063 44 ALLGVKEFETKWIGWPGVDVHDEIGKAALTESLAEKGCIPVFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRT 122 (797)
T ss_pred HHHHHHhcCceEEEeCCCcCCcccchhHHHHHhhcCCeEEeeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccc
Confidence 4566656799999999987665555556677778999999999 999999999999999999999984332111111223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHh
Q 003508 84 FQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL 163 (814)
Q Consensus 84 ~~~~w~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll 163 (814)
++..|++|++||++||++|++.++++|+|||||||||++|.+||+++|+++||||+|||||++|+|++||+|++|+++||
T Consensus 123 ~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll 202 (797)
T PLN03063 123 FESQYDAYKKANRMFLDVVKENYEEGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVL 202 (797)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHh
Confidence 44559999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEE
Q 003508 164 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVM 243 (814)
Q Consensus 164 ~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vi 243 (814)
+||+|||||++|++||+++|.++++++.....+.++|+.++|.++|+|||++.|.+....+++.+....+++.++++++|
T Consensus 203 ~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lI 282 (797)
T PLN03063 203 TADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVI 282 (797)
T ss_pred cCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEE
Confidence 99999999999999999999999999877778899999999999999999999998776666667777888888899999
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecC
Q 003508 244 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 323 (814)
Q Consensus 244 l~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g 323 (814)
++||||++.||+.++|+||++|++++|+++++++||||++|+++++++|+++++++++++++||++||..+|.||+|+.+
T Consensus 283 l~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~ 362 (797)
T PLN03063 283 LGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDC 362 (797)
T ss_pred EEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhc
Q 003508 324 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALN 403 (814)
Q Consensus 324 ~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~~~lvnP~d~~~lA~ai~~~L~ 403 (814)
.++.+++.++|++|||||+||++||||||++||||||..++|++|+|+++|+++.+|.+|++|||+|++++|+||.++|+
T Consensus 363 ~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~ 442 (797)
T PLN03063 363 SVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALN 442 (797)
T ss_pred CCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998788999999999999999779999999999999999999999
Q ss_pred CCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHHHhHHHhhhccccCCCCCChhHHHHHHHhccCeEEEEecCCccCCCC
Q 003508 404 MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPV 483 (814)
Q Consensus 404 ~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~s~~~li~lD~DGTL~~~~ 483 (814)
|+++||++|+++++++|.+||+.+|+++||++|.++...+.......+++|+.+.+.++|+++++++|||||||||+++.
T Consensus 443 m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~ 522 (797)
T PLN03063 443 MSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPR 522 (797)
T ss_pred CCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCC
Confidence 99999999999999999999999999999999999877655444455678999999999999999999999999999986
Q ss_pred CCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCceEEccCcEEEEeCCCceeeccccc
Q 003508 484 DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEH 563 (814)
Q Consensus 484 ~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l~lia~hG~~i~~~~~~~~~~~~~~ 563 (814)
++|... +.+.|+++++++|++|++++++.|+|+|||++++|++||+.++++++|+||++++..++.|....+..
T Consensus 523 ~~~~~p------~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~l~aeHG~~~r~~~~~w~~~~~~~ 596 (797)
T PLN03063 523 NSQIKE------MDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEH 596 (797)
T ss_pred CCcccc------ccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCCcEEEeCCEEEecCCCceeeccccc
Confidence 643100 45789999999999999999999999999999999999999899999999999997677897543233
Q ss_pred CChHHHHHHHHHHHHHhccCCCceeeeccceEEEEeccCChhhhHHHHHHHHHHHhcCCCCCCceEEEEcCcEEEEEECC
Q 003508 564 LNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVG 643 (814)
Q Consensus 564 ~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~~~~~~v~~g~~~vEI~p~g 643 (814)
.+..|++.+.++|+.|++++||++||.|+++++||||++||+++..|+.++..+|.+..+.+.+++++.||+++||+|.|
T Consensus 597 ~~~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~g 676 (797)
T PLN03063 597 MNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIG 676 (797)
T ss_pred cChhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCC
Confidence 45689999999999999999999999999999999999999999889999998883334455679999999999999999
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCC-CcHHHHHhccCCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhcc
Q 003508 644 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG-KDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASR 722 (814)
Q Consensus 644 vnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~-nDe~mf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 722 (814)
+|||.|+++||+++...+....++|||+|+|| |. +||+||+++....... + . .
T Consensus 677 vnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gd-d~~~DEdmF~~l~~~~~~~-----------------~-------~-~ 730 (797)
T PLN03063 677 VTKGAAIGRILGEIVHNKSMTTPIDFVFCSGY-FLEKDEDVYTFFEPEILSK-----------------K-------K-S 730 (797)
T ss_pred CChHHHHHHHHHHhhhccccCCCCCEEEEeCC-CCCCcHHHHHhcccccccc-----------------c-------c-c
Confidence 99999999999987322111135799999999 85 5999999996410000 0 0 0
Q ss_pred CCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCceEEEEeCCCCcccccccCChHHHHHHHHHhhh
Q 003508 723 GSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKKLAD 802 (814)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VG~~~s~A~~~l~~~~~v~~~L~~l~~ 802 (814)
.+++.+.+. ++.+ +++. .......|+|+||+++|+|+|||+|++||.++|+.|++
T Consensus 731 ~~~~~~~~~---------~~~~-----~~~~-----------~~~~~~~~~v~VG~~~s~A~y~l~~~~eV~~lL~~l~~ 785 (797)
T PLN03063 731 SSSNYSDSD---------KKVS-----SNLV-----------DLKGENYFSCAIGQARTKARYVLDSSNDVVSLLHKLAV 785 (797)
T ss_pred ccccccccc---------cccc-----cccc-----------ccccCceEEEEECCCCccCeecCCCHHHHHHHHHHHhc
Confidence 000000000 0000 0100 11124689999999999999999999999999999998
Q ss_pred ccC
Q 003508 803 ASS 805 (814)
Q Consensus 803 ~~~ 805 (814)
...
T Consensus 786 ~~~ 788 (797)
T PLN03063 786 ANT 788 (797)
T ss_pred cCc
Confidence 654
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-133 Score=1206.61 Aligned_cols=689 Identities=42% Similarity=0.750 Sum_probs=630.4
Q ss_pred ccCCC-cCCCcEEEEeCCCCCCCc--hhhHHHHHhhcCccEEEeecChHHHHhHhhhhhhhccccccCCCCCCccccccc
Q 003508 4 LFEGV-KEFEARWIGWAGVNVPDE--IGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLAT 80 (814)
Q Consensus 4 ~~~~~-~~~~~~wvgw~g~~~~~~--~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~~~ 80 (814)
+|.++ +..+++||||+|...+.+ +++..+...+.+|+|+||||++++++.||+||||++|||+|||++...
T Consensus 33 ~l~~~~~~~~~~wvg~~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~y~gf~n~~lWp~~H~~~~~~------ 106 (726)
T PRK14501 33 GLRSFHERGGGLWVGWPGLDLEEESEEQRARIEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYT------ 106 (726)
T ss_pred HHHHHhhcCCeEEEEeCCCCccccchhhhhhhhhhccCceEEEEeCCHHHHHHHHHHhhhccccchhcccCccc------
Confidence 45555 678999999999765542 233344566789999999999999999999999999999999985332
Q ss_pred chhhHHH-HHHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHH
Q 003508 81 TRSFQSQ-FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL 159 (814)
Q Consensus 81 ~~~~~~~-w~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il 159 (814)
.|++. |++|++||++||++|++.++++|+|||||||||++|.+||++.|+++||||+|+|||++++|+++|++++|+
T Consensus 107 --~~~~~~w~~Y~~vN~~fA~~~~~~~~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll 184 (726)
T PRK14501 107 --EFEDRFWESYERVNQRFAEAIAAIARPGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFEVFRLLPWREEIL 184 (726)
T ss_pred --CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHH
Confidence 36655 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCC
Q 003508 160 RAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG 239 (814)
Q Consensus 160 ~~ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~ 239 (814)
++||+||+||||+++|++||+++|.++++++.....+++.|+.++|.++|+|||++.|.+....+++.+..+.+|+.+++
T Consensus 185 ~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~ 264 (726)
T PRK14501 185 EGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRG 264 (726)
T ss_pred HHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999877667889999999999999999999999887777777777788888889
Q ss_pred CeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003508 240 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 319 (814)
Q Consensus 240 ~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~ 319 (814)
+++|++|||+++.||+..+|+||++|++++|+++++++|+||+.|+|.+.++|+++++++++++++||++||+.+|.||+
T Consensus 265 ~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~ 344 (726)
T PRK14501 265 RKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIH 344 (726)
T ss_pred CEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEE
Confidence 99999999999999999999999999999999999999999999998877999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHH
Q 003508 320 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIA 399 (814)
Q Consensus 320 ~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~~~lvnP~d~~~lA~ai~ 399 (814)
++.+.+++++++++|++|||||+||++||||||++|||||+.+++|++|+|+++|+++++ .+|++|||+|++++|++|.
T Consensus 345 ~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l-~~~llv~P~d~~~la~ai~ 423 (726)
T PRK14501 345 YFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL-AEALLVNPNDIEGIAAAIK 423 (726)
T ss_pred EEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHh-CcCeEECCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999998778999999999999998 6799999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHHHhHHHhhhccccCCCCCChhHHHHHHHhccCeEEEEecCCcc
Q 003508 400 RALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATL 479 (814)
Q Consensus 400 ~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~s~~~li~lD~DGTL 479 (814)
++|+|+.+|+++|++++++++.+||+.+|+++|+..+.++.+.+.......++.|+++.+.++|++++++||+|||||||
T Consensus 424 ~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL 503 (726)
T PRK14501 424 RALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAFASKPITPAAAEEIIARYRAASRRLLLLDYDGTL 503 (726)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhccccccCCccCHHHHHHHHHhccceEEEEecCccc
Confidence 99999999999999999999999999999999999999987654322223346789999999999999999999999999
Q ss_pred CCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCceEEccCcEEEEeCCCceeec
Q 003508 480 TEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTT 559 (814)
Q Consensus 480 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l~lia~hG~~i~~~~~~~~~~ 559 (814)
++...+| ....++++++++|++|++++++.|+|+|||+...++++|+.+++++||+||++++..++.|...
T Consensus 504 ~~~~~~~---------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~ 574 (726)
T PRK14501 504 VPFAPDP---------ELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLL 574 (726)
T ss_pred cCCCCCc---------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEEC
Confidence 9987777 4677899999999999998899999999999999999999889999999999999777788764
Q ss_pred ccccCChHHHHHHHHHHHHHhccCCCceeeeccceEEEEeccCChhhhHHHHHHHHHHHhcCCCCCCceEEEEcCcEEEE
Q 003508 560 MPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEV 639 (814)
Q Consensus 560 ~~~~~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~~~~~~v~~g~~~vEI 639 (814)
. ..+..|++.+.++++.+.++++|+++|.|+.+++|||++++++++..+++++...+ ...+.+.++.+..|+.++||
T Consensus 575 ~--~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l-~~~~~~~~~~v~~g~~~veV 651 (726)
T PRK14501 575 E--PVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILAL-SSLLSNAPLEVLRGNKVVEV 651 (726)
T ss_pred C--CcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHH-HHHhcCCCeEEEECCeEEEE
Confidence 3 13568999999999999999999999999999999999999999888888888888 66666677888999999999
Q ss_pred EECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccCCCCCCCCCCCCCCCCCCcCCcchhhhhhhh
Q 003508 640 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKV 719 (814)
Q Consensus 640 ~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 719 (814)
+|+++|||.|+++|++. .++++++|||| |.|||+||+.+..
T Consensus 652 ~p~~vnKG~al~~ll~~--------~~~d~vl~~GD-~~nDe~Mf~~~~~------------------------------ 692 (726)
T PRK14501 652 RPAGVNKGRAVRRLLEA--------GPYDFVLAIGD-DTTDEDMFRALPE------------------------------ 692 (726)
T ss_pred EECCCCHHHHHHHHHhc--------CCCCEEEEECC-CCChHHHHHhccc------------------------------
Confidence 99999999999999983 35899999999 9999999998742
Q ss_pred hccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCceEEEEeCCCCcccccccCChHHHHHHHHH
Q 003508 720 ASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLKK 799 (814)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VG~~~s~A~~~l~~~~~v~~~L~~ 799 (814)
.+++|+||.++|.|+|+|++++||..+|+.
T Consensus 693 --------------------------------------------------~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~ 722 (726)
T PRK14501 693 --------------------------------------------------TAITVKVGPGESRARYRLPSQREVRELLRR 722 (726)
T ss_pred --------------------------------------------------CceEEEECCCCCcceEeCCCHHHHHHHHHH
Confidence 369999999999999999999999999999
Q ss_pred hhh
Q 003508 800 LAD 802 (814)
Q Consensus 800 l~~ 802 (814)
|++
T Consensus 723 l~~ 725 (726)
T PRK14501 723 LLD 725 (726)
T ss_pred Hhc
Confidence 874
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-110 Score=967.29 Aligned_cols=683 Identities=46% Similarity=0.811 Sum_probs=626.4
Q ss_pred cCCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEeecChHHHHhHhhhhhhhccccccCCCCCCcccccccchhhHHH-
Q 003508 9 KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQ- 87 (814)
Q Consensus 9 ~~~~~~wvgw~g~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~~~~~~~~~~- 87 (814)
+..+..||||.|..++++++.......+..++|+||+++++....+|++||+++|||+|||+..+..... ..|...
T Consensus 43 ~~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~---~~~~~~~ 119 (732)
T KOG1050|consen 43 REMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFLDDELFDSYYNGYCKSILWPLFHYMLIPSEPAF---KLFDLEL 119 (732)
T ss_pred ccceeeEEeeccccCchhhHhHhhhhhhhhcCceeeecCCchhhhhhhhhhhhcccceeecccCCCchhh---hhhHHHH
Confidence 5677999999997777777666677788899999999999999999999999999999999932221111 124444
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccE
Q 003508 88 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADL 167 (814)
Q Consensus 88 w~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~Dl 167 (814)
|.+|+.+|++||+++++.++++|+|||||||||++|.++|++..+++|+||+|.|||++|+|+++|.+++|+++|+++|+
T Consensus 120 w~~y~~~n~~f~d~ive~~~~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~ 199 (732)
T KOG1050|consen 120 WKAYVKVNQAFADKIVEVYEEGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDL 199 (732)
T ss_pred HHHHHHHhHHHHHHHHHhccCCCcEEEEcchhhccchhhhcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeEecHHHHHHHHHHHHHHhCcccC----CCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEE
Q 003508 168 VGFHTYDYARHFVSACTRILGFEGT----PEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVM 243 (814)
Q Consensus 168 Igf~~~~~~~~fl~~~~~~l~~~~~----~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vi 243 (814)
|+||+++|++||+++|.|+++++.. ..++.++||.+.|.++|+|||+.+|......+.+..+..+++..++++++|
T Consensus 200 i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~kli 279 (732)
T KOG1050|consen 200 LGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLI 279 (732)
T ss_pred cccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceE
Confidence 9999999999999999999999866 356889999999999999999999999888888889999999999999999
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecC
Q 003508 244 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 323 (814)
Q Consensus 244 l~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g 323 (814)
++|||+|+.||+..++.||++++++||+++++++|+||+.|+++++++|++++.++..++.+||.+||...+.||+++..
T Consensus 280 lgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~ 359 (732)
T KOG1050|consen 280 LGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLK 359 (732)
T ss_pred ecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhc
Q 003508 324 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALN 403 (814)
Q Consensus 324 ~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~~~lvnP~d~~~lA~ai~~~L~ 403 (814)
.++..++.++|.+||+++++|+++||||+++||++|+.++.+++|+|+|.|+.+.++++++++||||.++++.+|..+|+
T Consensus 360 ~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~ 439 (732)
T KOG1050|consen 360 DLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALT 439 (732)
T ss_pred cCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999998888999999999999999889999999999999999999999
Q ss_pred CCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHHHhHHHhhhccccCCCCCChhHHHHHHHhccCeEEEEecCCccCCCC
Q 003508 404 MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERYLRSNNRLLILGFNATLTEPV 483 (814)
Q Consensus 404 ~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~~~~~~~~l~~~~~~~~y~~s~~~li~lD~DGTL~~~~ 483 (814)
|+.+++..|+...+.++..|+...|+..|+..+.+..+...+. ..+.+.|..+.+++.|+++++|+|++|||||+++..
T Consensus 440 ~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~~~~~-~~~~~~l~~~~~i~~y~~s~~rli~ldyd~t~~~~~ 518 (732)
T KOG1050|consen 440 MSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKVGFLG-FRVTPLLTAEHIVSDYKKSKKRLILLDYDLTLIPPR 518 (732)
T ss_pred cCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhhcccc-cccccccChhHhhhhhhhccceEEEecccccccCCC
Confidence 9999999999999999999999999999999888877665532 334455889999999999999999999998888652
Q ss_pred CCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhccc-CceEEccCcEEEEeCCCceeecccc
Q 003508 484 DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-NLWLAAENGMFLRCTTGKWMTTMPE 562 (814)
Q Consensus 484 ~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~-~l~lia~hG~~i~~~~~~~~~~~~~ 562 (814)
| ..+...|+.|+.||+|.|+|+|||+...++.|+... ++|++||||+++|.+++ |.+..
T Consensus 519 --~---------------~~~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~-w~~~~-- 578 (732)
T KOG1050|consen 519 --S---------------IKAISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK-WETCV-- 578 (732)
T ss_pred --C---------------chHHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc-eeeec--
Confidence 2 119999999999999999999999999999998776 89999999999998766 98765
Q ss_pred cCChHHHHHHHHHHHHHhccCCCceeeeccceEEEEeccCChhhhHHHHHHHHHHHhcCCCCCCceEEEEcCcEEEEEEC
Q 003508 563 HLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAV 642 (814)
Q Consensus 563 ~~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~~~~~~v~~g~~~vEI~p~ 642 (814)
.+.+|++.+.+++++|++||||+++|.|+.+++|||++++|+++..||+++..+| .. .+.++++..|+..|||+|.
T Consensus 579 -~~~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l-~~--~~~~~~v~~g~~~Vev~~~ 654 (732)
T KOG1050|consen 579 -LDLDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRNADPEFGELQAKELLEHL-ES--KNEPVEVVRGKHIVEVRPQ 654 (732)
T ss_pred -ccccHHHHHHHHHHHHHhcCCCceecccCceEEEeeeccCcchhHHHHHHHHHHh-cc--cCCCeEEEecCceEEEccc
Confidence 5778999999999999999999999999999999999999999999999999999 55 6778999999999999999
Q ss_pred CCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccCCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhcc
Q 003508 643 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASR 722 (814)
Q Consensus 643 gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 722 (814)
|++||.++.+++..+. .++|+++|+|| |.+||+||+++.......
T Consensus 655 gvsk~~~~~~~~~~~~------~~~df~~c~g~-d~tDed~~~~~~~~~~~~---------------------------- 699 (732)
T KOG1050|consen 655 GVSKGLAAERILSEMV------KEPDFVLCIGD-DRTDEDMFEFISKAKDPE---------------------------- 699 (732)
T ss_pred ccchHHHHHHHHHhcC------CCcceEEEecC-CCChHHHHHHHhhccCCc----------------------------
Confidence 9999999999999876 36899999999 999999999997631100
Q ss_pred CCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCceEEEEeCCCCcccccccCChHHHHHHHH
Q 003508 723 GSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQSSDEVVSFLK 798 (814)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VG~~~s~A~~~l~~~~~v~~~L~ 798 (814)
.....|+|+||.++|.|.|++.+++||..+|+
T Consensus 700 --------------------------------------------~~~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 700 --------------------------------------------KVEEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred --------------------------------------------ccceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 00368999999999999999999999999885
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-105 Score=889.20 Aligned_cols=425 Identities=35% Similarity=0.618 Sum_probs=394.1
Q ss_pred ccCCC-cCCCcEEEEeCCCCCCCchhhHHHHHhh-cCccEEEeecChHHHHhHhhhhhhhccccccCCCCCCcccccccc
Q 003508 4 LFEGV-KEFEARWIGWAGVNVPDEIGQKALTKAL-AEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATT 81 (814)
Q Consensus 4 ~~~~~-~~~~~~wvgw~g~~~~~~~~~~~~~~~~-~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~~~~ 81 (814)
+|.++ ++.+|+||||+|....+ ++ .+.... .+++|.||+|+++++++||+||||++|||+|||++...
T Consensus 27 aL~~~l~~~~g~WvGW~g~~~~~-~~--~~~~~~~~~~~~~~v~L~~~~~~~yY~gfsn~~LWPlfHy~~~~~------- 96 (474)
T PRK10117 27 GILGALKAAGGLWFGWSGETGNE-DQ--PLKKVKKGNITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLV------- 96 (474)
T ss_pred HHHHHHHhcCceEEEecCCCCCC-cc--cchhhhcCCceEEEecCCHHHHHHHHhhhhhcchhhhhCCCCCcc-------
Confidence 56666 77899999999964332 11 133332 56999999999999999999999999999999995332
Q ss_pred hhhHHH-HHHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHH
Q 003508 82 RSFQSQ-FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR 160 (814)
Q Consensus 82 ~~~~~~-w~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~ 160 (814)
.|+.. |++|++||++||++|++.++++|+|||||||||++|.+||+++|+++||||+|||||++|+|++||++++|++
T Consensus 97 -~~~~~~w~~Y~~VN~~FA~~v~~~~~~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~ 175 (474)
T PRK10117 97 -QFQRPAWEGYLRVNALLADKLLPLLKDDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPPHDELLE 175 (474)
T ss_pred -CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCChHHHhhCCChHHHHH
Confidence 36654 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccEEeEecHHHHHHHHHHHHHHhCcccCC-CceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCC
Q 003508 161 AVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG 239 (814)
Q Consensus 161 ~ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~-~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~ 239 (814)
|||+||+|||||++|++||+++|.+++|++... ..+.++|+.++|.++|+|||++.|...+..+ ..+..+++|+.+++
T Consensus 176 glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~ 254 (474)
T PRK10117 176 QLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKN 254 (474)
T ss_pred HHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCC
Confidence 999999999999999999999999999987643 4567889999999999999999999877654 46678889999999
Q ss_pred CeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003508 240 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 319 (814)
Q Consensus 240 ~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~ 319 (814)
+++|++||||||+|||+++|+||++||++||+++++++|+||+.|+|+++++|++++++++++|++||++||+.+|.||+
T Consensus 255 ~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~ 334 (474)
T PRK10117 255 VQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLY 334 (474)
T ss_pred CeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhcc-CCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHH
Q 003508 320 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAI 398 (814)
Q Consensus 320 ~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~-~~~g~vVlS~~~G~~e~lg~~~~lvnP~d~~~lA~ai 398 (814)
|++..++++++.++|++|||+++||++||||||++||+|||. +++|+||+|||+|++++| .+|++|||||++++|+||
T Consensus 335 y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L-~~AllVNP~d~~~~A~Ai 413 (474)
T PRK10117 335 YLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL-TSALIVNPYDRDEVAAAL 413 (474)
T ss_pred EecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccchHHHh-CCCeEECCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999996 788999999999999999 789999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHHHhHH
Q 003508 399 ARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 441 (814)
Q Consensus 399 ~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~ 441 (814)
.+||+||.+||++|+++++++|.+||+.+|+++||.+|..+..
T Consensus 414 ~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~ 456 (474)
T PRK10117 414 DRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVP 456 (474)
T ss_pred HHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999988753
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-104 Score=890.27 Aligned_cols=426 Identities=32% Similarity=0.615 Sum_probs=393.5
Q ss_pred ccCCC--cCCCcEEEEeCCCCCCCchh-hHHHH-HhhcCccEEEeecChHHHHhHhhhhhhhccccccCCCCCCcccccc
Q 003508 4 LFEGV--KEFEARWIGWAGVNVPDEIG-QKALT-KALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLA 79 (814)
Q Consensus 4 ~~~~~--~~~~~~wvgw~g~~~~~~~~-~~~~~-~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~~ 79 (814)
+|.++ +..+|+||||+|...+++++ ...+. ....+++|.||+|+++++++||+||||++|||+|||++...
T Consensus 31 al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~----- 105 (487)
T TIGR02398 31 TLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKEQVDIFYHITSKEAFWPILHTFPERF----- 105 (487)
T ss_pred HHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHHHHHHHHhhhhhccccccccCCcccc-----
Confidence 45555 34679999999975322111 11111 22356999999999999999999999999999999986432
Q ss_pred cchhhHHH-HHHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHH
Q 003508 80 TTRSFQSQ-FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL 158 (814)
Q Consensus 80 ~~~~~~~~-w~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~i 158 (814)
.|+.. |++|++||++||++|++.++++|+|||||||||++|.+||+++|+++||||+|||||++|+|++||++++|
T Consensus 106 ---~~~~~~w~~Y~~vN~~FA~~i~~~~~~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~eifr~LP~r~~l 182 (487)
T TIGR02398 106 ---QFREDDWQVFLKVNRAFAEAACLEAAEGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPWREQI 182 (487)
T ss_pred ---CcCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCChHHHhhCCchHHH
Confidence 36655 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccEEeEecHHHHHHHHHHHHHHhCcccCCC---------------------ceeeCCeEEEEEEeecccChhhh
Q 003508 159 LRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE---------------------GVEDQGRLTRVAAFPIGIDSERF 217 (814)
Q Consensus 159 l~~ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~---------------------~~~~~g~~~~i~v~p~GId~~~f 217 (814)
|+|||+||+|||||++|++||++||.+++|++.... ++.++||.++|.++|+|||++.|
T Consensus 183 l~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f 262 (487)
T TIGR02398 183 IGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERI 262 (487)
T ss_pred HHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHH
Confidence 999999999999999999999999999999865321 37788999999999999999999
Q ss_pred hhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHH
Q 003508 218 IRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTS 297 (814)
Q Consensus 218 ~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~ 297 (814)
.+....+++.+..+.+|++++++++|++|||||+.|||+++|+||++||++||+++++++||||+.|+|+++++|+++++
T Consensus 263 ~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~ 342 (487)
T TIGR02398 263 RSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQG 342 (487)
T ss_pred HHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHH
Confidence 98888888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccc
Q 003508 298 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ 377 (814)
Q Consensus 298 ~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e 377 (814)
+++++|++||++||+.+|.||+|+++.++.+++.+||++||||++||++||||||++||||||.+++|+||+|+|+|+++
T Consensus 343 ~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~ 422 (487)
T TIGR02398 343 QIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAV 422 (487)
T ss_pred HHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred ccCCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHHH
Q 003508 378 SLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 438 (814)
Q Consensus 378 ~lg~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 438 (814)
++ .+|++|||||++++|++|.+||+||.+||++|+++++++|.+||+.+|+++||.+|..
T Consensus 423 ~l-~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 423 EL-KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred hc-CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 99 8899999999999999999999999999999999999999999999999999998864
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-102 Score=883.01 Aligned_cols=430 Identities=53% Similarity=0.932 Sum_probs=343.7
Q ss_pred ccCCC-cCCCcEEEEeCCCCCCCch--hhHHHHHhhcCccEEEeecChHHHHhHhhhhhhhccccccCCCCC-Ccccccc
Q 003508 4 LFEGV-KEFEARWIGWAGVNVPDEI--GQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGL-PQEDRLA 79 (814)
Q Consensus 4 ~~~~~-~~~~~~wvgw~g~~~~~~~--~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~-~~~~~~~ 79 (814)
+|.++ ++.+++||||+|...+.++ ++........+++|+||||+++++++||+||||++|||+|||... .+
T Consensus 37 al~~l~~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~----- 111 (474)
T PF00982_consen 37 ALDPLLKKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPVFLSPEEYDGYYNGFCNQVLWPLFHYRLDSRP----- 111 (474)
T ss_dssp HHHHHHHHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEEEE-HHHHHHHTTTHHHHTHHHHHTT-GG--------
T ss_pred HHHHHHhcCCCEEEEeCCCcCccccccccchhhhcccCceEEEEEcCHHHHHHHHHhhhhhccCccccccccccc-----
Confidence 45556 5589999999998766544 222223456789999999999999999999999999999998732 11
Q ss_pred cchhhHHH-HHHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHH
Q 003508 80 TTRSFQSQ-FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL 158 (814)
Q Consensus 80 ~~~~~~~~-w~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~i 158 (814)
....|+.. |++|++||++||++|++.++++|+|||||||||++|++||+++|+++||||+|||||++|+|++||++++|
T Consensus 112 ~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~ei 191 (474)
T PF00982_consen 112 DLARFEEEWWEAYKRVNRRFADAIAEVYRPGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSSEIFRCLPWREEI 191 (474)
T ss_dssp -G----HHHHHHHHHHHHHHHHHHGGG--TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----HHHHTTSTTHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHhCcCCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCHHHHhhCCcHHHH
Confidence 11246655 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccEEeEecHHHHHHHHHHHHHHhCcccCCC--ceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHH
Q 003508 159 LRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPE--GVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET 236 (814)
Q Consensus 159 l~~ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~--~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~ 236 (814)
|+|||+||+||||+++|++||+++|.+++|+++... .+.++||.++|.++|+|||++.|...+.++++.++.++++++
T Consensus 192 L~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~ 271 (474)
T PF00982_consen 192 LRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREK 271 (474)
T ss_dssp HHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHH
T ss_pred HHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHh
Confidence 999999999999999999999999999999886654 799999999999999999999999998889999999999999
Q ss_pred hCC-CeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCc
Q 003508 237 FAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 315 (814)
Q Consensus 237 ~~~-~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~ 315 (814)
+++ +++|++|||+|+.|||.++|+||++||++||+++++++|+||+.|+|++.++|++++++++++|++||++||+.+|
T Consensus 272 ~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~ 351 (474)
T PF00982_consen 272 FKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDW 351 (474)
T ss_dssp TTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB
T ss_pred cCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCc
Confidence 988 5999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHH
Q 003508 316 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVA 395 (814)
Q Consensus 316 ~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~~~lvnP~d~~~lA 395 (814)
+||+|+.+.++.+++.+||+.|||+++||++||||||++||+|||.+++|++|+|||+|++++|++++++|||||++++|
T Consensus 352 ~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A 431 (474)
T PF00982_consen 352 TPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSEAALLVNPWDIEEVA 431 (474)
T ss_dssp -SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TTS-EEE-TT-HHHHH
T ss_pred eeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHcCCccEEECCCChHHHH
Confidence 99999999999999999999999999999999999999999999988899999999999999996688999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHHH
Q 003508 396 NAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELND 438 (814)
Q Consensus 396 ~ai~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 438 (814)
+||.+||+||++||++|+++++++|.++|+.+|+++||++|++
T Consensus 432 ~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 432 DAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-99 Score=833.67 Aligned_cols=426 Identities=50% Similarity=0.889 Sum_probs=395.1
Q ss_pred ccCCC-cCCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEeecChHHHHhHhhhhhhhccccccCCCCCCcccccccch
Q 003508 4 LFEGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTR 82 (814)
Q Consensus 4 ~~~~~-~~~~~~wvgw~g~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~~~~~ 82 (814)
+|+++ +..+++||||+|...+.++-.........++...||.++.+++++||++|||.+|||+|||+....
T Consensus 49 ~l~~~~~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~~-------- 120 (486)
T COG0380 49 ALKPLLRVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDDV-------- 120 (486)
T ss_pred hcchhhHhhcceEEecCceeccccccchhhhhccccceEEEEecCHHHHHHHHHHhhHhhhcceeeeecCcc--------
Confidence 45666 678999999999877522223344455568999999999999999999999999999999994322
Q ss_pred hhHHH-HHHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHH
Q 003508 83 SFQSQ-FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 161 (814)
Q Consensus 83 ~~~~~-w~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ 161 (814)
.|+++ |+.|++||++||++|++.++++|+||||||||+++|.+||++.|+++||||+|+|||++|+|+|||+|++|++|
T Consensus 121 ~~~~~~w~~Y~~vN~~FAd~i~~~~~~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~g 200 (486)
T COG0380 121 AYERNWWDAYVKVNRKFADKIVEIYEPGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEG 200 (486)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHH
Confidence 36665 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccEEeEecHHHHHHHHHHHHHHhCcccCCCcee---eCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhC
Q 003508 162 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE---DQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA 238 (814)
Q Consensus 162 ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~---~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~ 238 (814)
|++||+||||+++|++||+.+|+++++.... ..+. ++|+.+++..+|+|||+..|......+.+..++.++++.+.
T Consensus 201 ll~~dligFqt~~y~~nF~~~~~r~~~~~~~-~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~ 279 (486)
T COG0380 201 LLGADLIGFQTESYARNFLDLCSRLLGVTGD-ADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELG 279 (486)
T ss_pred hhcCCeeEecCHHHHHHHHHHHHHhcccccc-ccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhc
Confidence 9999999999999999999999999986521 1222 44799999999999999999998888888788889998887
Q ss_pred C-CeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003508 239 G-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 317 (814)
Q Consensus 239 ~-~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~ 317 (814)
+ +++|++|||+|+.||++.+++||++||++||+++++++|+||+.|+|++.++|+.++.+++++|++||++||+.+|+|
T Consensus 280 ~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~P 359 (486)
T COG0380 280 RNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTP 359 (486)
T ss_pred CCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcce
Confidence 6 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHH
Q 003508 318 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANA 397 (814)
Q Consensus 318 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~~~lvnP~d~~~lA~a 397 (814)
|+|++..++.+++.+||+.||++++||++||||||++||+|||.+++|++|+|+|+|++.+| .++++|||||.+++|++
T Consensus 360 v~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L-~~AliVNP~d~~~va~a 438 (486)
T COG0380 360 VHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL-RDALIVNPWDTKEVADA 438 (486)
T ss_pred eEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhh-ccCEeECCCChHHHHHH
Confidence 99999999999999999999999999999999999999999999889999999999999999 77999999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHHHh
Q 003508 398 IARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 439 (814)
Q Consensus 398 i~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 439 (814)
|.+||+|+.+||++|++.+++.|.+||+++|+++|+.+|...
T Consensus 439 i~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 439 IKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLAQA 480 (486)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999863
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-96 Score=830.09 Aligned_cols=425 Identities=55% Similarity=0.918 Sum_probs=395.2
Q ss_pred ccCCC-cCCCcEEEEeCCCCCCCchhhHHHH-HhhcCccEEEeecChHHHHhHhhhhhhhccccccCCCCCCcccccccc
Q 003508 4 LFEGV-KEFEARWIGWAGVNVPDEIGQKALT-KALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATT 81 (814)
Q Consensus 4 ~~~~~-~~~~~~wvgw~g~~~~~~~~~~~~~-~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~~~~ 81 (814)
+|.++ +..+++||||+|...++++++..+. ....+++|+||||++++++.||+||||++|||+|||++...
T Consensus 28 al~~~~~~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~y~gf~n~~lWPl~H~~~~~~------- 100 (456)
T TIGR02400 28 ALLGALKATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDLI------- 100 (456)
T ss_pred HHHHHHhccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECCHHHHHHHHHHhhhhhcchhhccccccc-------
Confidence 45555 6679999999998665433323333 45578999999999999999999999999999999995432
Q ss_pred hhhHHH-HHHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHH
Q 003508 82 RSFQSQ-FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR 160 (814)
Q Consensus 82 ~~~~~~-w~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~ 160 (814)
.|+.. |++|++||++||++|.+.++++|+|||||||||++|.+||++.|+++||||+|||||++|+|+++|+|++|++
T Consensus 101 -~~~~~~w~~Y~~vN~~fA~~i~~~~~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~~e~f~~lp~r~~il~ 179 (456)
T TIGR02400 101 -RYDRKAWEAYRRVNRLFAEALAPLLQPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSSEIYRTLPWRRELLE 179 (456)
T ss_pred -ccCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCCcHHHHHH
Confidence 36655 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCC
Q 003508 161 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 240 (814)
Q Consensus 161 ~ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~ 240 (814)
|||+||+|||||++|++||+.+|.+++|++....++.+.|+.++|.++|+|||++.|.+....+++.+..+.+|++++++
T Consensus 180 gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~ 259 (456)
T TIGR02400 180 GLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGR 259 (456)
T ss_pred HHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999888888889999999999999999999998877777777788899999999
Q ss_pred eEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003508 241 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 320 (814)
Q Consensus 241 ~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~ 320 (814)
++|++|||+++.||++.+|+||++|++++|+++++++|+|+++|+++++++|+++++++++++++||++||..+|.||++
T Consensus 260 ~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~ 339 (456)
T TIGR02400 260 KLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRY 339 (456)
T ss_pred eEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHH
Q 003508 321 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIAR 400 (814)
Q Consensus 321 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~~~lvnP~d~~~lA~ai~~ 400 (814)
+.+.++.+++.++|++|||||+||++||||||++|||||+..++|++|+|+++|+++++ .+|++|||+|++++|+||.+
T Consensus 340 l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l-~~gllVnP~d~~~lA~aI~~ 418 (456)
T TIGR02400 340 LNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQEL-NGALLVNPYDIDGMADAIAR 418 (456)
T ss_pred EcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHh-CCcEEECCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999986666889999999999999 59999999999999999999
Q ss_pred HhcCCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHH
Q 003508 401 ALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 437 (814)
Q Consensus 401 ~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 437 (814)
+|+|+.+||++|+++++++|.+||+.+|+++||.+|.
T Consensus 419 aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 419 ALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred HHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999998875
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-86 Score=756.37 Aligned_cols=424 Identities=54% Similarity=0.921 Sum_probs=389.4
Q ss_pred ccCCC-cCCCcEEEEeCCCCCCCchhhHHHHHhhcCccEEEeecChHHHHhHhhhhhhhccccccCCCCCCcccccccch
Q 003508 4 LFEGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTR 82 (814)
Q Consensus 4 ~~~~~-~~~~~~wvgw~g~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~~~~~ 82 (814)
+|.++ ++.+++||||+|...+++++.......+.+|+|+|||+++++++.||+||||++|||+|||++...
T Consensus 33 ~l~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~y~~f~~~~LWp~~H~~~~~~-------- 104 (460)
T cd03788 33 ALKGLLKRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLA-------- 104 (460)
T ss_pred HHHHHHhcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCHHHHHHHHHHhhhhhcchhhcCCCCcc--------
Confidence 34455 667999999999877655444355667789999999999999999999999999999999985332
Q ss_pred hhHHH-HHHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHH
Q 003508 83 SFQSQ-FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 161 (814)
Q Consensus 83 ~~~~~-w~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ 161 (814)
.|++. |++|+++|+.||++|.+.++++|+||||||||+++|.++|++.++++|+||+|||||++++|+++|++++|+++
T Consensus 105 ~~~~~~w~~Y~~vN~~fa~~i~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~ 184 (460)
T cd03788 105 RFDREDWEAYVRVNRKFADAIAEVLRPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFRCLPWREELLRG 184 (460)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCChHHHhhCCChHHHHHH
Confidence 35554 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccEEeEecHHHHHHHHHHHHHHhCcccCC-CceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCC
Q 003508 162 VLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 240 (814)
Q Consensus 162 ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~-~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~ 240 (814)
|++||+||||+++|+++|+++|.++++.+... ..++++|+.++|.++|+|||++.|.+....++..+...+++..+.++
T Consensus 185 ~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~ 264 (460)
T cd03788 185 LLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGR 264 (460)
T ss_pred HhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCC
Confidence 99999999999999999999999999987554 67889999999999999999999998766555555555666667789
Q ss_pred eEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEE
Q 003508 241 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 320 (814)
Q Consensus 241 ~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~ 320 (814)
++|++|||+++.||+..+|+||++|++++|+++++++|+|+|.|++++++++.++++++++++++||.+||..+|.+|++
T Consensus 265 ~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~ 344 (460)
T cd03788 265 KLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRY 344 (460)
T ss_pred EEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEE
Confidence 99999999999999999999999999999999999999999999988999999999999999999999999888999999
Q ss_pred ecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHH
Q 003508 321 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIAR 400 (814)
Q Consensus 321 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~~~lvnP~d~~~lA~ai~~ 400 (814)
+.|.++.+++.++|+.|||||+||.+||||||++|||||+..++|++|+|+++|+++.+ .+|++|||+|++++|++|.+
T Consensus 345 ~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~~-~~g~lv~p~d~~~la~ai~~ 423 (460)
T cd03788 345 LYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEEL-SGALLVNPYDIDEVADAIHR 423 (460)
T ss_pred EeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhhc-CCCEEECCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999997677889999999999884 89999999999999999999
Q ss_pred HhcCCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHH
Q 003508 401 ALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 436 (814)
Q Consensus 401 ~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 436 (814)
+|+|++++++.+++++++++++||+..|+++|+.+|
T Consensus 424 ~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 424 ALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred HHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999876
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=362.39 Aligned_cols=244 Identities=20% Similarity=0.335 Sum_probs=197.3
Q ss_pred HHhccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCceEE
Q 003508 463 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLA 542 (814)
Q Consensus 463 y~~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l~li 542 (814)
..++++.+|||||||||+|++++| +.+.++++++++|++|++ +..|+|||||++..++++++..+++++
T Consensus 93 ~~~~~~~ll~lDyDGTL~PIv~~P---------~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~~~~l~la 161 (354)
T PLN02151 93 KSEGKQIVMFLDYDGTLSPIVDDP---------DRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVKLTELYYA 161 (354)
T ss_pred hhcCCceEEEEecCccCCCCCCCc---------ccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcCCccceEE
Confidence 356678999999999999999999 678999999999999996 468999999999999999997789999
Q ss_pred ccCcEEEEeC--CCceee----cccccCChHHHHHHHHHHHHH---hccCCCceeeeccceEEEEeccCChhhhHHHHHH
Q 003508 543 AENGMFLRCT--TGKWMT----TMPEHLNMEWVDSLKHVFEYF---TERTPRSHFEQRETSLVWNYKYADVEFGRIQARD 613 (814)
Q Consensus 543 a~hG~~i~~~--~~~~~~----~~~~~~~~~~~~~v~~i~~~~---~~~~~g~~iE~K~~~v~~hyr~~d~e~~~~~a~~ 613 (814)
|+||++++.+ +..|+. .. ......|.+.+.++++.+ +.++||+++|+|+++++||||+++++.. .+
T Consensus 162 GsHG~e~~~p~~g~~~~~~~~~~~-~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~----~~ 236 (354)
T PLN02151 162 GSHGMDIKGPEQGSKYKKENQSLL-CQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKW----SD 236 (354)
T ss_pred EeCCceeecCCCCccccccccccc-cccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHH----HH
Confidence 9999999843 224531 11 112446777666665554 5789999999999999999999976522 33
Q ss_pred HHHHHhcCCCCCCc-eEEEEcCcEEEEEEC-CCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccCCC
Q 003508 614 MLQHLWTGPISNAS-VEVVQGSKSVEVRAV-GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPEL 691 (814)
Q Consensus 614 l~~~l~~~~~~~~~-~~v~~g~~~vEI~p~-gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~~~ 691 (814)
+...+ ..++.+.+ +.+..|++++||+|. ++|||.||+.|++.+++.+ ...++++|||| |.|||+||++++..
T Consensus 237 l~~~l-~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~---~~~~~pvyiGD-D~TDEDaF~~L~~~- 310 (354)
T PLN02151 237 LANQV-RSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYAN---CTDVFPIYIGD-DRTDEDAFKILRDK- 310 (354)
T ss_pred HHHHH-HHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhccccc---CCCCeEEEEcC-CCcHHHHHHHHhhc-
Confidence 33444 33344434 899999999999995 9999999999999988754 23468999999 99999999999641
Q ss_pred CCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCce
Q 003508 692 PDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENY 771 (814)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 (814)
..+
T Consensus 311 -----------------------------------------------------------------------------~~G 313 (354)
T PLN02151 311 -----------------------------------------------------------------------------KQG 313 (354)
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 125
Q ss_pred EEEEeC--CCCcccccccCChHHHHHHHHHhhhccC
Q 003508 772 FSCAVG--RPRTNARFLLQSSDEVVSFLKKLADASS 805 (814)
Q Consensus 772 ~~~~VG--~~~s~A~~~l~~~~~v~~~L~~l~~~~~ 805 (814)
++|+|| +++|.|+|+|+||+||.+||+.|+....
T Consensus 314 ~gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~ 349 (354)
T PLN02151 314 LGILVSKYAKETNASYSLQEPDEVMEFLERLVEWKQ 349 (354)
T ss_pred ccEEeccCCCCCcceEeCCCHHHHHHHHHHHHHhhh
Confidence 777777 6899999999999999999999987543
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=347.68 Aligned_cols=251 Identities=29% Similarity=0.442 Sum_probs=217.3
Q ss_pred ChhHHHHHHHhccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhh
Q 003508 455 READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 534 (814)
Q Consensus 455 ~~~~~~~~y~~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~ 534 (814)
....+.+.|.++++++||+||||||+++..+| ..+.++++++++|++|++++++.|+|+|||+..+++.|+
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p---------~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~ 75 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHP---------EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLF 75 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCc---------cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhc
Confidence 45667788999999999999999999999999 688999999999999999999999999999999999999
Q ss_pred cccCceEEccCcEEEEeCCC-ceeecccccCChHHHHHHHHHHHHHhccCCCceeeeccceEEEEeccCChhhhHHHHHH
Q 003508 535 QEYNLWLAAENGMFLRCTTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARD 613 (814)
Q Consensus 535 ~~~~l~lia~hG~~i~~~~~-~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~~v~~hyr~~d~e~~~~~a~~ 613 (814)
+..+++++|+||++++..++ .|.... +..+..|++.+.++++++++++||+++|.|+++++||||+++++....++..
T Consensus 76 ~v~~i~l~aehGa~~r~~~g~~~~~~~-~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~ 154 (266)
T COG1877 76 GVPGIGLIAEHGAEVRDPNGKWWINLA-EEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALA 154 (266)
T ss_pred CCCCccEEEecceEEecCCCCeeEecC-HHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHH
Confidence 97799999999999975444 455544 4456788999999999999999999999999999999999987766544444
Q ss_pred HHHHHhcCCCCCCceEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccCCCCC
Q 003508 614 MLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPD 693 (814)
Q Consensus 614 l~~~l~~~~~~~~~~~v~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~~~~~ 693 (814)
..... .. ...+++..||++||++|.++|||.++++++++.++. .++++|.|| |.|||+||++++..
T Consensus 155 ~~~~~-~~---~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~------~~~~~~aGD-D~TDE~~F~~v~~~--- 220 (266)
T COG1877 155 EAATL-IN---ELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFD------GRFPIFAGD-DLTDEDAFAAVNKL--- 220 (266)
T ss_pred HHHhc-cc---cccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCC------CCcceecCC-CCccHHHHHhhccC---
Confidence 33332 11 112899999999999999999999999999998743 368899999 99999999999752
Q ss_pred CCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCceEE
Q 003508 694 DGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFS 773 (814)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 773 (814)
..++
T Consensus 221 ----------------------------------------------------------------------------~~~~ 224 (266)
T COG1877 221 ----------------------------------------------------------------------------DSIT 224 (266)
T ss_pred ----------------------------------------------------------------------------CCce
Confidence 3699
Q ss_pred EEeCCCCcccccccCChHHHHHHHHHhhhccC
Q 003508 774 CAVGRPRTNARFLLQSSDEVVSFLKKLADASS 805 (814)
Q Consensus 774 ~~VG~~~s~A~~~l~~~~~v~~~L~~l~~~~~ 805 (814)
|+||.+.|.|+|++.++..+..+|.++....+
T Consensus 225 v~v~~~~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 225 VKVGVGSTQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred EEecCCcccccccccccHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999977654
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=360.08 Aligned_cols=248 Identities=19% Similarity=0.309 Sum_probs=198.0
Q ss_pred HHHHHhccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCc
Q 003508 460 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 539 (814)
Q Consensus 460 ~~~y~~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l 539 (814)
+.++.+.++.+||+||||||+|++++| +.+.++++++++|++|++ +..|+|+|||++..+.++++..++
T Consensus 103 ~~~~~~~k~~llflD~DGTL~Piv~~p---------~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~l~~l 171 (366)
T PLN03017 103 IMEASRGKQIVMFLDYDGTLSPIVDDP---------DKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNFVKLAEL 171 (366)
T ss_pred HHHHhcCCCeEEEEecCCcCcCCcCCc---------ccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHhhcccCc
Confidence 444556688999999999999999888 566899999999999995 689999999999999999776678
Q ss_pred eEEccCcEEEEeCCCceeec------ccccCChHHHHHHHHH---HHHHhccCCCceeeeccceEEEEeccCChhhhHHH
Q 003508 540 WLAAENGMFLRCTTGKWMTT------MPEHLNMEWVDSLKHV---FEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQ 610 (814)
Q Consensus 540 ~lia~hG~~i~~~~~~~~~~------~~~~~~~~~~~~v~~i---~~~~~~~~~g~~iE~K~~~v~~hyr~~d~e~~~~~ 610 (814)
+++|+||++++.+++.|... ........|++.+.++ ++.+++++||++||+|+++++||||+++++..
T Consensus 172 ~l~g~hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~--- 248 (366)
T PLN03017 172 YYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKW--- 248 (366)
T ss_pred eEEEcCCcEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHH---
Confidence 99999999998543333210 0001223465555555 66678899999999999999999999976532
Q ss_pred HHHHHHHHhcCCCCCC-ceEEEEcCcEEEEEE-CCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhcc
Q 003508 611 ARDMLQHLWTGPISNA-SVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 611 a~~l~~~l~~~~~~~~-~~~v~~g~~~vEI~p-~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~ 688 (814)
.++...+ ..++.+. .+.+..|++++||+| .++|||.|++.||+.+++.+ ...++++|||| |.|||+||++++
T Consensus 249 -~~l~~~~-~~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~---~~~~~pvyiGD-D~TDEDaF~~L~ 322 (366)
T PLN03017 249 -SELVLQV-RSVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGN---TNNVFPVYIGD-DRTDEDAFKMLR 322 (366)
T ss_pred -HHHHHHH-HHHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhccccc---CCCceEEEeCC-CCccHHHHHHHh
Confidence 3333334 3333343 489999999999999 59999999999999998754 23578999999 999999999996
Q ss_pred CCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCC
Q 003508 689 PELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNK 768 (814)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (814)
..
T Consensus 323 ~~------------------------------------------------------------------------------ 324 (366)
T PLN03017 323 DR------------------------------------------------------------------------------ 324 (366)
T ss_pred hc------------------------------------------------------------------------------
Confidence 41
Q ss_pred CceEEEEeC--CCCcccccccCChHHHHHHHHHhhhccC
Q 003508 769 ENYFSCAVG--RPRTNARFLLQSSDEVVSFLKKLADASS 805 (814)
Q Consensus 769 ~~~~~~~VG--~~~s~A~~~l~~~~~v~~~L~~l~~~~~ 805 (814)
..+|+|+|| +++|.|+|+|+||+||.+||+.|++...
T Consensus 325 ~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~ 363 (366)
T PLN03017 325 GEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQ 363 (366)
T ss_pred CCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHHh
Confidence 137999999 5899999999999999999999987643
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=360.21 Aligned_cols=247 Identities=20% Similarity=0.297 Sum_probs=198.4
Q ss_pred HHHHHhccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCc
Q 003508 460 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 539 (814)
Q Consensus 460 ~~~y~~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l 539 (814)
+.+|.++++++|||||||||+|++++| +.+.++++++++|++|+++ ..|+|||||++..|+++++..++
T Consensus 111 ~~~~~~~k~~~LfLDyDGTLaPIv~~P---------d~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~~~l 179 (384)
T PLN02580 111 IANFAKGKKIALFLDYDGTLSPIVDDP---------DRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGLTEL 179 (384)
T ss_pred HHHHhhcCCeEEEEecCCccCCCCCCc---------ccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCCCCc
Confidence 347889999999999999999999999 7899999999999999985 57999999999999999998899
Q ss_pred eEEccCcEEEEeCCC-----ceeeccc-----------ccCChHHHHHHHHHH---HHHhccCCCceeeeccceEEEEec
Q 003508 540 WLAAENGMFLRCTTG-----KWMTTMP-----------EHLNMEWVDSLKHVF---EYFTERTPRSHFEQRETSLVWNYK 600 (814)
Q Consensus 540 ~lia~hG~~i~~~~~-----~~~~~~~-----------~~~~~~~~~~v~~i~---~~~~~~~~g~~iE~K~~~v~~hyr 600 (814)
+++|+||++++...+ .|..... ......|.+.+.+++ ..+++++||+++|+|+++++||||
T Consensus 180 ~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR 259 (384)
T PLN02580 180 YYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYR 259 (384)
T ss_pred cEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeC
Confidence 999999999974211 1211100 011345665555554 446777899999999999999999
Q ss_pred cCChhhhHHHHHHHHHHHhcCCCCCCceEEEEcCcEEEEEE-CCCCHHHHHHHHHHHhcccccCCCCCc--eEEEEeCCC
Q 003508 601 YADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVHSKKMKTAID--YVLCIGHFL 677 (814)
Q Consensus 601 ~~d~e~~~~~a~~l~~~l~~~~~~~~~~~v~~g~~~vEI~p-~gvnKG~av~~ll~~~~~~~~~~~~~d--~vl~iGD~d 677 (814)
++++++...++.++...+ .. ...+.+..|++++||+| .++|||.||++|++++++.. .+ .++|||| |
T Consensus 260 ~a~~~~~~~~~~~l~~~l-~~---~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~-----~d~~~pi~iGD-D 329 (384)
T PLN02580 260 NVDEKNWPLVAQCVHDVL-KK---YPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSN-----CDDVLPIYIGD-D 329 (384)
T ss_pred CCCchHHHHHHHHHHHHH-Hh---CCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCCCc-----ccceeEEEECC-C
Confidence 998776665666665555 32 12488999999999999 59999999999999988532 22 3599999 9
Q ss_pred CCcHHHHHhccCCCCCCCCCCCCCCCCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 003508 678 GKDEDVYAFFEPELPDDGPGIPRTRPTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSD 757 (814)
Q Consensus 678 ~nDe~mf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (814)
.|||+||++++..
T Consensus 330 ~TDedmF~~L~~~------------------------------------------------------------------- 342 (384)
T PLN02580 330 RTDEDAFKVLREG------------------------------------------------------------------- 342 (384)
T ss_pred chHHHHHHhhhcc-------------------------------------------------------------------
Confidence 9999999999641
Q ss_pred ccccccccCCCCceEEEEeC--CCCcccccccCChHHHHHHHHHhhhccC
Q 003508 758 KTSYNVLDLNKENYFSCAVG--RPRTNARFLLQSSDEVVSFLKKLADASS 805 (814)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~VG--~~~s~A~~~l~~~~~v~~~L~~l~~~~~ 805 (814)
..+++|.|| .++|.|+|+|+||+||.+||+.|+....
T Consensus 343 -----------~~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~~ 381 (384)
T PLN02580 343 -----------NRGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWKK 381 (384)
T ss_pred -----------CCceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhhh
Confidence 025677666 5899999999999999999999987654
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-41 Score=351.42 Aligned_cols=203 Identities=36% Similarity=0.603 Sum_probs=147.6
Q ss_pred EEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCceEEccCcEEEEe
Q 003508 472 ILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRC 551 (814)
Q Consensus 472 ~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l~lia~hG~~i~~ 551 (814)
||||||||++++++| +.+.++++++++|++|++++++.|+|+|||++.+++.+++..+++++|+||++++.
T Consensus 1 ~lDyDGTL~p~~~~p---------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP---------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-G---------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCc---------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEecc
Confidence 799999999999999 78899999999999999999999999999999997777777799999999999997
Q ss_pred CCC-ceeecccccCChHHHHHHHHHHHHHhccCCCceeeeccceEEEEeccCChhhhHHHHHHHHHHHhcCCCCC-CceE
Q 003508 552 TTG-KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN-ASVE 629 (814)
Q Consensus 552 ~~~-~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~~-~~~~ 629 (814)
+++ .|.... ......|++.+.++++.+++++||+++|+|+++++||||+++++++..++.++...+ .+.... .+++
T Consensus 72 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~ 149 (235)
T PF02358_consen 72 PGGSEWTNLP-ADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQL-REILASHPGLE 149 (235)
T ss_dssp TTE-EEE-TT-GGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHH-HHHHHHH-T-E
T ss_pred Cccccccccc-cccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHH-HHHHHhCCCEE
Confidence 665 455432 345678999999999999999999999999999999999999998888888888888 554443 3799
Q ss_pred EEEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 630 VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 630 v~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
+..|+++|||+|.+++||.|++.|++.++..+ .+.++++|+|| |.|||+||++++.
T Consensus 150 v~~g~~~vEvrp~~~~KG~av~~ll~~~~~~~---~~~~~~l~~GD-D~tDE~~f~~~~~ 205 (235)
T PF02358_consen 150 VVPGKKVVEVRPPGVNKGSAVRRLLEELPFAG---PKPDFVLYIGD-DRTDEDAFRALRE 205 (235)
T ss_dssp EEE-SSEEEEE-TT--HHHHHHHHHTTS------------EEEEES-SHHHHHHHHTTTT
T ss_pred EEECCCEEEEEeCCCChHHHHHHHHHhcCccc---cccceeEEecC-CCCCHHHHHHHHh
Confidence 99999999999999999999999999987432 24789999999 9999999999976
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-37 Score=365.28 Aligned_cols=547 Identities=14% Similarity=0.138 Sum_probs=344.7
Q ss_pred HHHHHHHHHHHHHHHHHh-------C-----CCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhcc----
Q 003508 88 FAAYIKANQMFADVVNKH-------Y-----KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT---- 151 (814)
Q Consensus 88 w~~Y~~vN~~fa~~i~~~-------~-----~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~---- 151 (814)
|..-..++..+...+.+. + ..+|+||.|+++--.++..+++.. ++|.+++.|..= .+-++.
T Consensus 278 ~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSLg--r~K~~~ll~~ 354 (1050)
T TIGR02468 278 WPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSAALLSGAL-NVPMVLTGHSLG--RDKLEQLLKQ 354 (1050)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHHHHHHHHHhh-CCCEEEECccch--hhhhhhhccc
Confidence 777666666666655431 1 126999999988888888888765 689999999631 111110
Q ss_pred -------------CCCcHHHH-HHHhhccEEeEecHHHHHHHHHHHH-------HHhCcccCCCceeeCCe-EEEEEEee
Q 003508 152 -------------LPSRSDLL-RAVLAADLVGFHTYDYARHFVSACT-------RILGFEGTPEGVEDQGR-LTRVAAFP 209 (814)
Q Consensus 152 -------------lp~~~~il-~~ll~~DlIgf~~~~~~~~fl~~~~-------~~l~~~~~~~~~~~~g~-~~~i~v~p 209 (814)
++.+-+.- ..+..||.|.-.|..........-. +.|-. ....++.++|+ ..++.|||
T Consensus 355 g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~-~~~~gv~~~g~~~~ri~VIP 433 (1050)
T TIGR02468 355 GRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRA-RARRGVSCYGRFMPRMAVIP 433 (1050)
T ss_pred ccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhh-hhcccccccccCCCCeEEeC
Confidence 11111111 2366799999999877665432100 00000 00123333332 23899999
Q ss_pred cccChhhhhhhhcCCchH-------------HHHHHHHHHh--CCCeEEEEeccccccCCHHHHHHHHHHHHHhCccccC
Q 003508 210 IGIDSERFIRALEINPVQ-------------VHIKELQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRG 274 (814)
Q Consensus 210 ~GId~~~f~~~~~~~~~~-------------~~~~~lr~~~--~~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~ 274 (814)
+|||++.|.+.....+.. .....+++.+ +++++||+|||+++.||+..+|+||..+.+..+. .
T Consensus 434 pGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~--~ 511 (1050)
T TIGR02468 434 PGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLREL--A 511 (1050)
T ss_pred CCCcHHHccCCCccccchhcccccccccccchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccC--C
Confidence 999999998743211100 0112333333 4678999999999999999999999998654322 1
Q ss_pred ceEEEEEecCCCCChHHH----HHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhc----cEEEECCCC
Q 003508 275 KVVLLQIAVPTRTDVPEY----QRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLR 346 (814)
Q Consensus 275 ~v~Lv~vg~p~r~~~~~~----~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~A----Dv~v~~S~~ 346 (814)
++.+| +|... +.++. .....++..++++++.. + .|. |.|+++.++++.+|+.| ||||+||++
T Consensus 512 nL~LI-iG~gd--d~d~l~~~~~~~l~~L~~li~~lgL~----g--~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~ 581 (1050)
T TIGR02468 512 NLTLI-MGNRD--DIDEMSSGSSSVLTSVLKLIDKYDLY----G--QVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFI 581 (1050)
T ss_pred CEEEE-EecCc--hhhhhhccchHHHHHHHHHHHHhCCC----C--eEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCccc
Confidence 24443 45321 11111 12345566777665421 2 355 57899999999999988 699999999
Q ss_pred ccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHcC
Q 003508 347 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 424 (814)
Q Consensus 347 EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~ 424 (814)
||||++++|||||+ .|||+|+.+|..+.+ |.+|++|+|.|++++|++|.++|+++ +.++++..++++.+++|+
T Consensus 582 EgFGLvlLEAMAcG----lPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dp-elr~~m~~~gr~~v~~FS 656 (1050)
T TIGR02468 582 EPFGLTLIEAAAHG----LPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADK-QLWAECRQNGLKNIHLFS 656 (1050)
T ss_pred CCCCHHHHHHHHhC----CCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHCC
Confidence 99999999999995 899999999998887 67999999999999999999999854 567777888888999999
Q ss_pred HHHHHHHHHHHHHHhHHHh-hhcccc------C---CC-------------------------------CCCh----hHH
Q 003508 425 AQEWAETFVSELNDTVVEA-QLRIKQ------V---PP-------------------------------SLRE----ADS 459 (814)
Q Consensus 425 ~~~W~~~fl~~l~~~~~~~-~~~~~~------~---~~-------------------------------~l~~----~~~ 459 (814)
|..-+++++..+......+ +.+... . .+ .++. ..+
T Consensus 657 We~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (1050)
T TIGR02468 657 WPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGSSNVEGSGPPADRVAKI 736 (1050)
T ss_pred HHHHHHHHHHHHHHHhccCcccccccccccccccccCccccccccccchhhccccccccccccccccccccchhhHHHHH
Confidence 9999999998877653221 110000 0 00 0000 011
Q ss_pred HHHH---H----------------------hccCeEEE--EecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhh
Q 003508 460 IERY---L----------------------RSNNRLLI--LGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALC 512 (814)
Q Consensus 460 ~~~y---~----------------------~s~~~li~--lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~ 512 (814)
.++. . ...+++|+ +|+|+| +.. .+.+.+.++.+.
T Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~~------------------~~~l~~~~~~~~ 797 (1050)
T TIGR02468 737 ENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KDL------------------LQIIKNIFEAVR 797 (1050)
T ss_pred HHHHhhccccccccccccccccccccCccccccceEEEEEeccCCC-CCh------------------HHHHHHHHHHHh
Confidence 1111 1 11245666 899999 221 122333344443
Q ss_pred ---cCCCceEEEEcCCChHHHHHhhcccC------ceEEccCcEEEEeCC------Cceeecc--cccCChHH-HHHHHH
Q 003508 513 ---HDPKTTIVVLSGSDRNVLDKNFQEYN------LWLAAENGMFLRCTT------GKWMTTM--PEHLNMEW-VDSLKH 574 (814)
Q Consensus 513 ---~~~~~~V~IvSGR~~~~l~~~~~~~~------l~lia~hG~~i~~~~------~~~~~~~--~~~~~~~~-~~~v~~ 574 (814)
......++++|||++..+.+.+...+ ..+||+=|.+|+.+. ..|.... .......| .+.+.+
T Consensus 798 ~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~ 877 (1050)
T TIGR02468 798 KERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRK 877 (1050)
T ss_pred ccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHH
Confidence 22347899999999999999886543 458999999998641 2222100 01234456 345665
Q ss_pred HHHHHhccC--------CCceeeecc----ceEEEEeccCChhhhHHHHHHHHHHHhcCCCCCCceEEE--EcCcEEEEE
Q 003508 575 VFEYFTERT--------PRSHFEQRE----TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV--QGSKSVEVR 640 (814)
Q Consensus 575 i~~~~~~~~--------~g~~iE~K~----~~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~~~~~~v~--~g~~~vEI~ 640 (814)
.+..+.... ++...+... +++++... +++.. ...+++.+.| ... ...++++ .+...++|.
T Consensus 878 ~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~--d~~~~-~~v~elr~~L-r~~--gLr~~~iys~~~~~LDVl 951 (1050)
T TIGR02468 878 TLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVK--DPSKV-PPVKELRKLL-RIQ--GLRCHAVYCRNGTRLNVI 951 (1050)
T ss_pred HHHHHhhhcccccccccccceecChhhCCCceEEEEec--CcccC-ccHHHHHHHH-HhC--CCceEEEeecCCcEeeee
Confidence 665554321 344444433 33433322 22211 1235565556 221 2234443 335899999
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceE-EEEeCCCCC-c-HHHHHhc
Q 003508 641 AVGVTKGAAIDRILAEIVHSKKMKTAIDYV-LCIGHFLGK-D-EDVYAFF 687 (814)
Q Consensus 641 p~gvnKG~av~~ll~~~~~~~~~~~~~d~v-l~iGD~d~n-D-e~mf~~~ 687 (814)
|..+|||.||++|+.+++ ++.+.+ +++|| ..| | |+|+.-+
T Consensus 952 P~~ASKgqAlRyL~~rwg------i~l~~v~VfaGd-SGntD~e~Ll~G~ 994 (1050)
T TIGR02468 952 PLLASRSQALRYLFVRWG------IELANMAVFVGE-SGDTDYEGLLGGL 994 (1050)
T ss_pred eCCCCHHHHHHHHHHHcC------CChHHeEEEecc-CCCCCHHHHhCCc
Confidence 999999999999999998 567777 66999 888 9 6665443
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=325.04 Aligned_cols=238 Identities=24% Similarity=0.365 Sum_probs=201.4
Q ss_pred ccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCceEEccC
Q 003508 466 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAEN 545 (814)
Q Consensus 466 s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l~lia~h 545 (814)
|++++|||||||||++..++| ..+.++++++++|++|++++++.|+|+|||++.++...+...+++++|+|
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p---------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~h 71 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDP---------DAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEH 71 (244)
T ss_pred CCcEEEEEecCccccCCcCCC---------cccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeec
Confidence 578999999999999998888 57889999999999999999999999999999999887766689999999
Q ss_pred cEEEEeCCC--ceeecccccCChHHHHHHHHHHHHHhccCCCceeeeccceEEEEeccC-ChhhhHHHHHHHHHHHhcCC
Q 003508 546 GMFLRCTTG--KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYA-DVEFGRIQARDMLQHLWTGP 622 (814)
Q Consensus 546 G~~i~~~~~--~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~~v~~hyr~~-d~e~~~~~a~~l~~~l~~~~ 622 (814)
|++++.++. .|.... .....|++.+.++++.+.++ ||+++|+|+++++||||++ +++.+..++.++..++ .
T Consensus 72 G~~~~~~g~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~-~-- 145 (244)
T TIGR00685 72 GCEMKDNGSCQDWVNLT--EKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKI-L-- 145 (244)
T ss_pred CEEEecCCCcceeeech--hhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHH-h--
Confidence 999986332 243321 12246888888888888876 9999999999999999998 7788877777777666 2
Q ss_pred CCCCceEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccCCCCCCCCCCCCCC
Q 003508 623 ISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTR 702 (814)
Q Consensus 623 ~~~~~~~v~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~~~~~~~~~~~~~~ 702 (814)
...++.+..|+.++|++|.++|||.++++++++++ ...+.++|||| |.||++||+.++...
T Consensus 146 -~~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~------~~~~~~i~iGD-~~~D~~~~~~~~~~~----------- 206 (244)
T TIGR00685 146 -SFTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQP------GSGISPVYLGD-DITDEDAFRVVNNQW----------- 206 (244)
T ss_pred -cCCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcc------cCCCceEEEcC-CCcHHHHHHHHhccc-----------
Confidence 23478899999999999999999999999999987 34678999999 999999999994410
Q ss_pred CCCCcCCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCceEEEEe--CCCC
Q 003508 703 PTDAIKVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAV--GRPR 780 (814)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V--G~~~ 780 (814)
...++++|.| |.+.
T Consensus 207 ----------------------------------------------------------------~~~g~~~v~v~~g~~~ 222 (244)
T TIGR00685 207 ----------------------------------------------------------------GNYGFYPVPIGSGSKK 222 (244)
T ss_pred ----------------------------------------------------------------CCCCeEEEEEecCCcC
Confidence 0025799999 8889
Q ss_pred cccccccCChHHHHHHHHHhh
Q 003508 781 TNARFLLQSSDEVVSFLKKLA 801 (814)
Q Consensus 781 s~A~~~l~~~~~v~~~L~~l~ 801 (814)
|.|+|+++++++|.++|+.|+
T Consensus 223 ~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 223 TVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred CCceEeCCCHHHHHHHHHHHh
Confidence 999999999999999999886
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=323.56 Aligned_cols=236 Identities=22% Similarity=0.244 Sum_probs=196.1
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCceEEccCcE
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGM 547 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l~lia~hG~ 547 (814)
+++||+||||||++.+++| +...++++++++|++|++++++.|+|+|||+...+.++++.+++.++|+||+
T Consensus 14 ~~li~~D~DGTLl~~~~~p---------~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa 84 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHP---------DQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGA 84 (266)
T ss_pred CEEEEEecCCCCCCCCCCc---------ccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCC
Confidence 6899999999999998888 5778999999999999987899999999999999999999888889999999
Q ss_pred EEEeCCCceeecccccCChHHHHHHHHHHHHHhccCCCceeeeccceEEEEeccCChhhhHHHHHHHHHHHhcCCCCCCc
Q 003508 548 FLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNAS 627 (814)
Q Consensus 548 ~i~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~~~~ 627 (814)
+++..++.|... .....+...+.+.++.+..++||+++|.|+.+++||||+++.+ .....++.+.+ .+... .
T Consensus 85 ~i~~~~~~~~~~---~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~i-~~~~~--~ 156 (266)
T PRK10187 85 ERRDINGKTHIV---HLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQRI-TQIWP--Q 156 (266)
T ss_pred eeecCCCCeeec---cCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHHH-HhhCC--c
Confidence 998544444321 2344566677777777788899999999999999999977321 11233444444 22221 3
Q ss_pred eEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccCCCCCCCCCCCCCCCCCCc
Q 003508 628 VEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAI 707 (814)
Q Consensus 628 ~~v~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~~~~~~~~~~~~~~~~~~~ 707 (814)
+.+..|+.++||+|+++|||.||++++++++ +..+.++|||| |.|||+||++++.+
T Consensus 157 ~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~------~~~~~v~~~GD-~~nD~~mf~~~~~~----------------- 212 (266)
T PRK10187 157 LALQPGKCVVEIKPRGTNKGEAIAAFMQEAP------FAGRTPVFVGD-DLTDEAGFAVVNRL----------------- 212 (266)
T ss_pred eEEeCCCEEEEeeCCCCCHHHHHHHHHHhcC------CCCCeEEEEcC-CccHHHHHHHHHhc-----------------
Confidence 6677899999999999999999999999987 45688999999 99999999999642
Q ss_pred CCcchhhhhhhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccCCCCceEEEEeCCCCccccccc
Q 003508 708 KVPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLL 787 (814)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VG~~~s~A~~~l 787 (814)
++++|+||.++|.|+|+|
T Consensus 213 --------------------------------------------------------------~g~~vavg~a~~~A~~~l 230 (266)
T PRK10187 213 --------------------------------------------------------------GGISVKVGTGATQASWRL 230 (266)
T ss_pred --------------------------------------------------------------CCeEEEECCCCCcCeEeC
Confidence 479999999999999999
Q ss_pred CChHHHHHHHHHhhhccCC
Q 003508 788 QSSDEVVSFLKKLADASSS 806 (814)
Q Consensus 788 ~~~~~v~~~L~~l~~~~~~ 806 (814)
+||++|.+||+.|+...+.
T Consensus 231 ~~~~~v~~~L~~l~~~~~~ 249 (266)
T PRK10187 231 AGVPDVWSWLEMITTAQQQ 249 (266)
T ss_pred CCHHHHHHHHHHHHHhhhc
Confidence 9999999999999977664
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-25 Score=265.25 Aligned_cols=320 Identities=15% Similarity=0.179 Sum_probs=219.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhh-----CCCCeEEEEEecC-----CCchhhh-ccCCC---
Q 003508 89 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTP-----FPSSEIH-RTLPS--- 154 (814)
Q Consensus 89 ~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~-----~~~~~i~~f~H~P-----fp~~e~~-~~lp~--- 154 (814)
..|.-+.++.++.+...-..+||||+||||.-++|.++.+. +.++++.|++|.- ||...+- ..+|+
T Consensus 591 ~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l 670 (977)
T PLN02939 591 KRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQL 670 (977)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHc
Confidence 33444455554444433235799999999999985544431 3567899999975 3321111 11221
Q ss_pred ------------cHHHH-HHHhhccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhh
Q 003508 155 ------------RSDLL-RAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 221 (814)
Q Consensus 155 ------------~~~il-~~ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~ 221 (814)
.-.++ .++..||.|...++.|++.... ..-.|++. . +..+..++.+||||||++.|.|..
T Consensus 671 ~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---~--L~~~~~Kl~gIlNGID~e~wnPat 743 (977)
T PLN02939 671 DRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---T--LKFHSKKFVGILNGIDTDTWNPST 743 (977)
T ss_pred cChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---H--hccccCCceEEecceehhhcCCcc
Confidence 11122 4577799999999999887654 11111110 0 123456888999999999988753
Q ss_pred cCC----------ch-HHHHHHHHHHhC------CCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecC
Q 003508 222 EIN----------PV-QVHIKELQETFA------GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVP 284 (814)
Q Consensus 222 ~~~----------~~-~~~~~~lr~~~~------~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p 284 (814)
... +. ......+|++++ +.++|++|||+.+.||++.+++|+.++++ ++ +.||++|.+
T Consensus 744 D~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vqLVIvGdG 817 (977)
T PLN02939 744 DRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQFVLLGSS 817 (977)
T ss_pred ccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CEEEEEeCC
Confidence 210 00 112345777773 35799999999999999999999998874 22 557777742
Q ss_pred CCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCC
Q 003508 285 TRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKK 364 (814)
Q Consensus 285 ~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~ 364 (814)
++ ..++++++.++.+++.. ..|.| .|.++......+|+.||+||+||.+|||||+++|||+||
T Consensus 818 -----p~-~~~e~eL~~La~~l~l~------drV~F-lG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyG---- 880 (977)
T PLN02939 818 -----PV-PHIQREFEGIADQFQSN------NNIRL-ILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYG---- 880 (977)
T ss_pred -----Cc-HHHHHHHHHHHHHcCCC------CeEEE-EeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCC----
Confidence 21 13456677777765321 13654 577787778899999999999999999999999999994
Q ss_pred ceEEEeCCCCccccc-----------CCceEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHhHHHHHcCHHHHHH
Q 003508 365 GVLILSEFAGAAQSL-----------GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHVTTHTAQEWAE 430 (814)
Q Consensus 365 g~vVlS~~~G~~e~l-----------g~~~~lvnP~d~~~lA~ai~~~L~---~~~~er~~r~~~~~~~v~~~~~~~W~~ 430 (814)
.|||++..+|+.+.+ |.+|++|+|.|+++++++|.+++. ..++.++++.++. +...|+|...++
T Consensus 881 tPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~~A~ 958 (977)
T PLN02939 881 SVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKD--MNIDFSWDSSAS 958 (977)
T ss_pred CCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHH--HHhcCCHHHHHH
Confidence 799999999998766 247999999999999999999886 2445555555443 346789999999
Q ss_pred HHHHHHHHhH
Q 003508 431 TFVSELNDTV 440 (814)
Q Consensus 431 ~fl~~l~~~~ 440 (814)
+++.....+.
T Consensus 959 qYeeLY~~ll 968 (977)
T PLN02939 959 QYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHH
Confidence 9887666553
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-25 Score=259.02 Aligned_cols=296 Identities=23% Similarity=0.283 Sum_probs=204.7
Q ss_pred CCCEEEEeCccchhHHHHHHhhC----CCCeEEEEEecCCCc----hhhhcc--CCC-------------cHHHHHHHhh
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYN----SDMKVGWFLHTPFPS----SEIHRT--LPS-------------RSDLLRAVLA 164 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~----~~~~i~~f~H~Pfp~----~e~~~~--lp~-------------~~~il~~ll~ 164 (814)
..||||+||+|.-++|.+++++. .+.|+.++.|..-.. .+.+.. +|. ...+..++..
T Consensus 118 ~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (466)
T PRK00654 118 RPDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYY 197 (466)
T ss_pred CCceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHh
Confidence 67999999999999999998653 468999999986211 111111 110 1112235677
Q ss_pred ccEEeEecHHHHHHHHHHHHHHhCcccCCCcee--eCCeEEEEEEeecccChhhhhhhhcCC-----------chHHHHH
Q 003508 165 ADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN-----------PVQVHIK 231 (814)
Q Consensus 165 ~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~--~~g~~~~i~v~p~GId~~~f~~~~~~~-----------~~~~~~~ 231 (814)
+|.|...++.+++..... ..| .++. +..+..++.+||||||++.|.+..... ...+..+
T Consensus 198 ad~vitvS~~~~~ei~~~---~~~-----~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~ 269 (466)
T PRK00654 198 ADRVTTVSPTYAREITTP---EFG-----YGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKR 269 (466)
T ss_pred cCcCeeeCHHHHHHhccc---cCC-----cChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHH
Confidence 888888887766553320 000 0000 111345788999999999887642100 0112234
Q ss_pred HHHHHhC----CCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhh
Q 003508 232 ELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRIN 307 (814)
Q Consensus 232 ~lr~~~~----~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN 307 (814)
.+|++++ +.++|++|||+.+.||++.+++|+++++++ ++.|+++|.+ . + .+++++++++.+.+
T Consensus 270 ~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~------~~~lvivG~g---~-~---~~~~~l~~l~~~~~ 336 (466)
T PRK00654 270 ALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ------GGQLVLLGTG---D-P---ELEEAFRALAARYP 336 (466)
T ss_pred HHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc------CCEEEEEecC---c-H---HHHHHHHHHHHHCC
Confidence 5666663 567999999999999999999999998753 2567777642 1 1 24566777776653
Q ss_pred cccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--C-----
Q 003508 308 GRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G----- 380 (814)
Q Consensus 308 ~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g----- 380 (814)
. .+.++.+. +.+.+..+|+.||+||+||.+||||++.+|||+|+ .|+|+|+.+|+.+.+ +
T Consensus 337 ~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G----~p~V~~~~gG~~e~v~~~~~~~~ 403 (466)
T PRK00654 337 G--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYG----TLPIVRRTGGLADTVIDYNPEDG 403 (466)
T ss_pred C--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCC----CCEEEeCCCCccceeecCCCCCC
Confidence 1 25545554 66677899999999999999999999999999994 899999999999988 4
Q ss_pred -CceEEECCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHHHh
Q 003508 381 -AGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 439 (814)
Q Consensus 381 -~~~~lvnP~d~~~lA~ai~~~L~~--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 439 (814)
.+|++|+|.|+++++++|.+++.. .++.++++..+.+ ...++|..-++++++..+++
T Consensus 404 ~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 404 EATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 579999999999999999999863 2233444444433 25688888888877665543
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-25 Score=269.37 Aligned_cols=309 Identities=15% Similarity=0.117 Sum_probs=220.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhh-----CCCCeEEEEEecCCCchhhhccCCCcHHHHHHH
Q 003508 88 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEY-----NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV 162 (814)
Q Consensus 88 w~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~-----~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~l 162 (814)
...|..+++..++.+.+.-..+||||+||+|..++|.++++. ..++++.+++|..-. ....+-.++
T Consensus 689 ~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~---------~~n~lk~~l 759 (1036)
T PLN02316 689 GERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF---------GANHIGKAM 759 (1036)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCccc---------chhHHHHHH
Confidence 444555566666655544346799999999999999999874 356889999996421 112234567
Q ss_pred hhccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcC--C-----c----h-HHHH
Q 003508 163 LAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI--N-----P----V-QVHI 230 (814)
Q Consensus 163 l~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~--~-----~----~-~~~~ 230 (814)
..+|.|...++.|++..... .. ...+..++.+||||||++.|.|.... + + . ....
T Consensus 760 ~~AD~ViTVS~tya~EI~~~----~~---------l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k 826 (1036)
T PLN02316 760 AYADKATTVSPTYSREVSGN----SA---------IAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAK 826 (1036)
T ss_pred HHCCEEEeCCHHHHHHHHhc----cC---------cccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhH
Confidence 78999999999887665431 00 01134578899999999988764210 0 0 0 1123
Q ss_pred HHHHHHhC----CCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHh
Q 003508 231 KELQETFA----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 306 (814)
Q Consensus 231 ~~lr~~~~----~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~i 306 (814)
..++++++ +.++|++||||.+.||+..+++|+.++++. + +.||++|.+ ++ ..++.++++++.++
T Consensus 827 ~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~G-----pd-~~~e~~l~~La~~L 894 (1036)
T PLN02316 827 EALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGSA-----PD-PRIQNDFVNLANQL 894 (1036)
T ss_pred HHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeCC-----CC-HHHHHHHHHHHHHh
Confidence 44677763 468999999999999999999999998863 2 557767642 22 23567788888877
Q ss_pred hcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--C----
Q 003508 307 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G---- 380 (814)
Q Consensus 307 N~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g---- 380 (814)
+..+. ..|.+ .+..+......+|+.||+||+||.+|||||+.+|||+|+ .|||+|..+|+.+.+ +
T Consensus 895 g~~~~----~rV~f-~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~G----tppVvs~vGGL~DtV~d~d~~~ 965 (1036)
T PLN02316 895 HSSHH----DRARL-CLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYG----SIPVVRKTGGLFDTVFDVDHDK 965 (1036)
T ss_pred CccCC----CeEEE-EecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcC----CCeEEEcCCCcHhhcccccccc
Confidence 54332 13554 344555444589999999999999999999999999994 799999999999887 2
Q ss_pred ---------CceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHH-HHcCHHHHHHHHHHHHHHh
Q 003508 381 ---------AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 439 (814)
Q Consensus 381 ---------~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 439 (814)
.+|++|+|.|+++++.+|.++|....+.+..+....++.+ ..++|.+-+++++.....+
T Consensus 966 ~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a 1034 (1036)
T PLN02316 966 ERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSA 1034 (1036)
T ss_pred ccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 3799999999999999999999864333333344444443 5689998888888766654
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-25 Score=249.90 Aligned_cols=272 Identities=18% Similarity=0.222 Sum_probs=203.3
Q ss_pred CCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccEEeEecHHHHHHHHHHHHHH
Q 003508 107 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 186 (814)
Q Consensus 107 ~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~DlIgf~~~~~~~~fl~~~~~~ 186 (814)
...|+|++|+.. .+...++++.+++++.+.+|..|.. +. +..++.|.+.+.. ...++. +.
T Consensus 98 ~~~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~-~~-------------~~~~~~ii~~S~~-~~~~~~---~~ 157 (380)
T PRK15484 98 TKDSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFEP-EL-------------LDKNAKIIVPSQF-LKKFYE---ER 157 (380)
T ss_pred CCCcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccCh-hH-------------hccCCEEEEcCHH-HHHHHH---hh
Confidence 357999999843 3445667788999999999987632 11 1235777776643 333322 11
Q ss_pred hCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhC---CCeEEEEeccccccCCHHHHHHHHH
Q 003508 187 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKLLAFE 263 (814)
Q Consensus 187 l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~---~~~vil~VgRld~~KGi~~~l~Af~ 263 (814)
+ ...++.++|+|||.+.|.+.. ...+++.++ ++++|+++||+.+.||+..+++|+.
T Consensus 158 ~-------------~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 158 L-------------PNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred C-------------CCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHHHH
Confidence 1 123578899999998876431 112334442 6789999999999999999999999
Q ss_pred HHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEEC
Q 003508 264 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 343 (814)
Q Consensus 264 ~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~ 343 (814)
++.+++|++ .|+++|.+......+...+.+++++++.+++. .|+ +.|.++.+++..+|+.||+||+|
T Consensus 217 ~l~~~~p~~----~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v~p 283 (380)
T PRK15484 217 KLATAHSNL----KLVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVVVP 283 (380)
T ss_pred HHHHhCCCe----EEEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEEeC
Confidence 998888874 58888865432212233566677777766531 355 57889999999999999999999
Q ss_pred CC-CccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceE-EECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHH
Q 003508 344 SL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAI-LVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 419 (814)
Q Consensus 344 S~-~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~-lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~ 419 (814)
|. .||||++++|||||| .|+|+|..+|..|.+ |.+|+ +++|.|++++|++|.++++++. +.++++++++.
T Consensus 284 S~~~E~f~~~~lEAma~G----~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~--~~~~~~~ar~~ 357 (380)
T PRK15484 284 SQVEEAFCMVAVEAMAAG----KPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPE--LTQIAEQAKDF 357 (380)
T ss_pred CCCccccccHHHHHHHcC----CCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHH
Confidence 97 499999999999994 899999999988887 56787 6789999999999999998763 45677777766
Q ss_pred -HHHcCHHHHHHHHHHHHHH
Q 003508 420 -VTTHTAQEWAETFVSELND 438 (814)
Q Consensus 420 -v~~~~~~~W~~~fl~~l~~ 438 (814)
.++|++..-++++++.++.
T Consensus 358 ~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 358 VFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred HHHhCCHHHHHHHHHHHHHH
Confidence 5788999999999888765
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=256.67 Aligned_cols=319 Identities=14% Similarity=0.158 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchh--hhc------------cCC
Q 003508 88 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSE--IHR------------TLP 153 (814)
Q Consensus 88 w~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e--~~~------------~lp 153 (814)
|.....+...+...+.+.....|+||+|+++..+++.++++.. +.|+.++.|....... +.. .+.
T Consensus 94 ~~~~~~~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (439)
T TIGR02472 94 WPYLDELADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNIS 172 (439)
T ss_pred hhhHHHHHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchH
Confidence 4333444444444444333356999999987777777776644 5789999997532110 000 000
Q ss_pred CcHH-HHHHHhhccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHH
Q 003508 154 SRSD-LLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKE 232 (814)
Q Consensus 154 ~~~~-il~~ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~ 232 (814)
.+-. ....+..+|.|...+...+...+. ...+. ...++.++|||||++.|.+.....+.....+.
T Consensus 173 ~~~~~~~~~~~~ad~ii~~s~~~~~~~~~---~~~~~-----------~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~ 238 (439)
T TIGR02472 173 RRIEAEEETLAHASLVITSTHQEIEEQYA---LYDSY-----------QPERMQVIPPGVDLSRFYPPQSSEETSEIDNL 238 (439)
T ss_pred HHHHHHHHHHHhCCEEEECCHHHHHHHHH---hccCC-----------CccceEEECCCcChhhcCCCCccccchhHHHH
Confidence 0000 112344678777666543222111 10011 24578899999999999764322111111112
Q ss_pred HHHHh--CCCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecC-CCCChH-HHHHHHHHHHHHHHHhhc
Q 003508 233 LQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVP-TRTDVP-EYQRLTSQVHEIVGRING 308 (814)
Q Consensus 233 lr~~~--~~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p-~r~~~~-~~~~l~~~l~~lv~~iN~ 308 (814)
+++.. .++++|++|||+++.||++.+|+||+++.+..+.. ++++ ++|.+ .+.... ...++.+++..++++++
T Consensus 239 ~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~~~~~l~~~~~~~~~~~~~~~~~~~- 314 (439)
T TIGR02472 239 LAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRDDIRKMESQQREVLQKVLLLIDRYD- 314 (439)
T ss_pred HHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCccccccccHHHHHHHHHHHHHHHHcC-
Confidence 22221 36789999999999999999999998653211111 2333 23431 111110 11123344555555543
Q ss_pred ccCCCCcccEEEecCCCCHHHHHHHHHhc----cEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCc
Q 003508 309 RFGTLTAVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAG 382 (814)
Q Consensus 309 ~~g~~~~~~V~~~~g~v~~~el~aly~~A----Dv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~ 382 (814)
..+ .|+ |.|.++.+++..+|+.| |+||+||.+||||++++|||||+ .|+|+|+.+|+.+.+ |.+
T Consensus 315 ---l~~--~V~-f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G----~PvV~s~~gg~~eiv~~~~~ 384 (439)
T TIGR02472 315 ---LYG--KVA-YPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACG----LPIVATDDGGPRDIIANCRN 384 (439)
T ss_pred ---CCc--eEE-ecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhC----CCEEEeCCCCcHHHhcCCCc
Confidence 222 355 67889999999999988 99999999999999999999995 899999999999888 468
Q ss_pred eEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHH-HHcCHHHHHHHHHHHH
Q 003508 383 AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 436 (814)
Q Consensus 383 ~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 436 (814)
|++|+|.|++++|++|.++++++ +++.++.+++++++ +.|+|..-++++++-|
T Consensus 385 G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 385 GLLVDVLDLEAIASALEDALSDS-SQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred EEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99999999999999999999864 57778888888876 5688888787776544
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-25 Score=254.75 Aligned_cols=320 Identities=14% Similarity=0.178 Sum_probs=217.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhC------CCCeEEEEEecCCC----chhhhcc-CCCc
Q 003508 87 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPFP----SSEIHRT-LPSR 155 (814)
Q Consensus 87 ~w~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~------~~~~i~~f~H~Pfp----~~e~~~~-lp~~ 155 (814)
....|.-++++.++.+.+.--.+||||+||+|.-++|.+++++. .++|++++.|.... +.+.+.. +|..
T Consensus 120 ~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~ 199 (489)
T PRK14098 120 SAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEE 199 (489)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHH
Confidence 35556666666666655432256999999999999999998753 37899999998521 1111111 2211
Q ss_pred ------------HHHHHHHhhccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcC
Q 003508 156 ------------SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI 223 (814)
Q Consensus 156 ------------~~il~~ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~ 223 (814)
.-+-.++..||.|...++.|++...+....-.|++ .. ...+..++.+||||||++.|.|....
T Consensus 200 ~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~---~~--l~~~~~kl~~I~NGID~~~~~p~~d~ 274 (489)
T PRK14098 200 VCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLD---KV--LEERKMRLHGILNGIDTRQWNPSTDK 274 (489)
T ss_pred hhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChH---HH--HHhcCCCeeEEeCCccccccCCcccc
Confidence 11234577889998888887765432000001110 00 11134678899999999998764321
Q ss_pred C--------c---hHHHHHHHHHHhC-----CCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCC
Q 003508 224 N--------P---VQVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 287 (814)
Q Consensus 224 ~--------~---~~~~~~~lr~~~~-----~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~ 287 (814)
. . ..+....+++.++ +.++|++|||+.+.||++.+++|+.++.+. ++.|+++|.+
T Consensus 275 ~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~------~~~lvivG~G--- 345 (489)
T PRK14098 275 LIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL------DIQLVICGSG--- 345 (489)
T ss_pred cccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc------CcEEEEEeCC---
Confidence 0 0 0011234555552 467999999999999999999999998752 3668877742
Q ss_pred ChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceE
Q 003508 288 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVL 367 (814)
Q Consensus 288 ~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~v 367 (814)
+. .+++++++++.+.. ..|. +.+.++.+++..+|+.||+||+||.+||||++.+|||+|+ .|+
T Consensus 346 --~~--~~~~~l~~l~~~~~--------~~V~-~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G----~pp 408 (489)
T PRK14098 346 --DK--EYEKRFQDFAEEHP--------EQVS-VQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG----TIP 408 (489)
T ss_pred --CH--HHHHHHHHHHHHCC--------CCEE-EEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC----CCe
Confidence 21 24566777766542 1255 4577899999999999999999999999999999999994 799
Q ss_pred EEeCCCCccccc------CCceEEECCCCHHHHHHHHHHHhcC--CHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHHHh
Q 003508 368 ILSEFAGAAQSL------GAGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 439 (814)
Q Consensus 368 VlS~~~G~~e~l------g~~~~lvnP~d~~~lA~ai~~~L~~--~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 439 (814)
|++..+|..+.+ +.+|++|+|.|+++++++|.+++.. .++.++++.++. ..+.++|..-++++++..+++
T Consensus 409 Vv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~--~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 409 VAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA--MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred EEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH--hcCCCChHHHHHHHHHHHHHH
Confidence 999999998776 3589999999999999999998742 233333333332 235788888888887666543
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=249.80 Aligned_cols=299 Identities=23% Similarity=0.197 Sum_probs=206.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccE
Q 003508 88 FAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADL 167 (814)
Q Consensus 88 w~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~Dl 167 (814)
+..|...+..++.++.. ..+.|+||+|+++.+.++...+. .+.|+.++.|+++.... . ..++.+...+..+|.
T Consensus 66 ~~~~~~~~~~~~~~~~~-~~~~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~~~d~ 138 (372)
T cd03792 66 KEIYLEWNEENAERPLL-DLDADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIEDYDA 138 (372)
T ss_pred HHHHHHHHHHHhccccc-cCCCCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHHhCCE
Confidence 67787777777655322 22579999999998777665543 36788889999875321 0 011223333456788
Q ss_pred EeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---CCCeEEE
Q 003508 168 VGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVML 244 (814)
Q Consensus 168 Igf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil 244 (814)
+.+.+.+++..+ +. ..++ ++|+|||+........ ..+....+++++ .++++|+
T Consensus 139 ~i~~~~~~~~~~------------------~~--~~~~-vipngvd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~ 194 (372)
T cd03792 139 AVFHLPEYVPPQ------------------VP--PRKV-IIPPSIDPLSGKNREL---SPADIEYILEKYGIDPERPYIT 194 (372)
T ss_pred EeecHHHhcCCC------------------CC--CceE-EeCCCCCCCccccCCC---CHHHHHHHHHHhCCCCCCcEEE
Confidence 777663322110 11 1233 8999999753211111 112334456666 3678999
Q ss_pred EeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCC
Q 003508 245 GVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 324 (814)
Q Consensus 245 ~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~ 324 (814)
+|||+++.||++.+|+||+.+.++.|++ .|+++|.+... .+++.++. +++.++.+. . ..|.++...
T Consensus 195 ~vgrl~~~Kg~~~ll~a~~~l~~~~~~~----~l~i~G~g~~~-~~~~~~~~---~~~~~~~~~----~--~~v~~~~~~ 260 (372)
T cd03792 195 QVSRFDPWKDPFGVIDAYRKVKERVPDP----QLVLVGSGATD-DPEGWIVY---EEVLEYAEG----D--PDIHVLTLP 260 (372)
T ss_pred EEeccccccCcHHHHHHHHHHHhhCCCC----EEEEEeCCCCC-CchhHHHH---HHHHHHhCC----C--CCeEEEecC
Confidence 9999999999999999999998877764 58878764321 12232322 233322221 1 236654333
Q ss_pred -CCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHH
Q 003508 325 -LDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARA 401 (814)
Q Consensus 325 -v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~ 401 (814)
++.+++..+|++||+||+||.+||||++++|||||+ .|+|+|+.+|..+.+ |.+|+++++ .+++|++|.++
T Consensus 261 ~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G----~Pvv~s~~~~~~~~i~~~~~g~~~~~--~~~~a~~i~~l 334 (372)
T cd03792 261 PVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKG----KPVIAGPVGGIPLQIEDGETGFLVDT--VEEAAVRILYL 334 (372)
T ss_pred CCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC----CCEEEcCCCCchhhcccCCceEEeCC--cHHHHHHHHHH
Confidence 489999999999999999999999999999999995 899999999999888 578898874 57889999999
Q ss_pred hcCCHHHHHHHHHHHhHHH-HHcCHHHHHHHHHHHHHH
Q 003508 402 LNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 438 (814)
Q Consensus 402 L~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 438 (814)
+++ ++++.++.+++++.+ +.+++...++++++.++.
T Consensus 335 l~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 335 LRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred HcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 986 457788888888876 579999999998877654
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-25 Score=255.31 Aligned_cols=311 Identities=22% Similarity=0.283 Sum_probs=214.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhCC--CCeEEEEEecCCC----chhhhcc--CCCc-------
Q 003508 91 YIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS--DMKVGWFLHTPFP----SSEIHRT--LPSR------- 155 (814)
Q Consensus 91 Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~--~~~i~~f~H~Pfp----~~e~~~~--lp~~------- 155 (814)
+..+++..++.+...-...||||+||+|..++|.++++... ++|+.++.|.... +.+.+.. +|..
T Consensus 111 ~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 190 (473)
T TIGR02095 111 FAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGL 190 (473)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhh
Confidence 33344444444443333679999999999999999988654 3899999998642 1222221 1110
Q ss_pred -----H-HHHHHHhhccEEeEecHHHHHHHHHHHHHHhCcccCCCcee--eCCeEEEEEEeecccChhhhhhhhcCC---
Q 003508 156 -----S-DLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRALEIN--- 224 (814)
Q Consensus 156 -----~-~il~~ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~--~~g~~~~i~v~p~GId~~~f~~~~~~~--- 224 (814)
- .+..++..+|.|...++.+++..... ..+. +++ +..+..++.+||||||.+.|.+.....
T Consensus 191 ~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~-----~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~ 262 (473)
T TIGR02095 191 EFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGY-----GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKA 262 (473)
T ss_pred hcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCc-----cchhHHHhcCCCeEEEeCCCCccccCCCCCccccc
Confidence 1 12235667888888887776554321 0010 000 011345788999999999887542110
Q ss_pred --------chHHHHHHHHHHhC-----CCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHH
Q 003508 225 --------PVQVHIKELQETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPE 291 (814)
Q Consensus 225 --------~~~~~~~~lr~~~~-----~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~ 291 (814)
...+....++++++ ++++|++|||+.+.||++.+++|++++.++. +.|+++|.+ + +
T Consensus 263 ~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g---~-~- 331 (473)
T TIGR02095 263 NYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG---D-P- 331 (473)
T ss_pred CcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC---C-H-
Confidence 00112345666663 5789999999999999999999999987542 567777642 1 2
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeC
Q 003508 292 YQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE 371 (814)
Q Consensus 292 ~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~ 371 (814)
.+++++++++.+.+. .+.++ +..+.+++..+|+.||++|+||.+||||++.+|||+|+ .|+|+|+
T Consensus 332 --~~~~~l~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----~pvI~s~ 396 (473)
T TIGR02095 332 --ELEEALRELAERYPG--------NVRVI-IGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYG----TVPIVRR 396 (473)
T ss_pred --HHHHHHHHHHHHCCC--------cEEEE-EcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCC----CCeEEcc
Confidence 245666777654321 25543 45688889999999999999999999999999999994 8999999
Q ss_pred CCCccccc--C------CceEEECCCCHHHHHHHHHHHhcC---CHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHH
Q 003508 372 FAGAAQSL--G------AGAILVNPWNITEVANAIARALNM---SPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 437 (814)
Q Consensus 372 ~~G~~e~l--g------~~~~lvnP~d~~~lA~ai~~~L~~---~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 437 (814)
.+|..+.+ + .+|++++|.|+++++++|.+++.+ .++.++++.++.+ .+.++|.+-++++++..+
T Consensus 397 ~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 397 TGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred CCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 99999988 4 679999999999999999999872 3344555544443 257888888888876654
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=251.14 Aligned_cols=296 Identities=20% Similarity=0.215 Sum_probs=200.5
Q ss_pred CCCEEEEeCccchhHHHHHHhh-CCCCeEEEEEecC-----CCchhhhcc--CCC------c-------HHHHHHHhhcc
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTP-----FPSSEIHRT--LPS------R-------SDLLRAVLAAD 166 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~-~~~~~i~~f~H~P-----fp~~e~~~~--lp~------~-------~~il~~ll~~D 166 (814)
.+||||+||+|..++|.+++.. ..+++++++.|.. ||. ..+.. +|. . ..+-.++..+|
T Consensus 133 ~pDIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad 211 (485)
T PRK14099 133 VPDIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLAD 211 (485)
T ss_pred CCCEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcC
Confidence 5699999999999999998753 3467899999975 221 11111 111 0 11334567788
Q ss_pred EEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCC-----c------hHHHHHHHHH
Q 003508 167 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN-----P------VQVHIKELQE 235 (814)
Q Consensus 167 lIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~-----~------~~~~~~~lr~ 235 (814)
.|...++.+++.....- .-.|++. . +..+..++.+||||||++.|.+..... . .....+.+++
T Consensus 212 ~vitVS~~~a~ei~~~~-~g~gl~~---~--l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~ 285 (485)
T PRK14099 212 RITTVSPTYALEIQGPE-AGMGLDG---L--LRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQA 285 (485)
T ss_pred eeeecChhHHHHHhccc-CCcChHH---H--HHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHH
Confidence 88877877665543200 0001000 0 011345788999999999987653210 0 0011234666
Q ss_pred HhC-----CCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhccc
Q 003508 236 TFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 310 (814)
Q Consensus 236 ~~~-----~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~ 310 (814)
+++ +.++|++|||+.+.||++.+++|++++++. ++.|+++|.+ + + .+++++++++.+..
T Consensus 286 ~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~------~~~lvivG~G---~-~---~~~~~l~~l~~~~~--- 349 (485)
T PRK14099 286 RFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE------GAQLALLGSG---D-A---ELEARFRAAAQAYP--- 349 (485)
T ss_pred HcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc------CcEEEEEecC---C-H---HHHHHHHHHHHHCC---
Confidence 663 356788999999999999999999998753 2557777742 1 1 24556666665432
Q ss_pred CCCCcccEEEecCCCCHHHHHHHHH-hccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--C-------
Q 003508 311 GTLTAVPIHHLDRSLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G------- 380 (814)
Q Consensus 311 g~~~~~~V~~~~g~v~~~el~aly~-~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g------- 380 (814)
..+.++.|+ ++++..+|. .||+||+||.+||||++.+|||+|+ +|+|+|..+|+.+.+ +
T Consensus 350 -----~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G----~ppVvs~~GGl~d~V~~~~~~~~~~ 418 (485)
T PRK14099 350 -----GQIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG----AVPVVARVGGLADTVVDANEMAIAT 418 (485)
T ss_pred -----CCEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCC----CCcEEeCCCCccceeeccccccccc
Confidence 124445665 678888775 6999999999999999999999994 689999999998877 2
Q ss_pred --CceEEECCCCHHHHHHHHHHH---hcCCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHHHhH
Q 003508 381 --AGAILVNPWNITEVANAIARA---LNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 440 (814)
Q Consensus 381 --~~~~lvnP~d~~~lA~ai~~~---L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 440 (814)
.+|++|+|.|+++++++|.++ +++ ++.++++.++++ .+.++|.+-++++++..+++.
T Consensus 419 ~~~~G~l~~~~d~~~La~ai~~a~~l~~d-~~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 419 GVATGVQFSPVTADALAAALRKTAALFAD-PVAWRRLQRNGM--TTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred CCCceEEeCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHhh--hhcCChHHHHHHHHHHHHHHH
Confidence 379999999999999999984 443 445555555544 467888888888877666543
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-24 Score=244.22 Aligned_cols=276 Identities=17% Similarity=0.126 Sum_probs=202.1
Q ss_pred CCCEEEEeCccchhHHHHHHhh-CCCCeEEEEEecCCCc-hhhhccCCCcHHHHHHHhhccEEeEecHHHHHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPS-SEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTR 185 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~-~~~~~i~~f~H~Pfp~-~e~~~~lp~~~~il~~ll~~DlIgf~~~~~~~~fl~~~~~ 185 (814)
+.|+||.|..+.-.+..++++. ....++.+++|.+-.. ..+.. ..+..+-+.+-.+|.|...+....+.+. +
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~----~ 191 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQ----K 191 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHH----H
Confidence 4699999987766667777663 2244567788865211 11110 0112233334578998877764433332 1
Q ss_pred HhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHHHHHHH
Q 003508 186 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 265 (814)
Q Consensus 186 ~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~Af~~l 265 (814)
+|. ...++.++|+|||.+.|.+.... ...+...|++|||+.+.||++.+|+|++.+
T Consensus 192 -~g~-----------~~~ki~vi~nGvd~~~f~~~~~~------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l 247 (406)
T PRK15427 192 -MGC-----------PPEKIAVSRMGVDMTRFSPRPVK------------APATPLEIISVARLTEKKGLHVAIEACRQL 247 (406)
T ss_pred -cCC-----------CHHHEEEcCCCCCHHHcCCCccc------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHH
Confidence 122 23467889999999988643110 113456799999999999999999999999
Q ss_pred HHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCC
Q 003508 266 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 345 (814)
Q Consensus 266 l~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~ 345 (814)
.+++|+ +.|+++|. ++. ++++++++.+.+. .+.+.|.|.++++++..+|+.||+||+||.
T Consensus 248 ~~~~~~----~~l~ivG~-----G~~----~~~l~~~~~~~~l-------~~~V~~~G~~~~~el~~~l~~aDv~v~pS~ 307 (406)
T PRK15427 248 KEQGVA----FRYRILGI-----GPW----ERRLRTLIEQYQL-------EDVVEMPGFKPSHEVKAMLDDADVFLLPSV 307 (406)
T ss_pred HhhCCC----EEEEEEEC-----chh----HHHHHHHHHHcCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEECCc
Confidence 887776 45777763 332 4456666665432 123346899999999999999999999998
Q ss_pred C------ccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q 003508 346 R------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 417 (814)
Q Consensus 346 ~------EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~ 417 (814)
. ||||++++|||||+ .|+|+|+.+|+.|.+ |.+|++|+|.|++++|++|.++++++++++++++++++
T Consensus 308 ~~~~g~~Eg~p~~llEAma~G----~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar 383 (406)
T PRK15427 308 TGADGDMEGIPVALMEAMAVG----IPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAAFSQLDTDELAPVVKRAR 383 (406)
T ss_pred cCCCCCccCccHHHHHHHhCC----CCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4 99999999999995 899999999999988 67899999999999999999999966678888888898
Q ss_pred HHH-HHcCHHHHHHHHHHHHH
Q 003508 418 THV-TTHTAQEWAETFVSELN 437 (814)
Q Consensus 418 ~~v-~~~~~~~W~~~fl~~l~ 437 (814)
+++ +.|++...++++.+.++
T Consensus 384 ~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 384 EKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHHHHhcCHHHHHHHHHHHHh
Confidence 886 56899888888876654
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.6e-24 Score=238.70 Aligned_cols=289 Identities=19% Similarity=0.196 Sum_probs=212.6
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhc---cCCC--cHHHHH--HHhhccEEeEecHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR---TLPS--RSDLLR--AVLAADLVGFHTYDYARHFV 180 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~---~lp~--~~~il~--~ll~~DlIgf~~~~~~~~fl 180 (814)
..|+||+|++....++.++++. .+.|+.+++|..+.-...+. ..|. ...+++ .+..+|.|.+.+....+.+.
T Consensus 101 ~~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~ 179 (405)
T TIGR03449 101 YYDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLV 179 (405)
T ss_pred CCCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHH
Confidence 5799999987665566666553 46788899997532111110 0111 122222 34568999999987776655
Q ss_pred HHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---CCCeEEEEeccccccCCHHH
Q 003508 181 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 257 (814)
Q Consensus 181 ~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VgRld~~KGi~~ 257 (814)
. ..+. ...++.++|+|||.+.|.+.. ....++++ .++++|+++||+.+.||+..
T Consensus 180 ~----~~~~-----------~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~l~~~K~~~~ 236 (405)
T TIGR03449 180 R----HYDA-----------DPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGRIQPLKAPDV 236 (405)
T ss_pred H----HcCC-----------ChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecCCCcccCHHH
Confidence 3 1121 235788999999998886431 11234444 36789999999999999999
Q ss_pred HHHHHHHHHHhCccccCceEEEEEecCCCCCh-HHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 003508 258 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV-PEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 336 (814)
Q Consensus 258 ~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~-~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ 336 (814)
+++|++++++++|+. ++.|+++|.+.. ++ +. .+++++++.+++.. ..|+ |.|.++.+++..+|+.
T Consensus 237 li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~----~~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~l~~ 302 (405)
T TIGR03449 237 LLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLAT----PDALIELAAELGIA------DRVR-FLPPRPPEELVHVYRA 302 (405)
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchH----HHHHHHHHHHcCCC------ceEE-ECCCCCHHHHHHHHHh
Confidence 999999999888873 477888886542 22 22 33455565554321 1355 6789999999999999
Q ss_pred ccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 003508 337 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHW 414 (814)
Q Consensus 337 ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~ 414 (814)
||++|+||..||||++++|||+|+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ +.+.++..
T Consensus 303 ad~~v~ps~~E~~g~~~lEAma~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~-~~~~~~~~ 377 (405)
T TIGR03449 303 ADVVAVPSYNESFGLVAMEAQACG----TPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDP-RTRIRMGA 377 (405)
T ss_pred CCEEEECCCCCCcChHHHHHHHcC----CCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCH-HHHHHHHH
Confidence 999999999999999999999994 899999999988877 56899999999999999999999854 56677777
Q ss_pred HHhHHHHHcCHHHHHHHHHHHHHHh
Q 003508 415 HNFTHVTTHTAQEWAETFVSELNDT 439 (814)
Q Consensus 415 ~~~~~v~~~~~~~W~~~fl~~l~~~ 439 (814)
++++.++.++|...++++++.+.+.
T Consensus 378 ~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 378 AAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7888888899999998888766643
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-24 Score=241.72 Aligned_cols=300 Identities=17% Similarity=0.173 Sum_probs=203.2
Q ss_pred HHHHHHHHHHHHHhC-C--CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCc--hhh-hc-cCCCc--------H
Q 003508 92 IKANQMFADVVNKHY-K--DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEI-HR-TLPSR--------S 156 (814)
Q Consensus 92 ~~vN~~fa~~i~~~~-~--~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~--~e~-~~-~lp~~--------~ 156 (814)
...++.....+.... + .+|+|+.|. .+....++++..|++++..+.|..+-. .+. |. ..+.+ .
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~pdvi~~h~--~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (396)
T cd03818 68 VLRGQAVARALLALRAKGFRPDVIVAHP--GWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRN 145 (396)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEECC--ccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHH
Confidence 333444444444431 1 469999994 556667889989999988777644321 010 11 11111 1
Q ss_pred H---HHHHHhhccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHH
Q 003508 157 D---LLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKEL 233 (814)
Q Consensus 157 ~---il~~ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~l 233 (814)
. ....+..+|.|...+......|.. . + ..++.++|+|||.+.|.+.... ...+
T Consensus 146 ~~~~~~~~~~~ad~vi~~s~~~~~~~~~----~-----------~---~~ki~vI~ngvd~~~f~~~~~~------~~~~ 201 (396)
T cd03818 146 RNALILLALAQADAGVSPTRWQRSTFPA----E-----------L---RSRISVIHDGIDTDRLRPDPQA------RLRL 201 (396)
T ss_pred hhhHhHHHHHhCCEEECCCHHHHhhCcH----h-----------h---ccceEEeCCCccccccCCCchh------hhcc
Confidence 1 123466788888766543333221 0 1 1468899999999988754211 1111
Q ss_pred HHHh---CCCeEEEEecc-ccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHH---HHHHHHHHHHHHHHh
Q 003508 234 QETF---AGRKVMLGVDR-LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPE---YQRLTSQVHEIVGRI 306 (814)
Q Consensus 234 r~~~---~~~~vil~VgR-ld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~---~~~l~~~l~~lv~~i 306 (814)
+... .++++|+++|| +.+.||++.+++|+.++.++.|++ .|+++|......+.. -..++ +++.+++
T Consensus 202 ~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~----~lvivG~~~~~~g~~~~~~~~~~---~~~~~~~ 274 (396)
T cd03818 202 PNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDA----RVVIVGGDGVSYGAPPPDGESWK---QHMLDEL 274 (396)
T ss_pred cccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCc----EEEEEcCCCcccCCCCCCcccHH---HHHHHHh
Confidence 1111 36788999998 999999999999999998888875 478777532110100 00112 1222333
Q ss_pred hcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceE
Q 003508 307 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAI 384 (814)
Q Consensus 307 N~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~ 384 (814)
+.+.+ ...|+ |.|.++.+++..+|+.||++|+||..||||++++|||||+ .|+|+|+.+|..+.+ |.+|+
T Consensus 275 ~~~~~---~~~V~-f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G----~PVIas~~~g~~e~i~~~~~G~ 346 (396)
T cd03818 275 GGRLD---LSRVH-FLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACG----CLVVGSDTAPVREVITDGENGL 346 (396)
T ss_pred hcccC---cceEE-EeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCC----CCEEEcCCCCchhhcccCCceE
Confidence 22111 12365 5799999999999999999999999999999999999995 899999999988888 56899
Q ss_pred EECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHH-cCHHHHHHHHH
Q 003508 385 LVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFV 433 (814)
Q Consensus 385 lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~-~~~~~W~~~fl 433 (814)
+|+|.|++++|++|.++++++ +++.++.+++++++++ +++..-+++++
T Consensus 347 lv~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 347 LVDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred EcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 999999999999999999865 5778888889988876 77766666554
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-23 Score=247.68 Aligned_cols=331 Identities=14% Similarity=0.154 Sum_probs=216.1
Q ss_pred HHHHHHHHHHHHHHHHHhCC-CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCC----chh-hhccCCCc----HH
Q 003508 88 FAAYIKANQMFADVVNKHYK-DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SSE-IHRTLPSR----SD 157 (814)
Q Consensus 88 w~~Y~~vN~~fa~~i~~~~~-~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp----~~e-~~~~lp~~----~~ 157 (814)
|..-..++...++.+..... .+|+||.|.+.--+++..++++. ++|..++.|..-. ... .+..+..+ .+
T Consensus 364 ~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r 442 (784)
T TIGR02470 364 WPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQ 442 (784)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhhhh
Confidence 77777777777776664433 57999999988778888887765 6887777785411 000 01111000 00
Q ss_pred ---HHHHHhhccEEeEecHHHHHHHHHHHHH-----HhCccc---CCCceeeCCeEEEEEEeecccChhhhhhhhcCCch
Q 003508 158 ---LLRAVLAADLVGFHTYDYARHFVSACTR-----ILGFEG---TPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPV 226 (814)
Q Consensus 158 ---il~~ll~~DlIgf~~~~~~~~fl~~~~~-----~l~~~~---~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~ 226 (814)
-+..|..||.|.-.|++....-...+.. .++... .-+++.+ ...++.++|+|+|++.|.+......-
T Consensus 443 ~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~--~~~Ki~VVpPGVD~~iF~P~~~~~~r 520 (784)
T TIGR02470 443 FTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDV--FDPKFNIVSPGADESIYFPYSDKEKR 520 (784)
T ss_pred hhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccC--CcCCeEEECCCcChhhcCCCCchhhh
Confidence 1245667999998887543211111111 011100 0011211 23478899999999998764321100
Q ss_pred H-HHH----------HHHHHHh-----CCCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCC---
Q 003508 227 Q-VHI----------KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT--- 287 (814)
Q Consensus 227 ~-~~~----------~~lr~~~-----~~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~--- 287 (814)
. ... ...++.+ .++++|++|||+++.||+..+++||.++.+.. ..+.||+||++...
T Consensus 521 ~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~----~~~~LVIVGGg~~~~~s 596 (784)
T TIGR02470 521 LTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLR----ELVNLVVVAGKLDAKES 596 (784)
T ss_pred hhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhC----CCeEEEEEeCCcccccc
Confidence 0 000 0112333 26789999999999999999999998764322 34678888864321
Q ss_pred ChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCC-CCHHHHHHHHH----hccEEEECCCCccCChhHHHHhhhccC
Q 003508 288 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS-LDFPALCALYA----VTDVALVTSLRDGMNLVSYEFVACQDL 362 (814)
Q Consensus 288 ~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~-v~~~el~aly~----~ADv~v~~S~~EG~~Lv~lEama~~~~ 362 (814)
...+..+..+++.+++++.+. .+ .|.+ .|. .+..++..+|+ .+||||+||.+|||||+++||||||
T Consensus 597 ~d~ee~~~i~~L~~la~~~gL----~g--~V~f-lG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcG-- 667 (784)
T TIGR02470 597 KDREEQAEIEKMHNLIDQYQL----HG--QIRW-IGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCG-- 667 (784)
T ss_pred cchhHHHHHHHHHHHHHHhCC----CC--eEEE-ccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcC--
Confidence 111222344566777766542 22 3664 555 35666667776 2479999999999999999999995
Q ss_pred CCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHhHHH-HHcCHHHHHHHHHHHH
Q 003508 363 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 436 (814)
Q Consensus 363 ~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~---~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 436 (814)
.|+|+|..+|..+.+ |.+|++|+|.|++++|++|.+++. ..++.+.++..++++++ ++|+|...++++++..
T Consensus 668 --lPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 668 --LPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred --CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 899999999999988 679999999999999999999873 34556777778888876 6789999888887654
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-23 Score=241.83 Aligned_cols=312 Identities=22% Similarity=0.266 Sum_probs=212.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhC-----CCCeEEEEEecCCCch----hhhcc--CCC---
Q 003508 89 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYN-----SDMKVGWFLHTPFPSS----EIHRT--LPS--- 154 (814)
Q Consensus 89 ~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~-----~~~~i~~f~H~Pfp~~----e~~~~--lp~--- 154 (814)
..|..+++...+.+.+.-...|+||+||+|..++|.+++... .+.++.|+.|.+.+.. ..+.. +++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~ 189 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEEL 189 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccch
Confidence 334444555555444443467999999999999999998763 5789999999874321 11111 010
Q ss_pred ----------c-HHHHHHHhhccEEeEecHHHHHHHHHHHHHHhCcccCCCcee--eCCeEEEEEEeecccChhhhhhhh
Q 003508 155 ----------R-SDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVE--DQGRLTRVAAFPIGIDSERFIRAL 221 (814)
Q Consensus 155 ----------~-~~il~~ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~--~~g~~~~i~v~p~GId~~~f~~~~ 221 (814)
. ..+..++..+|.|...++.+++...+.- .| .+++ ...+..++.+||||||.+.|.+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~---~~-----~gl~~~~~~~~~ki~~I~NGid~~~~~p~~ 261 (476)
T cd03791 190 FHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE---FG-----EGLDGLLRARAGKLSGILNGIDYDVWNPAT 261 (476)
T ss_pred hhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC---CC-----cchHHHHHhccCCeEEEeCCCcCcccCccc
Confidence 1 1223446678888888877766543210 00 0000 111346788999999999887643
Q ss_pred cCC-----------chHHHHHHHHHHh-----CCCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCC
Q 003508 222 EIN-----------PVQVHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT 285 (814)
Q Consensus 222 ~~~-----------~~~~~~~~lr~~~-----~~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~ 285 (814)
... ........+++++ .++++|+++||+.+.||++.+++|++++.++. +.|+++|.+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g- 334 (476)
T cd03791 262 DPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVILGSG- 334 (476)
T ss_pred cchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEEecC-
Confidence 211 0112234466665 36789999999999999999999999987643 567777742
Q ss_pred CCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCc
Q 003508 286 RTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG 365 (814)
Q Consensus 286 r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g 365 (814)
+ + .+.+++++++.+.. ..++++.+ .+.+++..+|+.||++|+||.+||||++.+|||+|+ .
T Consensus 335 --~-~---~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G----~ 395 (476)
T cd03791 335 --D-P---EYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYG----T 395 (476)
T ss_pred --C-H---HHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCC----C
Confidence 1 2 24555666655431 13665555 457788899999999999999999999999999994 8
Q ss_pred eEEEeCCCCccccc--CC------ceEEECCCCHHHHHHHHHHHhcCC--HHHHHHHHHHHhHHHHHcCHHHHHHHHHHH
Q 003508 366 VLILSEFAGAAQSL--GA------GAILVNPWNITEVANAIARALNMS--PEEREKRHWHNFTHVTTHTAQEWAETFVSE 435 (814)
Q Consensus 366 ~vVlS~~~G~~e~l--g~------~~~lvnP~d~~~lA~ai~~~L~~~--~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 435 (814)
|+|+|+.+|..+.+ +. +|++|+|.|+++++++|.+++.+. ++++.++.++.++ ..++|..-++++++.
T Consensus 396 pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~ 473 (476)
T cd03791 396 VPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLEL 473 (476)
T ss_pred CCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHH
Confidence 99999999999988 34 899999999999999999998632 3344444444333 357777777777654
Q ss_pred H
Q 003508 436 L 436 (814)
Q Consensus 436 l 436 (814)
+
T Consensus 474 y 474 (476)
T cd03791 474 Y 474 (476)
T ss_pred H
Confidence 4
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-23 Score=244.12 Aligned_cols=331 Identities=15% Similarity=0.145 Sum_probs=211.9
Q ss_pred HHHHHHHHHHHHHHHHHhCC-CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCC----chhh-hccCC------Cc
Q 003508 88 FAAYIKANQMFADVVNKHYK-DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SSEI-HRTLP------SR 155 (814)
Q Consensus 88 w~~Y~~vN~~fa~~i~~~~~-~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp----~~e~-~~~lp------~~ 155 (814)
|..-..++...++.+....+ .+|+||-|++.--+++..++++. ++|.+++.|.--. ..+. +.... .+
T Consensus 387 ~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r 465 (815)
T PLN00142 387 WPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQ 465 (815)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhhhhc
Confidence 77777777777776654333 57999999877778888887765 7889899894310 0000 00000 11
Q ss_pred --HHHHHHHhhccEEeEecHHHHHHHHHHHHHHhCc-ccC-C------CceeeCCeEEEEEEeecccChhhhhhhhcCCc
Q 003508 156 --SDLLRAVLAADLVGFHTYDYARHFVSACTRILGF-EGT-P------EGVEDQGRLTRVAAFPIGIDSERFIRALEINP 225 (814)
Q Consensus 156 --~~il~~ll~~DlIgf~~~~~~~~fl~~~~~~l~~-~~~-~------~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~ 225 (814)
.+ ...|..||.|...++.........+.++-.. ..+ + .++.+. ..++.++|+|+|...|.+......
T Consensus 466 ~~aE-~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F~P~~~~~~ 542 (815)
T PLN00142 466 FTAD-LIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIYFPYTEKQK 542 (815)
T ss_pred hHHH-HHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhcCCCChHHh
Confidence 11 1245567777766654332111000000000 000 0 112221 227888999999998875321100
Q ss_pred --------hHHHH---HHHHHHh-----CCCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCC-CCC
Q 003508 226 --------VQVHI---KELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT-RTD 288 (814)
Q Consensus 226 --------~~~~~---~~lr~~~-----~~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~-r~~ 288 (814)
..+.. ...++.+ .++++|++|||+++.||+..+|+||+++.+..++ +.|+++|++. ...
T Consensus 543 rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LVIVGgg~d~~~ 618 (815)
T PLN00142 543 RLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLVVVGGFIDPSK 618 (815)
T ss_pred hHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEEEEECCccccc
Confidence 00000 0011222 2567999999999999999999999987655443 6688888641 111
Q ss_pred --hHHHHHHHHHHHHHHHHhhcccCCCCcccEEEec---CCCCHHHHHHHHH-hccEEEECCCCccCChhHHHHhhhccC
Q 003508 289 --VPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDL 362 (814)
Q Consensus 289 --~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~---g~v~~~el~aly~-~ADv~v~~S~~EG~~Lv~lEama~~~~ 362 (814)
..+..+..+++.+++++.+.. + .|.++. +..+.++++.+|. ++|+||+||.+||||++++|||||+
T Consensus 619 s~d~ee~~el~~L~~La~~lgL~----~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~G-- 690 (815)
T PLN00142 619 SKDREEIAEIKKMHSLIEKYNLK----G--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCG-- 690 (815)
T ss_pred cccHHHHHHHHHHHHHHHHcCCC----C--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcC--
Confidence 111112234566676665422 2 355432 2445678888777 5799999999999999999999994
Q ss_pred CCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhc---CCHHHHHHHHHHHhHHH-HHcCHHHHHHHHHHHH
Q 003508 363 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN---MSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 436 (814)
Q Consensus 363 ~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~---~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 436 (814)
.|+|+|+.+|..+.+ |.+|++|+|.|++++|++|.+++. .+++.+.++.+++++++ +.|+|...++++++-.
T Consensus 691 --lPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 691 --LPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred --CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 899999999999988 779999999999999999987652 35567778888888887 6789999998887644
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.6e-23 Score=235.51 Aligned_cols=277 Identities=18% Similarity=0.215 Sum_probs=197.9
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCc-H---HHHHHH-hhccEEeEecHHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-S---DLLRAV-LAADLVGFHTYDYARHFVSA 182 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~-~---~il~~l-l~~DlIgf~~~~~~~~fl~~ 182 (814)
+.|+||+|+...+.++.++-.+..++|+.+.+|.-+|...-....++. + .+.+.+ ..+|.|...+....+.+..
T Consensus 144 kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~- 222 (465)
T PLN02871 144 KPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALGKELEA- 222 (465)
T ss_pred CCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHH-
Confidence 469999998766655544433344678888888755421100001110 0 111222 3578888877765555432
Q ss_pred HHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh----CCCeEEEEeccccccCCHHHH
Q 003508 183 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQK 258 (814)
Q Consensus 183 ~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~----~~~~vil~VgRld~~KGi~~~ 258 (814)
. +. ....++.++|+|||.+.|.+.... ..+++++ .++++|+++||+.+.||+..+
T Consensus 223 ---~-~~----------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGrl~~~K~~~~l 281 (465)
T PLN02871 223 ---A-GV----------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGRLGAEKNLDFL 281 (465)
T ss_pred ---c-CC----------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCCCchhhhHHHH
Confidence 1 11 013468899999999988754221 1233333 367899999999999999999
Q ss_pred HHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhcc
Q 003508 259 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 338 (814)
Q Consensus 259 l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~AD 338 (814)
++|++++ |+ +.|+++|. ++. ++++++++.. .+|+ |.|.++.+++..+|+.||
T Consensus 282 i~a~~~~----~~----~~l~ivG~-----G~~----~~~l~~~~~~----------~~V~-f~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 282 KRVMERL----PG----ARLAFVGD-----GPY----REELEKMFAG----------TPTV-FTGMLQGDELSQAYASGD 333 (465)
T ss_pred HHHHHhC----CC----cEEEEEeC-----ChH----HHHHHHHhcc----------CCeE-EeccCCHHHHHHHHHHCC
Confidence 9988754 44 45777763 333 3445555432 1365 579999999999999999
Q ss_pred EEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc-----CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 003508 339 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRH 413 (814)
Q Consensus 339 v~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l-----g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~ 413 (814)
+||+||..||||++++|||||| .|+|+|+.+|+.+.+ |.+|++|+|.|++++|++|.+++++ ++.++++.
T Consensus 334 v~V~pS~~E~~g~~vlEAmA~G----~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~ 408 (465)
T PLN02871 334 VFVMPSESETLGFVVLEAMASG----VPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PELRERMG 408 (465)
T ss_pred EEEECCcccccCcHHHHHHHcC----CCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHH
Confidence 9999999999999999999995 899999999988877 4679999999999999999999985 45777888
Q ss_pred HHHhHHHHHcCHHHHHHHHHHH-HHHh
Q 003508 414 WHNFTHVTTHTAQEWAETFVSE-LNDT 439 (814)
Q Consensus 414 ~~~~~~v~~~~~~~W~~~fl~~-l~~~ 439 (814)
+++++++++|+|...+++++.. ...+
T Consensus 409 ~~a~~~~~~fsw~~~a~~l~~~~Y~~~ 435 (465)
T PLN02871 409 AAAREEVEKWDWRAATRKLRNEQYSAA 435 (465)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 8889999999999999998874 4443
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-22 Score=227.61 Aligned_cols=286 Identities=21% Similarity=0.207 Sum_probs=204.7
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhc-----cCCCcHHH-HHHHhhccEEeEecHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR-----TLPSRSDL-LRAVLAADLVGFHTYDYARHFVS 181 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~-----~lp~~~~i-l~~ll~~DlIgf~~~~~~~~fl~ 181 (814)
..|+||+|++...+.+.++++ ..+.|+.+++|..+|...... .......+ ...+..+|.|.+.+....+.+.+
T Consensus 83 ~~divh~~~~~~~~~~~~~~~-~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~ 161 (388)
T TIGR02149 83 DADVVHSHTWYTFLAGHLAKK-LYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILK 161 (388)
T ss_pred CCCeEeecchhhhhHHHHHHH-hcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHH
Confidence 579999999877666555544 457888999998655321100 00011111 12345689888888765555442
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---CCCeEEEEeccccccCCHHHH
Q 003508 182 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 258 (814)
Q Consensus 182 ~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VgRld~~KGi~~~ 258 (814)
. .-+. ...++.++|+|+|++.|.+.. ...+++++ .++++|+++||+.+.||+..+
T Consensus 162 ~---~~~~-----------~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~~~l 219 (388)
T TIGR02149 162 Y---YPDL-----------DPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKGVPHL 219 (388)
T ss_pred H---cCCC-----------CcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccCHHHH
Confidence 1 1011 235688999999998876421 12234444 356799999999999999999
Q ss_pred HHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhcc
Q 003508 259 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 338 (814)
Q Consensus 259 l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~AD 338 (814)
++|++++. ++ +.|+++|++. +. .++.+++++++..++... ..|+++.+.++.+++..+|+.||
T Consensus 220 i~a~~~l~---~~----~~l~i~g~g~--~~---~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~aD 282 (388)
T TIGR02149 220 LDAVHYIP---KD----VQVVLCAGAP--DT---PEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLSNAE 282 (388)
T ss_pred HHHHHHHh---hc----CcEEEEeCCC--Cc---HHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHHhCC
Confidence 99999873 23 3466555322 11 234555666665553221 23777788999999999999999
Q ss_pred EEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCH------HHHHHHHHHHhcCCHHHHH
Q 003508 339 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI------TEVANAIARALNMSPEERE 410 (814)
Q Consensus 339 v~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~------~~lA~ai~~~L~~~~~er~ 410 (814)
+||+||.+||||++++|||+|+ .|+|+|+.+|..+.+ +.+|++++|.|. ++++++|.+++++ ++++.
T Consensus 283 v~v~ps~~e~~g~~~lEA~a~G----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~~ 357 (388)
T TIGR02149 283 VFVCPSIYEPLGIVNLEAMACG----TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELAK 357 (388)
T ss_pred EEEeCCccCCCChHHHHHHHcC----CCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHHH
Confidence 9999999999999999999995 899999999998887 568999999998 9999999999985 45777
Q ss_pred HHHHHHhHHH-HHcCHHHHHHHHHHHHHH
Q 003508 411 KRHWHNFTHV-TTHTAQEWAETFVSELND 438 (814)
Q Consensus 411 ~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 438 (814)
++..++++.+ +.++|..+++++++.+++
T Consensus 358 ~~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 358 KMGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 7777887775 678999999998877664
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-22 Score=226.56 Aligned_cols=278 Identities=14% Similarity=0.163 Sum_probs=195.3
Q ss_pred CCCEEEEeCccchhH-HHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHH-HhhccEEeEecHHHHHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFL-PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 185 (814)
Q Consensus 108 ~~DiI~ihdyhl~ll-p~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~-ll~~DlIgf~~~~~~~~fl~~~~~ 185 (814)
..|+||+|+++.... ...+-.+..+.|++++.|..|+..+.... ....+.+- +..+|.+.+.+....+.+...
T Consensus 88 ~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--- 162 (398)
T cd03796 88 RITIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENTVLR--- 162 (398)
T ss_pred CCCEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHHHHH---
Confidence 469999999765432 23333334468899999987653221110 11122222 346888888887655443221
Q ss_pred HhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHHHHHHH
Q 003508 186 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 265 (814)
Q Consensus 186 ~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~Af~~l 265 (814)
.+ ....++.++|+|+|.+.|.+.... ...++++|+++||+.+.||+..+++|+..+
T Consensus 163 -~~-----------~~~~k~~vi~ngvd~~~f~~~~~~------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 163 -AS-----------LDPERVSVIPNAVDSSDFTPDPSK------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred -hC-----------CChhhEEEEcCccCHHHcCCCccc------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 11 123568889999999888653210 124678999999999999999999999998
Q ss_pred HHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCC
Q 003508 266 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 345 (814)
Q Consensus 266 l~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~ 345 (814)
.++.|++ .|+++|. ++.. +++++++.+.+ ..+ .|+ |.|.++.+++..+|+.||++|+||.
T Consensus 219 ~~~~~~~----~l~i~G~-----g~~~----~~l~~~~~~~~----l~~--~v~-~~G~~~~~~~~~~l~~ad~~v~pS~ 278 (398)
T cd03796 219 CKKHPNV----RFIIGGD-----GPKR----ILLEEMREKYN----LQD--RVE-LLGAVPHERVRDVLVQGHIFLNTSL 278 (398)
T ss_pred HhhCCCE----EEEEEeC-----CchH----HHHHHHHHHhC----CCC--eEE-EeCCCCHHHHHHHHHhCCEEEeCCh
Confidence 8888764 5777764 3332 33455555442 212 355 4689999999999999999999999
Q ss_pred CccCChhHHHHhhhccCCCceEEEeCCCCcccccCCc-eEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHH-HHHc
Q 003508 346 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAG-AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 423 (814)
Q Consensus 346 ~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~-~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~-v~~~ 423 (814)
.||||++++|||||| .|||+|+.+|..+.+.++ +++++| |.++++++|.+++.++. ++..+..+.++. .+.+
T Consensus 279 ~E~~g~~~~EAma~G----~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~l~~~~-~~~~~~~~~~~~~~~~f 352 (398)
T cd03796 279 TEAFCIAIVEAASCG----LLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEAISILR-TGKHDPWSFHNRVKKMY 352 (398)
T ss_pred hhccCHHHHHHHHcC----CCEEECCCCCchhheeCCceeecCC-CHHHHHHHHHHHHhChh-hhhhHHHHHHHHHHhhC
Confidence 999999999999995 899999999998888443 445544 99999999999998754 333444555554 5678
Q ss_pred CHHHHHHHHHHHHHHhH
Q 003508 424 TAQEWAETFVSELNDTV 440 (814)
Q Consensus 424 ~~~~W~~~fl~~l~~~~ 440 (814)
++..-++++++.+++..
T Consensus 353 s~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 353 SWEDVAKRTEKVYDRIL 369 (398)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 88888888888777654
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.1e-22 Score=222.11 Aligned_cols=300 Identities=20% Similarity=0.235 Sum_probs=209.0
Q ss_pred HHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhh--hcc---CCC-cHHH-HHHHhhccE
Q 003508 95 NQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI--HRT---LPS-RSDL-LRAVLAADL 167 (814)
Q Consensus 95 N~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~--~~~---lp~-~~~i-l~~ll~~Dl 167 (814)
...+...+.+.....|+|++|++....++..+.+. .+.++.++.|........ ... .+. +..+ ...+..+|.
T Consensus 88 ~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 166 (398)
T cd03800 88 ADDLLRFLRREGGRPDLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADR 166 (398)
T ss_pred HHHHHHHHHhcCCCccEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCE
Confidence 33344444443336799999988766666666554 468888888875432110 000 000 1111 223557899
Q ss_pred EeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEec
Q 003508 168 VGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVD 247 (814)
Q Consensus 168 Igf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~Vg 247 (814)
|.+.+......+.. ... ....++.++|+|+|.+.|.+.... ......+. ...++++|+++|
T Consensus 167 ii~~s~~~~~~~~~----~~~-----------~~~~~~~vi~ng~~~~~~~~~~~~---~~~~~~~~-~~~~~~~i~~~g 227 (398)
T cd03800 167 VIASTPQEAEELYS----LYG-----------AYPRRIRVVPPGVDLERFTPYGRA---EARRARLL-RDPDKPRILAVG 227 (398)
T ss_pred EEEcCHHHHHHHHH----Hcc-----------ccccccEEECCCCCccceecccch---hhHHHhhc-cCCCCcEEEEEc
Confidence 99888766555442 111 123347889999999887643211 01011111 114678999999
Q ss_pred cccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCH
Q 003508 248 RLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF 327 (814)
Q Consensus 248 Rld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~ 327 (814)
|+++.||+..+++|+..+.+++|+ +.|+++|....... .....+++.++++.+.. ..|. +.|.++.
T Consensus 228 r~~~~k~~~~ll~a~~~l~~~~~~----~~l~i~G~~~~~~~---~~~~~~~~~~~~~~~~~------~~v~-~~g~~~~ 293 (398)
T cd03800 228 RLDPRKGIDTLIRAYAELPELRER----ANLVIVGGPRDDIL---AMDEEELRELARELGVI------DRVD-FPGRVSR 293 (398)
T ss_pred ccccccCHHHHHHHHHHHHHhCCC----eEEEEEECCCCcch---hhhhHHHHHHHHhcCCC------ceEE-EeccCCH
Confidence 999999999999999999887765 45887775432221 12234455666554321 1355 5799999
Q ss_pred HHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCC
Q 003508 328 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMS 405 (814)
Q Consensus 328 ~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~ 405 (814)
+++..+|+.||++|+||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.+++++
T Consensus 294 ~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G----~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~- 368 (398)
T cd03800 294 EDLPALYRAADVFVNPALYEPFGLTALEAMACG----LPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTD- 368 (398)
T ss_pred HHHHHHHHhCCEEEecccccccCcHHHHHHhcC----CCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhC-
Confidence 999999999999999999999999999999995 899999999998888 4579999999999999999999986
Q ss_pred HHHHHHHHHHHhHHH-HHcCHHHHHHHHH
Q 003508 406 PEEREKRHWHNFTHV-TTHTAQEWAETFV 433 (814)
Q Consensus 406 ~~er~~r~~~~~~~v-~~~~~~~W~~~fl 433 (814)
+++++++..++++++ +.++++..+++++
T Consensus 369 ~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 369 PALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 457777788888887 7889998888775
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=234.20 Aligned_cols=282 Identities=19% Similarity=0.162 Sum_probs=197.7
Q ss_pred HHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCch---hhhcc---CCCcH--------HHHH-HHhhcc
Q 003508 102 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHRT---LPSRS--------DLLR-AVLAAD 166 (814)
Q Consensus 102 i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~---e~~~~---lp~~~--------~il~-~ll~~D 166 (814)
+.....+.|+||+|......++..+..+..+.|+.++.|--++.. +++.. .+..+ .+.+ .+..||
T Consensus 167 l~~~~~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad 246 (475)
T cd03813 167 IARPLPKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAAD 246 (475)
T ss_pred hccCCCCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 333445679999998655544444444445789999999765421 22211 00001 1111 123567
Q ss_pred EEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEe
Q 003508 167 LVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGV 246 (814)
Q Consensus 167 lIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~V 246 (814)
.|...+....+... .+| ....++.++|||||.+.|.+.... ....++++|+++
T Consensus 247 ~Ii~~s~~~~~~~~-----~~g-----------~~~~ki~vIpNgid~~~f~~~~~~-----------~~~~~~~~i~~v 299 (475)
T cd03813 247 RITTLYEGNRERQI-----EDG-----------ADPEKIRVIPNGIDPERFAPARRA-----------RPEKEPPVVGLI 299 (475)
T ss_pred EEEecCHHHHHHHH-----HcC-----------CCHHHeEEeCCCcCHHHcCCcccc-----------ccCCCCcEEEEE
Confidence 77665553322111 112 124578899999999988753210 012467899999
Q ss_pred ccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCC
Q 003508 247 DRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD 326 (814)
Q Consensus 247 gRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~ 326 (814)
||+.+.||+..+|+|++.+.++.|+ +.|+++|... +-..+.++++++++++|.. ..|+ |.|
T Consensus 300 Grl~~~Kg~~~li~a~~~l~~~~p~----~~l~IvG~g~-----~~~~~~~e~~~li~~l~l~------~~V~-f~G--- 360 (475)
T cd03813 300 GRVVPIKDIKTFIRAAAIVRKKIPD----AEGWVIGPTD-----EDPEYAEECRELVESLGLE------DNVK-FTG--- 360 (475)
T ss_pred eccccccCHHHHHHHHHHHHHhCCC----eEEEEECCCC-----cChHHHHHHHHHHHHhCCC------CeEE-EcC---
Confidence 9999999999999999999888876 4577776421 1123566777888776532 2366 455
Q ss_pred HHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcccccCC--------ceEEECCCCHHHHHHHH
Q 003508 327 FPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA--------GAILVNPWNITEVANAI 398 (814)
Q Consensus 327 ~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~--------~~~lvnP~d~~~lA~ai 398 (814)
.+++..+|+.||++|+||..||||++++|||||+ .|+|+|+.+|+.+.+.. +|++++|.|++++|++|
T Consensus 361 ~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G----~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai 436 (475)
T cd03813 361 FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG----IPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAI 436 (475)
T ss_pred CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC----CCEEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHH
Confidence 5789999999999999999999999999999995 89999999999888743 79999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHhHHHHH-cCHHHHHHHHHH
Q 003508 399 ARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVS 434 (814)
Q Consensus 399 ~~~L~~~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~ 434 (814)
.+++++ ++.+.++.+++++++++ +++...+++|.+
T Consensus 437 ~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 437 LRLLKD-PELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred HHHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999986 45777888888888766 466766666654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.3e-22 Score=223.62 Aligned_cols=232 Identities=16% Similarity=0.182 Sum_probs=173.4
Q ss_pred hccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh--CCCe
Q 003508 164 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRK 241 (814)
Q Consensus 164 ~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~ 241 (814)
.+|.+...+....+.+.. .++. ...++.++|+|||.+.|.+.... .....++.+ .++.
T Consensus 136 ~~~~~i~vs~~~~~~~~~----~~~~-----------~~~~~~vi~ngvd~~~~~~~~~~-----~~~~~~~~~~~~~~~ 195 (374)
T TIGR03088 136 LIHHYVAVSRDLEDWLRG----PVKV-----------PPAKIHQIYNGVDTERFHPSRGD-----RSPILPPDFFADESV 195 (374)
T ss_pred cCCeEEEeCHHHHHHHHH----hcCC-----------ChhhEEEeccCccccccCCCccc-----hhhhhHhhcCCCCCe
Confidence 367777777765554432 1221 23567889999999888643211 111112222 3577
Q ss_pred EEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEe
Q 003508 242 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 321 (814)
Q Consensus 242 vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~ 321 (814)
+|+++||+.+.||+..+++|++.++++.|+...++.|+++|. ++. ++++++++.+.+. ...++|
T Consensus 196 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~----~~~~~~~~~~~~~-------~~~v~~ 259 (374)
T TIGR03088 196 VVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPA----RGACEQMVRAAGL-------AHLVWL 259 (374)
T ss_pred EEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecC-----Cch----HHHHHHHHHHcCC-------cceEEE
Confidence 999999999999999999999999998886555688888874 222 2344555554432 234446
Q ss_pred cCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHH
Q 003508 322 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIA 399 (814)
Q Consensus 322 ~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~ 399 (814)
.|. .+++..+|+.||++|+||..||||++++|||+|+ .|+|+|+.+|..+.+ |.+|++++|.|++++|++|.
T Consensus 260 ~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G----~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~ 333 (374)
T TIGR03088 260 PGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMASG----LPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQ 333 (374)
T ss_pred cCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHcC----CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHH
Confidence 664 5789999999999999999999999999999995 899999999999888 56899999999999999999
Q ss_pred HHhcCCHHHHHHHHHHHhHHH-HHcCHHHHHHHHHHHHHH
Q 003508 400 RALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELND 438 (814)
Q Consensus 400 ~~L~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 438 (814)
+++++ ++++..+..++++++ +.|++...++++++..++
T Consensus 334 ~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 334 PYVSD-PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99985 456777778888886 688999888888766553
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.7e-22 Score=224.36 Aligned_cols=273 Identities=18% Similarity=0.178 Sum_probs=185.2
Q ss_pred CCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccC-------------CCcH--HH-----------HH--
Q 003508 109 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-------------PSRS--DL-----------LR-- 160 (814)
Q Consensus 109 ~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~l-------------p~~~--~i-----------l~-- 160 (814)
+|+|..|--+...+ .+.+..+++|+++.+|.|.-+++.+..+ ..+. .+ +.
T Consensus 108 pDv~i~~~g~~~~~--~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~ 185 (419)
T cd03806 108 PDIFIDTMGYPFTY--PLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGL 185 (419)
T ss_pred CCEEEEcCCcccHH--HHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHH
Confidence 58665553223222 3444556889999999554344544221 1111 01 11
Q ss_pred HHhhccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCC
Q 003508 161 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 240 (814)
Q Consensus 161 ~ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~ 240 (814)
.+..+|.|...+.....++.+ ..+ ...++.++++|+|++.|.+... ....++
T Consensus 186 ~~~~aD~ii~~S~~~~~~~~~----~~~------------~~~~~~vi~~gvd~~~~~~~~~------------~~~~~~ 237 (419)
T cd03806 186 AGSFADVVMVNSTWTRNHIRS----LWK------------RNTKPSIVYPPCDVEELLKLPL------------DEKTRE 237 (419)
T ss_pred HhhcCCEEEECCHHHHHHHHH----HhC------------cCCCcEEEcCCCCHHHhccccc------------ccccCC
Confidence 133578777766543333321 111 1136788999999988764311 012356
Q ss_pred eEEEEeccccccCCHHHHHHHHHHHHHhCcccc-CceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003508 241 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 319 (814)
Q Consensus 241 ~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~-~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~ 319 (814)
++|++|||+.+.||+..+|+||..+.+..|+.. .++.|+++|..... +..++.+++++++.+++.. ..|+
T Consensus 238 ~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~---~~~~~~~~L~~~~~~l~l~------~~V~ 308 (419)
T cd03806 238 NQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE---DDEKRVEDLKLLAKELGLE------DKVE 308 (419)
T ss_pred cEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc---ccHHHHHHHHHHHHHhCCC------CeEE
Confidence 799999999999999999999999998877521 24778888753211 1123466777777776432 1365
Q ss_pred EecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccc-cc-----CCceEEECCCCHHH
Q 003508 320 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ-SL-----GAGAILVNPWNITE 393 (814)
Q Consensus 320 ~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e-~l-----g~~~~lvnP~d~~~ 393 (814)
|.|.++.+++..+|+.||++|.||..||||++++|||||+ .|+|+|+.+|..+ .+ |.+|++++ |+++
T Consensus 309 -f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G----~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~ 381 (419)
T cd03806 309 -FVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG----LIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEE 381 (419)
T ss_pred -EecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC----CcEEEEcCCCCchheeeccCCCCceEEeC--CHHH
Confidence 5689999999999999999999999999999999999994 7899999888654 44 45899974 9999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHhHHHHHcCHHH
Q 003508 394 VANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 427 (814)
Q Consensus 394 lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~~~~ 427 (814)
+|++|.++++++++++..+.++.++..++|++..
T Consensus 382 la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 415 (419)
T cd03806 382 YAEAIEKILSLSEEERLRIRRAARSSVKRFSDEE 415 (419)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHH
Confidence 9999999999987666665444555556666554
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-21 Score=223.35 Aligned_cols=208 Identities=16% Similarity=0.157 Sum_probs=161.1
Q ss_pred EEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEec
Q 003508 204 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 283 (814)
Q Consensus 204 ~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~ 283 (814)
++.++++|+|.+.|..... +...+++++++|||+.+.||+..+|+||++++++.++-..++.|+++|.
T Consensus 244 ~i~vvyp~vd~~~~~~~~~------------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~ 311 (463)
T PLN02949 244 RIKRVYPPCDTSGLQALPL------------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGS 311 (463)
T ss_pred CeEEEcCCCCHHHcccCCc------------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeC
Confidence 5678899999876632110 0013457899999999999999999999998875443222467888885
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCC
Q 003508 284 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 363 (814)
Q Consensus 284 p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~ 363 (814)
.. .++..++.+++++++++.+.. + .|+ |.|.++.+++..+|+.||++|.||.+||||++++|||||+
T Consensus 312 ~~---~~~~~~~~~eL~~la~~l~L~----~--~V~-f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G--- 378 (463)
T PLN02949 312 CR---NKEDEERLQKLKDRAKELGLD----G--DVE-FHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAG--- 378 (463)
T ss_pred CC---CcccHHHHHHHHHHHHHcCCC----C--cEE-EeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcC---
Confidence 42 112223456677777765422 2 366 4689999999999999999999999999999999999994
Q ss_pred CceEEEeCCCCcc-ccc-----CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHH
Q 003508 364 KGVLILSEFAGAA-QSL-----GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 437 (814)
Q Consensus 364 ~g~vVlS~~~G~~-e~l-----g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 437 (814)
.|+|+|+.+|.. +.+ |.+|++++ |++++|++|.++++++++++.++.+++++.+++|++..-.+++++.+.
T Consensus 379 -~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~ 455 (463)
T PLN02949 379 -AVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIR 455 (463)
T ss_pred -CcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 799999998875 333 35688874 999999999999998888888888999999999999998888887776
Q ss_pred Hh
Q 003508 438 DT 439 (814)
Q Consensus 438 ~~ 439 (814)
..
T Consensus 456 ~l 457 (463)
T PLN02949 456 PI 457 (463)
T ss_pred HH
Confidence 54
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-21 Score=221.61 Aligned_cols=284 Identities=11% Similarity=0.038 Sum_probs=189.3
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeE-EEEEecCCCchhhhccCCCcHHHH----HHHhhccEEeEecHHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKV-GWFLHTPFPSSEIHRTLPSRSDLL----RAVLAADLVGFHTYDYARHFVSA 182 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i-~~f~H~Pfp~~e~~~~lp~~~~il----~~ll~~DlIgf~~~~~~~~fl~~ 182 (814)
..|+||.|++...+++.+..... ..|+ ....|. ++... ++.++ ..+..++.+.-.+. ++.+....
T Consensus 280 rpDIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~-------~~r~~~~e~~~~~~a~~i~~~sd-~v~~s~~v 349 (578)
T PRK15490 280 KLDYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVV-------RKRLFKPEYEPLYQALAVVPGVD-FMSNNHCV 349 (578)
T ss_pred CCCEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcc-------hhhHHHHHHHHhhhhceeEecch-hhhccHHH
Confidence 45999999999877766665544 4554 444565 32211 11111 12333455443332 33222221
Q ss_pred HHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh-CCCeEEEEeccccccCCHHHHHHH
Q 003508 183 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKLLA 261 (814)
Q Consensus 183 ~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VgRld~~KGi~~~l~A 261 (814)
...+... +..+..+|.+||||||++.|.+....+ ......++..+ .+.++|++|+|+.+.||...+|+|
T Consensus 350 ~~~l~~~--------lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg~~~LI~A 419 (578)
T PRK15490 350 TRHYADW--------LKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKNPFAWIDF 419 (578)
T ss_pred HHHHHHH--------hCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcCHHHHHHH
Confidence 1111000 112356789999999999887642111 01112222223 345688899999999999999999
Q ss_pred HHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEE
Q 003508 262 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 341 (814)
Q Consensus 262 f~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v 341 (814)
+.+++++.|++ .|+++|. ++. ++++++++.+.+.. ..|+ |.|+ .+++..+|+.||+||
T Consensus 420 ~a~llk~~pdi----rLvIVGd-----G~~----~eeLk~la~elgL~------d~V~-FlG~--~~Dv~~~LaaADVfV 477 (578)
T PRK15490 420 AARYLQHHPAT----RFVLVGD-----GDL----RAEAQKRAEQLGIL------ERIL-FVGA--SRDVGYWLQKMNVFI 477 (578)
T ss_pred HHHHHhHCCCe----EEEEEeC-----chh----HHHHHHHHHHcCCC------CcEE-ECCC--hhhHHHHHHhCCEEE
Confidence 99999888864 5777763 332 44566666655421 2366 4566 468999999999999
Q ss_pred ECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHH---hcCCHHHHHHHHHHH
Q 003508 342 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARA---LNMSPEEREKRHWHN 416 (814)
Q Consensus 342 ~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~---L~~~~~er~~r~~~~ 416 (814)
+||.+||||++++|||||+ .|+|+|+.+|..+.+ |.+|++|+|.|++++++++..+ +.+. +.+..+.+++
T Consensus 478 lPS~~EGfp~vlLEAMA~G----lPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~ll-~~~~~mg~~A 552 (578)
T PRK15490 478 LFSRYEGLPNVLIEAQMVG----VPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYAEKLVNLW-RSRTGICQQT 552 (578)
T ss_pred EcccccCccHHHHHHHHhC----CCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 9999999999999999995 899999999999887 7899999999999998887433 3322 2444566778
Q ss_pred hHHH-HHcCHHHHHHHHHHHHHH
Q 003508 417 FTHV-TTHTAQEWAETFVSELND 438 (814)
Q Consensus 417 ~~~v-~~~~~~~W~~~fl~~l~~ 438 (814)
++++ +.|++..-++++++.++.
T Consensus 553 Re~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 553 QSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHhhCCHHHHHHHHHHHHHh
Confidence 8876 568999888888877654
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-21 Score=217.13 Aligned_cols=275 Identities=17% Similarity=0.141 Sum_probs=194.6
Q ss_pred HHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCc--hhhhccCCC--cHHHHHH-HhhccEEeEecHHHH
Q 003508 102 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPS--SEIHRTLPS--RSDLLRA-VLAADLVGFHTYDYA 176 (814)
Q Consensus 102 i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~--~e~~~~lp~--~~~il~~-ll~~DlIgf~~~~~~ 176 (814)
+++..+ .|+||+|+.........+.+ ..++|+.+.+|..... .......++ ...+.+. +..+|.|.+.+....
T Consensus 77 ~~~~~~-~dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 154 (367)
T cd05844 77 LLRRHR-PDLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFIR 154 (367)
T ss_pred HHHhhC-CCEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHHH
Confidence 444444 59999997654443333333 2367888888853211 111110011 1122222 346799988886544
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHH
Q 003508 177 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 256 (814)
Q Consensus 177 ~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~ 256 (814)
+.+.. .+. ...++.++|+|+|.+.|.+... ..++++|+++||+.+.||++
T Consensus 155 ~~~~~-----~~~-----------~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~~K~~~ 204 (367)
T cd05844 155 DRLLA-----LGF-----------PPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVEKKGPL 204 (367)
T ss_pred HHHHH-----cCC-----------CHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeeccccChH
Confidence 44432 121 2346788999999987764311 12467899999999999999
Q ss_pred HHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 003508 257 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 336 (814)
Q Consensus 257 ~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ 336 (814)
.+++|+..+.+++|+ +.|+++|. ++. .++++.++++.+.. ..|+ +.|.++.+++..+|+.
T Consensus 205 ~li~a~~~l~~~~~~----~~l~ivG~-----g~~----~~~~~~~~~~~~~~------~~v~-~~g~~~~~~l~~~~~~ 264 (367)
T cd05844 205 LLLEAFARLARRVPE----VRLVIIGD-----GPL----LAALEALARALGLG------GRVT-FLGAQPHAEVRELMRR 264 (367)
T ss_pred HHHHHHHHHHHhCCC----eEEEEEeC-----chH----HHHHHHHHHHcCCC------CeEE-ECCCCCHHHHHHHHHh
Confidence 999999999888776 45777763 232 34556666554211 1355 6789999999999999
Q ss_pred ccEEEECCC------CccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHH
Q 003508 337 TDVALVTSL------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 408 (814)
Q Consensus 337 ADv~v~~S~------~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~e 408 (814)
||++|+||. .||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ +.
T Consensus 265 ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G----~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~ 339 (367)
T cd05844 265 ARIFLQPSVTAPSGDAEGLPVVLLEAQASG----VPVVATRHGGIPEAVEDGETGLLVPEGDVAALAAALGRLLADP-DL 339 (367)
T ss_pred CCEEEECcccCCCCCccCCchHHHHHHHcC----CCEEEeCCCCchhheecCCeeEEECCCCHHHHHHHHHHHHcCH-HH
Confidence 999999997 599999999999995 899999999998887 56899999999999999999999854 56
Q ss_pred HHHHHHHHhHHH-HHcCHHHHHHHHH
Q 003508 409 REKRHWHNFTHV-TTHTAQEWAETFV 433 (814)
Q Consensus 409 r~~r~~~~~~~v-~~~~~~~W~~~fl 433 (814)
+.++..++++++ +.+++..+++++.
T Consensus 340 ~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 340 RARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 777778888877 5788888887764
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.9e-23 Score=211.11 Aligned_cols=194 Identities=22% Similarity=0.358 Sum_probs=145.7
Q ss_pred EEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCceEEccCcEEE
Q 003508 470 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFL 549 (814)
Q Consensus 470 li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l~lia~hG~~i 549 (814)
||++||||||++. ....++++++++|++|+++ +..|+|+|||+...+.++++.++.+++++||+++
T Consensus 1 li~~D~DgTL~~~-------------~~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i 66 (204)
T TIGR01484 1 LLFFDLDGTLLDP-------------NAHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQLPLPLIAENGALI 66 (204)
T ss_pred CEEEeCcCCCcCC-------------CCCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEE
Confidence 5899999999985 2246899999999999985 6999999999999999999887888999999999
Q ss_pred EeCCCc-eeecccccCChHHH---HHHHHHHHHHhccCCCceeeeccceEEEEeccCChhhhHHHHHHHHHHHhcCCCC-
Q 003508 550 RCTTGK-WMTTMPEHLNMEWV---DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS- 624 (814)
Q Consensus 550 ~~~~~~-~~~~~~~~~~~~~~---~~v~~i~~~~~~~~~g~~iE~K~~~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~- 624 (814)
+..++. |.. . ......+. +.+..++..+....++..+|.+...+++||+... .......++...+ +....
T Consensus 67 ~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~ 141 (204)
T TIGR01484 67 FYPGEILYIE-P-SDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAE--LGQELDSKMRERL-EKIGRN 141 (204)
T ss_pred EECCEEEEEc-c-cccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccc--hhhHHHHHHHHHH-Hhhccc
Confidence 864432 332 1 11111111 2334445555566788888999999999998641 1111223444444 33222
Q ss_pred CCceEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 625 NASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 625 ~~~~~v~-~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
...+.+. .+..++||+|++++||.+++.++++++ .+.+++++||| +.||++||+.++.
T Consensus 142 ~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~------~~~~~~~~~GD-~~nD~~~~~~~~~ 200 (204)
T TIGR01484 142 DLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN------GKRDEILAFGD-SGNDEEMFEVAGL 200 (204)
T ss_pred cCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CHHHHHHHHHcCC
Confidence 2457777 699999999999999999999999987 46789999999 9999999999864
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-21 Score=219.01 Aligned_cols=283 Identities=17% Similarity=0.163 Sum_probs=190.3
Q ss_pred CCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHH---------HHhhccEEeEecHHHHH
Q 003508 107 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR---------AVLAADLVGFHTYDYAR 177 (814)
Q Consensus 107 ~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~---------~ll~~DlIgf~~~~~~~ 177 (814)
...|+|++|+..... + +++... ..++.++.|.| ...........+.+.+ .+..+|.|...+.....
T Consensus 93 ~~~Dvi~~~~~~~~~-~-~~~~~~-~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~ 167 (392)
T cd03805 93 EKYDVFIVDQVSACV-P-LLKLFS-PSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTAS 167 (392)
T ss_pred CCCCEEEEcCcchHH-H-HHHHhc-CCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHH
Confidence 467999998765432 2 233333 37899999954 2211110011111111 13347888776654333
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHH
Q 003508 178 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 257 (814)
Q Consensus 178 ~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~ 257 (814)
.+.. .++.. ....+.++|+|||.+.|.+..... .........+..+|+++||+.+.||++.
T Consensus 168 ~~~~----~~~~~----------~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~~~ 228 (392)
T cd03805 168 VFKK----TFPSL----------AKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNIAL 228 (392)
T ss_pred HHHH----Hhccc----------ccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCChHH
Confidence 3322 11110 112235889999998886532211 0000112256788999999999999999
Q ss_pred HHHHHHHHHHhC---ccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHH-hhcccCCCCcccEEEecCCCCHHHHHHH
Q 003508 258 KLLAFEKFLEEN---SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGR-INGRFGTLTAVPIHHLDRSLDFPALCAL 333 (814)
Q Consensus 258 ~l~Af~~ll~~~---p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~-iN~~~g~~~~~~V~~~~g~v~~~el~al 333 (814)
+|+|++++.++. |+ +.|+++|.+... ......+.+++++++++ .+.. ..|+ |.|+++.+++..+
T Consensus 229 ll~a~~~l~~~~~~~~~----~~l~i~G~~~~~-~~~~~~~~~~l~~~~~~~~~l~------~~V~-f~g~~~~~~~~~~ 296 (392)
T cd03805 229 AIEAFAILKDKLAEFKN----VRLVIAGGYDPR-VAENVEYLEELQRLAEELLLLE------DQVI-FLPSISDSQKELL 296 (392)
T ss_pred HHHHHHHHHhhcccccC----eEEEEEcCCCCC-CchhHHHHHHHHHHHHHhcCCC------ceEE-EeCCCChHHHHHH
Confidence 999999998776 54 568877754321 12223445666777665 3221 2366 5789999999999
Q ss_pred HHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHH
Q 003508 334 YAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREK 411 (814)
Q Consensus 334 y~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~ 411 (814)
|+.||++++||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++| |++++|++|.++++++ +++.+
T Consensus 297 l~~ad~~l~~s~~E~~g~~~lEAma~G----~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~-~~~~~ 370 (392)
T cd03805 297 LSSARALLYTPSNEHFGIVPLEAMYAG----KPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDP-DLADR 370 (392)
T ss_pred HhhCeEEEECCCcCCCCchHHHHHHcC----CCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhCh-HHHHH
Confidence 999999999999999999999999994 899999999988887 457899987 9999999999999876 46777
Q ss_pred HHHHHhHHH-HHcCHHHHHHH
Q 003508 412 RHWHNFTHV-TTHTAQEWAET 431 (814)
Q Consensus 412 r~~~~~~~v-~~~~~~~W~~~ 431 (814)
+.+++++++ ..+++...+++
T Consensus 371 ~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 371 MGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHHHhcCHHHHhhh
Confidence 778888876 55777766654
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.5e-21 Score=210.98 Aligned_cols=280 Identities=20% Similarity=0.264 Sum_probs=196.9
Q ss_pred HHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHH-hhccEEeEecHHHHHHHHH
Q 003508 103 NKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV-LAADLVGFHTYDYARHFVS 181 (814)
Q Consensus 103 ~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~l-l~~DlIgf~~~~~~~~fl~ 181 (814)
++.. .+|+||+|.+|..++..+++...+..++....|...+... + +..+.+.. ..++.+...+....+.+..
T Consensus 75 ~~~~-~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~-~-----~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 147 (360)
T cd04951 75 LRQF-KPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGR-L-----RMLAYRLTDFLSDLTTNVSKEALDYFIA 147 (360)
T ss_pred HHhc-CCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhH-H-----HHHHHHHHhhccCceEEEcHHHHHHHHh
Confidence 3334 4599999999988888888776667788888886432110 0 11111111 1234444445544444432
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---CCCeEEEEeccccccCCHHHH
Q 003508 182 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 258 (814)
Q Consensus 182 ~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VgRld~~KGi~~~ 258 (814)
. .+ -...++.++|+|+|...|.+.. .....+++++ .++++++++||+.+.||+..+
T Consensus 148 ~----~~-----------~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~l 206 (360)
T cd04951 148 S----KA-----------FNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNL 206 (360)
T ss_pred c----cC-----------CCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHH
Confidence 1 00 1234688899999988776431 1223455554 367899999999999999999
Q ss_pred HHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhcc
Q 003508 259 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 338 (814)
Q Consensus 259 l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~AD 338 (814)
++|+.++.+++|+ +.|+++|. ++.. +++++.+.+.|.. ..|. +.|.. +++..+|+.||
T Consensus 207 i~a~~~l~~~~~~----~~l~i~G~-----g~~~----~~~~~~~~~~~~~------~~v~-~~g~~--~~~~~~~~~ad 264 (360)
T cd04951 207 LKAFAKLLSDYLD----IKLLIAGD-----GPLR----ATLERLIKALGLS------NRVK-LLGLR--DDIAAYYNAAD 264 (360)
T ss_pred HHHHHHHHhhCCC----eEEEEEcC-----CCcH----HHHHHHHHhcCCC------CcEE-Eeccc--ccHHHHHHhhc
Confidence 9999999888876 45777763 2222 3344444444321 1355 45654 57899999999
Q ss_pred EEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhH
Q 003508 339 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 418 (814)
Q Consensus 339 v~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~ 418 (814)
++++||..||||++++|||+|| .|+|+|+.+|..+.+.++|++++|.|+++++++|.++++++++.+..+..+...
T Consensus 265 ~~v~~s~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~ 340 (360)
T cd04951 265 LFVLSSAWEGFGLVVAEAMACE----LPVVATDAGGVREVVGDSGLIVPISDPEALANKIDEILKMSGEERDIIGARRER 340 (360)
T ss_pred eEEecccccCCChHHHHHHHcC----CCEEEecCCChhhEecCCceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999999999995 899999999998888678999999999999999999997777666666655333
Q ss_pred HHHHcCHHHHHHHHHHHH
Q 003508 419 HVTTHTAQEWAETFVSEL 436 (814)
Q Consensus 419 ~v~~~~~~~W~~~fl~~l 436 (814)
..+.+++..+++++++.+
T Consensus 341 ~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 341 IVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHhcCHHHHHHHHHHHh
Confidence 467899999999887654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-20 Score=213.99 Aligned_cols=285 Identities=14% Similarity=0.125 Sum_probs=198.6
Q ss_pred CCCCEEEEeCccchh--HHHHHHhhCCCCeEEEEEecCCCchhhh-ccCCC--cHH----HHHH-HhhccEEeEecHHHH
Q 003508 107 KDGDVVWCHDYHLMF--LPKCLKEYNSDMKVGWFLHTPFPSSEIH-RTLPS--RSD----LLRA-VLAADLVGFHTYDYA 176 (814)
Q Consensus 107 ~~~DiI~ihdyhl~l--lp~~lr~~~~~~~i~~f~H~Pfp~~e~~-~~lp~--~~~----il~~-ll~~DlIgf~~~~~~ 176 (814)
.+.|+||+|...++. ....+++ ..+.++.+..|--||..-.- ...+. ... +.+. +..+|.|...+....
T Consensus 105 ~~~Div~~~~p~~~~~~~~~~~~~-~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~ 183 (412)
T PRK10307 105 WRPDRVIGVVPTLFCAPGARLLAR-LSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMM 183 (412)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHH-hhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHH
Confidence 357999999866542 2233443 34567777777545422110 01110 011 1122 335899988887666
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---CCCeEEEEeccccccC
Q 003508 177 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIK 253 (814)
Q Consensus 177 ~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VgRld~~K 253 (814)
+.+.. .+. ...++.++|||||.+.|.+... .....+++++ .++++|+++||+.+.|
T Consensus 184 ~~~~~-----~~~-----------~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 184 NKARE-----KGV-----------AAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred HHHHH-----cCC-----------CcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 55432 121 2457889999999988865321 1122355555 3567999999999999
Q ss_pred CHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHH
Q 003508 254 GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCAL 333 (814)
Q Consensus 254 Gi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~al 333 (814)
|+..+++|++++ +++|+ +.|+++|. ++. ++++++++.+.+. ..|+ |.|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG~-----g~~----~~~l~~~~~~~~l-------~~v~-f~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICGQ-----GGG----KARLEKMAQCRGL-------PNVH-FLPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEECC-----Chh----HHHHHHHHHHcCC-------CceE-EeCCCCHHHHHHH
Confidence 999999999876 44554 56887763 333 3445556555432 2366 5689999999999
Q ss_pred HHhccEEEECCCCccCC----hhHHHHhhhccCCCceEEEeCCCCc--ccccCCceEEECCCCHHHHHHHHHHHhcCCHH
Q 003508 334 YAVTDVALVTSLRDGMN----LVSYEFVACQDLKKGVLILSEFAGA--AQSLGAGAILVNPWNITEVANAIARALNMSPE 407 (814)
Q Consensus 334 y~~ADv~v~~S~~EG~~----Lv~lEama~~~~~~g~vVlS~~~G~--~e~lg~~~~lvnP~d~~~lA~ai~~~L~~~~~ 407 (814)
|+.||++|+||..|+++ ...+|||||+ .|+|+|..+|. .+.+..+|++++|.|++++|++|.++++++ +
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~G----~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~~la~~i~~l~~~~-~ 375 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLASG----RNVVATAEPGTELGQLVEGIGVCVEPESVEALVAAIAALARQA-L 375 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHcC----CCEEEEeCCCchHHHHHhCCcEEeCCCCHHHHHHHHHHHHhCH-H
Confidence 99999999999999954 4479999994 89999988774 355556899999999999999999999764 5
Q ss_pred HHHHHHHHHhHHHH-HcCHHHHHHHHHHHHHHhH
Q 003508 408 EREKRHWHNFTHVT-THTAQEWAETFVSELNDTV 440 (814)
Q Consensus 408 er~~r~~~~~~~v~-~~~~~~W~~~fl~~l~~~~ 440 (814)
++..+.++++++++ .+++...+++|++.+++..
T Consensus 376 ~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 376 LRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 77888888888875 6899999999988887653
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-20 Score=209.32 Aligned_cols=277 Identities=16% Similarity=0.171 Sum_probs=193.1
Q ss_pred CCCEEEEeCccchhHHHHHHhhC---CCCeEEEEEecCCCchhhhccCCCcHH-HHHHHhhccEEeEecHHHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYN---SDMKVGWFLHTPFPSSEIHRTLPSRSD-LLRAVLAADLVGFHTYDYARHFVSAC 183 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~---~~~~i~~f~H~Pfp~~e~~~~lp~~~~-il~~ll~~DlIgf~~~~~~~~fl~~~ 183 (814)
..|+||+|.+....++.++..+. .+.++.+++|..-.. ....-+.... +...+..+|.|...+....+.+..
T Consensus 84 ~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~-- 159 (371)
T cd04962 84 KLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTAVSESLRQETYE-- 159 (371)
T ss_pred CccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEEcCHHHHHHHHH--
Confidence 46999999876544455544322 257888888853110 1111122222 233456789999988866555432
Q ss_pred HHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---CCCeEEEEeccccccCCHHHHHH
Q 003508 184 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLL 260 (814)
Q Consensus 184 ~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VgRld~~KGi~~~l~ 260 (814)
..+ ...++.++|+|+|...|.+... ...++++ .++++++++||+.+.||+..+++
T Consensus 160 --~~~------------~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~il~~g~l~~~K~~~~li~ 217 (371)
T cd04962 160 --LFD------------ITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVLIHISNFRPVKRIDDVIR 217 (371)
T ss_pred --hcC------------CcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEEEEecccccccCHHHHHH
Confidence 111 1246788999999887754211 1223333 36788999999999999999999
Q ss_pred HHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEE
Q 003508 261 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 340 (814)
Q Consensus 261 Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~ 340 (814)
|++++.++ ++ +.|+++|.+ +.. +++++++.+.+. . ..|++ .|.. +++..+|+.||++
T Consensus 218 a~~~l~~~-~~----~~l~i~G~g-----~~~----~~~~~~~~~~~~----~--~~v~~-~g~~--~~~~~~~~~~d~~ 274 (371)
T cd04962 218 IFAKVRKE-VP----ARLLLVGDG-----PER----SPAERLARELGL----Q--DDVLF-LGKQ--DHVEELLSIADLF 274 (371)
T ss_pred HHHHHHhc-CC----ceEEEEcCC-----cCH----HHHHHHHHHcCC----C--ceEEE-ecCc--ccHHHHHHhcCEE
Confidence 99988654 22 457766642 222 233444444331 1 13554 5654 5799999999999
Q ss_pred EECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhH
Q 003508 341 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 418 (814)
Q Consensus 341 v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~ 418 (814)
|+||..||||++++|||+|+ .|+|+|+.+|..+.+ |.+|++++|.|+++++++|.++++++ +++.++..++++
T Consensus 275 v~ps~~E~~~~~~~EAma~g----~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 349 (371)
T cd04962 275 LLPSEKESFGLAALEAMACG----VPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDD-ELWQEFSRAARN 349 (371)
T ss_pred EeCCCcCCCccHHHHHHHcC----CCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHH
Confidence 99999999999999999995 899999999998888 56899999999999999999999854 566777777887
Q ss_pred H-HHHcCHHHHHHHHHHHHHH
Q 003508 419 H-VTTHTAQEWAETFVSELND 438 (814)
Q Consensus 419 ~-v~~~~~~~W~~~fl~~l~~ 438 (814)
. .+.+++...++++++.+++
T Consensus 350 ~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 350 RAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHh
Confidence 7 5678988888888766543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.2e-21 Score=227.11 Aligned_cols=279 Identities=15% Similarity=0.104 Sum_probs=184.6
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEE-EEecCCCc---hhhhccCCCcHHHHHHHhhccEEeEe--cHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGW-FLHTPFPS---SEIHRTLPSRSDLLRAVLAADLVGFH--TYDYARHFVS 181 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~-f~H~Pfp~---~e~~~~lp~~~~il~~ll~~DlIgf~--~~~~~~~fl~ 181 (814)
..||||+|.+.-..+..+..+.. .+|+.+ .+|+ +|. .+.++. ....+...+..++.+.+. +....+.+..
T Consensus 400 kpDIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~ 475 (694)
T PRK15179 400 VPSVVHIWQDGSIFACALAALLA-GVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAAHRYAD 475 (694)
T ss_pred CCcEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH
Confidence 46999999988877777766543 455544 4564 221 111110 011122333334433333 2222222221
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhC-CCeEEEEeccccccCCHHHHHH
Q 003508 182 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMIKGIPQKLL 260 (814)
Q Consensus 182 ~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~VgRld~~KGi~~~l~ 260 (814)
.++. +..+|.++|||||++.|.+. +........++.... +.++|++|||+++.||+..+|+
T Consensus 476 ----~~g~-----------~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~ 537 (694)
T PRK15179 476 ----WLGV-----------DERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDDNKRPFLWVE 537 (694)
T ss_pred ----HcCC-----------ChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCccCCHHHHHH
Confidence 1222 34578899999999888532 111111122222222 4668899999999999999999
Q ss_pred HHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEE
Q 003508 261 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 340 (814)
Q Consensus 261 Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~ 340 (814)
||.++++++|++ .|+++|. ++ +++++++++.+.+.. ..|+ |.|.. +++..+|+.||+|
T Consensus 538 A~a~l~~~~p~~----~LvIvG~-----G~----~~~~L~~l~~~lgL~------~~V~-flG~~--~dv~~ll~aaDv~ 595 (694)
T PRK15179 538 AAQRFAASHPKV----RFIMVGG-----GP----LLESVREFAQRLGMG------ERIL-FTGLS--RRVGYWLTQFNAF 595 (694)
T ss_pred HHHHHHHHCcCe----EEEEEcc-----Cc----chHHHHHHHHHcCCC------CcEE-EcCCc--chHHHHHHhcCEE
Confidence 999999988874 5877774 22 234566676665422 1355 57775 4799999999999
Q ss_pred EECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCH--HHHHHHHHHHhcCCHHHHHHHHHHH
Q 003508 341 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI--TEVANAIARALNMSPEEREKRHWHN 416 (814)
Q Consensus 341 v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~--~~lA~ai~~~L~~~~~er~~r~~~~ 416 (814)
|+||.+||||++++|||||+ .|+|+|+.+|..+.+ |.+|++|+|.|. ++++++|.+++.... ....+.+++
T Consensus 596 VlpS~~Egfp~vlLEAMA~G----~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~-~~~~l~~~a 670 (694)
T PRK15179 596 LLLSRFEGLPNVLIEAQFSG----VPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCA-ADPGIARKA 670 (694)
T ss_pred EeccccccchHHHHHHHHcC----CeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChh-ccHHHHHHH
Confidence 99999999999999999994 899999999998888 568999998875 689999998887543 233445567
Q ss_pred hHHH-HHcCHHHHHHHHHHH
Q 003508 417 FTHV-TTHTAQEWAETFVSE 435 (814)
Q Consensus 417 ~~~v-~~~~~~~W~~~fl~~ 435 (814)
++++ +.|++..-++++++.
T Consensus 671 r~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 671 ADWASARFSLNQMIASTVRC 690 (694)
T ss_pred HHHHHHhCCHHHHHHHHHHH
Confidence 7766 578888777777653
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-20 Score=218.56 Aligned_cols=274 Identities=16% Similarity=0.099 Sum_probs=187.2
Q ss_pred CCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCch-hhhccCC-C---cHHHHHHHhhccEEeEecHHHHHHHH
Q 003508 106 YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS-EIHRTLP-S---RSDLLRAVLAADLVGFHTYDYARHFV 180 (814)
Q Consensus 106 ~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~-e~~~~lp-~---~~~il~~ll~~DlIgf~~~~~~~~fl 180 (814)
..++||++++-..... +.++ +..+.+++..++|.-.-.. ..-...+ + -+..++.+-.+|.|...|....+...
T Consensus 209 ~~~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~ 286 (500)
T TIGR02918 209 LTKKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILK 286 (500)
T ss_pred CCCCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHH
Confidence 4567998776544433 3344 4566899999999642110 0000000 1 11223444456888877765443333
Q ss_pred HHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHH
Q 003508 181 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLL 260 (814)
Q Consensus 181 ~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~ 260 (814)
..... +.+...+|.++|+|++...+.+. ....+..|++|||+.+.||+..+|+
T Consensus 287 ~~~~~------------~~~~~~ki~viP~g~~~~~~~~~---------------~~r~~~~il~vGrl~~~Kg~~~li~ 339 (500)
T TIGR02918 287 NQFKK------------YYNIEPRIYTIPVGSLDELQYPE---------------QERKPFSIITASRLAKEKHIDWLVK 339 (500)
T ss_pred HHhhh------------hcCCCCcEEEEcCCCcccccCcc---------------cccCCeEEEEEeccccccCHHHHHH
Confidence 21111 11224568899999875543211 0123468999999999999999999
Q ss_pred HHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEE
Q 003508 261 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 340 (814)
Q Consensus 261 Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~ 340 (814)
|+.++.++.|++ .|+++|. +++ ++++++++.+.+.. + .|. |.|.. ++..+|+.||++
T Consensus 340 A~~~l~~~~p~~----~l~i~G~-----G~~----~~~l~~~i~~~~l~----~--~V~-f~G~~---~~~~~~~~adv~ 396 (500)
T TIGR02918 340 AVVKAKKSVPEL----TFDIYGE-----GGE----KQKLQKIINENQAQ----D--YIH-LKGHR---NLSEVYKDYELY 396 (500)
T ss_pred HHHHHHhhCCCe----EEEEEEC-----chh----HHHHHHHHHHcCCC----C--eEE-EcCCC---CHHHHHHhCCEE
Confidence 999999888874 5777763 333 34566666664321 1 255 56754 577899999999
Q ss_pred EECCCCccCChhHHHHhhhccCCCceEEEeCCC-Cccccc--CCceEEECC----CC----HHHHHHHHHHHhcCCHHHH
Q 003508 341 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNP----WN----ITEVANAIARALNMSPEER 409 (814)
Q Consensus 341 v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~-G~~e~l--g~~~~lvnP----~d----~~~lA~ai~~~L~~~~~er 409 (814)
|+||.+||||++++|||||| .|+|+|+.. |..+.+ |.+|++|++ .| ++++|++|.++|+ ++++
T Consensus 397 v~pS~~Egfgl~~lEAma~G----~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~ 470 (500)
T TIGR02918 397 LSASTSEGFGLTLMEAVGSG----LGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDI 470 (500)
T ss_pred EEcCccccccHHHHHHHHhC----CCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHH
Confidence 99999999999999999994 899999986 677777 789999984 33 8899999999994 3467
Q ss_pred HHHHHHHhHHHHHcCHHHHHHHHHHHHH
Q 003508 410 EKRHWHNFTHVTTHTAQEWAETFVSELN 437 (814)
Q Consensus 410 ~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 437 (814)
.++.+++++.++++++..-++++.+-++
T Consensus 471 ~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 471 DAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 7888888898999998887777766554
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.2e-21 Score=209.59 Aligned_cols=266 Identities=20% Similarity=0.219 Sum_probs=191.4
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccEEeEecHHHHHHHHHHHHHHh
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 187 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~DlIgf~~~~~~~~fl~~~~~~l 187 (814)
..|+|++|..+...+..++.+ ..++++.+.+|-.++.... .. ..+..+|.+.+.+....+.+. ..+
T Consensus 78 ~~dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~------~~---~~~~~~~~vi~~s~~~~~~~~----~~~ 143 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFR------YN---AIMARGDRVIAVSNFIADHIR----ENY 143 (355)
T ss_pred CCCEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHH------HH---HHHHhcCEEEEeCHHHHHHHH----Hhc
Confidence 469999998766555544444 3378899999976643221 11 224468988887765444433 222
Q ss_pred CcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---CCCeEEEEeccccccCCHHHHHHHHHH
Q 003508 188 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEK 264 (814)
Q Consensus 188 ~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VgRld~~KGi~~~l~Af~~ 264 (814)
+. ...++.++|+|+|...|.+.... ......+|+++ .++++|+++||+.+.||+..+++|+..
T Consensus 144 ~~-----------~~~k~~~i~ngi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~ 209 (355)
T cd03819 144 GV-----------DPDRIRVIPRGVDLDRFDPGAVP---PERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALAR 209 (355)
T ss_pred CC-----------ChhhEEEecCCccccccCccccc---hHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHH
Confidence 22 23578889999999887653221 12222345554 357789999999999999999999999
Q ss_pred HHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECC
Q 003508 265 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 344 (814)
Q Consensus 265 ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S 344 (814)
+.++.++ +.|+++|... ....+.+++.+.+.+.+.. ..|.+ .|+ .+++..+|+.||++++||
T Consensus 210 l~~~~~~----~~l~ivG~~~-----~~~~~~~~~~~~~~~~~~~------~~v~~-~g~--~~~~~~~l~~ad~~i~ps 271 (355)
T cd03819 210 LKKDDPD----VHLLIVGDAQ-----GRRFYYAELLELIKRLGLQ------DRVTF-VGH--CSDMPAAYALADIVVSAS 271 (355)
T ss_pred HHhcCCC----eEEEEEECCc-----ccchHHHHHHHHHHHcCCc------ceEEE-cCC--cccHHHHHHhCCEEEecC
Confidence 9876555 5588777532 1223444555555543221 13554 566 678999999999999999
Q ss_pred -CCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHH
Q 003508 345 -LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 421 (814)
Q Consensus 345 -~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~ 421 (814)
..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|..++..+++++.++.+++++.++
T Consensus 272 ~~~e~~~~~l~EA~a~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 272 TEPEAFGRTAVEAQAMG----RPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVE 347 (355)
T ss_pred CCCCCCchHHHHHHhcC----CCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 7899999999999995 899999998888877 457999999999999999998888778889888889888876
Q ss_pred Hc
Q 003508 422 TH 423 (814)
Q Consensus 422 ~~ 423 (814)
++
T Consensus 348 ~~ 349 (355)
T cd03819 348 TL 349 (355)
T ss_pred Hh
Confidence 53
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=8e-21 Score=209.94 Aligned_cols=251 Identities=18% Similarity=0.078 Sum_probs=171.1
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHH-HHhhccEEeEecHHHHHHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACTRI 186 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~-~ll~~DlIgf~~~~~~~~fl~~~~~~ 186 (814)
+.|+|++|..+...++.++.+......+.++.|..+...+.+........+.. .+..+|.+...+....+.+...
T Consensus 80 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~---- 155 (358)
T cd03812 80 KYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLFGK---- 155 (358)
T ss_pred CCCEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHHhC----
Confidence 56999999988766666666655555556777776543332211110001111 1234677666665444333210
Q ss_pred hCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---CCCeEEEEeccccccCCHHHHHHHHH
Q 003508 187 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFE 263 (814)
Q Consensus 187 l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VgRld~~KGi~~~l~Af~ 263 (814)
....++.++|+|||.+.|.+... ..+. ++.+ .++.+|+++||+.+.||++.+++|+.
T Consensus 156 -------------~~~~~~~vi~ngvd~~~~~~~~~---~~~~----~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~ 215 (358)
T cd03812 156 -------------VKNKKFKVIPNGIDLEKFIFNEE---IRKK----RRELGILEDKFVIGHVGRFSEQKNHEFLIEIFA 215 (358)
T ss_pred -------------CCcccEEEEeccCcHHHcCCCch---hhhH----HHHcCCCCCCEEEEEEeccccccChHHHHHHHH
Confidence 11357889999999988764321 1111 2222 46789999999999999999999999
Q ss_pred HHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEEC
Q 003508 264 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 343 (814)
Q Consensus 264 ~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~ 343 (814)
.+.+++|+ +.|+++|. ++.. .++++++.+.+. . ..|+ +.|. .+++..+|+.||++|+|
T Consensus 216 ~l~~~~~~----~~l~ivG~-----g~~~----~~~~~~~~~~~~----~--~~v~-~~g~--~~~~~~~~~~adi~v~p 273 (358)
T cd03812 216 ELLKKNPN----AKLLLVGD-----GELE----EEIKKKVKELGL----E--DKVI-FLGV--RNDVPELLQAMDVFLFP 273 (358)
T ss_pred HHHHhCCC----eEEEEEeC-----CchH----HHHHHHHHhcCC----C--CcEE-Eecc--cCCHHHHHHhcCEEEec
Confidence 99988876 45777763 2322 233444444321 1 2355 4565 67899999999999999
Q ss_pred CCCccCChhHHHHhhhccCCCceEEEeCCCCcccccCC-ceEEECCCCHHHHHHHHHHHhcCCHHH
Q 003508 344 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGA-GAILVNPWNITEVANAIARALNMSPEE 408 (814)
Q Consensus 344 S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~-~~~lvnP~d~~~lA~ai~~~L~~~~~e 408 (814)
|..||||++++|||||+ .|+|+|+.+|..+.+++ ++++..+.+++++|++|.++++++...
T Consensus 274 s~~E~~~~~~lEAma~G----~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~i~~l~~~~~~~ 335 (358)
T cd03812 274 SLYEGLPLVLIEAQASG----LPCILSDTITKEVDLTDLVKFLSLDESPEIWAEEILKLKSEDRRE 335 (358)
T ss_pred ccccCCCHHHHHHHHhC----CCEEEEcCCchhhhhccCccEEeCCCCHHHHHHHHHHHHhCcchh
Confidence 99999999999999994 89999999999988854 445556667899999999999988633
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-20 Score=210.61 Aligned_cols=305 Identities=13% Similarity=0.110 Sum_probs=189.9
Q ss_pred CCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCC------------------------cHHHHH--
Q 003508 107 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS------------------------RSDLLR-- 160 (814)
Q Consensus 107 ~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~------------------------~~~il~-- 160 (814)
.+.|++|.||++.-....++|+..+.++.+|+.|-. ++-|.|-. .+--++
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT----~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~ 222 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHAT----LLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERA 222 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEeccc----ccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHH
Confidence 467999999999999999999888999999999954 33332110 000112
Q ss_pred HHhhccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcC----CchHHHHHH----
Q 003508 161 AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI----NPVQVHIKE---- 232 (814)
Q Consensus 161 ~ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~----~~~~~~~~~---- 232 (814)
....||.+...+.... ..|..+++. ...+ |+|||||++.|.+.... ...++++..
T Consensus 223 aa~~Ad~fttVS~it~----~E~~~Ll~~------------~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~ 285 (590)
T cd03793 223 AAHCAHVFTTVSEITA----YEAEHLLKR------------KPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRG 285 (590)
T ss_pred HHhhCCEEEECChHHH----HHHHHHhCC------------CCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHH
Confidence 2234555554443222 123344432 2222 89999999998654211 011122222
Q ss_pred -HHHHhC---CCeEEEE-eccccc-cCCHHHHHHHHHHHHHhCccccC-ceEEEEEecCCCCCh---------HHHHHHH
Q 003508 233 -LQETFA---GRKVMLG-VDRLDM-IKGIPQKLLAFEKFLEENSDWRG-KVVLLQIAVPTRTDV---------PEYQRLT 296 (814)
Q Consensus 233 -lr~~~~---~~~vil~-VgRld~-~KGi~~~l~Af~~ll~~~p~~~~-~v~Lv~vg~p~r~~~---------~~~~~l~ 296 (814)
++..++ +++++++ +||+++ .||++.+|+|+.++-..-..-.. .-++..+..|+.... +-..+|+
T Consensus 286 ~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~ 365 (590)
T cd03793 286 HFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLR 365 (590)
T ss_pred HHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHH
Confidence 344442 5678877 899999 99999999999988652111111 112222334554321 2233455
Q ss_pred HHHHHHHHHhhcc--------------------------------------------------------------c-CCC
Q 003508 297 SQVHEIVGRINGR--------------------------------------------------------------F-GTL 313 (814)
Q Consensus 297 ~~l~~lv~~iN~~--------------------------------------------------------------~-g~~ 313 (814)
+.+..+..+|+.+ | +..
T Consensus 366 ~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~ 445 (590)
T cd03793 366 DTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPE 445 (590)
T ss_pred HHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCC
Confidence 5555544444433 0 112
Q ss_pred CcccEEEecCCCCH------HHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcc----cccC---
Q 003508 314 TAVPIHHLDRSLDF------PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA----QSLG--- 380 (814)
Q Consensus 314 ~~~~V~~~~g~v~~------~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~----e~lg--- 380 (814)
+.+.|+|...+++. .+...+|+.||+||+||++||||++++|||||+ .|+|+|..+|.. +.++
T Consensus 446 drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G----~PvI~t~~~gf~~~v~E~v~~~~ 521 (590)
T cd03793 446 DRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMG----IPSITTNLSGFGCFMEEHIEDPE 521 (590)
T ss_pred CeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcC----CCEEEccCcchhhhhHHHhccCC
Confidence 33446655444442 457889999999999999999999999999994 899999999984 4443
Q ss_pred CceEEEC-------CCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHH
Q 003508 381 AGAILVN-------PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 436 (814)
Q Consensus 381 ~~~~lvn-------P~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 436 (814)
..|++|. +.++++++++|.++++++..++........+....++|.+-+..+++.-
T Consensus 522 ~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~ 584 (590)
T cd03793 522 SYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKAR 584 (590)
T ss_pred CceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3578887 4568899999999997654333332222335567778777777666543
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.5e-20 Score=209.27 Aligned_cols=272 Identities=13% Similarity=0.090 Sum_probs=191.4
Q ss_pred CCCEEEEeCccchh-HHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHH-HhhccEEeEecHHHHHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMF-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA-VLAADLVGFHTYDYARHFVSACTR 185 (814)
Q Consensus 108 ~~DiI~ihdyhl~l-lp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~-ll~~DlIgf~~~~~~~~fl~~~~~ 185 (814)
+.|+++.|-++... ...+++++....++....|......+.+ .+....+.+. +..+|.|.+.+....+.+.+
T Consensus 127 ~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~--~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~---- 200 (407)
T cd04946 127 QGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRY--PSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK---- 200 (407)
T ss_pred CceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhc--cccchHHHHHHHhcCCEEEECCHHHHHHHHH----
Confidence 45666665544433 3345566655556788888532111111 1111122222 34689999888765544332
Q ss_pred HhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHHHHHHH
Q 003508 186 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 265 (814)
Q Consensus 186 ~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~Af~~l 265 (814)
.++ ....++.++|+|++...+.+.. ...++..|+++||+.+.||++.+++|+.++
T Consensus 201 ~~~-----------~~~~ki~vi~~gv~~~~~~~~~--------------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l 255 (407)
T cd04946 201 RYP-----------AYKEKIKVSYLGVSDPGIISKP--------------SKDDTLRIVSCSYLVPVKRVDLIIKALAAL 255 (407)
T ss_pred HCC-----------CccccEEEEECCcccccccCCC--------------CCCCCEEEEEeeccccccCHHHHHHHHHHH
Confidence 222 1245678899999987654320 013567899999999999999999999999
Q ss_pred HHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHh--ccEEEEC
Q 003508 266 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV--TDVALVT 343 (814)
Q Consensus 266 l~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~--ADv~v~~ 343 (814)
.+.+|+.. +.++.+|. ++. .+++++++.+.+ .. ..|+ +.|.++.+++.++|+. ||+|+.|
T Consensus 256 ~~~~p~~~--l~~~iiG~-----g~~----~~~l~~~~~~~~----~~--~~V~-f~G~v~~~e~~~~~~~~~~~v~v~~ 317 (407)
T cd04946 256 AKARPSIK--IKWTHIGG-----GPL----EDTLKELAESKP----EN--ISVN-FTGELSNSEVYKLYKENPVDVFVNL 317 (407)
T ss_pred HHhCCCce--EEEEEEeC-----chH----HHHHHHHHHhcC----CC--ceEE-EecCCChHHHHHHHhhcCCCEEEeC
Confidence 99888753 67776663 333 334455554321 11 1355 5799999999999986 7899999
Q ss_pred CCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECC-CCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHH
Q 003508 344 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP-WNITEVANAIARALNMSPEEREKRHWHNFTHV 420 (814)
Q Consensus 344 S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP-~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v 420 (814)
|..|||+++++|||||| .|+|+|+.+|..+.+ |.+|++++| .|++++|++|.+++++ ++++.++++++++.+
T Consensus 318 S~~Eg~p~~llEAma~G----~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~-~~~~~~m~~~ar~~~ 392 (407)
T cd04946 318 SESEGLPVSIMEAMSFG----IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSLSKFIDN-EEEYQTMREKAREKW 392 (407)
T ss_pred CccccccHHHHHHHHcC----CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHH
Confidence 99999999999999995 899999999999988 457899887 4899999999999985 468888888888886
Q ss_pred -HHcCHHHHHHHHH
Q 003508 421 -TTHTAQEWAETFV 433 (814)
Q Consensus 421 -~~~~~~~W~~~fl 433 (814)
+.+++..+.++|+
T Consensus 393 ~~~f~~~~~~~~~~ 406 (407)
T cd04946 393 EENFNASKNYREFA 406 (407)
T ss_pred HHHcCHHHhHHHhc
Confidence 5788888887775
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.8e-21 Score=209.26 Aligned_cols=276 Identities=20% Similarity=0.205 Sum_probs=198.2
Q ss_pred CCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCch--hhhcc---CCCcHHHHHHHhhccEEeEecHHHHHHHHH
Q 003508 107 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS--EIHRT---LPSRSDLLRAVLAADLVGFHTYDYARHFVS 181 (814)
Q Consensus 107 ~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~--e~~~~---lp~~~~il~~ll~~DlIgf~~~~~~~~fl~ 181 (814)
...|+||+|.+..... +..+.++.+.+|-.+|.. ..+.. ...+......+..+|.+.+.+......+.+
T Consensus 84 ~~~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~ 157 (365)
T cd03809 84 LGLDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLR 157 (365)
T ss_pred cCCCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHH
Confidence 4679999998777665 456788888889654421 11110 001223334466789999888765555543
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHHH
Q 003508 182 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 261 (814)
Q Consensus 182 ~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~A 261 (814)
..+. ...++.++|+|+|...+..... +. ........++++|+++||+.+.||+..+++|
T Consensus 158 ----~~~~-----------~~~~~~vi~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l~~ 216 (365)
T cd03809 158 ----YLGV-----------PPDKIVVIPLGVDPRFRPPPAE-----AE-VLRALYLLPRPYFLYVGTIEPRKNLERLLEA 216 (365)
T ss_pred ----HhCc-----------CHHHEEeeccccCccccCCCch-----HH-HHHHhcCCCCCeEEEeCCCccccCHHHHHHH
Confidence 1111 2346788999999887654211 11 1111223577899999999999999999999
Q ss_pred HHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEE
Q 003508 262 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 341 (814)
Q Consensus 262 f~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v 341 (814)
+..+.+.+|+ +.|+++|.... .+......+ .+. +.. ..|+ +.|.++.+++..+|+.||+++
T Consensus 217 ~~~~~~~~~~----~~l~i~G~~~~----~~~~~~~~~----~~~----~~~--~~v~-~~g~~~~~~~~~~~~~~d~~l 277 (365)
T cd03809 217 FARLPAKGPD----PKLVIVGKRGW----LNEELLARL----REL----GLG--DRVR-FLGYVSDEELAALYRGARAFV 277 (365)
T ss_pred HHHHHHhcCC----CCEEEecCCcc----ccHHHHHHH----HHc----CCC--CeEE-ECCCCChhHHHHHHhhhhhhc
Confidence 9999888764 45776764321 111122222 122 111 2344 679999999999999999999
Q ss_pred ECCCCccCChhHHHHhhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHH
Q 003508 342 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 421 (814)
Q Consensus 342 ~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~ 421 (814)
+||..||||++++|||+|+ .|+|+|+.+|..+.++.+|+++++.|.++++++|.+++++ ++.+..+.+++++.++
T Consensus 278 ~ps~~e~~~~~~~Ea~a~G----~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~ 352 (365)
T cd03809 278 FPSLYEGFGLPVLEAMACG----TPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLED-PALREELRERGLARAK 352 (365)
T ss_pred ccchhccCCCCHHHHhcCC----CcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence 9999999999999999994 8999999988888888899999999999999999999875 4577777788888899
Q ss_pred HcCHHHHHHHHH
Q 003508 422 THTAQEWAETFV 433 (814)
Q Consensus 422 ~~~~~~W~~~fl 433 (814)
+++|+.++++++
T Consensus 353 ~~sw~~~~~~~~ 364 (365)
T cd03809 353 RFSWEKTARRTL 364 (365)
T ss_pred hCCHHHHHHHHh
Confidence 999999998875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.3e-20 Score=205.63 Aligned_cols=280 Identities=20% Similarity=0.182 Sum_probs=192.2
Q ss_pred CCCEEEEeCcc-ch--hHHHHHHh--hCCCCeEEEEEecCCCchhhhccCCCcHHHHH-HHhhccEEeEecHHHHHHHHH
Q 003508 108 DGDVVWCHDYH-LM--FLPKCLKE--YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVS 181 (814)
Q Consensus 108 ~~DiI~ihdyh-l~--llp~~lr~--~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~-~ll~~DlIgf~~~~~~~~fl~ 181 (814)
..|+|++|+++ ++ .....+.. +..+.++.+.+|...+.... .....+.+ .+..+|.|.+.+.+.++.+..
T Consensus 76 ~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 151 (366)
T cd03822 76 GPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPR----PGDRALLRLLLRRADAVIVMSSELLRALLL 151 (366)
T ss_pred CCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccc----hhhhHHHHHHHhcCCEEEEeeHHHHHHHHh
Confidence 46999998732 21 11111111 23678999999986222111 11122222 244689999887444444432
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHHH
Q 003508 182 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 261 (814)
Q Consensus 182 ~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~A 261 (814)
. ....++.++|+|+|...+..... . +. .....++++|+++||+.+.||+..+++|
T Consensus 152 ~-----------------~~~~~~~~i~~~~~~~~~~~~~~------~-~~-~~~~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 152 R-----------------AYPEKIAVIPHGVPDPPAEPPES------L-KA-LGGLDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred h-----------------cCCCcEEEeCCCCcCcccCCchh------h-Hh-hcCCCCCeEEEEEeeccCCCCHHHHHHH
Confidence 0 00247888999999876643211 1 11 1112467899999999999999999999
Q ss_pred HHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEE
Q 003508 262 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 341 (814)
Q Consensus 262 f~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v 341 (814)
++++.+++|+ +.|+++|.... ..........+++.+.+. . ..|+++.+.++.+++..+|+.||+++
T Consensus 207 ~~~~~~~~~~----~~l~i~G~~~~----~~~~~~~~~~~~i~~~~~----~--~~v~~~~~~~~~~~~~~~~~~ad~~v 272 (366)
T cd03822 207 LPLLVAKHPD----VRLLVAGETHP----DLERYRGEAYALAERLGL----A--DRVIFINRYLPDEELPELFSAADVVV 272 (366)
T ss_pred HHHHHhhCCC----eEEEEeccCcc----chhhhhhhhHhHHHhcCC----C--CcEEEecCcCCHHHHHHHHhhcCEEE
Confidence 9999888776 45777764321 111111110122333321 1 24666555599999999999999999
Q ss_pred ECCCCc--cCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q 003508 342 VTSLRD--GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 417 (814)
Q Consensus 342 ~~S~~E--G~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~ 417 (814)
+||..| |++++++|||||| .|+|+|+.+| .+.+ +.+|+++++.|+++++++|.++++++ +.+.++.++.+
T Consensus 273 ~ps~~e~~~~~~~~~Ea~a~G----~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~-~~~~~~~~~~~ 346 (366)
T cd03822 273 LPYRSADQTQSGVLAYAIGFG----KPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADP-ELAQALRARAR 346 (366)
T ss_pred ecccccccccchHHHHHHHcC----CCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcCh-HHHHHHHHHHH
Confidence 999999 9999999999995 8999999888 6666 56899999999999999999999865 46777888889
Q ss_pred HHHHHcCHHHHHHHHHHHH
Q 003508 418 THVTTHTAQEWAETFVSEL 436 (814)
Q Consensus 418 ~~v~~~~~~~W~~~fl~~l 436 (814)
++++++++..+++++++.+
T Consensus 347 ~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 347 EYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHhhCCHHHHHHHHHHHh
Confidence 9998899999999887654
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.5e-20 Score=202.66 Aligned_cols=278 Identities=17% Similarity=0.173 Sum_probs=185.5
Q ss_pred CCCCCEEEEeCccch-hHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHH-----HH-HHhhccEEeEecHHHHHH
Q 003508 106 YKDGDVVWCHDYHLM-FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDL-----LR-AVLAADLVGFHTYDYARH 178 (814)
Q Consensus 106 ~~~~DiI~ihdyhl~-llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~i-----l~-~ll~~DlIgf~~~~~~~~ 178 (814)
....|+|++|+.... ..+.....+..+.++.++.|..++....... +....+ .. .+..+|.+.+.+......
T Consensus 85 ~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~ 163 (375)
T cd03821 85 IREADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHK-ALKKRLAWFLFERRLLQAAAAVHATSEQEAAE 163 (375)
T ss_pred CCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccccc-hhhhHHHHHHHHHHHHhcCCEEEECCHHHHHH
Confidence 356799999984332 2222222223467888888876543321000 011111 11 123456666665433222
Q ss_pred HHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---CCCeEEEEeccccccCCH
Q 003508 179 FVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGI 255 (814)
Q Consensus 179 fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VgRld~~KGi 255 (814)
... .....++.++|+|+|.+.|.+... . .. |+.+ .++++|+++||+.+.||+
T Consensus 164 ~~~-----------------~~~~~~~~vi~~~~~~~~~~~~~~-----~--~~-~~~~~~~~~~~~i~~~G~~~~~K~~ 218 (375)
T cd03821 164 IRR-----------------LGLKAPIAVIPNGVDIPPFAALPS-----R--GR-RRKFPILPDKRIILFLGRLHPKKGL 218 (375)
T ss_pred HHh-----------------hCCcccEEEcCCCcChhccCcchh-----h--hh-hhhccCCCCCcEEEEEeCcchhcCH
Confidence 111 112456889999999988764321 0 01 2323 367899999999999999
Q ss_pred HHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003508 256 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 335 (814)
Q Consensus 256 ~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~ 335 (814)
..+++|+.++.+++|+ +.|+++|... +.+ ...++.++.+.+ .. ..|+ +.|.++.+++..+|+
T Consensus 219 ~~li~a~~~l~~~~~~----~~l~i~G~~~----~~~---~~~~~~~~~~~~----~~--~~v~-~~g~~~~~~~~~~~~ 280 (375)
T cd03821 219 DLLIEAFAKLAERFPD----WHLVIAGPDE----GGY---RAELKQIAAALG----LE--DRVT-FTGMLYGEDKAAALA 280 (375)
T ss_pred HHHHHHHHHhhhhcCC----eEEEEECCCC----cch---HHHHHHHHHhcC----cc--ceEE-EcCCCChHHHHHHHh
Confidence 9999999999888776 4577776422 112 222333333332 11 1355 579999999999999
Q ss_pred hccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcccccC-CceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 003508 336 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLG-AGAILVNPWNITEVANAIARALNMSPEEREKRHW 414 (814)
Q Consensus 336 ~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg-~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~ 414 (814)
.||++|+||..||||++++|||+|| .|+|+|+.+|..+.+. ..|+++ |.+.++++++|.++++++ +++..+.+
T Consensus 281 ~adv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~~~~-~~~~~~~~ 354 (375)
T cd03821 281 DADLFVLPSHSENFGIVVAEALACG----TPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAALRRALELP-QRLKAMGE 354 (375)
T ss_pred hCCEEEeccccCCCCcHHHHHHhcC----CCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHHHHHHhCH-HHHHHHHH
Confidence 9999999999999999999999995 8999999999888884 345555 456699999999999987 67777888
Q ss_pred HHhHH-HHHcCHHHHHHHHH
Q 003508 415 HNFTH-VTTHTAQEWAETFV 433 (814)
Q Consensus 415 ~~~~~-v~~~~~~~W~~~fl 433 (814)
++++. .+.+++..-+++++
T Consensus 355 ~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 355 NGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHHHhcCHHHHHHHhh
Confidence 88887 67788777777664
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.2e-20 Score=201.38 Aligned_cols=191 Identities=17% Similarity=0.183 Sum_probs=145.0
Q ss_pred eecccChhhhhhhhcCCchHHHHHHHHHHh----CCCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEec
Q 003508 208 FPIGIDSERFIRALEINPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 283 (814)
Q Consensus 208 ~p~GId~~~f~~~~~~~~~~~~~~~lr~~~----~~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~ 283 (814)
+|+|||++.|.+... ...++|+++ .+..+|++|||+++.||+..+|+|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~------~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~ 191 (335)
T PHA01633 118 VFHGINFKIVENAEK------LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH 191 (335)
T ss_pred eeCCCChhhcCccch------hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH
Confidence 678999998875321 112334333 4667899999999999999999999999999998765677776541
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEec--CCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhcc
Q 003508 284 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD--RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD 361 (814)
Q Consensus 284 p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~--g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~ 361 (814)
.. +++ + +..+ .|+++. |.++.+++.++|+.||+||+||..||||++++|||||+
T Consensus 192 ------~~-------~~~----l----~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G- 247 (335)
T PHA01633 192 ------KQ-------FTQ----L----EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMG- 247 (335)
T ss_pred ------HH-------HHH----c----CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcC-
Confidence 11 111 1 1111 366543 67789999999999999999999999999999999995
Q ss_pred CCCceEEEeCCCCcccccC------------------C--ceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHH
Q 003508 362 LKKGVLILSEFAGAAQSLG------------------A--GAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 421 (814)
Q Consensus 362 ~~~g~vVlS~~~G~~e~lg------------------~--~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~ 421 (814)
.|+|+|+.+|..|.+| . .|++++++|++++|++|.+++.++. +.++..++++..+
T Consensus 248 ---~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~--~~~~~~~~~~~a~ 322 (335)
T PHA01633 248 ---TPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD--REERSMKLKELAK 322 (335)
T ss_pred ---CCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--hhhhhHHHHHHHH
Confidence 8999999988887653 1 2457889999999999999987753 3344556778899
Q ss_pred HcCHHHHHHHHH
Q 003508 422 THTAQEWAETFV 433 (814)
Q Consensus 422 ~~~~~~W~~~fl 433 (814)
+++++.-.++|+
T Consensus 323 ~f~~~~~~~~~~ 334 (335)
T PHA01633 323 KYDIRNLYTRFL 334 (335)
T ss_pred hcCHHHHHHHhh
Confidence 999888777665
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-20 Score=211.38 Aligned_cols=187 Identities=15% Similarity=0.051 Sum_probs=130.0
Q ss_pred EEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccc--cccCCHHHHHHHHHHHHHhCccccCceEEEE
Q 003508 203 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL--DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 280 (814)
Q Consensus 203 ~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRl--d~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~ 280 (814)
.++.++|||||++.+....... ..+ ...++++|++|+|. ++.||+..+++|+..+ .+ ++.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~~~-------~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAELP-------PVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccccc-------ccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEE
Confidence 4688899999975432211100 001 12467789999994 4789999999999875 22 366887
Q ss_pred EecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCC-CHHHHHHHHHhccEEEECCCCccCChhHHHHhhh
Q 003508 281 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSL-DFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 359 (814)
Q Consensus 281 vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v-~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~ 359 (814)
+|.+. +.. . ..|.++ |.. +.+++..+|+.||+||+||.+||||++++|||||
T Consensus 277 vG~g~----~~~------------------~----~~v~~~-g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~ 329 (405)
T PRK10125 277 FGKFS----PFT------------------A----GNVVNH-GFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI 329 (405)
T ss_pred EcCCC----ccc------------------c----cceEEe-cCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc
Confidence 77421 100 0 124433 443 6789999999999999999999999999999999
Q ss_pred ccCCCceEEEeCCCCccccc-CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHH-HHHcCHHHHHHHHHHHHH
Q 003508 360 QDLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTHTAQEWAETFVSELN 437 (814)
Q Consensus 360 ~~~~~g~vVlS~~~G~~e~l-g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~-v~~~~~~~W~~~fl~~l~ 437 (814)
+ .|||+|+.+|+.|.+ +.+|++|+|.|++++|+++...+... .......+.++. .+.|++..-++++++..+
T Consensus 330 G----~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~ 403 (405)
T PRK10125 330 G----VPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQ 403 (405)
T ss_pred C----CCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 5 899999999998888 45899999999999998643222100 000112335555 456888888888876554
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-20 Score=206.94 Aligned_cols=279 Identities=19% Similarity=0.148 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCC-CchhhhccCCC---cHHHHHHHhhccEEe
Q 003508 94 ANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPF-PSSEIHRTLPS---RSDLLRAVLAADLVG 169 (814)
Q Consensus 94 vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pf-p~~e~~~~lp~---~~~il~~ll~~DlIg 169 (814)
.-+.|.+.+.. .++.|+|++|..+.... .+.......++..++|... .....-...++ .+.++..+..+|.|.
T Consensus 86 l~~~~l~~l~~-~~~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 162 (372)
T cd04949 86 LFAFFLDELNK-DTKPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVI 162 (372)
T ss_pred HHHHHHHHHhc-CCCCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEE
Confidence 33334444443 46789998887776654 2233334455666777532 11100000111 234445566789998
Q ss_pred EecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccc
Q 003508 170 FHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL 249 (814)
Q Consensus 170 f~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRl 249 (814)
+.+....+.+.. .++ ...++.++|+|++...+.+.. .....+..|+++||+
T Consensus 163 ~~s~~~~~~l~~----~~~------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl 213 (372)
T cd04949 163 VATEQQKQDLQK----QFG------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARL 213 (372)
T ss_pred EccHHHHHHHHH----HhC------------CCCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEcc
Confidence 888765555543 111 112377899999987765321 011356789999999
Q ss_pred cccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHH
Q 003508 250 DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPA 329 (814)
Q Consensus 250 d~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~e 329 (814)
.+.||+..+|+|+.++.+++|++ .|+++|.+ +.. ..+..++.+.+. .+ .|. +.|. .++
T Consensus 214 ~~~K~~~~li~a~~~l~~~~~~~----~l~i~G~g-----~~~----~~~~~~~~~~~~----~~--~v~-~~g~--~~~ 271 (372)
T cd04949 214 APEKQLDQLIKAFAKVVKQVPDA----TLDIYGYG-----DEE----EKLKELIEELGL----ED--YVF-LKGY--TRD 271 (372)
T ss_pred CcccCHHHHHHHHHHHHHhCCCc----EEEEEEeC-----chH----HHHHHHHHHcCC----cc--eEE-EcCC--CCC
Confidence 99999999999999999998875 47767643 222 223334333322 11 244 5663 467
Q ss_pred HHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCC-Cccccc--CCceEEECCCCHHHHHHHHHHHhcCCH
Q 003508 330 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA-GAAQSL--GAGAILVNPWNITEVANAIARALNMSP 406 (814)
Q Consensus 330 l~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~-G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~ 406 (814)
+..+|+.||++|+||..||||++++|||+|| .|+|+|+.+ |..+.+ |.+|++++|.|++++|++|.++++++
T Consensus 272 ~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G----~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~ll~~~- 346 (372)
T cd04949 272 LDEVYQKAQLSLLTSQSEGFGLSLMEALSHG----LPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIELLNDP- 346 (372)
T ss_pred HHHHHhhhhEEEecccccccChHHHHHHhCC----CCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHHHcCH-
Confidence 9999999999999999999999999999994 899999877 677777 67999999999999999999999875
Q ss_pred HHHHHHHHHHhHHHHHcCHHHHHHH
Q 003508 407 EEREKRHWHNFTHVTTHTAQEWAET 431 (814)
Q Consensus 407 ~er~~r~~~~~~~v~~~~~~~W~~~ 431 (814)
+.+.++..++++..+++++..++++
T Consensus 347 ~~~~~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 347 KLLQKFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHhc
Confidence 5677777888887888777766553
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-19 Score=198.43 Aligned_cols=266 Identities=19% Similarity=0.179 Sum_probs=191.3
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccEEeEecHHHHHHHHHHHHHHh
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 187 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~DlIgf~~~~~~~~fl~~~~~~l 187 (814)
..|+||+|..+...+..++..+....+..+.+|.+-.... +........+..+|.+...+....+.+.+ ..
T Consensus 79 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~----~~ 149 (355)
T cd03799 79 GIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIR----LL 149 (355)
T ss_pred CCCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHH----hc
Confidence 5699999987655555555555557888888885421111 11123334455799999888766555433 11
Q ss_pred CcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHHHHHHHHH
Q 003508 188 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 267 (814)
Q Consensus 188 ~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~Af~~ll~ 267 (814)
+ ....++.++|+|+|.+.|.+.. .....++..|+++||+.+.||++.+++|++.+.+
T Consensus 150 ~-----------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~ 206 (355)
T cd03799 150 G-----------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALALLKD 206 (355)
T ss_pred C-----------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHHHhh
Confidence 2 1245788999999988776431 0112456789999999999999999999999877
Q ss_pred hCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCC-
Q 003508 268 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR- 346 (814)
Q Consensus 268 ~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~- 346 (814)
..|+ +.|+++|.. +. ..++++.+.+.+.. ..|. +.|.++.+++..+|+.||++++||..
T Consensus 207 ~~~~----~~l~i~G~~-----~~----~~~~~~~~~~~~~~------~~v~-~~g~~~~~~l~~~~~~adi~l~~s~~~ 266 (355)
T cd03799 207 RGID----FRLDIVGDG-----PL----RDELEALIAELGLE------DRVT-LLGAKSQEEVRELLRAADLFVLPSVTA 266 (355)
T ss_pred cCCC----eEEEEEECC-----cc----HHHHHHHHHHcCCC------CeEE-ECCcCChHHHHHHHHhCCEEEecceec
Confidence 6555 557777642 22 23344555544311 1244 67999999999999999999999999
Q ss_pred -----ccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHH
Q 003508 347 -----DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 419 (814)
Q Consensus 347 -----EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~ 419 (814)
||||++++|||+|+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.+++.++ +++..+.+++++.
T Consensus 267 ~~~~~e~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~a~~~ 341 (355)
T cd03799 267 ADGDREGLPVVLMEAMAMG----LPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERLLDDP-ELRREMGEAGRAR 341 (355)
T ss_pred CCCCccCccHHHHHHHHcC----CCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Confidence 99999999999994 899999988887777 45799999999999999999999875 4567777778877
Q ss_pred HH-HcCHHHHHH
Q 003508 420 VT-THTAQEWAE 430 (814)
Q Consensus 420 v~-~~~~~~W~~ 430 (814)
++ .|++...++
T Consensus 342 ~~~~~s~~~~~~ 353 (355)
T cd03799 342 VEEEFDIRKQAA 353 (355)
T ss_pred HHHhcCHHHHhh
Confidence 64 566655443
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-19 Score=197.26 Aligned_cols=277 Identities=20% Similarity=0.199 Sum_probs=191.6
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCC-cHHHHHHH-hhccEEeEecHHHHHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS-RSDLLRAV-LAADLVGFHTYDYARHFVSACTR 185 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~-~~~il~~l-l~~DlIgf~~~~~~~~fl~~~~~ 185 (814)
..|+|++|+++...............++.+..|...+... ...+. ...+..-+ ..+|.+...+......+..
T Consensus 80 ~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~---- 153 (365)
T cd03807 80 RPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG--KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQA---- 153 (365)
T ss_pred CCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc--chhHhHHHHHHHHhccccCeEEeccHHHHHHHHH----
Confidence 4699999999887777766665467888888887654321 00111 11111222 2356665555443333221
Q ss_pred HhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---CCCeEEEEeccccccCCHHHHHHHH
Q 003508 186 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAF 262 (814)
Q Consensus 186 ~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VgRld~~KGi~~~l~Af 262 (814)
. +. ...++.++|+|+|...|.+... ....+++++ .++++|+++||+.+.||+..+++|+
T Consensus 154 ~-~~-----------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~ 215 (365)
T cd03807 154 I-GY-----------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA 215 (365)
T ss_pred c-CC-----------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHH
Confidence 1 21 2346778999999887764321 112233444 3567899999999999999999999
Q ss_pred HHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHH-HhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEE
Q 003508 263 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVG-RINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 341 (814)
Q Consensus 263 ~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~-~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v 341 (814)
..+.+++|+ +.|+++|.+. ....+ +.... .. +.. ..|. +.|. .+++..+|+.||+++
T Consensus 216 ~~l~~~~~~----~~l~i~G~~~-----~~~~~----~~~~~~~~----~~~--~~v~-~~g~--~~~~~~~~~~adi~v 273 (365)
T cd03807 216 ALLLKKFPN----ARLLLVGDGP-----DRANL----ELLALKEL----GLE--DKVI-LLGE--RSDVPALLNALDVFV 273 (365)
T ss_pred HHHHHhCCC----eEEEEecCCc-----chhHH----HHHHHHhc----CCC--ceEE-Eccc--cccHHHHHHhCCEEE
Confidence 999888766 4577776432 11111 22222 22 211 1244 4453 468999999999999
Q ss_pred ECCCCccCChhHHHHhhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHH
Q 003508 342 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVT 421 (814)
Q Consensus 342 ~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~ 421 (814)
+||..||||++++|||+|+ .|+|+|+.+|..+.+.++|+++++.|+++++++|.++++++ +++.++..++++++.
T Consensus 274 ~ps~~e~~~~~~~Ea~a~g----~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~ 348 (365)
T cd03807 274 LSSLSEGFPNVLLEAMACG----LPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIEALLADP-ALRQALGEAARERIE 348 (365)
T ss_pred eCCccccCCcHHHHHHhcC----CCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHH
Confidence 9999999999999999995 89999999999888855899999999999999999999976 567777778887764
Q ss_pred -HcCHHHHHHHHHHH
Q 003508 422 -THTAQEWAETFVSE 435 (814)
Q Consensus 422 -~~~~~~W~~~fl~~ 435 (814)
.+++..-++++++.
T Consensus 349 ~~~s~~~~~~~~~~~ 363 (365)
T cd03807 349 ENFSIEAMVEAYEEL 363 (365)
T ss_pred HhCCHHHHHHHHHHH
Confidence 58888888877654
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.2e-19 Score=197.38 Aligned_cols=271 Identities=20% Similarity=0.205 Sum_probs=188.5
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcH---------HHH-HHHhhccEEeEecHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS---------DLL-RAVLAADLVGFHTYDYAR 177 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~---------~il-~~ll~~DlIgf~~~~~~~ 177 (814)
..|+|++|+...+........+..+.++.+.+|.+++ ++....+... .+. ..+..+|.+.+.+.....
T Consensus 84 ~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 161 (374)
T cd03817 84 GPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYE--DYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIAD 161 (374)
T ss_pred CCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHH--HHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHH
Confidence 4599999987544333333333457889999998775 2222222111 111 223468888887775433
Q ss_pred HHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---CCCeEEEEeccccccCC
Q 003508 178 HFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKG 254 (814)
Q Consensus 178 ~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VgRld~~KG 254 (814)
.+.. .+ ...++.++|+|+|...|.+... .. .++.+ .++++|+++||+.+.||
T Consensus 162 ~~~~-----~~------------~~~~~~vi~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~i~~~G~~~~~k~ 216 (374)
T cd03817 162 LLRE-----YG------------VKRPIEVIPTGIDLDRFEPVDG----DD----ERRKLGIPEDEPVLLYVGRLAKEKN 216 (374)
T ss_pred HHHh-----cC------------CCCceEEcCCccchhccCccch----hH----HHHhcCCCCCCeEEEEEeeeecccC
Confidence 3321 11 1234788999999887764321 01 12222 35678999999999999
Q ss_pred HHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHH
Q 003508 255 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 334 (814)
Q Consensus 255 i~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly 334 (814)
+..+++|++.+.++.++ +.|+++|. ++. .+++++++.+.+.. ..|. +.|.++.+++..+|
T Consensus 217 ~~~l~~~~~~~~~~~~~----~~l~i~G~-----~~~----~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~ 276 (374)
T cd03817 217 IDFLIRAFARLLKEEPD----VKLVIVGD-----GPE----REELEELARELGLA------DRVI-FTGFVPREELPDYY 276 (374)
T ss_pred HHHHHHHHHHHHHhCCC----eEEEEEeC-----Cch----HHHHHHHHHHcCCC------CcEE-EeccCChHHHHHHH
Confidence 99999999998877655 55777763 222 23445555443321 2355 57899999999999
Q ss_pred HhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHH
Q 003508 335 AVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKR 412 (814)
Q Consensus 335 ~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r 412 (814)
+.||++++||..||+|++++|||+|+ .|+|+|+.++..+.+ +.+|+++++.|. +++++|.++++++. .++++
T Consensus 277 ~~ad~~l~~s~~e~~~~~~~Ea~~~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~-~~~~~ 350 (374)
T cd03817 277 KAADLFVFASTTETQGLVLLEAMAAG----LPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPE-LRRRL 350 (374)
T ss_pred HHcCEEEecccccCcChHHHHHHHcC----CcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChH-HHHHH
Confidence 99999999999999999999999994 899999999888887 468999999888 99999999998764 55677
Q ss_pred HHHHhHHHHHcCHHHHHHHHHH
Q 003508 413 HWHNFTHVTTHTAQEWAETFVS 434 (814)
Q Consensus 413 ~~~~~~~v~~~~~~~W~~~fl~ 434 (814)
.++.++.+++++ |.+.+.+
T Consensus 351 ~~~~~~~~~~~~---~~~~~~~ 369 (374)
T cd03817 351 SKNAEESAEKFS---FAKKVEK 369 (374)
T ss_pred HHHHHHHHHHHH---HHHHHHH
Confidence 777888887755 4444443
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2e-19 Score=200.63 Aligned_cols=263 Identities=14% Similarity=0.107 Sum_probs=175.1
Q ss_pred CCCEEEEeCccchhHHHHHHhh-CCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccEEeEecHHHHHHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 186 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~-~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~DlIgf~~~~~~~~fl~~~~~~ 186 (814)
+.|+||+|+.....+..++++. ....++..+.|..++....+ ....+..+|.+...+....+.+..
T Consensus 84 ~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~--------~~~~~~~~d~~i~~S~~~~~~~~~----- 150 (359)
T PRK09922 84 QPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHA--------ECKKITCADYHLAISSGIKEQMMA----- 150 (359)
T ss_pred CCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchh--------hhhhhhcCCEEEEcCHHHHHHHHH-----
Confidence 4599999997776666666554 33345555667544322111 112235688888777654444321
Q ss_pred hCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEecccc--ccCCHHHHHHHHHH
Q 003508 187 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD--MIKGIPQKLLAFEK 264 (814)
Q Consensus 187 l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld--~~KGi~~~l~Af~~ 264 (814)
.+. ...++.++|||||.+.+.... + ...++++|+++||+. +.||+..+++|+..
T Consensus 151 ~~~-----------~~~ki~vi~N~id~~~~~~~~--~-----------~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~ 206 (359)
T PRK09922 151 RGI-----------SAQRISVIYNPVEIKTIIIPP--P-----------ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQ 206 (359)
T ss_pred cCC-----------CHHHEEEEcCCCCHHHccCCC--c-----------ccCCCcEEEEEEEEecccCcCHHHHHHHHHh
Confidence 122 124678899999976553211 0 013467899999996 46999999999987
Q ss_pred HHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCC--HHHHHHHHHhccEEEE
Q 003508 265 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD--FPALCALYAVTDVALV 342 (814)
Q Consensus 265 ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~--~~el~aly~~ADv~v~ 342 (814)
+. + ++.|+++|. +++ ++++++++++.|.. ..|+ |.|.++ .+++..+|..||++|+
T Consensus 207 ~~---~----~~~l~ivG~-----g~~----~~~l~~~~~~~~l~------~~v~-f~G~~~~~~~~~~~~~~~~d~~v~ 263 (359)
T PRK09922 207 TT---G----EWQLHIIGD-----GSD----FEKCKAYSRELGIE------QRII-WHGWQSQPWEVVQQKIKNVSALLL 263 (359)
T ss_pred hC---C----CeEEEEEeC-----Ccc----HHHHHHHHHHcCCC------CeEE-EecccCCcHHHHHHHHhcCcEEEE
Confidence 62 2 366887774 333 33455666554421 2355 567664 4899999999999999
Q ss_pred CCCCccCChhHHHHhhhccCCCceEEEeC-CCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHH
Q 003508 343 TSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 419 (814)
Q Consensus 343 ~S~~EG~~Lv~lEama~~~~~~g~vVlS~-~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~ 419 (814)
||..||||++++|||||+ .|+|+|+ .+|..+.+ |.+|++|+|.|++++|++|.++++++. .| ......+.
T Consensus 264 ~s~~Egf~~~~lEAma~G----~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~~-~~--~~~~~~~~ 336 (359)
T PRK09922 264 TSKFEGFPMTLLEAMSYG----IPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGEV-KY--QHDAIPNS 336 (359)
T ss_pred CCcccCcChHHHHHHHcC----CCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCcc-cC--CHHHHHHH
Confidence 999999999999999995 8999999 78888777 678999999999999999999998774 21 11222233
Q ss_pred HHHcCHHHHHHHHHHHHH
Q 003508 420 VTTHTAQEWAETFVSELN 437 (814)
Q Consensus 420 v~~~~~~~W~~~fl~~l~ 437 (814)
+.++......+++...+.
T Consensus 337 ~~~~~~~~~~~~~~~~~~ 354 (359)
T PRK09922 337 IERFYEVLYFKNLNNALF 354 (359)
T ss_pred HHHhhHHHHHHHHHHHHH
Confidence 444444444444444443
|
|
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.6e-19 Score=194.73 Aligned_cols=279 Identities=19% Similarity=0.177 Sum_probs=195.0
Q ss_pred CCCCCEEEEeC-ccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccC-CC-------cHHHH-HHHhhccEEeEecHHH
Q 003508 106 YKDGDVVWCHD-YHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL-PS-------RSDLL-RAVLAADLVGFHTYDY 175 (814)
Q Consensus 106 ~~~~DiI~ihd-yhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~l-p~-------~~~il-~~ll~~DlIgf~~~~~ 175 (814)
....|+|++|. ..+..++.....+..+.++.+.+|..+|........ .. ...+. ..+..+|.+.+.+...
T Consensus 97 ~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~ 176 (394)
T cd03794 97 RRRPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGM 176 (394)
T ss_pred ccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHH
Confidence 34679999997 334444444444455789999999877643221111 11 11111 2244689999988877
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCH
Q 003508 176 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGI 255 (814)
Q Consensus 176 ~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi 255 (814)
.+.+.. .+ ....++.++|+|+|...+.+.... ...... ....++.+|+++||+.+.||+
T Consensus 177 ~~~~~~-----~~-----------~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~i~~~G~~~~~k~~ 235 (394)
T cd03794 177 REYLVR-----RG-----------VPPEKISVIPNGVDLELFKPPPAD----ESLRKE-LGLDDKFVVLYAGNIGRAQGL 235 (394)
T ss_pred HHHHHh-----cC-----------CCcCceEEcCCCCCHHHcCCccch----hhhhhc-cCCCCcEEEEEecCcccccCH
Confidence 665541 11 123578899999998877643211 000100 112467889999999999999
Q ss_pred HHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003508 256 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 335 (814)
Q Consensus 256 ~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~ 335 (814)
..+++|+.++.+. |+ +.|+++|. ++....+ .+++... + ...|.+ .|.++.+++..+|+
T Consensus 236 ~~l~~~~~~l~~~-~~----~~l~i~G~-----~~~~~~~----~~~~~~~----~---~~~v~~-~g~~~~~~~~~~~~ 293 (394)
T cd03794 236 DTLLEAAALLKDR-PD----IRFLIVGD-----GPEKEEL----KELAKAL----G---LDNVTF-LGRVPKEELPELLA 293 (394)
T ss_pred HHHHHHHHHHhhc-CC----eEEEEeCC-----cccHHHH----HHHHHHc----C---CCcEEE-eCCCChHHHHHHHH
Confidence 9999999998765 44 55776663 2222222 3322221 1 134665 56999999999999
Q ss_pred hccEEEECCCCccC-----ChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHH
Q 003508 336 VTDVALVTSLRDGM-----NLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 408 (814)
Q Consensus 336 ~ADv~v~~S~~EG~-----~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~e 408 (814)
.||++++||..|++ ++.++|||+|| .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++ ++
T Consensus 294 ~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G----~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~ 368 (394)
T cd03794 294 AADVGLVPLKPGPAFEGVSPSKLFEYMAAG----KPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDP-EE 368 (394)
T ss_pred hhCeeEEeccCcccccccCchHHHHHHHCC----CcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhCh-HH
Confidence 99999999999876 66689999994 899999999999888 35799999999999999999999654 57
Q ss_pred HHHHHHHHhHHHH-HcCHHHHHHHH
Q 003508 409 REKRHWHNFTHVT-THTAQEWAETF 432 (814)
Q Consensus 409 r~~r~~~~~~~v~-~~~~~~W~~~f 432 (814)
+.++.+++++++. .|++..+++++
T Consensus 369 ~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 369 RAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 7778888888876 78888888765
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.7e-19 Score=191.71 Aligned_cols=279 Identities=22% Similarity=0.186 Sum_probs=199.8
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhc----cCCCcHHHHHHHhhccEEeEecHHHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHR----TLPSRSDLLRAVLAADLVGFHTYDYARHFVSAC 183 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~----~lp~~~~il~~ll~~DlIgf~~~~~~~~fl~~~ 183 (814)
..|+|++|+++...+.. +..+..+.++.+.+|.+++...... ...........+..+|.+.+.+....+.+.+.
T Consensus 85 ~~Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~- 162 (374)
T cd03801 85 RFDVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATREELREL- 162 (374)
T ss_pred CCcEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-
Confidence 56999999998887665 3344567899999998876432110 00011122233456788888887655544321
Q ss_pred HHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHH---hCCCeEEEEeccccccCCHHHHHH
Q 003508 184 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET---FAGRKVMLGVDRLDMIKGIPQKLL 260 (814)
Q Consensus 184 ~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~---~~~~~vil~VgRld~~KGi~~~l~ 260 (814)
. .....++.++|+|+|...+.+.. ...+.. ..+++.|+++||+.+.||+..+++
T Consensus 163 ---~-----------~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~ 219 (374)
T cd03801 163 ---G-----------GVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRLVPRKGVDLLLE 219 (374)
T ss_pred ---C-----------CCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecchhhhcCHHHHHH
Confidence 0 01124788999999988765321 111111 235678999999999999999999
Q ss_pred HHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEE
Q 003508 261 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 340 (814)
Q Consensus 261 Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~ 340 (814)
|+..+.+++|+ +.|+++|. ++. ...+++++.+.+.. ..|. +.|.++.+++..+|+.||++
T Consensus 220 ~~~~~~~~~~~----~~l~i~G~-----~~~----~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~~di~ 279 (374)
T cd03801 220 ALAKLRKEYPD----VRLVIVGD-----GPL----REELEALAAELGLG------DRVT-FLGFVPDEDLPALYAAADVF 279 (374)
T ss_pred HHHHHhhhcCC----eEEEEEeC-----cHH----HHHHHHHHHHhCCC------cceE-EEeccChhhHHHHHHhcCEE
Confidence 99999887765 56777762 232 23334444333211 2355 57899999999999999999
Q ss_pred EECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHh-
Q 003508 341 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF- 417 (814)
Q Consensus 341 v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~- 417 (814)
++||..||+|++++|||+|| .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++ +.++++.++++
T Consensus 280 i~~~~~~~~~~~~~Ea~~~g----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~ 354 (374)
T cd03801 280 VLPSLYEGFGLVLLEAMAAG----LPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDP-ELRRRLGEAARE 354 (374)
T ss_pred EecchhccccchHHHHHHcC----CcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHH
Confidence 99999999999999999994 899999999988888 46899999999999999999999865 45666666666
Q ss_pred HHHHHcCHHHHHHHHHHHH
Q 003508 418 THVTTHTAQEWAETFVSEL 436 (814)
Q Consensus 418 ~~v~~~~~~~W~~~fl~~l 436 (814)
...+.+++..+++.+++.+
T Consensus 355 ~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 355 RVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHhcCHHHHHHHHHHhh
Confidence 4567889999988887644
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.1e-19 Score=196.19 Aligned_cols=272 Identities=24% Similarity=0.200 Sum_probs=191.1
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCc----HHHHHH-HhhccEEeEecHHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR----SDLLRA-VLAADLVGFHTYDYARHFVSA 182 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~----~~il~~-ll~~DlIgf~~~~~~~~fl~~ 182 (814)
..|+|++|.............+..++++.+++|..||..-........ ..+.+. ...+|.+.+.+......+..
T Consensus 83 ~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~- 161 (364)
T cd03814 83 APDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLADELRA- 161 (364)
T ss_pred CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHHHHhc-
Confidence 469999987544322222222334678888899877632111111111 122222 34678888877755442211
Q ss_pred HHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh--CCCeEEEEeccccccCCHHHHHH
Q 003508 183 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQKLL 260 (814)
Q Consensus 183 ~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil~VgRld~~KGi~~~l~ 260 (814)
. ...++.++|+|+|.+.|.+.... ...++.+ .++++|+++||+.+.||+..+++
T Consensus 162 ---------------~--~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~G~~~~~k~~~~~i~ 217 (364)
T cd03814 162 ---------------R--GFRRVRLWPRGVDTELFHPRRRD-------EALRARLGPPDRPVLLYVGRLAPEKNLEALLD 217 (364)
T ss_pred ---------------c--CCCceeecCCCccccccCccccc-------HHHHHHhCCCCCeEEEEEeccccccCHHHHHH
Confidence 0 12356789999999877643211 1112222 35678999999999999999999
Q ss_pred HHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEE
Q 003508 261 AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVA 340 (814)
Q Consensus 261 Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~ 340 (814)
|++++.++ |+ +.|+++|. ++....+ + .. ...|. +.|.++.+++..+|+.||++
T Consensus 218 ~~~~l~~~-~~----~~l~i~G~-----~~~~~~~----~----~~--------~~~v~-~~g~~~~~~~~~~~~~~d~~ 270 (364)
T cd03814 218 ADLPLRRR-PP----VRLVIVGD-----GPARARL----E----AR--------YPNVH-FLGFLDGEELAAAYASADVF 270 (364)
T ss_pred HHHHhhhc-CC----ceEEEEeC-----CchHHHH----h----cc--------CCcEE-EEeccCHHHHHHHHHhCCEE
Confidence 99998776 55 45776763 2221111 1 11 12365 46789999999999999999
Q ss_pred EECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhH
Q 003508 341 LVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 418 (814)
Q Consensus 341 v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~ 418 (814)
++||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|.++++++|.++++++ +++.++..+.++
T Consensus 271 l~~s~~e~~~~~~lEa~a~g----~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~ 345 (364)
T cd03814 271 VFPSRTETFGLVVLEAMASG----LPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADP-ELRRRMAARARA 345 (364)
T ss_pred EECcccccCCcHHHHHHHcC----CCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHH
Confidence 99999999999999999995 899999999988888 36899999999999999999999865 567777788888
Q ss_pred HHHHcCHHHHHHHHHHHH
Q 003508 419 HVTTHTAQEWAETFVSEL 436 (814)
Q Consensus 419 ~v~~~~~~~W~~~fl~~l 436 (814)
.++.+++..+++++++.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 346 EAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHhhcCHHHHHHHHHHhh
Confidence 888899999998887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.5e-20 Score=195.73 Aligned_cols=194 Identities=15% Similarity=0.222 Sum_probs=130.0
Q ss_pred cCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCc--eEEcc
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAE 544 (814)
Q Consensus 467 ~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l--~lia~ 544 (814)
..++|++|+||||++. ...++++++++|++|.+ +|..|+|+|||++..+.+.+..+++ ++|++
T Consensus 2 ~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~~~~-~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~ 66 (264)
T COG0561 2 MIKLLAFDLDGTLLDS--------------NKTISPETKEALARLRE-KGVKVVLATGRPLPDVLSILEELGLDGPLITF 66 (264)
T ss_pred CeeEEEEcCCCCccCC--------------CCccCHHHHHHHHHHHH-CCCEEEEECCCChHHHHHHHHHcCCCccEEEe
Confidence 4689999999999986 34599999999999987 6999999999999999999998854 69999
Q ss_pred CcEEEEeCCCceeecccccCChHHHHHHHHHHHHHhcc--CCCceeeeccceEEE-----------E--e----ccCC--
Q 003508 545 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTER--TPRSHFEQRETSLVW-----------N--Y----KYAD-- 603 (814)
Q Consensus 545 hG~~i~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~--~~g~~iE~K~~~v~~-----------h--y----r~~d-- 603 (814)
||+++...++.. .....+ .+.+..+++..... ....+.......... + + ...+
T Consensus 67 NGa~i~~~~~~i---~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (264)
T COG0561 67 NGALIYNGGELL---FQKPLS---REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAEL 140 (264)
T ss_pred CCeEEecCCcEE---eeecCC---HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhc
Confidence 999998663321 111122 34455555544221 111111111000000 0 0 0000
Q ss_pred h-------hhhHHHHHHHHHHHhcCCCCCCceEEEEcCcE-EEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeC
Q 003508 604 V-------EFGRIQARDMLQHLWTGPISNASVEVVQGSKS-VEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 675 (814)
Q Consensus 604 ~-------e~~~~~a~~l~~~l~~~~~~~~~~~v~~g~~~-vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD 675 (814)
. ........++...+ .+.+....+.+.++... +||.|+|+|||.|++.|+++++ ++.+.+++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lg------i~~~~v~afGD 213 (264)
T COG0561 141 EDNKIIALDKDHEILEELVEAL-RKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLG------IKLEEVIAFGD 213 (264)
T ss_pred CcceEEEEecChHhHHHHHHHH-hhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhC------CCHHHeEEeCC
Confidence 0 00011223333344 33333334566666554 9999999999999999999998 56789999999
Q ss_pred CCCCcHHHHHhccC
Q 003508 676 FLGKDEDVYAFFEP 689 (814)
Q Consensus 676 ~d~nDe~mf~~~~~ 689 (814)
+.||.+||+.++.
T Consensus 214 -~~ND~~Ml~~ag~ 226 (264)
T COG0561 214 -STNDIEMLEVAGL 226 (264)
T ss_pred -ccccHHHHHhcCe
Confidence 9999999999976
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.9e-19 Score=193.03 Aligned_cols=281 Identities=22% Similarity=0.218 Sum_probs=193.9
Q ss_pred CCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHH-HHHhhccEEeEecHHHHHHHHHHHHH
Q 003508 107 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-RAVLAADLVGFHTYDYARHFVSACTR 185 (814)
Q Consensus 107 ~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il-~~ll~~DlIgf~~~~~~~~fl~~~~~ 185 (814)
...|+|++|......+......+..+.++.+..|.+++.... .......+. ..+..+|.+.+.+......+.+..
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~--~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~-- 167 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLP--RKRLLRALLRRALRRADAVIAVSEALADELKALG-- 167 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccC--chhhHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc--
Confidence 356999999655444333333333457888888877643211 111122333 345578999988876665554310
Q ss_pred HhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHHHHHHH
Q 003508 186 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 265 (814)
Q Consensus 186 ~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~Af~~l 265 (814)
....++.++|+|+|...+.+... .....+ ....++++|+++||+.+.||+..+++|++.+
T Consensus 168 --------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~ 227 (377)
T cd03798 168 --------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALARL 227 (377)
T ss_pred --------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHHHHHHHH
Confidence 12356889999999887764321 011111 1124678899999999999999999999999
Q ss_pred HHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCC
Q 003508 266 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 345 (814)
Q Consensus 266 l~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~ 345 (814)
.+++|+ +.|+++|.+ +.. +.+++++...+.. ..|. +.|.++.+++..+|+.||++++||.
T Consensus 228 ~~~~~~----~~l~i~g~~-----~~~----~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~ad~~i~~~~ 287 (377)
T cd03798 228 LKKRPD----VHLVIVGDG-----PLR----EALEALAAELGLE------DRVT-FLGAVPHEEVPAYYAAADVFVLPSL 287 (377)
T ss_pred HhcCCC----eEEEEEcCC-----cch----HHHHHHHHhcCCc------ceEE-EeCCCCHHHHHHHHHhcCeeecchh
Confidence 877665 557766532 222 2233444333211 1244 5789999999999999999999999
Q ss_pred CccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHh-HHHHH
Q 003508 346 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF-THVTT 422 (814)
Q Consensus 346 ~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~-~~v~~ 422 (814)
.||+|++++|||+|| .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++.. ++..+.+ ...+.
T Consensus 288 ~~~~~~~~~Ea~~~G----~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~---~~~~~~~~~~~~~ 360 (377)
T cd03798 288 REGFGLVLLEAMACG----LPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPWL---RLGRAARRRVAER 360 (377)
T ss_pred hccCChHHHHHHhcC----CCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcHH---HHhHHHHHHHHHH
Confidence 999999999999995 899999999988877 4567999999999999999999998753 4444444 44667
Q ss_pred cCHHHHHHHHHHHHHH
Q 003508 423 HTAQEWAETFVSELND 438 (814)
Q Consensus 423 ~~~~~W~~~fl~~l~~ 438 (814)
+++..+++++.+.+++
T Consensus 361 ~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 361 FSWENVAERLLELYRE 376 (377)
T ss_pred hhHHHHHHHHHHHHhh
Confidence 7888888888776653
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.3e-20 Score=195.80 Aligned_cols=191 Identities=15% Similarity=0.195 Sum_probs=124.1
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC--ceEEccC
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 545 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~--l~lia~h 545 (814)
.||||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+.+++..++ .++|+.|
T Consensus 2 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (272)
T PRK15126 2 ARLAAFDMDGTLLMP--------------DHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGN 66 (272)
T ss_pred ccEEEEeCCCcCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecC
Confidence 479999999999975 34689999999999998 699999999999999999888774 4689999
Q ss_pred cEEEEe-CCCc-eeecccccCChHHHHHHHHHHHHHhccC--------CCceeeeccce-------EEEEeccCCh----
Q 003508 546 GMFLRC-TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQRETS-------LVWNYKYADV---- 604 (814)
Q Consensus 546 G~~i~~-~~~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~--------~g~~iE~K~~~-------v~~hyr~~d~---- 604 (814)
|+.+.. .++. +... .. .+.+.++++...... .+.+....... ..+.+...+.
T Consensus 67 Ga~I~~~~~~~l~~~~----i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (272)
T PRK15126 67 GTRVHSLEGELLHRQD----LP---ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLP 139 (272)
T ss_pred CcEEEcCCCCEEEeec----CC---HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHcc
Confidence 999984 3322 2211 22 234444444322110 01110000000 0000000000
Q ss_pred --hh-------hHHHHHHHHHHHhcCCCCCCceEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEe
Q 003508 605 --EF-------GRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 674 (814)
Q Consensus 605 --e~-------~~~~a~~l~~~l~~~~~~~~~~~v~-~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iG 674 (814)
.. ......++...+ .+.+. ..+.+. ++..++||.|+++|||.||++|++++| ++.+.+++||
T Consensus 140 ~~~~~ki~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~g------i~~~~v~afG 211 (272)
T PRK15126 140 AHGVTKICFCGDHDDLTRLQIQL-NEALG-ERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLG------LSLADCMAFG 211 (272)
T ss_pred ccCceEEEEECCHHHHHHHHHHH-HHHhc-CCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhC------CCHHHeEEec
Confidence 00 001123333334 22222 124443 456799999999999999999999998 5789999999
Q ss_pred CCCCCcHHHHHhccC
Q 003508 675 HFLGKDEDVYAFFEP 689 (814)
Q Consensus 675 D~d~nDe~mf~~~~~ 689 (814)
| +.||.+||+.++.
T Consensus 212 D-~~NDi~Ml~~ag~ 225 (272)
T PRK15126 212 D-AMNDREMLGSVGR 225 (272)
T ss_pred C-CHHHHHHHHHcCC
Confidence 9 9999999999854
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-19 Score=200.98 Aligned_cols=184 Identities=13% Similarity=0.041 Sum_probs=133.6
Q ss_pred eecccChhhhhhhhcCCchHHHHHHHHHHh-CC---CeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEec
Q 003508 208 FPIGIDSERFIRALEINPVQVHIKELQETF-AG---RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAV 283 (814)
Q Consensus 208 ~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~---~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~ 283 (814)
.+.|||++.|.+.... +++.+ ++ .+++++||||.+.||+..+|+|++++.+..|++ .|+++|
T Consensus 201 ~v~GVd~~~f~~~~~~---------~~~~~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~----~l~ivG- 266 (462)
T PLN02846 201 NVHGVNPKFLEIGKLK---------LEQQKNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGL----EVDLYG- 266 (462)
T ss_pred cCceechhhcCCCccc---------HhhhcCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCe----EEEEEC-
Confidence 3589999988754221 11122 22 346899999999999999999999988877764 477665
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCC
Q 003508 284 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 363 (814)
Q Consensus 284 p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~ 363 (814)
+||+. +++++++.+++. .+++|.|..+.+ .+|..+||||+||.+||||+|++|||||+
T Consensus 267 ----dGp~~----~~L~~~a~~l~l--------~~~vf~G~~~~~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~G--- 324 (462)
T PLN02846 267 ----SGEDS----DEVKAAAEKLEL--------DVRVYPGRDHAD---PLFHDYKVFLNPSTTDVVCTTTAEALAMG--- 324 (462)
T ss_pred ----CCccH----HHHHHHHHhcCC--------cEEEECCCCCHH---HHHHhCCEEEECCCcccchHHHHHHHHcC---
Confidence 45554 345556655431 244467765544 68999999999999999999999999994
Q ss_pred CceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHH
Q 003508 364 KGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 437 (814)
Q Consensus 364 ~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 437 (814)
.|+|+++..| .+.+ +.+|+++ .|.++++++|.++|..+++++.. +. .+.++|..-.++|+..+.
T Consensus 325 -~PVVa~~~~~-~~~v~~~~ng~~~--~~~~~~a~ai~~~l~~~~~~~~~---~a---~~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 325 -KIVVCANHPS-NEFFKQFPNCRTY--DDGKGFVRATLKALAEEPAPLTD---AQ---RHELSWEAATERFLRVAD 390 (462)
T ss_pred -CcEEEecCCC-cceeecCCceEec--CCHHHHHHHHHHHHccCchhHHH---HH---HHhCCHHHHHHHHHHHhc
Confidence 7888888876 5767 6788887 48999999999999865433211 11 247788887887776554
|
|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.4e-19 Score=193.28 Aligned_cols=262 Identities=17% Similarity=0.085 Sum_probs=181.7
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccEEeEecHHHHHHHHHHHHHHh
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 187 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~DlIgf~~~~~~~~fl~~~~~~l 187 (814)
+.|+|++|+.+...+...+.... .++.+..|..++...... .+.......+..+|.+.+.+...... ..
T Consensus 83 ~~d~i~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~-------~~ 151 (348)
T cd03820 83 KPDVVISFLTSLLTFLASLGLKI--VKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRAL-------YY 151 (348)
T ss_pred CCCEEEEcCchHHHHHHHHhhcc--ccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHH-------hh
Confidence 56999999887222222222211 477788887654321110 00001223355688888887654311 00
Q ss_pred CcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHHHHHHHHH
Q 003508 188 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 267 (814)
Q Consensus 188 ~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~Af~~ll~ 267 (814)
.....++.++|+|++...+... ...++++++++||+.+.||++.+++|++.+.+
T Consensus 152 -----------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~ 205 (348)
T cd03820 152 -----------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAK 205 (348)
T ss_pred -----------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHHh
Confidence 1123468889999998765422 12357789999999999999999999999988
Q ss_pred hCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCc
Q 003508 268 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 347 (814)
Q Consensus 268 ~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~E 347 (814)
..|+ +.|+++|.+ +.. ..+++++.+.+.. ..|. +.|. .+++..+|+.||++++||..|
T Consensus 206 ~~~~----~~l~i~G~~-----~~~----~~~~~~~~~~~~~------~~v~-~~g~--~~~~~~~~~~ad~~i~ps~~e 263 (348)
T cd03820 206 KHPD----WKLRIVGDG-----PER----EALEALIKELGLE------DRVI-LLGF--TKNIEEYYAKASIFVLTSRFE 263 (348)
T ss_pred cCCC----eEEEEEeCC-----CCH----HHHHHHHHHcCCC------CeEE-EcCC--cchHHHHHHhCCEEEeCcccc
Confidence 7776 457766642 222 2233444444321 1244 5565 689999999999999999999
Q ss_pred cCChhHHHHhhhccCCCceEEEeCCCCccccc---CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHcC
Q 003508 348 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 424 (814)
Q Consensus 348 G~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l---g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~ 424 (814)
|||++++|||+|+ .|+|+|+..|..+.+ +.+|+++++.|+++++++|.++++++ +.+.++.+++++.++.++
T Consensus 264 ~~~~~~~Ea~a~G----~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~ 338 (348)
T cd03820 264 GFPMVLLEAMAFG----LPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDE-ELRKRMGANARESAERFS 338 (348)
T ss_pred ccCHHHHHHHHcC----CCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhC
Confidence 9999999999994 899999876655544 34899999999999999999999864 466677777788889999
Q ss_pred HHHHHHHHH
Q 003508 425 AQEWAETFV 433 (814)
Q Consensus 425 ~~~W~~~fl 433 (814)
+..++++|.
T Consensus 339 ~~~~~~~~~ 347 (348)
T cd03820 339 IENIIKQWE 347 (348)
T ss_pred HHHHHHHhc
Confidence 988887764
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-19 Score=195.35 Aligned_cols=213 Identities=13% Similarity=0.078 Sum_probs=153.1
Q ss_pred hccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEE
Q 003508 164 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVM 243 (814)
Q Consensus 164 ~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vi 243 (814)
.+|.|...+......+.. .+.. ...++.++|+|||++.|.+... ...++.++
T Consensus 94 ~ad~ii~~S~~~~~~l~~-----~g~~----------~~~~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl 145 (331)
T PHA01630 94 PVDEIVVPSQWSKNAFYT-----SGLK----------IPQPIYVIPHNLNPRMFEYKPK-------------EKPHPCVL 145 (331)
T ss_pred cCCEEEECCHHHHHHHHH-----cCCC----------CCCCEEEECCCCCHHHcCCCcc-------------ccCCCEEE
Confidence 478888888765544432 1110 1236788999999988864311 01244566
Q ss_pred EEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecC
Q 003508 244 LGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR 323 (814)
Q Consensus 244 l~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g 323 (814)
++++|+.+.||++.+|+|++.+.+++|+ +.|+++|. ++. +. + +. +. .. +.+
T Consensus 146 ~~~g~~~~~Kg~d~Li~A~~~l~~~~~~----~~llivG~-----~~~--~~--~---l~-------~~---~~---~~~ 196 (331)
T PHA01630 146 AILPHSWDRKGGDIVVKIFHELQNEGYD----FYFLIKSS-----NML--DP--R---LF-------GL---NG---VKT 196 (331)
T ss_pred EEeccccccCCHHHHHHHHHHHHhhCCC----EEEEEEeC-----ccc--ch--h---hc-------cc---cc---eec
Confidence 6788999999999999999999887765 55777762 111 11 1 10 10 11 235
Q ss_pred CCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECC-------------
Q 003508 324 SLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP------------- 388 (814)
Q Consensus 324 ~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP------------- 388 (814)
.++.+++..+|+.||+||+||..||||++++|||||+ .|+|+|+.+|..+.+ |.+|++|++
T Consensus 197 ~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G----~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~ 272 (331)
T PHA01630 197 PLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALG----LDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIH 272 (331)
T ss_pred cCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcC----CCEEEeCCCCchhhccCCCceEEeeecccccccccCCcc
Confidence 6889999999999999999999999999999999995 899999998888877 456666532
Q ss_pred ------CCHHHHHHHHHHHhcCC-HHHHHHHH-HHHhHHHHHcCHHHHHHHHHHHHH
Q 003508 389 ------WNITEVANAIARALNMS-PEEREKRH-WHNFTHVTTHTAQEWAETFVSELN 437 (814)
Q Consensus 389 ------~d~~~lA~ai~~~L~~~-~~er~~r~-~~~~~~v~~~~~~~W~~~fl~~l~ 437 (814)
.|.++++++|.++|.++ ++++++++ .......+++++...++++++.++
T Consensus 273 ~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 273 VGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred cccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 27889999999999874 23444444 445566889999999999988775
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-19 Score=193.40 Aligned_cols=186 Identities=16% Similarity=0.188 Sum_probs=125.3
Q ss_pred cCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCc---eEEc
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL---WLAA 543 (814)
Q Consensus 467 ~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l---~lia 543 (814)
..++||+|+||||++. ...+++.++++|++|.+ .|+.|+|+|||+...+.+++..+++ ++|+
T Consensus 6 ~~~lI~~DlDGTLL~~--------------~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~ 70 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS--------------HTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIA 70 (271)
T ss_pred CCeEEEEeCccCCcCC--------------CCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEE
Confidence 5789999999999975 34578899999999998 6999999999999999999888753 5999
Q ss_pred cCcEEEEeCCC-c----eeecccccCChHHHHHHHHHHHHHhccCCCceee--e-----------------------ccc
Q 003508 544 ENGMFLRCTTG-K----WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFE--Q-----------------------RET 593 (814)
Q Consensus 544 ~hG~~i~~~~~-~----~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~~iE--~-----------------------K~~ 593 (814)
+||+.+...+. . +. ......+ .+.+.++++.+.+. .+..+. . ...
T Consensus 71 ~NGa~I~~~~~~~~~~~~~-~~~~~l~---~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (271)
T PRK03669 71 ENGAVIQLDEQWQDHPDFP-RIISGIS---HGEIRQVLNTLREK-EGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEA 145 (271)
T ss_pred eCCCEEEecCcccCCCCce-EeecCCC---HHHHHHHHHHHHHh-cCCceeecccCCHHHHHHHhCCCHHHHHHHhcccc
Confidence 99999985321 1 10 1001112 23444555443321 011100 0 000
Q ss_pred eEEEEeccCChhhhHHHHHHHHHHHhcCCCCCCceEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCC---CCceE
Q 003508 594 SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKT---AIDYV 670 (814)
Q Consensus 594 ~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~~~~~~v~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~---~~d~v 670 (814)
...+.+.. ++ ....++.+.+ .. ..+.+..+..++||.|+++|||.|+++|+++++ + +.+.+
T Consensus 146 ~~~~~~~~-~~----~~~~~~~~~l-~~----~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~lg------i~~~~~~~v 209 (271)
T PRK03669 146 SVTLIWRD-SD----ERMAQFTARL-AE----LGLQFVQGARFWHVLDASAGKDQAANWLIATYQ------QLSGTRPTT 209 (271)
T ss_pred CceeEecC-CH----HHHHHHHHHH-HH----CCCEEEecCeeEEEecCCCCHHHHHHHHHHHHH------hhcCCCceE
Confidence 01111110 11 1223344444 32 135555566789999999999999999999998 5 68999
Q ss_pred EEEeCCCCCcHHHHHhccC
Q 003508 671 LCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 671 l~iGD~d~nDe~mf~~~~~ 689 (814)
++||| +.||.+||+.++.
T Consensus 210 iafGD-s~NDi~Ml~~ag~ 227 (271)
T PRK03669 210 LGLGD-GPNDAPLLDVMDY 227 (271)
T ss_pred EEEcC-CHHHHHHHHhCCE
Confidence 99999 9999999999864
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-18 Score=198.23 Aligned_cols=280 Identities=10% Similarity=0.001 Sum_probs=182.4
Q ss_pred CCCCEEEEeCccch--h-HHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcH------HHHH-HH-hhccEEeEecHHH
Q 003508 107 KDGDVVWCHDYHLM--F-LPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS------DLLR-AV-LAADLVGFHTYDY 175 (814)
Q Consensus 107 ~~~DiI~ihdyhl~--l-lp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~------~il~-~l-l~~DlIgf~~~~~ 175 (814)
+..|+|++|..... . ++.++++ ..+.|+++.+|--+++..-. ..+... ..++ .+ ..+|.|...+...
T Consensus 94 ~~~Dvi~~~~~~~~~~~~~a~~~~~-~~~~~~V~~~h~~~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~ 171 (415)
T cd03816 94 RPADYILIQNPPSIPTLLIAWLYCL-LRRTKLIIDWHNYGYTILAL-KLGENHPLVRLAKWYEKLFGRLADYNLCVTKAM 171 (415)
T ss_pred CCCCEEEEeCCCCchHHHHHHHHHH-HhCCeEEEEcCCchHHHHhc-ccCCCCHHHHHHHHHHHHHhhcCCEeeecCHHH
Confidence 35799999985542 2 2333343 34688888888644321100 011000 1111 22 2478888777654
Q ss_pred HHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHH---------------H--hC
Q 003508 176 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE---------------T--FA 238 (814)
Q Consensus 176 ~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~---------------~--~~ 238 (814)
.+.+.+ .+. ...+|.++|+| +.+.|.+.... .....+++ . -+
T Consensus 172 ~~~l~~-----~~~-----------~~~ki~vI~Ng-~~~~f~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (415)
T cd03816 172 KEDLQQ-----FNN-----------WKIRATVLYDR-PPEQFRPLPLE----EKHELFLKLAKTFLTRELRIGAVQLSEE 230 (415)
T ss_pred HHHHHh-----hhc-----------cCCCeeecCCC-CHHHceeCcHH----HHHHHHHhccccccccccccccceecCC
Confidence 333321 121 24578899999 55667654211 11111111 0 12
Q ss_pred CCeEEEEeccccccCCHHHHHHHHHHHHHhCccc--cCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003508 239 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDW--RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 316 (814)
Q Consensus 239 ~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~--~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~ 316 (814)
+..+++++||+.+.||+..+|+|++.+.+..++. ..++.|+++|. ++. ++++++++++.+. .
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~-----G~~----~~~l~~~~~~~~l-------~ 294 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGK-----GPL----KEKYLERIKELKL-------K 294 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEec-----Ccc----HHHHHHHHHHcCC-------C
Confidence 3467889999999999999999999987532110 11366887774 332 3455556555432 3
Q ss_pred cEEEecCCCCHHHHHHHHHhccEEEECC---CCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCH
Q 003508 317 PIHHLDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNI 391 (814)
Q Consensus 317 ~V~~~~g~v~~~el~aly~~ADv~v~~S---~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~ 391 (814)
.++++.|+++.++++.+|+.||++|+++ ..+||+++++|||||+ .|+|+|+.+|..+.+ |.+|++|+ |+
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G----~PVI~s~~~~~~eiv~~~~~G~lv~--d~ 368 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCALDFKCIDELVKHGENGLVFG--DS 368 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcC----CCEEEeCCCCHHHHhcCCCCEEEEC--CH
Confidence 4777888999999999999999999743 3588999999999994 899999999988888 67899994 99
Q ss_pred HHHHHHHHHHhcCC--HHHHHHHHHHHhHHHHHcCHHHHHHHHHHH
Q 003508 392 TEVANAIARALNMS--PEEREKRHWHNFTHVTTHTAQEWAETFVSE 435 (814)
Q Consensus 392 ~~lA~ai~~~L~~~--~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 435 (814)
+++|++|.++++++ ++++.++..++++..+ .+|...+.+.
T Consensus 369 ~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~~~ 410 (415)
T cd03816 369 EELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWDRV 410 (415)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHHHH
Confidence 99999999999972 6677777777777764 4555555443
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-19 Score=193.22 Aligned_cols=192 Identities=16% Similarity=0.256 Sum_probs=123.9
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC--ceEEccC
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 545 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~--l~lia~h 545 (814)
.|+|++|+||||++. +..++++++++|++|.+ +|+.|+|+|||+...+.+++..++ .++|++|
T Consensus 2 ikli~~DlDGTLl~~--------------~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 66 (266)
T PRK10976 2 YQVVASDLDGTLLSP--------------DHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSN 66 (266)
T ss_pred ceEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcC
Confidence 479999999999976 34689999999999998 699999999999999998888774 4689999
Q ss_pred cEEEEeCCCceeecccccCChHHHHHHHHHHHHHhccCCCc--eeeeccceEE-----------------EEec---cCC
Q 003508 546 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRS--HFEQRETSLV-----------------WNYK---YAD 603 (814)
Q Consensus 546 G~~i~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~--~iE~K~~~v~-----------------~hyr---~~d 603 (814)
|+.+...++.. +.....+ .+.+.++++...+ .++. .+...+.... +... ...
T Consensus 67 Ga~i~~~~~~~--i~~~~l~---~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (266)
T PRK10976 67 GARVHDTDGNL--IFSHNLD---RDIASDLFGVVHD-NPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLE 140 (266)
T ss_pred CcEEECCCCCE--ehhhcCC---HHHHHHHHHhhcc-cCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcc
Confidence 99998532221 1101122 2344555543321 1111 1111000000 0000 000
Q ss_pred hh-h--------hHHHHHHHHHHHhcCCCCCCceEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEE
Q 003508 604 VE-F--------GRIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCI 673 (814)
Q Consensus 604 ~e-~--------~~~~a~~l~~~l~~~~~~~~~~~v-~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~i 673 (814)
++ . ......++...+ .+.+. ..+.+ ..+..++||.|+++|||.||++|+++++ ++.+.+++|
T Consensus 141 ~~~i~ki~~~~~~~~~~~~~~~~l-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lg------i~~~~viaf 212 (266)
T PRK10976 141 PDGVSKVFFTCDSHEKLLPLEQAI-NARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLG------YSLKDCIAF 212 (266)
T ss_pred cCCceEEEEEcCCHHHHHHHHHHH-HHHhC-CcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcC------CCHHHeEEE
Confidence 00 0 001112233333 22111 12444 3566799999999999999999999998 678999999
Q ss_pred eCCCCCcHHHHHhccC
Q 003508 674 GHFLGKDEDVYAFFEP 689 (814)
Q Consensus 674 GD~d~nDe~mf~~~~~ 689 (814)
|| +.||.+||+.++.
T Consensus 213 GD-~~NDi~Ml~~ag~ 227 (266)
T PRK10976 213 GD-GMNDAEMLSMAGK 227 (266)
T ss_pred cC-CcccHHHHHHcCC
Confidence 99 9999999999854
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-19 Score=187.39 Aligned_cols=182 Identities=12% Similarity=0.192 Sum_probs=120.6
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC--ceEEccC
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 545 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~--l~lia~h 545 (814)
.|+||+|+||||++. +..+++++.++|++|++ .|+.|+|+|||+...+.+++..++ .++|++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~n 67 (230)
T PRK01158 3 IKAIAIDIDGTITDK--------------DRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAEN 67 (230)
T ss_pred eeEEEEecCCCcCCC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEec
Confidence 489999999999975 34689999999999997 699999999999999988877764 4699999
Q ss_pred cEEEEeC--CCceeecccccCChHHHHHHHHHHHHHhccCCCc--eeee--ccc--eEEEEeccCChhhhHHHHHHHHHH
Q 003508 546 GMFLRCT--TGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRS--HFEQ--RET--SLVWNYKYADVEFGRIQARDMLQH 617 (814)
Q Consensus 546 G~~i~~~--~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~--~iE~--K~~--~v~~hyr~~d~e~~~~~a~~l~~~ 617 (814)
|+.+... +..+... ... .+.++++.+.+..+.. .+.. ... .....++..+ ..++.+.
T Consensus 68 Ga~i~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 132 (230)
T PRK01158 68 GGVISVGFDGKRIFLG---DIE-----ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVP-------VEEVREL 132 (230)
T ss_pred CeEEEEcCCCCEEEEc---chH-----HHHHHHHHHHHhccccceeeecCCcccccceeeeccccc-------HHHHHHH
Confidence 9998753 2222111 111 1223333222222211 1110 000 0011111111 1222223
Q ss_pred HhcCCCCCCceEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 618 LWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 618 l~~~~~~~~~~~v~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
+ +.. ...+.+..+...+||.|+++|||.|+++++++++ ++++.+++||| +.||++||+.++.
T Consensus 133 l-~~~--~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~ 194 (230)
T PRK01158 133 L-EEL--GLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG------IDPEEVAAIGD-SENDLEMFEVAGF 194 (230)
T ss_pred H-HHc--CCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEECC-chhhHHHHHhcCc
Confidence 3 222 1235556666789999999999999999999988 56889999999 9999999998853
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-18 Score=188.80 Aligned_cols=257 Identities=19% Similarity=0.200 Sum_probs=176.1
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccEEeEecHHHHHHHHHHHHHHh
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 187 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~DlIgf~~~~~~~~fl~~~~~~l 187 (814)
..|+|++|.+..+..+.+...+..++++.+++|-.++.. +....+. ...|.+...+....+.|.. .
T Consensus 96 ~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------~~~~~~~---~~~d~ii~~s~~~~~~~~~----~- 161 (359)
T cd03823 96 RPDVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------PRQGLFK---KGGDAVIAPSRFLLDRYVA----N- 161 (359)
T ss_pred CCCEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec------chhhhhc---cCCCEEEEeCHHHHHHHHH----c-
Confidence 459999998755544333222234588899898654321 1111111 1128888777655444432 1
Q ss_pred CcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHHHHHHHHH
Q 003508 188 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 267 (814)
Q Consensus 188 ~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~Af~~ll~ 267 (814)
+ ....++.++|+|+|...+.+... ....++.+|+++||+.+.||+..+++|+..+.+
T Consensus 162 ~-----------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~ 218 (359)
T cd03823 162 G-----------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR 218 (359)
T ss_pred C-----------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCHHHHHHHHHHHHh
Confidence 1 11357889999999987653211 012456789999999999999999999998865
Q ss_pred hCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCC-C
Q 003508 268 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 346 (814)
Q Consensus 268 ~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~-~ 346 (814)
++ +.|+++|... ....... .. .. ...|. +.|.++.+++..+|+.||++++||. .
T Consensus 219 --~~----~~l~i~G~~~-----~~~~~~~----~~-~~--------~~~v~-~~g~~~~~~~~~~~~~ad~~i~ps~~~ 273 (359)
T cd03823 219 --GD----IELVIVGNGL-----ELEEESY----EL-EG--------DPRVE-FLGAYPQEEIDDFYAEIDVLVVPSIWP 273 (359)
T ss_pred --cC----cEEEEEcCch-----hhhHHHH----hh-cC--------CCeEE-EeCCCCHHHHHHHHHhCCEEEEcCccc
Confidence 43 5677776432 1111111 11 11 12355 5789999999999999999999997 7
Q ss_pred ccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHcC
Q 003508 347 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 424 (814)
Q Consensus 347 EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~ 424 (814)
||||++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++ +.++.+..+.++.+..
T Consensus 274 e~~~~~~~Ea~a~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 274 ENFPLVIREALAAG----VPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDP-DLLERLRAGIEPPRSI-- 346 (359)
T ss_pred CCCChHHHHHHHCC----CCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhCh-HHHHHHHHhHHHhhhH--
Confidence 99999999999995 899999999988888 34799999999999999999999854 4666666666666543
Q ss_pred HHHHHHHHHH
Q 003508 425 AQEWAETFVS 434 (814)
Q Consensus 425 ~~~W~~~fl~ 434 (814)
..+++++++
T Consensus 347 -~~~~~~~~~ 355 (359)
T cd03823 347 -EDQAEEYLK 355 (359)
T ss_pred -HHHHHHHHH
Confidence 455555544
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.8e-19 Score=189.59 Aligned_cols=191 Identities=16% Similarity=0.231 Sum_probs=122.4
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCc-----eEE
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL-----WLA 542 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l-----~li 542 (814)
.|+||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+.+.+..+++ ++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I 67 (270)
T PRK10513 3 IKLIAIDMDGTLLLP--------------DHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCI 67 (270)
T ss_pred eEEEEEecCCcCcCC--------------CCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeEE
Confidence 589999999999975 34689999999999998 6999999999999999988887743 589
Q ss_pred ccCcEEEEe--CCCc-eeecccccCChHHHHHHHHHHHHHhccC--------CCceeeeccce-----------EEEEec
Q 003508 543 AENGMFLRC--TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERT--------PRSHFEQRETS-----------LVWNYK 600 (814)
Q Consensus 543 a~hG~~i~~--~~~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~--------~g~~iE~K~~~-----------v~~hyr 600 (814)
+.||+.+.. .++. +... ... +.+..+++...... .+.+...+... +...+.
T Consensus 68 ~~NGa~i~~~~~~~~i~~~~----l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (270)
T PRK10513 68 TNNGALVQKAADGETVAQTA----LSY---DDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFR 140 (270)
T ss_pred EcCCeEEEECCCCCEEEecC----CCH---HHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCcccc
Confidence 999999974 2322 2221 222 23333333222110 11111111100 000000
Q ss_pred cC---Chh--h------h-HHHHHHHHHHHhcCCCCCCceEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCC
Q 003508 601 YA---DVE--F------G-RIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI 667 (814)
Q Consensus 601 ~~---d~e--~------~-~~~a~~l~~~l~~~~~~~~~~~v-~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~ 667 (814)
.. .+. . . .....++...+ ...+. ..+.+ .++..++||.|+|+|||.|+++|+++++ ++.
T Consensus 141 ~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~g------i~~ 212 (270)
T PRK10513 141 EVEKMDPNLQFPKVMMIDEPEILDAAIARI-PAEVK-ERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLG------IKP 212 (270)
T ss_pred chhhccccCCceEEEEeCCHHHHHHHHHHh-HHHhc-CcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhC------CCH
Confidence 00 000 0 0 01112233333 22111 13444 4567799999999999999999999998 578
Q ss_pred ceEEEEeCCCCCcHHHHHhccC
Q 003508 668 DYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 668 d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
+.+++||| +.||.+||+.++.
T Consensus 213 ~~v~afGD-~~NDi~Ml~~ag~ 233 (270)
T PRK10513 213 EEVMAIGD-QENDIAMIEYAGV 233 (270)
T ss_pred HHEEEECC-chhhHHHHHhCCc
Confidence 99999999 9999999999853
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.3e-18 Score=189.88 Aligned_cols=262 Identities=22% Similarity=0.208 Sum_probs=179.4
Q ss_pred CCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHH-HHHhhccEEeEecHHHHHHHHHHHHH
Q 003508 107 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-RAVLAADLVGFHTYDYARHFVSACTR 185 (814)
Q Consensus 107 ~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il-~~ll~~DlIgf~~~~~~~~fl~~~~~ 185 (814)
.+.|+|++|+...+.....+... .+.+..+++|........+. .....+. ..+..+|.|.+.+..+.+.+..
T Consensus 82 ~~~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~---- 154 (357)
T cd03795 82 KKADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV---- 154 (357)
T ss_pred CCCCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH----
Confidence 46799999986554322222222 45677788886432111111 1111222 2456789988877765544321
Q ss_pred HhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHHHHHHH
Q 003508 186 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 265 (814)
Q Consensus 186 ~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~Af~~l 265 (814)
.. ....++.++|+|+|...|.+... .. ........++++|+++||+.+.||+..+++|++++
T Consensus 155 ~~------------~~~~~~~~i~~gi~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l 216 (357)
T cd03795 155 LR------------RFRDKVRVIPLGLDPARYPRPDA-----LE-EAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAAAL 216 (357)
T ss_pred hc------------CCccceEEecCCCChhhcCCcch-----hh-hHhhcCCCCCcEEEEecccccccCHHHHHHHHHhc
Confidence 11 11246788999999987764311 00 01111124678999999999999999999999887
Q ss_pred HHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCC
Q 003508 266 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 345 (814)
Q Consensus 266 l~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~ 345 (814)
. ++.|+++|. ++. ..++++++.+.+. . ..|+ +.|.++++++..+|+.||++++||.
T Consensus 217 ~--------~~~l~i~G~-----g~~----~~~~~~~~~~~~~----~--~~V~-~~g~v~~~~~~~~~~~ad~~i~ps~ 272 (357)
T cd03795 217 P--------DAPLVIVGE-----GPL----EAELEALAAALGL----L--DRVR-FLGRLDDEEKAALLAACDVFVFPSV 272 (357)
T ss_pred c--------CcEEEEEeC-----Chh----HHHHHHHHHhcCC----c--ceEE-EcCCCCHHHHHHHHHhCCEEEeCCc
Confidence 4 366777764 222 2334444433321 1 2365 5799999999999999999999996
Q ss_pred --CccCChhHHHHhhhccCCCceEEEeCCCCccccc---CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHH
Q 003508 346 --RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 420 (814)
Q Consensus 346 --~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l---g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v 420 (814)
.||||++++|||+|+ .|+|+|+.+|..+.+ +.+|++++|.|+++++++|.++++++ ++++++..++++.+
T Consensus 273 ~~~e~~g~~~~Ea~~~g----~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~ 347 (357)
T cd03795 273 ERSEAFGIVLLEAMAFG----KPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDP-ELRERLGEAARERA 347 (357)
T ss_pred ccccccchHHHHHHHcC----CCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHH
Confidence 599999999999994 899999989888766 56899999999999999999999865 57777778888876
Q ss_pred HH
Q 003508 421 TT 422 (814)
Q Consensus 421 ~~ 422 (814)
.+
T Consensus 348 ~~ 349 (357)
T cd03795 348 EE 349 (357)
T ss_pred HH
Confidence 54
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.2e-19 Score=203.16 Aligned_cols=262 Identities=12% Similarity=0.115 Sum_probs=161.0
Q ss_pred CCCEEEEeCccchh-H--HHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccEEeEecHHHHHHHHHH--
Q 003508 108 DGDVVWCHDYHLMF-L--PKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSA-- 182 (814)
Q Consensus 108 ~~DiI~ihdyhl~l-l--p~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~DlIgf~~~~~~~~fl~~-- 182 (814)
++||||++..-.+. . +..+.+++ + +++..+||.|+. +++.... ..+..++ ..++.+|+..
T Consensus 434 ~PDVVHLatP~~LGw~~~Glr~ArKl-~-PVVasyHTny~e--Yl~~y~~--g~L~~~l---------lk~l~~~v~r~h 498 (794)
T PLN02501 434 DADIAILEEPEHLNWYHHGKRWTDKF-N-HVVGVVHTNYLE--YIKREKN--GALQAFF---------VKHINNWVTRAY 498 (794)
T ss_pred CCCEEEECCchhhccHHHHHHHHHHc-C-CeEEEEeCCcHH--HHhHhcc--hhHHHHH---------HHHHHHHHHHhh
Confidence 56999999854443 3 22333333 2 688889999974 4433211 1111110 0111222221
Q ss_pred HHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhC---CCeEEEEeccccccCCHHHHH
Q 003508 183 CTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKL 259 (814)
Q Consensus 183 ~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~---~~~vil~VgRld~~KGi~~~l 259 (814)
|+.++.++.... +.. ...|.. .+|||++.|.+.... ... +.++ ..+.+++||||.+.||+..+|
T Consensus 499 cD~VIaPS~atq--~L~--~~vI~n-VnGVDte~F~P~~r~-------~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LL 565 (794)
T PLN02501 499 CHKVLRLSAATQ--DLP--KSVICN-VHGVNPKFLKIGEKV-------AEE-RELGQQAFSKGAYFLGKMVWAKGYRELI 565 (794)
T ss_pred CCEEEcCCHHHH--Hhc--ccceee-cccccccccCCcchh-------HHH-HhcCCccccCceEEEEcccccCCHHHHH
Confidence 333333221000 011 111111 259999998864221 111 1222 224589999999999999999
Q ss_pred HHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccE
Q 003508 260 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 339 (814)
Q Consensus 260 ~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv 339 (814)
+|++.+.++.|+ +.|+++| +||. ++++++++.+++. .|.| .|..+ +...+|+.+||
T Consensus 566 eAla~L~~~~pn----vrLvIVG-----DGP~----reeLe~la~eLgL--------~V~F-LG~~d--d~~~lyasaDV 621 (794)
T PLN02501 566 DLLAKHKNELDG----FNLDVFG-----NGED----AHEVQRAAKRLDL--------NLNF-LKGRD--HADDSLHGYKV 621 (794)
T ss_pred HHHHHHHhhCCC----eEEEEEc-----CCcc----HHHHHHHHHHcCC--------EEEe-cCCCC--CHHHHHHhCCE
Confidence 999998877776 4577776 3454 3445556555432 2554 45543 34579999999
Q ss_pred EEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q 003508 340 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 417 (814)
Q Consensus 340 ~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~ 417 (814)
||+||.+||||+|++|||||+ .|||+|+..|.. .+ |.+|++. .|.++++++|.++|.+++ ++..+.
T Consensus 622 FVlPS~sEgFGlVlLEAMA~G----lPVVATd~pG~e-~V~~g~nGll~--~D~EafAeAI~~LLsd~~-~rl~~~---- 689 (794)
T PLN02501 622 FINPSISDVLCTATAEALAMG----KFVVCADHPSNE-FFRSFPNCLTY--KTSEDFVAKVKEALANEP-QPLTPE---- 689 (794)
T ss_pred EEECCCcccchHHHHHHHHcC----CCEEEecCCCCc-eEeecCCeEec--CCHHHHHHHHHHHHhCch-hhhHHH----
Confidence 999999999999999999994 899999988743 34 4566654 799999999999999765 222211
Q ss_pred HHHHHcCHHHHHHHHHH
Q 003508 418 THVTTHTAQEWAETFVS 434 (814)
Q Consensus 418 ~~v~~~~~~~W~~~fl~ 434 (814)
....++|..-+++++.
T Consensus 690 -a~~~~SWeAaadrLle 705 (794)
T PLN02501 690 -QRYNLSWEAATQRFME 705 (794)
T ss_pred -HHhhCCHHHHHHHHHH
Confidence 1336677766666654
|
|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.1e-18 Score=188.82 Aligned_cols=242 Identities=19% Similarity=0.149 Sum_probs=164.6
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccEEeEecHHHHHHHHHHHHHHh
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 187 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~DlIgf~~~~~~~~fl~~~~~~l 187 (814)
..|+||+|+....++ + .+..+.++.+++|..+.... ..........+.+.+-+......+.
T Consensus 87 ~~Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~--------~~~~~~~~~~~~~~~~s~~~~~~~~------- 147 (335)
T cd03802 87 DFDIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPEL--------LKLYYAARPDVPFVSISDAQRRPWP------- 147 (335)
T ss_pred CCCEEEecCcccchh---h-hcccCCCEEEEecCCCCccc--------chHHHhhCcCCeEEEecHHHHhhcc-------
Confidence 469999999877765 2 23456788899998754211 1123334445555544433221110
Q ss_pred CcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHHHHHHHHH
Q 003508 188 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 267 (814)
Q Consensus 188 ~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~Af~~ll~ 267 (814)
. ..++.++|+|+|++.|.+. ..++.+|+++||+.+.||+..+++|+++.
T Consensus 148 ------------~-~~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~~-- 196 (335)
T cd03802 148 ------------P-LPWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHLAIRAARRA-- 196 (335)
T ss_pred ------------c-ccccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHHHHHHHHhc--
Confidence 0 1467789999999887641 12456899999999999999999987542
Q ss_pred hCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCC-C
Q 003508 268 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-R 346 (814)
Q Consensus 268 ~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~-~ 346 (814)
+ +.|+++|... ..+ .+...+.+... ++ ..|+ +.|.++.+++..+|+.||++|+||. .
T Consensus 197 ---~----~~l~i~G~~~---~~~--~~~~~~~~~~~-~~--------~~v~-~~G~~~~~~~~~~~~~~d~~v~ps~~~ 254 (335)
T cd03802 197 ---G----IPLKLAGPVS---DPD--YFYREIAPELL-DG--------PDIE-YLGEVGGAEKAELLGNARALLFPILWE 254 (335)
T ss_pred ---C----CeEEEEeCCC---CHH--HHHHHHHHhcc-cC--------CcEE-EeCCCCHHHHHHHHHhCcEEEeCCccc
Confidence 3 4577777532 111 12222222110 11 1355 5799999999999999999999997 5
Q ss_pred ccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHH-HHHc
Q 003508 347 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VTTH 423 (814)
Q Consensus 347 EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~-v~~~ 423 (814)
||||++++|||||+ .|+|+|+.+|..+.+ |.+|+++++ +++++++|.+++..+.+ +.++. .+++
T Consensus 255 E~~~~~~lEAma~G----~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~~~-------~~~~~~~~~~ 321 (335)
T cd03802 255 EPFGLVMIEAMACG----TPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLDRA-------ACRRRAERRF 321 (335)
T ss_pred CCcchHHHHHHhcC----CCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccHHH-------HHHHHHHHhC
Confidence 99999999999995 899999999999888 348999987 99999999999765421 11222 3566
Q ss_pred CHHHHHHHHHH
Q 003508 424 TAQEWAETFVS 434 (814)
Q Consensus 424 ~~~~W~~~fl~ 434 (814)
++..-++++++
T Consensus 322 s~~~~~~~~~~ 332 (335)
T cd03802 322 SAARMVDDYLA 332 (335)
T ss_pred CHHHHHHHHHH
Confidence 77666666654
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.3e-18 Score=187.60 Aligned_cols=273 Identities=21% Similarity=0.133 Sum_probs=189.7
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCC--CcHHHHH-HHhhccEEeEecHHHHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLLR-AVLAADLVGFHTYDYARHFVSACT 184 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp--~~~~il~-~ll~~DlIgf~~~~~~~~fl~~~~ 184 (814)
..|+|++|.....++..++.+.....++.+..|...+... ..... ....+.+ .+..+|.+.+.+....+.+.+.
T Consensus 80 ~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-- 156 (359)
T cd03808 80 RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFT-SGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLALKL-- 156 (359)
T ss_pred CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhc-cchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHHHHh--
Confidence 4699999987777777777665556677777776432111 00000 0011111 2335788888887766655431
Q ss_pred HHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHHHHHH
Q 003508 185 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEK 264 (814)
Q Consensus 185 ~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~Af~~ 264 (814)
... ....++.+.|+|+|.+.+.+.... ...++.+|+++||+.+.||+..+++|++.
T Consensus 157 --~~~----------~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~ 212 (359)
T cd03808 157 --GII----------KKKKTVLIPGSGVDLDRFSPSPEP------------IPEDDPVFLFVARLLKDKGIDELLEAARI 212 (359)
T ss_pred --cCC----------CcCceEEecCCCCChhhcCccccc------------cCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 110 013456778999998877543110 12467899999999999999999999999
Q ss_pred HHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECC
Q 003508 265 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTS 344 (814)
Q Consensus 265 ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S 344 (814)
+.+++|+ +.|+++|..... .+ .... ++...+.. ..|.+ .|. .+++..+|+.||++++||
T Consensus 213 l~~~~~~----~~l~i~G~~~~~---~~--~~~~---~~~~~~~~------~~v~~-~g~--~~~~~~~~~~adi~i~ps 271 (359)
T cd03808 213 LKAKGPN----VRLLLVGDGDEE---NP--AAIL---EIEKLGLE------GRVEF-LGF--RDDVPELLAAADVFVLPS 271 (359)
T ss_pred HHhcCCC----eEEEEEcCCCcc---hh--hHHH---HHHhcCCc------ceEEE-eec--cccHHHHHHhccEEEecC
Confidence 8877765 557777753311 11 1111 12222211 23554 455 678999999999999999
Q ss_pred CCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHH-HH
Q 003508 345 LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH-VT 421 (814)
Q Consensus 345 ~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~-v~ 421 (814)
.+||||++++|||+|| .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.+++.++ +.+.++..+++++ .+
T Consensus 272 ~~e~~~~~~~Ea~~~G----~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~~~~~ 346 (359)
T cd03808 272 YREGLPRVLLEAMAMG----RPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDP-ELRARMGQAARKRAEE 346 (359)
T ss_pred cccCcchHHHHHHHcC----CCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHH
Confidence 9999999999999995 899999999998887 56899999999999999999988765 4666777777777 67
Q ss_pred HcCHHHHHHHHH
Q 003508 422 THTAQEWAETFV 433 (814)
Q Consensus 422 ~~~~~~W~~~fl 433 (814)
.+++..+++.++
T Consensus 347 ~~s~~~~~~~~~ 358 (359)
T cd03808 347 EFDEEIVVKKLL 358 (359)
T ss_pred hcCHHHHHHHhh
Confidence 888888887764
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.3e-19 Score=183.80 Aligned_cols=183 Identities=17% Similarity=0.308 Sum_probs=124.4
Q ss_pred EEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC--ceEEccCcEE
Q 003508 471 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGMF 548 (814)
Q Consensus 471 i~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~--l~lia~hG~~ 548 (814)
||+|+||||++. ...++++++++|++|.+ .|+.++|+|||++..+.++++.++ .++|++||+.
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~ 65 (254)
T PF08282_consen 1 IFSDLDGTLLNS--------------DGKISPETIEALKELQE-KGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGAL 65 (254)
T ss_dssp EEEECCTTTCST--------------TSSSCHHHHHHHHHHHH-TTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTE
T ss_pred cEEEECCceecC--------------CCeeCHHHHHHHHhhcc-cceEEEEEccCcccccccccccccchhhhcccccce
Confidence 689999999985 34589999999999998 599999999999999999999874 5999999999
Q ss_pred EEeCCCceeecccccCChHHHHHHHHHHHHHhccCCCceeeeccc-----------------------------------
Q 003508 549 LRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRET----------------------------------- 593 (814)
Q Consensus 549 i~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~----------------------------------- 593 (814)
+....+.. +.....+ .+.+..+++......-...+...+.
T Consensus 66 i~~~~~~~--l~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (254)
T PF08282_consen 66 IDDPKGKI--LYEKPID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEE 140 (254)
T ss_dssp EEETTTEE--EEEESB----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSS
T ss_pred eeeccccc--chhhhee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhccccccccccccccccccc
Confidence 94332321 1101122 3445555554433221111111100
Q ss_pred --eEEEEeccCChhhhHHHHHHHHHHHhcCCCCCCceEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEE
Q 003508 594 --SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVL 671 (814)
Q Consensus 594 --~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~~~~~~v~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl 671 (814)
.+.++. ++ .+...+...+ ...+...-..+..+..++||.|+++|||.|+++|++.++ ++.+.++
T Consensus 141 i~ki~~~~---~~----~~~~~l~~~l-~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~------i~~~~~~ 206 (254)
T PF08282_consen 141 IFKILFFP---DP----EDLEQLREEL-KKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLG------ISPEDII 206 (254)
T ss_dssp ESEEEEES---CH----HHHHHHHHHH-HHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHT------TSGGGEE
T ss_pred ceeeeccc---cc----hhhhhhhhhh-ccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcc------cccceeE
Confidence 011110 01 1233344444 222222113356789999999999999999999999998 5688999
Q ss_pred EEeCCCCCcHHHHHhcc
Q 003508 672 CIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 672 ~iGD~d~nDe~mf~~~~ 688 (814)
+||| +.||++||+.++
T Consensus 207 ~~GD-~~ND~~Ml~~~~ 222 (254)
T PF08282_consen 207 AFGD-SENDIEMLELAG 222 (254)
T ss_dssp EEES-SGGGHHHHHHSS
T ss_pred Eeec-ccccHhHHhhcC
Confidence 9999 999999999984
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.1e-18 Score=187.71 Aligned_cols=268 Identities=16% Similarity=0.058 Sum_probs=178.1
Q ss_pred CCCEEEEeCccch--hHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHH-----HHHhhccEEeEecHHHHHHHH
Q 003508 108 DGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-----RAVLAADLVGFHTYDYARHFV 180 (814)
Q Consensus 108 ~~DiI~ihdyhl~--llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il-----~~ll~~DlIgf~~~~~~~~fl 180 (814)
..|+++||..... .+..++++ .+.++.+.+|..-.....+.. + ...++ ..+..+|.|.+.+....+.+.
T Consensus 84 ~~~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~ 159 (363)
T cd04955 84 KRDIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR-P-AKRYLKFGEKLAVKFADRLIADSPGIKEYLK 159 (363)
T ss_pred cCCeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc-c-hhHHHHHHHHHHHhhccEEEeCCHHHHHHHH
Confidence 3466666654443 33333333 367888888853111111110 0 11111 124467888887765443332
Q ss_pred HHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHH--hCCCeEEEEeccccccCCHHHH
Q 003508 181 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQET--FAGRKVMLGVDRLDMIKGIPQK 258 (814)
Q Consensus 181 ~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~--~~~~~vil~VgRld~~KGi~~~ 258 (814)
..++ ... .++|+|+|...+.+. ...++. +.++++|+++||+.+.||+..+
T Consensus 160 ----~~~~------------~~~--~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 160 ----EKYG------------RDS--TYIPYGADHVVSSEE----------DEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred ----HhcC------------CCC--eeeCCCcChhhcchh----------hhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 1122 111 689999998765431 011222 2355678999999999999999
Q ss_pred HHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhcc
Q 003508 259 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 338 (814)
Q Consensus 259 l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~AD 338 (814)
++|++++.. ++.|+++|.+... ..+.+++.+ +. +.. ..|+ +.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~~~-----~~~~~~~~~---~~----~~~--~~V~-~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNADHN-----TPYGKLLKE---KA----AAD--PRII-FVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCCCc-----chHHHHHHH---Hh----CCC--CcEE-EccccChHHHHHHHHhCC
Confidence 999987632 3568877754211 123333332 11 111 2355 579999999999999999
Q ss_pred EEEECCCC-ccCChhHHHHhhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHh
Q 003508 339 VALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNF 417 (814)
Q Consensus 339 v~v~~S~~-EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~ 417 (814)
++++||.. ||||++++|||+|+ .|+|+|+.+|..+.++.+|.+++|.|. ++++|.++++++ +.+.++.++.+
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~G----~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~-~~~~~~~~~~~ 342 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAYG----CPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEADP-EEVSAMAKAAR 342 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHcC----CCEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhCH-HHHHHHHHHHH
Confidence 99999999 99999999999995 899999999988888778999998776 999999999876 46666777777
Q ss_pred HHHH-HcCHHHHHHHHHHHH
Q 003508 418 THVT-THTAQEWAETFVSEL 436 (814)
Q Consensus 418 ~~v~-~~~~~~W~~~fl~~l 436 (814)
+.+. .+++..-++++++.+
T Consensus 343 ~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 343 ERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHHHHhCCHHHHHHHHHHHh
Confidence 7765 488888777776543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.5e-18 Score=188.60 Aligned_cols=248 Identities=20% Similarity=0.198 Sum_probs=167.0
Q ss_pred CCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCC----ch-hhhccCCCcH--------HH-----HHHHhhccEE
Q 003508 107 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP----SS-EIHRTLPSRS--------DL-----LRAVLAADLV 168 (814)
Q Consensus 107 ~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp----~~-e~~~~lp~~~--------~i-----l~~ll~~DlI 168 (814)
.+.|+|+++..... ...+ ..+..+..+++|.|.+ .. .+....+... .. .+.+..+|.|
T Consensus 82 ~~~D~v~~~~~~~~--~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 82 SGYDLVISSSHAVA--KGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred cCCCEEEEcCcHHh--cccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 35799977653222 1222 3456777788887621 11 1111111100 01 1224567888
Q ss_pred eEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEecc
Q 003508 169 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDR 248 (814)
Q Consensus 169 gf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgR 248 (814)
...+....+.+.+ ..+ . +..++|+|+|.+.|.+.. ..+++++++||
T Consensus 158 i~~S~~~~~~~~~----~~~------------~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~G~ 203 (351)
T cd03804 158 IANSRFVARRIKK----YYG------------R--DATVIYPPVDTDRFTPAE----------------EKEDYYLSVGR 203 (351)
T ss_pred EECCHHHHHHHHH----HhC------------C--CcEEECCCCCHhhcCcCC----------------CCCCEEEEEEc
Confidence 8777765555432 111 1 235789999998775421 23467999999
Q ss_pred ccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHH
Q 003508 249 LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFP 328 (814)
Q Consensus 249 ld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~ 328 (814)
+.+.||++.+++|++++ | +.|+++|. +++...+ ++ .. ...|+ +.|.++.+
T Consensus 204 ~~~~K~~~~li~a~~~~----~-----~~l~ivG~-----g~~~~~l----~~---~~--------~~~V~-~~g~~~~~ 253 (351)
T cd03804 204 LVPYKRIDLAIEAFNKL----G-----KRLVVIGD-----GPELDRL----RA---KA--------GPNVT-FLGRVSDE 253 (351)
T ss_pred CccccChHHHHHHHHHC----C-----CcEEEEEC-----ChhHHHH----Hh---hc--------CCCEE-EecCCCHH
Confidence 99999999999999875 3 34666663 3332222 22 11 12466 46899999
Q ss_pred HHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCH
Q 003508 329 ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSP 406 (814)
Q Consensus 329 el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~ 406 (814)
++..+|+.||++|+||. ||||++++|||||+ .|+|+|..+|..+.+ +.+|++++|.|++++|++|.++++++.
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G----~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASG----TPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNED 328 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcC----CCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcc
Confidence 99999999999999999 99999999999995 899999999988888 568999999999999999999998774
Q ss_pred HHHHHHHHHHhHHHHHcCHHHHHHH
Q 003508 407 EEREKRHWHNFTHVTTHTAQEWAET 431 (814)
Q Consensus 407 ~er~~r~~~~~~~v~~~~~~~W~~~ 431 (814)
...+.+++.++++++.+..++
T Consensus 329 ----~~~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 329 ----FDPQAIRAHAERFSESRFREK 349 (351)
T ss_pred ----cCHHHHHHHHHhcCHHHHHHH
Confidence 122334455566666665544
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.1e-18 Score=191.20 Aligned_cols=279 Identities=16% Similarity=0.130 Sum_probs=179.8
Q ss_pred HHHHHHHHHHhC--CCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhcc------CCCcH------H---
Q 003508 95 NQMFADVVNKHY--KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRT------LPSRS------D--- 157 (814)
Q Consensus 95 N~~fa~~i~~~~--~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~------lp~~~------~--- 157 (814)
+..+...+.+.+ .+.|+|++|...+. .++..+..+.|..+..|--. ++.+.. .|.+. .
T Consensus 89 ~~~~~~~l~~~~~~~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (397)
T TIGR03087 89 SRRLARWVNALLAAEPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVD--SDKWLQYARTKRWPLRWIYRREGRLLL 163 (397)
T ss_pred CHHHHHHHHHHHhhCCCCEEEEeccccc---eeccccccCCCeEeehhhHH--HHHHHHHHhccCcchhHHHHHHHHHHH
Confidence 344445555555 35699999864332 34432234566666666321 111111 11110 0
Q ss_pred -HHH-HHhhccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHH
Q 003508 158 -LLR-AVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQE 235 (814)
Q Consensus 158 -il~-~ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~ 235 (814)
+-+ .+..+|.|.+.+....+.+.+ ..+ ....++.++|+|||++.|.+..... .
T Consensus 164 ~~e~~~~~~ad~vi~~S~~~~~~l~~----~~~-----------~~~~~v~vipngvd~~~f~~~~~~~----------~ 218 (397)
T TIGR03087 164 AYERAIAARFDAATFVSRAEAELFRR----LAP-----------EAAGRITAFPNGVDADFFSPDRDYP----------N 218 (397)
T ss_pred HHHHHHHhhCCeEEEcCHHHHHHHHH----hCC-----------CCCCCeEEeecccchhhcCCCcccc----------C
Confidence 001 233578888877765554432 111 1234678899999999886532110 0
Q ss_pred Hh-CCCeEEEEeccccccCCHHHHH----HHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhccc
Q 003508 236 TF-AGRKVMLGVDRLDMIKGIPQKL----LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 310 (814)
Q Consensus 236 ~~-~~~~vil~VgRld~~KGi~~~l----~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~ 310 (814)
.+ .++++|+++||+++.||++.++ +++..+.+++|++ .|+++|. ++. .+++++.. .
T Consensus 219 ~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~----~l~ivG~-----g~~-----~~~~~l~~----~- 279 (397)
T TIGR03087 219 PYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAA----EFYIVGA-----KPS-----PAVRALAA----L- 279 (397)
T ss_pred CCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCc----EEEEECC-----CCh-----HHHHHhcc----C-
Confidence 11 3567899999999999999988 5566666777775 4777763 221 12333311 1
Q ss_pred CCCCcccEEEecCCCCHHHHHHHHHhccEEEECCC-CccCChhHHHHhhhccCCCceEEEeCCCCccccc-CCceEEECC
Q 003508 311 GTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVNP 388 (814)
Q Consensus 311 g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l-g~~~~lvnP 388 (814)
..|+ +.|.++ ++..+|+.||++|+||. .||++++++|||||| .|+|+|..++..... +..|+++.
T Consensus 280 -----~~V~-~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G----~PVV~t~~~~~~i~~~~~~g~lv~- 346 (397)
T TIGR03087 280 -----PGVT-VTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMA----KPVVASPEAAEGIDALPGAELLVA- 346 (397)
T ss_pred -----CCeE-EeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcC----CCEEecCcccccccccCCcceEeC-
Confidence 1355 568886 68899999999999996 599999999999994 788888864322111 34678886
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHH-HHcCHHHHHHHHHHHH
Q 003508 389 WNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSEL 436 (814)
Q Consensus 389 ~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l 436 (814)
.|++++|++|.++++++ +.+.++..++++++ +.|++...++++.+-+
T Consensus 347 ~~~~~la~ai~~ll~~~-~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 347 ADPADFAAAILALLANP-AEREELGQAARRRVLQHYHWPRNLARLDALL 394 (397)
T ss_pred CCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 89999999999999864 56778888888887 5789998888876655
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.79 E-value=2e-18 Score=179.49 Aligned_cols=181 Identities=18% Similarity=0.219 Sum_probs=117.0
Q ss_pred EEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhccc--CceEEccCcEE
Q 003508 471 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAENGMF 548 (814)
Q Consensus 471 i~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~--~l~lia~hG~~ 548 (814)
|++|+||||++. ...+++++.++|++|++ .|+.++++|||+...+..++..+ ..++|++||+.
T Consensus 1 i~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~ 65 (225)
T TIGR01482 1 IASDIDGTLTDP--------------NRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGE 65 (225)
T ss_pred CeEeccCccCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcE
Confidence 589999999975 34689999999999998 69999999999999998887766 35799999999
Q ss_pred EEeCCC---ceeecccccCChHHHHHHHHHHHHHhccCCCceeeeccceEEEEeccCChhhhHHHHHHHHHHHhcCCCCC
Q 003508 549 LRCTTG---KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN 625 (814)
Q Consensus 549 i~~~~~---~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~~ 625 (814)
+...++ .|... ....|................-.+. . ...+.......+++ .+.++..++ .
T Consensus 66 i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~----~~~~~~~~~-----~- 129 (225)
T TIGR01482 66 ISYNEGMDDIFLAY----LEEEWFLDIVIAKTFPFSRLKVQYP-R-RASLVKMRYGIDVD----TVREIIKEL-----G- 129 (225)
T ss_pred EEeCCCCceEEecc----cCHHHHHHHHHhcccchhhhccccc-c-ccceEEEeecCCHH----HHHHHHHhc-----C-
Confidence 985432 23322 2223322111101000000000000 0 01111111111221 223333332 1
Q ss_pred CceEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 626 ASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 626 ~~~~v~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
..+.+..+...+||.|+++|||.++++++++++ ++.+.+++||| +.||++||+.++.
T Consensus 130 ~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~~GD-~~NDi~m~~~ag~ 186 (225)
T TIGR01482 130 LNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLG------IKPGETLVCGD-SENDIDLFEVPGF 186 (225)
T ss_pred ceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhC------CCHHHEEEECC-CHhhHHHHHhcCc
Confidence 123333556799999999999999999999988 56789999999 9999999999854
|
catalyze the same reaction as SPP. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.9e-18 Score=196.24 Aligned_cols=199 Identities=13% Similarity=0.155 Sum_probs=126.2
Q ss_pred HHHHHHhccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC
Q 003508 459 SIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 538 (814)
Q Consensus 459 ~~~~y~~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~ 538 (814)
..+.|+. +.|+||+|+||||++. +..++++++++|++|.+ .|+.|+|+|||+...+...+..++
T Consensus 300 ~~~~~~~-~iKLIa~DLDGTLLn~--------------d~~Is~~t~eAI~kl~e-kGi~~vIATGR~~~~i~~~l~~L~ 363 (580)
T PLN02887 300 SLRFYKP-KFSYIFCDMDGTLLNS--------------KSQISETNAKALKEALS-RGVKVVIATGKARPAVIDILKMVD 363 (580)
T ss_pred chhhhcc-CccEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHhC
Confidence 3444544 6889999999999975 45689999999999998 699999999999999988887653
Q ss_pred c-----------eEEccCcEEEEeC-CCc-eeecccccCChHHHHHHHHHHHHHhccCCCceeeeccceEE---------
Q 003508 539 L-----------WLAAENGMFLRCT-TGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV--------- 596 (814)
Q Consensus 539 l-----------~lia~hG~~i~~~-~~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~~v~--------- 596 (814)
+ ++|+.||+.+... ++. +... .+ .+.+.++++...+..-...+...+....
T Consensus 364 l~~~~~~I~~~~p~I~~NGA~I~d~~g~~I~~~~----L~---~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~ 436 (580)
T PLN02887 364 LAGKDGIISESSPGVFLQGLLVYGRQGREIYRSN----LD---QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDS 436 (580)
T ss_pred cccccceEeecccEEeecCeEEEECCCcEEEEEe----CC---HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHH
Confidence 2 3567799999842 222 2222 22 3445555544322111111111110000
Q ss_pred EEe--ccC------Ch-hh------------h--HHHHHHHHHHHhcCCCCCCceEE-EEcCcEEEEEECCCCHHHHHHH
Q 003508 597 WNY--KYA------DV-EF------------G--RIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDR 652 (814)
Q Consensus 597 ~hy--r~~------d~-e~------------~--~~~a~~l~~~l~~~~~~~~~~~v-~~g~~~vEI~p~gvnKG~av~~ 652 (814)
+++ ... +. ++ . ......+...+ .+.+. ..+.+ ..+..++||.|+|+|||.||++
T Consensus 437 ~~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l-~~~~~-~~~~v~~S~~~~lEI~p~gvSKG~ALk~ 514 (580)
T PLN02887 437 LHTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYW-SEATG-DRANVVQAQPDMLEIVPPGTSKGNGVKM 514 (580)
T ss_pred HHHhhccccccccCCHHHhhcccCeeEEEEEcChHHHHHHHHHHH-HHHhc-CcEEEEEecCcEEEEecCCCCHHHHHHH
Confidence 000 000 00 00 0 00011222222 22222 12444 4567899999999999999999
Q ss_pred HHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 653 ILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 653 ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
|+++++ ++.+.+++||| +.||.+||+.++.
T Consensus 515 L~e~lG------I~~eeviAFGD-s~NDIeMLe~AG~ 544 (580)
T PLN02887 515 LLNHLG------VSPDEIMAIGD-GENDIEMLQLASL 544 (580)
T ss_pred HHHHcC------CCHHHEEEEec-chhhHHHHHHCCC
Confidence 999998 67899999999 9999999999854
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.6e-18 Score=178.51 Aligned_cols=183 Identities=16% Similarity=0.194 Sum_probs=122.9
Q ss_pred EEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCc----eEEccC
Q 003508 470 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WLAAEN 545 (814)
Q Consensus 470 li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l----~lia~h 545 (814)
||++|+||||++. ...+++.. ++|+ +.+ +|+.++|+|||++..+.+.++.+++ .+|++|
T Consensus 1 li~~DlDgTLl~~--------------~~~~~~~~-~~~~-~~~-~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~n 63 (236)
T TIGR02471 1 LIITDLDNTLLGD--------------DEGLASFV-ELLR-GSG-DAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARV 63 (236)
T ss_pred CeEEeccccccCC--------------HHHHHHHH-HHHH-hcC-CCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECC
Confidence 5899999999974 23355545 7776 544 6999999999999999999887743 489999
Q ss_pred cEEEEeCCC-----ceeecccccCChHHHHHHHHHHHHHhccCCCceeeeccc--eEEEEeccCChhhhHHHHHHHHHHH
Q 003508 546 GMFLRCTTG-----KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRET--SLVWNYKYADVEFGRIQARDMLQHL 618 (814)
Q Consensus 546 G~~i~~~~~-----~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~--~v~~hyr~~d~e~~~~~a~~l~~~l 618 (814)
|+.+..... .|.... ...|. ..+ +..+....+|..++.+.. ...++|+.. ++.. ....++...+
T Consensus 64 Ga~i~~~~~~~~~~~~~~~~----~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l 134 (236)
T TIGR02471 64 GTEIYYGPELQPDRFWQKHI----DHDWR--RQA-VVEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRL 134 (236)
T ss_pred CceEEeCCCCCCChhHHHHH----hcCCC--HHH-HHHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHH
Confidence 999864321 111000 00111 111 233444577777776653 466787753 2211 1123344444
Q ss_pred hcCCCCCCceEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhcc
Q 003508 619 WTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 619 ~~~~~~~~~~~v-~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~ 688 (814)
.... ..+.+ ..+..++||.|+++|||.|++.|+++++ .+++.+++||| +.||++||+.+.
T Consensus 135 -~~~~--~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g------~~~~~~i~~GD-~~nD~~ml~~~~ 195 (236)
T TIGR02471 135 -RQQS--QAAKVILSCGWFLDVLPLRASKGLALRYLSYRWG------LPLEQILVAGD-SGNDEEMLRGLT 195 (236)
T ss_pred -Hhcc--CCEEEEEECCceEEEeeCCCChHHHHHHHHHHhC------CCHHHEEEEcC-CccHHHHHcCCC
Confidence 3321 23333 4566889999999999999999999988 46789999999 999999998763
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-17 Score=179.37 Aligned_cols=189 Identities=16% Similarity=0.239 Sum_probs=122.0
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC--ceEEccC
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 545 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~--l~lia~h 545 (814)
.|+||+|+||||++. ...++++++++|++|.+ +|+.|+|+|||+...+.+.+..++ .++|++|
T Consensus 3 ~kli~~DlDGTLl~~--------------~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~N 67 (272)
T PRK10530 3 YRVIALDLDGTLLTP--------------KKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICCN 67 (272)
T ss_pred ccEEEEeCCCceECC--------------CCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcC
Confidence 589999999999975 34689999999999998 699999999999999998888774 4699999
Q ss_pred cEEEEe-CCCc-eeecccccCChHHHHHHHHHHHHHhccCCCceeeeccceE------------EE------E----ecc
Q 003508 546 GMFLRC-TTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSL------------VW------N----YKY 601 (814)
Q Consensus 546 G~~i~~-~~~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~~v------------~~------h----yr~ 601 (814)
|+.+.. .++. ... ...+ .+.+.++++...+..-...+...+..+ .+ . +..
T Consensus 68 Ga~i~d~~~~~~l~~---~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (272)
T PRK10530 68 GTYLYDYQAKKVLEA---DPLP---VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQ 141 (272)
T ss_pred CcEEEecCCCEEEEe---cCCC---HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEE
Confidence 999984 2232 211 1122 344555554433221111111000000 00 0 000
Q ss_pred CChhhh------------------HHHHHHHHHHHhcCCCCCCceEE-EEcCcEEEEEECCCCHHHHHHHHHHHhccccc
Q 003508 602 ADVEFG------------------RIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKK 662 (814)
Q Consensus 602 ~d~e~~------------------~~~a~~l~~~l~~~~~~~~~~~v-~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~ 662 (814)
.. ++. .....++.+.+ ....++.+ ..+..++||.|++++||.|+++++++++
T Consensus 142 ~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~g---- 212 (272)
T PRK10530 142 VD-SLAQAARQVNAIWKFALTHEDLPQLQHFAKHV----EHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQG---- 212 (272)
T ss_pred cc-cHHHHHhhcCCcEEEEEecCCHHHHHHHHHHH----hhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcC----
Confidence 00 000 00112222222 12223333 3345689999999999999999999988
Q ss_pred CCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 663 MKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 663 ~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
++.+.+++||| +.||.+||+.++.
T Consensus 213 --i~~~e~i~~GD-~~NDi~m~~~ag~ 236 (272)
T PRK10530 213 --WSMKNVVAFGD-NFNDISMLEAAGL 236 (272)
T ss_pred --CCHHHeEEeCC-ChhhHHHHHhcCc
Confidence 56889999999 9999999999853
|
|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.6e-17 Score=180.92 Aligned_cols=196 Identities=20% Similarity=0.289 Sum_probs=147.3
Q ss_pred EEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---CCCeEEEEeccccc--cCCHHHHHHHHHHHHHh-CccccCce
Q 003508 203 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDM--IKGIPQKLLAFEKFLEE-NSDWRGKV 276 (814)
Q Consensus 203 ~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VgRld~--~KGi~~~l~Af~~ll~~-~p~~~~~v 276 (814)
.++.++|+|||.+.|.+.. ....++.+ .++++++++++... .||+..+++|++.+.++ .| ++
T Consensus 159 ~~~~vi~ngi~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~----~~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRD--------KREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKD----DI 226 (365)
T ss_pred CceEEeCCCCcccccCCCc--------HHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCC----Ce
Confidence 4788999999998775431 11233333 24566777777655 89999999999988664 34 35
Q ss_pred EEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCC-HHHHHHHHHhccEEEECCCCccCChhHHH
Q 003508 277 VLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLD-FPALCALYAVTDVALVTSLRDGMNLVSYE 355 (814)
Q Consensus 277 ~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~-~~el~aly~~ADv~v~~S~~EG~~Lv~lE 355 (814)
.++++|... .. . .. .++ ..|+ +.|.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~----~--~~---~~~--------~~v~-~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PE----I--PP---DLP--------FPVH-YLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hh----h--hc---cCC--------CceE-ecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 677666421 10 0 00 111 1355 568888 88999999999999999999999999999
Q ss_pred HhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHH-HHcCHHHHHHHH
Q 003508 356 FVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETF 432 (814)
Q Consensus 356 ama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v-~~~~~~~W~~~f 432 (814)
||+|+ .|+|+|+.+|..+.+ +.+|+++++.|+++++++|.++++++ +++.++.+++++.+ ..++++..++++
T Consensus 284 am~~g----~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~ 358 (365)
T cd03825 284 ALACG----TPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARELAENEFDSRVQAKRY 358 (365)
T ss_pred HHhcC----CCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 99994 899999999988888 34799999999999999999999865 46667777777776 468889888888
Q ss_pred HHHHHH
Q 003508 433 VSELND 438 (814)
Q Consensus 433 l~~l~~ 438 (814)
++.+++
T Consensus 359 ~~~y~~ 364 (365)
T cd03825 359 LSLYEE 364 (365)
T ss_pred HHHHhh
Confidence 876543
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-17 Score=178.96 Aligned_cols=259 Identities=19% Similarity=0.147 Sum_probs=171.7
Q ss_pred CCCEEEEeCc-cchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccEEeEecHHHHHHHHHHHHHH
Q 003508 108 DGDVVWCHDY-HLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRI 186 (814)
Q Consensus 108 ~~DiI~ihdy-hl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~DlIgf~~~~~~~~fl~~~~~~ 186 (814)
..|+|++|+. ...++..+.++ . +.++.+..|..++.... ...+........+..+|.+.+.+....+.+.+.
T Consensus 81 ~~dii~~~~~~~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~---- 153 (353)
T cd03811 81 KPDVVISHLTTTPNVLALLAAR-L-GTKLIVWEHNSLSLELK-RKLRLLLLIRKLYRRADKIVAVSEGVKEDLLKL---- 153 (353)
T ss_pred CCCEEEEcCccchhHHHHHHhh-c-CCceEEEEcCcchhhhc-cchhHHHHHHhhccccceEEEeccchhhhHHHh----
Confidence 4699999987 44444444433 3 78899999987653211 111101112334556888888777655544431
Q ss_pred hCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHHHHHHHH
Q 003508 187 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 266 (814)
Q Consensus 187 l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~Af~~ll 266 (814)
.+. ...++.++|+|+|.+.+.+.... .. .. ....++.+|+++||+.+.||+..+++|++.+.
T Consensus 154 ~~~-----------~~~~~~vi~~~~~~~~~~~~~~~-----~~-~~-~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 154 LGI-----------PPDKIEVIYNPIDIEEIRALAEE-----PL-EL-GIPPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred hcC-----------CccccEEecCCcChhhcCcccch-----hh-hc-CCCCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 111 13578889999998877643211 00 00 11246788999999999999999999999998
Q ss_pred HhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCC
Q 003508 267 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 346 (814)
Q Consensus 267 ~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~ 346 (814)
+++++ +.|+++|.+ +.. +++++++.+.+.. ..|. +.|.+ +++..+|+.||++|+||..
T Consensus 216 ~~~~~----~~l~i~G~~-----~~~----~~~~~~~~~~~~~------~~v~-~~g~~--~~~~~~~~~~d~~i~ps~~ 273 (353)
T cd03811 216 KEGPD----ARLVILGDG-----PLR----EELEALAKELGLA------DRVH-FLGFQ--SNPYPYLKAADLFVLSSRY 273 (353)
T ss_pred hcCCC----ceEEEEcCC-----ccH----HHHHHHHHhcCCC------ccEE-Eeccc--CCHHHHHHhCCEEEeCccc
Confidence 77655 457767642 222 2333444444321 1244 45664 4688999999999999999
Q ss_pred ccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHH---HHHHHHHhcCCHHHHHHHHHHHhH
Q 003508 347 DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV---ANAIARALNMSPEEREKRHWHNFT 418 (814)
Q Consensus 347 EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~l---A~ai~~~L~~~~~er~~r~~~~~~ 418 (814)
||||++++|||+|+ .|+|+|+.+|..+.+ +.+|+++++.|.+++ +++|..++.++ +.+.++..+.++
T Consensus 274 e~~~~~~~Ea~~~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~ 345 (353)
T cd03811 274 EGFPNVLLEAMALG----TPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALLDLLLDP-ELRERLAAAARE 345 (353)
T ss_pred CCCCcHHHHHHHhC----CCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHHHhccCCh-HHHHHHHHHHHH
Confidence 99999999999995 899999999988888 568999999999999 55555555543 233333333433
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.6e-17 Score=182.50 Aligned_cols=239 Identities=13% Similarity=0.006 Sum_probs=159.4
Q ss_pred CCCCEEEEeCccchh---HHHHHHhhCCCCeEEEEEecCCCchhhhc-cC---CC----cHHHHHHH-hhccEEeEecHH
Q 003508 107 KDGDVVWCHDYHLMF---LPKCLKEYNSDMKVGWFLHTPFPSSEIHR-TL---PS----RSDLLRAV-LAADLVGFHTYD 174 (814)
Q Consensus 107 ~~~DiI~ihdyhl~l---lp~~lr~~~~~~~i~~f~H~Pfp~~e~~~-~l---p~----~~~il~~l-l~~DlIgf~~~~ 174 (814)
...|+|++|..+.+. .+.++.+ ..+.|+.+++|..+.. .+. .. +. ...+.+.+ ..+|.|...+..
T Consensus 99 ~~~DvV~~~~~~~~~~~~~~~~~~~-~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~ 175 (371)
T PLN02275 99 PRPDVFLVQNPPSVPTLAVVKLACW-LRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKA 175 (371)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHH-HhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHH
Confidence 356999999876532 3333433 3467888888865311 110 00 00 01112222 347888888876
Q ss_pred HHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCC
Q 003508 175 YARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKG 254 (814)
Q Consensus 175 ~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KG 254 (814)
..+...+ ..+ .. +.++|+|+ .+.|.+.... ..++ .+...+|+++||+.+.||
T Consensus 176 ~~~~l~~----~~g------------~~--i~vi~n~~-~~~f~~~~~~-------~~~~--~~~~~~i~~~grl~~~k~ 227 (371)
T PLN02275 176 MQHELDQ----NWG------------IR--ATVLYDQP-PEFFRPASLE-------IRLR--PNRPALVVSSTSWTPDED 227 (371)
T ss_pred HHHHHHH----hcC------------CC--eEEECCCC-HHHcCcCCch-------hccc--CCCcEEEEEeCceeccCC
Confidence 5544322 111 11 67889984 5667543110 1111 124467889999999999
Q ss_pred HHHHHHHHHHHHH-----------------hCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003508 255 IPQKLLAFEKFLE-----------------ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 317 (814)
Q Consensus 255 i~~~l~Af~~ll~-----------------~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~ 317 (814)
+..+++|+..+.. .+|+ +.|+++|. |++. +++++++.+.+. ..
T Consensus 228 ~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG~-----G~~~----~~l~~~~~~~~l-------~~ 287 (371)
T PLN02275 228 FGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITGK-----GPQK----AMYEEKISRLNL-------RH 287 (371)
T ss_pred HHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEeC-----CCCH----HHHHHHHHHcCC-------Cc
Confidence 9999999988742 2344 66888874 3433 345555555432 24
Q ss_pred EEEecCCCCHHHHHHHHHhccEEEECC---CCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHH
Q 003508 318 IHHLDRSLDFPALCALYAVTDVALVTS---LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNIT 392 (814)
Q Consensus 318 V~~~~g~v~~~el~aly~~ADv~v~~S---~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~ 392 (814)
++++.+.++.++++.+|+.||+||+|+ ..|||+++++|||||+ .|+|+|..+|..+.+ |.+|++|+ |++
T Consensus 288 v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G----~PVVa~~~gg~~eiv~~g~~G~lv~--~~~ 361 (371)
T PLN02275 288 VAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCG----LPVCAVSYSCIGELVKDGKNGLLFS--SSS 361 (371)
T ss_pred eEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCC----CCEEEecCCChHHHccCCCCeEEEC--CHH
Confidence 777777899999999999999999863 2489999999999994 899999999988888 67899997 699
Q ss_pred HHHHHHHHHh
Q 003508 393 EVANAIARAL 402 (814)
Q Consensus 393 ~lA~ai~~~L 402 (814)
++|++|.++|
T Consensus 362 ~la~~i~~l~ 371 (371)
T PLN02275 362 ELADQLLELL 371 (371)
T ss_pred HHHHHHHHhC
Confidence 9999998875
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=175.72 Aligned_cols=198 Identities=18% Similarity=0.228 Sum_probs=122.3
Q ss_pred ccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhccc---C-ceE
Q 003508 466 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---N-LWL 541 (814)
Q Consensus 466 s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~---~-l~l 541 (814)
++.++|++|+||||++. +..+++.++++|++|.+ .|+.|+|+|||+...+.+.++.. . .++
T Consensus 3 ~~~klia~DlDGTLL~~--------------~~~is~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~ 67 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKP--------------RNPITQEMKDTLAKLKS-KGFKIGVVGGSDYPKIKEQLGEDVLEDFDYV 67 (247)
T ss_pred CCCeEEEEECcCCCcCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHhhhhhcccCeE
Confidence 56799999999999976 45689999999999998 69999999999999999888743 2 367
Q ss_pred EccCcEEEEeCCCce-eecccccCChHHHHHHHHHHHHHh-----ccCCCceeeeccceEEEEec--cCCh----hhh--
Q 003508 542 AAENGMFLRCTTGKW-MTTMPEHLNMEWVDSLKHVFEYFT-----ERTPRSHFEQRETSLVWNYK--YADV----EFG-- 607 (814)
Q Consensus 542 ia~hG~~i~~~~~~~-~~~~~~~~~~~~~~~v~~i~~~~~-----~~~~g~~iE~K~~~v~~hyr--~~d~----e~~-- 607 (814)
|+.||+.+...++.+ ....+.....++...+.+.++... ....+.+++.......+.+. .... ++.
T Consensus 68 I~~NGa~I~~~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (247)
T PTZ00174 68 FSENGLVAYKDGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKY 147 (247)
T ss_pred EeCCceEEEECCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhc
Confidence 999999998644332 211100122233333333332210 01122333322111111110 0000 000
Q ss_pred ---HHHHHHHHHHHhcCCCCCCceEEEE-cCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCC---CCCc
Q 003508 608 ---RIQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGKD 680 (814)
Q Consensus 608 ---~~~a~~l~~~l~~~~~~~~~~~v~~-g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~---d~nD 680 (814)
.....++.+.+ .+.+....+.... |..++||.|+|+|||.||+.|+++ .+.+++|||. +.||
T Consensus 148 ~~~~~~~~~~~~~l-~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----------~~eviafGD~~~~~~ND 216 (247)
T PTZ00174 148 DKEHHIREKFIQDL-KKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----------FKEIHFFGDKTFEGGND 216 (247)
T ss_pred CCcchHHHHHHHHH-HHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----------hhhEEEEcccCCCCCCc
Confidence 01123344444 3323332333343 357999999999999999999987 3678999993 3799
Q ss_pred HHHHHhccC
Q 003508 681 EDVYAFFEP 689 (814)
Q Consensus 681 e~mf~~~~~ 689 (814)
++||+.++.
T Consensus 217 ieMl~~~~~ 225 (247)
T PTZ00174 217 YEIYNDPRT 225 (247)
T ss_pred HhhhhcCCC
Confidence 999997654
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.5e-18 Score=178.78 Aligned_cols=191 Identities=16% Similarity=0.249 Sum_probs=128.9
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhccc----CceEEc
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY----NLWLAA 543 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~----~l~lia 543 (814)
+.+|++|+||||++..+ .+...+|++.++|+++.+ +|+.++++|||+...+.++...+ +..+|+
T Consensus 1 ~~li~tDlDGTLl~~~~-----------~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~ 68 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD-----------GDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVT 68 (249)
T ss_pred CeEEEEcCCCcCcCCCC-----------CChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEE
Confidence 46899999999998421 134578999999999987 68899999999999999885543 234899
Q ss_pred cCcEEEEeCCC-----ceeecccccCChHHH-HHHHHHHHHHhccCCCceeeeccceEEEEeccCChhhhHHHHHHHHHH
Q 003508 544 ENGMFLRCTTG-----KWMTTMPEHLNMEWV-DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 617 (814)
Q Consensus 544 ~hG~~i~~~~~-----~~~~~~~~~~~~~~~-~~v~~i~~~~~~~~~g~~iE~K~~~v~~hyr~~d~e~~~~~a~~l~~~ 617 (814)
+||+.|..++. .|.... ...|. +.+..+...+....+....+.+.+.+.+.+.... ......++...
T Consensus 69 ~NGa~I~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~---~~~~~~~l~~~ 141 (249)
T TIGR01485 69 SVGSEIYYGGAEVPDQHWAEYL----SEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEA---APEVIKQLTEM 141 (249)
T ss_pred cCCceEEeCCCCcCCHHHHHHH----hcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhh---hhHHHHHHHHH
Confidence 99999985431 121111 11232 2334443333333344444555666777654211 11112333333
Q ss_pred HhcCCCCCCceEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhc
Q 003508 618 LWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 687 (814)
Q Consensus 618 l~~~~~~~~~~~v-~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~ 687 (814)
+ ... ...+.+ ..+..++||.|++++||.|++.|++.++ ++.+.+++||| +.||++||+.+
T Consensus 142 l-~~~--~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~------i~~~~~i~~GD-~~ND~~ml~~~ 202 (249)
T TIGR01485 142 L-KET--GLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLA------MEPSQTLVCGD-SGNDIELFEIG 202 (249)
T ss_pred H-Hhc--CCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcC------CCccCEEEEEC-ChhHHHHHHcc
Confidence 3 221 123343 5678899999999999999999999987 56899999999 99999999984
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.76 E-value=2e-17 Score=175.68 Aligned_cols=191 Identities=16% Similarity=0.266 Sum_probs=124.1
Q ss_pred EEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC--ceEEccCcE
Q 003508 470 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 547 (814)
Q Consensus 470 li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~--l~lia~hG~ 547 (814)
||++|+||||++. ...++++++++|++|.+ .|+.++|+|||+...+.+.+..++ .++|++||+
T Consensus 1 li~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR00099 1 LIFIDLDGTLLND--------------DHTISPSTKEALAKLRE-KGIKVVLATGRPYKEVKNILKELGLDTPFITANGA 65 (256)
T ss_pred CEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCc
Confidence 5899999999985 34689999999999998 599999999999999999888774 479999999
Q ss_pred EEEeCCCceeecccccCChHHHHHHHHHHHHHhccCCCceeeeccceEEE---------E----ecc----CChh-----
Q 003508 548 FLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVW---------N----YKY----ADVE----- 605 (814)
Q Consensus 548 ~i~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~~v~~---------h----yr~----~d~e----- 605 (814)
.+...++.. +...... .+.+.++++.+....-...+......... + +.. .+.+
T Consensus 66 ~i~~~~~~~--i~~~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T TIGR00099 66 AVIDDQGEI--LYKKPLD---LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDD 140 (256)
T ss_pred EEECCCCCE--EeecCCC---HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcc
Confidence 998543221 1101122 34445555444322111111111100000 0 000 0000
Q ss_pred -h-------hHHHHHHHHHHHhcC-CCCCCceEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeC
Q 003508 606 -F-------GRIQARDMLQHLWTG-PISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 675 (814)
Q Consensus 606 -~-------~~~~a~~l~~~l~~~-~~~~~~~~v-~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD 675 (814)
. ......++...+ .. .+ ...+.+ .++..++||.|+++|||.||+.+++.++ ++.+.+++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~------~~~~~~~~~GD 212 (256)
T TIGR00099 141 ILKILLLFLDPEDLDLLIEAL-NKLEL-EENVSVVSSGPYSIEITAKGVSKGSALQSLAEALG------ISLEDVIAFGD 212 (256)
T ss_pred cceEEEEECCHHHHHHHHHHh-hhhhh-cCCEEEEEecCceEEecCCCCChHHHHHHHHHHcC------CCHHHEEEeCC
Confidence 0 001123333333 21 11 123544 4677899999999999999999999987 56889999999
Q ss_pred CCCCcHHHHHhccC
Q 003508 676 FLGKDEDVYAFFEP 689 (814)
Q Consensus 676 ~d~nDe~mf~~~~~ 689 (814)
+.||.+||+.++.
T Consensus 213 -~~nD~~m~~~~~~ 225 (256)
T TIGR00099 213 -GMNDIEMLEAAGY 225 (256)
T ss_pred -cHHhHHHHHhCCc
Confidence 9999999999975
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1e-16 Score=168.95 Aligned_cols=189 Identities=18% Similarity=0.222 Sum_probs=117.0
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhccc-C---ceEEc
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-N---LWLAA 543 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~-~---l~lia 543 (814)
+.++|+|+||||++. +..+++++.++|++|.+ . +.++|+|||+...+.+.++.. . .++|+
T Consensus 7 ~~i~~~D~DGTLl~~--------------~~~i~~~~~~ai~~l~~-~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~ 70 (245)
T PLN02423 7 GVIALFDVDGTLTAP--------------RKEATPEMLEFMKELRK-V-VTVGVVGGSDLSKISEQLGKTVINDYDYVFS 70 (245)
T ss_pred ceEEEEeccCCCcCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEECCcCHHHHHHHhcccccccCCEEEE
Confidence 346669999999975 34689999999999996 4 999999999999998888764 1 47899
Q ss_pred cCcEEEEeCCCceee-cccccCChHHHHHHHHHHHHHhc---c-----CCCceeeeccceEEEEe--ccCChhh----h-
Q 003508 544 ENGMFLRCTTGKWMT-TMPEHLNMEWVDSLKHVFEYFTE---R-----TPRSHFEQRETSLVWNY--KYADVEF----G- 607 (814)
Q Consensus 544 ~hG~~i~~~~~~~~~-~~~~~~~~~~~~~v~~i~~~~~~---~-----~~g~~iE~K~~~v~~hy--r~~d~e~----~- 607 (814)
+||+++...++.... ..+...+ .+.+.++++.... . ..+.+++..+..+.+.+ .++.... .
T Consensus 71 ~NGa~i~~~g~~i~~~~l~~~l~---~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~ 147 (245)
T PLN02423 71 ENGLVAHKDGKLIGTQSLKSFLG---EDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEK 147 (245)
T ss_pred CCceEEEeCCEEEEEecccccCC---HHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHh
Confidence 999999854432211 1101112 1333344432211 1 12334443222222221 1111010 0
Q ss_pred ----HHHHHHHHHHHhcCCCCCCceEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCC---CCC
Q 003508 608 ----RIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF---LGK 679 (814)
Q Consensus 608 ----~~~a~~l~~~l~~~~~~~~~~~v-~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~---d~n 679 (814)
.....++...+ .+.+....+.+ ..|..++||.++|+|||.||+.|+ . ++.+++|||+ +.|
T Consensus 148 i~~i~~~~~~~~~~l-~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~---~--------~~e~~aFGD~~~~~~N 215 (245)
T PLN02423 148 YDKVHNIRPKMVSVL-REKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE---D--------FDEIHFFGDKTYEGGN 215 (245)
T ss_pred hCccchHHHHHHHHH-HHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc---C--------cCeEEEEeccCCCCCC
Confidence 01123333444 33233323333 345589999999999999999998 2 6899999994 499
Q ss_pred cHHHHHhc
Q 003508 680 DEDVYAFF 687 (814)
Q Consensus 680 De~mf~~~ 687 (814)
|.+|++.-
T Consensus 216 D~eMl~~~ 223 (245)
T PLN02423 216 DHEIFESE 223 (245)
T ss_pred cHHHHhCC
Confidence 99999763
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.5e-17 Score=172.04 Aligned_cols=181 Identities=15% Similarity=0.208 Sum_probs=118.8
Q ss_pred eEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC--ceEEccCc
Q 003508 469 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENG 546 (814)
Q Consensus 469 ~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~--l~lia~hG 546 (814)
++||+|+||||++. +..+++++.++|++|++ +|+.|+|+|||+...+..++..++ .++|++||
T Consensus 2 k~v~~DlDGTLl~~--------------~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NG 66 (215)
T TIGR01487 2 KLVAIDIDGTLTEP--------------NRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAENG 66 (215)
T ss_pred cEEEEecCCCcCCC--------------CcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccC
Confidence 68999999999975 34689999999999988 699999999999999999887774 46999999
Q ss_pred EEEEeCCCceeecccccCChHHHHHHHHHHHHHhccCCCceeeeccceEEEEeccCChhhhHHHHHHHHHHHhcCCCCCC
Q 003508 547 MFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNA 626 (814)
Q Consensus 547 ~~i~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~~~ 626 (814)
+.+...++. .... .....|........ .+....-.. ........+... .+. ...+...+ .. .
T Consensus 67 a~i~~~~~~-~~~~--~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~--~~~-----~~~~~~~l-~~----~ 128 (215)
T TIGR01487 67 GVIFYNKED-IFLA--NMEEEWFLDEEKKK-RFPRDRLSN--EYPRASLVIMRE--GKD-----VDEVREII-KE----R 128 (215)
T ss_pred cEEEeCCCc-EEEe--cccchhhHHHhhhh-hhhhhhccc--ccceeEEEEecC--Ccc-----HHHHHHHH-Hh----C
Confidence 999864332 1111 01111111000000 000000000 000111111111 111 12233333 22 2
Q ss_pred ceEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 627 SVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 627 ~~~v~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
++.+..+...+||.|.+++||.++++++++++ ++.+.+++||| +.||++||+.++.
T Consensus 129 ~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~------i~~~~~i~iGD-s~ND~~ml~~ag~ 184 (215)
T TIGR01487 129 GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLG------IKPEEVAAIGD-SENDIDLFRVVGF 184 (215)
T ss_pred CeEEEecCceEEEecCCCChHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHhCCC
Confidence 45555566789999999999999999999988 46788999999 9999999999975
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-17 Score=172.57 Aligned_cols=185 Identities=14% Similarity=0.093 Sum_probs=119.2
Q ss_pred EEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC---ceEEccCc
Q 003508 470 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN---LWLAAENG 546 (814)
Q Consensus 470 li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~---l~lia~hG 546 (814)
+|++|+||||++. +..+++.++++|++|.+ .|+.|+|+|||+...+...+..++ .++||+||
T Consensus 1 ~i~~DlDGTLL~~--------------~~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NG 65 (221)
T TIGR02463 1 WVFSDLDGTLLDS--------------HSYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENG 65 (221)
T ss_pred CEEEeCCCCCcCC--------------CCCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCC
Confidence 5899999999975 22344559999999987 699999999999999999988874 46999999
Q ss_pred EEEEeC-CCc-ee--ecccccCChHHHHHHHHHHHHHhccCCC-ceeee-----------------------ccceEEEE
Q 003508 547 MFLRCT-TGK-WM--TTMPEHLNMEWVDSLKHVFEYFTERTPR-SHFEQ-----------------------RETSLVWN 598 (814)
Q Consensus 547 ~~i~~~-~~~-~~--~~~~~~~~~~~~~~v~~i~~~~~~~~~g-~~iE~-----------------------K~~~v~~h 598 (814)
+.+... ... +. .......+ + +.+.++++.+.+...- ..... ......+.
T Consensus 66 a~i~~~~~~~~~~~~~~~~~~~~--~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (221)
T TIGR02463 66 AAIHLEELWREEPGYPRIILGIS--Y-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLL 142 (221)
T ss_pred cEEEcCcccccCCCceEEecCCC--H-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEE
Confidence 999742 111 10 00000111 1 3344444432221000 00000 00111111
Q ss_pred eccCChhhhHHHHHHHHHHHhcCCCCCCceEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCC
Q 003508 599 YKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG 678 (814)
Q Consensus 599 yr~~d~e~~~~~a~~l~~~l~~~~~~~~~~~v~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~ 678 (814)
.. .+++ ...++.+.+ .. .++.+..+..++||.|++++||.|+++++++++ ++++.+++||| +.
T Consensus 143 ~~-~~~~----~~~~~~~~l-~~----~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lg------i~~~~vi~~GD-~~ 205 (221)
T TIGR02463 143 WR-DSDS----RMPRFTALL-AD----LGLAIVQGNRFSHVLGASSSKGKAANWLKATYN------QPDVKTLGLGD-GP 205 (221)
T ss_pred ec-Cchh----HHHHHHHHH-HH----cCCeEEecCCeeEEecCCCCHHHHHHHHHHHhC------CCCCcEEEECC-CH
Confidence 10 0111 112222233 22 245666677889999999999999999999998 57899999999 99
Q ss_pred CcHHHHHhccC
Q 003508 679 KDEDVYAFFEP 689 (814)
Q Consensus 679 nDe~mf~~~~~ 689 (814)
||++||+.++.
T Consensus 206 NDi~ml~~ag~ 216 (221)
T TIGR02463 206 NDLPLLEVADY 216 (221)
T ss_pred HHHHHHHhCCc
Confidence 99999999865
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.8e-16 Score=178.10 Aligned_cols=299 Identities=21% Similarity=0.196 Sum_probs=202.4
Q ss_pred CCCEEEEeCccchhHHHHHHhh---CCCCeEEEEEecC-----CC-chhhhccCCC------------cHHHH-HHHhhc
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEY---NSDMKVGWFLHTP-----FP-SSEIHRTLPS------------RSDLL-RAVLAA 165 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~---~~~~~i~~f~H~P-----fp-~~e~~~~lp~------------~~~il-~~ll~~ 165 (814)
.+||||+||||+-|+|.++++. ...++.+|++|.- |+ ...-...||. .-..+ -++..+
T Consensus 130 ~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~a 209 (487)
T COG0297 130 LPDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYA 209 (487)
T ss_pred CCCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheec
Confidence 5799999999999999999996 7789999999954 23 1111223341 11223 346678
Q ss_pred cEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcC-----------CchHHHHHHHH
Q 003508 166 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQ 234 (814)
Q Consensus 166 DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~-----------~~~~~~~~~lr 234 (814)
|.|..-++.|++.-.. ...|. ...+.+.+ +..++.-|=||||.+.+.|.... +.-.+....|+
T Consensus 210 d~vttVSptYa~Ei~t---~~~g~-gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~ 283 (487)
T COG0297 210 DAVTTVSPTYAGEIYT---PEYGE-GLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQ 283 (487)
T ss_pred cEEEEECHHHHHhhcc---ccccc-cchhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHH
Confidence 8888888888766541 11110 00011222 22456677889998776554221 01112233455
Q ss_pred HHhC-----CCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcc
Q 003508 235 ETFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGR 309 (814)
Q Consensus 235 ~~~~-----~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~ 309 (814)
+.++ +.+++..|+||...||++.+++|+..+++.. ..||++|.+ . ..++..+..++.++..+
T Consensus 284 ~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~------~~~vilG~g----d---~~le~~~~~la~~~~~~ 350 (487)
T COG0297 284 ERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG------WQLVLLGTG----D---PELEEALRALASRHPGR 350 (487)
T ss_pred HHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC------ceEEEEecC----c---HHHHHHHHHHHHhcCce
Confidence 5552 5689999999999999999999999999875 346666753 1 24677888888887543
Q ss_pred cCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc-C--------
Q 003508 310 FGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-G-------- 380 (814)
Q Consensus 310 ~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l-g-------- 380 (814)
+. +.-..+..--..+|..||++++||..|++||+-++||.-+ +++|+.+.+|.++.+ .
T Consensus 351 ~~---------~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryG----tvpIv~~tGGLadTV~~~~~~~~~~ 417 (487)
T COG0297 351 VL---------VVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYG----TLPIVRETGGLADTVVDRNEWLIQG 417 (487)
T ss_pred EE---------EEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcC----CcceEcccCCccceecCccchhccC
Confidence 21 2233566667789999999999999999999999999994 899999999999887 2
Q ss_pred -CceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHH--HHcCHHHHHHHHHHHHHHh
Q 003508 381 -AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV--TTHTAQEWAETFVSELNDT 439 (814)
Q Consensus 381 -~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v--~~~~~~~W~~~fl~~l~~~ 439 (814)
.+|+++.|.|.++++.+|.+++..-..... .++...... ..++|+.=+.++++-.+..
T Consensus 418 ~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~-~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~ 478 (487)
T COG0297 418 VGTGFLFLQTNPDHLANALRRALVLYRAPPL-LWRKVQPNAMGADFSWDLSAKEYVELYKPL 478 (487)
T ss_pred ceeEEEEecCCHHHHHHHHHHHHHHhhCCHH-HHHHHHHhhcccccCchhHHHHHHHHHHHH
Confidence 468999888999999999999864321111 022222111 3566666666666554443
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.4e-17 Score=174.01 Aligned_cols=181 Identities=15% Similarity=0.115 Sum_probs=120.7
Q ss_pred EEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC--ceEEccCcE
Q 003508 470 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAENGM 547 (814)
Q Consensus 470 li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~--l~lia~hG~ 547 (814)
+||+|+||||++.. ..+.+.++++|++|.+ .|+.|+|+|||+...+..++..++ .++|++||+
T Consensus 1 li~~DlDGTll~~~--------------~~~~~~~~~~i~~l~~-~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa 65 (256)
T TIGR01486 1 WIFTDLDGTLLDPH--------------GYDWGPAKEVLERLQE-LGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGG 65 (256)
T ss_pred CEEEcCCCCCcCCC--------------CcCchHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCe
Confidence 58999999999762 2133468999999988 599999999999999999988875 479999999
Q ss_pred EEEeCCCc------eeecccccCChHHHHHHHHHHHHHhccCCCceee-ec-----------------------cceEEE
Q 003508 548 FLRCTTGK------WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFE-QR-----------------------ETSLVW 597 (814)
Q Consensus 548 ~i~~~~~~------~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~~iE-~K-----------------------~~~v~~ 597 (814)
++...++. |... ...+ .+.+.++++.+..+.+..+.. .. .....+
T Consensus 66 ~i~~~~~~~~~~~~~~~~--~~i~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (256)
T TIGR01486 66 AIYGPRGWFTEPEYPVIA--LGIP---YEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETI 140 (256)
T ss_pred EEEeCCCcccCCCeEEEE--cCCC---HHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCce
Confidence 99854322 1111 1112 245566665443321111000 00 000000
Q ss_pred EeccCChhhhHHHHHHHHHHHhcCCCCCCceEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCC--CceEEEEeC
Q 003508 598 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTA--IDYVLCIGH 675 (814)
Q Consensus 598 hyr~~d~e~~~~~a~~l~~~l~~~~~~~~~~~v~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~--~d~vl~iGD 675 (814)
.+ +++ ....+...+ . ..++.+..+..++||.|++++||.|+++++++++ ++ .+.+++|||
T Consensus 141 ~~---~~~----~~~~~~~~~-~----~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~~------i~~~~~~~~a~GD 202 (256)
T TIGR01486 141 LW---SEE----RRERFTEAL-V----ELGLEVTHGNRFYHVLGAGSDKGKAANALKQFYN------QPGGAIKVVGLGD 202 (256)
T ss_pred ec---ChH----HHHHHHHHH-H----HcCCEEEeCCceEEEecCCCCHHHHHHHHHHHHh------hcCCCceEEEEcC
Confidence 00 111 112222233 2 2245666666799999999999999999999988 56 789999999
Q ss_pred CCCCcHHHHHhccC
Q 003508 676 FLGKDEDVYAFFEP 689 (814)
Q Consensus 676 ~d~nDe~mf~~~~~ 689 (814)
+.||++||+.++.
T Consensus 203 -~~ND~~Ml~~ag~ 215 (256)
T TIGR01486 203 -SPNDLPLLEVVDL 215 (256)
T ss_pred -CHhhHHHHHHCCE
Confidence 9999999999975
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.3e-17 Score=159.71 Aligned_cols=156 Identities=27% Similarity=0.366 Sum_probs=121.8
Q ss_pred CCCeEEEEeccccccCCHHHHHHHHHHHHHh-CccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003508 238 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 316 (814)
Q Consensus 238 ~~~~vil~VgRld~~KGi~~~l~Af~~ll~~-~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~ 316 (814)
.++++|+++||+.+.||+..+++|+..+.++ .++ +.|+++|. ++ ....+..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~-----~~----~~~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPN----YKLVIVGD-----GE----YKKELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTT----EEEEEESH-----CC----HHHHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCC----eEEEEEcc-----cc----ccccccccccccccc------c
Confidence 4789999999999999999999999999875 554 56777762 12 133344555444321 2
Q ss_pred cEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHH
Q 003508 317 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEV 394 (814)
Q Consensus 317 ~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~l 394 (814)
.|.+ .+.++.+++..+|+.||++|.||..||||++++|||+|+ .|+|+|..+|..+.+ +.+|+++++.|++++
T Consensus 74 ~i~~-~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g----~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l 148 (172)
T PF00534_consen 74 NIIF-LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACG----CPVIASDIGGNNEIINDGVNGFLFDPNDIEEL 148 (172)
T ss_dssp TEEE-EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-----EEEEESSTHHHHHSGTTTSEEEESTTSHHHH
T ss_pred cccc-cccccccccccccccceeccccccccccccccccccccc----cceeeccccCCceeeccccceEEeCCCCHHHH
Confidence 3664 567789999999999999999999999999999999994 899999988888887 567899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHhH
Q 003508 395 ANAIARALNMSPEEREKRHWHNFT 418 (814)
Q Consensus 395 A~ai~~~L~~~~~er~~r~~~~~~ 418 (814)
+++|.+++.++ +.+..+.++.++
T Consensus 149 ~~~i~~~l~~~-~~~~~l~~~~~~ 171 (172)
T PF00534_consen 149 ADAIEKLLNDP-ELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHCCH-HHHHHHHHHhcC
Confidence 99999999876 455666555554
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.3e-16 Score=175.92 Aligned_cols=287 Identities=16% Similarity=0.122 Sum_probs=176.7
Q ss_pred HHHHHhCCCCCEEEEeCccchhHHHHHHh-hCCCCeEEEEEecCCC-chhhhccCCCcHHHHHHHh-hccEEeEecHHHH
Q 003508 100 DVVNKHYKDGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFP-SSEIHRTLPSRSDLLRAVL-AADLVGFHTYDYA 176 (814)
Q Consensus 100 ~~i~~~~~~~DiI~ihdyhl~llp~~lr~-~~~~~~i~~f~H~Pfp-~~e~~~~lp~~~~il~~ll-~~DlIgf~~~~~~ 176 (814)
.++++..+| |+|++|.+.++ |.++.. +..++|+.+..|.-.. +...++. ...+.+.++ .+|.|..++....
T Consensus 117 ~~~l~~~~P-d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~---~~~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 117 RRFLRFWRP-KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQK---FKRFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred HHHHHhhCC-CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHH---HHHHHHHHHHhCCEEEECCHHHH
Confidence 334555555 89988877765 333322 2335677665553222 1111211 122333333 4799999998877
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh-CCCeEEEEeccccccCCH
Q 003508 177 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGI 255 (814)
Q Consensus 177 ~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VgRld~~KGi 255 (814)
+.+.+ +|.. .. +.++|++ +.+.+.+. ........+|+.+ .++++|+++++. .|+.
T Consensus 191 ~~l~~-----~g~~-----------~~-i~vi~n~-~~d~~~~~----~~~~~~~~~r~~~~~~~~vil~~~~~--~~~~ 246 (425)
T PRK05749 191 ERFLA-----LGAK-----------NE-VTVTGNL-KFDIEVPP----ELAARAATLRRQLAPNRPVWIAASTH--EGEE 246 (425)
T ss_pred HHHHH-----cCCC-----------CC-cEecccc-cccCCCCh----hhHHHHHHHHHHhcCCCcEEEEeCCC--chHH
Confidence 76653 2321 22 5566763 33222211 1112334566666 577889999875 6889
Q ss_pred HHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCC-CCc-----ccEEEecCCCCHHH
Q 003508 256 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT-LTA-----VPIHHLDRSLDFPA 329 (814)
Q Consensus 256 ~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~-~~~-----~~V~~~~g~v~~~e 329 (814)
..+|+||+++.+++|++ .|+++| ++++. .+++++++.+.+..+.. .+. ...+++.+ +..+
T Consensus 247 ~~ll~A~~~l~~~~~~~----~liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~--~~~e 312 (425)
T PRK05749 247 ELVLDAHRALLKQFPNL----LLILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGD--TMGE 312 (425)
T ss_pred HHHHHHHHHHHHhCCCc----EEEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEe--cHHH
Confidence 99999999998888875 477664 34432 13455555544321100 000 00222322 3579
Q ss_pred HHHHHHhccEEEE-CCCCccCChhHHHHhhhccCCCceEEEeCCCCcc-c---ccCCceEEECCCCHHHHHHHHHHHhcC
Q 003508 330 LCALYAVTDVALV-TSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA-Q---SLGAGAILVNPWNITEVANAIARALNM 404 (814)
Q Consensus 330 l~aly~~ADv~v~-~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~-e---~lg~~~~lvnP~d~~~lA~ai~~~L~~ 404 (814)
+..+|+.||++++ +|+.||+|++++|||||+ .|+|++...|.. + .+..+|.++.|.|++++|++|.+++++
T Consensus 313 l~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G----~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~ 388 (425)
T PRK05749 313 LGLLYAIADIAFVGGSLVKRGGHNPLEPAAFG----VPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLLTD 388 (425)
T ss_pred HHHHHHhCCEEEECCCcCCCCCCCHHHHHHhC----CCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHhcC
Confidence 9999999999655 788899999999999994 788887654432 3 223578888899999999999999985
Q ss_pred CHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHH
Q 003508 405 SPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 437 (814)
Q Consensus 405 ~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 437 (814)
++.+.+++++++++++++. .-.++.++.+.
T Consensus 389 -~~~~~~m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 389 -PDARQAYGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred -HHHHHHHHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 4577888888888887652 33344444443
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.9e-16 Score=165.63 Aligned_cols=184 Identities=13% Similarity=0.131 Sum_probs=122.1
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC--ceEEccC
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 545 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~--l~lia~h 545 (814)
.++||+|+||||++. ...+++.+.++|++|.+ .|+.++|+|||+...+...+..++ .++++.|
T Consensus 4 ~kli~~DlDGTLl~~--------------~~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~n 68 (273)
T PRK00192 4 KLLVFTDLDGTLLDH--------------HTYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVEN 68 (273)
T ss_pred ceEEEEcCcccCcCC--------------CCcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEc
Confidence 689999999999975 23467889999999987 699999999999999999888875 3699999
Q ss_pred cEEEEeCCC--------------ceeecccccCChHHHHHHHHHHHHHhccCCCc-eeeec-------------------
Q 003508 546 GMFLRCTTG--------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRS-HFEQR------------------- 591 (814)
Q Consensus 546 G~~i~~~~~--------------~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~-~iE~K------------------- 591 (814)
|+.+...++ .|.... ..+ .+.+.++++.+....... .....
T Consensus 69 Ga~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (273)
T PRK00192 69 GAAIYIPKNYFPFQPDGERLKGDYWVIEL--GPP---YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARL 143 (273)
T ss_pred CcEEEecccccccCCccccccCCceEEEc--CCC---HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHH
Confidence 999974322 121111 112 234445544332211100 00000
Q ss_pred ----cceEEEEeccCChhhhHHHHHHHHHHHhcCCCCCCceEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCC
Q 003508 592 ----ETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI 667 (814)
Q Consensus 592 ----~~~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~~~~~~v~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~ 667 (814)
.....+-+.. + ......+...+ . ..++.+..+..++||.|.+ +||.|++++++.++ +++
T Consensus 144 ~~~~~~~~~~~~~~-~----~~~~~~~~~~l-~----~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~------i~~ 206 (273)
T PRK00192 144 AKDREFSEPFLWNG-S----EAAKERFEEAL-K----RLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELYR------RQD 206 (273)
T ss_pred HHhcccCCceeecC-c----hHHHHHHHHHH-H----HcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHHh------ccC
Confidence 0000000000 0 01112222223 2 2346666677899999999 99999999999987 678
Q ss_pred -ceEEEEeCCCCCcHHHHHhccC
Q 003508 668 -DYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 668 -d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
+.+++||| +.||++||+.++.
T Consensus 207 ~~~v~~~GD-s~NDi~m~~~ag~ 228 (273)
T PRK00192 207 GVETIALGD-SPNDLPMLEAADI 228 (273)
T ss_pred CceEEEEcC-ChhhHHHHHhCCe
Confidence 99999999 9999999999975
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.1e-16 Score=178.12 Aligned_cols=199 Identities=16% Similarity=0.212 Sum_probs=124.9
Q ss_pred HHhccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHH-HHhhcCCCceEEEEcCCChHHHHHhhccc----
Q 003508 463 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPL-NALCHDPKTTIVVLSGSDRNVLDKNFQEY---- 537 (814)
Q Consensus 463 y~~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L-~~L~~~~~~~V~IvSGR~~~~l~~~~~~~---- 537 (814)
+..+.+.+|++|+||||++..+ ...+++....+| +++.+ .+..++++|||+...+.++.+.+
T Consensus 4 ~~~~~~~lI~sDLDGTLL~~~~------------~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~ 70 (413)
T PLN02382 4 LSGSPRLMIVSDLDHTMVDHHD------------PENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLT 70 (413)
T ss_pred ccCCCCEEEEEcCCCcCcCCCC------------ccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCC
Confidence 3456788999999999997521 224565555555 88776 69999999999987777765544
Q ss_pred CceEEccCcEEEEeCCC-----ceeecccccCChHHHH-HHHHHHHHHhccCCCceeeeccceEEEEeccCChhhhHHHH
Q 003508 538 NLWLAAENGMFLRCTTG-----KWMTTMPEHLNMEWVD-SLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQA 611 (814)
Q Consensus 538 ~l~lia~hG~~i~~~~~-----~~~~~~~~~~~~~~~~-~v~~i~~~~~~~~~g~~iE~K~~~v~~hyr~~d~e~~~~~a 611 (814)
+..+|+.||++|...+. .|.... +..|.. .+.+.+..+.........+.+...+.+++... ......
T Consensus 71 p~~~I~~nGt~I~~~~~~~~d~~w~~~l----~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~---~~~~~~ 143 (413)
T PLN02382 71 PDITIMSVGTEIAYGESMVPDHGWVEYL----NKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK---KAQEVI 143 (413)
T ss_pred CCEEEEcCCcEEEeCCCCccChhHHHHH----hccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH---HhHHHH
Confidence 34578889999975321 232211 112321 12222222211111222344455666665421 111122
Q ss_pred HHHHHHHhcCCCCCCceEE-EEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhcc
Q 003508 612 RDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 612 ~~l~~~l~~~~~~~~~~~v-~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~ 688 (814)
.++.+.+ .+ ....+.+ .++..++||.|+++|||.||+.|+++++..+ ++++.+++||| +.||++||+.++
T Consensus 144 ~~l~~~~-~~--~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g---i~~~~~iafGD-s~NDleMl~~ag 214 (413)
T PLN02382 144 KELSERL-EK--RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG---KAPVNTLVCGD-SGNDAELFSVPD 214 (413)
T ss_pred HHHHHHH-Hh--cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC---CChhcEEEEeC-CHHHHHHHhcCC
Confidence 3333333 22 1123443 5678899999999999999999999983211 57889999999 999999999886
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.5e-15 Score=175.19 Aligned_cols=187 Identities=15% Similarity=0.126 Sum_probs=123.2
Q ss_pred cCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC--ceEEcc
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAE 544 (814)
Q Consensus 467 ~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~--l~lia~ 544 (814)
.+++||+|+||||++. +..+++.++++|++|.+ .|+.|+|+|||+...+..++..++ .++|++
T Consensus 415 ~~KLIfsDLDGTLLd~--------------d~~i~~~t~eAL~~L~e-kGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~e 479 (694)
T PRK14502 415 FKKIVYTDLDGTLLNP--------------LTYSYSTALDALRLLKD-KELPLVFCSAKTMGEQDLYRNELGIKDPFITE 479 (694)
T ss_pred eeeEEEEECcCCCcCC--------------CCccCHHHHHHHHHHHH-cCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEc
Confidence 5789999999999986 23456789999999998 599999999999999998888774 479999
Q ss_pred CcEEEEeCCCcee------------ecccccCChHHHHHHHHHHHHHhccCC----------Cceeeeccc---------
Q 003508 545 NGMFLRCTTGKWM------------TTMPEHLNMEWVDSLKHVFEYFTERTP----------RSHFEQRET--------- 593 (814)
Q Consensus 545 hG~~i~~~~~~~~------------~~~~~~~~~~~~~~v~~i~~~~~~~~~----------g~~iE~K~~--------- 593 (814)
||+.+...++... .+.....+ .+.+.++++...+... +.++..+..
T Consensus 480 NGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~ 556 (694)
T PRK14502 480 NGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRL 556 (694)
T ss_pred CCCEEEECCCcccccccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHh
Confidence 9999985432100 01101111 2344555544433111 111111000
Q ss_pred ----------------eEEEEeccCChhhhHHHHHHHHHHHhcCCCCCCceEEEEcCcEEEEEECCCCHHHHHHHHHHHh
Q 003508 594 ----------------SLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEI 657 (814)
Q Consensus 594 ----------------~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~~~~~~v~~g~~~vEI~p~gvnKG~av~~ll~~~ 657 (814)
+..+.+.. + .....++.+.+ .+ ..+++..|..++||. .++|||.||++|++.+
T Consensus 557 TgL~~~~a~~a~~Re~seKIl~~g-d----~e~Leel~~~L-~~----~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~ 625 (694)
T PRK14502 557 TDLNLKQAELAKQREYSETVHIEG-D----KRSTNIVLNHI-QQ----SGLEYSFGGRFYEVT-GGNDKGKAIKILNELF 625 (694)
T ss_pred hCCCHHHHHHHhhccCceeEEEcC-C----HHHHHHHHHHH-HH----cCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh
Confidence 00000000 0 01223444444 22 256777799999999 5999999999999998
Q ss_pred cccccCCCCCceEEEE--eCCCCCcHHHHHhccC
Q 003508 658 VHSKKMKTAIDYVLCI--GHFLGKDEDVYAFFEP 689 (814)
Q Consensus 658 ~~~~~~~~~~d~vl~i--GD~d~nDe~mf~~~~~ 689 (814)
+ ++.+.+++| || +.||.+||++++.
T Consensus 626 g------I~~~eViafalGD-s~NDisMLe~Ag~ 652 (694)
T PRK14502 626 R------LNFGNIHTFGLGD-SENDYSMLETVDS 652 (694)
T ss_pred C------CCccceEEEEcCC-cHhhHHHHHhCCc
Confidence 7 445677777 99 9999999999976
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.2e-15 Score=158.26 Aligned_cols=188 Identities=16% Similarity=0.193 Sum_probs=124.7
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC--ceEEccC
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN--LWLAAEN 545 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~--l~lia~h 545 (814)
.|+||+|+||||++. ...+++.+.++|++|.+ .|+.|+++|||+...+..+...++ .++|++|
T Consensus 1 ~KLIftDLDGTLLd~--------------~~~~~~~a~~aL~~Lk~-~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eN 65 (302)
T PRK12702 1 MRLVLSSLDGSLLDL--------------EFNSYGAARQALAALER-RSIPLVLYSLRTRAQLEHLCRQLRLEHPFICED 65 (302)
T ss_pred CcEEEEeCCCCCcCC--------------CCcCCHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeC
Confidence 479999999999986 23467889999999998 599999999999999999888874 4799999
Q ss_pred cEEEEeCCCceeec-c-c---ccCChHH-------HHHHHHHHHHHhccC----CC--------------ceee------
Q 003508 546 GMFLRCTTGKWMTT-M-P---EHLNMEW-------VDSLKHVFEYFTERT----PR--------------SHFE------ 589 (814)
Q Consensus 546 G~~i~~~~~~~~~~-~-~---~~~~~~~-------~~~v~~i~~~~~~~~----~g--------------~~iE------ 589 (814)
|+.|..+.. |... . + ...+..| ...++.+++...... .| .-.+
T Consensus 66 GA~I~~p~~-~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~ 144 (302)
T PRK12702 66 GSAIYVPEH-YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQ 144 (302)
T ss_pred CcEEEEccc-cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHH
Confidence 999985422 2200 0 0 0000001 234444444333221 11 1111
Q ss_pred eccceEEEEeccCChhhhHHHHHHHHHHHhcCCCCCCceEEEEcCcEEEEEE------------------C---CCCHHH
Q 003508 590 QRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRA------------------V---GVTKGA 648 (814)
Q Consensus 590 ~K~~~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~~~~~~v~~g~~~vEI~p------------------~---gvnKG~ 648 (814)
.++++-.+++...+.. +.+.+ ...++.++.|..++.+.. . +.+||.
T Consensus 145 ~Re~SEp~~w~~~~~~--------~~~~~-----~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~ 211 (302)
T PRK12702 145 KREYSEIFSYSGDPAR--------LREAF-----AQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQ 211 (302)
T ss_pred hccCCcceEecCCHHH--------HHHHH-----HHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHH
Confidence 1344555555432211 12223 223678888888877775 5 899999
Q ss_pred HHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 649 AIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 649 av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
|++.|.+.+.-.. ..=.+|++|| +.||.+|++++..
T Consensus 212 A~~~L~~~y~~~~----~~~~tiaLGD-spND~~mLe~~D~ 247 (302)
T PRK12702 212 AVQLLLDCYQRHL----GPIKALGIGC-SPPDLAFLRWSEQ 247 (302)
T ss_pred HHHHHHHHHHhcc----CCceEEEecC-ChhhHHHHHhCCe
Confidence 9999999876210 1226799999 9999999999976
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.2e-15 Score=156.79 Aligned_cols=187 Identities=16% Similarity=0.149 Sum_probs=117.1
Q ss_pred EEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCc--eEEccCcE
Q 003508 470 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENGM 547 (814)
Q Consensus 470 li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l--~lia~hG~ 547 (814)
+||+|+||||++. . .++++++++|++|.+ .|+.++++|||+...+..++..+++ ++|++||+
T Consensus 1 li~~DlDGTLl~~--------------~-~~~~~~~~ai~~l~~-~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa 64 (225)
T TIGR02461 1 VIFTDLDGTLLPP--------------G-YEPGPAREALEELKD-LGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGG 64 (225)
T ss_pred CEEEeCCCCCcCC--------------C-CCchHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCc
Confidence 5899999999984 1 245679999999998 5999999999999999998887754 79999999
Q ss_pred EEEeCCC-------------ceeecccccCChHHHHHHHHHHHHHhccCCCceeeeccceEE--EEeccCChhhh-----
Q 003508 548 FLRCTTG-------------KWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLV--WNYKYADVEFG----- 607 (814)
Q Consensus 548 ~i~~~~~-------------~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~g~~iE~K~~~v~--~hyr~~d~e~~----- 607 (814)
.+..... ... +...... .+.++++++...+..+-.+... .... ..+...+++..
T Consensus 65 ~I~~~~~~~~~~~~~~~~~~~~~-i~~~~l~---~~~~~~il~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 138 (225)
T TIGR02461 65 AIFIPRGYFPFPVGAGREVGNYE-VIELGKP---VAKIRAALKEAENEYGLKYYGN--STAEEVEKLTGLPRELAPLAKR 138 (225)
T ss_pred EEEecCccccccccccccCCCeE-EEEcCCC---HHHHHHHHHHHHHhcCccchhc--CCHHHHHHHHCcCHHHHHHHHh
Confidence 9985321 110 1101112 3344555544332111110000 0000 00000000000
Q ss_pred -----------HHHHHHHHHHHhcCCCCCCceEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCC
Q 003508 608 -----------RIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF 676 (814)
Q Consensus 608 -----------~~~a~~l~~~l~~~~~~~~~~~v~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~ 676 (814)
..+..++.+.+ . ...+.+..+..++++. .++|||.|++.+++.++.. .+...+++|||
T Consensus 139 ~~~~ki~~~~~~e~~~~~~~~~-~----~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~~~~----~~~~~~i~~GD- 207 (225)
T TIGR02461 139 REYSETIFLWSREGWEAILVTA-R----ARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLYKLR----PGAIESVGLGD- 207 (225)
T ss_pred hhcCCcccCCCHHHHHHHHHHH-H----HcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHhccc----cCcccEEEEcC-
Confidence 01122333333 2 2356777788788874 5999999999999988631 24568999999
Q ss_pred CCCcHHHHHhccC
Q 003508 677 LGKDEDVYAFFEP 689 (814)
Q Consensus 677 d~nDe~mf~~~~~ 689 (814)
+.||++||+.++.
T Consensus 208 ~~nD~~ml~~ag~ 220 (225)
T TIGR02461 208 SENDFPMFEVVDL 220 (225)
T ss_pred CHHHHHHHHhCCC
Confidence 9999999999965
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.8e-15 Score=155.96 Aligned_cols=167 Identities=17% Similarity=0.202 Sum_probs=132.6
Q ss_pred eEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh-CCCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEE
Q 003508 201 RLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 279 (814)
Q Consensus 201 ~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv 279 (814)
...++.++||-++++.|.|.+.. +. .+...|+.++||.++||++.+++.+.++.+++|+.+ ++
T Consensus 167 ~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fi 230 (426)
T KOG1111|consen 167 APAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FI 230 (426)
T ss_pred CHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EE
Confidence 45689999999999999985321 12 244789999999999999999999999999999855 77
Q ss_pred EEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhh
Q 003508 280 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 359 (814)
Q Consensus 280 ~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~ 359 (814)
++| |||....+++.+++. +. ..+|. +.|.++++++...|...|||+.||+.|.||++++||+.|
T Consensus 231 i~G-----DGPk~i~lee~lEk~----~l------~~rV~-~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaSc 294 (426)
T KOG1111|consen 231 IIG-----DGPKRIDLEEMLEKL----FL------QDRVV-MLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASC 294 (426)
T ss_pred Eec-----CCcccchHHHHHHHh----hc------cCceE-EecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhC
Confidence 665 566544454444443 11 13566 579999999999999999999999999999999999999
Q ss_pred ccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhc
Q 003508 360 QDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALN 403 (814)
Q Consensus 360 ~~~~~g~vVlS~~~G~~e~lg~~~~lvnP~d~~~lA~ai~~~L~ 403 (814)
| -++|.+..+|..|.|.++-+...+-.++++++++.++++
T Consensus 295 G----L~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~ 334 (426)
T KOG1111|consen 295 G----LPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAIT 334 (426)
T ss_pred C----CEEEEeecCCccccCCccceeccCCChHHHHHHHHHHHH
Confidence 4 788888889988988444344555678999999998886
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.9e-15 Score=159.51 Aligned_cols=188 Identities=18% Similarity=0.291 Sum_probs=117.5
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhccc----CceEEc
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY----NLWLAA 543 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~----~l~lia 543 (814)
++||++|+||||++. +....+.+.+.++ ....++..++++|||++..+.+.+... +..+|+
T Consensus 2 ~~ll~sDlD~Tl~~~--------------~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~ 66 (247)
T PF05116_consen 2 PRLLASDLDGTLIDG--------------DDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIIT 66 (247)
T ss_dssp SEEEEEETBTTTBHC--------------HHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEE
T ss_pred CEEEEEECCCCCcCC--------------CHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEe
Confidence 689999999999921 1112355666666 334578999999999999999887764 457999
Q ss_pred cCcEEEEeCC-----CceeecccccCChHHH-HHHHHHHHHHhccCCCceeeeccceEEEEeccCChhhhHHHHHHHHHH
Q 003508 544 ENGMFLRCTT-----GKWMTTMPEHLNMEWV-DSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQH 617 (814)
Q Consensus 544 ~hG~~i~~~~-----~~~~~~~~~~~~~~~~-~~v~~i~~~~~~~~~g~~iE~K~~~v~~hyr~~d~e~~~~~a~~l~~~ 617 (814)
++|++|.... ..|.... ...|. +.+.+++..+..-.+....+...+.+++.++..... ....++...
T Consensus 67 svGt~I~~~~~~~~d~~w~~~i----~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~~---~~~~~i~~~ 139 (247)
T PF05116_consen 67 SVGTEIYYGENWQPDEEWQAHI----DERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDSA---DILEEIRAR 139 (247)
T ss_dssp TTTTEEEESSTTEE-HHHHHHH----HTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSHC---HHHHHHHHH
T ss_pred cCCeEEEEcCCCcChHHHHHHH----HhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccch---hHHHHHHHH
Confidence 9999998632 1233221 12333 344444443322111111223345566666543321 123455555
Q ss_pred HhcCCCCCCceEEE-EcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhc
Q 003508 618 LWTGPISNASVEVV-QGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 687 (814)
Q Consensus 618 l~~~~~~~~~~~v~-~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~ 687 (814)
+ ++ ....+.++ ++...++|.|+++|||.||+.|+++++ ++.+.++++|| +.||.+||...
T Consensus 140 l-~~--~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~------~~~~~vl~aGD-SgND~~mL~~~ 200 (247)
T PF05116_consen 140 L-RQ--RGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWG------IPPEQVLVAGD-SGNDLEMLEGG 200 (247)
T ss_dssp H-HC--CTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--------GGGEEEEES-SGGGHHHHCCS
T ss_pred H-HH--cCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhC------CCHHHEEEEeC-CCCcHHHHcCc
Confidence 5 32 12344544 467889999999999999999999997 56789999999 99999999544
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.7e-13 Score=151.08 Aligned_cols=262 Identities=17% Similarity=0.137 Sum_probs=159.7
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCC-cHHHH-HHHhhccEEeEecHHHHHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS-RSDLL-RAVLAADLVGFHTYDYARHFVSACTR 185 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~-~~~il-~~ll~~DlIgf~~~~~~~~fl~~~~~ 185 (814)
++.++|.+..-...+... .+..+++|-++=.|+... ..+. ...+. ..+..||+|...+....+.+..
T Consensus 102 ~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~---~~~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~---- 170 (373)
T cd04950 102 GRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFP---GGPPELLEAERRLLKRADLVFTTSPSLYEAKRR---- 170 (373)
T ss_pred CCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccC---CCCHHHHHHHHHHHHhCCEEEECCHHHHHHHhh----
Confidence 556888876544444333 345666665543333211 1111 11112 2345689998877754433211
Q ss_pred HhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHHHHHHHHHHH
Q 003508 186 ILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKF 265 (814)
Q Consensus 186 ~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~~~l~Af~~l 265 (814)
+ + .++.++|+|+|.+.|.+....+.. .+.+ ...++++|+|+|++.+.+++. +|.++
T Consensus 171 ------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll~~l--- 226 (373)
T cd04950 171 ------------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LLEAL--- 226 (373)
T ss_pred ------------C-C--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HHHHH---
Confidence 1 1 357789999999999754321110 0111 124678999999999977664 34333
Q ss_pred HHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCC
Q 003508 266 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 345 (814)
Q Consensus 266 l~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~ 345 (814)
.+.+|++ .|++||... ... + ...+ .. ...|+ +.|.++.++++.+|+.||++++|+.
T Consensus 227 a~~~p~~----~~vliG~~~--~~~---~----~~~~----~~------~~nV~-~~G~~~~~~l~~~l~~~Dv~l~P~~ 282 (373)
T cd04950 227 AKARPDW----SFVLIGPVD--VSI---D----PSAL----LR------LPNVH-YLGPKPYKELPAYLAGFDVAILPFR 282 (373)
T ss_pred HHHCCCC----EEEEECCCc--Ccc---C----hhHh----cc------CCCEE-EeCCCCHHHHHHHHHhCCEEecCCc
Confidence 3456775 477676431 000 0 0111 00 12466 4689999999999999999999986
Q ss_pred -----CccCChhHHHHhhhccCCCceEEEeCCCCcccccCCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHH
Q 003508 346 -----RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 420 (814)
Q Consensus 346 -----~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v 420 (814)
.+++++.++|||||| .|+|+|....+.+.. . +..+.+.|+++++++|.++|..+..++.++. .+.+
T Consensus 283 ~~~~~~~~~P~Kl~EylA~G----~PVVat~~~~~~~~~-~-~~~~~~~d~~~~~~ai~~~l~~~~~~~~~~~---~~~~ 353 (373)
T cd04950 283 LNELTRATSPLKLFEYLAAG----KPVVATPLPEVRRYE-D-EVVLIADDPEEFVAAIEKALLEDGPARERRR---LRLA 353 (373)
T ss_pred cchhhhcCCcchHHHHhccC----CCEEecCcHHHHhhc-C-cEEEeCCCHHHHHHHHHHHHhcCCchHHHHH---HHHH
Confidence 357899999999994 788888765544332 3 3444466999999999998765543333322 2267
Q ss_pred HHcCHHHHHHHHHHHHH
Q 003508 421 TTHTAQEWAETFVSELN 437 (814)
Q Consensus 421 ~~~~~~~W~~~fl~~l~ 437 (814)
++|||+.=++.++..|.
T Consensus 354 ~~~sW~~~a~~~~~~l~ 370 (373)
T cd04950 354 AQNSWDARAAEMLEALQ 370 (373)
T ss_pred HHCCHHHHHHHHHHHHH
Confidence 88888887877775554
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.7e-13 Score=150.59 Aligned_cols=251 Identities=15% Similarity=0.117 Sum_probs=172.6
Q ss_pred HHHhhccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh--
Q 003508 160 RAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-- 237 (814)
Q Consensus 160 ~~ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-- 237 (814)
+....+|.+.-.++...+.|..... .++. ..+.+...+||.+.+.+....+. .+.....|...
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~~~~---~L~~-----------~d~~~~y~ei~~s~~~~~~~~~~-~~~~~~~r~~~~v 269 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKATFV---SLSN-----------SDITSTYPEIDGSWFTYGQYESH-LELRLPVRLYRGV 269 (495)
T ss_pred hhhhccceEecchhhhhhhhhhhhh---hcCC-----------CCcceeeccccchhccccccccc-hhcccccceeeee
Confidence 3456678886666555555543222 1111 11455666788776653211100 00111111111
Q ss_pred -CCCeEEEEeccccccCCHHHHHHHHHHHHHhCcccc-CceEEEEEecC-CCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003508 238 -AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWR-GKVVLLQIAVP-TRTDVPEYQRLTSQVHEIVGRINGRFGTLT 314 (814)
Q Consensus 238 -~~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~-~~v~Lv~vg~p-~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~ 314 (814)
..+.++..+-|+.|.||+...|.||.++...-|+.. ....++..|.+ +.+...+..++.+++.+++++.+.. |
T Consensus 270 ~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~-g--- 345 (495)
T KOG0853|consen 270 SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLL-G--- 345 (495)
T ss_pred cccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCcc-C---
Confidence 237788999999999999999999999987765411 13455555533 3233455566778888888876421 2
Q ss_pred cccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHH
Q 003508 315 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNIT 392 (814)
Q Consensus 315 ~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~ 392 (814)
.+++|....++.+.+.++..+.+...++..|.||+|++|||||+ .|+|++..+|-.|.+ |.+|++++| +.+
T Consensus 346 --~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~g----lPvvAt~~GGP~EiV~~~~tG~l~dp-~~e 418 (495)
T KOG0853|consen 346 --QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACG----LPVVATNNGGPAEIVVHGVTGLLIDP-GQE 418 (495)
T ss_pred --ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcC----CCEEEecCCCceEEEEcCCcceeeCC-chH
Confidence 24456667788888888888899999998899999999999995 899999999999998 789999999 676
Q ss_pred ---HHHHHHHHHhcCCHHHHHHHHHHHhHHHHH-cCHHHHHHHHHHHHH
Q 003508 393 ---EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSELN 437 (814)
Q Consensus 393 ---~lA~ai~~~L~~~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~l~ 437 (814)
.+|++|.++..++. .+.+++++++++|++ |+++...+++.+.+.
T Consensus 419 ~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 419 AVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSWQHYSERIASVLG 466 (495)
T ss_pred HHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhH
Confidence 59999999999764 688889999999988 776555555544444
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.3e-12 Score=147.04 Aligned_cols=194 Identities=10% Similarity=0.052 Sum_probs=127.0
Q ss_pred EEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhC---CCeEEEEeccccccCCHHHHHHHHHHHHHh----CccccC
Q 003508 202 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKLLAFEKFLEE----NSDWRG 274 (814)
Q Consensus 202 ~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~---~~~vil~VgRld~~KGi~~~l~Af~~ll~~----~p~~~~ 274 (814)
..+|.+++++|+.+.+.+. . ....+|++++ ++++|+++||....|++..+++++..++.. .++
T Consensus 172 ~~ki~v~g~~v~~~f~~~~-~------~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~--- 241 (382)
T PLN02605 172 PSQIRVYGLPIRPSFARAV-R------PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPI--- 241 (382)
T ss_pred HHHEEEECcccCHhhccCC-C------CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCC---
Confidence 3467778888887543321 1 1234566663 678999999999999999999999876521 233
Q ss_pred ceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHH
Q 003508 275 KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSY 354 (814)
Q Consensus 275 ~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~l 354 (814)
+.++.+++ +++ .++++++++.. + ..|+ +.|+++ +++.+|++||++|.+| .|++++
T Consensus 242 -~~~~vi~G----~~~---~~~~~L~~~~~------~----~~v~-~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~ 296 (382)
T PLN02605 242 -GQVVVICG----RNK---KLQSKLESRDW------K----IPVK-VRGFVT--NMEEWMGACDCIITKA----GPGTIA 296 (382)
T ss_pred -ceEEEEEC----CCH---HHHHHHHhhcc------c----CCeE-EEeccc--cHHHHHHhCCEEEECC----CcchHH
Confidence 33333332 122 23334443310 1 1355 467774 7999999999999876 378999
Q ss_pred HHhhhccCCCceEEEeCCC-----CcccccCCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHcCHHHHH
Q 003508 355 EFVACQDLKKGVLILSEFA-----GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWA 429 (814)
Q Consensus 355 Eama~~~~~~g~vVlS~~~-----G~~e~lg~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~ 429 (814)
|||||+ .|+|++... |.++.+.++|.-+.+.|+++++++|.++|.+.++.++++.+++++....+....-+
T Consensus 297 EAma~g----~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~ 372 (382)
T PLN02605 297 EALIRG----LPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIV 372 (382)
T ss_pred HHHHcC----CCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHH
Confidence 999995 899999852 33333412333334589999999999999875566777777777777666555555
Q ss_pred HHHHH
Q 003508 430 ETFVS 434 (814)
Q Consensus 430 ~~fl~ 434 (814)
+.+++
T Consensus 373 ~~l~~ 377 (382)
T PLN02605 373 HDLHE 377 (382)
T ss_pred HHHHH
Confidence 44443
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.6e-11 Score=131.95 Aligned_cols=197 Identities=24% Similarity=0.332 Sum_probs=141.7
Q ss_pred EEEEeecccChhhhhhh-hcCCchHHHHHHHHHHhCC--CeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEE
Q 003508 204 RVAAFPIGIDSERFIRA-LEINPVQVHIKELQETFAG--RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 280 (814)
Q Consensus 204 ~i~v~p~GId~~~f~~~-~~~~~~~~~~~~lr~~~~~--~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~ 280 (814)
++.++|+|++.+.+... .. ...+ ..+++++||+.+.||+...++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIG-------------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccC-------------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 56788999999887642 00 0112 36899999999999999999999998877655 45666
Q ss_pred EecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhc
Q 003508 281 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 360 (814)
Q Consensus 281 vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~ 360 (814)
+|..... ...+..++.+.+.. ..|.+ .|.++.+++..+|+.||++++||..||||++++|||+|+
T Consensus 236 ~g~~~~~--------~~~~~~~~~~~~~~------~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGPER--------REELEKLAKKLGLE------DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCCcc--------HHHHHHHHHHhCCC------CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 6543211 11222344443221 23554 788888899999999999999999999999999999994
Q ss_pred cCCCceEEEeCCCCcccccCCc--eEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHH-HHcCHHHHHHHHHHHHH
Q 003508 361 DLKKGVLILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELN 437 (814)
Q Consensus 361 ~~~~g~vVlS~~~G~~e~lg~~--~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~l~ 437 (814)
.|+|+|...|..+.+..+ |+++++.|.+++++++..++++. +.+.......++.+ ..+++..-++.++..+.
T Consensus 301 ----~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (381)
T COG0438 301 ----TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEFSWERIAEQLLELYE 375 (381)
T ss_pred ----CcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 789999999888888443 78888889999999999999876 34444444344444 46666665555544444
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.1e-10 Score=131.15 Aligned_cols=268 Identities=12% Similarity=0.071 Sum_probs=159.4
Q ss_pred HHHHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccEEeEecHHHHHHH
Q 003508 100 DVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHF 179 (814)
Q Consensus 100 ~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~DlIgf~~~~~~~~f 179 (814)
.++++..+ +|+|+.| +....++.+.+....++|+... ++-|-.. ...+. -.+|.+...+....+.+
T Consensus 97 ~~~l~~~~-pD~Vi~~-~~~~~~~~~~~~~~~~ip~~~~-~td~~~~--------~~~~~---~~ad~i~~~s~~~~~~l 162 (380)
T PRK13609 97 KLLLQAEK-PDIVINT-FPIIAVPELKKQTGISIPTYNV-LTDFCLH--------KIWVH---REVDRYFVATDHVKKVL 162 (380)
T ss_pred HHHHHHhC-cCEEEEc-ChHHHHHHHHHhcCCCCCeEEE-eCCCCCC--------ccccc---CCCCEEEECCHHHHHHH
Confidence 34444444 5999885 5556677666655556776532 2212110 11111 14788887776544333
Q ss_pred HHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhC---CCe-EEEEeccccccCCH
Q 003508 180 VSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRK-VMLGVDRLDMIKGI 255 (814)
Q Consensus 180 l~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~---~~~-vil~VgRld~~KGi 255 (814)
.+ .|. ...++.++++.++. .|.+.. + ...++++++ +++ ++++.|++...||+
T Consensus 163 ~~-----~gi-----------~~~ki~v~G~p~~~-~f~~~~---~----~~~~~~~~~l~~~~~~il~~~G~~~~~k~~ 218 (380)
T PRK13609 163 VD-----IGV-----------PPEQVVETGIPIRS-SFELKI---N----PDIIYNKYQLCPNKKILLIMAGAHGVLGNV 218 (380)
T ss_pred HH-----cCC-----------ChhHEEEECcccCh-HHcCcC---C----HHHHHHHcCCCCCCcEEEEEcCCCCCCcCH
Confidence 32 122 12345454443432 343211 1 122455552 344 55667999999999
Q ss_pred HHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003508 256 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 335 (814)
Q Consensus 256 ~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~ 335 (814)
..+++++.+ .|+ +.++++++. +.+ +++++++++.+.+ ..|++ .|+++ ++..+|+
T Consensus 219 ~~li~~l~~----~~~----~~~viv~G~---~~~----~~~~l~~~~~~~~--------~~v~~-~g~~~--~~~~l~~ 272 (380)
T PRK13609 219 KELCQSLMS----VPD----LQVVVVCGK---NEA----LKQSLEDLQETNP--------DALKV-FGYVE--NIDELFR 272 (380)
T ss_pred HHHHHHHhh----CCC----cEEEEEeCC---CHH----HHHHHHHHHhcCC--------CcEEE-Eechh--hHHHHHH
Confidence 999888743 344 446655532 122 3445555544322 13664 47764 6889999
Q ss_pred hccEEEECCCCccCChhHHHHhhhccCCCceEEEeCC-CCcc----cccCCceEEECCCCHHHHHHHHHHHhcCCHHHHH
Q 003508 336 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-AGAA----QSLGAGAILVNPWNITEVANAIARALNMSPEERE 410 (814)
Q Consensus 336 ~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~-~G~~----e~lg~~~~lvnP~d~~~lA~ai~~~L~~~~~er~ 410 (814)
.||++|. ++.|++++|||||+ .|+|++.. .|.. ..+...|..+.+.|+++++++|.++++++ +.+.
T Consensus 273 ~aD~~v~----~~gg~t~~EA~a~g----~PvI~~~~~~g~~~~n~~~~~~~G~~~~~~~~~~l~~~i~~ll~~~-~~~~ 343 (380)
T PRK13609 273 VTSCMIT----KPGGITLSEAAALG----VPVILYKPVPGQEKENAMYFERKGAAVVIRDDEEVFAKTEALLQDD-MKLL 343 (380)
T ss_pred hccEEEe----CCCchHHHHHHHhC----CCEEECCCCCCcchHHHHHHHhCCcEEEECCHHHHHHHHHHHHCCH-HHHH
Confidence 9999874 45589999999995 78888764 4421 12223455566789999999999999864 4666
Q ss_pred HHHHHHhHHHHHcCHHHHHHHHHHHHHHhH
Q 003508 411 KRHWHNFTHVTTHTAQEWAETFVSELNDTV 440 (814)
Q Consensus 411 ~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 440 (814)
++.++.++....+++...++.+++.+...+
T Consensus 344 ~m~~~~~~~~~~~s~~~i~~~i~~~~~~~~ 373 (380)
T PRK13609 344 QMKEAMKSLYLPEPADHIVDDILAENHVEP 373 (380)
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHhhhhhh
Confidence 666667777777788888888777665443
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.3e-10 Score=120.05 Aligned_cols=306 Identities=13% Similarity=0.234 Sum_probs=191.8
Q ss_pred HHHHHHHHHHHHHHHHH---hCC-CCCEEEE--eCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHH
Q 003508 88 FAAYIKANQMFADVVNK---HYK-DGDVVWC--HDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 161 (814)
Q Consensus 88 w~~Y~~vN~~fa~~i~~---~~~-~~DiI~i--hdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ 161 (814)
|..+--.-|..+.-|+. +++ ++|| || ..|.+.. |.+ |+ +.+.||+...|.|--+.+++..+-.+..- +
T Consensus 126 ~~hfTllgQaigsmIl~~Eai~r~~Pdi-~IDtMGY~fs~-p~~-r~-l~~~~V~aYvHYP~iS~DML~~l~qrq~s--~ 199 (465)
T KOG1387|consen 126 WKHFTLLGQAIGSMILAFEAIIRFPPDI-FIDTMGYPFSY-PIF-RR-LRRIPVVAYVHYPTISTDMLKKLFQRQKS--G 199 (465)
T ss_pred ccceehHHHHHHHHHHHHHHHHhCCchh-eEecCCCcchh-HHH-HH-HccCceEEEEecccccHHHHHHHHhhhhc--c
Confidence 66655555555555442 344 5554 56 4455432 333 33 45799999999988777766554321110 0
Q ss_pred HhhccEEeEecHHHHHHHHHHHHHHhCcccC---------CCce-e-eCCeEEEEEEeecccChhhhhhhhcCCchHHHH
Q 003508 162 VLAADLVGFHTYDYARHFVSACTRILGFEGT---------PEGV-E-DQGRLTRVAAFPIGIDSERFIRALEINPVQVHI 230 (814)
Q Consensus 162 ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~---------~~~~-~-~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~ 230 (814)
++ ..----|-|.|... -...|...+ .+-+ + ++... +.++.+-.+++.+.....+
T Consensus 200 ~l-----~~~KlaY~rlFa~l-Y~~~G~~ad~vm~NssWT~nHI~qiW~~~~--~~iVyPPC~~e~lks~~~t------- 264 (465)
T KOG1387|consen 200 IL-----VWGKLAYWRLFALL-YQSAGSKADIVMTNSSWTNNHIKQIWQSNT--CSIVYPPCSTEDLKSKFGT------- 264 (465)
T ss_pred hh-----hhHHHHHHHHHHHH-HHhccccceEEEecchhhHHHHHHHhhccc--eeEEcCCCCHHHHHHHhcc-------
Confidence 11 11111233333211 111111100 0000 1 22222 3333333666554433211
Q ss_pred HHHHHHhCCCeEEEEeccccccCCHHHHHHHHHHHHHhCcc--ccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhc
Q 003508 231 KELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSD--WRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 308 (814)
Q Consensus 231 ~~lr~~~~~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~--~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~ 308 (814)
.-+....+|++|.+.|.|+.. .|+-++.++.+.|. .-.++.|+++| ..|+.. + .+.-+.++.++.+++.
T Consensus 265 -----e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRnee-D-~ervk~Lkd~a~~L~i 335 (465)
T KOG1387|consen 265 -----EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRNEE-D-EERVKSLKDLAEELKI 335 (465)
T ss_pred -----cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCChh-h-HHHHHHHHHHHHhcCC
Confidence 012456899999999999999 78888888888887 33468888776 444432 2 2345667888888764
Q ss_pred ccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcc--ccc----C-C
Q 003508 309 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--QSL----G-A 381 (814)
Q Consensus 309 ~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~--e~l----g-~ 381 (814)
. ..|. |.-.++.+++..+|..|-+.|-+-..|-||+.+.||||+ |.+.++..+|.+ +.+ | .
T Consensus 336 ~------~~v~-F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAA-----GlIpi~h~SgGP~lDIV~~~~G~~ 403 (465)
T KOG1387|consen 336 P------KHVQ-FEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAA-----GLIPIVHNSGGPLLDIVTPWDGET 403 (465)
T ss_pred c------cceE-EEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhc-----CceEEEeCCCCCceeeeeccCCcc
Confidence 3 2466 467899999999999999999999999999999999999 455555555544 333 4 4
Q ss_pred ceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHHH
Q 003508 382 GAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 437 (814)
Q Consensus 382 ~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 437 (814)
+|++. | +.++-|++|.+++.+..++|..+.+.+|..+.+|+-....+.|...+.
T Consensus 404 tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~ 457 (465)
T KOG1387|consen 404 TGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPIC 457 (465)
T ss_pred ceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHH
Confidence 78887 3 567889999999999999988888888888988887776666664443
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.2e-11 Score=122.47 Aligned_cols=118 Identities=29% Similarity=0.366 Sum_probs=85.8
Q ss_pred EeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCC
Q 003508 245 GVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRS 324 (814)
Q Consensus 245 ~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~ 324 (814)
++||+.+.||+..+++|+..+.+++|+ +.++++|.... ..+ . ..++... +. ...|.+ .+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~----~~~~i~G~~~~---~~~--~----~~~~~~~----~~--~~~v~~-~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPD----LKLVIAGDGPE---REY--L----EELLAAL----LL--LDRVIF-LGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCC----eEEEEEeCCCC---hHH--H----HHHHHhc----CC--cccEEE-eCC
Confidence 999999999999999999999887766 55777774321 111 1 1111111 11 134665 456
Q ss_pred C-CHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEE
Q 003508 325 L-DFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILV 386 (814)
Q Consensus 325 v-~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lv 386 (814)
+ +.+++..+++.||++++||..||++++++|||+|+ .|+|+|+..+..+.+ +.+|++|
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g----~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACG----LPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCC----CCEEEcCCCCcceEEECCCceEEC
Confidence 5 55666677777999999999999999999999995 899999999988866 4566653
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.6e-11 Score=130.15 Aligned_cols=245 Identities=17% Similarity=0.158 Sum_probs=148.9
Q ss_pred HHHHhCCCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccEEeEecHHHHHHHH
Q 003508 101 VVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFV 180 (814)
Q Consensus 101 ~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~DlIgf~~~~~~~~fl 180 (814)
++++.. .+|+|+.|..... ++..+..+..+.|+.++.|..||. .. +.++ ...+|.|...++...+.
T Consensus 83 ~~i~~~-~pDvI~~~~~~~~-~~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~~--~~~~~~vi~~s~~~~~~-- 148 (350)
T cd03785 83 KILKKF-KPDVVVGFGGYVS-GPVGLAAKLLGIPLVIHEQNAVPG--LA------NRLL--ARFADRVALSFPETAKY-- 148 (350)
T ss_pred HHHHhc-CCCEEEECCCCcc-hHHHHHHHHhCCCEEEEcCCCCcc--HH------HHHH--HHhhCEEEEcchhhhhc--
Confidence 333433 4699999875443 333333344467776655544431 10 1111 12267777666532211
Q ss_pred HHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh---CCCeEEEEeccccccCCHHH
Q 003508 181 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 257 (814)
Q Consensus 181 ~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~~vil~VgRld~~KGi~~ 257 (814)
+ ...++.++|+|+|.+.+.+.. . ++++ .++++|+.+++....|+...
T Consensus 149 ------~-------------~~~~~~~i~n~v~~~~~~~~~-------~----~~~~~~~~~~~~i~~~~g~~~~~~~~~ 198 (350)
T cd03785 149 ------F-------------PKDKAVVTGNPVREEILALDR-------E----RARLGLRPGKPTLLVFGGSQGARAINE 198 (350)
T ss_pred ------C-------------CCCcEEEECCCCchHHhhhhh-------h----HHhcCCCCCCeEEEEECCcHhHHHHHH
Confidence 0 134677899999988765321 1 2233 35778888888888888876
Q ss_pred HH-HHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 003508 258 KL-LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 336 (814)
Q Consensus 258 ~l-~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ 336 (814)
++ +|++.+.+ ++ +.++.++++ + +.++ +++.+.+. + ..|+ +.|++ +++..+|+.
T Consensus 199 ~l~~a~~~l~~--~~----~~~~~i~G~----g-~~~~----l~~~~~~~----~----~~v~-~~g~~--~~~~~~l~~ 252 (350)
T cd03785 199 AVPEALAELLR--KR----LQVIHQTGK----G-DLEE----VKKAYEEL----G----VNYE-VFPFI--DDMAAAYAA 252 (350)
T ss_pred HHHHHHHHhhc--cC----eEEEEEcCC----c-cHHH----HHHHHhcc----C----CCeE-Eeehh--hhHHHHHHh
Confidence 54 77776642 22 333323322 2 2223 33343332 1 1255 45665 789999999
Q ss_pred ccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCc--------cccc--CCceEEECCC--CHHHHHHHHHHHhcC
Q 003508 337 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA--------AQSL--GAGAILVNPW--NITEVANAIARALNM 404 (814)
Q Consensus 337 ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~--------~e~l--g~~~~lvnP~--d~~~lA~ai~~~L~~ 404 (814)
||++|.+| | +.+++|||+|+ .|+|++...+. ++.+ +..|++|++. |.++++++|.+++.+
T Consensus 253 ad~~v~~s---g-~~t~~Eam~~G----~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~ 324 (350)
T cd03785 253 ADLVISRA---G-ASTVAELAALG----LPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSD 324 (350)
T ss_pred cCEEEECC---C-HhHHHHHHHhC----CCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC
Confidence 99999877 3 57899999995 78888765441 3344 4578999987 999999999999974
Q ss_pred CHHHHHHHHHHHhHHHHHcC
Q 003508 405 SPEEREKRHWHNFTHVTTHT 424 (814)
Q Consensus 405 ~~~er~~r~~~~~~~v~~~~ 424 (814)
++.++++..++++++..+.
T Consensus 325 -~~~~~~~~~~~~~~~~~~~ 343 (350)
T cd03785 325 -PERLKAMAEAARSLARPDA 343 (350)
T ss_pred -HHHHHHHHHHHHhcCCCCH
Confidence 4566767777777665543
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.7e-11 Score=131.28 Aligned_cols=251 Identities=16% Similarity=0.073 Sum_probs=157.6
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccEEeEecHHHHHHHHHHHHHHh
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 187 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~DlIgf~~~~~~~~fl~~~~~~l 187 (814)
++|+|+.|+....+.+.+. .+..+.|+.++.|..+|.. .+.++ ...+|.+...+++. +. +
T Consensus 91 ~pDvv~~~~~~~~~~~~~~-~~~~~~p~v~~~~~~~~~~--------~~r~~--~~~~d~ii~~~~~~---~~----~-- 150 (357)
T PRK00726 91 KPDVVVGFGGYVSGPGGLA-ARLLGIPLVIHEQNAVPGL--------ANKLL--ARFAKKVATAFPGA---FP----E-- 150 (357)
T ss_pred CCCEEEECCCcchhHHHHH-HHHcCCCEEEEcCCCCccH--------HHHHH--HHHhchheECchhh---hh----c--
Confidence 4699999985544433433 3445678877656444320 01111 12356665544321 10 0
Q ss_pred CcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh-CCCeEEEEeccccccCCHHHHH-HHHHHH
Q 003508 188 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQKL-LAFEKF 265 (814)
Q Consensus 188 ~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VgRld~~KGi~~~l-~Af~~l 265 (814)
....++.++|+|||.+.+.+. .. .+.+ .. .+.++|+++|+....|++..++ +|++++
T Consensus 151 ------------~~~~~i~vi~n~v~~~~~~~~----~~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 151 ------------FFKPKAVVTGNPVREEILALA----AP---PARL--AGREGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred ------------cCCCCEEEECCCCChHhhccc----ch---hhhc--cCCCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 123568899999998765431 10 0111 11 3677889999999999987776 888877
Q ss_pred HHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCC
Q 003508 266 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 345 (814)
Q Consensus 266 l~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~ 345 (814)
.. .| ..++++|. ++ .+++. +... . + .. |+ +.|++ +++..+|..||+++.+|
T Consensus 210 ~~-~~-----~~~~~~G~-----g~-~~~~~----~~~~-~----~---~~-v~-~~g~~--~~~~~~~~~~d~~i~~~- 260 (357)
T PRK00726 210 PE-AL-----QVIHQTGK-----GD-LEEVR----AAYA-A----G---IN-AE-VVPFI--DDMAAAYAAADLVICRA- 260 (357)
T ss_pred hh-Cc-----EEEEEcCC-----Cc-HHHHH----HHhh-c----C---Cc-EE-EeehH--hhHHHHHHhCCEEEECC-
Confidence 43 22 23555543 22 12222 2221 2 2 11 44 45665 68999999999999987
Q ss_pred CccCChhHHHHhhhccCCCceEEEeCCCCc--------cccc--CCceEEECCCC--HHHHHHHHHHHhcCCHHHHHHHH
Q 003508 346 RDGMNLVSYEFVACQDLKKGVLILSEFAGA--------AQSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRH 413 (814)
Q Consensus 346 ~EG~~Lv~lEama~~~~~~g~vVlS~~~G~--------~e~l--g~~~~lvnP~d--~~~lA~ai~~~L~~~~~er~~r~ 413 (814)
| +.+++|||+|+ .|+|++...|. ++.+ ...|++++|.| +++++++|.+++++ ++.++.+.
T Consensus 261 --g-~~~~~Ea~~~g----~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~ 332 (357)
T PRK00726 261 --G-ASTVAELAAAG----LPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLEAMA 332 (357)
T ss_pred --C-HHHHHHHHHhC----CCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence 3 58899999994 78888765321 2334 45688999888 99999999999987 45777777
Q ss_pred HHHhHHHHHcCHHHHHHHHHHHH
Q 003508 414 WHNFTHVTTHTAQEWAETFVSEL 436 (814)
Q Consensus 414 ~~~~~~v~~~~~~~W~~~fl~~l 436 (814)
++.+++.+.++..+-++.+++.+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 333 EAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred HHHHhcCCcCHHHHHHHHHHHHh
Confidence 77888777777777777666544
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.7e-10 Score=126.36 Aligned_cols=248 Identities=15% Similarity=0.137 Sum_probs=143.8
Q ss_pred CCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHh--hccEEeEecHHHHHHHHHHHHHH
Q 003508 109 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTRI 186 (814)
Q Consensus 109 ~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll--~~DlIgf~~~~~~~~fl~~~~~~ 186 (814)
+|+|++|......+...+-.+..++|++...+-. -+.+.+..+| +++.+.+. .+|++.-.+....+++++
T Consensus 87 pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~~~~--~~~~r~~~~~~ad~~~~~s~~~~~~l~~----- 158 (365)
T TIGR00236 87 PDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYSPMP--EEINRQLTGHIADLHFAPTEQAKDNLLR----- 158 (365)
T ss_pred CCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCCCCc--cHHHHHHHHHHHHhccCCCHHHHHHHHH-----
Confidence 5999999544443333333333467876432211 1111111122 23323222 257777677766666543
Q ss_pred hCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhC-CCeEEEE-ecccc-ccCCHHHHHHHHH
Q 003508 187 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA-GRKVMLG-VDRLD-MIKGIPQKLLAFE 263 (814)
Q Consensus 187 l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~-~~~vil~-VgRld-~~KGi~~~l~Af~ 263 (814)
.|. ...+|.++++|+....+...... ....++++++ ++.+++. ..|.. ..||+..+++|++
T Consensus 159 ~G~-----------~~~~I~vign~~~d~~~~~~~~~-----~~~~~~~~~~~~~~~vl~~~hr~~~~~k~~~~ll~a~~ 222 (365)
T TIGR00236 159 ENV-----------KADSIFVTGNTVIDALLTNVEIA-----YSSPVLSEFGEDKRYILLTLHRRENVGEPLENIFKAIR 222 (365)
T ss_pred cCC-----------CcccEEEeCChHHHHHHHHHhhc-----cchhHHHhcCCCCCEEEEecCchhhhhhHHHHHHHHHH
Confidence 132 24578899999632322221110 1123444553 3345554 44653 4599999999999
Q ss_pred HHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEEC
Q 003508 264 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 343 (814)
Q Consensus 264 ~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~ 343 (814)
++.+++|++ .++.++.|. +. .+.+ +...++ .. ..|+ +.+.++..++..+|+.||+++.+
T Consensus 223 ~l~~~~~~~----~~vi~~~~~----~~---~~~~---~~~~~~----~~--~~v~-~~~~~~~~~~~~~l~~ad~vv~~ 281 (365)
T TIGR00236 223 EIVEEFEDV----QIVYPVHLN----PV---VREP---LHKHLG----DS--KRVH-LIEPLEYLDFLNLAANSHLILTD 281 (365)
T ss_pred HHHHHCCCC----EEEEECCCC----hH---HHHH---HHHHhC----CC--CCEE-EECCCChHHHHHHHHhCCEEEEC
Confidence 998888765 355444332 11 1222 222221 11 2365 45788999999999999999998
Q ss_pred CCCccCChhHHHHhhhccCCCceEEEeC-CCCccccc-CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHH
Q 003508 344 SLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKR 412 (814)
Q Consensus 344 S~~EG~~Lv~lEama~~~~~~g~vVlS~-~~G~~e~l-g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r 412 (814)
| |.+.+|||+|+ .|+|++. .+|..+.+ ...++++ |.|+++++++|.++++++ +.+.++
T Consensus 282 S-----g~~~~EA~a~g----~PvI~~~~~~~~~e~~~~g~~~lv-~~d~~~i~~ai~~ll~~~-~~~~~~ 341 (365)
T TIGR00236 282 S-----GGVQEEAPSLG----KPVLVLRDTTERPETVEAGTNKLV-GTDKENITKAAKRLLTDP-DEYKKM 341 (365)
T ss_pred C-----hhHHHHHHHcC----CCEEECCCCCCChHHHhcCceEEe-CCCHHHHHHHHHHHHhCh-HHHHHh
Confidence 8 55689999994 7888864 45544444 2345566 579999999999999854 344443
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.4e-10 Score=128.40 Aligned_cols=181 Identities=17% Similarity=0.138 Sum_probs=118.5
Q ss_pred EEeecccChhhhhhhhcCCchHHHHHHHHHHh-CCCeEEEEeccccccCCHHHH-HHHHHHHHHhCccccCceEEEEEec
Q 003508 206 AAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRKVMLGVDRLDMIKGIPQK-LLAFEKFLEENSDWRGKVVLLQIAV 283 (814)
Q Consensus 206 ~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~-~~~~vil~VgRld~~KGi~~~-l~Af~~ll~~~p~~~~~v~Lv~vg~ 283 (814)
.++|+|+|...+.+.. . .+.+ .+ .++++|+++||....|++..+ ++|++++.+. ++ .++.+++
T Consensus 153 ~~i~n~v~~~~~~~~~---~----~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~----~~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLPV---P----RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GI----QIVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhcccc---h----hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--Cc----EEEEECC
Confidence 5789999976554210 0 0111 11 367789999999889997664 4788776542 22 2333332
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCC
Q 003508 284 PTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLK 363 (814)
Q Consensus 284 p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~ 363 (814)
+++. +++++.+.+.+. ..++.+. . .++..+|..||++|.+| | +.+++|||+|+
T Consensus 218 ----~~~~-----~~l~~~~~~~~l-------~~~v~~~---~-~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g--- 270 (348)
T TIGR01133 218 ----KNDL-----EKVKNVYQELGI-------EAIVTFI---D-ENMAAAYAAADLVISRA---G-ASTVAELAAAG--- 270 (348)
T ss_pred ----cchH-----HHHHHHHhhCCc-------eEEecCc---c-cCHHHHHHhCCEEEECC---C-hhHHHHHHHcC---
Confidence 2221 234444443321 1233232 2 27899999999999875 4 68999999995
Q ss_pred CceEEEeCCCCcc-------ccc--CCceEEECCCC--HHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHcCHHHHHH
Q 003508 364 KGVLILSEFAGAA-------QSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 430 (814)
Q Consensus 364 ~g~vVlS~~~G~~-------e~l--g~~~~lvnP~d--~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~ 430 (814)
.|+|++...|.. +.+ +.+|++++|.| +++++++|.+++++ ++.++++.++++++++.+...++++
T Consensus 271 -~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 271 -VPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred -CCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCccHHHHHHh
Confidence 888988775532 344 46789999876 99999999999975 4567777777877777666555543
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.7e-09 Score=125.43 Aligned_cols=182 Identities=13% Similarity=0.111 Sum_probs=125.1
Q ss_pred CCeEEEEeccccccCCHHHHHHHHHHHHH--hCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcc
Q 003508 239 GRKVMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAV 316 (814)
Q Consensus 239 ~~~vil~VgRld~~KGi~~~l~Af~~ll~--~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~ 316 (814)
+..+|.+|.|+...||.+.++.+++++++ ++|+. .+.+|..|.+...+... .++.+.+..++.+ ..|. .
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~g-k~~i~~i~~la~~--~~~~----~ 458 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGEG-KEIIQRIVEFSKR--PEFR----G 458 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccchH-HHHHHHHHHHHhc--ccCC----C
Confidence 45588899999999999999999999975 45552 47788777654433221 2445555555442 0121 1
Q ss_pred cEEEecCCCCHHHHHHHHHhccEEEE-CCC-CccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECC----
Q 003508 317 PIHHLDRSLDFPALCALYAVTDVALV-TSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP---- 388 (814)
Q Consensus 317 ~V~~~~g~v~~~el~aly~~ADv~v~-~S~-~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP---- 388 (814)
.|.|+.+ .+..--..+|..||+++. ||. +|..|+.-+=||.- |.|-.|..-|...+. +.+|+.+.+
T Consensus 459 kv~f~~~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n-----GgL~~sv~DG~~~E~~~~~nGf~f~~~~~~ 532 (601)
T TIGR02094 459 RIVFLEN-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN-----GVLNLSILDGWWGEGYDGDNGWAIGDGEEY 532 (601)
T ss_pred CEEEEcC-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc-----CCceeecccCcccccCCCCcEEEECCCccc
Confidence 4776654 455556688999999999 888 99999999999985 677778777776554 578999985
Q ss_pred --------CCHHHHHHHHHHHh-----cCCH----HHHHHHHHHHhH-HHHHcCHHHHHHHHHHH
Q 003508 389 --------WNITEVANAIARAL-----NMSP----EEREKRHWHNFT-HVTTHTAQEWAETFVSE 435 (814)
Q Consensus 389 --------~d~~~lA~ai~~~L-----~~~~----~er~~r~~~~~~-~v~~~~~~~W~~~fl~~ 435 (814)
.|.++|-++|.+++ +.+. ....+++++++. ....++|.+-++.+.+.
T Consensus 533 ~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~ 597 (601)
T TIGR02094 533 DDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDK 597 (601)
T ss_pred cccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 89999999998877 2211 122333333332 23357888777777654
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.1e-09 Score=122.14 Aligned_cols=243 Identities=15% Similarity=0.059 Sum_probs=140.9
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHH-HHhhccEEeEecHHHHHHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLR-AVLAADLVGFHTYDYARHFVSACTRI 186 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~-~ll~~DlIgf~~~~~~~~fl~~~~~~ 186 (814)
.+|+|++|.+....++..+..+..++|+.++.|.-. +.+ +..|+.. ... ..-.+|.+...+....+++.+
T Consensus 88 ~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~-s~~--~~~~~~~-~r~~~~~~ad~~~~~s~~~~~~l~~----- 158 (363)
T cd03786 88 KPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLR-SFD--RGMPDEE-NRHAIDKLSDLHFAPTEEARRNLLQ----- 158 (363)
T ss_pred CCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccc-cCC--CCCCchH-HHHHHHHHhhhccCCCHHHHHHHHH-----
Confidence 469999998766555555544445788876544211 000 0112111 111 112356555545443333321
Q ss_pred hCcccCCCceeeCCeEEEEEEeeccc-ChhhhhhhhcCCchHHHHHHHHHHh--C-CCeEEEEeccccc---cCCHHHHH
Q 003508 187 LGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETF--A-GRKVMLGVDRLDM---IKGIPQKL 259 (814)
Q Consensus 187 l~~~~~~~~~~~~g~~~~i~v~p~GI-d~~~f~~~~~~~~~~~~~~~lr~~~--~-~~~vil~VgRld~---~KGi~~~l 259 (814)
.| ....+|.++++++ |...+.+.... + ...++.+ . ++.++++++|+.. .||+..++
T Consensus 159 ~G-----------~~~~kI~vign~v~d~~~~~~~~~~-~-----~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~ 221 (363)
T cd03786 159 EG-----------EPPERIFVVGNTMIDALLRLLELAK-K-----ELILELLGLLPKKYILVTLHRVENVDDGEQLEEIL 221 (363)
T ss_pred cC-----------CCcccEEEECchHHHHHHHHHHhhc-c-----chhhhhcccCCCCEEEEEeCCccccCChHHHHHHH
Confidence 12 1345788888885 55443322110 0 1112222 2 3456778999875 79999999
Q ss_pred HHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccE
Q 003508 260 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 339 (814)
Q Consensus 260 ~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv 339 (814)
+|++++... ++.++..+. .+. ++++++.+.+.+.. . ..|+ +.+....+++..+|+.||+
T Consensus 222 ~al~~l~~~------~~~vi~~~~-----~~~----~~~l~~~~~~~~~~---~--~~v~-~~~~~~~~~~~~l~~~ad~ 280 (363)
T cd03786 222 EALAELAEE------DVPVVFPNH-----PRT----RPRIREAGLEFLGH---H--PNVL-LISPLGYLYFLLLLKNADL 280 (363)
T ss_pred HHHHHHHhc------CCEEEEECC-----CCh----HHHHHHHHHhhccC---C--CCEE-EECCcCHHHHHHHHHcCcE
Confidence 999987432 244543332 222 23334444443210 1 1355 4566778899999999999
Q ss_pred EEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcccccCCceEEECCC-CHHHHHHHHHHHhcCCH
Q 003508 340 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPW-NITEVANAIARALNMSP 406 (814)
Q Consensus 340 ~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~~~lvnP~-d~~~lA~ai~~~L~~~~ 406 (814)
+|.+|- | +..|||+|+ .|+|++...+...++.++|+.+.+. |+++++++|.++++++.
T Consensus 281 ~v~~Sg----g-i~~Ea~~~g----~PvI~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 281 VLTDSG----G-IQEEASFLG----VPVLNLRDRTERPETVESGTNVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred EEEcCc----c-HHhhhhhcC----CCEEeeCCCCccchhhheeeEEecCCCHHHHHHHHHHHhcCch
Confidence 999994 4 479999994 7899987656454443566555443 79999999999998753
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.6e-09 Score=122.52 Aligned_cols=262 Identities=11% Similarity=0.082 Sum_probs=153.3
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccEEeEecHHHHHHHHHHHHHHh
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 187 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~DlIgf~~~~~~~~fl~~~~~~l 187 (814)
++|+|+++ +....+..+.++...++|+. ++++-+... + ..+ --.+|.+...+....+.+.+ .
T Consensus 104 kPDvVi~~-~p~~~~~~l~~~~~~~iP~~-~v~td~~~~------~--~w~---~~~~d~~~v~s~~~~~~l~~-----~ 165 (391)
T PRK13608 104 KPDLILLT-FPTPVMSVLTEQFNINIPVA-TVMTDYRLH------K--NWI---TPYSTRYYVATKETKQDFID-----V 165 (391)
T ss_pred CcCEEEEC-CcHHHHHHHHHhcCCCCCEE-EEeCCCCcc------c--ccc---cCCCCEEEECCHHHHHHHHH-----c
Confidence 45898775 23333333333344467774 344443110 0 011 12478777766554443332 1
Q ss_pred CcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhC---CCe-EEEEeccccccCCHHHHHHHHH
Q 003508 188 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRK-VMLGVDRLDMIKGIPQKLLAFE 263 (814)
Q Consensus 188 ~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~---~~~-vil~VgRld~~KGi~~~l~Af~ 263 (814)
|. ...+|.++++.|+. .|.+.. . ...+++.++ +++ +++++||+...||+..+++++
T Consensus 166 gi-----------~~~ki~v~GiPv~~-~f~~~~---~----~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~- 225 (391)
T PRK13608 166 GI-----------DPSTVKVTGIPIDN-KFETPI---D----QKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDI- 225 (391)
T ss_pred CC-----------CHHHEEEECeecCh-Hhcccc---c----HHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHH-
Confidence 22 12356666666664 343221 1 123444442 344 556799999999999999985
Q ss_pred HHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEEC
Q 003508 264 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 343 (814)
Q Consensus 264 ~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~ 343 (814)
++..|+ +.++++++. .+ .+.+++++. .+. . ..|+ +.|++ +++..+|+.||++|..
T Consensus 226 --~~~~~~----~~~vvv~G~----~~---~l~~~l~~~---~~~----~--~~v~-~~G~~--~~~~~~~~~aDl~I~k 280 (391)
T PRK13608 226 --LAKSAN----AQVVMICGK----SK---ELKRSLTAK---FKS----N--ENVL-ILGYT--KHMNEWMASSQLMITK 280 (391)
T ss_pred --HhcCCC----ceEEEEcCC----CH---HHHHHHHHH---hcc----C--CCeE-EEecc--chHHHHHHhhhEEEeC
Confidence 333444 345555431 22 123333332 211 1 1354 45766 5799999999999964
Q ss_pred CCCccCChhHHHHhhhccCCCceEEEeCCCCcccc-----cCCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhH
Q 003508 344 SLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-----LGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFT 418 (814)
Q Consensus 344 S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~-----lg~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~ 418 (814)
+.|+++.|||||+ .|+|++...+..+. +.+.|.-+-+.|.++++++|.++++++ +.+.++.+++++
T Consensus 281 ----~gg~tl~EA~a~G----~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~~~~~l~~~i~~ll~~~-~~~~~m~~~~~~ 351 (391)
T PRK13608 281 ----PGGITISEGLARC----IPMIFLNPAPGQELENALYFEEKGFGKIADTPEEAIKIVASLTNGN-EQLTNMISTMEQ 351 (391)
T ss_pred ----CchHHHHHHHHhC----CCEEECCCCCCcchhHHHHHHhCCcEEEeCCHHHHHHHHHHHhcCH-HHHHHHHHHHHH
Confidence 4588999999994 78888864332221 112333333569999999999999864 566777778888
Q ss_pred HHHHcCHHHHHHHHHHHHHHhHH
Q 003508 419 HVTTHTAQEWAETFVSELNDTVV 441 (814)
Q Consensus 419 ~v~~~~~~~W~~~fl~~l~~~~~ 441 (814)
....+++...++.+++.+.....
T Consensus 352 ~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 352 DKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred hcCCCCHHHHHHHHHHHhhhhhh
Confidence 88888888888888776665443
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.24 E-value=9.1e-11 Score=115.99 Aligned_cols=191 Identities=17% Similarity=0.229 Sum_probs=116.8
Q ss_pred cCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhccc---CceEEc
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---NLWLAA 543 (814)
Q Consensus 467 ~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~---~l~lia 543 (814)
..++||+|+||||++..-+| . .....|.+|.+ .|..|+.||..+...+..+-+.+ +.++|+
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~------------~---pA~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~ia 69 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEW------------Q---PAAPVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQGLPLIA 69 (274)
T ss_pred cceEEEEcccCcccCCCCCC------------C---ccchHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCCCCceee
Confidence 35799999999999964433 2 23456677775 69999999999999987776665 578999
Q ss_pred cCcEEEEeCCCceeecc--c------ccCCh-HHHHHHHHHHHHHhccCCCceee----------------------ecc
Q 003508 544 ENGMFLRCTTGKWMTTM--P------EHLNM-EWVDSLKHVFEYFTERTPRSHFE----------------------QRE 592 (814)
Q Consensus 544 ~hG~~i~~~~~~~~~~~--~------~~~~~-~~~~~v~~i~~~~~~~~~g~~iE----------------------~K~ 592 (814)
|||+.|..+. .|.... + ..... .-.+.+++.++.+.+...-.++. ..+
T Consensus 70 EnG~aI~~p~-~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rE 148 (274)
T COG3769 70 ENGAAIYLPK-GWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLRE 148 (274)
T ss_pred cCCceEEecc-cccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHH
Confidence 9999998432 221100 0 00000 01233333333222211101110 112
Q ss_pred ceEEEEeccCChhhhHHHHHHHHHHHhcCCCCCCceEEEEcCcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEE
Q 003508 593 TSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLC 672 (814)
Q Consensus 593 ~~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~~~~~~v~~g~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~ 672 (814)
++.++-.|..+ +++.++ ...+...++.++.|.....+.-....||.|++.+++.+..- .....++.
T Consensus 149 yseti~~rs~d---------~~~~~~-~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl----~~~r~t~~ 214 (274)
T COG3769 149 YSETIIWRSSD---------ERMAQF-TARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRL----GGARTTLG 214 (274)
T ss_pred hhhheeecccc---------hHHHHH-HHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhc----CceeEEEe
Confidence 23333333221 111122 22223347889999888888888888999999999977521 12345899
Q ss_pred EeCCCCCcHHHHHhccC
Q 003508 673 IGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 673 iGD~d~nDe~mf~~~~~ 689 (814)
+|| +.||.+||+.+..
T Consensus 215 ~GD-g~nD~Pl~ev~d~ 230 (274)
T COG3769 215 LGD-GPNDAPLLEVMDY 230 (274)
T ss_pred cCC-CCCcccHHHhhhh
Confidence 999 9999999998865
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.11 E-value=9.6e-09 Score=119.35 Aligned_cols=275 Identities=12% Similarity=0.092 Sum_probs=171.2
Q ss_pred HHHHHHHHHHHHHHHh----CCCCCEEE--EeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCC--cHHHHHH
Q 003508 90 AYIKANQMFADVVNKH----YKDGDVVW--CHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS--RSDLLRA 161 (814)
Q Consensus 90 ~Y~~vN~~fa~~i~~~----~~~~DiI~--ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~--~~~il~~ 161 (814)
.|...+..++..+.+. ..++|++. .+.-|... +....|..++.+..|+ -+ . |. -+..+..
T Consensus 202 ~f~~~~eLi~efl~~l~~~~~~~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~--~-----~~~~y~~~l~~ 269 (519)
T TIGR03713 202 EYSNMDELIREKFQRYLKVEVKDDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ER--N-----RHHTYLDLYES 269 (519)
T ss_pred EECCHHHHHHHHHHHHHHhhCCCCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Cc--c-----cccchhhhhhC
Confidence 3444455555444333 56778877 56556555 3333343334445555 11 1 21 2456666
Q ss_pred HhhccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCe
Q 003508 162 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRK 241 (814)
Q Consensus 162 ll~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~ 241 (814)
+..+|.|...|.+-.+........ .. ...+|..+|.+.- . .... ..++..+..
T Consensus 270 ~~~~d~iIv~T~~q~~~l~~~~~~------------~~-~~~~v~~Ip~~~~-~-~~~~------------~s~r~~~~~ 322 (519)
T TIGR03713 270 LSRADLIIVDREDIERLLEENYRE------------NY-VEFDISRITPFDT-R-LRLG------------QSQQLYETE 322 (519)
T ss_pred hhhcCeEEEcCHHHHHHHHHHhhh------------cc-cCCcceeeCccce-E-EecC------------hhhcccceE
Confidence 777887776665433332211110 00 1234555676544 1 1110 001123445
Q ss_pred EEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCC-------
Q 003508 242 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT------- 314 (814)
Q Consensus 242 vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~------- 314 (814)
|.+++||| +.|-+..+|+|+.++.+++|+. .|.+.|... .. ++.+.++++++++|..++...
T Consensus 323 I~v~idrL-~ek~~~~~I~av~~~~~~~p~~----~L~~~gy~~---~~---~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 391 (519)
T TIGR03713 323 IGFWIDGL-SDEELQQILQQLLQYILKNPDY----ELKILTYNN---DN---DITQLLEDILEQINEEYNQDKNFFSLSE 391 (519)
T ss_pred EEEEcCCC-ChHHHHHHHHHHHHHHhhCCCe----EEEEEEecC---ch---hHHHHHHHHHHHHHhhhchhhhccccch
Confidence 55666699 9999999999999999999985 466555432 11 235566777777765532210
Q ss_pred ---------------cccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc
Q 003508 315 ---------------AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL 379 (814)
Q Consensus 315 ---------------~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l 379 (814)
-...+.|.|..+..++...|..|.++|.+|..|||+ ..+|||+.| .|.| .-|.++.+
T Consensus 392 ~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~G----iPqI---nyg~~~~V 463 (519)
T TIGR03713 392 QDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAG----IPQI---NKVETDYV 463 (519)
T ss_pred hhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcC----CCee---ecCCceee
Confidence 002344678888889999999999999999999999 999999983 5555 66667777
Q ss_pred --CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHcCH
Q 003508 380 --GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTA 425 (814)
Q Consensus 380 --g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~~ 425 (814)
|.+|++| .|..+|++||..+|..+. ...+......+.+.+++.
T Consensus 464 ~d~~NG~li--~d~~~l~~al~~~L~~~~-~wn~~~~~sy~~~~~yS~ 508 (519)
T TIGR03713 464 EHNKNGYII--DDISELLKALDYYLDNLK-NWNYSLAYSIKLIDDYSS 508 (519)
T ss_pred EcCCCcEEe--CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhhH
Confidence 7899999 799999999999998653 444555555555555543
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.11 E-value=5e-10 Score=106.39 Aligned_cols=130 Identities=25% Similarity=0.313 Sum_probs=89.4
Q ss_pred CeEEEEeccccccCCHHHHHH-HHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003508 240 RKVMLGVDRLDMIKGIPQKLL-AFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 318 (814)
Q Consensus 240 ~~vil~VgRld~~KGi~~~l~-Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V 318 (814)
-.+|+++|++.+.||+..+++ |++++.+++|+ +.|+++|. +++ +++++ .. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~----~~l~i~G~-----~~~------~l~~~-~~----------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPD----IELIIIGN-----GPD------ELKRL-RR----------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTT----EEEEEECE-----SS-------HHCCH-HH----------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcC----EEEEEEeC-----CHH------HHHHh-cC----------CCE
Confidence 357899999999999999999 99999999986 55777764 222 12222 11 246
Q ss_pred EEecCCCCHHHHHHHHHhccEEEECCC-CccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHH
Q 003508 319 HHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 395 (814)
Q Consensus 319 ~~~~g~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA 395 (814)
++ .|.+ +++..+|+.||+++.|+. .++++..++|||++| .|+|+|.. |..+.+ ...++++ +.|+++++
T Consensus 56 ~~-~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G----~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~ 126 (135)
T PF13692_consen 56 RF-HGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAG----KPVIASDN-GAEGIVEEDGCGVLV-ANDPEELA 126 (135)
T ss_dssp EE-E-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT------EEEEHH-HCHCHS---SEEEE--TT-HHHHH
T ss_pred EE-cCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhC----CCEEECCc-chhhheeecCCeEEE-CCCHHHHH
Confidence 64 5777 689999999999999984 789999999999994 78888888 555554 2456666 88999999
Q ss_pred HHHHHHhcC
Q 003508 396 NAIARALNM 404 (814)
Q Consensus 396 ~ai~~~L~~ 404 (814)
++|.+++++
T Consensus 127 ~~i~~l~~d 135 (135)
T PF13692_consen 127 EAIERLLND 135 (135)
T ss_dssp HHHHHHHH-
T ss_pred HHHHHHhcC
Confidence 999999853
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.4e-08 Score=114.07 Aligned_cols=150 Identities=19% Similarity=0.173 Sum_probs=97.6
Q ss_pred HHHHhC---CCeEE-EEec-cccccC-CHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHh
Q 003508 233 LQETFA---GRKVM-LGVD-RLDMIK-GIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 306 (814)
Q Consensus 233 lr~~~~---~~~vi-l~Vg-Rld~~K-Gi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~i 306 (814)
+++.++ ++++| +..| |....| +++.+++|++.+.+++|++ .+++++. +.+ .++++++++.+.
T Consensus 176 ~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~----~~ii~~~----~~~----~~~~~~~~~~~~ 243 (380)
T PRK00025 176 ARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDL----RFVLPLV----NPK----RREQIEEALAEY 243 (380)
T ss_pred HHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCe----EEEEecC----Chh----hHHHHHHHHhhc
Confidence 455553 44543 4444 666654 4788999999998887764 4665543 122 133344444332
Q ss_pred hcccCCCCcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEe----------------
Q 003508 307 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS---------------- 370 (814)
Q Consensus 307 N~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS---------------- 370 (814)
. |. .+.++. .++..+|+.||++|.+| |.+.+|+|+|+ .|+|++
T Consensus 244 ~---~~----~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G----~PvI~~~~~~~~~~~~~~~~~~ 302 (380)
T PRK00025 244 A---GL----EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLK----VPMVVGYKVSPLTFWIAKRLVK 302 (380)
T ss_pred C---CC----CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhC----CCEEEEEccCHHHHHHHHHHHc
Confidence 0 11 244332 37899999999999998 78889999994 788887
Q ss_pred -CCCCcccccCC----ceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 003508 371 -EFAGAAQSLGA----GAILVNPWNITEVANAIARALNMSPEEREKRHWHN 416 (814)
Q Consensus 371 -~~~G~~e~lg~----~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~ 416 (814)
.+.|.++.+.. .+++.+..|+++++++|.++|+++ +.++++.++.
T Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~ 352 (380)
T PRK00025 303 VPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADG-ARRQALLEGF 352 (380)
T ss_pred CCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH-HHHHHHHHHH
Confidence 44455555522 346778889999999999999865 3555554443
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.7e-08 Score=110.09 Aligned_cols=239 Identities=14% Similarity=0.028 Sum_probs=142.3
Q ss_pred HHHhCCCCCEEEEeCccchh--H-HHHHHh-hCCCCeEEEEEecCCCchhhhccCC-CcHHHHHHHhhccEEeEecHHHH
Q 003508 102 VNKHYKDGDVVWCHDYHLMF--L-PKCLKE-YNSDMKVGWFLHTPFPSSEIHRTLP-SRSDLLRAVLAADLVGFHTYDYA 176 (814)
Q Consensus 102 i~~~~~~~DiI~ihdyhl~l--l-p~~lr~-~~~~~~i~~f~H~Pfp~~e~~~~lp-~~~~il~~ll~~DlIgf~~~~~~ 176 (814)
++..++++|+|++|....+. + ..++++ +..++++++++|--+|.. +.... ........+-.+|.|..++....
T Consensus 58 ~~~~~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHHH
Confidence 55567899999999854432 1 222222 122699999999866531 11111 12233344557899999888655
Q ss_pred HHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEeccccccCCHH
Q 003508 177 RHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIP 256 (814)
Q Consensus 177 ~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~KGi~ 256 (814)
+.+.+ .|.. ..++.++++..+...... +.....++.|+|+||+....++.
T Consensus 136 ~~l~~-----~g~~-----------~~~i~~~~~~~~~~~~~~--------------~~~~~~~~~i~yaG~l~k~~~l~ 185 (333)
T PRK09814 136 DRLVE-----EGLT-----------TDKIIVQGIFDYLNDIEL--------------VKTPSFQKKINFAGNLEKSPFLK 185 (333)
T ss_pred HHHHH-----cCCC-----------cCceEecccccccccccc--------------cccccCCceEEEecChhhchHHH
Confidence 44432 1221 223444444332211100 01123456899999999433211
Q ss_pred HHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 003508 257 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 336 (814)
Q Consensus 257 ~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ 336 (814)
+..|+ +.|+++|. +++.. .. ...|+ +.|.++.+++..+|+.
T Consensus 186 ----------~~~~~----~~l~i~G~-----g~~~~-----------~~--------~~~V~-f~G~~~~eel~~~l~~ 226 (333)
T PRK09814 186 ----------NWSQG----IKLTVFGP-----NPEDL-----------EN--------SANIS-YKGWFDPEELPNELSK 226 (333)
T ss_pred ----------hcCCC----CeEEEECC-----Ccccc-----------cc--------CCCeE-EecCCCHHHHHHHHhc
Confidence 12343 45776663 22110 00 12466 4689999999999988
Q ss_pred ccEEEECCC-----------CccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhc
Q 003508 337 TDVALVTSL-----------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 403 (814)
Q Consensus 337 ADv~v~~S~-----------~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~ 403 (814)
|+.+++.- .-.++--..|||||| .|+|++..++.++.+ +..|++|+ +.++++++|..+
T Consensus 227 -~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G----~PVI~~~~~~~~~~V~~~~~G~~v~--~~~el~~~l~~~-- 297 (333)
T PRK09814 227 -GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG----LPVIVWSKAAIADFIVENGLGFVVD--SLEELPEIIDNI-- 297 (333)
T ss_pred -CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC----CCEEECCCccHHHHHHhCCceEEeC--CHHHHHHHHHhc--
Confidence 66555431 123444588999994 899999999999888 56899998 678999999874
Q ss_pred CCHHHHHHHHHHHhHHHH
Q 003508 404 MSPEEREKRHWHNFTHVT 421 (814)
Q Consensus 404 ~~~~er~~r~~~~~~~v~ 421 (814)
+++++.++.++.++..+
T Consensus 298 -~~~~~~~m~~n~~~~~~ 314 (333)
T PRK09814 298 -TEEEYQEMVENVKKISK 314 (333)
T ss_pred -CHHHHHHHHHHHHHHHH
Confidence 35666666666665544
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.2e-07 Score=113.73 Aligned_cols=180 Identities=17% Similarity=0.122 Sum_probs=121.4
Q ss_pred EEEEeccccccCCHHHHHHHHHHHHH--hCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEE
Q 003508 242 VMLGVDRLDMIKGIPQKLLAFEKFLE--ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 319 (814)
Q Consensus 242 vil~VgRld~~KGi~~~l~Af~~ll~--~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~ 319 (814)
+|.++.|+..-|+..++++.+++|.+ .+|+ ..+.+|..|.+...+.+ -.++.+++.+++..- +|. ..|+
T Consensus 480 tigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~p--~~~----~kVv 550 (778)
T cd04299 480 TIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEP-GKELIQEIVEFSRRP--EFR----GRIV 550 (778)
T ss_pred EEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchH-HHHHHHHHHHHHhCc--CCC----CcEE
Confidence 78899999999999999999999865 2444 24788877765444322 134445555554310 221 1477
Q ss_pred EecCCCCHHHHHHHHHhccEEEECCC--CccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECC-------
Q 003508 320 HLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP------- 388 (814)
Q Consensus 320 ~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP------- 388 (814)
|+.+ .+..--..++..|||++.||. +|..|+.-+=||.- |.+-+|..-|...+. |.+|..+.+
T Consensus 551 fle~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N-----G~LnlSvlDGww~E~~~g~nGwaig~~~~~~~~ 624 (778)
T cd04299 551 FLED-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN-----GGLNLSVLDGWWDEGYDGENGWAIGDGDEYEDD 624 (778)
T ss_pred EEcC-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc-----CCeeeecccCccccccCCCCceEeCCCccccCh
Confidence 7654 455556688999999999999 99999999999885 788899888877665 788999988
Q ss_pred -----CCHHHHHHHHHHHhc----C------CHHHHHHHHHHHh-HHHHHcCHHHHHHHHHHHHH
Q 003508 389 -----WNITEVANAIARALN----M------SPEEREKRHWHNF-THVTTHTAQEWAETFVSELN 437 (814)
Q Consensus 389 -----~d~~~lA~ai~~~L~----~------~~~er~~r~~~~~-~~v~~~~~~~W~~~fl~~l~ 437 (814)
.|.++|-+.|.+.+- . |. +..+++++.. ...-.|++.+-++.|++.+.
T Consensus 625 ~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~-~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 625 EYQDAEEAEALYDLLENEVIPLFYDRDEGGYPP-GWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCH-HHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 455556666644332 1 22 2333333332 22445677777777766665
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.6e-07 Score=107.24 Aligned_cols=303 Identities=17% Similarity=0.185 Sum_probs=151.2
Q ss_pred EEEEeCccchhHHHHHHhhCCCCeEEEEEecCCC-------chhhhccCCC---c-----------HHHHHH-HhhccEE
Q 003508 111 VVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFP-------SSEIHRTLPS---R-----------SDLLRA-VLAADLV 168 (814)
Q Consensus 111 iI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp-------~~e~~~~lp~---~-----------~~il~~-ll~~DlI 168 (814)
+.|.|.|..-+-..++|++.|.+.-.|+.|.--+ ..++|..|+. . ..+-+. ...||..
T Consensus 146 iaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvF 225 (633)
T PF05693_consen 146 IAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVF 225 (633)
T ss_dssp EEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEE
T ss_pred EEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCee
Confidence 4567888777777788999999999999996432 1223334431 0 011111 2234444
Q ss_pred eEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhc----CCchHHHHHHH-HHHh-C----
Q 003508 169 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALE----INPVQVHIKEL-QETF-A---- 238 (814)
Q Consensus 169 gf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~----~~~~~~~~~~l-r~~~-~---- 238 (814)
.+.+.--+ ..|..+|+ |..-+ |.|||+|.+.|...-. ....++++..+ +..+ +
T Consensus 226 TTVSeITa----~Ea~~LL~------------r~pDv-V~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~df 288 (633)
T PF05693_consen 226 TTVSEITA----KEAEHLLK------------RKPDV-VTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDF 288 (633)
T ss_dssp EESSHHHH----HHHHHHHS------------S--SE-E----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S
T ss_pred eehhhhHH----HHHHHHhC------------CCCCE-EcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 33332111 12333443 22222 5799999887653210 01122333332 2222 1
Q ss_pred --CCeE-EEEecccc-ccCCHHHHHHHHHHHHHh--CccccCceEEEEEecCCCCCh---H------HHHHHHHHHHHHH
Q 003508 239 --GRKV-MLGVDRLD-MIKGIPQKLLAFEKFLEE--NSDWRGKVVLLQIAVPTRTDV---P------EYQRLTSQVHEIV 303 (814)
Q Consensus 239 --~~~v-il~VgRld-~~KGi~~~l~Af~~ll~~--~p~~~~~v~Lv~vg~p~r~~~---~------~~~~l~~~l~~lv 303 (814)
++.+ |...||.+ ..||++..|+|+.+|-.. .-.....|+-. +-.|+.... + -+.+|++.+.++.
T Consensus 289 d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaF-ii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~ 367 (633)
T PF05693_consen 289 DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAF-IIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQ 367 (633)
T ss_dssp -GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEE-EE---SEEEE-HHHHHHHHHHHHHHHHHHHHH
T ss_pred CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEE-EEecCccCCcCHHHHhhHHHHHHHHHHHHHHH
Confidence 3444 44599999 679999999999987432 11111123322 334544321 1 1122333232222
Q ss_pred HHhhcc---------------------------------------------------------------cCCCCcccEEE
Q 003508 304 GRINGR---------------------------------------------------------------FGTLTAVPIHH 320 (814)
Q Consensus 304 ~~iN~~---------------------------------------------------------------~g~~~~~~V~~ 320 (814)
++|+.+ -...+.+.|+|
T Consensus 368 ~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF 447 (633)
T PF05693_consen 368 EKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIF 447 (633)
T ss_dssp HHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE
T ss_pred HHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEE
Confidence 222100 00123345666
Q ss_pred ecCCCCH------HHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc-------CCceEE-E
Q 003508 321 LDRSLDF------PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-------GAGAIL-V 386 (814)
Q Consensus 321 ~~g~v~~------~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l-------g~~~~l-v 386 (814)
...+++. -++..+.+.+|+.|+||+||++|.+++|+.|.+ .|-|.|+.+|....+ ...|+. |
T Consensus 448 ~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~g----VPsITTnLsGFG~~~~~~~~~~~~~GV~Vv 523 (633)
T PF05693_consen 448 HPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFG----VPSITTNLSGFGCWMQEHIEDPEEYGVYVV 523 (633)
T ss_dssp --S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT------EEEETTBHHHHHHHTTS-HHGGGTEEEE
T ss_pred eeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcC----CceeeccchhHHHHHHHhhccCcCCcEEEE
Confidence 5544443 467889999999999999999999999999994 899999999988554 134554 4
Q ss_pred CC--CC----HHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHH
Q 003508 387 NP--WN----ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSE 435 (814)
Q Consensus 387 nP--~d----~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 435 (814)
+= .+ ++++++.|.+...++..+|.....+..+.-...+|.+-..-+.+.
T Consensus 524 dR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~A 578 (633)
T PF05693_consen 524 DRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKA 578 (633)
T ss_dssp -SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 32 23 356777777888888777766655555555555666555555443
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.60 E-value=6.2e-06 Score=93.09 Aligned_cols=135 Identities=16% Similarity=0.119 Sum_probs=84.7
Q ss_pred CCeEEEE--eccccc-cCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCc
Q 003508 239 GRKVMLG--VDRLDM-IKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 315 (814)
Q Consensus 239 ~~~vil~--VgRld~-~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~ 315 (814)
++++|+. .+|..+ .|+++.+++|++.+.+++|+++ +++.+.+. .. .+.++++....+ . .
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~----~~~~~~~~~~~~----~-~- 251 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KR----RLQFEQIKAEYG----P-D- 251 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hh----HHHHHHHHHHhC----C-C-
Confidence 5565543 359888 7999999999999988888753 44333221 11 122233333322 1 1
Q ss_pred ccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeC-----------------CCCcccc
Q 003508 316 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-----------------FAGAAQS 378 (814)
Q Consensus 316 ~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~-----------------~~G~~e~ 378 (814)
..|.++.+ +...+|++||++|.+| |.+.+|+|+|+ .|+|++- +.+.+..
T Consensus 252 ~~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G----~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~ni 317 (385)
T TIGR00215 252 LQLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIK----TPMVVGYRMKPLTFLIARRLVKTDYISLPNI 317 (385)
T ss_pred CcEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcC----CCEEEEEcCCHHHHHHHHHHHcCCeeeccHH
Confidence 13544433 3457999999999999 77888999995 7888872 2222222
Q ss_pred c-CCceE--EE-CCCCHHHHHHHHHHHhcCC
Q 003508 379 L-GAGAI--LV-NPWNITEVANAIARALNMS 405 (814)
Q Consensus 379 l-g~~~~--lv-nP~d~~~lA~ai~~~L~~~ 405 (814)
+ +.+++ ++ +-.+++.+++++.++|.++
T Consensus 318 l~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 318 LANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred hcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 2 22221 12 3357889999999999876
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=98.60 E-value=7.7e-07 Score=90.04 Aligned_cols=171 Identities=18% Similarity=0.285 Sum_probs=103.2
Q ss_pred HHHHHHHhhcCCCceEEEEcCCChHHHHHhhc-cc----CceEEccCcEEEEeCCC-ceeecccccCChH-HHHHHHHHH
Q 003508 504 LKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ-EY----NLWLAAENGMFLRCTTG-KWMTTMPEHLNME-WVDSLKHVF 576 (814)
Q Consensus 504 ~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~-~~----~l~lia~hG~~i~~~~~-~~~~~~~~~~~~~-~~~~v~~i~ 576 (814)
+.+.|.+|.+ ...|+||||-++..+++.+. .. -.++.++||..+...++ .|...+.+....+ ..+.+.-++
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 4678899986 79999999999999998884 32 24789999998875443 4533221111111 112222222
Q ss_pred HHHhc----cCCCceeeeccceEEEEe--ccCChh----hhH----HH-HHHHHHHHhcCCCCCCceEEEE-cCcEEEEE
Q 003508 577 EYFTE----RTPRSHFEQRETSLVWNY--KYADVE----FGR----IQ-ARDMLQHLWTGPISNASVEVVQ-GSKSVEVR 640 (814)
Q Consensus 577 ~~~~~----~~~g~~iE~K~~~v~~hy--r~~d~e----~~~----~~-a~~l~~~l~~~~~~~~~~~v~~-g~~~vEI~ 640 (814)
++..+ ...|.+||.++..+.+.- |+|+.+ |.. .. -+.+.+.| ++.+...++++.. |.-.++|.
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L-~~~f~d~~L~~siGGqiSiDvf 157 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEAL-KKEFPDFGLTFSIGGQISIDVF 157 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHH-HHHTCCCSEEEEEETTTEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHH-HHHCCCCceEEecCCceEEccc
Confidence 22221 145899999999998863 444322 111 11 13455566 4445556787755 56899999
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeC---CCCCcHHHHHh
Q 003508 641 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH---FLGKDEDVYAF 686 (814)
Q Consensus 641 p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD---~d~nDe~mf~~ 686 (814)
|+||+|.-++++|.+. ..+.+++||| .+-||.++|..
T Consensus 158 p~GwDKty~Lr~l~~~---------~~~~I~FfGDkt~pGGNDyei~~~ 197 (220)
T PF03332_consen 158 PKGWDKTYCLRHLEDE---------GFDEIHFFGDKTFPGGNDYEIFED 197 (220)
T ss_dssp ETT-SGGGGGGGTTTT---------T-SEEEEEESS-STTSTTHHHHHS
T ss_pred cCCccHHHHHHHHHhc---------ccceEEEEehhccCCCCCceeeec
Confidence 9999999999988553 2689999999 23467666654
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.6e-06 Score=84.92 Aligned_cols=184 Identities=18% Similarity=0.264 Sum_probs=122.1
Q ss_pred HHHhccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhccc--C-
Q 003508 462 RYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--N- 538 (814)
Q Consensus 462 ~y~~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~--~- 538 (814)
++++...-|+.||.||||++. ...++|++.+.|++|.. ...+-+|-|-+++-+.+.++.- +
T Consensus 5 a~~r~~~~l~lfdvdgtLt~~--------------r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~ 68 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTPP--------------RQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEE 68 (252)
T ss_pred hhhcCCceEEEEecCCccccc--------------cccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhh
Confidence 455566679999999999986 46789999999999876 7899999999998888887543 2
Q ss_pred -ceEEccCcEEEEeCCCceeecccccCChHHH--HHHHHHH----HHHhc----cCCCceeeeccceEEEE--eccCChh
Q 003508 539 -LWLAAENGMFLRCTTGKWMTTMPEHLNMEWV--DSLKHVF----EYFTE----RTPRSHFEQRETSLVWN--YKYADVE 605 (814)
Q Consensus 539 -l~lia~hG~~i~~~~~~~~~~~~~~~~~~~~--~~v~~i~----~~~~~----~~~g~~iE~K~~~v~~h--yr~~d~e 605 (814)
.+..+|||..-...++... ...-..|. +.+++++ +++.+ ...|.+||-++-.+-+. =|++..|
T Consensus 69 fDY~F~ENGl~~yk~gk~~~----~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~E 144 (252)
T KOG3189|consen 69 FDYVFSENGLVAYKGGKLLS----KQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQE 144 (252)
T ss_pred hcccccCCCeeEeeCCcchh----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHH
Confidence 4678999998765443311 00111222 1222222 33322 14588899877666553 2444322
Q ss_pred ----hhH-----HHHHHHHHHHhcCCCCCCceEEEEc-CcEEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeC
Q 003508 606 ----FGR-----IQARDMLQHLWTGPISNASVEVVQG-SKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 675 (814)
Q Consensus 606 ----~~~-----~~a~~l~~~l~~~~~~~~~~~v~~g-~~~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD 675 (814)
|.. ..-+.+.+.| ++-+...++....| .-.++|-|.||+|--.++.+-+. + .+.+-+|||
T Consensus 145 ER~eF~e~Dkk~~iR~K~v~~L-r~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-g--------f~~IhFFGD 214 (252)
T KOG3189|consen 145 ERNEFEELDKKHKIREKFVEAL-REEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-G--------FDTIHFFGD 214 (252)
T ss_pred HHHHHHHhhhhhhhHHHHHHHH-HHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-C--------CceEEEecc
Confidence 211 1123455566 54456667776544 56799999999999999988554 3 688999999
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.2e-07 Score=81.43 Aligned_cols=88 Identities=28% Similarity=0.341 Sum_probs=73.0
Q ss_pred EEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 003508 339 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 416 (814)
Q Consensus 339 v~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~ 416 (814)
|++-|+..+|+++..+|+|||| +|+|.+...+..+.+ |..++.++ |+++++++|..+|++| ++++++.+++
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G----~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~-~~~~~ia~~a 73 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACG----TPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENP-EERRRIAKNA 73 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCC----CeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCH-HHHHHHHHHH
Confidence 4677888999999999999994 677777777888777 55688888 9999999999999965 6888888999
Q ss_pred hHHHH-HcCHHHHHHHHH
Q 003508 417 FTHVT-THTAQEWAETFV 433 (814)
Q Consensus 417 ~~~v~-~~~~~~W~~~fl 433 (814)
+++|. .|++.+-++.||
T Consensus 74 ~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 74 RERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 98887 777777676665
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.52 E-value=2.6e-07 Score=86.73 Aligned_cols=62 Identities=18% Similarity=0.280 Sum_probs=47.7
Q ss_pred EEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC
Q 003508 470 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 538 (814)
Q Consensus 470 li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~ 538 (814)
+++||+||||++...... ......+.+++.+.|++|.++ +..++|+|||....+..++...+
T Consensus 1 ~~vfD~D~tl~~~~~~~~------~~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~~~~ 62 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIA------EIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLEELG 62 (139)
T ss_pred CeEEccCCceEccCcccc------ccccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHHHcC
Confidence 479999999998632100 001246789999999999984 89999999999999988887643
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.7e-06 Score=83.51 Aligned_cols=77 Identities=13% Similarity=0.083 Sum_probs=53.1
Q ss_pred EEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHH---Hhhcc-------cC-
Q 003508 470 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQE-------YN- 538 (814)
Q Consensus 470 li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~---~~~~~-------~~- 538 (814)
++++|+||||+..... +. ..... ....+++.+.+++++|++ .|+.|+++|||+..... +++.. ++
T Consensus 1 iVisDIDGTL~~sd~~-~~-~~~~~-~~~~~~~~~~~a~~~l~~-~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~ 76 (157)
T smart00775 1 IVISDIDGTITKSDVL-GH-VVPII-GKDWTHPGVAKLYRDIQN-NGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH 76 (157)
T ss_pred CEEEecCCCCcccccc-cc-ccccc-ccCcCCHHHHHHHHHHHH-cCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC
Confidence 4899999999976200 00 00000 014678999999999998 69999999999998874 66655 11
Q ss_pred ceEEccCcEEEE
Q 003508 539 LWLAAENGMFLR 550 (814)
Q Consensus 539 l~lia~hG~~i~ 550 (814)
.++++.||+.+.
T Consensus 77 g~li~~~g~~~~ 88 (157)
T smart00775 77 GPVLLSPDRLFA 88 (157)
T ss_pred ceEEEcCCcchh
Confidence 356777776653
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.17 E-value=7.5e-06 Score=80.17 Aligned_cols=38 Identities=26% Similarity=0.115 Sum_probs=33.2
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 645 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 645 nKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
+|..++++++++++ .+++.++++|| +.||.+|++.++-
T Consensus 76 ~k~~~~~~~~~~~~------~~~~~~~~vGD-s~~D~~~~~~ag~ 113 (154)
T TIGR01670 76 NKLIAFSDILEKLA------LAPENVAYIGD-DLIDWPVMEKVGL 113 (154)
T ss_pred chHHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 48889999999987 46789999999 9999999998854
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.0021 Score=71.21 Aligned_cols=231 Identities=20% Similarity=0.253 Sum_probs=145.5
Q ss_pred cHHHHHHHh-hccEEeEecHHHHHHHHHHHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHH
Q 003508 155 RSDLLRAVL-AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKEL 233 (814)
Q Consensus 155 ~~~il~~ll-~~DlIgf~~~~~~~~fl~~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~l 233 (814)
.+.+.+.|+ ..|+|..|+..+.+.|.+ ||... +..-|. .|. .+.+ .+........+
T Consensus 167 ~~~~~~~~~~~i~li~aQse~D~~Rf~~-----LGa~~----v~v~GN-lKf-----d~~~--------~~~~~~~~~~~ 223 (419)
T COG1519 167 LKFLARLLFKNIDLILAQSEEDAQRFRS-----LGAKP----VVVTGN-LKF-----DIEP--------PPQLAAELAAL 223 (419)
T ss_pred HHHHHHHHHHhcceeeecCHHHHHHHHh-----cCCcc----eEEecc-eee-----cCCC--------ChhhHHHHHHH
Confidence 456777766 469999999999999975 45321 111110 111 1111 12223456678
Q ss_pred HHHhCC-CeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCC
Q 003508 234 QETFAG-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 312 (814)
Q Consensus 234 r~~~~~-~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~ 312 (814)
|.++++ +++++..+.. ..--...++++..+++++|+. .||.| | +.|| --+.+++++.+.|-+++.
T Consensus 224 r~~l~~~r~v~iaaSTH--~GEeei~l~~~~~l~~~~~~~----llIlV--P---RHpE---Rf~~v~~l~~~~gl~~~~ 289 (419)
T COG1519 224 RRQLGGHRPVWVAASTH--EGEEEIILDAHQALKKQFPNL----LLILV--P---RHPE---RFKAVENLLKRKGLSVTR 289 (419)
T ss_pred HHhcCCCCceEEEecCC--CchHHHHHHHHHHHHhhCCCc----eEEEe--c---CChh---hHHHHHHHHHHcCCeEEe
Confidence 888876 8999998882 333344788999999999975 23322 3 2343 356778888888765543
Q ss_pred CCc-------ccEEEecCCCCHHHHHHHHHhccEEEECC-C--CccCChhHHHHhhhccCCCceEEEe----CCCCcccc
Q 003508 313 LTA-------VPIHHLDRSLDFPALCALYAVTDVALVTS-L--RDGMNLVSYEFVACQDLKKGVLILS----EFAGAAQS 378 (814)
Q Consensus 313 ~~~-------~~V~~~~g~v~~~el~aly~~ADv~v~~S-~--~EG~~Lv~lEama~~~~~~g~vVlS----~~~G~~e~ 378 (814)
-.. ++|. +.. +.-||..+|+.|||+.+-- + .-|.| ++|+.+++ .|+|.- .+.-+++.
T Consensus 290 rS~~~~~~~~tdV~-l~D--tmGEL~l~y~~adiAFVGGSlv~~GGHN--~LEpa~~~----~pvi~Gp~~~Nf~ei~~~ 360 (419)
T COG1519 290 RSQGDPPFSDTDVL-LGD--TMGELGLLYGIADIAFVGGSLVPIGGHN--PLEPAAFG----TPVIFGPYTFNFSDIAER 360 (419)
T ss_pred ecCCCCCCCCCcEE-EEe--cHhHHHHHHhhccEEEECCcccCCCCCC--hhhHHHcC----CCEEeCCccccHHHHHHH
Confidence 211 2343 222 4579999999999988743 3 45666 78999994 666654 44444544
Q ss_pred c-C-CceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHcCHHHHHHHHHHHH
Q 003508 379 L-G-AGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 436 (814)
Q Consensus 379 l-g-~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 436 (814)
+ . .+++.|+. .+.++.++..++.+ +++|.++.+++.+.+..+ +.-.++.+..|
T Consensus 361 l~~~ga~~~v~~--~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~~--~gal~r~l~~l 415 (419)
T COG1519 361 LLQAGAGLQVED--ADLLAKAVELLLAD-EDKREAYGRAGLEFLAQN--RGALARTLEAL 415 (419)
T ss_pred HHhcCCeEEECC--HHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHh--hHHHHHHHHHh
Confidence 4 2 45677764 77777777777765 678888888888888765 23334444433
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=6.7e-06 Score=82.94 Aligned_cols=37 Identities=24% Similarity=0.106 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 646 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 646 KG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
|..++++++++++ .+++.+++||| +.||.+|++.++-
T Consensus 97 k~~~l~~~~~~~g------l~~~ev~~VGD-s~~D~~~a~~aG~ 133 (183)
T PRK09484 97 KLIAFSDLLEKLA------IAPEQVAYIGD-DLIDWPVMEKVGL 133 (183)
T ss_pred HHHHHHHHHHHhC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 6688999999987 56889999999 9999999999975
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.03 E-value=7.1e-05 Score=85.39 Aligned_cols=121 Identities=14% Similarity=0.203 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003508 256 PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYA 335 (814)
Q Consensus 256 ~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~ 335 (814)
...|+|++.+.+..|++. |=+ |.++ . +..+|.+| .+ | ..|+.+.+. ....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~~----y-----~nvvly~~~-~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-DK----Y-----DNVKLYPNI-TTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-Hh----c-----CCcEEECCc-ChHHHHHHHH
Confidence 899999999999999964 543 4332 1 12344455 32 2 235555554 4567889999
Q ss_pred hccEEEECCCCccCChhHHHHhhhccCCCceEEEe-C-CCCcccccCCceEEECCCCHHHHHHHHHHHhcCCH
Q 003508 336 VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-E-FAGAAQSLGAGAILVNPWNITEVANAIARALNMSP 406 (814)
Q Consensus 336 ~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS-~-~~G~~e~lg~~~~lvnP~d~~~lA~ai~~~L~~~~ 406 (814)
.||+++.+|..|||++.+.||+.. |.||+| + ..|-.+.+ ..|.++++.|+++|+++|.++|+++.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~-----G~pI~afd~t~~~~~~i-~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY-----NLLILGFEETAHNRDFI-ASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc-----CCcEEEEecccCCcccc-cCCceecCCCHHHHHHHHHHHhcCHH
Confidence 999999999999999999999997 555555 3 34555555 55899999999999999999998774
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.2e-05 Score=75.40 Aligned_cols=54 Identities=13% Similarity=0.112 Sum_probs=41.6
Q ss_pred eEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHH
Q 003508 469 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 531 (814)
Q Consensus 469 ~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~ 531 (814)
|+|++|+||||+.....|- ....+.++++++|++|.+ .|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y--------~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDY--------ANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcc--------cccccCHHHHHHHHHHHH-CCCEEEEECCCCchhhh
Confidence 6899999999986522110 124578999999999987 59999999999987543
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=3.1e-06 Score=92.67 Aligned_cols=40 Identities=15% Similarity=0.133 Sum_probs=36.3
Q ss_pred CCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 643 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 643 gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
+..|+.+++.++++++ ++++.+++||| +.||.+|++.++-
T Consensus 246 ~k~K~~~L~~la~~lg------i~~~qtIaVGD-g~NDl~m~~~AGl 285 (322)
T PRK11133 246 AQYKADTLTRLAQEYE------IPLAQTVAIGD-GANDLPMIKAAGL 285 (322)
T ss_pred cccHHHHHHHHHHHcC------CChhhEEEEEC-CHHHHHHHHHCCC
Confidence 3589999999999988 57899999999 9999999999975
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.75 E-value=5.5e-05 Score=80.29 Aligned_cols=71 Identities=15% Similarity=0.287 Sum_probs=55.5
Q ss_pred cCeEEEEecCCccCCCCCCCCCCCcchhhhccCC-ChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCce----E
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLW----L 541 (814)
Q Consensus 467 ~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~-~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l~----l 541 (814)
..++|+||+||||++... ..++ +|.+.++|.+|.+ .|..++|+|+++...+...+..+++. .
T Consensus 125 ~~kvIvFDLDgTLi~~~~------------~v~irdPgV~EaL~~Lke-kGikLaIaTS~~Re~v~~~L~~lGLd~YFdv 191 (301)
T TIGR01684 125 PPHVVVFDLDSTLITDEE------------PVRIRDPRIYDSLTELKK-RGCILVLWSYGDRDHVVESMRKVKLDRYFDI 191 (301)
T ss_pred cceEEEEecCCCCcCCCC------------ccccCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCCCcccCE
Confidence 457999999999998721 2334 4999999999998 59999999999999888888776542 5
Q ss_pred EccCcEEEE
Q 003508 542 AAENGMFLR 550 (814)
Q Consensus 542 ia~hG~~i~ 550 (814)
|..+|...+
T Consensus 192 IIs~Gdv~~ 200 (301)
T TIGR01684 192 IISGGHKAE 200 (301)
T ss_pred EEECCcccc
Confidence 666666544
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00023 Score=75.40 Aligned_cols=64 Identities=5% Similarity=0.178 Sum_probs=49.6
Q ss_pred eEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcC---CChHHHHHhhcccCc-----e
Q 003508 469 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQEYNL-----W 540 (814)
Q Consensus 469 ~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSG---R~~~~l~~~~~~~~l-----~ 540 (814)
++|+||+||||... ...+ +.+.++|++|.+ .|.+|+++|| |+...+.+.+..+++ .
T Consensus 2 ~~~~~D~DGtl~~~--------------~~~i-~~a~~~l~~l~~-~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~ 65 (249)
T TIGR01457 2 KGYLIDLDGTMYKG--------------KERI-PEAETFVHELQK-RDIPYLFVTNNSTRTPESVAEMLASFDIPATLET 65 (249)
T ss_pred CEEEEeCCCceEcC--------------CeeC-cCHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhh
Confidence 58999999999975 1223 478999999998 5999999995 999998888877643 2
Q ss_pred EEccCcEE
Q 003508 541 LAAENGMF 548 (814)
Q Consensus 541 lia~hG~~ 548 (814)
++..+|+.
T Consensus 66 iit~~~~~ 73 (249)
T TIGR01457 66 VFTASMAT 73 (249)
T ss_pred EeeHHHHH
Confidence 55666653
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0013 Score=67.92 Aligned_cols=37 Identities=14% Similarity=0.109 Sum_probs=32.3
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhcc
Q 003508 645 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 645 nKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~ 688 (814)
.|+..+++++++++ .+++.+++||| +.+|.+|.+.++
T Consensus 152 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~Di~aa~~ag 188 (219)
T TIGR00338 152 YKGKTLLILLRKEG------ISPENTVAVGD-GANDLSMIKAAG 188 (219)
T ss_pred ccHHHHHHHHHHcC------CCHHHEEEEEC-CHHHHHHHHhCC
Confidence 48999999999887 46788999999 999999988874
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00036 Score=74.22 Aligned_cols=70 Identities=16% Similarity=0.242 Sum_probs=52.4
Q ss_pred cCeEEEEecCCccCCCCCCCCCCCcchhhhccCC-ChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCc----eE
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKL-HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL----WL 541 (814)
Q Consensus 467 ~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~-~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l----~l 541 (814)
..++|+||+||||+.... ..++ +|.+.++|.+|.+ .|..++|+|+.+...+...+..+++ ..
T Consensus 127 ~~~~i~~D~D~TL~~~~~------------~v~irdp~V~EtL~eLke-kGikLaIvTNg~Re~v~~~Le~lgL~~yFDv 193 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEE------------PVRIRDPFVYDSLDELKE-RGCVLVLWSYGNREHVVHSLKETKLEGYFDI 193 (303)
T ss_pred eccEEEEecCCCccCCCC------------ccccCChhHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHHcCCCccccE
Confidence 357999999999998721 2233 5899999999998 6999999998888888877776643 24
Q ss_pred EccCcEEE
Q 003508 542 AAENGMFL 549 (814)
Q Consensus 542 ia~hG~~i 549 (814)
+..+|...
T Consensus 194 II~~g~i~ 201 (303)
T PHA03398 194 IICGGRKA 201 (303)
T ss_pred EEECCCcc
Confidence 44455543
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00072 Score=67.17 Aligned_cols=61 Identities=11% Similarity=0.151 Sum_probs=40.4
Q ss_pred CeEEEEecCCccCCCC---CCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcc
Q 003508 468 NRLLILGFNATLTEPV---DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 536 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~---~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~ 536 (814)
.++++||+||||++-. +.-+ ++....+-+-...|+.|.+ .+..++|+|+.+...+...++.
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g-------~~~~~~~~~D~~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~ 70 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEG-------IESRNFDIKDGMGVIVLQL-CGIDVAIITSKKSGAVRHRAEE 70 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCC-------cEEEEEecchHHHHHHHHH-CCCEEEEEECCCcHHHHHHHHH
Confidence 6899999999999851 1110 0123345556667777776 4788888888877666555543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.00065 Score=64.39 Aligned_cols=64 Identities=22% Similarity=0.363 Sum_probs=47.3
Q ss_pred eEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCC--------hHHHHHhhcccCc
Q 003508 469 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD--------RNVLDKNFQEYNL 539 (814)
Q Consensus 469 ~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~--------~~~l~~~~~~~~l 539 (814)
|+++||+||||++.... .+. .....+.+.+.++|+.|.+ .|..++|+|+++ ...+...+..+++
T Consensus 1 k~~~~D~dgtL~~~~~~----~~~--~~~~~~~~~v~~~l~~L~~-~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY----VDD--EDERILYPEVPDALAELKE-AGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred CEEEEeCCCceecCCCC----CCC--HHHheeCCCHHHHHHHHHH-CCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 57999999999963110 000 1345678999999999987 599999999998 6667777766543
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.00017 Score=74.45 Aligned_cols=47 Identities=17% Similarity=0.142 Sum_probs=39.8
Q ss_pred EEEEEECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 636 SVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 636 ~vEI~p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
++-....+-.|..+++.+++.++ ++.+.++++|| +.||.+||+.++.
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g------~~~~~~~a~gD-s~nDlpml~~ag~ 181 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELG------IPLEETVAYGD-SANDLPMLEAAGL 181 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcC------CCHHHeEEEcC-chhhHHHHHhCCC
Confidence 44444456689999999999988 56789999999 9999999999976
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.048 Score=58.75 Aligned_cols=166 Identities=14% Similarity=0.231 Sum_probs=109.1
Q ss_pred CCeEEEEeccccccCCHHHHHHHHHHHHHh----CccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003508 239 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEE----NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 314 (814)
Q Consensus 239 ~~~vil~VgRld~~KGi~~~l~Af~~ll~~----~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~ 314 (814)
...++++--.+.|...+--+++|...+-+. .-++ .++..+ |+ |.||..+.+.+++++. .
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~l-P~llci-IT----GKGPlkE~Y~~~I~~~-----------~ 316 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNL-PSLLCI-IT----GKGPLKEKYSQEIHEK-----------N 316 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCC-CcEEEE-Ec----CCCchhHHHHHHHHHh-----------c
Confidence 456888888999999999999999855221 1111 123333 43 3456655566555554 3
Q ss_pred cccEEEecCCCCHHHHHHHHHhccEEEE--CCCCccCChh--HHHHhhhccCCCceEEEeCCCCccccc--CCceEEECC
Q 003508 315 AVPIHHLDRSLDFPALCALYAVTDVALV--TSLRDGMNLV--SYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP 388 (814)
Q Consensus 315 ~~~V~~~~g~v~~~el~aly~~ADv~v~--~S~~EG~~Lv--~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP 388 (814)
|..|.+.+-.+.-|+.+.++..||..|. ||. -|.-|+ +....-| +-|+++-.|.-..|.+ |+||++++
T Consensus 317 ~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc----glPvcA~~fkcl~ELVkh~eNGlvF~- 390 (444)
T KOG2941|consen 317 LQHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC----GLPVCAVNFKCLDELVKHGENGLVFE- 390 (444)
T ss_pred ccceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC----CCceeeecchhHHHHHhcCCCceEec-
Confidence 5678877888999999999999997664 553 455444 4555566 2566666777666666 89999997
Q ss_pred CCHHHHHHHHHHHhcC---CHHHHHHHHHHHhHHHHHcCHHHHHHHH
Q 003508 389 WNITEVANAIARALNM---SPEEREKRHWHNFTHVTTHTAQEWAETF 432 (814)
Q Consensus 389 ~d~~~lA~ai~~~L~~---~~~er~~r~~~~~~~v~~~~~~~W~~~f 432 (814)
|.+++|+.|..+... +..+.... ++.+++..-.+|.+.-
T Consensus 391 -Ds~eLa~ql~~lf~~fp~~a~~l~~l----kkn~~e~~e~RW~~~W 432 (444)
T KOG2941|consen 391 -DSEELAEQLQMLFKNFPDNADELNQL----KKNLREEQELRWDESW 432 (444)
T ss_pred -cHHHHHHHHHHHHhcCCCCHHHHHHH----HHhhHHHHhhhHHHHH
Confidence 899999999999973 22333322 2223333446776654
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.005 Score=63.46 Aligned_cols=38 Identities=11% Similarity=-0.035 Sum_probs=32.0
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 645 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 645 nKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
-|...+++++++++ .+++.+++||| ..+|..+-+.++-
T Consensus 139 p~p~~~~~~~~~~~------~~~~~~~~iGD-s~~Di~aa~~aG~ 176 (214)
T PRK13288 139 PDPEPVLKALELLG------AKPEEALMVGD-NHHDILAGKNAGT 176 (214)
T ss_pred CCcHHHHHHHHHcC------CCHHHEEEECC-CHHHHHHHHHCCC
Confidence 46788999999987 45789999999 9999998888754
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.006 Score=63.72 Aligned_cols=37 Identities=11% Similarity=-0.107 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 646 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 646 KG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
+...+.++++.++ .+++.+++||| ..+|..+-+.++-
T Consensus 153 ~p~~~~~~~~~l~------~~p~~~l~IGD-s~~Di~aA~~aG~ 189 (229)
T PRK13226 153 HPLPLLVAAERIG------VAPTDCVYVGD-DERDILAARAAGM 189 (229)
T ss_pred CHHHHHHHHHHhC------CChhhEEEeCC-CHHHHHHHHHCCC
Confidence 4566888999887 56889999999 9999998888754
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0029 Score=59.87 Aligned_cols=64 Identities=14% Similarity=0.112 Sum_probs=42.6
Q ss_pred eEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCC-ChHHHHHhhc
Q 003508 469 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNFQ 535 (814)
Q Consensus 469 ~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR-~~~~l~~~~~ 535 (814)
|+|++|+||||.+.-.... ....+- ....+-+.+.+.|+.|.+ .|..++|+|++ +.......+.
T Consensus 1 kli~~DlD~Tl~~~~~~~~-~~~~~~-~~~~~~~gv~e~L~~Lk~-~g~~l~i~Sn~~~~~~~~~~l~ 65 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVV-GEDPII-DLEVTIKEIRDKLQTLKK-NGFLLALASYNDDPHVAYELLK 65 (128)
T ss_pred CEEEEeCCCCCCCCCcccc-cCCcch-hhHHHHHHHHHHHHHHHH-CCeEEEEEeCCCCHHHHHHHHH
Confidence 5899999999997621000 000000 000357899999999987 58999999999 6666655554
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.016 Score=62.38 Aligned_cols=37 Identities=16% Similarity=0.155 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhcc
Q 003508 645 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 645 nKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~ 688 (814)
.|..++..++++++ .+++.+++||| ..+|..+=+.++
T Consensus 196 ~k~~~~~~~l~~~~------~~p~~~l~IGD-s~~Di~aA~~AG 232 (273)
T PRK13225 196 SKRRALSQLVAREG------WQPAAVMYVGD-ETRDVEAARQVG 232 (273)
T ss_pred CCHHHHHHHHHHhC------cChhHEEEECC-CHHHHHHHHHCC
Confidence 46788899999887 45788999999 999877766664
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0016 Score=69.36 Aligned_cols=50 Identities=8% Similarity=0.104 Sum_probs=39.3
Q ss_pred eEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHH
Q 003508 469 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 530 (814)
Q Consensus 469 ~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l 530 (814)
++|+||+||||..... + ...+.|.+.++|++|.+ .|..++++|||+....
T Consensus 2 k~i~~D~DGtl~~~~~-~----------~~~~~~~a~~al~~l~~-~G~~~~~~Tn~~~~~~ 51 (257)
T TIGR01458 2 KGVLLDISGVLYISDA-K----------SGVAVPGSQEAVKRLRG-ASVKVRFVTNTTKESK 51 (257)
T ss_pred CEEEEeCCCeEEeCCC-c----------ccCcCCCHHHHHHHHHH-CCCeEEEEECCCCCCH
Confidence 6899999999997511 0 11267799999999998 5999999999877653
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0059 Score=64.02 Aligned_cols=81 Identities=7% Similarity=-0.068 Sum_probs=52.5
Q ss_pred ChhHHHHHHHhccCeEEEEecCCccCCCCCC-----CCCCCc--------chh-------hhccCCChhHHHHHHHhhcC
Q 003508 455 READSIERYLRSNNRLLILGFNATLTEPVDT-----PGRRGD--------QIR-------EMELKLHPDLKQPLNALCHD 514 (814)
Q Consensus 455 ~~~~~~~~y~~s~~~li~lD~DGTL~~~~~~-----p~~~~~--------~~~-------~~~~~~~~~~~~~L~~L~~~ 514 (814)
..+++.+.+...+.-+|+||+||||++..+- +..... ... .....+-+.+.+.|+.|.+
T Consensus 50 ~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~- 128 (237)
T TIGR01672 50 SVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR- 128 (237)
T ss_pred EHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHH-
Confidence 4677888887766669999999999987541 100000 000 0122344458999999988
Q ss_pred CCceEEEEcCC----ChHHHHHhhcc
Q 003508 515 PKTTIVVLSGS----DRNVLDKNFQE 536 (814)
Q Consensus 515 ~~~~V~IvSGR----~~~~l~~~~~~ 536 (814)
.|.+++|||+| ....++.+++.
T Consensus 129 ~G~~i~iVTnr~~~k~~~~a~~ll~~ 154 (237)
T TIGR01672 129 RGDAIFFVTGRTPGKTDTVSKTLAKN 154 (237)
T ss_pred CCCEEEEEeCCCCCcCHHHHHHHHHH
Confidence 59999999999 33445554443
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.027 Score=60.47 Aligned_cols=41 Identities=12% Similarity=-0.083 Sum_probs=33.4
Q ss_pred CCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 642 VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 642 ~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
.+-.+...++.+++.++ .+++.+++||| ..+|.+|-+.++-
T Consensus 155 ~~Kp~p~~~~~~~~~~g------~~~~~~l~IGD-~~~Di~aA~~aGi 195 (272)
T PRK13223 155 QKKPDPAALLFVMKMAG------VPPSQSLFVGD-SRSDVLAAKAAGV 195 (272)
T ss_pred CCCCCcHHHHHHHHHhC------CChhHEEEECC-CHHHHHHHHHCCC
Confidence 34456778999999987 46789999999 9999999887753
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0025 Score=67.52 Aligned_cols=53 Identities=11% Similarity=0.153 Sum_probs=43.6
Q ss_pred eEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhccc
Q 003508 469 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 537 (814)
Q Consensus 469 ~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~ 537 (814)
++++||+||||... . .+.|.+.++|++|.+ .|.+++++|||+......+...+
T Consensus 2 ~~v~~DlDGtL~~~--------------~-~~~p~a~~~l~~L~~-~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 2 KNVICDIDGVLMHD--------------N-VAVPGAAEFLHRILD-KGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred cEEEEeCCCceEeC--------------C-eeCccHHHHHHHHHH-CCCeEEEEeCCCCCCHHHHHHHH
Confidence 68999999999975 1 467889999999998 59999999999987666555544
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.74 Score=51.67 Aligned_cols=234 Identities=18% Similarity=0.196 Sum_probs=123.1
Q ss_pred CCCCEEEEeCccch--hHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccEEeEecHHHHHHHHHHHH
Q 003508 107 KDGDVVWCHDYHLM--FLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACT 184 (814)
Q Consensus 107 ~~~DiI~ihdyhl~--llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~DlIgf~~~~~~~~fl~~~~ 184 (814)
+++|++..=||.-+ .+.+.+|++++..++.++. +|.+|.==++|-..++.. +|++.--.+ +-..|.+.
T Consensus 81 ~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~--~D~ll~ifP-FE~~~y~~-- 150 (373)
T PF02684_consen 81 EKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKY--VDHLLVIFP-FEPEFYKK-- 150 (373)
T ss_pred cCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHH--HhheeECCc-ccHHHHhc--
Confidence 35688888887654 5788999998887787653 344443223443444333 344321111 11222220
Q ss_pred HHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHh--CCCeEEE--EeccccccCC-HHHHH
Q 003508 185 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVML--GVDRLDMIKG-IPQKL 259 (814)
Q Consensus 185 ~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~vil--~VgRld~~KG-i~~~l 259 (814)
.|++ ..|-|+ .=+|.- .+. .. ....++.+ .++++|. -=.|-...+- ++..+
T Consensus 151 --~g~~-----~~~VGH--------Pl~d~~--~~~---~~----~~~~~~~~l~~~~~iIaLLPGSR~~EI~rllP~~l 206 (373)
T PF02684_consen 151 --HGVP-----VTYVGH--------PLLDEV--KPE---PD----RAEAREKLLDPDKPIIALLPGSRKSEIKRLLPIFL 206 (373)
T ss_pred --cCCC-----eEEECC--------cchhhh--ccC---CC----HHHHHHhcCCCCCcEEEEeCCCCHHHHHHHHHHHH
Confidence 1111 112222 112321 110 01 11122222 3444432 2456655554 48889
Q ss_pred HHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccE
Q 003508 260 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 339 (814)
Q Consensus 260 ~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv 339 (814)
+|++++.+++|+++ ++....+ ..+ .+.+++.....+.. .++... ..+...+++.||+
T Consensus 207 ~aa~~l~~~~p~l~----fvvp~a~-----~~~---~~~i~~~~~~~~~~------~~~~~~-----~~~~~~~m~~ad~ 263 (373)
T PF02684_consen 207 EAAKLLKKQRPDLQ----FVVPVAP-----EVH---EELIEEILAEYPPD------VSIVII-----EGESYDAMAAADA 263 (373)
T ss_pred HHHHHHHHhCCCeE----EEEecCC-----HHH---HHHHHHHHHhhCCC------CeEEEc-----CCchHHHHHhCcc
Confidence 99999999999864 5533322 111 22233333222211 123322 2356778999999
Q ss_pred EEECCCCccCChhHHHHhhhccCCCceEEEeC-----------------CCCccccc-CCce---EEECCCCHHHHHHHH
Q 003508 340 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-----------------FAGAAQSL-GAGA---ILVNPWNITEVANAI 398 (814)
Q Consensus 340 ~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~-----------------~~G~~e~l-g~~~---~lvnP~d~~~lA~ai 398 (814)
.+++| |.+.+|++..+ .|.|+.- +.|.+..+ |... ++-+-.+++.+++++
T Consensus 264 al~~S-----GTaTLE~Al~g----~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~ 334 (373)
T PF02684_consen 264 ALAAS-----GTATLEAALLG----VPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAEL 334 (373)
T ss_pred hhhcC-----CHHHHHHHHhC----CCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHH
Confidence 99999 89999999985 5665543 33333332 2111 222446889999999
Q ss_pred HHHhcCCH
Q 003508 399 ARALNMSP 406 (814)
Q Consensus 399 ~~~L~~~~ 406 (814)
..+|.++.
T Consensus 335 ~~ll~~~~ 342 (373)
T PF02684_consen 335 LELLENPE 342 (373)
T ss_pred HHHhcCHH
Confidence 99998764
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.018 Score=55.97 Aligned_cols=69 Identities=16% Similarity=0.167 Sum_probs=58.7
Q ss_pred HHHHhccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCce
Q 003508 461 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLW 540 (814)
Q Consensus 461 ~~y~~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l~ 540 (814)
+.+.+...+-+++|+|.||++. .....+|++++-+..+.. .|..|+|+|--+..-+..+...+++.
T Consensus 21 ~~L~~~Gikgvi~DlDNTLv~w-------------d~~~~tpe~~~W~~e~k~-~gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 21 DILKAHGIKGVILDLDNTLVPW-------------DNPDATPELRAWLAELKE-AGIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred HHHHHcCCcEEEEeccCceecc-------------cCCCCCHHHHHHHHHHHh-cCCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 4456678899999999999997 345678999999999998 69999999999999999988888776
Q ss_pred EEc
Q 003508 541 LAA 543 (814)
Q Consensus 541 lia 543 (814)
++.
T Consensus 87 fi~ 89 (175)
T COG2179 87 FIY 89 (175)
T ss_pred eee
Confidence 653
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0037 Score=68.57 Aligned_cols=52 Identities=12% Similarity=0.157 Sum_probs=41.1
Q ss_pred cCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhh
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 534 (814)
Q Consensus 467 ~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~ 534 (814)
+.++|+||+||||... . .+-+.+.++|++|.+ .|.+++++|+|+......++
T Consensus 27 ~~~~~~~D~DGtl~~~--------------~-~~~~ga~e~l~~lr~-~g~~~~~~TN~~~~~~~~~~ 78 (311)
T PLN02645 27 SVETFIFDCDGVIWKG--------------D-KLIEGVPETLDMLRS-MGKKLVFVTNNSTKSRAQYG 78 (311)
T ss_pred hCCEEEEeCcCCeEeC--------------C-ccCcCHHHHHHHHHH-CCCEEEEEeCCCCCCHHHHH
Confidence 3578999999999975 1 345788999999998 59999999999955444443
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.00028 Score=84.32 Aligned_cols=219 Identities=15% Similarity=0.088 Sum_probs=130.9
Q ss_pred CChhHHHHHHHhccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHH----
Q 003508 454 LREADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV---- 529 (814)
Q Consensus 454 l~~~~~~~~y~~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~---- 529 (814)
+...++.......+.-|.++|+||||-++..+| ..+.++-.++.+-.+..+ ....+++|||....
T Consensus 175 fpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~---------arhFls~c~R~l~~~~~s--~~~~~~v~~rgr~~~v~~ 243 (732)
T KOG1050|consen 175 FPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDY---------ARHFLSTCSRLLGLEVAS--KFPTAGVSGRGRDVSVKA 243 (732)
T ss_pred CChHHHHHhcccHHHHHHhhhccCccccccccH---------HHHHHHHHHHHHHhhhhc--cCCcceEEeccceeeeee
Confidence 455667777777777789999999999998888 355555555555555544 34466799998655
Q ss_pred ------HHHhhcccCceEEccCcEEEEeC--CCceeecc----cccCChHHHHHHHHHHHHHhcc--------------C
Q 003508 530 ------LDKNFQEYNLWLAAENGMFLRCT--TGKWMTTM----PEHLNMEWVDSLKHVFEYFTER--------------T 583 (814)
Q Consensus 530 ------l~~~~~~~~l~lia~hG~~i~~~--~~~~~~~~----~~~~~~~~~~~v~~i~~~~~~~--------------~ 583 (814)
..++.+..+++.+++||.+++.. ++...-.. .......+.....+.++.|-+- +
T Consensus 244 ~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~ 323 (732)
T KOG1050|consen 244 LPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRT 323 (732)
T ss_pred cccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcc
Confidence 66677767889999999999732 22111000 0001123344455555544321 1
Q ss_pred CCceeeeccceEEEEeccCChhhhHHHHHHHHHHHhcCCCCC-CceEEEEcCcEEEEEE-CCCCHHHHHHHHHHHhcccc
Q 003508 584 PRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISN-ASVEVVQGSKSVEVRA-VGVTKGAAIDRILAEIVHSK 661 (814)
Q Consensus 584 ~g~~iE~K~~~v~~hyr~~d~e~~~~~a~~l~~~l~~~~~~~-~~~~v~~g~~~vEI~p-~gvnKG~av~~ll~~~~~~~ 661 (814)
+|.-+++-..++..||+..+..++...+.. + ..+... ...+...+..+.|++| ..+.||.++..+....+..+
T Consensus 324 ~~~~v~~~k~~v~~~v~rIn~~f~~~~~~p----V-~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 324 DGKEVEELKFCVSVHVRRINEKFGSASYQP----V-HSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cchHHHHHHHHhHhhhhhhhhccCCcccce----E-EEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 121122223445556655443333211000 0 111111 1234556678899998 68999999998887765322
Q ss_pred cCCCCCceEEEEeCCCCCcHHHHHhccCC
Q 003508 662 KMKTAIDYVLCIGHFLGKDEDVYAFFEPE 690 (814)
Q Consensus 662 ~~~~~~d~vl~iGD~d~nDe~mf~~~~~~ 690 (814)
. ..+.=...++|| +.+||+.+..++.|
T Consensus 399 ~-~~~lVlsef~G~-~~tl~d~aivvnpw 425 (732)
T KOG1050|consen 399 K-KSVLVLSEFIGD-DTTLEDAAIVVNPW 425 (732)
T ss_pred c-CCceEEeeeccc-cccccccCEEECCc
Confidence 0 011224489999 99999999999987
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.12 Score=59.22 Aligned_cols=171 Identities=15% Similarity=0.130 Sum_probs=90.4
Q ss_pred CCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003508 239 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 318 (814)
Q Consensus 239 ~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V 318 (814)
+..++.+..++ .|=-+..++.+.++|+.-|+.+ |++...+. .+ ++.+++.+.+. |.. -..|
T Consensus 284 d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~------~~~l~~~~~~~----Gv~-~~Ri 344 (468)
T PF13844_consen 284 DAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPA--SG------EARLRRRFAAH----GVD-PDRI 344 (468)
T ss_dssp SSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETST--TH------HHHHHHHHHHT----TS--GGGE
T ss_pred CceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HH------HHHHHHHHHHc----CCC-hhhE
Confidence 44455556664 5667999999999999999854 55444442 12 12333443332 432 2347
Q ss_pred EEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCC-cccc-----c---CCceEEECCC
Q 003508 319 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-AAQS-----L---GAGAILVNPW 389 (814)
Q Consensus 319 ~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G-~~e~-----l---g~~~~lvnP~ 389 (814)
+| .+..+.++....|+.+||++-|..+-| +.+.+||+.+ |+||+|--+- .+.- | |-.-++. .
T Consensus 345 ~f-~~~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwm-----GVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA--~ 415 (468)
T PF13844_consen 345 IF-SPVAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWM-----GVPVVTLPGETMASRVGASILRALGLPELIA--D 415 (468)
T ss_dssp EE-EE---HHHHHHHGGG-SEEE--SSS---SHHHHHHHHH-----T--EEB---SSGGGSHHHHHHHHHT-GGGB---S
T ss_pred EE-cCCCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHc-----CCCEEeccCCCchhHHHHHHHHHcCCchhcC--C
Confidence 64 567788999999999999999987777 5678999999 6666663321 1111 1 3222222 3
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHH---cCHHHHHHHHHHHHHH
Q 003508 390 NITEVANAIARALNMSPEEREKRHWHNFTHVTT---HTAQEWAETFVSELND 438 (814)
Q Consensus 390 d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~---~~~~~W~~~fl~~l~~ 438 (814)
|.++..+.-.++.+++ +.++...++.++.+.+ ++...|++.|...+..
T Consensus 416 s~~eYv~~Av~La~D~-~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 416 SEEEYVEIAVRLATDP-ERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp SHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 5666665555555543 4555544555554432 5777777777665543
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.004 Score=67.20 Aligned_cols=47 Identities=13% Similarity=0.204 Sum_probs=37.0
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHH
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 530 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l 530 (814)
.++|+||+||||... . .+-+.+.++|++|.+ .|.+++++|||+....
T Consensus 2 ~~~~~~D~DGtl~~~--------------~-~~~~ga~e~l~~L~~-~g~~~~~~Tnns~~~~ 48 (279)
T TIGR01452 2 AQGFIFDCDGVLWLG--------------E-RVVPGAPELLDRLAR-AGKAALFVTNNSTKSR 48 (279)
T ss_pred ccEEEEeCCCceEcC--------------C-eeCcCHHHHHHHHHH-CCCeEEEEeCCCCCCH
Confidence 468999999999874 1 234558999999998 5999999999764433
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.027 Score=59.60 Aligned_cols=93 Identities=23% Similarity=0.344 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEeCccchhHHHHHHhhCC------CCeEEEEEecC-CC---chhhhc--cCCCc-
Q 003508 89 AAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNS------DMKVGWFLHTP-FP---SSEIHR--TLPSR- 155 (814)
Q Consensus 89 ~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~------~~~i~~f~H~P-fp---~~e~~~--~lp~~- 155 (814)
..|.-+++.-++.+...-..+||||+||+|..++|.++|.... ++++.+++|.. |. +.+.+. .+|+.
T Consensus 114 ~rf~~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~ 193 (245)
T PF08323_consen 114 ERFAFFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEY 193 (245)
T ss_dssp HHHHHHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGG
T ss_pred HHHHHHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHH
Confidence 3444444444444443222579999999999999999998753 69999999974 22 112221 12311
Q ss_pred -------------HHHHHHHhhccEEeEecHHHHHHHHH
Q 003508 156 -------------SDLLRAVLAADLVGFHTYDYARHFVS 181 (814)
Q Consensus 156 -------------~~il~~ll~~DlIgf~~~~~~~~fl~ 181 (814)
..+-.++..||.|...++.|++.-++
T Consensus 194 ~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 194 FQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp S-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred hccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 24456788999999999999876543
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.0072 Score=57.93 Aligned_cols=66 Identities=21% Similarity=0.413 Sum_probs=43.1
Q ss_pred ccCeEEEEecCCccCCCC---CCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCc
Q 003508 466 SNNRLLILGFNATLTEPV---DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 539 (814)
Q Consensus 466 s~~~li~lD~DGTL~~~~---~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l 539 (814)
.+.||+++|.||||++-. ++- +..+ ....-.-=-.|+.|.+ .|++|+|+|||.-.-+++..+.+++
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~~~---Gee~----KaFnv~DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~LGI 74 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYDEN---GEEI----KAFNVRDGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDLGI 74 (170)
T ss_pred hhceEEEEeccceeecCeEEEcCC---Ccee----eeeeccCcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHcCC
Confidence 457999999999999841 110 0001 1111111234556665 5999999999999999998887654
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.009 Score=59.25 Aligned_cols=56 Identities=14% Similarity=0.239 Sum_probs=37.6
Q ss_pred cCeEEEEecCCccCCCCC-CCCCCCcchhhhccC-CChhHHHHHHHhhcCCCceEEEEcCCCh
Q 003508 467 NNRLLILGFNATLTEPVD-TPGRRGDQIREMELK-LHPDLKQPLNALCHDPKTTIVVLSGSDR 527 (814)
Q Consensus 467 ~~~li~lD~DGTL~~~~~-~p~~~~~~~~~~~~~-~~~~~~~~L~~L~~~~~~~V~IvSGR~~ 527 (814)
+.++++||+||||+.... .+ .. +.+ .+-+ +-|.+.++|++|.+ .|..++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~--~~-~~~-~~~~~~~pgv~e~L~~Lk~-~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKV--FP-TSA-SDWRFLYPEIPAKLQELDD-EGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCc--cc-CCh-HHeEEecCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 457899999999996421 00 00 000 1122 34889999999987 5999999997553
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.0072 Score=60.44 Aligned_cols=52 Identities=12% Similarity=0.167 Sum_probs=39.0
Q ss_pred eEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCCh
Q 003508 469 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 527 (814)
Q Consensus 469 ~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~ 527 (814)
+++|||.||||+...+.. +.. ++..+-|.+.++|++|.+ .|.+++|+|.-+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~----~~~--~~~~~~pgv~e~L~~Lk~-~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYV----HEI--DNFEFIDGVIDALRELKK-MGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCC----CCH--HHeEECCCHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 789999999999532211 000 356678899999999998 5999999998653
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.031 Score=55.60 Aligned_cols=60 Identities=13% Similarity=0.160 Sum_probs=46.1
Q ss_pred hccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCC-hHHHHHhhcccC
Q 003508 465 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLDKNFQEYN 538 (814)
Q Consensus 465 ~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~-~~~l~~~~~~~~ 538 (814)
....+++++|+||||+.. ....+.+.+.++|+.|.+ .+..++|+|+.+ ...++.++..++
T Consensus 22 ~~~v~~vv~D~Dgtl~~~-------------~~~~~~pgv~e~L~~Lk~-~g~~l~I~Sn~~~~~~~~~~~~~~g 82 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYP-------------DHNEAYPALRDWIEELKA-AGRKLLIVSNNAGEQRAKAVEKALG 82 (170)
T ss_pred HCCCCEEEEecCCccccC-------------CCCCcChhHHHHHHHHHH-cCCEEEEEeCCchHHHHHHHHHHcC
Confidence 356789999999999976 233577899999999987 589999999998 455555444433
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.049 Score=56.55 Aligned_cols=35 Identities=11% Similarity=-0.033 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhcc
Q 003508 647 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 647 G~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~ 688 (814)
-..+..+++.++ .+++.++++|| ..+|..|=+.++
T Consensus 148 P~~l~~~~~~~~------~~~~~~l~VGD-s~~Di~aA~~Ag 182 (220)
T COG0546 148 PEPLLLLLEKLG------LDPEEALMVGD-SLNDILAAKAAG 182 (220)
T ss_pred HHHHHHHHHHhC------CChhheEEECC-CHHHHHHHHHcC
Confidence 345667778777 34578999999 999999988886
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.015 Score=56.41 Aligned_cols=53 Identities=19% Similarity=0.232 Sum_probs=38.7
Q ss_pred eEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCC
Q 003508 469 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 526 (814)
Q Consensus 469 ~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~ 526 (814)
++++||+||||++..... ..+.. ....+-|.+.++|+.|.+ .|..++|+|+.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~--~~~~~--~~~~~~~g~~~~l~~Lk~-~g~~~~I~Sn~~ 53 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSD--YPRSL--DDWQLRPGAVPALLTLRA-AGYTVVVVTNQS 53 (147)
T ss_pred CeEEEeCCCceeccCCcc--cCCCH--HHeEEcCChHHHHHHHHH-CCCEEEEEeCCC
Confidence 368999999999863210 01111 234577899999999998 599999999876
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.56 Score=51.94 Aligned_cols=251 Identities=14% Similarity=0.122 Sum_probs=126.7
Q ss_pred CCCCEEEEeCccc--hhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHhhccEEeEecHHHHHHHHHHHH
Q 003508 107 KDGDVVWCHDYHL--MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACT 184 (814)
Q Consensus 107 ~~~DiI~ihdyhl--~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll~~DlIgf~~~~~~~~fl~~~~ 184 (814)
++.|++..=|+.- +.+...+|+.+|+.||.++. +|.+|.-=|.|...+.. .+|++.--.+-.. .|.+
T Consensus 84 ~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV-----~PsVWAWr~~Ra~~i~~--~~D~lLailPFE~-~~y~--- 152 (381)
T COG0763 84 NKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYV-----SPSVWAWRPKRAVKIAK--YVDHLLAILPFEP-AFYD--- 152 (381)
T ss_pred cCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEE-----CcceeeechhhHHHHHH--HhhHeeeecCCCH-HHHH---
Confidence 3668877777653 35789999999999998754 23344322333222222 3465542222111 2221
Q ss_pred HHhCcccCCCceeeCCeEEEEEEeecccChhhhhhhhcCCchHHHHHHHHHHhC----CCeEEEEec-cc-cccCCHHHH
Q 003508 185 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA----GRKVMLGVD-RL-DMIKGIPQK 258 (814)
Q Consensus 185 ~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~----~~~vil~Vg-Rl-d~~KGi~~~ 258 (814)
+ .|.. ..|=|+ .=.|.-.+.+ ..+..|++++ .+.+.+.-| |- +=..-++-.
T Consensus 153 k-~g~~-----~~yVGH--------pl~d~i~~~~---------~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f 209 (381)
T COG0763 153 K-FGLP-----CTYVGH--------PLADEIPLLP---------DREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPF 209 (381)
T ss_pred h-cCCC-----eEEeCC--------hhhhhccccc---------cHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHH
Confidence 1 1111 111121 1122111111 1123555552 334444333 32 233446667
Q ss_pred HHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhcc
Q 003508 259 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTD 338 (814)
Q Consensus 259 l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~AD 338 (814)
++|+.++.+++|+.+ ++.-.. .+.|+.+..+... .- . .. ..++ +...+....+.+||
T Consensus 210 ~~a~~~l~~~~~~~~----~vlp~~-----~~~~~~~~~~~~~---~~----~-~~-~~~~-----~~~~~~~~a~~~aD 266 (381)
T COG0763 210 VQAAQELKARYPDLK----FVLPLV-----NAKYRRIIEEALK---WE----V-AG-LSLI-----LIDGEKRKAFAAAD 266 (381)
T ss_pred HHHHHHHHhhCCCce----EEEecC-----cHHHHHHHHHHhh---cc----c-cC-ceEE-----ecCchHHHHHHHhh
Confidence 788899988999975 432111 1333333322211 10 0 00 1122 23456778899999
Q ss_pred EEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcccc-c----C-----------CceEEEC-----CCCHHHHHHH
Q 003508 339 VALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-L----G-----------AGAILVN-----PWNITEVANA 397 (814)
Q Consensus 339 v~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~-l----g-----------~~~~lvn-----P~d~~~lA~a 397 (814)
+.+..| |.+.+|++.++ .|.|++--...-.. + . -+-.+|+ -..++.+|++
T Consensus 267 ~al~aS-----GT~tLE~aL~g----~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~ 337 (381)
T COG0763 267 AALAAS-----GTATLEAALAG----TPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARA 337 (381)
T ss_pred HHHHhc-----cHHHHHHHHhC----CCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHH
Confidence 999999 89999999995 77777644332222 1 0 1111111 1247899999
Q ss_pred HHHHhcCCHH--HHHHHHHHHhHHHHHc
Q 003508 398 IARALNMSPE--EREKRHWHNFTHVTTH 423 (814)
Q Consensus 398 i~~~L~~~~~--er~~r~~~~~~~v~~~ 423 (814)
+..++.++.. +..+....+++.+.+.
T Consensus 338 l~~ll~~~~~~~~~~~~~~~l~~~l~~~ 365 (381)
T COG0763 338 LEELLLNGDRREALKEKFRELHQYLRED 365 (381)
T ss_pred HHHHhcChHhHHHHHHHHHHHHHHHcCC
Confidence 9999987621 2223334444445443
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.031 Score=54.33 Aligned_cols=92 Identities=16% Similarity=0.249 Sum_probs=47.2
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcH-----HHHHH-HhhccEEeEecHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS-----DLLRA-VLAADLVGFHTYDYARHFVS 181 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~-----~il~~-ll~~DlIgf~~~~~~~~fl~ 181 (814)
+.|+||+|.++...+...... +.++.+++|.+++.........+.. .+.+. ...+|.+...+....+.+.
T Consensus 80 ~~DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~~l~- 155 (177)
T PF13439_consen 80 KPDIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKDELI- 155 (177)
T ss_dssp T-SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHHHHH-
T ss_pred CCCeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHHHHH-
Confidence 569999999887765444333 7899999998874211111111111 11112 2457888877765544443
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEeecccChhhhh
Q 003508 182 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFI 218 (814)
Q Consensus 182 ~~~~~l~~~~~~~~~~~~g~~~~i~v~p~GId~~~f~ 218 (814)
+ +|. ...++.++|||||++.|+
T Consensus 156 ---~-~~~-----------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 156 ---K-FGI-----------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp ---H-HT-------------SS-EEE----B-CCCH-
T ss_pred ---H-hCC-----------cccCCEEEECCccHHHcC
Confidence 2 332 246799999999999884
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.037 Score=58.08 Aligned_cols=71 Identities=8% Similarity=-0.050 Sum_probs=46.9
Q ss_pred ChhHHHHHHHhccCeEEEEecCCccCCCCCCCCCCCc----c-------------h---hhhccCCChhHHHHHHHhhcC
Q 003508 455 READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGD----Q-------------I---REMELKLHPDLKQPLNALCHD 514 (814)
Q Consensus 455 ~~~~~~~~y~~s~~~li~lD~DGTL~~~~~~p~~~~~----~-------------~---~~~~~~~~~~~~~~L~~L~~~ 514 (814)
.++++.+.....+...|.||+|||+++..+..-...+ + . ......|-+.+++.|+.|.+
T Consensus 50 ~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~- 128 (237)
T PRK11009 50 SVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVK- 128 (237)
T ss_pred EHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHH-
Confidence 4666776665545558999999999974321100000 0 0 01234566679999999987
Q ss_pred CCceEEEEcCCC
Q 003508 515 PKTTIVVLSGSD 526 (814)
Q Consensus 515 ~~~~V~IvSGR~ 526 (814)
.|..+++||||+
T Consensus 129 ~G~~I~iVTnR~ 140 (237)
T PRK11009 129 RGDSIYFITGRT 140 (237)
T ss_pred CCCeEEEEeCCC
Confidence 599999999996
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.024 Score=55.88 Aligned_cols=54 Identities=15% Similarity=0.181 Sum_probs=39.0
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCC
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 525 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR 525 (814)
.+++|||.||||....+.+ ...+.+ ....+-|.+.++|+.|.+ .|.+++|+|..
T Consensus 1 ~~~~~~d~dg~l~~~~~~~--~~~~~~-~~~~~~pgv~e~L~~L~~-~g~~l~IvSN~ 54 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSD--FQVDAL-EKLRFEKGVIPALLKLKK-AGYKFVMVTNQ 54 (161)
T ss_pred CCEEEEeCCCCccccCCCc--cccCCH-HHeeECCCHHHHHHHHHH-CCCeEEEEeCC
Confidence 3689999999998742211 111121 345677899999999998 58999999985
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.021 Score=56.14 Aligned_cols=53 Identities=15% Similarity=0.260 Sum_probs=33.4
Q ss_pred eEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcC
Q 003508 469 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG 524 (814)
Q Consensus 469 ~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSG 524 (814)
|+.+||+||||+.... +....+-+.+-...++.+.++|++|.+ .|..++|+|-
T Consensus 1 Kia~fD~DgTLi~~~s--~~~f~~~~~D~~~~~~~v~~~L~~l~~-~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS--GKKFPKDPDDWKFFPPGVPEALRELHK-KGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-ST--STTS-SSTCGGEEC-TTHHHHHHHHHH-TTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCC--CCcCcCCHHHhhhcchhHHHHHHHHHh-cCCeEEEEeC
Confidence 5789999999985421 000000011223456789999999988 5999999995
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=94.98 E-value=4.6 Score=45.35 Aligned_cols=73 Identities=19% Similarity=0.085 Sum_probs=52.2
Q ss_pred EEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHH
Q 003508 318 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 395 (814)
Q Consensus 318 V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA 395 (814)
|. +.++++..++.++++.|+++|-.|- | ...||.+.+ .|+|.- ..=.+.+ |.+.++| +.|.+++.
T Consensus 264 v~-l~~~l~~~~~l~Ll~~a~~vitdSS----g-gi~EA~~lg----~Pvv~l--~~R~e~~~~g~nvl~v-g~~~~~I~ 330 (365)
T TIGR03568 264 FR-LFKSLGQERYLSLLKNADAVIGNSS----S-GIIEAPSFG----VPTINI--GTRQKGRLRADSVIDV-DPDKEEIV 330 (365)
T ss_pred EE-EECCCChHHHHHHHHhCCEEEEcCh----h-HHHhhhhcC----CCEEee--cCCchhhhhcCeEEEe-CCCHHHHH
Confidence 54 5789999999999999999996552 1 237999984 555522 2222323 5566778 67899999
Q ss_pred HHHHHHhc
Q 003508 396 NAIARALN 403 (814)
Q Consensus 396 ~ai~~~L~ 403 (814)
+++.++++
T Consensus 331 ~a~~~~~~ 338 (365)
T TIGR03568 331 KAIEKLLD 338 (365)
T ss_pred HHHHHHhC
Confidence 99999654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=94.86 E-value=3 Score=45.79 Aligned_cols=145 Identities=19% Similarity=0.191 Sum_probs=93.1
Q ss_pred CCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003508 239 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 318 (814)
Q Consensus 239 ~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V 318 (814)
++..|+-=-.-|++-+....|+++.+... . ++.++. |- +.+..++++.+++.+.+.++ ||.. .+
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~~--~----~~kIiv---PL-sYg~~n~~Yi~~V~~~~~~l---F~~~---~~ 247 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQFG--D----DVKIIV---PL-SYGANNQAYIQQVIQAGKEL---FGAE---NF 247 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhcC--C----CeEEEE---EC-CCCCchHHHHHHHHHHHHHh---cCcc---ce
Confidence 34444444456788888887777765432 1 233331 21 12222445677777776664 4432 35
Q ss_pred EEecCCCCHHHHHHHHHhccEEEECCCC-ccCChhHHHHhhhccCCCceEEEeCCCCcccccCCceEEE----CCCCHHH
Q 003508 319 HHLDRSLDFPALCALYAVTDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILV----NPWNITE 393 (814)
Q Consensus 319 ~~~~g~v~~~el~aly~~ADv~v~~S~~-EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~~~lv----nP~d~~~ 393 (814)
..++..++.+|+.++++.||++++...| .|+|...+ .+.+ |.++++|+..-....+.+-++.| +.-|...
T Consensus 248 ~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~----G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~ 322 (360)
T PF07429_consen 248 QILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL----GKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEAL 322 (360)
T ss_pred eEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc----CCeEEEecCChHHHHHHhCCCeEEeccccCCHHH
Confidence 5578899999999999999999999975 89997654 3455 48999999888887773334322 4556666
Q ss_pred HHHHHHHHhcC
Q 003508 394 VANAIARALNM 404 (814)
Q Consensus 394 lA~ai~~~L~~ 404 (814)
+++|=+++...
T Consensus 323 v~ea~rql~~~ 333 (360)
T PF07429_consen 323 VREAQRQLANV 333 (360)
T ss_pred HHHHHHHHhhC
Confidence 66665555443
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.052 Score=56.41 Aligned_cols=69 Identities=13% Similarity=0.053 Sum_probs=46.8
Q ss_pred cCeEEEEecCCccCCCCCCCCC--C----C-----cc-hhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHH---HH
Q 003508 467 NNRLLILGFNATLTEPVDTPGR--R----G-----DQ-IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV---LD 531 (814)
Q Consensus 467 ~~~li~lD~DGTL~~~~~~p~~--~----~-----~~-~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~---l~ 531 (814)
.+-+++||+|-|+++..+.-.. . . .+ +....+.+-|.++++++.|.+ .|..|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~-~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIE-LGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHH
Confidence 4578999999999975310000 0 0 00 112456677899999999998 599999999999765 43
Q ss_pred Hhhcc
Q 003508 532 KNFQE 536 (814)
Q Consensus 532 ~~~~~ 536 (814)
+++..
T Consensus 155 ~nL~~ 159 (229)
T TIGR01675 155 DNLIN 159 (229)
T ss_pred HHHHH
Confidence 44443
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.11 Score=53.74 Aligned_cols=38 Identities=3% Similarity=-0.258 Sum_probs=32.1
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 645 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 645 nKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
.+...++.+++.++ .+++.+++||| ..+|.++-+.++-
T Consensus 149 p~~~~~~~~~~~~~------~~~~~~~~igD-s~~Di~aA~~aG~ 186 (222)
T PRK10826 149 PHPEVYLNCAAKLG------VDPLTCVALED-SFNGMIAAKAARM 186 (222)
T ss_pred CCHHHHHHHHHHcC------CCHHHeEEEcC-ChhhHHHHHHcCC
Confidence 45568899999987 56899999999 9999999888864
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.074 Score=52.63 Aligned_cols=65 Identities=20% Similarity=0.233 Sum_probs=48.8
Q ss_pred HHhccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCc-eEEEEcCCC-------hHHHHHhh
Q 003508 463 YLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSD-------RNVLDKNF 534 (814)
Q Consensus 463 y~~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~-~V~IvSGR~-------~~~l~~~~ 534 (814)
.++...+.++||.|.||++. ....++++..+.++++.+.-+. .|+|+|--. ...++..-
T Consensus 36 Lk~~Gik~li~DkDNTL~~~-------------~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~ 102 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPP-------------YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALE 102 (168)
T ss_pred hhhcCceEEEEcCCCCCCCC-------------CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHH
Confidence 56788999999999999976 3567899999999999985332 599999863 44454444
Q ss_pred cccCce
Q 003508 535 QEYNLW 540 (814)
Q Consensus 535 ~~~~l~ 540 (814)
..+++.
T Consensus 103 ~~lgIp 108 (168)
T PF09419_consen 103 KALGIP 108 (168)
T ss_pred HhhCCc
Confidence 444544
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.064 Score=55.53 Aligned_cols=35 Identities=17% Similarity=0.099 Sum_probs=27.7
Q ss_pred CCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHh
Q 003508 643 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAF 686 (814)
Q Consensus 643 gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~ 686 (814)
+-.|..+++++++.++ .+.+++||| +.+|..|-+.
T Consensus 153 ~~~K~~~i~~~~~~~~--------~~~~i~iGD-s~~Di~aa~~ 187 (224)
T PLN02954 153 SGGKAEAVQHIKKKHG--------YKTMVMIGD-GATDLEARKP 187 (224)
T ss_pred CccHHHHHHHHHHHcC--------CCceEEEeC-CHHHHHhhhc
Confidence 3468899999988765 357899999 9999988443
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.06 Score=53.99 Aligned_cols=53 Identities=13% Similarity=0.090 Sum_probs=39.4
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCC
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 526 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~ 526 (814)
.|+++||.||||.-... + ..... ....+-|.+.++|++|.+ .+..++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~-~--~~~~~--~~~~~~pgv~e~L~~Lk~-~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSD-G--YVKSP--DEWIPIPGSIEAIARLKQ-AGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCc-c--ccCCH--HHeEECCCHHHHHHHHHH-CCCEEEEEeCCc
Confidence 47899999999865421 1 12222 234577899999999998 589999999876
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=94.51 E-value=7.3 Score=43.42 Aligned_cols=243 Identities=15% Similarity=0.101 Sum_probs=118.5
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcHHHHHHHh--hccEEeEecHHHHHHHHHHHHH
Q 003508 108 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTR 185 (814)
Q Consensus 108 ~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~~il~~ll--~~DlIgf~~~~~~~~fl~~~~~ 185 (814)
.+|+|.||.=-.-.++..+-....++||+. +|---=+.+.. .|.-++..|.+. -+|+-.--+..+.++.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~~~ipv~H-ieaGlRs~d~~--~g~~de~~R~~i~~la~lhf~~t~~~~~~L~~---- 139 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFYLNIPVAH-IEAGLRSGDRT--EGMPDEINRHAIDKLAHLHFAPTEEARERLLQ---- 139 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHHTT-EEEE-ES-----S-TT--SSTTHHHHHHHHHHH-SEEEESSHHHHHHHHH----
T ss_pred CCCEEEEEcCCchHHHHHHHHHHhCCCEEE-ecCCCCccccC--CCCchhhhhhhhhhhhhhhccCCHHHHHHHHh----
Confidence 458998987555555555555556788764 23211011221 123345555433 256666666666666553
Q ss_pred HhCcccCCCceeeCCeEEEEEEe-ecccChhhhhhhhcCCchHHHHHHHHHHhCCCeEEEEecccccc---CCHHHHHHH
Q 003508 186 ILGFEGTPEGVEDQGRLTRVAAF-PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMI---KGIPQKLLA 261 (814)
Q Consensus 186 ~l~~~~~~~~~~~~g~~~~i~v~-p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~vil~VgRld~~---KGi~~~l~A 261 (814)
.|.+ ..+|.++ ..++|.-........+.. ....+-....++.+++..=|.... ......+.+
T Consensus 140 -~G~~-----------~~rI~~vG~~~~D~l~~~~~~~~~~~--~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~ 205 (346)
T PF02350_consen 140 -EGEP-----------PERIFVVGNPGIDALLQNKEEIEEKY--KNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEA 205 (346)
T ss_dssp -TT-------------GGGEEE---HHHHHHHHHHHTTCC-H--HHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHH
T ss_pred -cCCC-----------CCeEEEEChHHHHHHHHhHHHHhhhh--hhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHH
Confidence 1321 1233333 345664322211111111 011221112334444445444433 345677777
Q ss_pred HHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEecCCCCHHHHHHHHHhccEEE
Q 003508 262 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 341 (814)
Q Consensus 262 f~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~~g~v~~~el~aly~~ADv~v 341 (814)
++.+.+. ++ +.+|....++ | ...+.+.+...++ ..+++ ..+++..++..+++.|++.|
T Consensus 206 l~~L~~~-~~----~~vi~~~hn~----p---~~~~~i~~~l~~~---------~~v~~-~~~l~~~~~l~ll~~a~~vv 263 (346)
T PF02350_consen 206 LKALAER-QN----VPVIFPLHNN----P---RGSDIIIEKLKKY---------DNVRL-IEPLGYEEYLSLLKNADLVV 263 (346)
T ss_dssp HHHHHHH-TT----EEEEEE--S-----H---HHHHHHHHHHTT----------TTEEE-E----HHHHHHHHHHESEEE
T ss_pred HHHHHhc-CC----CcEEEEecCC----c---hHHHHHHHHhccc---------CCEEE-ECCCCHHHHHHHHhcceEEE
Confidence 7777776 43 4454333211 1 1233333322221 13553 46899999999999999999
Q ss_pred ECCCCccCChhHH-HHhhhccCCCceEEEeCCCCccccc--CCceEEECCCCHHHHHHHHHHHhcC
Q 003508 342 VTSLRDGMNLVSY-EFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNM 404 (814)
Q Consensus 342 ~~S~~EG~~Lv~l-Eama~~~~~~g~vVlS~~~G~~e~l--g~~~~lvnP~d~~~lA~ai~~~L~~ 404 (814)
--| | .+. ||.+++ .|+|.=...|-.++. ....++|. .|.+++.++|.+++..
T Consensus 264 gdS-----s-GI~eEa~~lg----~P~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 264 GDS-----S-GIQEEAPSLG----KPVVNIRDSGERQEGRERGSNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp ESS-----H-HHHHHGGGGT------EEECSSS-S-HHHHHTTSEEEET-SSHHHHHHHHHHHHH-
T ss_pred EcC-----c-cHHHHHHHhC----CeEEEecCCCCCHHHHhhcceEEeC-CCHHHHHHHHHHHHhC
Confidence 887 2 355 999994 677777777777664 23345566 7999999999999975
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.098 Score=53.23 Aligned_cols=69 Identities=16% Similarity=0.186 Sum_probs=49.4
Q ss_pred hhHHHHHHHhccCeEEEEecCCccCCCC----CCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChH
Q 003508 456 EADSIERYLRSNNRLLILGFNATLTEPV----DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 528 (814)
Q Consensus 456 ~~~~~~~y~~s~~~li~lD~DGTL~~~~----~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~ 528 (814)
.+.+.+.+++...++|++|+|-||++.. .+|. .....-...++|+....+.+|.+ .+..|+|||=-+..
T Consensus 31 ~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~---~~~~~~~~~~tpefk~~~~~l~~-~~I~v~VVTfSd~~ 103 (219)
T PTZ00445 31 ADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPD---NDDIRVLTSVTPDFKILGKRLKN-SNIKISVVTFSDKE 103 (219)
T ss_pred HHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCC---cchhhhhccCCHHHHHHHHHHHH-CCCeEEEEEccchh
Confidence 5667788899999999999999999821 1220 00000123478999999999987 59999999965543
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.07 Score=57.98 Aligned_cols=68 Identities=18% Similarity=0.150 Sum_probs=48.7
Q ss_pred cCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhccc
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 537 (814)
Q Consensus 467 ~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~ 537 (814)
+.+++++|+||||......- ..+-.......+.+.+.++|++|.+ .|..++|+|||+....+..+..+
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRS--PYDWTKVKEDKPNPMVVELVKMYKA-AGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCEEEEECCCcCcCCCCCC--ccchhhcccCCCChhHHHHHHHHHh-CCCEEEEEeCCChhhHHHHHHHH
Confidence 45789999999999764310 0000000235678999999999988 59999999999998877666553
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.032 Score=50.52 Aligned_cols=54 Identities=15% Similarity=0.256 Sum_probs=38.3
Q ss_pred EEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChH---HHHHhhcccCce
Q 003508 471 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN---VLDKNFQEYNLW 540 (814)
Q Consensus 471 i~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~---~l~~~~~~~~l~ 540 (814)
|+||+||||... ..+-|...++|++|.+ .+.+++++|-.+.. .+.+.+...++.
T Consensus 1 ~l~D~dGvl~~g---------------~~~ipga~e~l~~L~~-~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNG---------------NEPIPGAVEALDALRE-RGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEET---------------TEE-TTHHHHHHHHHH-TTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeC---------------CCcCcCHHHHHHHHHH-cCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 689999999964 2356788999999998 48999999976544 444444444443
|
... |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.35 E-value=0.064 Score=59.56 Aligned_cols=55 Identities=18% Similarity=0.202 Sum_probs=40.5
Q ss_pred cCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCC
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 525 (814)
Q Consensus 467 ~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR 525 (814)
+++++|||.||||....... ...+.. ....+-|.+.+.|..|.+ .+.+++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~--y~~~~~-~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD--FQVDSL-DKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc--ccccCc-ccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 36899999999999753100 011111 356788999999999987 69999999984
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.068 Score=53.31 Aligned_cols=52 Identities=15% Similarity=0.150 Sum_probs=38.8
Q ss_pred cCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCC
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 526 (814)
Q Consensus 467 ~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~ 526 (814)
..|+|++|.||||.....-. . + ....+-|.+.+.|++|.+ .|.+++|+|+.+
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~----~--~-~~~~~~pgv~e~L~~Lk~-~G~~l~I~Tn~~ 54 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIH----Y--P-GSFTLFPFTKASLQKLKA-NHIKIFSFTNQP 54 (173)
T ss_pred CCcEEEEeCCCcccCCCCCC----C--H-HHeEECCCHHHHHHHHHH-CCCEEEEEECCc
Confidence 46899999999997542100 0 0 244567899999999988 589999999854
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.091 Score=55.34 Aligned_cols=54 Identities=19% Similarity=0.301 Sum_probs=41.0
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHH--Hhhccc
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD--KNFQEY 537 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~--~~~~~~ 537 (814)
.++++||+||||... ..+-|.+.++|++|.+ .|.+++|+|..+....+ +.+..+
T Consensus 8 ~~~~~~D~dG~l~~~---------------~~~~pga~e~L~~L~~-~G~~~~ivTN~~~~~~~~~~~L~~~ 63 (242)
T TIGR01459 8 YDVFLLDLWGVIIDG---------------NHTYPGAVQNLNKIIA-QGKPVYFVSNSPRNIFSLHKTLKSL 63 (242)
T ss_pred CCEEEEecccccccC---------------CccCccHHHHHHHHHH-CCCEEEEEeCCCCChHHHHHHHHHC
Confidence 468999999999864 2457899999999998 59999999876654333 445444
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.31 Score=57.95 Aligned_cols=66 Identities=17% Similarity=0.313 Sum_probs=51.0
Q ss_pred HHHHhccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCC-ceEEEEcCCChHHHHHhhcccC
Q 003508 461 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPK-TTIVVLSGSDRNVLDKNFQEYN 538 (814)
Q Consensus 461 ~~y~~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~-~~V~IvSGR~~~~l~~~~~~~~ 538 (814)
+.+.....+.+++..||+++.... ....+-|++.++|+.|.+ .| .+++|+||.+....+...+.++
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~-----------~~d~~~~g~~e~l~~L~~-~g~i~v~ivTgd~~~~a~~i~~~lg 423 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIA-----------LRDQLRPEAKEAIAALKR-AGGIKLVMLTGDNRSAAEAVAAELG 423 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEE-----------ecccchHhHHHHHHHHHH-cCCCeEEEEeCCCHHHHHHHHHHhC
Confidence 445566678899999999875421 134577899999999987 47 9999999999988887776644
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.09 Score=55.23 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=40.7
Q ss_pred EEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEc---CCChHHHHHhhcc
Q 003508 471 LILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQE 536 (814)
Q Consensus 471 i~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvS---GR~~~~l~~~~~~ 536 (814)
++||+||||.+.. .+-+.+.++|+.|.+ .+.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~~~---------------~~~~~a~e~i~~l~~-~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLGH---------------KPIPGAAEALNRLRA-KGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcCC---------------ccCcCHHHHHHHHHH-CCCeEEEEECCCCCCHHHHHHHHHH
Confidence 5799999999751 234588999999987 589999998 9999988877665
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.11 Score=60.76 Aligned_cols=57 Identities=9% Similarity=0.178 Sum_probs=39.8
Q ss_pred ccCeEEEEecCCccCCCCC-CCCCCCcchhhhcc-CCChhHHHHHHHhhcCCCceEEEEcCCCh
Q 003508 466 SNNRLLILGFNATLTEPVD-TPGRRGDQIREMEL-KLHPDLKQPLNALCHDPKTTIVVLSGSDR 527 (814)
Q Consensus 466 s~~~li~lD~DGTL~~~~~-~p~~~~~~~~~~~~-~~~~~~~~~L~~L~~~~~~~V~IvSGR~~ 527 (814)
...|++|||+||||..... .+ .... + .+- .+-|.+.+.|++|.+ .|..++|+|..+-
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~--~~~~-~-~d~~~l~pgV~e~L~~L~~-~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKV--FPKG-P-DDWQIIFPEIPEKLKELEA-DGFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCcc--CCCC-H-HHeeecccCHHHHHHHHHH-CCCEEEEEECCcc
Confidence 4568999999999996421 00 0000 0 222 257899999999988 5999999998655
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.14 Score=48.74 Aligned_cols=84 Identities=18% Similarity=0.122 Sum_probs=43.3
Q ss_pred CCCCEEEEeCccchhHHHHHHhhCCCCeEEEEEecCCCchhhhccCCCcH----HHH-HHHhhccEEeEecHHHHHHHHH
Q 003508 107 KDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS----DLL-RAVLAADLVGFHTYDYARHFVS 181 (814)
Q Consensus 107 ~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~~~~lp~~~----~il-~~ll~~DlIgf~~~~~~~~fl~ 181 (814)
.+.|+|++|+++..+++.++++. .++|+.+.+|....... .++.. .+. ..+-.+|.|...+....+.+.+
T Consensus 72 ~~~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 72 ERPDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp ---SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred cCCeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 46799999998877777777733 37899999997542211 11111 222 3355689999988876666553
Q ss_pred HHHHHhCcccCCCceeeCCeEEEEEEeecc
Q 003508 182 ACTRILGFEGTPEGVEDQGRLTRVAAFPIG 211 (814)
Q Consensus 182 ~~~~~l~~~~~~~~~~~~g~~~~i~v~p~G 211 (814)
.|. ...+|.++|||
T Consensus 147 -----~g~-----------~~~ri~vipnG 160 (160)
T PF13579_consen 147 -----YGV-----------PPDRIHVIPNG 160 (160)
T ss_dssp -----H--------------GGGEEE----
T ss_pred -----hCC-----------CCCcEEEeCcC
Confidence 222 24578889987
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=93.29 E-value=2.4 Score=48.13 Aligned_cols=138 Identities=17% Similarity=0.218 Sum_probs=79.2
Q ss_pred EEEecc-ccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccC--------CC
Q 003508 243 MLGVDR-LDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFG--------TL 313 (814)
Q Consensus 243 il~VgR-ld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g--------~~ 313 (814)
++.-.| =+-.++++.+++|++++.++ |+ +.++....+. ..+..+++.+ .+.+.... ..
T Consensus 210 lLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l----~~~g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 210 LLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAIL----EDLGWQLEGSSEDQTSLF 276 (396)
T ss_pred EECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHH----HhcCceecCCccccchhh
Confidence 444556 34556788999999988655 44 4455443232 1222333322 22111000 00
Q ss_pred CcccEEEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCc------ccc---cCCceE
Q 003508 314 TAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA------AQS---LGAGAI 384 (814)
Q Consensus 314 ~~~~V~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~------~e~---lg~~~~ 384 (814)
....+.++ ....++..+|+.||++|..| |.+..|+++++ .|.|+--+.+. .+. +-..++
T Consensus 277 ~~~~~~v~---~~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg----~P~Ilip~~~~q~na~~~~~~~~l~g~~~ 344 (396)
T TIGR03492 277 QKGTLEVL---LGRGAFAEILHWADLGIAMA-----GTATEQAVGLG----KPVIQLPGKGPQFTYGFAEAQSRLLGGSV 344 (396)
T ss_pred ccCceEEE---echHhHHHHHHhCCEEEECc-----CHHHHHHHHhC----CCEEEEeCCCCHHHHHHHHhhHhhcCCEE
Confidence 00012221 12357899999999999997 45669999995 67777653222 111 102455
Q ss_pred EECCCCHHHHHHHHHHHhcCC
Q 003508 385 LVNPWNITEVANAIARALNMS 405 (814)
Q Consensus 385 lvnP~d~~~lA~ai~~~L~~~ 405 (814)
.+...+++.++++|.++|+++
T Consensus 345 ~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 345 FLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred ecCCCCHHHHHHHHHHHHcCH
Confidence 555678899999999999854
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.22 E-value=0.18 Score=53.87 Aligned_cols=72 Identities=14% Similarity=0.169 Sum_probs=47.2
Q ss_pred ccCeEEEEecCCccCCCCCC---------CCCCCcch----hhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHH-
Q 003508 466 SNNRLLILGFNATLTEPVDT---------PGRRGDQI----REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD- 531 (814)
Q Consensus 466 s~~~li~lD~DGTL~~~~~~---------p~~~~~~~----~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~- 531 (814)
.++.+++||+|+|+++..+. | ...... ......+-|.+.+.|+.|.+ .|..++|+|+|+....+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~-~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~-~G~~v~iVTnR~~~~~~~ 150 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKP-FDPETWDKWVQAAQAKPVAGALDFLNYANS-KGVKIFYVSNRSEKEKAA 150 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCc-CCHHHHHHHHHcCCCCcCccHHHHHHHHHH-CCCeEEEEeCCCcchHHH
Confidence 45678999999999975421 1 000001 11234566889999999987 59999999999855443
Q ss_pred --HhhcccCc
Q 003508 532 --KNFQEYNL 539 (814)
Q Consensus 532 --~~~~~~~l 539 (814)
.++...++
T Consensus 151 T~~~Lkk~Gi 160 (266)
T TIGR01533 151 TLKNLKRFGF 160 (266)
T ss_pred HHHHHHHcCc
Confidence 44544333
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=93.15 E-value=0.16 Score=52.63 Aligned_cols=36 Identities=19% Similarity=0.261 Sum_probs=26.4
Q ss_pred CCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 643 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 643 gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
+..|..+++.+ + ...+.+++||| +.+|..|.+.++-
T Consensus 146 ~~~K~~~l~~~----~------~~~~~~i~iGD-s~~Di~aa~~Ag~ 181 (219)
T PRK09552 146 GCCKPSLIRKL----S------DTNDFHIVIGD-SITDLEAAKQADK 181 (219)
T ss_pred CCchHHHHHHh----c------cCCCCEEEEeC-CHHHHHHHHHCCc
Confidence 34577776644 3 23567999999 9999999887754
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=92.97 E-value=0.27 Score=49.13 Aligned_cols=36 Identities=19% Similarity=0.362 Sum_probs=29.3
Q ss_pred hhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC
Q 003508 502 PDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 538 (814)
Q Consensus 502 ~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~ 538 (814)
+++.+.|+.|.+ .+..|+|+||-....++..+..++
T Consensus 92 ~~~~e~i~~~~~-~~~~v~IvS~~~~~~i~~~~~~~~ 127 (192)
T PF12710_consen 92 PDAMELIRELKD-NGIKVVIVSGSPDEIIEPIAERLG 127 (192)
T ss_dssp TTHHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcC
Confidence 567799999877 499999999998888887766544
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.77 E-value=0.24 Score=48.01 Aligned_cols=69 Identities=16% Similarity=0.177 Sum_probs=48.0
Q ss_pred cCeEEEEecCCccCCCCC--CCCCC-C-cchh--------hhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhh
Q 003508 467 NNRLLILGFNATLTEPVD--TPGRR-G-DQIR--------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 534 (814)
Q Consensus 467 ~~~li~lD~DGTL~~~~~--~p~~~-~-~~~~--------~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~ 534 (814)
++.++++|+||||+.... .+... . +.+. .....+-|.+.+.|..|.+ +..++|+|+.+...++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 357899999999998632 11110 0 0000 1223557899999999974 6999999999999988877
Q ss_pred ccc
Q 003508 535 QEY 537 (814)
Q Consensus 535 ~~~ 537 (814)
..+
T Consensus 79 ~~l 81 (148)
T smart00577 79 DLL 81 (148)
T ss_pred HHh
Confidence 664
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=92.68 E-value=0.31 Score=49.21 Aligned_cols=38 Identities=18% Similarity=0.392 Sum_probs=33.2
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 645 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 645 nKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
+|+.+++++++.++ .+++.++++|| +.+|.+|++.++.
T Consensus 147 ~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~D~~~a~~ag~ 184 (201)
T TIGR01491 147 NKGEAVERLKRELN------PSLTETVAVGD-SKNDLPMFEVADI 184 (201)
T ss_pred cHHHHHHHHHHHhC------CCHHHEEEEcC-CHhHHHHHHhcCC
Confidence 49999999998877 46788999999 9999999999864
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.57 E-value=0.18 Score=51.24 Aligned_cols=36 Identities=17% Similarity=0.122 Sum_probs=24.2
Q ss_pred CCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcc
Q 003508 499 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 536 (814)
Q Consensus 499 ~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~ 536 (814)
.+-|.+.+.|..|.+ . ..++|+||.....++..+..
T Consensus 68 ~~~pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~ 103 (205)
T PRK13582 68 DPLPGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQ 103 (205)
T ss_pred CCCCCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHH
Confidence 345667777777766 3 67777777777777666554
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=92.45 E-value=0.28 Score=49.01 Aligned_cols=70 Identities=16% Similarity=0.165 Sum_probs=48.4
Q ss_pred CeEEEEecCCccCCCCC-----CCCCCCcchh-------hhccCCChhHHHHHHHhhcCCCceEEEEcCC-ChHHHHHhh
Q 003508 468 NRLLILGFNATLTEPVD-----TPGRRGDQIR-------EMELKLHPDLKQPLNALCHDPKTTIVVLSGS-DRNVLDKNF 534 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~-----~p~~~~~~~~-------~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR-~~~~l~~~~ 534 (814)
.||++||+|+||-...- -|-+..++.. .....+-|.+.++|+.|.+ .|.+++|+|+. +...++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 47999999999987531 1111111111 1234577899999999998 59999999998 777777666
Q ss_pred cccC
Q 003508 535 QEYN 538 (814)
Q Consensus 535 ~~~~ 538 (814)
+.++
T Consensus 81 ~~~~ 84 (174)
T TIGR01685 81 GTFE 84 (174)
T ss_pred HhCC
Confidence 5543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=92.38 E-value=22 Score=40.00 Aligned_cols=72 Identities=14% Similarity=0.148 Sum_probs=49.5
Q ss_pred ecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCc----ccccC--CceEEECCC--CHH
Q 003508 321 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA----AQSLG--AGAILVNPW--NIT 392 (814)
Q Consensus 321 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~----~e~lg--~~~~lvnP~--d~~ 392 (814)
+.+++++. .+|..||++| .+-|+ -+..|+++++ .|+|+.-..+- +..+. ..|+.+++. +.+
T Consensus 292 ~~~~~p~~---~ll~~~d~~I---~hgG~-~t~~eal~~G----vP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 292 VVDFVPHD---WLLPRCAAVV---HHGGA-GTTAAALRAG----VPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred EeCCCCHH---HHhhhhheee---ecCCc-hhHHHHHHcC----CCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 45677765 4578899999 45665 4679999995 77777765542 22221 234555554 789
Q ss_pred HHHHHHHHHhc
Q 003508 393 EVANAIARALN 403 (814)
Q Consensus 393 ~lA~ai~~~L~ 403 (814)
++++++.++|+
T Consensus 361 ~l~~al~~~l~ 371 (401)
T cd03784 361 RLAAALRRLLD 371 (401)
T ss_pred HHHHHHHHHhC
Confidence 99999999997
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=92.33 E-value=0.73 Score=45.74 Aligned_cols=90 Identities=16% Similarity=0.175 Sum_probs=47.8
Q ss_pred HHHHHHHHHhccCCCceeeeccceEEEEeccCChhhhHHHHHHHHHHHhcCC-CCCCceEEEEcCcEEEEEECCCCHHHH
Q 003508 571 SLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGP-ISNASVEVVQGSKSVEVRAVGVTKGAA 649 (814)
Q Consensus 571 ~v~~i~~~~~~~~~g~~iE~K~~~v~~hyr~~d~e~~~~~a~~l~~~l~~~~-~~~~~~~v~~g~~~vEI~p~gvnKG~a 649 (814)
.+..+++.+.+ +++.++.--|...|+. |+++++.| .-. ...........-..+||-|. +|-.=
T Consensus 49 dv~~iL~~L~~---------~gv~lavASRt~~P~~----A~~~L~~l-~i~~~~~~~~~~~~~F~~~eI~~g--sK~~H 112 (169)
T PF12689_consen 49 DVPEILQELKE---------RGVKLAVASRTDEPDW----ARELLKLL-EIDDADGDGVPLIEYFDYLEIYPG--SKTTH 112 (169)
T ss_dssp THHHHHHHHHH---------CT--EEEEE--S-HHH----HHHHHHHT-T-C----------CCECEEEESSS---HHHH
T ss_pred CHHHHHHHHHH---------CCCEEEEEECCCChHH----HHHHHHhc-CCCccccccccchhhcchhheecC--chHHH
Confidence 45556665543 4556666666555654 45666665 211 01112223333456899886 99999
Q ss_pred HHHHHHHhcccccCCCCCceEEEEeCCCCCcHH
Q 003508 650 IDRILAEIVHSKKMKTAIDYVLCIGHFLGKDED 682 (814)
Q Consensus 650 v~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~ 682 (814)
.++|.+..+ ++.+.+++|=|+..|.++
T Consensus 113 f~~i~~~tg------I~y~eMlFFDDe~~N~~~ 139 (169)
T PF12689_consen 113 FRRIHRKTG------IPYEEMLFFDDESRNIEV 139 (169)
T ss_dssp HHHHHHHH---------GGGEEEEES-HHHHHH
T ss_pred HHHHHHhcC------CChhHEEEecCchhccee
Confidence 999999887 688999999995555444
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=92.13 E-value=0.38 Score=51.06 Aligned_cols=63 Identities=14% Similarity=0.159 Sum_probs=42.3
Q ss_pred cCeEEEEecCCccCCCCCCCCC-------C-Ccchh-----hhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHH
Q 003508 467 NNRLLILGFNATLTEPVDTPGR-------R-GDQIR-----EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 530 (814)
Q Consensus 467 ~~~li~lD~DGTL~~~~~~p~~-------~-~~~~~-----~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l 530 (814)
.+-+++||+|+|+++..+.-.. . ...+. ...+.+-|.+++..+.|.+ .|.+|+++|||+-..-
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~-~G~kIf~VSgR~e~~r 175 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVS-LGFKIIFLSGRLKDKQ 175 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHH-CCCEEEEEeCCchhHH
Confidence 3568999999999954210000 0 00011 1245667899999999987 6999999999986543
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=92.05 E-value=0.24 Score=48.92 Aligned_cols=40 Identities=18% Similarity=0.317 Sum_probs=34.5
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhc
Q 003508 641 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 687 (814)
Q Consensus 641 p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~ 687 (814)
+.+.+|+.+++.+++..+ .+.+.++++|| +.||.+|++.+
T Consensus 138 ~~~~~K~~~l~~~~~~~~------~~~~~~~~iGD-s~~D~~~~~~a 177 (177)
T TIGR01488 138 PEGECKGKVLKELLEESK------ITLKKIIAVGD-SVNDLPMLKLA 177 (177)
T ss_pred CCcchHHHHHHHHHHHhC------CCHHHEEEEeC-CHHHHHHHhcC
Confidence 567899999999998876 45788999999 99999999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=91.89 E-value=0.11 Score=51.51 Aligned_cols=37 Identities=14% Similarity=0.183 Sum_probs=25.5
Q ss_pred ChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC
Q 003508 501 HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 538 (814)
Q Consensus 501 ~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~ 538 (814)
.+.+.+.|+.|.+ .|..++|+||.....++.++..++
T Consensus 75 ~~g~~~~l~~l~~-~g~~~~ivS~~~~~~i~~~~~~~g 111 (177)
T TIGR01488 75 RPGARELISWLKE-RGIDTVIVSGGFDFFVEPVAEKLG 111 (177)
T ss_pred CcCHHHHHHHHHH-CCCEEEEECCCcHHHHHHHHHHcC
Confidence 4556777777766 477788888877777777666543
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=91.78 E-value=0.65 Score=54.94 Aligned_cols=63 Identities=16% Similarity=0.260 Sum_probs=46.7
Q ss_pred hccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCc-eEEEEcCCChHHHHHhhcccCc
Q 003508 465 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKT-TIVVLSGSDRNVLDKNFQEYNL 539 (814)
Q Consensus 465 ~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~-~V~IvSGR~~~~l~~~~~~~~l 539 (814)
......+++-.||++..... ....+-|++.++|++|.+ .|. +++|+||.+....+...+.+++
T Consensus 339 ~~~~~~~~v~~~~~~~g~i~-----------~~d~l~~~~~e~i~~L~~-~Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 339 SAGKTIVHVARDGTYLGYIL-----------LSDEPRPDAAEAIAELKA-LGIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred hCCCeEEEEEECCEEEEEEE-----------EeccchHHHHHHHHHHHH-cCCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 34456677778888775421 133567899999999988 588 9999999999888877766443
|
. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.67 E-value=0.11 Score=50.12 Aligned_cols=39 Identities=21% Similarity=0.092 Sum_probs=36.0
Q ss_pred CCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 644 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 644 vnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
-+|-.+.+.|+++++ +.++.+.|+|| |.+|.++|+.++-
T Consensus 82 ~dK~~a~~~L~~~~~------l~~e~~ayiGD-D~~Dlpvm~~vGl 120 (170)
T COG1778 82 SDKLAAFEELLKKLN------LDPEEVAYVGD-DLVDLPVMEKVGL 120 (170)
T ss_pred HhHHHHHHHHHHHhC------CCHHHhhhhcC-ccccHHHHHHcCC
Confidence 489999999999998 57899999999 9999999999975
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.35 E-value=28 Score=38.95 Aligned_cols=83 Identities=20% Similarity=0.204 Sum_probs=56.3
Q ss_pred HHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcc--cc------c--CCceEEECCCC--HHHHH
Q 003508 328 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--QS------L--GAGAILVNPWN--ITEVA 395 (814)
Q Consensus 328 ~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~--e~------l--g~~~~lvnP~d--~~~lA 395 (814)
+++.++|+.||+.+.=| =++++-|..+++ .|.|+=-+...+ ++ + -..|+.+.-.+ .+.++
T Consensus 244 ~dm~~~~~~ADLvIsRa----Ga~Ti~E~~a~g----~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~ 315 (357)
T COG0707 244 DDMAALLAAADLVISRA----GALTIAELLALG----VPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLA 315 (357)
T ss_pred hhHHHHHHhccEEEeCC----cccHHHHHHHhC----CCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHH
Confidence 56999999999988755 247899999995 677776666552 22 2 13456665544 88999
Q ss_pred HHHHHHhcCCHHHHHHHHHHHhHH
Q 003508 396 NAIARALNMSPEEREKRHWHNFTH 419 (814)
Q Consensus 396 ~ai~~~L~~~~~er~~r~~~~~~~ 419 (814)
+.|.++++.+ +...+|..+.+..
T Consensus 316 ~~i~~l~~~~-~~l~~m~~~a~~~ 338 (357)
T COG0707 316 ELILRLLSNP-EKLKAMAENAKKL 338 (357)
T ss_pred HHHHHHhcCH-HHHHHHHHHHHhc
Confidence 9999999863 3334443444433
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=91.35 E-value=0.29 Score=47.76 Aligned_cols=55 Identities=15% Similarity=0.146 Sum_probs=38.8
Q ss_pred EEEEecCCccCCCCCCCCCCCc--chhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHH
Q 003508 470 LLILGFNATLTEPVDTPGRRGD--QIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 530 (814)
Q Consensus 470 li~lD~DGTL~~~~~~p~~~~~--~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l 530 (814)
++++|+||||+...- .++ .+. ......+.+.++.+++++ +|..++=+|+|+....
T Consensus 1 VVvsDIDGTiT~SD~----~G~i~~~~-G~d~~h~g~~~l~~~i~~-~GY~ilYlTaRp~~qa 57 (157)
T PF08235_consen 1 VVVSDIDGTITKSDV----LGHILPIL-GKDWTHPGAAELYRKIAD-NGYKILYLTARPIGQA 57 (157)
T ss_pred CEEEeccCCcCccch----hhhhhhcc-CchhhhhcHHHHHHHHHH-CCeEEEEECcCcHHHH
Confidence 378999999997510 010 000 112566889999999988 6999999999998654
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.53 Score=50.21 Aligned_cols=17 Identities=12% Similarity=0.180 Sum_probs=14.7
Q ss_pred ccCeEEEEecCCccCCC
Q 003508 466 SNNRLLILGFNATLTEP 482 (814)
Q Consensus 466 s~~~li~lD~DGTL~~~ 482 (814)
-..++++||+||||++.
T Consensus 22 ~~~k~vIFDlDGTLvDS 38 (260)
T PLN03243 22 CGWLGVVLEWEGVIVED 38 (260)
T ss_pred CCceEEEEeCCCceeCC
Confidence 35688999999999986
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=90.67 E-value=0.55 Score=48.38 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=30.7
Q ss_pred cCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhccc
Q 003508 498 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 537 (814)
Q Consensus 498 ~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~ 537 (814)
..+.|.+.+.|+.|.+ .+.+++|+||.....++.++..+
T Consensus 69 ~~l~pg~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 69 AEIREGFREFVAFINE-HGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred CcccccHHHHHHHHHH-CCCeEEEECCCcHHHHHHHHHhh
Confidence 4567788888888877 58899999999888887777653
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=90.42 E-value=0.029 Score=58.66 Aligned_cols=85 Identities=8% Similarity=0.096 Sum_probs=50.8
Q ss_pred ccCeEEEEecCCccCCCCCC------------CCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHh
Q 003508 466 SNNRLLILGFNATLTEPVDT------------PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 533 (814)
Q Consensus 466 s~~~li~lD~DGTL~~~~~~------------p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~ 533 (814)
-++.+++||+|+|+++..+. |.....-+......+-|.+++.++.+.+ .|..|+++|||+...-+.-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~-~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARS-RGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHH-TTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHH-CCCeEEEEecCCchhHHHH
Confidence 35678999999998853211 1000000001123445568899999998 5999999999988754444
Q ss_pred hccc-CceEEccCcEEEEe
Q 003508 534 FQEY-NLWLAAENGMFLRC 551 (814)
Q Consensus 534 ~~~~-~l~lia~hG~~i~~ 551 (814)
...+ ..|+.+-.+..++.
T Consensus 149 ~~nL~~~G~~~~~~l~lr~ 167 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRP 167 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEE
T ss_pred HHHHHHcCCCccchhcccc
Confidence 3333 23333445556654
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=90.35 E-value=0.61 Score=46.40 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=30.3
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhcc
Q 003508 641 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 641 p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~ 688 (814)
+.|..|+..++++++.. ++.+++||| +.||..|-+.+.
T Consensus 145 ~~g~~K~~~~~~~~~~~---------~~~~i~iGD-~~~D~~aa~~~d 182 (188)
T TIGR01489 145 PCGCCKGKVIHKLSEPK---------YQHIIYIGD-GVTDVCPAKLSD 182 (188)
T ss_pred CCCCCHHHHHHHHHhhc---------CceEEEECC-CcchhchHhcCC
Confidence 56778999988886641 467899999 999998887764
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=90.24 E-value=8.8 Score=43.21 Aligned_cols=99 Identities=11% Similarity=0.069 Sum_probs=61.0
Q ss_pred ecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCCCcccc----c--CCceEEECC--CCHH
Q 003508 321 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS----L--GAGAILVNP--WNIT 392 (814)
Q Consensus 321 ~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~----l--g~~~~lvnP--~d~~ 392 (814)
+.+++++. .++..||++|..+ |.| +..|+++++ .|+|+.-..+--+. + -..|..++. .+.+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~hg---G~~-t~~Eal~~G----~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~ 347 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFITHG---GMN-STMEALFNG----VPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAE 347 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEECC---Cch-HHHHHHHhC----CCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHH
Confidence 45778764 5678999988654 665 679999995 77777654432211 2 123455553 4678
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhHHHHH-cCHHHHHHHH
Q 003508 393 EVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETF 432 (814)
Q Consensus 393 ~lA~ai~~~L~~~~~er~~r~~~~~~~v~~-~~~~~W~~~f 432 (814)
+++++|.++|.++ +.+++.+...+.+.. ......++.+
T Consensus 348 ~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~~i 386 (392)
T TIGR01426 348 KLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAADEI 386 (392)
T ss_pred HHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 9999999999864 334444444444333 3444444433
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=89.97 E-value=0.46 Score=49.41 Aligned_cols=30 Identities=10% Similarity=-0.054 Sum_probs=21.1
Q ss_pred HHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHH
Q 003508 647 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDV 683 (814)
Q Consensus 647 G~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~m 683 (814)
.....++++.++ .+++.+++||| ..+|..+
T Consensus 152 p~~~~~~~~~~~------~~p~~~l~igD-s~~di~a 181 (224)
T PRK14988 152 QRLWQAVAEHTG------LKAERTLFIDD-SEPILDA 181 (224)
T ss_pred HHHHHHHHHHcC------CChHHEEEEcC-CHHHHHH
Confidence 345666677776 45788999999 8877443
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.49 E-value=0.66 Score=48.21 Aligned_cols=39 Identities=23% Similarity=0.267 Sum_probs=31.6
Q ss_pred cCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhccc
Q 003508 498 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 537 (814)
Q Consensus 498 ~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~ 537 (814)
..+-|.+.+.|..|.+ .+..++++|+.+...++..+...
T Consensus 85 ~~~~pGv~~~l~~L~~-~~i~~avaS~s~~~~~~~~L~~~ 123 (221)
T COG0637 85 LKPIPGVVELLEQLKA-RGIPLAVASSSPRRAAERVLARL 123 (221)
T ss_pred CCCCccHHHHHHHHHh-cCCcEEEecCChHHHHHHHHHHc
Confidence 3567788999999988 47899999999988887777654
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.34 E-value=0.42 Score=47.88 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=38.7
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCC
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 525 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR 525 (814)
.++||+|-||||.-..++ .-+++ ++-...+.++++|.+|.+ .+..++|+|--
T Consensus 5 ~k~lflDRDGtin~d~~~---yv~~~--~~~~~~~g~i~al~~l~~-~gy~lVvvTNQ 56 (181)
T COG0241 5 QKALFLDRDGTINIDKGD---YVDSL--DDFQFIPGVIPALLKLQR-AGYKLVVVTNQ 56 (181)
T ss_pred CcEEEEcCCCceecCCCc---ccCcH--HHhccCccHHHHHHHHHh-CCCeEEEEECC
Confidence 678999999999854220 00111 455678899999999997 69999999963
|
|
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=89.31 E-value=13 Score=41.34 Aligned_cols=195 Identities=14% Similarity=0.158 Sum_probs=101.7
Q ss_pred ChhHHHHHHHhccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhh
Q 003508 455 READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNF 534 (814)
Q Consensus 455 ~~~~~~~~y~~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~ 534 (814)
|+.++..--+...-+|+-||=|+||-++.. .-..+..++.-|-+|-+ .|..|.|||.=.+....++.
T Consensus 134 N~AQi~al~~~~~L~LvTFDgDvTLY~DG~------------sl~~d~pvi~~ii~LL~-~gv~VgIVTAAGY~~a~kY~ 200 (408)
T PF06437_consen 134 NTAQIMALAKNYGLKLVTFDGDVTLYEDGA------------SLEPDNPVIPRIIKLLR-RGVKVGIVTAAGYPGAEKYE 200 (408)
T ss_pred HHHHHHHhcccCCceEEEEcCCcccccCCC------------CCCCCchHHHHHHHHHh-cCCeEEEEeCCCCCChHHHH
Confidence 444444444444678999999999998732 22345556666666666 49999999987766544332
Q ss_pred ccc-------------------Cc-eEEccCcEEEEeCC-----------CceeecccccCChHHH--------HHHHHH
Q 003508 535 QEY-------------------NL-WLAAENGMFLRCTT-----------GKWMTTMPEHLNMEWV--------DSLKHV 575 (814)
Q Consensus 535 ~~~-------------------~l-~lia~hG~~i~~~~-----------~~~~~~~~~~~~~~~~--------~~v~~i 575 (814)
..+ ++ .+-||--+.++... +.|... ....|. +.++..
T Consensus 201 ~RL~GLL~a~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~----~m~~W~~~dI~~lLD~AE~~ 276 (408)
T PF06437_consen 201 ERLHGLLDAFKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLP----EMKTWSEEDITELLDIAEAA 276 (408)
T ss_pred HHHHHHHHHHHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCc----cccCcCHHHHHHHHHHHHHH
Confidence 211 22 24455555555321 234321 112342 233333
Q ss_pred HHHHhcc--CCCceeeeccceEEEEeccCChhhhHHHHHHH----HHHHhcCC--CCCCceEEEEcCc--EEEEEECCCC
Q 003508 576 FEYFTER--TPRSHFEQRETSLVWNYKYADVEFGRIQARDM----LQHLWTGP--ISNASVEVVQGSK--SVEVRAVGVT 645 (814)
Q Consensus 576 ~~~~~~~--~~g~~iE~K~~~v~~hyr~~d~e~~~~~a~~l----~~~l~~~~--~~~~~~~v~~g~~--~vEI~p~gvn 645 (814)
++....+ .| ..|-.|+-++-+--. ........|.+|+ ...| +.. ....++-...|.. +|+| -|
T Consensus 277 L~~~~~~l~Lp-a~IiRK~RAVGivP~-~~~ki~rE~LEE~VL~vq~~L-~~~~~~~~ipfCAFNGGsDVwVDI----Gd 349 (408)
T PF06437_consen 277 LRDCVKRLNLP-ATIIRKERAVGIVPK-PGVKIIREQLEEIVLTVQKTL-EESPPGRRIPFCAFNGGSDVWVDI----GD 349 (408)
T ss_pred HHHHHHHcCCC-eeEEeecceeeEecC-CCCcchhhhHHHHHHHHHHHH-HhcCCCCCCceeeecCCcceEEEc----CC
Confidence 3333332 34 445566655543211 1101111233332 3333 221 1123555555532 4555 37
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEeC
Q 003508 646 KGAAIDRILAEIVHSKKMKTAIDYVLCIGH 675 (814)
Q Consensus 646 KG~av~~ll~~~~~~~~~~~~~d~vl~iGD 675 (814)
|.-+|+.+.+.+.-.+ .+.+..++-+||
T Consensus 350 Ks~GV~~lQ~y~~~~~--~i~~~~tLHVGD 377 (408)
T PF06437_consen 350 KSLGVRALQKYFDPEG--GIKPSETLHVGD 377 (408)
T ss_pred cHHhHHHHHHHHHhcc--CCCccceeeehh
Confidence 9999999888882111 156889999999
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=88.40 E-value=3 Score=44.93 Aligned_cols=97 Identities=13% Similarity=0.077 Sum_probs=60.5
Q ss_pred CCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003508 239 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 318 (814)
Q Consensus 239 ~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V 318 (814)
.+++++..|-.++.+.....++|+..+. +++ .+..|.+++. +.+ +++++.+.. + + .|
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~----~i~vv~G~~~---~~~----~~l~~~~~~-~---~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAESQ---INI----SITLVTGSSN---PNL----DELKKFAKE-Y---P-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhccc---cCc----eEEEEECCCC---cCH----HHHHHHHHh-C---C-----CE
Confidence 3578999999999886777788876542 222 2333343332 222 334444432 1 1 24
Q ss_pred EEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEe
Q 003508 319 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS 370 (814)
Q Consensus 319 ~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS 370 (814)
. +.++ .+++..+|..||+++.+ -|.+..|+++++ .|.|+-
T Consensus 227 ~-~~~~--~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g----~P~i~i 266 (279)
T TIGR03590 227 I-LFID--VENMAELMNEADLAIGA-----AGSTSWERCCLG----LPSLAI 266 (279)
T ss_pred E-EEeC--HHHHHHHHHHCCEEEEC-----CchHHHHHHHcC----CCEEEE
Confidence 4 2333 46899999999999984 458999999995 555543
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=88.18 E-value=0.8 Score=50.47 Aligned_cols=49 Identities=14% Similarity=0.154 Sum_probs=35.9
Q ss_pred EEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCC----CceEEEEc---CCChHHHHHhh
Q 003508 470 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDP----KTTIVVLS---GSDRNVLDKNF 534 (814)
Q Consensus 470 li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~----~~~V~IvS---GR~~~~l~~~~ 534 (814)
.++||+||||... ..+-+...++|+.|.. . +..+.++| |++...+.+.+
T Consensus 2 ~~ifD~DGvL~~g---------------~~~i~ga~eal~~L~~-~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFRG---------------KKPIAGASDALRRLNR-NQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceECC---------------ccccHHHHHHHHHHhc-cccccCCCEEEEecCCCCCHHHHHHHH
Confidence 5889999999975 2346788999999987 4 67777666 66666654443
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=88.04 E-value=1.1 Score=49.26 Aligned_cols=62 Identities=23% Similarity=0.312 Sum_probs=46.9
Q ss_pred CeEEEEecCCccCCCC--CC-CCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcc
Q 003508 468 NRLLILGFNATLTEPV--DT-PGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 536 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~--~~-p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~ 536 (814)
.|+|++|+|+||..-+ ++ + ..+ .-..+.+.+.+.|++|.+ .|..++|+|..+...+...+..
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~g~----~~i--~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGEDGI----DNL--NLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred eEEEEEcCCCCCCCCEEccCCc----ccc--ccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHh
Confidence 5899999999998653 11 1 000 011245789999999987 5999999999999999888876
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=87.89 E-value=1.3 Score=45.74 Aligned_cols=37 Identities=16% Similarity=0.309 Sum_probs=28.2
Q ss_pred CCChhHHHHHH-HhhcCCCceEEEEcCCChHHHHHhhcc
Q 003508 499 KLHPDLKQPLN-ALCHDPKTTIVVLSGSDRNVLDKNFQE 536 (814)
Q Consensus 499 ~~~~~~~~~L~-~L~~~~~~~V~IvSGR~~~~l~~~~~~ 536 (814)
.+-|.+.+.|+ .|.+ .|..++|||+-+...++++...
T Consensus 94 ~l~pga~e~L~~~l~~-~G~~v~IvSas~~~~~~~ia~~ 131 (210)
T TIGR01545 94 TAFPLVAERLRQYLES-SDADIWLITGSPQPLVEAVYFD 131 (210)
T ss_pred CCCccHHHHHHHHHHh-CCCEEEEEcCCcHHHHHHHHHh
Confidence 35678888885 6665 4889999999888888777644
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=87.59 E-value=0.85 Score=46.77 Aligned_cols=39 Identities=13% Similarity=0.072 Sum_probs=28.8
Q ss_pred CCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCc
Q 003508 499 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 539 (814)
Q Consensus 499 ~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l 539 (814)
.+.|.+.+.|+.|.+. .+++|+||-....+++.+..+++
T Consensus 68 ~l~pga~ell~~lk~~--~~~~IVS~~~~~~~~~il~~lgi 106 (203)
T TIGR02137 68 KPLEGAVEFVDWLRER--FQVVILSDTFYEFSQPLMRQLGF 106 (203)
T ss_pred CCCccHHHHHHHHHhC--CeEEEEeCChHHHHHHHHHHcCC
Confidence 5677888888888773 48888888877777777666543
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=87.33 E-value=1 Score=50.64 Aligned_cols=17 Identities=12% Similarity=0.089 Sum_probs=14.7
Q ss_pred ccCeEEEEecCCccCCC
Q 003508 466 SNNRLLILGFNATLTEP 482 (814)
Q Consensus 466 s~~~li~lD~DGTL~~~ 482 (814)
...+.++||+||||++.
T Consensus 129 ~~~~~VIFDlDGTLIDS 145 (381)
T PLN02575 129 CGWLGAIFEWEGVIIED 145 (381)
T ss_pred CCCCEEEEcCcCcceeC
Confidence 46788999999999975
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.87 E-value=9.8 Score=41.30 Aligned_cols=124 Identities=18% Similarity=0.207 Sum_probs=83.4
Q ss_pred CCeEEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEE-EecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCccc
Q 003508 239 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ-IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 317 (814)
Q Consensus 239 ~~~vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~-vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~ 317 (814)
++..|+-=-.=|++-++...|+++.+.... ++.++. .+.|+ ++ +++.+++++.+.++ ||.. .
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-gn----~~Yi~~V~~~~~~l---F~~~---~ 207 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-NN----QAYIEEVRQAGLAL---FGAE---N 207 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-CC----HHHHHHHHHHHHHh---cCcc---c
Confidence 344454444668888999988888776532 233432 23332 22 34577777776664 5532 3
Q ss_pred EEEecCCCCHHHHHHHHHhccEEEECCC-CccCChhHHHHhhhccCCCceEEEeCCCCcccccCCceE
Q 003508 318 IHHLDRSLDFPALCALYAVTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAI 384 (814)
Q Consensus 318 V~~~~g~v~~~el~aly~~ADv~v~~S~-~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~lg~~~~ 384 (814)
+..++..++.+|+.++++.+|+.++.-- .+|+|..++=- .. |.|+++++..-.-..+.+-|+
T Consensus 208 ~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi-~~----G~~v~l~r~n~fwqdl~e~gv 270 (322)
T PRK02797 208 FQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLI-QL----GKPVVLSRDNPFWQDLTEQGL 270 (322)
T ss_pred EEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHH-HC----CCcEEEecCCchHHHHHhCCC
Confidence 6668899999999999999999999886 59999876543 33 478999987777766633343
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=86.83 E-value=0.61 Score=45.54 Aligned_cols=67 Identities=18% Similarity=0.265 Sum_probs=43.1
Q ss_pred eEEEEecCCccCCCCCCCCCCCcc-----hhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhccc
Q 003508 469 RLLILGFNATLTEPVDTPGRRGDQ-----IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 537 (814)
Q Consensus 469 ~li~lD~DGTL~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~ 537 (814)
++|+||+||||+.....+....+. .......+-|.+.+.|+.|++ ...|+|.|..+.......+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 579999999999765432110000 001223467889999999976 6999999999998888777665
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=85.99 E-value=1.8 Score=50.38 Aligned_cols=46 Identities=17% Similarity=0.186 Sum_probs=36.8
Q ss_pred CChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccCc--eEEccCc
Q 003508 500 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL--WLAAENG 546 (814)
Q Consensus 500 ~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~l--~lia~hG 546 (814)
+.|++.+.|+++.+ .|.+++|+|+.+...++.....+++ .++|.++
T Consensus 73 ~~pga~e~L~~lk~-~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~ 120 (479)
T PRK08238 73 YNEEVLDYLRAERA-AGRKLVLATASDERLAQAVAAHLGLFDGVFASDG 120 (479)
T ss_pred CChhHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCC
Confidence 55899999999987 5999999999999999888777653 3444443
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=85.94 E-value=85 Score=37.53 Aligned_cols=66 Identities=21% Similarity=0.224 Sum_probs=44.5
Q ss_pred HHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeC-------------------CCCccccc-CCceE--EE--
Q 003508 331 CALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-------------------FAGAAQSL-GAGAI--LV-- 386 (814)
Q Consensus 331 ~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~-------------------~~G~~e~l-g~~~~--lv-- 386 (814)
..++++||+.+.+| |.+.+|++.++ .|.|+.- +.|....+ |+..+ ++
T Consensus 483 ~~~m~aaD~aLaaS-----GTaTLEaAL~g----~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqg 553 (608)
T PRK01021 483 YELMRECDCALAKC-----GTIVLETALNQ----TPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGG 553 (608)
T ss_pred HHHHHhcCeeeecC-----CHHHHHHHHhC----CCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCC
Confidence 68999999999999 89999999995 6666642 22333222 22211 22
Q ss_pred -CCCCHHHHHHHHHHHhcCCH
Q 003508 387 -NPWNITEVANAIARALNMSP 406 (814)
Q Consensus 387 -nP~d~~~lA~ai~~~L~~~~ 406 (814)
+-.+++.+|+++ +.|.+++
T Consensus 554 Q~~~tpe~La~~l-~lL~d~~ 573 (608)
T PRK01021 554 KKDFQPEEVAAAL-DILKTSQ 573 (608)
T ss_pred cccCCHHHHHHHH-HHhcCHH
Confidence 345688999986 7776553
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=85.86 E-value=7.5 Score=49.02 Aligned_cols=68 Identities=12% Similarity=0.197 Sum_probs=49.1
Q ss_pred HHHHHHhccCeEEEEecCC-----ccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHh
Q 003508 459 SIERYLRSNNRLLILGFNA-----TLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKN 533 (814)
Q Consensus 459 ~~~~y~~s~~~li~lD~DG-----TL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~ 533 (814)
..+.|.+...|.+++=|++ |++.... ..-.+-+++.++|++|.+ .|.+++++||-........
T Consensus 494 ~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~-----------l~Dp~r~~~~~~i~~l~~-~Gi~v~miTGD~~~tA~~i 561 (884)
T TIGR01522 494 EAAEMASAGLRVIAFASGPEKGQLTFLGLVG-----------INDPPRPGVKEAVTTLIT-GGVRIIMITGDSQETAVSI 561 (884)
T ss_pred HHHHHHhcCCEEEEEEEEcCCCCeEEEEEEe-----------ccCcchhHHHHHHHHHHH-CCCeEEEECCCCHHHHHHH
Confidence 3445666667888887776 4443211 112356889999999987 6999999999999999887
Q ss_pred hcccC
Q 003508 534 FQEYN 538 (814)
Q Consensus 534 ~~~~~ 538 (814)
...++
T Consensus 562 a~~~G 566 (884)
T TIGR01522 562 ARRLG 566 (884)
T ss_pred HHHcC
Confidence 77654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.70 E-value=0.94 Score=48.41 Aligned_cols=53 Identities=13% Similarity=0.251 Sum_probs=39.8
Q ss_pred CeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCC---ChHHHHHhhcc
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS---DRNVLDKNFQE 536 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR---~~~~l~~~~~~ 536 (814)
...++||+||||..- ..+=|...++|++|.+ .|.+++++|-. +.+.+.+.+..
T Consensus 8 y~~~l~DlDGvl~~G---------------~~~ipga~e~l~~L~~-~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 8 YDGFLFDLDGVLYRG---------------NEAIPGAAEALKRLKA-AGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred cCEEEEcCcCceEeC---------------CccCchHHHHHHHHHH-cCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 356999999999964 3455789999999998 58999999854 45545555544
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=85.68 E-value=1.4 Score=43.24 Aligned_cols=71 Identities=18% Similarity=0.135 Sum_probs=50.9
Q ss_pred hccCeEEEEecCCccCCCCCCCCCCCcc-------------------h--hhhccCCChhHHHHHHHhhcCCCceEEEEc
Q 003508 465 RSNNRLLILGFNATLTEPVDTPGRRGDQ-------------------I--REMELKLHPDLKQPLNALCHDPKTTIVVLS 523 (814)
Q Consensus 465 ~s~~~li~lD~DGTL~~~~~~p~~~~~~-------------------~--~~~~~~~~~~~~~~L~~L~~~~~~~V~IvS 523 (814)
+.++..+++|+|.||+.....|...... + ......+-|.+.+.|++|++ +..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~--~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASK--LYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHh--hcEEEEEe
Confidence 3567789999999999876554211100 0 00123456899999999985 69999999
Q ss_pred CCChHHHHHhhccc
Q 003508 524 GSDRNVLDKNFQEY 537 (814)
Q Consensus 524 GR~~~~l~~~~~~~ 537 (814)
.-+....+..+..+
T Consensus 81 ~~~~~yA~~vl~~l 94 (156)
T TIGR02250 81 MGTRAYAQAIAKLI 94 (156)
T ss_pred CCcHHHHHHHHHHh
Confidence 99999888877766
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=85.62 E-value=45 Score=37.24 Aligned_cols=33 Identities=12% Similarity=0.090 Sum_probs=27.4
Q ss_pred HHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeC
Q 003508 330 LCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE 371 (814)
Q Consensus 330 l~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~ 371 (814)
...+|+.||+.+..| |.+.+|++.++ .|.|+.-
T Consensus 229 ~~~~m~~aDlal~~S-----GT~TLE~al~g----~P~Vv~Y 261 (347)
T PRK14089 229 THKALLEAEFAFICS-----GTATLEAALIG----TPFVLAY 261 (347)
T ss_pred HHHHHHhhhHHHhcC-----cHHHHHHHHhC----CCEEEEE
Confidence 467899999999999 88999999995 6766643
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=85.56 E-value=1.1 Score=50.56 Aligned_cols=36 Identities=17% Similarity=0.232 Sum_probs=29.9
Q ss_pred CCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhc
Q 003508 499 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 535 (814)
Q Consensus 499 ~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~ 535 (814)
.+-|.+.+.|+.|.+ .+.+++|+|+.+...+...+.
T Consensus 93 ~l~pGv~elL~~Lk~-~g~~l~IvTn~~~~~~~~~l~ 128 (382)
T PLN02940 93 KALPGANRLIKHLKS-HGVPMALASNSPRANIEAKIS 128 (382)
T ss_pred CCCcCHHHHHHHHHH-CCCcEEEEeCCcHHHHHHHHH
Confidence 456778889999987 599999999999888876664
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=84.86 E-value=0.79 Score=46.18 Aligned_cols=37 Identities=14% Similarity=0.061 Sum_probs=27.2
Q ss_pred ChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcccC
Q 003508 501 HPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 538 (814)
Q Consensus 501 ~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~~ 538 (814)
-|.+.+.|+.|.+ .|..++|+||.....++..+..++
T Consensus 82 ~~g~~e~l~~l~~-~g~~~~IvS~~~~~~~~~~l~~~g 118 (201)
T TIGR01491 82 RDYAEELVRWLKE-KGLKTAIVSGGIMCLAKKVAEKLN 118 (201)
T ss_pred CccHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHHhC
Confidence 3567778888876 478888888888777777766654
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=84.70 E-value=1.9 Score=44.42 Aligned_cols=16 Identities=6% Similarity=0.138 Sum_probs=13.8
Q ss_pred cCeEEEEecCCccCCC
Q 003508 467 NNRLLILGFNATLTEP 482 (814)
Q Consensus 467 ~~~li~lD~DGTL~~~ 482 (814)
..++++|||||||++.
T Consensus 11 ~~k~viFDfDGTL~~~ 26 (224)
T PLN02954 11 SADAVCFDVDSTVCVD 26 (224)
T ss_pred cCCEEEEeCCCcccch
Confidence 3688999999999975
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.60 E-value=2.1 Score=40.14 Aligned_cols=22 Identities=14% Similarity=0.084 Sum_probs=19.8
Q ss_pred CCceEEEEeCCCCCcHHHHHhcc
Q 003508 666 AIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 666 ~~d~vl~iGD~d~nDe~mf~~~~ 688 (814)
+..+++++|| +.||+-|++.+.
T Consensus 92 ~~~k~vmVGn-GaND~laLr~AD 113 (152)
T COG4087 92 RYEKVVMVGN-GANDILALREAD 113 (152)
T ss_pred CCcEEEEecC-CcchHHHhhhcc
Confidence 5689999999 999999999874
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=84.13 E-value=1.9 Score=43.85 Aligned_cols=61 Identities=21% Similarity=0.284 Sum_probs=46.2
Q ss_pred ccCeEEEEecCCccCCCC-CCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcc
Q 003508 466 SNNRLLILGFNATLTEPV-DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 536 (814)
Q Consensus 466 s~~~li~lD~DGTL~~~~-~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~ 536 (814)
..+++++||+||||+... ..+. .....-|-+-+-|+.+.+ ...|+|=|..+...++..+..
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~--------~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~ 80 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAET--------GEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTE 80 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCC--------ceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHH
Confidence 456899999999999752 1110 123456789999999987 799999999988888776654
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=84.07 E-value=2.7 Score=52.54 Aligned_cols=67 Identities=15% Similarity=0.192 Sum_probs=47.1
Q ss_pred HHHHHHhccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhccc
Q 003508 459 SIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 537 (814)
Q Consensus 459 ~~~~y~~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~ 537 (814)
..+.+.+...+++++-+||+++.... ....+-|...++|++|.+ .|.+++++||.+....+.....+
T Consensus 621 ~~~~~~~~g~~~v~va~~~~~~g~~~-----------l~d~~r~~a~~~i~~L~~-~gi~v~~~Tgd~~~~a~~ia~~l 687 (834)
T PRK10671 621 EITAQASQGATPVLLAVDGKAAALLA-----------IRDPLRSDSVAALQRLHK-AGYRLVMLTGDNPTTANAIAKEA 687 (834)
T ss_pred HHHHHHhCCCeEEEEEECCEEEEEEE-----------ccCcchhhHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHc
Confidence 34445555677888888998763211 112345678899999987 59999999999888877666553
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.74 E-value=2 Score=44.18 Aligned_cols=37 Identities=11% Similarity=-0.027 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 646 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 646 KG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
|..+++.+++.++ .+++.+++||| ..+|.++.+.++-
T Consensus 151 ~~~~~~~~~~~~~------~~~~~~i~igD-~~~Di~~a~~~g~ 187 (226)
T PRK13222 151 DPAPLLLACEKLG------LDPEEMLFVGD-SRNDIQAARAAGC 187 (226)
T ss_pred ChHHHHHHHHHcC------CChhheEEECC-CHHHHHHHHHCCC
Confidence 5778999999987 46789999999 9999999998854
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=83.39 E-value=4.6 Score=51.72 Aligned_cols=35 Identities=3% Similarity=-0.221 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhc
Q 003508 646 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFF 687 (814)
Q Consensus 646 KG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~ 687 (814)
+......++++++ .+++.+++||| ..+|..+=+.+
T Consensus 220 ~Pe~~~~a~~~lg------v~p~e~v~IgD-s~~Di~AA~~a 254 (1057)
T PLN02919 220 APDIFLAAAKILG------VPTSECVVIED-ALAGVQAARAA 254 (1057)
T ss_pred CHHHHHHHHHHcC------cCcccEEEEcC-CHHHHHHHHHc
Confidence 3567788888887 56789999999 88875554444
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=83.08 E-value=2.2 Score=42.09 Aligned_cols=68 Identities=15% Similarity=0.209 Sum_probs=47.6
Q ss_pred CeEEEEecCCccCCCCCCCCC-CCc---chh------hhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhccc
Q 003508 468 NRLLILGFNATLTEPVDTPGR-RGD---QIR------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY 537 (814)
Q Consensus 468 ~~li~lD~DGTL~~~~~~p~~-~~~---~~~------~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~~ 537 (814)
++.+++|+|+||+.....|.. ..+ .++ ..-...-|.+.+.|..|++ ...++|.|.-+...++..+..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~--~yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSK--WYELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHh--cCEEEEEcCCcHHHHHHHHHHH
Confidence 357999999999976555421 000 000 0123456889999999987 4899999999888888777765
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=82.81 E-value=3.7 Score=49.67 Aligned_cols=70 Identities=10% Similarity=0.158 Sum_probs=51.8
Q ss_pred hHHHHHHHhccCeEEEEecCCccCCCCCCCCCCCcchhhhccCCChhHHHHHHHhhcCCCceEEEEcCCChHHHHHhhcc
Q 003508 457 ADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE 536 (814)
Q Consensus 457 ~~~~~~y~~s~~~li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~l~~~~~~ 536 (814)
+...+.+.+...+.+++-+|++++.... ..-.+-|++.+++++|.+ .|.+++++||-...........
T Consensus 415 ~~~~~~~a~~G~r~l~va~~~~~lG~i~-----------l~D~~Rp~a~eaI~~l~~-~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCEDNRIYGVIY-----------LKDIVKGGIKERFAQLRK-MGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEE-----------ecccchhHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHH
Confidence 3445566666778888888998775321 112356899999999988 5999999999988888777665
Q ss_pred cC
Q 003508 537 YN 538 (814)
Q Consensus 537 ~~ 538 (814)
++
T Consensus 483 lG 484 (675)
T TIGR01497 483 AG 484 (675)
T ss_pred cC
Confidence 44
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=81.90 E-value=36 Score=41.94 Aligned_cols=150 Identities=11% Similarity=0.135 Sum_probs=99.1
Q ss_pred CCeEEEEeccccccCCHHH-HHHHHHHHH--HhCcccc-CceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCC
Q 003508 239 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFL--EENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 314 (814)
Q Consensus 239 ~~~vil~VgRld~~KGi~~-~l~Af~~ll--~~~p~~~-~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~ 314 (814)
+-.+++.+-|++.-|--.+ +|..+.++. ..+|+.. ..+++|..|.+..++... ..+-+.|..++.-||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~a-K~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMA-KHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHH-HHHHHHHHHHHHHhccChhhcC
Confidence 3456778999998887776 777765553 3456521 246777677665555432 3556677777777775322223
Q ss_pred cccEEEecCCCCHHHHHHHHHhccEEEECCC--CccCChhHHHHhhhccCCCceEEEeCCCCccccc-----CCceEEEC
Q 003508 315 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 387 (814)
Q Consensus 315 ~~~V~~~~g~v~~~el~aly~~ADv~v~~S~--~EG~~Lv~lEama~~~~~~g~vVlS~~~G~~e~l-----g~~~~lvn 387 (814)
...|+|+.. .+-.--..++.+|||..-.|. .|.=|..-+=||.- |.+-+|..-|+..++ +++++++-
T Consensus 621 ~lkVVFlen-Y~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alN-----GaLtlgtlDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 621 KLKVVFIPN-YSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALN-----GALTIGTLDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred ceeEEEeCC-CCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhc-----CceeeeccCCchhHHHHhcCCCcEEEeC
Confidence 346887764 455566678999999998887 46666666666664 889999988877544 46888886
Q ss_pred CCCHHHHHH
Q 003508 388 PWNITEVAN 396 (814)
Q Consensus 388 P~d~~~lA~ 396 (814)
. +.+++++
T Consensus 695 ~-~~~ev~~ 702 (815)
T PRK14986 695 N-TAEEVEA 702 (815)
T ss_pred C-CHHHHHH
Confidence 4 4555544
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=81.82 E-value=1.3 Score=44.71 Aligned_cols=42 Identities=19% Similarity=0.150 Sum_probs=35.7
Q ss_pred ECCCCHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhccC
Q 003508 641 AVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 641 p~gvnKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~~ 689 (814)
..+-.|..+++.++++.+ .+.+.++++|| +.+|.+|++.++.
T Consensus 151 ~~g~~K~~~l~~~~~~~~------~~~~~~~~~gD-s~~D~~~~~~a~~ 192 (202)
T TIGR01490 151 CKGEGKVHALAELLAEEQ------IDLKDSYAYGD-SISDLPLLSLVGH 192 (202)
T ss_pred CCChHHHHHHHHHHHHcC------CCHHHcEeeeC-CcccHHHHHhCCC
Confidence 346679999999998876 45778999999 9999999999975
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=81.78 E-value=1.1 Score=45.29 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=21.8
Q ss_pred cCCChhHHHHHHHhhcCCCceEEEEcCCChH
Q 003508 498 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 528 (814)
Q Consensus 498 ~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~ 528 (814)
..|-|.+.++|++|.+ .|..++++|+|+..
T Consensus 72 l~p~~gA~e~l~~L~~-~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRD-KGHEIVIITARPPE 101 (191)
T ss_dssp --B-TTHHHHHHHHHT-STTEEEEEEE-SSS
T ss_pred CCccHHHHHHHHHHHH-cCCcEEEEEecCcc
Confidence 4577899999999998 57788888888754
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=81.78 E-value=96 Score=34.87 Aligned_cols=136 Identities=17% Similarity=0.225 Sum_probs=84.8
Q ss_pred CeEEEEecccccc-CCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccE
Q 003508 240 RKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 318 (814)
Q Consensus 240 ~~vil~VgRld~~-KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V 318 (814)
+-+++..=|-+-. +++...+.|+.++++++|+.. +|- |.--+ +.. ++++ +..++.. ..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----viy---p~H~~-~~v-------~e~~---~~~L~~~--~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VIY---PVHPR-PRV-------RELV---LKRLKNV--ERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EEE---eCCCC-hhh-------hHHH---HHHhCCC--CcE
Confidence 3455667776655 999999999999999997753 331 22111 222 2222 1112221 235
Q ss_pred EEecCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEe-CCCCcccccCCc-eEEECCCCHHHHHH
Q 003508 319 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSLGAG-AILVNPWNITEVAN 396 (814)
Q Consensus 319 ~~~~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS-~~~G~~e~lg~~-~~lvnP~d~~~lA~ 396 (814)
+ +..++...+...|...|-+.+--| |=.--||-.-+ .|+++- +.+-=+|.+..+ .++|+ .|.+.+.+
T Consensus 265 ~-li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg----~Pvl~lR~~TERPE~v~agt~~lvg-~~~~~i~~ 333 (383)
T COG0381 265 K-LIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLG----KPVLVLRDTTERPEGVEAGTNILVG-TDEENILD 333 (383)
T ss_pred E-EeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcC----CcEEeeccCCCCccceecCceEEeC-ccHHHHHH
Confidence 5 446889999999999997766655 33467887773 444443 333334444223 35555 47899999
Q ss_pred HHHHHhcCCH
Q 003508 397 AIARALNMSP 406 (814)
Q Consensus 397 ai~~~L~~~~ 406 (814)
++.++++++.
T Consensus 334 ~~~~ll~~~~ 343 (383)
T COG0381 334 AATELLEDEE 343 (383)
T ss_pred HHHHHhhChH
Confidence 9999998764
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=81.30 E-value=63 Score=38.01 Aligned_cols=108 Identities=19% Similarity=0.221 Sum_probs=77.8
Q ss_pred EEEEeccccccCCHHHHHHHHHHHHHhCccccCceEEEEEecCCCCChHHHHHHHHHHHHHHHHhhcccCCCCcccEEEe
Q 003508 242 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHL 321 (814)
Q Consensus 242 vil~VgRld~~KGi~~~l~Af~~ll~~~p~~~~~v~Lv~vg~p~r~~~~~~~~l~~~l~~lv~~iN~~~g~~~~~~V~~~ 321 (814)
|+++..+ +.|=.++.+.-.-++++.-|+- +|++-+.+ +- .+....++.++++- |. +...++ |
T Consensus 432 Vf~c~~n--~~K~~pev~~~wmqIL~~vP~S----vl~L~~~~---~~---~~~~~~l~~la~~~----Gv-~~eRL~-f 493 (620)
T COG3914 432 VFCCFNN--YFKITPEVFALWMQILSAVPNS----VLLLKAGG---DD---AEINARLRDLAERE----GV-DSERLR-F 493 (620)
T ss_pred EEEecCC--cccCCHHHHHHHHHHHHhCCCc----EEEEecCC---Cc---HHHHHHHHHHHHHc----CC-Chhhee-e
Confidence 4444554 6788899999999999999984 34444432 12 24566677777764 43 334566 4
Q ss_pred cCCCCHHHHHHHHHhccEEEECCCCccCChhHHHHhhhccCCCceEEEeCCC
Q 003508 322 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFA 373 (814)
Q Consensus 322 ~g~v~~~el~aly~~ADv~v~~S~~EG~~Lv~lEama~~~~~~g~vVlS~~~ 373 (814)
.+..+.++..+-|+.||+++-|=-|-| ..++.|++-+ |++|+|..+
T Consensus 494 ~p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm-----~vPVlT~~G 539 (620)
T COG3914 494 LPPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWM-----GVPVLTRVG 539 (620)
T ss_pred cCCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHh-----cCceeeecc
Confidence 678889999999999999998877766 5688999998 677777544
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.15 E-value=1 Score=45.01 Aligned_cols=37 Identities=3% Similarity=-0.198 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHHhcccccCCCCCceEEEEeCCCCCcHHHHHhcc
Q 003508 645 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 645 nKG~av~~ll~~~~~~~~~~~~~d~vl~iGD~d~nDe~mf~~~~ 688 (814)
-+-..+..++++++ .+++.+++||| ..+|.++=+.++
T Consensus 143 P~p~~~~~~~~~~~------~~~~~~l~igD-s~~di~aA~~aG 179 (188)
T PRK10725 143 PAPDTFLRCAQLMG------VQPTQCVVFED-ADFGIQAARAAG 179 (188)
T ss_pred CChHHHHHHHHHcC------CCHHHeEEEec-cHhhHHHHHHCC
Confidence 34567888999887 45788999999 888876655543
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 814 | ||||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 6e-63 | ||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 6e-63 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 4e-61 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 2e-15 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 2e-15 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 1e-14 |
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 658 bits (1701), Expect = 0.0
Identities = 147/458 (32%), Positives = 232/458 (50%), Gaps = 13/458 (2%)
Query: 8 VKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLF 67
+K W GW+G ++ K + K L E + +YYN + N +LWP F
Sbjct: 32 LKAAGGLWFGWSGETGNEDQPLKKVKKG--NITWASFNLSEQDLDEYYNQFSNAVLWPAF 89
Query: 68 HYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK 127
HY RL + + + Y++ N + AD + +D D++W HDYHL+ L+
Sbjct: 90 HY-------RLDLVQFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELR 142
Query: 128 EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 187
+ + ++G+FLH PFP+ EI LP+ LL + DL+GF T + F+ + +
Sbjct: 143 KRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLT 202
Query: 188 GFEGTPEGVED-QGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGV 246
G+ R +PIGI+ + + P+ + +L+ + + V
Sbjct: 203 RVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAA-GPLPPKLAQLKAELKNVQNIFSV 261
Query: 247 DRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 306
+RLD KG+P++ LA+E LE+ GK+ QIA +R DV YQ + Q+ GRI
Sbjct: 262 ERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRI 321
Query: 307 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ-DLKKG 365
NG++G L P+++L++ D L ++ +DV LVT LRDGMNLV+ E+VA Q G
Sbjct: 322 NGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPG 381
Query: 366 VLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTA 425
VL+LS+FAGAA L A++VNP++ EVA A+ RAL MS ER RH + +
Sbjct: 382 VLVLSQFAGAANELT-SALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDI 440
Query: 426 QEWAETFVSELNDTVVEAQLRIKQVPPSLREADSIERY 463
W E F+S+L V + ++ + ++E +
Sbjct: 441 NHWQECFISDLKQIVPRSAESQQRDKVATFPKLALEHH 478
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 616 bits (1590), Expect = 0.0
Identities = 105/463 (22%), Positives = 176/463 (38%), Gaps = 26/463 (5%)
Query: 4 LFEGVKEFEARWIGWAGVNV---PDEIGQKALTKALAEKRCIPVFL---DEDIVHQYYNG 57
+ E WI A + +T L R I V L D + N
Sbjct: 38 VAEQAGVLNISWIASADSEDDRRASALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNF 97
Query: 58 YCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHY--KDGDVVWCH 115
N++W +Y + + + + +A + + + FAD + K V H
Sbjct: 98 MTANLMWAANNYG-WDRWTQPSFGSDAREGWADFGRFTRDFADAILKSSAQSADPVYLVH 156
Query: 116 DYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPS--RSDLLRAVLAADLVGFHTY 173
DY L+ +P L+E D + F+H P+PS++ R LP R+ +L +L A +GF
Sbjct: 157 DYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFAD 216
Query: 174 DYARHFVSACTRILG---FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHI 230
+ R+F+ + +L + VE +G TR+ P+G
Sbjct: 217 RWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGR-----NPQLP 271
Query: 231 KELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVP 290
+ ++E G ++++ R D IK + + AF L K +L P R VP
Sbjct: 272 EGIEEWADGHRLVVHSGRTDPIKNAERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVP 329
Query: 291 EYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMN 350
+V V N G+ +D D A + D+ + S DG N
Sbjct: 330 ANADYVHRVETAVAEANAELGS----DTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQN 385
Query: 351 LVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEERE 410
L ++E + + +ILSE GAA+ LG VNP+++ E A AI+ AL P +R
Sbjct: 386 LSTFEAPLVNE-RDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRA 444
Query: 411 KRHWHNFTHVTTHTAQEWAETFVSELNDTVVEAQLRIKQVPPS 453
+ T + W + + L ++ +
Sbjct: 445 EAAARRRDAARPWTLEAWVQAQLDGLAADHAARTATAERFDTA 487
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 7e-26
Identities = 27/216 (12%), Positives = 66/216 (30%), Gaps = 30/216 (13%)
Query: 470 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 529
L+ L ++ TL + P ++ L ++ L + +++G
Sbjct: 3 LIFLDYDGTLVPIIMNP----EESY-----ADAGLLSLISDL--KERFDTYIVTGRSPEE 51
Query: 530 LDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFE 589
+ + F ++ + +G + + + D + + P
Sbjct: 52 ISR-FLPLDINMICYHGACSKINGQIVYNNGSDRF-LGVFDRIYEDTRSWVSDFPGLRIY 109
Query: 590 QRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAA 649
++ +++++ + + + VE G +E+R GV KG+A
Sbjct: 110 RKNLAVLYHLGLMGAD----MKPKLRSRI-EEIARIFGVETYYGKMIIELRVPGVNKGSA 164
Query: 650 IDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYA 685
I + E + G DE +
Sbjct: 165 IRSVRGE-----------RPAIIAGDDAT-DEAAFE 188
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.9 bits (131), Expect = 9e-08
Identities = 82/622 (13%), Positives = 176/622 (28%), Gaps = 157/622 (25%)
Query: 95 NQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMK-VGWFLHTPFPSSEIHRTLP 153
+ M + Y+ D++ +F + + D K V + EI +
Sbjct: 5 HHMDFETGEHQYQYKDIL------SVFEDAFVDNF--DCKDVQDMPKSILSKEEIDHIIM 56
Query: 154 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRI-LGFEGTPEGVEDQGRLTRVAAF---- 208
S+ + + + + + FV RI F +P E + +
Sbjct: 57 SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR 116
Query: 209 -PIGIDSERFI-----RALEINPVQVHIKELQETFAGRKVML-GVDRLDMIKGIPQKLLA 261
+ D++ F R ++ + EL+ + V++ G + G + +A
Sbjct: 117 DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRP---AKNVLIDG-----V-LGSGKTWVA 167
Query: 262 FE-----KFLEENSD---W-------RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 306
+ K + W + VL + P + + I RI
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227
Query: 307 N---GRFGTLTAVPIHH-----LD--------RSLDFPALCALYAVTDVALVT----SLR 346
+ L + L + + C + L+T +
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS--CKI-------LLTTRFKQVT 278
Query: 347 DGMNLVSYEFVACQDLKKGVL------ILSEFAG-AAQSLGAGAILVNPWNITEVANAIA 399
D ++ + ++ + +L ++ Q L + NP
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP----------- 327
Query: 400 RALNMSPEE-REKR-HWHNFTHVTTHTAQEWAETFVSELNDTVVEA---QLRI----KQV 450
R L++ E R+ W N+ HV E+ ++ L +L + +
Sbjct: 328 RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI 387
Query: 451 PPSL----------READSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKL 500
P L + + L L+ T + P +ELK+
Sbjct: 388 PTILLSLIWFDVIKSDVMVVVNKLH--KYSLVEKQPKEST--ISIPS------IYLELKV 437
Query: 501 HPDLKQPLNA---------LCHDPKTTIVV-------------LSGSDR----NVLDKNF 534
+ + L+ D I L + + F
Sbjct: 438 KLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVF 497
Query: 535 QEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETS 594
++ +L + +R + W + LN + LK Y + P +E+ +
Sbjct: 498 LDFR-FLEQK----IRHDSTAWNASGSI-LNT--LQQLKFYKPYICDNDP--KYERLVNA 547
Query: 595 LVWNYKYADVEFGRIQARDMLQ 616
++ + + D+L+
Sbjct: 548 ILDFLPKIEENLICSKYTDLLR 569
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 5e-07
Identities = 50/335 (14%), Positives = 100/335 (29%), Gaps = 115/335 (34%)
Query: 6 EGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNG-------- 57
E +++ A W W VN LT + + + V L+ + ++
Sbjct: 335 ESIRDGLATWDNWKHVNC------DKLTTII--ESSLNV-LEPAEYRKMFDRLSVFPPSA 385
Query: 58 ------YCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDV 111
++W + + D ++ Y +V K K+
Sbjct: 386 HIPTILLS--LIW-----FDVIKSD----VMVVVNKLHKY--------SLVEKQPKES-T 425
Query: 112 VWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFH 171
+ +L K EY +HR++ ++ + + DL+ +
Sbjct: 426 ISIPSIYLELKVKLENEY-----------------ALHRSIVDHYNIPKTFDSDDLIPPY 468
Query: 172 TYDY-----ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFP-IGIDSERFIRALEINP 225
Y H + + R+ F + +D RF+
Sbjct: 469 LDQYFYSHIGHHLKNI---------------EHPE--RMTLFRMVFLDF-RFLEQ----- 505
Query: 226 VQVHIKELQETFAGRKVMLGVDRL-DMIK---------GIPQKLL-AFEKFL---EENSD 271
K ++ A ++ L + ++L+ A FL EEN
Sbjct: 506 -----KIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENL- 559
Query: 272 WRGKVV-LLQIAVPTRTDVPEYQRLTSQVHEIVGR 305
K LL+IA+ + E + + + H+ V R
Sbjct: 560 ICSKYTDLLRIAL-----MAEDEAIFEEAHKQVQR 589
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 1e-07
Identities = 48/281 (17%), Positives = 81/281 (28%), Gaps = 47/281 (16%)
Query: 82 RSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHT 141
+ + Y+ N+ + ++ D V HD L ++ Y W H
Sbjct: 102 KLTEEMKELYLNVNRENSKFIDLS--SFDYVLVHDPQPAAL---IEFYEKKSPWLWRCHI 156
Query: 142 PFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGR 201
S L R V D FH +Y + +
Sbjct: 157 DLSS----PNREFWEFLRRFVEKYDRYIFHLPEYVQPELDR------------------- 193
Query: 202 LTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQK 258
+ P ID + Q I + E F + ++ V R D KGI
Sbjct: 194 -NKAVIMPPSIDPLSE---KNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDV 249
Query: 259 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 318
+ + K E+ + L + D PE + +G + +
Sbjct: 250 IEIYRKVKEKIPGVQ-----LLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGV 304
Query: 319 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 359
H + + A +DV L S+R+G L E +
Sbjct: 305 HARE-------VNAFQRASDVILQMSIREGFGLTVTEAMWK 338
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 4e-06
Identities = 49/361 (13%), Positives = 104/361 (28%), Gaps = 53/361 (14%)
Query: 89 AAYIKANQMFADVVNKHYKDGDVV-----------WCHDYHLMFLPKCLKEYNSDMKVGW 137
K D++ +Y DG++V C H + K +SD+
Sbjct: 398 VELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---DSDIYWKK 454
Query: 138 FLHTPFPSSEIH--RTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEG 195
S + + +D + ++ G +A T +
Sbjct: 455 LDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGI 514
Query: 196 VEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF----------------AG 239
+ V G D + E E
Sbjct: 515 DVFDPKFNIV---SPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKK 571
Query: 240 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT--RTDVPEYQRLTS 297
+ ++ + RLD +K + + + K VV + + E +++
Sbjct: 572 KPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYD 631
Query: 298 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT-DVALVTSLRDGMNLVSYEF 356
+ E ++NG+F +++ +DR L T + +L + L E
Sbjct: 632 LIEEY--KLNGQFRWISS----QMDRV-RNGELYRYICDTKGAFVQPALYEAFGLTVVEA 684
Query: 357 VACQDLKKGV-LILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSPEEREKRH 413
+ C G+ + G A+ + G ++P++ + A+ +A E+
Sbjct: 685 MTC-----GLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWD 739
Query: 414 W 414
Sbjct: 740 E 740
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 48.2 bits (114), Expect = 6e-06
Identities = 22/264 (8%), Positives = 59/264 (22%), Gaps = 49/264 (18%)
Query: 172 TYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIK 231
TY Y ++ L + T F I++ +
Sbjct: 189 TYKYRGPQIAVFNSELLKQYFNNKG---YNFTDEYFFQPKINTTLKNYINDKRQ------ 239
Query: 232 ELQETFAGRKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVP 290
K++L R + + A + F+++ ++
Sbjct: 240 -------KEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKII------------ 280
Query: 291 EYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMN 350
VG + + ++ L L L + + + + +
Sbjct: 281 -----------SVGEKHKDIALGKGIHLNSL-GKLTLEDYADLLKRSSIGISLMISPHPS 328
Query: 351 LVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEE 408
E G+ +++ + + + N +A +
Sbjct: 329 YPPLEMAHF-----GLRVITNKYENKDLSNWHSNIVSLEQLNPENIAETLVELCMS-FNN 382
Query: 409 REKRHWHNFTHVTTHTAQEWAETF 432
R+ + +
Sbjct: 383 RDVDKKESSNMMFYINEFNEFSFI 406
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 4e-05
Identities = 42/213 (19%), Positives = 71/213 (33%), Gaps = 29/213 (13%)
Query: 204 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFE 263
R++ G D E + + + + KV+ V RL KG + A
Sbjct: 209 RISVVSPGADVELYSPGNDRATERS--RRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVA 266
Query: 264 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHE--IVGRINGRFGTLTAVPIHHL 321
+ + D +V+ I E + RI RF +
Sbjct: 267 ALFDRDPDRNLRVI---ICGGPSGPNATPDTYRHMAEELGVEKRI--RF-------LDPR 314
Query: 322 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV-LILSEFAGAAQSLG 380
L A+Y D+ V S + LV+ E A G +I + G ++
Sbjct: 315 PP----SELVAVYRAADIVAVPSFNESFGLVAMEAQAS-----GTPVIAARVGGLPIAVA 365
Query: 381 AG--AILVNPWNITEVANAIARALNMSPEEREK 411
G +LV+ + A+A+A L+ E R +
Sbjct: 366 EGETGLLVDGHSPHAWADALATLLD-DDETRIR 397
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 40/312 (12%), Positives = 87/312 (27%), Gaps = 63/312 (20%)
Query: 135 VGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTR----ILGFE 190
+ + E L + R A + F + + +
Sbjct: 98 AADVCYAEKVAQE-KGFLYRLTSRYRHYAAFERATFEQGK-STKLMMLTDKQIADFQKHY 155
Query: 191 GTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLD 250
T R P GI +R N +++ ++ + ++L V
Sbjct: 156 QTEPE--------RFQILPPGIYPDRKYSEQIPNSREIYRQKNG-IKEQQNLLLQVGSDF 206
Query: 251 MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHE--IVGRING 308
KG+ + + A E LL + + ++ + + + +
Sbjct: 207 GRKGVDRSIEALASLPESLRHNT----LLFVV-----GQDKPRKFEALAEKLGVRSNV-- 255
Query: 309 RF-GTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV- 366
F V L A D+ L + ++ +V E + G+
Sbjct: 256 HFFSGRNDVS--------------ELMAAADLLLHPAYQEAAGIVLLEAITA-----GLP 296
Query: 367 LILSEFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREK-----RHWHNFT 418
++ + G A + G ++ P++ ++ + +AL R RH
Sbjct: 297 VLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALT-QSPLRMAWAENARH----- 350
Query: 419 HVTTHTAQEWAE 430
+ T E
Sbjct: 351 YADTQDLYSLPE 362
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 1e-04
Identities = 58/379 (15%), Positives = 112/379 (29%), Gaps = 58/379 (15%)
Query: 71 GLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDG-----------DVVWCHDYHL 119
LP+E+ + ++ + + F VV HY DG + + H
Sbjct: 93 FLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHS 152
Query: 120 MFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHF 179
+ K K + I + AD + T
Sbjct: 153 LGAQKMEKLNVNTSNFKEMDERFKFHRRII-------AERLTMSYADKIIVSTSQERFGQ 205
Query: 180 VSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAG 239
S + + + P G+++ F K L+
Sbjct: 206 YSHDLYRGAVNVEDDD--------KFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGS 257
Query: 240 ----RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDV---PEY 292
++ RLD K + A+ + E + L I P E
Sbjct: 258 ERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEE 317
Query: 293 QRLTSQVHEIVGR--INGRFGTLTAVPIHHLDRSLDFPALCALYAVT-DVALVTSLRDGM 349
+ + ++ E++ G+ ++ + + L A A V +TS +
Sbjct: 318 KEILGKIIELIDNNDCRGKV----SMFPLNSQQEL--AGCYAYLASKGSVFALTSFYEPF 371
Query: 350 NLVSYEFVACQDLKKGV-LILSEFAGAAQSLGAG--AILVNPWNITEVANAIARALNMSP 406
L E +A G+ +++ G A+ L G +LV+P + ++A + +A S
Sbjct: 372 GLAPVEAMAS-----GLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE-SE 425
Query: 407 EERE-------KRHWHNFT 418
E +R +T
Sbjct: 426 ETWSAYQEKGKQRVEERYT 444
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 7e-04
Identities = 20/173 (11%), Positives = 48/173 (27%), Gaps = 33/173 (19%)
Query: 242 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHE 301
+ V R K + A + D L + P+ +++ +
Sbjct: 4 KIAMVGRYSNEKNQSVLIKAVAL-SKYKQDIV-----LLLKG----KGPDEKKIKLLAQK 53
Query: 302 --IVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 359
+ F ++ L + + + + + + E ++
Sbjct: 54 LGVKAEF--GF--------------VNSNELLEILKTCTLYVHAANVESEAIACLEAISV 97
Query: 360 QDLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREK 411
+I + A + L P N +++ I L + ERE+
Sbjct: 98 ---GIVPVIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWWLE-NKLERER 146
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 8e-04
Identities = 52/315 (16%), Positives = 94/315 (29%), Gaps = 65/315 (20%)
Query: 110 DVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTL--PSRSDLLRAVLAADL 167
D VW + L + KV H E+ ++ SR L + D+
Sbjct: 88 DNVWFGAAAPLALMAGTAKQAGASKVIASTHG----HEVGWSMLPGSRQSLRKIGTEVDV 143
Query: 168 VGFHTY--DYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINP 225
+ TY Y G P G+D +RF A +
Sbjct: 144 L---TYISQYTLRRF---KSAFGSH------------PTFEHLPSGVDVKRFTPATPEDK 185
Query: 226 VQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT 285
K+L T V+ RL KG + A + + D + LL +
Sbjct: 186 SATR-KKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQ----LLIVG--- 236
Query: 286 RTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 345
L ++ + L++ + A D+ + +
Sbjct: 237 --SGRYESTLRRLATDVSQNV-------------KFLGRLEYQDMINTLAAADIFAMPAR 281
Query: 346 RD-------GMNLVSYEFVACQDLKKGV-LILSEFAGAAQSLGAGA-ILVNPWNITEVAN 396
G+ +V E AC GV +I GA +++ ++V ++ +++
Sbjct: 282 TRGGGLDVEGLGIVYLEAQAC-----GVPVIAGTSGGAPETVTPATGLVVEGSDVDKLSE 336
Query: 397 AIARALNMSPEEREK 411
+ L+ P R
Sbjct: 337 LLIELLD-DPIRRAA 350
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 814 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-122 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 2e-08 | |
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 2e-05 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 0.001 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 373 bits (959), Expect = e-122
Identities = 145/435 (33%), Positives = 222/435 (51%), Gaps = 13/435 (2%)
Query: 8 VKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLF 67
+K W GW+G ++ Q L E + +YYN + N +LWP F
Sbjct: 31 LKAAGGLWFGWSGETGNED--QPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAF 88
Query: 68 HYLGLPQEDRLATTRSFQSQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLK 127
HY RL + + + Y++ N + AD + +D D++W HDYHL+ L+
Sbjct: 89 HY-------RLDLVQFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELR 141
Query: 128 EYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 187
+ + ++G+FLH PFP+ EI LP+ LL + DL+GF T + F+ + +
Sbjct: 142 KRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLT 201
Query: 188 GFEGTPEGVED-QGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGV 246
G+ R +PIGI+ + + P+ + +L+ + + V
Sbjct: 202 RVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAA-GPLPPKLAQLKAELKNVQNIFSV 260
Query: 247 DRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRI 306
+RLD KG+P++ LA+E LE+ GK+ QIA +R DV YQ + Q+ GRI
Sbjct: 261 ERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRI 320
Query: 307 NGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ-DLKKG 365
NG++G L P+++L++ D L ++ +DV LVT LRDGMNLV+ E+VA Q G
Sbjct: 321 NGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPG 380
Query: 366 VLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTA 425
VL+LS+FAGAA L A++VNP++ EVA A+ RAL MS ER RH + +
Sbjct: 381 VLVLSQFAGAANELT-SALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDI 439
Query: 426 QEWAETFVSELNDTV 440
W E F+S+L V
Sbjct: 440 NHWQECFISDLKQIV 454
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 55.2 bits (131), Expect = 2e-08
Identities = 67/395 (16%), Positives = 135/395 (34%), Gaps = 27/395 (6%)
Query: 42 IPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYIKANQMFADV 101
I VF +E V Y N ++ + L ++ + + +A+ + +
Sbjct: 54 IRVFGEEVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLND 113
Query: 102 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 161
+ + DVV HD+H +F +K+Y + + +H S + + L
Sbjct: 114 LLREEPLPDVVHFHDWHTVFAGALIKKYF-KIPAVFTIHRLNKSK-LPAFYFHEAGLSEL 171
Query: 162 VLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 221
D+ HT Y V+ +R + +G++T V GID + +
Sbjct: 172 APYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYV---FNGIDCSFWNESY 228
Query: 222 EINPVQVHIKELQETFA--GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLL 279
K L F + + R D + LL + L +++
Sbjct: 229 LTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRF-- 286
Query: 280 QIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 339
+ PE + + E G + L+ + L S+DF + + + +
Sbjct: 287 ---IIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGL 343
Query: 340 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIA 399
+ ++ G ++ +D+ ILV + E+ANAI
Sbjct: 344 VALEAMCLGAIPIASAVGGLRDIITNE---------------TGILVKAGDPGELANAIL 388
Query: 400 RALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVS 434
+AL +S + K + + + ++ AE +V
Sbjct: 389 KALELSRSDLSKFRENCKKRAMSFSWEKSAERYVK 423
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 45.8 bits (107), Expect = 2e-05
Identities = 49/356 (13%), Positives = 93/356 (26%), Gaps = 47/356 (13%)
Query: 87 QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFPS 145
+FAA A V ++ D+V HD+ P ++ ++ +H
Sbjct: 110 RFAALSLAAARIGAGVLPGWRP-DMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQ 168
Query: 146 SEIHRTLPSRSDLLRAVLAAD----------LVGFHTYDYARHFVSACTR---ILGFEGT 192
+ + S+ L + L G A VS + G
Sbjct: 169 GQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGM 228
Query: 193 PEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRK----------- 241
R + GID++ + A + + + A K
Sbjct: 229 GLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDD 288
Query: 242 ----VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTS 297
+ + RL KGI A ++ + V +
Sbjct: 289 DGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRL----------VVLGAGDVALEGALL 338
Query: 298 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFV 357
G H + D + + + + + +LR G V
Sbjct: 339 AAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTG 398
Query: 358 ACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNM--SPEEREK 411
D ++ A S A + +P + + AI R + P+ +
Sbjct: 399 GLADT-----VIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQ 449
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 38.6 bits (88), Expect = 0.001
Identities = 36/204 (17%), Positives = 68/204 (33%), Gaps = 24/204 (11%)
Query: 211 GIDSERFIRALEINPVQVHIKELQETFA--GRKVMLGVDRLDMI-KGIPQKLLAFEKFLE 267
GID + + K L F + + R D KG+ L A E
Sbjct: 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSS 60
Query: 268 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDF 327
+ + +++ PE + + E G + L+ + L S+DF
Sbjct: 61 KKEFQEMRFIIIGK------GDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF 114
Query: 328 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVN 387
+ + + + + ++ G ++ +D+ ILV
Sbjct: 115 VIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETG---------------ILVK 159
Query: 388 PWNITEVANAIARALNMSPEEREK 411
+ E+ANAI +AL +S + K
Sbjct: 160 AGDPGELANAILKALELSRSDLSK 183
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 814 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.95 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.95 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.94 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.93 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.93 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.92 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.91 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.91 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.91 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.89 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.88 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.86 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.86 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.85 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.82 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.8 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.89 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 98.29 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.1 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.03 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 97.99 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.96 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 97.95 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 97.6 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.36 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.31 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 96.96 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 96.82 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.8 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 96.58 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.53 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 96.33 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 96.23 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 95.75 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 95.55 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 95.48 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.26 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 95.14 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 95.07 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 95.0 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 94.44 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 94.16 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 93.96 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 93.58 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 93.49 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 93.37 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 93.18 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 92.75 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 92.21 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 92.12 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 91.74 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 91.38 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 90.94 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 86.07 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 85.55 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 84.95 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 84.59 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 81.92 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=704.57 Aligned_cols=425 Identities=34% Similarity=0.609 Sum_probs=387.8
Q ss_pred CCCCC-CCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 23797-67992999728999999021689998631961998534947787675422100133336789998431000022
Q 003508 4 LFEGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTR 82 (814)
Q Consensus 4 ~~~~~-~~~~~~wvg~~g~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~~f~~~~lwp~~H~~~~~~~~~~~~~~ 82 (814)
+|.++ ++.+++||||+|..+++++ ........+++|.||+|+++++++||+||||++|||+|||+....
T Consensus 26 al~~~~~~~~g~Wvgw~g~~~~~~~--~~~~~~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWpl~H~~~~~~-------- 95 (456)
T d1uqta_ 26 GILGALKAAGGLWFGWSGETGNEDQ--PLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-------- 95 (456)
T ss_dssp HHHHHHHHHCEEEEEEEEEESCCSS--CCEEEEETTEEEEEEEECHHHHHHHTTTHHHHTHHHHHTTCGGGC--------
T ss_pred HHHHHHHHCCCEEEECCCCCCCCCC--HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCC--------
T ss_conf 7299995179789966998876642--345554058516995699999999998715442621015766654--------
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHCCCCCCHHHHHH
Q ss_conf 1289-899999999999999987489998999919650159999996189981997981589954445049885799999
Q 003508 83 SFQS-QFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRA 161 (814)
Q Consensus 83 ~~~~-~w~~Y~~vN~~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~fr~lp~~~~il~~ 161 (814)
.|+. .|++|.+||+.||+++.+.++++|+|||||||++++|.++|++.++++|+||+|+|||++++|+++|++++++++
T Consensus 96 ~~~~~~~~~Y~~vN~~fA~~l~~~~~~~d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ 175 (456)
T d1uqta_ 96 QFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQ 175 (456)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCCCCHHHHHHH
T ss_conf 40378888899999999999987256898699954525556999998589985899968999985775548506999977
Q ss_pred HHHCCEEEEECHHHHHHHHHHHHHHHCCCCC-CCCEEECCEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHCCC
Q ss_conf 7624477571388899999999988375358-992352893789999613569256656613991499999999992898
Q 003508 162 VLAADLVGFHTYDYARHFVSACTRILGFEGT-PEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGR 240 (814)
Q Consensus 162 ll~aD~I~f~~~~~~~~Fl~~~~~~l~~~~~-~~~i~~~g~~~~v~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~ 240 (814)
|+++|+|+||+++|++||+.+|.++++.+.. ...+.+.|+.+++.++|+|||++.|.+....+. .+....++..++++
T Consensus 176 ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~-~~~~~~l~~~~~~~ 254 (456)
T d1uqta_ 176 LCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPL-PPKLAQLKAELKNV 254 (456)
T ss_dssp HTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCC-CHHHHHHHHHTTTC
T ss_pred HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEECCCCCCHHHHHHCCCHH-HHHHHHHHHHCCCC
T ss_conf 63226200358999999999999973861126872995681553012067656266543114077-99999977752898
Q ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf 19999305444689789999999989868466586679999639999937899999999999998503459888433899
Q 003508 241 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 320 (814)
Q Consensus 241 ~iIl~VgRl~~~KGi~~~l~A~~~ll~~~P~~~~~v~Lv~i~~p~~~~~~~y~~l~~~l~~lv~~iN~~~g~~~~~~v~~ 320 (814)
++|++|||+++.||+..+|+||++|++++|+++++++|+|++.|++++.++|.++..++.+++++||++|+..+|.|+++
T Consensus 255 ~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~ 334 (456)
T d1uqta_ 255 QNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYY 334 (456)
T ss_dssp EEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEE
T ss_pred EEEEEECCCCHHHCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 59999378743206589999999998758431461899997487534568899999999999999876521279875021
Q ss_pred ECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCC-CCCCEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHH
Q ss_conf 46889988999999866689987897668814887766036-99843999188781000389639989999999999999
Q 003508 321 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIA 399 (814)
Q Consensus 321 ~~~~i~~~el~aly~~ADv~v~tS~~EG~~Lv~lEama~~~-~~~g~lVlS~~~G~~~~lg~~~~lvnP~d~~~lA~ai~ 399 (814)
+.+.++++++.++|+.|||+++||++||||||++|||||+. .++|++|+|+++|+++++ .+|++|||+|++++|++|.
T Consensus 335 ~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l-~~g~lVnP~d~~~~A~ai~ 413 (456)
T d1uqta_ 335 LNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL-TSALIVNPYDRDEVAAALD 413 (456)
T ss_dssp ECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC-TTSEEECTTCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHH-CCEEEECCCCHHHHHHHHH
T ss_conf 158767888767775305452587657888399999990898889758972897877885-9769989599999999999
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 99449999999999988579987399999999999999848
Q 003508 400 RALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTV 440 (814)
Q Consensus 400 ~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 440 (814)
++|+||++||++|+++++++|.+||++.|+++||.+|+++.
T Consensus 414 ~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 454 (456)
T d1uqta_ 414 RALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 454 (456)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSC
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
T ss_conf 99749999999999999899997899999999999987551
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=6.7e-36 Score=238.27 Aligned_cols=223 Identities=16% Similarity=0.202 Sum_probs=179.8
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCEEECCCCEE
Q ss_conf 19999268765899889998885011210298966999999853199945999928996789984110393698018579
Q 003508 469 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMF 548 (814)
Q Consensus 469 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~~l~liaehG~~ 548 (814)
.|||||+||||+++..+| +...++++++++|++|++ ++.|+|+|||+...++..+.. ..+++++||+.
T Consensus 1 ~Li~~DlDGTL~~~~~~~---------~~~~i~~~~~~~l~~l~~--~~~v~i~TGR~~~~l~~~~~~-~~~~~~~ng~~ 68 (229)
T d1u02a_ 1 SLIFLDYDGTLVPIIMNP---------EESYADAGLLSLISDLKE--RFDTYIVTGRSPEEISRFLPL-DINMICYHGAC 68 (229)
T ss_dssp CEEEEECBTTTBCCCSCG---------GGCCCCHHHHHHHHHHHH--HSEEEEECSSCHHHHHHHSCS-SCEEEEGGGTE
T ss_pred CEEEEEECCCCCCCCCCH---------HHCCCCHHHHHHHHHHHH--CCCEEEECCCCHHHHHHHCCC-CCCEEECCEEE
T ss_conf 989999557778997896---------548899999999999850--997899969987996643476-66289647089
Q ss_pred EEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf 98289820012655479578988999999976059981332026338997025771333777999999981299899964
Q 003508 549 LRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASV 628 (814)
Q Consensus 549 i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~iE~K~~~i~~hyr~ad~e~~~~~a~el~~~l~~~~~~~~~~ 628 (814)
+..++..+.... ......|.+.+...+..+....+|...+.+.....+++..............+...+ ....+
T Consensus 69 ~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~ 142 (229)
T d1u02a_ 69 SKINGQIVYNNG-SDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIA-----RIFGV 142 (229)
T ss_dssp EEETTEEEECTT-GGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHH-----HHHTC
T ss_pred EECCCCEEEECC-HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHH-----HCCCE
T ss_conf 834993466233-054499999999986776506677210355421342203332445799999999985-----23876
Q ss_pred EEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99994919999978999999999999983415658999755999817999959999763678999999999889888767
Q 003508 629 EVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEPELPDDGPGIPRTRPTDAIK 708 (814)
Q Consensus 629 ~v~~g~~~vEI~p~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~~~~~~~~~~~~~~~~~~~~~ 708 (814)
.+..|..++||.|+|+|||.|+++|+++ ++++|||| +.||++||++++.
T Consensus 143 ~~~~~~~~idi~p~g~~Kg~al~~l~~~-----------~~~i~~GD-s~ND~~Mf~~~~~------------------- 191 (229)
T d1u02a_ 143 ETYYGKMIIELRVPGVNKGSAIRSVRGE-----------RPAIIAGD-DATDEAAFEANDD------------------- 191 (229)
T ss_dssp EEEECSSEEEEECTTCCHHHHHHHHHTT-----------SCEEEEES-SHHHHHHHHTTTT-------------------
T ss_pred EEEEECEEEEEECCCCCHHHHHHHHHCC-----------CCCEEECC-CCCHHHHHHCCCC-------------------
T ss_conf 9996021899736989889999997440-----------44566438-8870999960288-------------------
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 85101113333026886555587778889888888998888877899886643313589872599996798763343238
Q 003508 709 VPGERRQALKVASRGSSKISQGKTQRPAQAPEKKTPNHNCTNVRQPSSDKTSYNVLDLNKENYFSCAVGRPRTNARFLLQ 788 (814)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~VG~~~t~A~~~l~ 788 (814)
+|+|+||.++|+|+|+++
T Consensus 192 --------------------------------------------------------------~~av~~g~~~~~A~~~~~ 209 (229)
T d1u02a_ 192 --------------------------------------------------------------ALTIKVGEGETHAKFHVA 209 (229)
T ss_dssp --------------------------------------------------------------SEEEEESSSCCCCSEEES
T ss_pred --------------------------------------------------------------EEEEEECCCCCCCEEECC
T ss_conf --------------------------------------------------------------289996898766728759
Q ss_pred CHHHHHHHHHHHHH
Q ss_conf 95799999999651
Q 003508 789 SSDEVVSFLKKLAD 802 (814)
Q Consensus 789 ~~~~v~~~L~~l~~ 802 (814)
+++||..+|+.|..
T Consensus 210 ~~~ev~~~l~~l~~ 223 (229)
T d1u02a_ 210 DYIEMRKILKFIEM 223 (229)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
T ss_conf 99999999999999
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=5.3e-32 Score=214.03 Aligned_cols=318 Identities=17% Similarity=0.215 Sum_probs=214.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCC--CCCEEEEECCCCHHHHHHHHH-HCCCCEEEEEEECCCC----CHHHHCCCC--C
Q ss_conf 289899999999999999987489--998999919650159999996-1899819979815899----544450498--8
Q 003508 84 FQSQFAAYIKANQMFADVVNKHYK--DGDVVWCHDYHLMFLPKCLKE-YNSDMKVGWFLHTPFP----SSEIHRTLP--S 154 (814)
Q Consensus 84 ~~~~w~~Y~~vN~~fa~~i~~~~~--~~DiI~ihdyhl~llp~~lr~-~~~~~~i~~f~H~Pfp----~~e~fr~lp--~ 154 (814)
+...|..|...++..++.+..... ..||||+|++|..+.+.+++. ..+.+++.+++|.... +...+..+. +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~ 183 (477)
T d1rzua_ 104 YPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPA 183 (477)
T ss_dssp CTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCG
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCH
T ss_conf 65218899999988776653025688888799336067788999998547898889998324423467888998862114
Q ss_pred -------------CHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEEEEECCCCHHHHHHHH
Q ss_conf -------------5799999762447757138889999999998837535899235289378999961356925665661
Q 003508 155 -------------RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRAL 221 (814)
Q Consensus 155 -------------~~~il~~ll~aD~I~f~~~~~~~~Fl~~~~~~l~~~~~~~~i~~~g~~~~v~v~p~GId~~~f~~~~ 221 (814)
......++..+|.+...+..+++..+.. ..+... ..+ ...+..++.++|+|+|.+.|.|..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~---~~~~~~--~~~-~~~~~~~~~vi~ngv~~~~~~p~~ 257 (477)
T d1rzua_ 184 HAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTA---EFGMGL--EGV-IGSRAHVLHGIVNGIDADVWNPAT 257 (477)
T ss_dssp GGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSH---HHHTTC--HHH-HHTTGGGEEECCCCBCTTTSCTTT
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH---HCCCCH--HHH-HHHCCCCEEEEECCCCHHHCCCCC
T ss_conf 44065443432056899988776444213119999999987---547536--656-665156479997893401205664
Q ss_pred CC-----------CCHHHHHHHHHHHH----CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC
Q ss_conf 39-----------91499999999992----8981999930544468978999999998986846658667999963999
Q 003508 222 EI-----------NPVQVHIKELQETF----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTR 286 (814)
Q Consensus 222 ~~-----------~~~~~~~~~lr~~~----~~~~iIl~VgRl~~~KGi~~~l~A~~~ll~~~P~~~~~v~Lv~i~~p~~ 286 (814)
.. .........++..+ .+.++|+++||+++.||++.+++|++.++++++ .|+.+|.+
T Consensus 258 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~------~l~~~G~G-- 329 (477)
T d1rzua_ 258 DHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGG------RLVVLGAG-- 329 (477)
T ss_dssp CTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTC------EEEEEECB--
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCC------EEEEEECC--
T ss_conf 5333333104567776663899887414466786389998500215883799999998786598------39999367--
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCE
Q ss_conf 99378999999999999985034598884338994688998899999986668998789766881488776603699843
Q 003508 287 TDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGV 366 (814)
Q Consensus 287 ~~~~~y~~l~~~l~~lv~~iN~~~g~~~~~~v~~~~~~i~~~el~aly~~ADv~v~tS~~EG~~Lv~lEama~~~~~~g~ 366 (814)
+.. ...++.++..+++. .+. +.+..+.+++..+|+.||+||+||.+||||+|++|||||| .|
T Consensus 330 -~~~----~~~~~~~~~~~~~~--------~v~-~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G----~P 391 (477)
T d1rzua_ 330 -DVA----LEGALLAAASRHHG--------RVG-VAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG----CI 391 (477)
T ss_dssp -CHH----HHHHHHHHHHHTTT--------TEE-EEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CE
T ss_pred -CCH----HHHHHHHHHHHCCC--------EEE-EECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC----CC
T ss_conf -745----77899998763587--------278-9715470579999983851348865357888999999839----98
Q ss_pred EEEECCCCCCCCC--C---------CCEEEECCCCHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 9991887810003--8---------963998999999999999999449--99999999998857998739999999999
Q 003508 367 LILSEFAGAAQSL--G---------AGAILVNPWNITEVANAIARALNM--SPEEREKRHWHNFTHVTTHTAQEWAETFV 433 (814)
Q Consensus 367 lVlS~~~G~~~~l--g---------~~~~lvnP~d~~~lA~ai~~~L~~--~~~er~~r~~~~~~~v~~~~~~~W~~~fl 433 (814)
+|+|+.+|..|.+ | .+|++|+|.|++++|++|.++|.. .++.+.++.+++. .+.|+|+.-+++++
T Consensus 392 vVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a~--~~~fsw~~~a~~~~ 469 (477)
T d1rzua_ 392 PVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGM--KSDVSWEKSAGLYA 469 (477)
T ss_dssp EEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHH--TCCCBHHHHHHHHH
T ss_pred EEECCCCCCCCEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH--HHHCCHHHHHHHHH
T ss_conf 9990799974055248755334678744896999999999999999860079999999999999--85189999999999
Q ss_pred HH
Q ss_conf 99
Q 003508 434 SE 435 (814)
Q Consensus 434 ~~ 435 (814)
..
T Consensus 470 ~l 471 (477)
T d1rzua_ 470 AL 471 (477)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=3e-30 Score=203.17 Aligned_cols=305 Identities=19% Similarity=0.204 Sum_probs=215.4
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCH---HHHCC------CCC--CHHHHHHHHHC
Q ss_conf 99999987489998999919650159999996189981997981589954---44504------988--57999997624
Q 003508 97 MFADVVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHRT------LPS--RSDLLRAVLAA 165 (814)
Q Consensus 97 ~fa~~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~---e~fr~------lp~--~~~il~~ll~a 165 (814)
...+.+.+....+|+||+|+++..+++.++++. .+.++.++.|..++.. ..+.. ... ..........+
T Consensus 109 ~~~~~~~~~~~~pDiIh~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (437)
T d2bisa1 109 LLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIA 187 (437)
T ss_dssp HHHHHHTTSSCCCSEEEEETGGGHHHHHHHHHH-HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHS
T ss_pred HHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCC-CCCCEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 989999840899978998970466676543013-4676258996214455512332101201345677889998888765
Q ss_pred CEEEEECHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHH--CCCEEE
Q ss_conf 477571388899999999988375358992352893789999613569256656613991499999999992--898199
Q 003508 166 DLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVM 243 (814)
Q Consensus 166 D~I~f~~~~~~~~Fl~~~~~~l~~~~~~~~i~~~g~~~~v~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iI 243 (814)
|.+...+......... .+.. ...++.++|+|+|++.|.+....+........++.++ .++++|
T Consensus 188 d~v~~~~~~~~~~~~~----~~~~-----------~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 252 (437)
T d2bisa1 188 DIVTTVSRGYLIDEWG----FFRN-----------FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTF 252 (437)
T ss_dssp SEEEESCHHHHHHTHH----HHGG-----------GTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEE
T ss_pred HHHCCCCHHHHHHHHH----HHCC-----------CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 2211110245666666----5134-----------567518970465443433222201058888765455402678669
Q ss_pred EEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC
Q ss_conf 99305444-68978999999998986846658667999963999993789999999999999850345988843389946
Q 003508 244 LGVDRLDM-IKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLD 322 (814)
Q Consensus 244 l~VgRl~~-~KGi~~~l~A~~~ll~~~P~~~~~v~Lv~i~~p~~~~~~~y~~l~~~l~~lv~~iN~~~g~~~~~~v~~~~ 322 (814)
+++||+.. .||+..+++|+..+..+... .++.|+++|.. .+.+ ...++.+.... + .+.++.
T Consensus 253 ~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~--~~~~lvi~G~~----~~~~---~~~~~~~~~~~----~-----~~~~~~ 314 (437)
T d2bisa1 253 MFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKG----DPEL---EGWARSLEEKH----G-----NVKVIT 314 (437)
T ss_dssp EEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCB----CHHH---HHHHHHHHHTC----T-----TEEEEC
T ss_pred EEEECCCCCCHHHHHHHHHHCCCCCCCCC--CCCEEEEECCC----CCCC---CCCHHHHCCCC----C-----CCEECC
T ss_conf 87303566512589998641023323333--32114531022----3333---21002210232----1-----000023
Q ss_pred CCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCC-CCCEEEECCCCHHHHHHHHHHH
Q ss_conf 889988999999866689987897668814887766036998439991887810003-8963998999999999999999
Q 003508 323 RSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARA 401 (814)
Q Consensus 323 ~~i~~~el~aly~~ADv~v~tS~~EG~~Lv~lEama~~~~~~g~lVlS~~~G~~~~l-g~~~~lvnP~d~~~lA~ai~~~ 401 (814)
+.++.+++..+|+.||++++||..||++++++|||+|| .|+|+|+.+|..+.+ +.+|++|+|.|++++|++|.++
T Consensus 315 ~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G----~Pvi~~~~g~~~e~i~~~~G~~~~~~d~~~la~~i~~l 390 (437)
T d2bisa1 315 EMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIPIASAVGGLRDIITNETGILVKAGDPGELANAILKA 390 (437)
T ss_dssp SCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTT----CEEEEESCTTHHHHCCTTTCEEECTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCC----CCEEEECCCCCHHHEECCCEEEECCCCHHHHHHHHHHH
T ss_conf 45768889998764223544465556426899999879----98999389980773778958997799999999999999
Q ss_pred HCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 44999999999998857998739999999999999984
Q 003508 402 LNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 439 (814)
Q Consensus 402 L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 439 (814)
|.+.++.+.++.+++++.++.|+++.++++++..-.++
T Consensus 391 l~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~ 428 (437)
T d2bisa1 391 LELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGS 428 (437)
T ss_dssp HTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTC
T ss_pred HHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 83799999999999999999699999999999999999
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.95 E-value=1.4e-25 Score=174.17 Aligned_cols=192 Identities=20% Similarity=0.223 Sum_probs=151.7
Q ss_pred CCCHHHHHHHHCCCCHHHHHHHHHHHH--CCCEEEEEECCCC-CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf 569256656613991499999999992--8981999930544-4689789999999989868466586679999639999
Q 003508 211 GIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLD-MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 287 (814)
Q Consensus 211 GId~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~VgRl~-~~KGi~~~l~A~~~ll~~~P~~~~~v~Lv~i~~p~~~ 287 (814)
|||++.|.+........+....+++++ .++++|++|||+. +.||++.+++|++.+.++.+.. ++.|+++|..
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~--~~~l~i~G~g--- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQ--EMRFIIIGKG--- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGG--GEEEEEECCB---
T ss_pred CCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCC--CEEEEEEEEC---
T ss_conf 91813308988870168999999999597999889997688811049999999988641125788--8189999613---
Q ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEE
Q ss_conf 93789999999999999850345988843389946889988999999866689987897668814887766036998439
Q 003508 288 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVL 367 (814)
Q Consensus 288 ~~~~y~~l~~~l~~lv~~iN~~~g~~~~~~v~~~~~~i~~~el~aly~~ADv~v~tS~~EG~~Lv~lEama~~~~~~g~l 367 (814)
.+.++. .++.+...+ ..++++.+.++.+++..+|+.||++|+||.+||++++.+|||+|+ .|+
T Consensus 76 -~~~~~~---~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G----~pv 138 (196)
T d2bfwa1 76 -DPELEG---WARSLEEKH---------GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIP 138 (196)
T ss_dssp -CHHHHH---HHHHHHHHC---------TTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT----CEE
T ss_pred -CCCHHH---HHHHHHHCC---------CEEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHCC----CEE
T ss_conf -552134---543322113---------115775302332110000123233443222112332201333148----604
Q ss_pred EEECCCCCCCCC-CCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 991887810003-896399899999999999999944999999999998857998739
Q 003508 368 ILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 424 (814)
Q Consensus 368 VlS~~~G~~~~l-g~~~~lvnP~d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~ 424 (814)
|+|..++..+.+ +.+|++++|.|+++++++|.++|.+..+.+.++...+++++++|+
T Consensus 139 I~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 139 IASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp EEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred EECCCCCCCEEECCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf 6517885320102873146789999999999999995799999999999999998378
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=3e-26 Score=178.29 Aligned_cols=228 Identities=14% Similarity=0.148 Sum_probs=165.3
Q ss_pred HCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCEEECCEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHH---CCC
Q ss_conf 24477571388899999999988375358992352893789999613569256656613991499999999992---898
Q 003508 164 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 240 (814)
Q Consensus 164 ~aD~I~f~~~~~~~~Fl~~~~~~l~~~~~~~~i~~~g~~~~v~v~p~GId~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 240 (814)
.++.+...+....+.+.. ..+. ...++.++|+|||++.+.+... +. ....+|..+ .++
T Consensus 135 ~~~~~~~~~~~~~~~~~~----~~~~-----------~~~~i~vi~~gv~~~~~~~~~~-~~---~~~~~r~~~~~~~~~ 195 (370)
T d2iw1a1 135 KSTKLMMLTDKQIADFQK----HYQT-----------EPERFQILPPGIYPDRKYSEQI-PN---SREIYRQKNGIKEQQ 195 (370)
T ss_dssp CCCEEEESCHHHHHHHHH----HHCC-----------CGGGEEECCCCCCGGGSGGGSC-TT---HHHHHHHHTTCCTTC
T ss_pred CCCEEEEECHHHHHHHHH----HCCC-----------CCCEEEEEEEECCCCCCCCCCC-HH---HHHHHHHCCCCCCCC
T ss_conf 574699824799999998----6099-----------9642899974022221124676-56---666654304888663
Q ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf 19999305444689789999999989868466586679999639999937899999999999998503459888433899
Q 003508 241 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 320 (814)
Q Consensus 241 ~iIl~VgRl~~~KGi~~~l~A~~~ll~~~P~~~~~v~Lv~i~~p~~~~~~~y~~l~~~l~~lv~~iN~~~g~~~~~~v~~ 320 (814)
++|+++||+.+.||++.+++|++.+.+++|+.. ++.+++.. .+ +++++++.+++.. ..++
T Consensus 196 ~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~----~~ii~g~~---~~------~~~~~~~~~~~~~------~~v~- 255 (370)
T d2iw1a1 196 NLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLFVVGQD---KP------RKFEALAEKLGVR------SNVH- 255 (370)
T ss_dssp EEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEEEESSS---CC------HHHHHHHHHHTCG------GGEE-
T ss_pred EEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCE----EEECCCCC---CC------CCCCCCCCCCCCC------CCCC-
T ss_conf 699998514554203332011123323322100----00011222---22------2322222222222------2222-
Q ss_pred ECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCC--CCCEE-EECCCCHHHHHHH
Q ss_conf 46889988999999866689987897668814887766036998439991887810003--89639-9899999999999
Q 003508 321 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAI-LVNPWNITEVANA 397 (814)
Q Consensus 321 ~~~~i~~~el~aly~~ADv~v~tS~~EG~~Lv~lEama~~~~~~g~lVlS~~~G~~~~l--g~~~~-lvnP~d~~~lA~a 397 (814)
+.++. +++..+|+.||++|+||..|||+++.+|||+|| .|+|+|+.+|..+.+ +.+|. +++|.|++++|++
T Consensus 256 ~~g~~--~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G----~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~ 329 (370)
T d2iw1a1 256 FFSGR--NDVSELMAAADLLLHPAYQEAAGIVLLEAITAG----LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEV 329 (370)
T ss_dssp EESCC--SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT----CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHH
T ss_pred CCCCC--CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC----EEEEEECCCCHHHHHCCCCCEEEECCCCCHHHHHHH
T ss_conf 23323--344422233334443222234331133214577----039993899718885279836998699999999999
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf 9999449999999999988579987399999999999999
Q 003508 398 IARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELN 437 (814)
Q Consensus 398 i~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 437 (814)
|.+++.++ +.+.++.++++++++++++..|.+....-++
T Consensus 330 i~~ll~d~-~~~~~~~~~ar~~~~~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 330 LRKALTQS-PLRMAWAENARHYADTQDLYSLPEKAADIIT 368 (370)
T ss_dssp HHHHHHCH-HHHHHHHHHHHHHHHHSCCSCHHHHHHHHHH
T ss_pred HHHHHCCH-HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_conf 99997699-9999999999999998285479999999984
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=1.3e-25 Score=174.29 Aligned_cols=193 Identities=18% Similarity=0.223 Sum_probs=123.9
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCC--CCEEECCC
Q ss_conf 9199992687658998899988850112102989669999998531999459999289967899841103--93698018
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAEN 545 (814)
Q Consensus 468 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~--~l~liaeh 545 (814)
.|||++|+||||++.. ...+++.++++|++|++ .|..|+++|||+...+.++++.+ ..+++++|
T Consensus 2 IKli~~DlDGTLl~~~-------------~~~~~~~~~~~l~~l~~-~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~n 67 (269)
T d1rlma_ 2 VKVIVTDMDGTFLNDA-------------KTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVAEN 67 (269)
T ss_dssp CCEEEECCCCCCSCTT-------------SCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGG
T ss_pred EEEEEEECCCCCCCCC-------------CCCCHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEC
T ss_conf 7999994775672799-------------83996999999999997-899899995999899999999828666267412
Q ss_pred CEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCC---------CCCEEEECCC------------EE--EEEECCC
Q ss_conf 57998289820012655479578988999999976059---------9813320263------------38--9970257
Q 003508 546 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERT---------PRSHFEQRET------------SL--VWNYKYA 602 (814)
Q Consensus 546 G~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~~~~~~---------~Gs~iE~K~~------------~i--~~hyr~a 602 (814)
|+.+...++....- ... .+.....+..+.... .+.++..... .+ ...+...
T Consensus 68 Ga~i~~~~~~~~~~---~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (269)
T d1rlma_ 68 GALVYEHGKQLFHG---ELT---RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEI 141 (269)
T ss_dssp GTEEEETTEEEEEC---CCC---HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGC
T ss_pred EEEEEECCCEEEEE---CCC---HHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf 16999899089973---266---588899999998624842999815736884688188999987523455202537662
Q ss_pred CHH-------HHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
Q ss_conf 713-------3377799999998129989996499994919999978999999999999983415658999755999817
Q 003508 603 DVE-------FGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGH 675 (814)
Q Consensus 603 d~e-------~~~~~a~el~~~l~~~~~~~~~~~v~~g~~~vEI~p~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD 675 (814)
+.. ....+..++.+++ ..........+..+..++||.|+++|||.|+++|++.++ ++.+.+++|||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~lg------i~~~~vi~~GD 214 (269)
T d1rlma_ 142 DDVLFKFSLNLPDEQIPLVIDKL-HVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWD------LSPQNVVAIGD 214 (269)
T ss_dssp CSCEEEEEEECCGGGHHHHHHHH-HHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHT------CCGGGEEEEEC
T ss_pred CCHHEEEEECCCHHHHHHHHHHH-HHHHHCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHC------CCCCCEEEECC
T ss_conf 21024777508889999999999-998515338999758268884586577788887766502------14241899908
Q ss_pred CCCCCHHHHHHCC
Q ss_conf 9999599997636
Q 003508 676 FLGKDEDVYAFFE 688 (814)
Q Consensus 676 ~d~tDE~mF~~~~ 688 (814)
+.||++||+.++
T Consensus 215 -~~ND~~Ml~~ag 226 (269)
T d1rlma_ 215 -SGNDAEMLKMAR 226 (269)
T ss_dssp -SGGGHHHHHHCS
T ss_pred -CCCHHHHHHHCC
T ss_conf -844199998589
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.93 E-value=2e-24 Score=167.03 Aligned_cols=190 Identities=15% Similarity=0.165 Sum_probs=122.0
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCC---CCEEECC
Q ss_conf 9199992687658998899988850112102989669999998531999459999289967899841103---9369801
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---NLWLAAE 544 (814)
Q Consensus 468 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~---~l~liae 544 (814)
.|+|++|+||||++. ...++++++++|++|++ ++.++++|||++..+.+.+... +.++|++
T Consensus 2 ~Kli~~DlDGTL~~~--------------~~~i~~~~~~al~~l~~--~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~ 65 (267)
T d1nf2a_ 2 YRVFVFDLDGTLLND--------------NLEISEKDRRNIEKLSR--KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAY 65 (267)
T ss_dssp BCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEG
T ss_pred EEEEEEECCCCCCCC--------------CCCCCHHHHHHHHHHHC--CCEEEEECCCCHHHHHHHHHHHCCCCCCEECC
T ss_conf 499999177565489--------------59449999999999974--99799989998588899999846567731136
Q ss_pred CCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEE---------------EECCCC--HHH-
Q ss_conf 85799828982001265547957898899999997605998133202633899---------------702577--133-
Q 003508 545 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVW---------------NYKYAD--VEF- 606 (814)
Q Consensus 545 hG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~iE~K~~~i~~---------------hyr~ad--~e~- 606 (814)
||+.+...++....- ...+. +.+.++++..........+...+..... .++..+ .+.
T Consensus 66 nGa~i~~~~~~~i~~--~~i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (267)
T d1nf2a_ 66 NGAIVYLPEEGVILN--EKIPP---EVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELV 140 (267)
T ss_dssp GGTEEEETTTEEEEE--CCBCH---HHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHH
T ss_pred CCEEEEECCCCCCCC--CCCCH---HHHHHHHHHHHHCCCEEEEEECCEEEECCCCHHHHHHHHHCCCCCEECCCHHHHH
T ss_conf 982899546664324--57998---9999999999733842787407668862774888989886078722047688874
Q ss_pred ------------HHHHHHHHHHHHHCCCCCCCCEE-EEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEE
Q ss_conf ------------37779999999812998999649-99949199999789999999999999834156589997559998
Q 003508 607 ------------GRIQARDMLQHLWTGPISNASVE-VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCI 673 (814)
Q Consensus 607 ------------~~~~a~el~~~l~~~~~~~~~~~-v~~g~~~vEI~p~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~i 673 (814)
...+..++.+.+ ...... .+. +..+..++||.|+++|||.|++.|+++++ ++.+.+++|
T Consensus 141 ~~~~~~~i~~~~~~~~~~~~~~~l-~~~~~~-~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~~------i~~~~vva~ 212 (267)
T d1nf2a_ 141 SKMGTTKLLLIDTPERLDELKEIL-SERFKD-VVKVFKSFPTYLEIVPKNVDKGKALRFLRERMN------WKKEEIVVF 212 (267)
T ss_dssp HHHCBSEEEEECCHHHHHHHHHHH-HHHHTT-TSEEEEEETTEEEEECTTCCHHHHHHHHHHHHT------CCGGGEEEE
T ss_pred HHCCCEEEEEECCHHHHHHHHHHH-HHHHCC-CEEEEEEECCEEEECCCCCCHHHHHHHHHHHHC------CCCCCEEEE
T ss_conf 411623788845599999999999-886078-389999621145655877751678999988603------682208998
Q ss_pred ECCCCCCHHHHHHC
Q ss_conf 17999959999763
Q 003508 674 GHFLGKDEDVYAFF 687 (814)
Q Consensus 674 GD~d~tDE~mF~~~ 687 (814)
|| +.||.+||+.+
T Consensus 213 GD-~~ND~~ml~~~ 225 (267)
T d1nf2a_ 213 GD-NENDLFMFEEA 225 (267)
T ss_dssp EC-SHHHHHHHTTC
T ss_pred CC-CCCHHHHHHHC
T ss_conf 08-84409999868
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.93 E-value=1.4e-23 Score=161.80 Aligned_cols=187 Identities=12% Similarity=0.216 Sum_probs=122.7
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCC--CCEEECCC
Q ss_conf 9199992687658998899988850112102989669999998531999459999289967899841103--93698018
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAEN 545 (814)
Q Consensus 468 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~--~l~liaeh 545 (814)
.|||++|+||||++. ...++++++++|++|.+ .|+.++++|||++..+.+.+..+ ..+++++|
T Consensus 1 iKli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~-~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~n 65 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLNS--------------KHQVSLENENALRQAQR-DGIEVVVSTGRAHFDVMSIFEPLGIKTWVISAN 65 (285)
T ss_dssp CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGG
T ss_pred CEEEEEECCCCCCCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHCCCCEEEECC
T ss_conf 909999788664188--------------79419999999999997-889999997999899999999809985899547
Q ss_pred CEEEEECCCC-EEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEE-----------------------------
Q ss_conf 5799828982-0012655479578988999999976059981332026338-----------------------------
Q 003508 546 GMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSL----------------------------- 595 (814)
Q Consensus 546 G~~i~~~~~~-~~~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~iE~K~~~i----------------------------- 595 (814)
|+.+...++. +.. ...+ .+.+.++++.+........+.......
T Consensus 66 G~~i~~~~~~~i~~---~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (285)
T d1nrwa_ 66 GAVIHDPEGRLYHH---ETID---KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLK 139 (285)
T ss_dssp GTEEECTTCCEEEE---CCCC---HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHH
T ss_pred CEEEEECCCCEEEE---CCCC---HHHHHHHHHHHHHCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 31699568743564---1688---89999999999976971687417648860663777777777664057421055653
Q ss_pred -----------------------------EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEE-ECCCEEEEEECCCC
Q ss_conf -----------------------------997025771333777999999981299899964999-94919999978999
Q 003508 596 -----------------------------VWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVV-QGSKSVEVRAVGVT 645 (814)
Q Consensus 596 -----------------------------~~hyr~ad~e~~~~~a~el~~~l~~~~~~~~~~~v~-~g~~~vEI~p~~~n 645 (814)
.+..... ... ........... .....+.+. .|..++||.|+++|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~----~~~~~~~~~~s~~~~ldi~~~~~~ 213 (285)
T d1nrwa_ 140 QAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGF-SFF-KEKLEAGWKRY----EHAEDLTLVSSAEHNFELSSRKAS 213 (285)
T ss_dssp HHHHHHHHTCCEEECSCGGGGTSSSSCCCEEEEEEE-CSC-HHHHHHHHHHH----TTCTTEEEECSSTTEEEEEETTCS
T ss_pred HHHHHHHCCCCCEEECHHHHHHHCCCCHHHEEEECC-CCH-HHHHHHHHHHH----HCCCCEEEEEECCCEEEEECCCCH
T ss_conf 333333101452010318887631452112013112-321-89999999986----327976999947968999555402
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 9999999999834156589997559998179999599997636
Q 003508 646 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 646 KG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~ 688 (814)
||.|+++++++++ ++.+.+++||| +.||.+||+.++
T Consensus 214 K~~ai~~l~~~~g------i~~~~vi~~GD-~~ND~~Ml~~a~ 249 (285)
T d1nrwa_ 214 KGQALKRLAKQLN------IPLEETAAVGD-SLNDKSMLEAAG 249 (285)
T ss_dssp HHHHHHHHHHHTT------CCGGGEEEEES-SGGGHHHHHHSS
T ss_pred HHHHHHHHHHHCC------CCCCCEEEEEC-CHHHHHHHHHCC
T ss_conf 3668988776505------57204999929-788899998489
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=2.6e-24 Score=166.27 Aligned_cols=193 Identities=13% Similarity=0.204 Sum_probs=123.1
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCC-----CEE
Q ss_conf 691999926876589988999888501121029896699999985319994599992899678998411039-----369
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN-----LWL 541 (814)
Q Consensus 467 ~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~~-----l~l 541 (814)
..|||++|+||||++. ...+++++.++|++|++ .|+.|+|+|||++..+.+++..++ .++
T Consensus 3 ~iKli~~DlDGTL~~~--------------~~~i~~~~~~al~~L~~-~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~ 67 (271)
T d1rkqa_ 3 AIKLIAIDMDGTLLLP--------------DHTISPAVKNAIAAARA-RGVNVVLTTGRPYAGVHNYLKELHMEQPGDYC 67 (271)
T ss_dssp CCCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHH-TTCEEEEECSSCGGGTHHHHHHTTCCSTTCEE
T ss_pred CEEEEEEECCCCCCCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHCCCCCCCEE
T ss_conf 7069999577664389--------------79519999999999997-89999999899989999999984676898589
Q ss_pred ECCCCEEEEE-CCCCEEECCCCCCCHHHHHHHHHHHHHHHCC-----CCCCEEEECCCE-------------EEE-----
Q ss_conf 8018579982-8982001265547957898899999997605-----998133202633-------------899-----
Q 003508 542 AAENGMFLRC-TTGKWMTTMPEHLNMEWVDSLKHVFEYFTER-----TPRSHFEQRETS-------------LVW----- 597 (814)
Q Consensus 542 iaehG~~i~~-~~~~~~~~~~~~~~~~w~~~v~~i~~~~~~~-----~~Gs~iE~K~~~-------------i~~----- 597 (814)
+++||+.+.. .++..... ..........+..+.+..... ..+.+...+... ..+
T Consensus 68 i~~nGa~i~~~~~~~~i~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (271)
T d1rkqa_ 68 ITYNGALVQKAADGSTVAQ--TALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEK 145 (271)
T ss_dssp EEGGGTEEEETTTCCEEEE--CCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGG
T ss_pred EECCCEEEECCCCCEEEEE--ECCCHHHHHHHHHHHHHHCCEEEEEECCEEEECCCCCHHHHHHHHHHCCCCCCCCHHHH
T ss_conf 9868516750677708985--02007788887888886164078873132774056611677777764057610031655
Q ss_pred ---------EECCCCHHHHHHHHHHHHHHHHCCCCCCCCEE-EEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf ---------70257713337779999999812998999649-99949199999789999999999999834156589997
Q 003508 598 ---------NYKYADVEFGRIQARDMLQHLWTGPISNASVE-VVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAI 667 (814)
Q Consensus 598 ---------hyr~ad~e~~~~~a~el~~~l~~~~~~~~~~~-v~~g~~~vEI~p~~~nKG~ai~~ll~~~~~~~~~~~~~ 667 (814)
.....+++ ...+..+.+ ...+.. .+. +..|...+||.|+++|||.|++.|++.++ .+.
T Consensus 146 ~~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~~~~-~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~------i~~ 213 (271)
T d1rkqa_ 146 MDPNTQFLKVMMIDEPA----ILDQAIARI-PQEVKE-KYTVLKSAPYFLEILDKRVNKGTGVKSLADVLG------IKP 213 (271)
T ss_dssp SCTTCCBCEEEEECCHH----HHHHHHHHS-CHHHHH-HEEEEEEETTEEEEEETTCSHHHHHHHHHHHHT------CCG
T ss_pred CCCCCCEEEEEEECCHH----HHHHHHHHH-HHHHHC-CEEEEEECCCEEEECCCCCCCCCCCCEEHHHCC------CCH
T ss_conf 07655458999946777----899999999-998505-638999547268852788876542000011001------142
Q ss_pred CEEEEEECCCCCCHHHHHHCCC
Q ss_conf 5599981799995999976367
Q 003508 668 DYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 668 d~vi~iGD~d~tDE~mF~~~~~ 689 (814)
+.+++||| +.||.+||+.++.
T Consensus 214 ~~ii~~GD-~~ND~~ml~~~~~ 234 (271)
T d1rkqa_ 214 EEIMAIGD-QENDIAMIEYAGV 234 (271)
T ss_dssp GGEEEEEC-SGGGHHHHHHSSE
T ss_pred HCEEEEEC-CHHHHHHHHHCCC
T ss_conf 01799918-6767999985891
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.91 E-value=1.3e-22 Score=155.68 Aligned_cols=186 Identities=16% Similarity=0.236 Sum_probs=129.3
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCC--CCEEECC
Q ss_conf 69199992687658998899988850112102989669999998531999459999289967899841103--9369801
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAE 544 (814)
Q Consensus 467 ~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~--~l~liae 544 (814)
|.|+|++|+||||++. ...+++++.++|++|.+ .|..|+++|||+...+...+..+ +..++++
T Consensus 1 kiK~i~~D~DGTL~~~--------------~~~i~~~~~~~l~~l~~-~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~ 65 (230)
T d1wr8a_ 1 KIKAISIDIDGTITYP--------------NRMIHEKALEAIRRAES-LGIPIMLVTGNTVQFAEAASILIGTSGPVVAE 65 (230)
T ss_dssp CCCEEEEESTTTTBCT--------------TSCBCHHHHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHHTCCSCEEEG
T ss_pred CCEEEEEECCCCCCCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHCCCCCCCCCC
T ss_conf 9369999167777379--------------89469999999999986-79959999278688899999864887320012
Q ss_pred CCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 85799828982001265547957898899999997605998133202633899702577133377799999998129989
Q 003508 545 NGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPIS 624 (814)
Q Consensus 545 hG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~iE~K~~~i~~hyr~ad~e~~~~~a~el~~~l~~~~~~ 624 (814)
||+.+........ . ......+ .....+...+...........+...+.+.-...+.+ ..+++.+++
T Consensus 66 ~g~~~~~~~~~~~--~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------ 131 (230)
T d1wr8a_ 66 DGGAISYKKKRIF--L-ASMDEEW-ILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVE----TVREIINEL------ 131 (230)
T ss_dssp GGTEEEETTEEEE--S-CCCSHHH-HHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHH----HHHHHHHHT------
T ss_pred CCEEEECCCCCCC--C-CCCCHHH-HHHHHHHHHCCCCCCEEECCCCEEEEEEECCCCCHH----HHHHHHHHH------
T ss_conf 2201002421000--2-3441889-999999986266542144144224589934611699----999999983------
Q ss_pred CCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 9964999949199999789999999999999834156589997559998179999599997636
Q 003508 625 NASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 625 ~~~~~v~~g~~~vEI~p~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~ 688 (814)
...+....+...+|+.|.+.+|+.+++.+++.++ .+++.+++||| +.||++||+.++
T Consensus 132 ~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~------i~~~~~~~iGD-~~NDi~ml~~ag 188 (230)
T d1wr8a_ 132 NLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG------IKPKEVAHVGD-GENDLDAFKVVG 188 (230)
T ss_dssp TCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT------SCGGGEEEEEC-SGGGHHHHHHSS
T ss_pred CCCEEEEECCCEEEEEECCCCCCHHHCCCCCCCC------CCHHHEEEEEC-CCCHHHHHHHCC
T ss_conf 6652896089489994077676133201121100------13324256626-730799999789
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.91 E-value=2e-23 Score=160.74 Aligned_cols=195 Identities=17% Similarity=0.243 Sum_probs=127.2
Q ss_pred HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCC--
Q ss_conf 999971169199992687658998899988850112102989669999998531999459999289967899841103--
Q 003508 460 IERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY-- 537 (814)
Q Consensus 460 ~~~y~~s~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~-- 537 (814)
-+++..+..|+|++|+||||+.. ....++++++++|.+|.+ .|+.|+|+|||++..+.+.++.+
T Consensus 2 ~~~~~~~~ikli~~DlDGTLl~~-------------~~~~i~~~~~~al~~l~~-~Gi~v~i~TGR~~~~~~~~~~~l~~ 67 (283)
T d2b30a1 2 EEALKGADIKLLLIDFDGTLFVD-------------KDIKVPSENIDAIKEAIE-KGYMVSICTGRSKVGILSAFGEENL 67 (283)
T ss_dssp HHHTTTCCCCEEEEETBTTTBCC-------------TTTCSCHHHHHHHHHHHH-HTCEEEEECSSCHHHHHHHHCHHHH
T ss_pred CCCCCCCCCCEEEEECCCCCCCC-------------CCCCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHCC
T ss_conf 66675359619999888888489-------------899679999999999998-8998999869998999999998476
Q ss_pred ------CCEEECCCCEEEEECCCC-EEECCCCCCCHHHHHHHHHHHHHHHCCCC--CCEEEECCCEEE------------
Q ss_conf ------936980185799828982-00126554795789889999999760599--813320263389------------
Q 003508 538 ------NLWLAAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKHVFEYFTERTP--RSHFEQRETSLV------------ 596 (814)
Q Consensus 538 ------~l~liaehG~~i~~~~~~-~~~~~~~~~~~~w~~~v~~i~~~~~~~~~--Gs~iE~K~~~i~------------ 596 (814)
....++.||+.+....+. ... ...+.. ....+++.+..... ..+.........
T Consensus 68 ~~~~~~~~~~i~~~g~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (283)
T d2b30a1 68 KKMNFYGMPGVYINGTIVYDQIGYTLLD---ETIETD---VYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQK 141 (283)
T ss_dssp HHHTCCSCSEEEGGGTEEECTTCCEEEE---CCCCHH---HHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHH
T ss_pred CCCCCCCCCEEEEEEEEEECCCCCEEEE---CCCCHH---HHHHHHHHHHHHCCCCEEEEEECCEEEEECCCHHHHHHHH
T ss_conf 6545557743787545898489968310---256878---8899998877506651589973230687046327788888
Q ss_pred ------------------------EEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHH
Q ss_conf ------------------------97025771333777999999981299899964999949199999789999999999
Q 003508 597 ------------------------WNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDR 652 (814)
Q Consensus 597 ------------------------~hyr~ad~e~~~~~a~el~~~l~~~~~~~~~~~v~~g~~~vEI~p~~~nKG~ai~~ 652 (814)
+.+. ++ ....++...+ ...+......+..+..++||.|++++||.+++.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~K~~~l~~ 214 (283)
T d2b30a1 142 MYSENRSIIIRHNEMLKYRTMNKLMIVL--DP----SESKTVIGNL-KQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINY 214 (283)
T ss_dssp HHSCCCCEEECHHHHTTCCCCSEEEECC--CT----TTHHHHHHHH-HHHSTTTEEEEECTTSCEEEEETTCCHHHHHHH
T ss_pred HHHCCCCCCCCHHHHHHCCCCEEEEEEC--CH----HHHHHHHHHH-HHHHCCCCEEEEECCEEEEECCCCCHHHHHHHH
T ss_conf 7411655336677774026613899966--88----9999999999-998456613788524067624776505778887
Q ss_pred HHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 999834156589997559998179999599997636
Q 003508 653 ILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 653 ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~ 688 (814)
+++.++ .+.+.+++||| +.||.+||+.++
T Consensus 215 l~~~~~------i~~~~vi~~GD-~~ND~~Ml~~a~ 243 (283)
T d2b30a1 215 LLKHYN------ISNDQVLVVGD-AENDIAMLSNFK 243 (283)
T ss_dssp HHHHTT------CCGGGEEEEEC-SGGGHHHHHSCS
T ss_pred HHHHCC------CCCCEEEEECC-CHHHHHHHHHCC
T ss_conf 766410------02020799648-763699998589
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.91 E-value=4.1e-23 Score=158.79 Aligned_cols=191 Identities=15% Similarity=0.157 Sum_probs=119.7
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCC--C--CCEEEC
Q ss_conf 919999268765899889998885011210298966999999853199945999928996789984110--3--936980
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE--Y--NLWLAA 543 (814)
Q Consensus 468 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~--~--~l~lia 543 (814)
.|+||||+||||++. +...++++++++|++|.+ .|..|+++|||+...+...+.. . ..++|+
T Consensus 1 ~k~if~DlDGTL~~~-------------~~~~i~~~~~~al~~l~~-~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~ 66 (260)
T d2rbka1 1 TKALFFDIDGTLVSF-------------ETHRIPSSTIEALEAAHA-KGLKIFIATGRPKAIINNLSELQDRNLIDGYIT 66 (260)
T ss_dssp CCEEEECSBTTTBCT-------------TTSSCCHHHHHHHHHHHH-TTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEE
T ss_pred CEEEEEECCCCCCCC-------------CCCCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEE
T ss_conf 929999888887189-------------979989999999999997-889999988998899999999971588773476
Q ss_pred CCCEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEE-EECCCEEEE-------------EECCCC-HHHHH
Q ss_conf 185799828982001265547957898899999997605998133-202633899-------------702577-13337
Q 003508 544 ENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHF-EQRETSLVW-------------NYKYAD-VEFGR 608 (814)
Q Consensus 544 ehG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~i-E~K~~~i~~-------------hyr~ad-~e~~~ 608 (814)
+||+++..+++.... ...+......+.+.++.. .....+ +........ +....+ ..+..
T Consensus 67 ~nGa~i~~~~~~i~~---~~l~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (260)
T d2rbka1 67 MNGAYCFVGEEVIYK---SAIPQEEVKAMAAFCEKK---GVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEE 140 (260)
T ss_dssp GGGTEEEETTEEEEE---CCCCHHHHHHHHHHHHHH---TCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHH
T ss_pred CCCCCCCCCCCCCCC---CCCCHHHHHHHHHHHHHC---CCCEEEEECCCEEECCCHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 277401257532104---678889999999999973---98689983575541364078999999863257676567767
Q ss_pred -----------HHHHHHHHHHHCCCCCCCCEEEEE-CCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf -----------779999999812998999649999-49199999789999999999999834156589997559998179
Q 003508 609 -----------IQARDMLQHLWTGPISNASVEVVQ-GSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHF 676 (814)
Q Consensus 609 -----------~~a~el~~~l~~~~~~~~~~~v~~-g~~~vEI~p~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~ 676 (814)
....+....+...+ ..+.+.. +..++||.|+++|||.|+++|+++++ ++.+.+++|||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ei~p~~~sK~~al~~l~~~~~------i~~~~~~a~GD- 210 (260)
T d2rbka1 141 ASNKEVIQMTPFITEEEEKEVLPSI---PTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFG------IKLEETMSFGD- 210 (260)
T ss_dssp HHTSCCSEEEECCCHHHHHHHGGGS---TTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHT------CCGGGEEEEEC-
T ss_pred HCCCCEEEEEECCCHHHHHHHHHHH---CCCCCEEECCCEEEEEECCCCHHHHHHHHHHHCC------CCHHHEEEECC-
T ss_conf 3676469885127889999999872---1554014558679997488999999999987322------35755167658-
Q ss_pred CCCCHHHHHHCC
Q ss_conf 999599997636
Q 003508 677 LGKDEDVYAFFE 688 (814)
Q Consensus 677 d~tDE~mF~~~~ 688 (814)
+.||.+||+.++
T Consensus 211 ~~ND~~Ml~~a~ 222 (260)
T d2rbka1 211 GGNDISMLRHAA 222 (260)
T ss_dssp SGGGHHHHHHSS
T ss_pred CCCCHHHHHHCC
T ss_conf 855599998489
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.89 E-value=1.4e-22 Score=155.57 Aligned_cols=187 Identities=12% Similarity=0.145 Sum_probs=122.2
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCC----CEEE
Q ss_conf 691999926876589988999888501121029896699999985319994599992899678998411039----3698
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN----LWLA 542 (814)
Q Consensus 467 ~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~~----l~li 542 (814)
++.||++|+||||++. .. .++..+++.++.+ .+..|+|+|||++..+.++++.++ .+++
T Consensus 2 ~~~li~~DlDGTL~~~--------------~~--~~~~~~~~~~~~~-~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i 64 (244)
T d1s2oa1 2 RQLLLISDLDNTWVGD--------------QQ--ALEHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWL 64 (244)
T ss_dssp CSEEEEECTBTTTBSC--------------HH--HHHHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEE
T ss_pred CCEEEEEECCCCCCCC--------------CC--CHHHHHHHHHHHC-CCCEEEEECCCCHHHHHHHHHHCCCCCCCEEE
T ss_conf 7669999896667999--------------98--9899999999981-99989998899989999999973998776588
Q ss_pred CCCCEEEEECCCC---EEECCCCCCCHHHHHHHHHHHHHHHCCCCCCE----EEECCCEEEEEECCCCHHHHHHHHHHHH
Q ss_conf 0185799828982---00126554795789889999999760599813----3202633899702577133377799999
Q 003508 543 AENGMFLRCTTGK---WMTTMPEHLNMEWVDSLKHVFEYFTERTPRSH----FEQRETSLVWNYKYADVEFGRIQARDML 615 (814)
Q Consensus 543 aehG~~i~~~~~~---~~~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~----iE~K~~~i~~hyr~ad~e~~~~~a~el~ 615 (814)
++||+.+....+. |...... .|. ..++..+....++.. .+.....+.+++.....+. ...++.
T Consensus 65 ~~~G~~i~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 134 (244)
T d1s2oa1 65 TAVGSEIYHPEGLDQHWADYLSE----HWQ---RDILQAIADGFEALKPQSPLEQNPWKISYHLDPQACPT---VIDQLT 134 (244)
T ss_dssp ETTTTEEEETTEECHHHHHHHHT----TCC---HHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSCTH---HHHHHH
T ss_pred ECCCEEEEECCCCCHHHHHHHHH----HHH---HHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCCCCCHH---HHHHHH
T ss_conf 51625999716741678988878----876---87999998535543325724406268999525211589---999999
Q ss_pred HHHHCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCC
Q ss_conf 99812998999649999491999997899999999999998341565899975599981799995999976367
Q 003508 616 QHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 616 ~~l~~~~~~~~~~~v~~g~~~vEI~p~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~~ 689 (814)
..+ ..... .......+...+||.|++++||.|++.+++.++ .+.+.+++||| +.||.+||+.++.
T Consensus 135 ~~~-~~~~~-~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~g------i~~~~~v~~GD-~~ND~~Ml~~~~~ 199 (244)
T d1s2oa1 135 EML-KETGI-PVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLA------MEPSQTLVCGD-SGNDIGLFETSAR 199 (244)
T ss_dssp HHH-HTSSC-CEEEEEETTTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEEEC-SGGGHHHHTSSSE
T ss_pred HHH-HHHCC-CCEEEECCCCEEEEEECCCCHHHHHHHHHHHCC------CCHHHEEEECC-CCCCHHHHHHCCC
T ss_conf 999-86323-412663078189998676415577888877415------77303799758-8877999961891
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.88 E-value=2.3e-21 Score=147.98 Aligned_cols=180 Identities=17% Similarity=0.165 Sum_probs=124.0
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCC--CCEEECCC
Q ss_conf 9199992687658998899988850112102989669999998531999459999289967899841103--93698018
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAEN 545 (814)
Q Consensus 468 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~--~l~liaeh 545 (814)
.|+|+||+||||++. ...+++++.++|++|.+ .|..|+++|||+...+..+...+ ...++++|
T Consensus 3 iKli~~D~DGTL~~~--------------~~~i~~~~~~al~~l~~-~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~ 67 (225)
T d1l6ra_ 3 IRLAAIDVDGNLTDR--------------DRLISTKAIESIRSAEK-KGLTVSLLSGNVIPVVYALKIFLGINGPVFGEN 67 (225)
T ss_dssp CCEEEEEHHHHSBCT--------------TSCBCHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGG
T ss_pred EEEEEEECCCCCCCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEC
T ss_conf 089999658877389--------------99479999999999987-799899982886032699999819885288604
Q ss_pred CEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE-EC--CCEEEEEECCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 57998289820012655479578988999999976059981332-02--6338997025771333777999999981299
Q 003508 546 GMFLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFE-QR--ETSLVWNYKYADVEFGRIQARDMLQHLWTGP 622 (814)
Q Consensus 546 G~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~iE-~K--~~~i~~hyr~ad~e~~~~~a~el~~~l~~~~ 622 (814)
|+.+...++...... . .+.+...++....+..-..+. .+ .....+-. +++ +...+...+ .
T Consensus 68 G~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~-~-- 130 (225)
T d1l6ra_ 68 GGIMFDNDGSIKKFF----S---NEGTNKFLEEMSKRTSMRSILTNRWREASTGFDI---DPE----DVDYVRKEA-E-- 130 (225)
T ss_dssp GTEEECTTSCEEESS----C---SHHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEBC---CGG----GHHHHHHHH-H--
T ss_pred CEEEEECCCCEEEEC----C---HHHHHHHHHHHHHHCCCCEEECCCCEEEEECCCC---CHH----HHHHHHHHH-H--
T ss_conf 169996795178736----8---6899999999987348542420322023100235---899----999999987-4--
Q ss_pred CCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 899964999949199999789999999999999834156589997559998179999599997636
Q 003508 623 ISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 623 ~~~~~~~v~~g~~~vEI~p~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~ 688 (814)
...+.+..+...+|+.|++.+||.+++++++.++ .+.+.+++||| +.||.+||+.++
T Consensus 131 --~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~------i~~~~v~~~GD-s~nD~~m~~~a~ 187 (225)
T d1l6ra_ 131 --SRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYS------LEYDEILVIGD-SNNDMPMFQLPV 187 (225)
T ss_dssp --TTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTT------CCGGGEEEECC-SGGGHHHHTSSS
T ss_pred --HCCCEEEECCCEEEECCCCCCHHHHHHHHHHHHC------CCHHHEEEECC-CCCHHHHHHHCC
T ss_conf --2572999889179963876522789998766510------02302256448-843599999779
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=1.8e-20 Score=142.41 Aligned_cols=195 Identities=16% Similarity=0.206 Sum_probs=113.7
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCC----CCEEE
Q ss_conf 69199992687658998899988850112102989669999998531999459999289967899841103----93698
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY----NLWLA 542 (814)
Q Consensus 467 ~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~----~l~li 542 (814)
..||++||+||||++. ...++++++++|++|.+ ++.++|+|||+...+...+... ..+++
T Consensus 2 ~~kl~~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~--~g~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~ 65 (243)
T d2amya1 2 GPALCLFDVDGTLTAP--------------RQKITKEMDDFLQKLRQ--KIKIGVVGGSDFEKVQEQLGNDVVEKYDYVF 65 (243)
T ss_dssp CSEEEEEESBTTTBCT--------------TSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHCTTHHHHCSEEE
T ss_pred CCEEEEECCCCCEECC--------------CCCCCHHHHHHHHHHHC--CCCEEEECCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 9879998674782089--------------99489999999999980--9989999589868867887652165642995
Q ss_pred CCCCEEEEECCCC-EEECCCCCCCHHHHH-HHHHHHHHHHCCCC----CCEEEECCCEEEEEECCC--CHHHH-------
Q ss_conf 0185799828982-001265547957898-89999999760599----813320263389970257--71333-------
Q 003508 543 AENGMFLRCTTGK-WMTTMPEHLNMEWVD-SLKHVFEYFTERTP----RSHFEQRETSLVWNYKYA--DVEFG------- 607 (814)
Q Consensus 543 aehG~~i~~~~~~-~~~~~~~~~~~~w~~-~v~~i~~~~~~~~~----Gs~iE~K~~~i~~hyr~a--d~e~~------- 607 (814)
+.+|+.+...++. +.............. .............. ....+.......+..... +....
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (243)
T d2amya1 66 PENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELD 145 (243)
T ss_dssp SGGGTEEEETTEEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 27479993388511100012888888988887640001000145312220223101121122222235423301232110
Q ss_pred --HHHHHHHHHHHHCCCCCCCCEEE-EECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC----CC
Q ss_conf --77799999998129989996499-994919999978999999999999983415658999755999817999----95
Q 003508 608 --RIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG----KD 680 (814)
Q Consensus 608 --~~~a~el~~~l~~~~~~~~~~~v-~~g~~~vEI~p~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~----tD 680 (814)
.....+....+ ........+.+ ..+..++||.|+++|||.|+++|++ .+.+.+++||| +. ||
T Consensus 146 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~l~~---------~~~~ev~afGD-~~~~g~ND 214 (243)
T d2amya1 146 KKENIRQKFVADL-RKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVEN---------DGYKTIYFFGD-KTMPGGND 214 (243)
T ss_dssp HHHCHHHHHHHHH-HHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTTT---------SCCSEEEEEEC-SCC---CC
T ss_pred CCHHHHHHHHHHH-HHHHCCCCEEEEECCCCCCEEECCCCCHHHHHHHHHC---------CCCCEEEEECC-CCCCCCCC
T ss_conf 0103358999999-9871345527995289641551321678999999848---------99362999868-99999976
Q ss_pred HHHHHHCC
Q ss_conf 99997636
Q 003508 681 EDVYAFFE 688 (814)
Q Consensus 681 E~mF~~~~ 688 (814)
++||++++
T Consensus 215 i~Ml~~~g 222 (243)
T d2amya1 215 HEIFTDPR 222 (243)
T ss_dssp CHHHHCTT
T ss_pred HHHHHCCC
T ss_conf 99997159
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.86 E-value=1.1e-20 Score=143.68 Aligned_cols=181 Identities=17% Similarity=0.084 Sum_probs=110.2
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCC--CCEEECCC
Q ss_conf 9199992687658998899988850112102989669999998531999459999289967899841103--93698018
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY--NLWLAAEN 545 (814)
Q Consensus 468 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~--~l~liaeh 545 (814)
.|+||+|+||||++.. .+++++++|++|.+ .|..|+++|||++..+..++..+ ...++++|
T Consensus 2 iKli~~DlDGTLl~~~----------------~~~~~~~ai~~l~~-~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~n 64 (243)
T d1wzca1 2 IRLIFLDIDKTLIPGY----------------EPDPAKPIIEELKD-MGFEIIFNSSKTRAEQEYYRKELEVETPFISEN 64 (243)
T ss_dssp EEEEEECCBTTTBSSS----------------CSGGGHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHTCCSCEEETT
T ss_pred CEEEEEECCCCCCCCC----------------CCHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 3799992777778999----------------88899999999998-899999991988899999999836442100147
Q ss_pred CEEEEECCCCEE-ECCC--------CCCCHHHHHHHHHHHHHH---HCCCCCCEE-------------------EECCCE
Q ss_conf 579982898200-1265--------547957898899999997---605998133-------------------202633
Q 003508 546 GMFLRCTTGKWM-TTMP--------EHLNMEWVDSLKHVFEYF---TERTPRSHF-------------------EQRETS 594 (814)
Q Consensus 546 G~~i~~~~~~~~-~~~~--------~~~~~~w~~~v~~i~~~~---~~~~~Gs~i-------------------E~K~~~ 594 (814)
|+.+...++... .... ...... .+.+...+..+ ......... ..+...
T Consensus 65 Ga~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (243)
T d1wzca1 65 GSAIFIPKGYFPFDVKGKEVGNYIVIELGIR-VEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYS 143 (243)
T ss_dssp TTEEEECTTCCC----------CEEEECSCC-HHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSE
T ss_pred CCEEECCCCCEECCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
T ss_conf 8489708984303543067788999987521-999999997655311210031344888877624764677888863134
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
Q ss_conf 89970257713337779999999812998999649999491999997899999999999998341565899975599981
Q 003508 595 LVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIG 674 (814)
Q Consensus 595 i~~hyr~ad~e~~~~~a~el~~~l~~~~~~~~~~~v~~g~~~vEI~p~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iG 674 (814)
........ ....+.... ..+.+..+. .+++.|.+++||.|++.+++.++. .+.+.+++||
T Consensus 144 ~~~~~~~~------~~~~~~~~~--------~~~~~~~~~-~~~~~~~~~~K~~al~~l~~~~~~-----~~~~~~~a~G 203 (243)
T d1wzca1 144 ETIFEWSR------DGWEEVLVE--------GGFKVTMGS-RFYTVHGNSDKGKAAKILLDFYKR-----LGQIESYAVG 203 (243)
T ss_dssp EEECBCSS------SCHHHHHHH--------TTCEEEECS-SSEEEECSCCHHHHHHHHHHHHHT-----TSCEEEEEEE
T ss_pred HHHHHHHH------HHHHHHHHH--------CCEEEEECC-CCCCHHHHHCCHHHHHHHHHHHCC-----CCCCCEEEEC
T ss_conf 11344446------789986552--------376884236-530010311007799999998359-----9914199984
Q ss_pred CCCCCCHHHHHHC
Q ss_conf 7999959999763
Q 003508 675 HFLGKDEDVYAFF 687 (814)
Q Consensus 675 D~d~tDE~mF~~~ 687 (814)
| +.||.+||+++
T Consensus 204 D-~~ND~~Ml~~a 215 (243)
T d1wzca1 204 D-SYNDFPMFEVV 215 (243)
T ss_dssp C-SGGGHHHHTTS
T ss_pred C-CHHHHHHHHCC
T ss_conf 9-88589999849
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.85 E-value=3.4e-20 Score=140.68 Aligned_cols=193 Identities=15% Similarity=0.155 Sum_probs=116.9
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCC---CCEEEC
Q ss_conf 69199992687658998899988850112102989669999998531999459999289967899841103---936980
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEY---NLWLAA 543 (814)
Q Consensus 467 ~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~---~l~lia 543 (814)
+..|||+|+||||++. ...++++++++|++|.+ .|+.++++|||+...+.+.+..+ +..+++
T Consensus 3 ~~~li~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~-~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~ 67 (232)
T d1xvia_ 3 QPLLVFSDLDGTLLDS--------------HSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIA 67 (232)
T ss_dssp CCEEEEEECTTTTSCS--------------SCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEE
T ss_pred CCEEEEEECCCCCCCC--------------CCCCCHHHHHHHHHHHH-CCCEEEEEECCCHHHCHHHHHHHCCCCCEEEC
T ss_conf 9879999788875289--------------69479999999999997-79989999689736530688873457845971
Q ss_pred CCCEEEEECCC-CEEECCC---CCCCHHHHHHHHHHHHHHHCCCCCCEEEE----------------------CCCEEEE
Q ss_conf 18579982898-2001265---54795789889999999760599813320----------------------2633899
Q 003508 544 ENGMFLRCTTG-KWMTTMP---EHLNMEWVDSLKHVFEYFTERTPRSHFEQ----------------------RETSLVW 597 (814)
Q Consensus 544 ehG~~i~~~~~-~~~~~~~---~~~~~~w~~~v~~i~~~~~~~~~Gs~iE~----------------------K~~~i~~ 597 (814)
+||+.+..... ....... ......+.............. ....... .......
T Consensus 68 ~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
T d1xvia_ 68 ENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHF-KFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTL 146 (232)
T ss_dssp GGGTEEECCTTCTTSTTTTEEECSSCHHHHHHHHHHHHHHHCC-CEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEE
T ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCEEEEE
T ss_conf 6976999357753120145555577899998765422222021-212332023555433310230134554411124531
Q ss_pred EECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC
Q ss_conf 70257713337779999999812998999649999491999997899999999999998341565899975599981799
Q 003508 598 NYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFL 677 (814)
Q Consensus 598 hyr~ad~e~~~~~a~el~~~l~~~~~~~~~~~v~~g~~~vEI~p~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d 677 (814)
... ... .......... . .....+..+...+++.|++++||.+++.|++.+..-+ ++.+.+++||| +
T Consensus 147 ~~~--~~~---~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~K~~~~~~l~~~~~~l~---i~~~~~iafGD-~ 212 (232)
T d1xvia_ 147 IWR--DSD---ERMAQFTARL-N----ELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLS---GKRPTTLGLGD-G 212 (232)
T ss_dssp EEC--SCH---HHHHHHHHHH-H----HTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHH---SSCCEEEEEES-S
T ss_pred CCC--CCH---HHHHHHHHHH-H----HCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHHHCC---CCHHCEEEECC-C
T ss_conf 022--529---9998899876-5----3055033225302214788517899999999999759---89521999849-7
Q ss_pred CCCHHHHHHCCC
Q ss_conf 995999976367
Q 003508 678 GKDEDVYAFFEP 689 (814)
Q Consensus 678 ~tDE~mF~~~~~ 689 (814)
.||.+||++++.
T Consensus 213 ~NDl~Ml~~a~~ 224 (232)
T d1xvia_ 213 PNDAPLLEVMDY 224 (232)
T ss_dssp GGGHHHHHTSSE
T ss_pred HHHHHHHHHCCE
T ss_conf 868999981990
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.82 E-value=2.1e-19 Score=135.78 Aligned_cols=144 Identities=19% Similarity=0.228 Sum_probs=112.6
Q ss_pred CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
Q ss_conf 81999930544468978999999998986846658667999963999993789999999999999850345988843389
Q 003508 240 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 319 (814)
Q Consensus 240 ~~iIl~VgRl~~~KGi~~~l~A~~~ll~~~P~~~~~v~Lv~i~~p~~~~~~~y~~l~~~l~~lv~~iN~~~g~~~~~~v~ 319 (814)
...+++|||+++.||++.+++|++.+ |+. .|+++|.... .+.++.+.+++.+. . ...|+
T Consensus 12 ~~~~l~iGrl~~~K~~~~~i~a~~~l----~~~----~l~ivg~~~~--~~~~~~~~~~~~~~--------~---~~~v~ 70 (166)
T d2f9fa1 12 GDFWLSVNRIYPEKRIELQLEVFKKL----QDE----KLYIVGWFSK--GDHAERYARKIMKI--------A---PDNVK 70 (166)
T ss_dssp CSCEEEECCSSGGGTHHHHHHHHHHC----TTS----CEEEEBCCCT--TSTHHHHHHHHHHH--------S---CTTEE
T ss_pred CCEEEEEECCCCCCCHHHHHHHHHHH----CCC----EEEEEEECCC--CCCHHHHHHHHCCC--------C---CCCEE
T ss_conf 99999992375434999999999983----397----4999972244--54223333220235--------6---67588
Q ss_pred EECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCC--CCCEEEECCCCHHHHHHH
Q ss_conf 946889988999999866689987897668814887766036998439991887810003--896399899999999999
Q 003508 320 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANA 397 (814)
Q Consensus 320 ~~~~~i~~~el~aly~~ADv~v~tS~~EG~~Lv~lEama~~~~~~g~lVlS~~~G~~~~l--g~~~~lvnP~d~~~lA~a 397 (814)
+ .|.++.+++..+|+.||+++.||..||++++.+|||+|+ .|+|+|+.+|..+.+ +.+|+.+++ |+++++++
T Consensus 71 ~-~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g----~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~ 144 (166)
T d2f9fa1 71 F-LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG----KPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDA 144 (166)
T ss_dssp E-EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT----CCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHH
T ss_pred E-EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCEEECCCCCEEEECCCCCCCCCCC-CHHHHHHH
T ss_conf 7-421221112222222222332122112332211011223----32205527864033048841246899-99999999
Q ss_pred HHHHHCCCHHHHH
Q ss_conf 9999449999999
Q 003508 398 IARALNMSPEERE 410 (814)
Q Consensus 398 i~~~L~~~~~er~ 410 (814)
|..++.++...++
T Consensus 145 i~~l~~~~~~~~~ 157 (166)
T d2f9fa1 145 MKKVSKNPDKFKK 157 (166)
T ss_dssp HHHHHHCTTTTHH
T ss_pred HHHHHHCHHHHHH
T ss_conf 9999809999999
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=2.4e-18 Score=129.22 Aligned_cols=193 Identities=20% Similarity=0.208 Sum_probs=107.4
Q ss_pred EEEE-EECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCC-C-----CCEE
Q ss_conf 1999-9268765899889998885011210298966999999853199945999928996789984110-3-----9369
Q 003508 469 RLLI-LGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQE-Y-----NLWL 541 (814)
Q Consensus 469 rLi~-lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~-~-----~l~l 541 (814)
|+|+ ||+||||++. ..+++++++++|++|++ .| .++++|||+.......+.. . ..++
T Consensus 1 k~i~lFDlDGTLl~~--------------~~~is~~~~~~i~~l~~-~g-~~~i~tgrr~~~~~~~~~~~~~~~~~~~~~ 64 (244)
T d2fuea1 1 RVLCLFDVDGTLTPA--------------RQKIDPEVAAFLQKLRS-RV-QIGVVGGSDYCKIAEQLGDGDEVIEKFDYV 64 (244)
T ss_dssp CEEEEEESBTTTBST--------------TSCCCHHHHHHHHHHTT-TS-EEEEECSSCHHHHHHHHSSTTTHHHHCSEE
T ss_pred CEEEEECCCCCCCCC--------------CCCCCHHHHHHHHHHHH-CC-CEEEEECCCHHHHHHHHHHHHCCCCCCCEE
T ss_conf 979998445683499--------------89589999999999986-89-999996698065134566542334554223
Q ss_pred ECCCCEEEEECCCC-EEECCCCCCCHHHHHHHHH-HHHHHHCCCC----CCEEEECCCEEEEEECCCCHHHH--------
Q ss_conf 80185799828982-0012655479578988999-9999760599----81332026338997025771333--------
Q 003508 542 AAENGMFLRCTTGK-WMTTMPEHLNMEWVDSLKH-VFEYFTERTP----RSHFEQRETSLVWNYKYADVEFG-------- 607 (814)
Q Consensus 542 iaehG~~i~~~~~~-~~~~~~~~~~~~w~~~v~~-i~~~~~~~~~----Gs~iE~K~~~i~~hyr~ad~e~~-------- 607 (814)
++.+|+.+...+.. +.................. .......... ..+.........++.........
T Consensus 65 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (244)
T d2fuea1 65 FAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSEL 144 (244)
T ss_dssp EEGGGTEEEETTEECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHH
T ss_pred ECCCCEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 11440023037851212013577766677777764233310110221124212344444202322333203454566653
Q ss_pred ---HHHHHHHHHHHHCCCCCCCCEEE-EECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC----C
Q ss_conf ---77799999998129989996499-994919999978999999999999983415658999755999817999----9
Q 003508 608 ---RIQARDMLQHLWTGPISNASVEV-VQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLG----K 679 (814)
Q Consensus 608 ---~~~a~el~~~l~~~~~~~~~~~v-~~g~~~vEI~p~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~----t 679 (814)
.....+....+.... ....+.+ ..+..++||.|+++|||.|++.|++. +.+.+++||| +. |
T Consensus 145 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lei~~~~vsKg~al~~L~~~---------~~~ev~afGD-~~~~G~N 213 (244)
T d2fuea1 145 DKKEKIREKFVEALKTEF-AGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQD---------SFDTIHFFGN-ETSPGGN 213 (244)
T ss_dssp HHHHCHHHHHHHHHHHHT-TTSCEEEECCSSSCEEEEETTCSTTHHHHHHTTS---------CCSEEEEEES-CCSTTST
T ss_pred CCCHHHHHHHHHHHHHHH-HCCCEEEEECCCCCCEECCHHCCHHHHHHHHHCC---------CHHHEEEECC-CCCCCCC
T ss_conf 001036788899999885-1034267641676003203220278999999669---------8445999868-8999997
Q ss_pred CHHHHHHCC
Q ss_conf 599997636
Q 003508 680 DEDVYAFFE 688 (814)
Q Consensus 680 DE~mF~~~~ 688 (814)
|++||+.++
T Consensus 214 D~eml~~a~ 222 (244)
T d2fuea1 214 DFEIFADPR 222 (244)
T ss_dssp THHHHHSTT
T ss_pred CHHHHHCCC
T ss_conf 299997179
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.89 E-value=5.5e-11 Score=83.48 Aligned_cols=164 Identities=12% Similarity=0.077 Sum_probs=81.2
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCEEECCCCE
Q ss_conf 91999926876589988999888501121029896699999985319994599992899678998411039369801857
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGM 547 (814)
Q Consensus 468 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~~l~liaehG~ 547 (814)
.+|++||+||||++. .++++++..|..++++|||+......++.. .+.+..++|.
T Consensus 2 mkli~fDlDGTLl~e------------------------~~~~~a~~~Gi~~~~~tgR~~~~~~~~~~~-~v~ll~~~~~ 56 (206)
T d1rkua_ 2 MEIACLDLEGVLVPE------------------------IWIAFAEKTGIDALKATTRDIPDYDVLMKQ-RLRILDEHGL 56 (206)
T ss_dssp CEEEEEESBTTTBCC------------------------HHHHHHHHHTCGGGGCCTTTCCCHHHHHHH-HHHHHHHTTC
T ss_pred CEEEEECCCCCHHHH------------------------HHHHHHHHCCCHHHHHHCCCCCCHHHHHHH-HHHHHHHCCC
T ss_conf 579998686551999------------------------999999985989899877999888999999-9999971787
Q ss_pred EEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99828982001265547957898899999997605998133202633899702577133377799999998129989996
Q 003508 548 FLRCTTGKWMTTMPEHLNMEWVDSLKHVFEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNAS 627 (814)
Q Consensus 548 ~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~~~~~~~Gs~iE~K~~~i~~hyr~ad~e~~~~~a~el~~~l~~~~~~~~~ 627 (814)
....-...+.... ... ........... +... ..+.-.+.. ........+ .. ....
T Consensus 57 ~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~---~~~~----~~~s~~~~~--------~~~~~~~~~-~~--~~~~ 111 (206)
T d1rkua_ 57 KLGDIQEVIATLK--PLE-----GAVEFVDWLRE---RFQV----VILSDTFYE--------FSQPLMRQL-GF--PTLL 111 (206)
T ss_dssp CHHHHHHHHTTCC--CCT-----THHHHHHHHHT---TSEE----EEEEEEEHH--------HHHHHHHHT-TC--CCEE
T ss_pred CEEHHHHHHHHCC--CCC-----HHHHHHHHHHC---CCEE----EEECCCCHH--------HHHHHHHHH-CC--CHHH
T ss_conf 3003565542025--562-----48899988604---7468----885167138--------888999984-78--3333
Q ss_pred EEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 4999949199999789999999999999834156589997559998179999599997636
Q 003508 628 VEVVQGSKSVEVRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 628 ~~v~~g~~~vEI~p~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~ 688 (814)
.............+....|+...+.+++.++ .+.+.++|||| +.||.+||+.++
T Consensus 112 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------i~~~eviaiGD-g~NDi~Ml~~Ag 165 (206)
T d1rkua_ 112 CHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK------SLYYRVIAAGD-SYNDTTMLSEAH 165 (206)
T ss_dssp EEEEEECTTSCEEEEECCSSSHHHHHHHHHH------HTTCEEEEEEC-SSTTHHHHHHSS
T ss_pred CCEEEEECCCCCCCCCCCCHHHHHHHHHHHC------CCCCCEEEECC-CCCCHHHHHHCC
T ss_conf 1102562144454321120145788999864------25652188438-732799998589
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=98.29 E-value=4.7e-07 Score=59.06 Aligned_cols=59 Identities=15% Similarity=0.178 Sum_probs=44.2
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEC---CCCHHHHHHHHCCCCCEE
Q ss_conf 691999926876589988999888501121029896699999985319994599992---899678998411039369
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNLWL 541 (814)
Q Consensus 467 ~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvS---GR~~~~L~~~~~~~~l~l 541 (814)
+.++++||+||||.+.. . +-+.+.++|++|.+ .+.+++++| +|+...+.+.+...++.+
T Consensus 6 ~ik~vlFDlDGTL~~~~-------------~--~i~~a~e~l~~l~~-~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~ 67 (261)
T d1vjra_ 6 KIELFILDMDGTFYLDD-------------S--LLPGSLEFLETLKE-KNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 67 (261)
T ss_dssp GCCEEEECCBTTTEETT-------------E--ECTTHHHHHHHHHH-TTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred HCCEEEEECCCEEEECC-------------C--CCCHHHHHHHHHHH-CCCCEEEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf 49999995988568799-------------1--68319999999997-699889995899999899999998523566
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.10 E-value=3.1e-06 Score=53.99 Aligned_cols=53 Identities=8% Similarity=0.153 Sum_probs=39.7
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEC---CCCHHHHHHHHCC
Q ss_conf 91999926876589988999888501121029896699999985319994599992---8996789984110
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQE 536 (814)
Q Consensus 468 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvS---GR~~~~L~~~~~~ 536 (814)
.++++||+||||.+. ...+ +.+.++|++|.+ .|.+++++| +|+...+.+.+..
T Consensus 2 yk~v~fDlDGTL~~~--------------~~~i-~~a~~~i~~l~~-~g~~~~~~Tn~s~~~~~~~~~~L~~ 57 (253)
T d1yv9a1 2 YQGYLIDLDGTIYLG--------------KEPI-PAGKRFVERLQE-KDLPFLFVTNNTTKSPETVAQRLAN 57 (253)
T ss_dssp CCEEEECCBTTTEET--------------TEEC-HHHHHHHHHHHH-TTCCEEEEECCCSSCHHHHHHHHHH
T ss_pred CCEEEECCCCCCEEC--------------CCCC-CCHHHHHHHHHH-CCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 899999088800829--------------9758-019999999997-7997899808999998999988898
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.03 E-value=2e-06 Score=55.08 Aligned_cols=39 Identities=15% Similarity=0.277 Sum_probs=32.3
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 9999999999999834156589997559998179999599997636
Q 003508 643 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 643 ~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~ 688 (814)
+.+|+.++..+++.++ .+++.++++|| +.+|..|++.++
T Consensus 143 ~~~k~~~~~~~~~~~~------~~~~~~i~iGD-s~~Dl~~a~~A~ 181 (226)
T d2feaa1 143 SNQCGCCKPSVIHELS------EPNQYIIMIGD-SVTDVEAAKLSD 181 (226)
T ss_dssp CSCCSSCHHHHHHHHC------CTTCEEEEEEC-CGGGHHHHHTCS
T ss_pred CCCCHHHHHHHHHHHC------CCCCEEEEEEC-CHHHHHHHHHCC
T ss_conf 5678999999999846------78863899807-631399999889
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=97.99 E-value=5.2e-06 Score=52.56 Aligned_cols=57 Identities=14% Similarity=0.220 Sum_probs=44.0
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEC---CCCHHHHHHHHCCCCC
Q ss_conf 691999926876589988999888501121029896699999985319994599992---8996789984110393
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKNFQEYNL 539 (814)
Q Consensus 467 ~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvS---GR~~~~L~~~~~~~~l 539 (814)
+.++++||+||||.+. .. .+ +.+.++|+.|.+ .|..|+++| +|+...+.+.+..+++
T Consensus 2 ~ik~VifDlDGTL~~~-------------~~-~i-~~a~e~i~~l~~-~g~~~~~~TN~~~~~~~~~~~~l~~~G~ 61 (250)
T d2c4na1 2 TIKNVICDIDGVLMHD-------------NV-AV-PGAAEFLHGIMD-KGLPLVLLTNYPSQTGQDLANRFATAGV 61 (250)
T ss_dssp CCCEEEEECBTTTEET-------------TE-EC-TTHHHHHHHHHH-TTCCEEEEESCCSCCHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCEEEEC-------------CC-CC-CCHHHHHHHHHH-CCCCEEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 8879999799801879-------------98-58-209999999997-7995899928999999999888763035
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.96 E-value=1.4e-05 Score=49.86 Aligned_cols=60 Identities=15% Similarity=0.129 Sum_probs=44.9
Q ss_pred HCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCH
Q ss_conf 116919999268765899889998885011210298966999999853199945999928996
Q 003508 465 RSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 527 (814)
Q Consensus 465 ~s~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~ 527 (814)
.++.+.++||+||||++...........+ ....+-|.+++.|+.|.+ .|..++++|||+.
T Consensus 4 ~~kpk~vifDiDgTL~~~~~~~~~~~~~~--~~~~~~p~v~~~l~~l~~-~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 4 PGKPKAVIFDVDGTLAKMNGRGPYDLEKC--DTDVINPMVVELSKMYAL-MGYQIVVVSGRES 63 (149)
T ss_dssp TTSCEEEEEETBTTTBCCSSCCTTCGGGG--GGCCBCHHHHHHHHHHHH-TTCEEEEEECSCC
T ss_pred CCCCCEEEEECCCCCEECCCCCCCCCCCC--CCCCCCHHHHHHHHHHHH-CCCEEEEEECCCH
T ss_conf 99996899974888382789875773330--408448789999999984-4480899926857
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.95 E-value=2.8e-05 Score=48.02 Aligned_cols=37 Identities=16% Similarity=0.202 Sum_probs=29.8
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 9999999999999834156589997559998179999599997636
Q 003508 643 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 643 ~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~ 688 (814)
+..|+.+++.+.+..+ ++.++++|| +.||..|++.++
T Consensus 151 ~~~K~~~v~~~~~~~~--------~~~~~~vGD-s~~Di~~~~~ag 187 (217)
T d1nnla_ 151 SGGKGKVIKLLKEKFH--------FKKIIMIGD-GATDMEACPPAD 187 (217)
T ss_dssp TTHHHHHHHHHHHHHC--------CSCEEEEES-SHHHHTTTTTSS
T ss_pred CCHHHHHHHHHHHCCC--------CCCCEEEEE-CHHHHHHHHHCC
T ss_conf 2208999999986348--------666389971-786599898689
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=97.60 E-value=2.9e-05 Score=47.91 Aligned_cols=53 Identities=6% Similarity=0.130 Sum_probs=40.7
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECC---CCHHHHHHHHCC
Q ss_conf 919999268765899889998885011210298966999999853199945999928---996789984110
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKNFQE 536 (814)
Q Consensus 468 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSG---R~~~~L~~~~~~ 536 (814)
.+.++||+||||.+. .. +-+.+.++|+.|.+ .+..++++|+ |+...+.+.+..
T Consensus 2 yk~vlFDlDGTL~~~--------------~~-~i~~a~e~l~~l~~-~g~~~~~~TN~s~~~~~~~~~~l~~ 57 (253)
T d1wvia_ 2 YKGYLIDLDGTIYKG--------------KD-RIPAGEDFVKRLQE-RQLPYILVTNNTTRTPEMVQEMLAT 57 (253)
T ss_dssp CCEEEEECBTTTEET--------------TE-ECHHHHHHHHHHHH-HTCCEEEEECCCSSCHHHHHHHHHH
T ss_pred CCEEEECCCCCEEEC--------------CC-CCCCHHHHHHHHHH-CCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 699999286820889--------------98-38149999999997-7997899948998999999999986
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.36 E-value=0.00018 Score=43.04 Aligned_cols=59 Identities=20% Similarity=0.236 Sum_probs=44.4
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHH---HHHCCCCC
Q ss_conf 99992687658998899988850112102989669999998531999459999289967899---84110393
Q 003508 470 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD---KNFQEYNL 539 (814)
Q Consensus 470 Li~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~---~~~~~~~l 539 (814)
-|++|+||||+... .+ ...+|-+.+++.|++|.+ .|+.+.|.|+|+..... .|+..-++
T Consensus 2 ti~vDiDGTl~~~~-~~---------~~~kPi~~~Ie~l~~L~~-~G~~IIi~TaR~~~~~~~t~~wL~~~~i 63 (122)
T d2obba1 2 TIAVDFDGTIVEHR-YP---------RIGEEIPFAVETLKLLQQ-EKHRLILWSVREGELLDEAIEWCRARGL 63 (122)
T ss_dssp EEEECCBTTTBCSC-TT---------SCCCBCTTHHHHHHHHHH-TTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred EEEEECCCCCCCCC-CC---------CCCCCCHHHHHHHHHHHH-CCCEEEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 89997579708899-97---------636645999999999998-7996999935888653889999998199
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.31 E-value=0.00031 Score=41.49 Aligned_cols=48 Identities=19% Similarity=0.228 Sum_probs=39.9
Q ss_pred EEEEEECCCCCCCCCC-CCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf 1999926876589988-999888501121029896699999985319994599992899
Q 003508 469 RLLILGFNATLTEPVD-TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 526 (814)
Q Consensus 469 rLi~lD~DGTL~~~~~-~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~ 526 (814)
+-|++|+||||+.... ++ ..+.|-+.+++.|..|.+ .|+.+.|.|+|.
T Consensus 2 K~i~~DiDGTI~~~~~~~y---------~~~~P~~~~Ie~l~~l~~-~G~~Iii~TaR~ 50 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDY---------RNVLPRLDVIEQLREYHQ-LGFEIVISTARN 50 (124)
T ss_dssp CEEEECSTTTTBCCCCSCG---------GGCCBCHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CEEEEECCCCEECCCCCCC---------CCCCCCHHHHHHHHHHHH-CCCEEEEEECCC
T ss_conf 9999937887288999982---------736848999999999998-799899995687
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=96.96 E-value=0.00066 Score=39.47 Aligned_cols=56 Identities=18% Similarity=0.267 Sum_probs=40.5
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf 691999926876589988999888501121029896699999985319994599992899
Q 003508 467 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 526 (814)
Q Consensus 467 ~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~ 526 (814)
.++++|||.||||........ ..... +...+-|.+.++|+.|.+ .|..++|+|..+
T Consensus 1 ~~K~i~~D~DGtL~~~~~~~~-~~~~~--~~~~~~pgv~e~L~~L~~-~g~~l~i~TNq~ 56 (161)
T d2fpwa1 1 SQKYLFIDRDGTLISEPPSDF-QVDRF--DKLAFEPGVIPQLLKLQK-AGYKLVMITNQD 56 (161)
T ss_dssp CCEEEEECCBTTTBCCC--CC-CCCSG--GGCCBCTTHHHHHHHHHH-TTEEEEEEEECT
T ss_pred CCCEEEEECCCCEEEECCCCC-CCCCH--HHCEECCCHHHHHHHHHH-CCCCEEEECCCC
T ss_conf 981999918897673579887-42888--990687559999999987-387301104643
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=96.82 E-value=0.0012 Score=37.98 Aligned_cols=44 Identities=14% Similarity=0.041 Sum_probs=37.9
Q ss_pred EEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCC
Q ss_conf 997899999999999998341565899975599981799995999976367
Q 003508 639 VRAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 639 I~p~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~~ 689 (814)
+.....+|..+++.+++.++ .+++.++|+|| |.||.+||+.++.
T Consensus 74 ~~~~~~~K~~~l~~~~~~~~------i~~~~v~~vGD-d~nDl~~l~~~g~ 117 (177)
T d1k1ea_ 74 FFLGKLEKETACFDLMKQAG------VTAEQTAYIGD-DSVDLPAFAACGT 117 (177)
T ss_dssp EEESCSCHHHHHHHHHHHHT------CCGGGEEEEEC-SGGGHHHHHHSSE
T ss_pred CCCCCCCHHHHHHHHHHHHC------CCCCEEEEECC-CCCHHHHHHHCCE
T ss_conf 11013638889999999866------77522577058-8407899966892
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.80 E-value=0.0015 Score=37.33 Aligned_cols=34 Identities=6% Similarity=0.002 Sum_probs=25.5
Q ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHH
Q ss_conf 99999999999983415658999755999817999959999
Q 003508 644 VTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVY 684 (814)
Q Consensus 644 ~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF 684 (814)
-.|...+..+++.++ .+++.+++||| ...|..+=
T Consensus 98 kp~~~~~~~~~~~~~------~~~~~~l~igD-~~~di~aA 131 (164)
T d1u7pa_ 98 GSKVTHFERLHHKTG------VPFSQMVFFDD-ENRNIIDV 131 (164)
T ss_dssp SCHHHHHHHHHHHHC------CCGGGEEEEES-CHHHHHHH
T ss_pred CCCHHHHHHHHHHHC------CCHHHEEEECC-CHHHHHHH
T ss_conf 897699999999968------88699798748-78789999
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.58 E-value=0.00045 Score=40.51 Aligned_cols=43 Identities=12% Similarity=0.117 Sum_probs=36.3
Q ss_pred EECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCC
Q ss_conf 97899999999999998341565899975599981799995999976367
Q 003508 640 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 640 ~p~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~~ 689 (814)
...+..|+.++..+++.++ .+++.+++||| +.||.+||++++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~------~~~~~~i~iGD-s~nDi~m~~~ag~ 179 (210)
T d1j97a_ 137 VLKENAKGEILEKIAKIEG------INLEDTVAVGD-GANDISMFKKAGL 179 (210)
T ss_dssp SCSTTHHHHHHHHHHHHHT------CCGGGEEEEES-SGGGHHHHHHCSE
T ss_pred CCCCCCCCCHHHHHHHHHC------CCCCCEEEECC-CCCHHHHHHHCCC
T ss_conf 1112345410335788846------66554178637-8474999998898
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.53 E-value=0.0025 Score=35.91 Aligned_cols=53 Identities=11% Similarity=0.122 Sum_probs=40.7
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCH
Q ss_conf 919999268765899889998885011210298966999999853199945999928996
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 527 (814)
Q Consensus 468 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~ 527 (814)
.+++|||.||||........ +. +..++-|.+.++|+.|.+ .|..++|+|..+.
T Consensus 2 ~~Av~~DrDGtl~~~~~y~~----~~--~~~~~~~gv~e~l~~L~~-~g~~~~ivTNq~~ 54 (182)
T d2gmwa1 2 VPAIFLDRDGTINVDHGYVH----EI--DNFEFIDGVIDAMRELKK-MGFALVVVTNQSG 54 (182)
T ss_dssp BCEEEECSBTTTBCCCSSCC----SG--GGCCBCTTHHHHHHHHHH-TTCEEEEEEECTH
T ss_pred CCEEEEECCCCCCCCCCCCC----CH--HHEEECCCHHHHHHHHHH-CCCHHHHHHCCCH
T ss_conf 98899948998548899899----88--993688789999999866-1841666642202
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=96.33 E-value=0.0032 Score=35.21 Aligned_cols=23 Identities=17% Similarity=0.203 Sum_probs=18.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 76334323895799999999651
Q 003508 780 RTNARFLLQSSDEVVSFLKKLAD 802 (814)
Q Consensus 780 ~t~A~~~l~~~~~v~~~L~~l~~ 802 (814)
+..|.+.+++..|+.++|..|.+
T Consensus 206 ~~~ad~vi~~~~el~~~l~~l~~ 228 (228)
T d2hcfa1 206 RHKPGTLFKNFAETDEVLASILT 228 (228)
T ss_dssp TTCCSEEESCSCCHHHHHHHHHC
T ss_pred HCCCCEEECCHHHHHHHHHHHHC
T ss_conf 58999998999999999999719
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=96.23 E-value=0.0025 Score=35.92 Aligned_cols=54 Identities=19% Similarity=0.304 Sum_probs=40.7
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf 1691999926876589988999888501121029896699999985319994599992899
Q 003508 466 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 526 (814)
Q Consensus 466 s~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~ 526 (814)
.+..+||||.||||....+.+. .. .+.++-|.+.++|++|.+ .|..++|+|.++
T Consensus 21 ~~~~Aif~DrDGtl~~~~~y~~----~~--~~~~l~pgv~e~L~~L~~-~G~~l~IvTNQ~ 74 (209)
T d2o2xa1 21 PHLPALFLDRDGTINVDTDYPS----DP--AEIVLRPQMLPAIATANR-AGIPVVVVTNQS 74 (209)
T ss_dssp SSCCCEEECSBTTTBCCCSCTT----CG--GGCCBCGGGHHHHHHHHH-HTCCEEEEEECH
T ss_pred CCCCEEEEECCCCEECCCCCCC----CH--HHEEECCCHHHHHHHHHH-HCCEEEEECCCC
T ss_conf 8797899959997478899999----99--992763448999999986-297579861654
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=95.75 E-value=0.0059 Score=33.56 Aligned_cols=39 Identities=10% Similarity=-0.098 Sum_probs=30.1
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 9999999999999834156589997559998179999599997636
Q 003508 643 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 643 ~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~ 688 (814)
.-.|......+++.++ .+++.+++||| ..+|..+-+.++
T Consensus 150 ~kp~p~~~~~~~~~~~------~~~~~~~~igD-~~~Di~~A~~aG 188 (224)
T d2hsza1 150 IKPHPAPFYYLCGKFG------LYPKQILFVGD-SQNDIFAAHSAG 188 (224)
T ss_dssp CTTSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHH------HHHHCCCHHCC-CHHHHHHHHHCC
T ss_conf 4321013578998864------31100202117-698999999909
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=95.55 E-value=0.02 Score=30.27 Aligned_cols=36 Identities=3% Similarity=-0.238 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 9999999999834156589997559998179999599997636
Q 003508 646 KGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 646 KG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~ 688 (814)
+....+.+++.++ .+++.+++||| ..+|..|=+.++
T Consensus 146 ~~~~~~~~~~~l~------~~~~~~l~igD-~~~di~aA~~~G 181 (218)
T d1te2a_ 146 HPQVYLDCAAKLG------VDPLTCVALED-SVNGMIASKAAR 181 (218)
T ss_dssp STHHHHHHHHHHT------SCGGGEEEEES-SHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCC------CCCHHCEEEEE-CHHHHHHHHHCC
T ss_conf 5789999999729------99513089960-989999999839
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=95.48 E-value=0.057 Score=27.46 Aligned_cols=102 Identities=11% Similarity=0.028 Sum_probs=61.9
Q ss_pred ECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCC--------CCCC--CCCEEEECCC-
Q ss_conf 4688998899999986668998789766881488776603699843999188781--------0003--8963998999-
Q 003508 321 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA--------AQSL--GAGAILVNPW- 389 (814)
Q Consensus 321 ~~~~i~~~el~aly~~ADv~v~tS~~EG~~Lv~lEama~~~~~~g~lVlS~~~G~--------~~~l--g~~~~lvnP~- 389 (814)
+.+++++.+ ++..+|+||..+- . .+..|+|++| .|+|+.-..+- ++.+ ...|+.+++.
T Consensus 274 i~~~~p~~~---ll~~a~~~v~hgG---~-~t~~Eal~~G----~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~ 342 (391)
T d1pn3a_ 274 VVGEVNLQE---LFGRVAAAIHHDS---A-GTTLLAMRAG----IPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPV 342 (391)
T ss_dssp EESSCCHHH---HHTTSSCEEEESC---H-HHHHHHHHHT----CCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSS
T ss_pred EECCCCHHH---HHHHCCEEEECCC---H-HHHHHHHHHC----CCEEEECCCCCCCCHHHHHHHHHHHCCCEEECCCCC
T ss_conf 954468799---9842548985274---3-7999999828----868993355677452999999999879889768578
Q ss_pred -CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf -99999999999944999999999998857998739999999999999
Q 003508 390 -NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 436 (814)
Q Consensus 390 -d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~l 436 (814)
+.++++++|.++|+.+. +++..++.+.++.....+-++.+.+.+
T Consensus 343 ~~~~~l~~~i~~~l~~~~---r~~a~~~a~~~~~~g~~~aa~~i~~~l 387 (391)
T d1pn3a_ 343 PTIDSLSAALDTALAPEI---RARATTVADTIRADGTTVAAQLLFDAV 387 (391)
T ss_dssp CCHHHHHHHHHHHTSTTH---HHHHHHHGGGSCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHCHHH---HHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 999999999999839999---999999999988527999999999998
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.26 E-value=0.0092 Score=32.38 Aligned_cols=37 Identities=19% Similarity=0.123 Sum_probs=28.2
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 99999999999834156589997559998179999599997636
Q 003508 645 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 645 nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~ 688 (814)
-+...++.+++.++ .+++.++++|| ..+|..+=+.++
T Consensus 138 P~p~~~~~~~~~~~------~~~~~~l~VgD-s~~Di~~a~~aG 174 (207)
T d2hdoa1 138 PDPLPLLTALEKVN------VAPQNALFIGD-SVSDEQTAQAAN 174 (207)
T ss_dssp TSSHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHT
T ss_pred HHHHHHCCCCCCEE------EECCCEEEECC-CHHHHHHHHHCC
T ss_conf 34443002342104------51134068547-787899999849
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.14 E-value=0.0082 Score=32.68 Aligned_cols=57 Identities=12% Similarity=0.216 Sum_probs=38.1
Q ss_pred HCCCEEEEEECCCCCCCCCC-CCCCCCCCHHHHC-CCCCHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf 11691999926876589988-9998885011210-29896699999985319994599992899
Q 003508 465 RSNNRLLILGFNATLTEPVD-TPGRRGDQIREME-LKLHPDLKQPLNALCHDPKTTIVVLSGSD 526 (814)
Q Consensus 465 ~s~~rLi~lD~DGTL~~~~~-~p~~~~~~~~~~~-~~~~~~~~~~L~~L~~~~~~~V~IvSGR~ 526 (814)
....++++||.||||..... .+ ..... .+ ..+.+.+.++|+.|.+ .|..++|||.-+
T Consensus 18 ~~~~Kia~fDrDGtLik~~~~~~--~~~~~--~d~~~l~~~v~~~i~~L~~-~gy~iiIvTNQ~ 76 (195)
T d1yj5a1 18 KPQGKVAAFDLDGTLITTRSGKV--FPTSP--SDWRILYPEIPKKLQELAA-EGYKLVIFTNQM 76 (195)
T ss_dssp CCCSCEEEECSBTTTEECSSSCS--SCSST--TCCEESCTTHHHHHHHHHH-HTCEEEEEEECH
T ss_pred CCCCCEEEEECCCCEEEECCCCC--CCCCH--HHCEECCCCHHHHHHHHHH-CCCEEEEECCCC
T ss_conf 87680899978995175489986--78984--6634516779999999986-784799952763
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=95.07 E-value=0.076 Score=26.66 Aligned_cols=246 Identities=15% Similarity=0.111 Sum_probs=139.6
Q ss_pred HHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHCCCCCCHHHHHHHH--HCCEEEEECHHHHHH
Q ss_conf 998748999899991965015999999618998199798158995444504988579999976--244775713888999
Q 003508 101 VVNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARH 178 (814)
Q Consensus 101 ~i~~~~~~~DiI~ihdyhl~llp~~lr~~~~~~~i~~f~H~Pfp~~e~fr~lp~~~~il~~ll--~aD~I~f~~~~~~~~ 178 (814)
++.+..+| |+|.|+.-..-.++..+.....+.||++ +|--..+.++.. +..++..|... .+++-...+..+.++
T Consensus 82 ~~l~~~kP-D~vlv~GDr~e~la~a~aa~~~~ipi~H-iegG~rsg~~~~--~~~de~~R~~iskls~~hf~~t~~~~~~ 157 (373)
T d1v4va_ 82 RALKEMGA-DYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKAN 157 (373)
T ss_dssp HHHHHTTC-SEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred HHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHEE-ECCCCCCCCCCC--CCCHHHHHHHHCCCCCEEEECCHHHHHH
T ss_conf 66640376-4001113675310377889876212224-134345543356--7616666655223443255122156666
Q ss_pred HHHHHHHHHCCCCCCCCEEECCEEEEEEEE-ECCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHH
Q ss_conf 999999883753589923528937899996-1356925665661399149999999999289819999305444689789
Q 003508 179 FVSACTRILGFEGTPEGVEDQGRLTRVAAF-PIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQ 257 (814)
Q Consensus 179 Fl~~~~~~l~~~~~~~~i~~~g~~~~v~v~-p~GId~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRl~~~KGi~~ 257 (814)
+++ .|.+ ..+|.++ -.++|. +..... ..........++.+++..-|....+....
T Consensus 158 L~~-----~Ge~-----------~~~I~~vG~p~~D~--i~~~~~------~~~~~~~~~~~~~~lvt~hr~~n~~~~~~ 213 (373)
T d1v4va_ 158 LLK-----EGKR-----------EEGILVTGQTGVDA--VLLAAK------LGRLPEGLPEGPYVTVTMHRRENWPLLSD 213 (373)
T ss_dssp HHT-----TTCC-----------GGGEEECCCHHHHH--HHHHHH------HCCCCTTCCSSCEEEECCCCGGGGGGHHH
T ss_pred HHH-----HCCC-----------CCCEEECCCCHHHH--HHHHHH------HCCCCCCCCCCCCEEEEECCCCCCCHHHH
T ss_conf 666-----3045-----------42134426621557--776543------11000223445531688426555312789
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHC
Q ss_conf 99999998986846658667999963999993789999999999999850345988843389946889988999999866
Q 003508 258 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 337 (814)
Q Consensus 258 ~l~A~~~ll~~~P~~~~~v~Lv~i~~p~~~~~~~y~~l~~~l~~lv~~iN~~~g~~~~~~v~~~~~~i~~~el~aly~~A 337 (814)
.+.++..+.+..++. .++... +. . +. ....+.+. ++ . ...+. +...+++.++..+++.|
T Consensus 214 ~~~~~~~~~~~~~~~----~~i~p~-~~--~-~~---~~~~~~~~---~~-~-----~~n~~-~~~~l~~~~~l~ll~~s 272 (373)
T d1v4va_ 214 LAQALKRVAEAFPHL----TFVYPV-HL--N-PV---VREAVFPV---LK-G-----VRNFV-LLDPLEYGSMAALMRAS 272 (373)
T ss_dssp HHHHHHHHHHHCTTS----EEEEEC-CS--C-HH---HHHHHHHH---HT-T-----CTTEE-EECCCCHHHHHHHHHTE
T ss_pred HHHHHHHHHHHCCCC----EEEEEE-CC--C-CC---CHHHHHHH---HC-C-----CCCCE-EECCCHHHHHHHHHHHC
T ss_conf 999999986533565----035640-34--2-22---10355554---30-3-----33200-11100078888876430
Q ss_pred CEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCC-CCCC-EEEECCCCHHHHHHHHHHHHCCC
Q ss_conf 68998789766881488776603699843999188781000-3896-39989999999999999994499
Q 003508 338 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-LGAG-AILVNPWNITEVANAIARALNMS 405 (814)
Q Consensus 338 Dv~v~tS~~EG~~Lv~lEama~~~~~~g~lVlS~~~G~~~~-lg~~-~~lvnP~d~~~lA~ai~~~L~~~ 405 (814)
++.+-.| +-...||.+.+ .|+|.-...|-.+. +..+ .++| +.|.+++..+|..+|..+
T Consensus 273 ~~vignS-----ssgi~Ea~~lg----~P~Inir~~~eRqeg~~~g~nvlv-~~d~~~I~~~i~~~l~~~ 332 (373)
T d1v4va_ 273 LLLVTDS-----GGLQEEGAALG----VPVVVLRNVTERPEGLKAGILKLA-GTDPEGVYRVVKGLLENP 332 (373)
T ss_dssp EEEEESC-----HHHHHHHHHTT----CCEEECSSSCSCHHHHHHTSEEEC-CSCHHHHHHHHHHHHTCH
T ss_pred EEEECCC-----CHHHHCCHHHC----CCEEEECCCCCCHHHHHCCEEEEC-CCCHHHHHHHHHHHHCCH
T ss_conf 1685064-----12222003205----868984887669878962904975-899999999999997198
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=95.00 E-value=0.015 Score=31.14 Aligned_cols=69 Identities=17% Similarity=0.226 Sum_probs=47.0
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCC
Q ss_conf 16919999268765899889998885011210298966999999853199945999928996789984110393
Q 003508 466 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 539 (814)
Q Consensus 466 s~~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~~l 539 (814)
.+-++|++|+||+|++-.-.- ..... ........--.+|..|.. .+..++++||+...........+++
T Consensus 3 ~~ik~~i~DvDGVlTDG~v~~---~~dG~-e~k~F~~~Dg~gi~~l~~-~gi~~~iis~~~~~~v~~~~~~l~~ 71 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDGQLHY---DANGE-AIKSFHVRDGLGIKMLMD-ADIQVAVLSGRDSPILRRRIADLGI 71 (177)
T ss_dssp GGCCEEEEECTTTTSCSEEEE---ETTEE-EEEEEEHHHHHHHHHHHH-TTCEEEEEESCCCHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCCCCCEEEE---ECCCC-EEEEEECCCHHHHHHHHH-HCEEEEEECCCCHHHHHHHHHHHCC
T ss_conf 237199981677506886999---38997-999997760488878765-2178999669844678998763212
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=94.44 E-value=0.085 Score=26.36 Aligned_cols=103 Identities=14% Similarity=0.044 Sum_probs=63.8
Q ss_pred EEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCC----CCCCC--CCCEEEECCC--
Q ss_conf 899468899889999998666899878976688148877660369984399918878----10003--8963998999--
Q 003508 318 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 389 (814)
Q Consensus 318 v~~~~~~i~~~el~aly~~ADv~v~tS~~EG~~Lv~lEama~~~~~~g~lVlS~~~G----~~~~l--g~~~~lvnP~-- 389 (814)
+. +.+++++.++ +..+|+||. .|-..+..|+++++ .|+|+.-..+ .+..+ ...|+.+++.
T Consensus 288 v~-~~~~~p~~~l---l~~~~~~I~----hgG~~t~~Eal~~G----vP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~ 355 (401)
T d1rrva_ 288 CF-AIDEVNFQAL---FRRVAAVIH----HGSAGTEHVATRAG----VPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTP 355 (401)
T ss_dssp EE-EESSCCHHHH---GGGSSEEEE----CCCHHHHHHHHHHT----CCEEECCCSBTHHHHHHHHHHHTSEEECSSSCC
T ss_pred EE-EEECCCCHHH---HHHCCEEEE----CCCCHHHHHHHHHC----CCEEEECCCCCHHHHHHHHHHCCCEEECCCCCC
T ss_conf 89-9731481777---621248886----17724899999839----998980661208999999998798897574789
Q ss_pred CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 9999999999994499999999999885799873999999999999
Q 003508 390 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSE 435 (814)
Q Consensus 390 d~~~lA~ai~~~L~~~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~ 435 (814)
+.+.++++|.++|+ + +.+++..+..+.+.......-++..++.
T Consensus 356 ~~~~L~~ai~~vl~--~-~~r~~a~~~~~~~~~~g~~~aa~~ie~~ 398 (401)
T d1rrva_ 356 TFESLSAALTTVLA--P-ETRARAEAVAGMVLTDGAAAAADLVLAA 398 (401)
T ss_dssp CHHHHHHHHHHHTS--H-HHHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHC--H-HHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 99999999999849--7-9999999999987551799999999998
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=94.16 E-value=0.13 Score=25.31 Aligned_cols=149 Identities=15% Similarity=0.140 Sum_probs=101.0
Q ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHH---HHHCCCC-CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 981999930544468978999999998---9868466-586679999639999937899999999999998503459888
Q 003508 239 GRKVMLGVDRLDMIKGIPQKLLAFEKF---LEENSDW-RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 314 (814)
Q Consensus 239 ~~~iIl~VgRl~~~KGi~~~l~A~~~l---l~~~P~~-~~~v~Lv~i~~p~~~~~~~y~~l~~~l~~lv~~iN~~~g~~~ 314 (814)
+..++.++-|+..-|-..+.+.-..++ +...|+. +..+++|..|.+..++.+. +++-..+.+++..+|..=-..+
T Consensus 525 ~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~g-K~iIk~I~~va~~in~dp~~~~ 603 (796)
T d1l5wa_ 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLA-KNIIFAINKVADVINNDPLVGD 603 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHH-HHHHHHHHHHHHHHHTCTTTGG
T ss_pred HHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHH-HHHHHHHHHHHHHHCCCHHHCC
T ss_conf 651403434544431453035359999999850864577865999748889831789-9999999999998617855436
Q ss_pred CCCEEEECCCCCHHHHHHHHHHCCEEEECCC--CCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCC-----CCCEEEEC
Q ss_conf 4338994688998899999986668998789--7668814887766036998439991887810003-----89639989
Q 003508 315 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVN 387 (814)
Q Consensus 315 ~~~v~~~~~~i~~~el~aly~~ADv~v~tS~--~EG~~Lv~lEama~~~~~~g~lVlS~~~G~~~~l-----g~~~~lvn 387 (814)
...|+|+ ...+-..--.+...+||.+-+|. .|.-|..-+-||.- |.+.+|..-|.--++ +++++.+-
T Consensus 604 ~~kVVFl-enYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalN-----G~lnlstlDGw~vE~~~~vg~eN~f~fG 677 (796)
T d1l5wa_ 604 KLKVVFL-PDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp GEEEEEC-SSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred CEEEEEE-CCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHC-----CCEEEECCCCHHHHHHHHCCCCCEEEEC
T ss_conf 3338980-787568999874401265409998734578267799985-----9716604664479888863745368806
Q ss_pred CCCHHHHH
Q ss_conf 99999999
Q 003508 388 PWNITEVA 395 (814)
Q Consensus 388 P~d~~~lA 395 (814)
. +.+++.
T Consensus 678 ~-~~~ev~ 684 (796)
T d1l5wa_ 678 H-TVEQVK 684 (796)
T ss_dssp C-CHHHHH
T ss_pred C-CHHHHH
T ss_conf 8-667778
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=93.96 E-value=0.026 Score=29.52 Aligned_cols=37 Identities=16% Similarity=0.051 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 99999999999834156589997559998179999599997636
Q 003508 645 TKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 645 nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~ 688 (814)
.+...++.+++.++ .+++.+++||| ..+|..+-+.++
T Consensus 138 p~~~~~~~~~~~~~------~~p~~~l~VgD-~~~Di~~A~~~G 174 (204)
T d2go7a1 138 PSPEAATYLLDKYQ------LNSDNTYYIGD-RTLDVEFAQNSG 174 (204)
T ss_dssp TSSHHHHHHHHHHT------CCGGGEEEEES-SHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC------CCCCEEEEEEC-CHHHHHHHHHCC
T ss_conf 25788899999829------99751899947-989999999869
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=93.58 E-value=0.13 Score=25.25 Aligned_cols=39 Identities=8% Similarity=0.129 Sum_probs=28.9
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 9999999999999834156589997559998179999599997636
Q 003508 643 GVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 643 ~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~ 688 (814)
+--+..+....++.++ .+++.+++||| ..+|..+=+.++
T Consensus 183 ~KP~p~~~~~~~~~~~------~~p~~~l~vgD-~~~dv~aA~~aG 221 (253)
T d1zs9a1 183 HKVESESYRKIADSIG------CSTNNILFLTD-VTREASAAEEAD 221 (253)
T ss_dssp CTTCHHHHHHHHHHHT------SCGGGEEEEES-CHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHC------CCCCCEEEEEC-CHHHHHHHHHCC
T ss_conf 5778088899999948------99674899947-999999999859
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=93.49 E-value=0.049 Score=27.84 Aligned_cols=33 Identities=15% Similarity=-0.004 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 999999999834156589997559998179999599997636
Q 003508 647 GAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 647 G~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~ 688 (814)
....+.+++.++ ++.+++||| ..+|..+-+.++
T Consensus 137 p~~~~~~~~~~~--------~~~~l~vgD-s~~Di~aA~~aG 169 (187)
T d2fi1a1 137 PESMLYLREKYQ--------ISSGLVIGD-RPIDIEAGQAAG 169 (187)
T ss_dssp CHHHHHHHHHTT--------CSSEEEEES-SHHHHHHHHHTT
T ss_pred HHHHHHHHHHCC--------CCCEEEEEC-CHHHHHHHHHCC
T ss_conf 999999999849--------997699907-999999999859
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.37 E-value=0.11 Score=25.59 Aligned_cols=15 Identities=13% Similarity=0.401 Sum_probs=11.5
Q ss_pred CEE-EEEECCCCCCCC
Q ss_conf 919-999268765899
Q 003508 468 NRL-LILGFNATLTEP 482 (814)
Q Consensus 468 ~rL-i~lD~DGTL~~~ 482 (814)
+++ |++|+||||++.
T Consensus 2 ~~mrI~iDmDGVL~Df 17 (195)
T d1q92a_ 2 RALRVLVDMDGVLADF 17 (195)
T ss_dssp CCEEEEECSBTTTBCH
T ss_pred CCCEEEEECCCCCCCC
T ss_conf 8509999799865067
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=93.18 E-value=0.036 Score=28.71 Aligned_cols=71 Identities=8% Similarity=-0.039 Sum_probs=45.4
Q ss_pred CHHHHHHHHHHCCCEEEEEECCCCCCCCCCC---------CCCC-----CCCH------HHHCCCCCHHHHHHHHHHHCC
Q ss_conf 7567999997116919999268765899889---------9988-----8501------121029896699999985319
Q 003508 455 READSIERYLRSNNRLLILGFNATLTEPVDT---------PGRR-----GDQI------REMELKLHPDLKQPLNALCHD 514 (814)
Q Consensus 455 ~~~~~~~~y~~s~~rLi~lD~DGTL~~~~~~---------p~~~-----~~~~------~~~~~~~~~~~~~~L~~L~~~ 514 (814)
.+.++.+.+...+...|+||+|=|+++..+. |+.. ...+ -+..+.+-|.+++.|+.+.+
T Consensus 22 ~~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~- 100 (209)
T d2b82a1 22 SVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR- 100 (209)
T ss_dssp CHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH-
T ss_pred EHHHHHHHCCCCCCCEEEECCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHH-
T ss_conf 7888887557999846897031443238388876654037676655678741387761244346766249999999997-
Q ss_pred CCCEEEEECCCC
Q ss_conf 994599992899
Q 003508 515 PKTTIVVLSGSD 526 (814)
Q Consensus 515 ~~~~V~IvSGR~ 526 (814)
.|..|+.||||+
T Consensus 101 ~Gv~IfyVTnR~ 112 (209)
T d2b82a1 101 RGDAIFFVTGRS 112 (209)
T ss_dssp HTCEEEEEECSC
T ss_pred CCCEEEEEECCC
T ss_conf 597499993884
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.75 E-value=0.19 Score=24.22 Aligned_cols=58 Identities=19% Similarity=0.211 Sum_probs=46.4
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCC
Q ss_conf 919999268765899889998885011210298966999999853199945999928996789984110393
Q 003508 468 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 539 (814)
Q Consensus 468 ~rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~~l 539 (814)
-..+++|.+|+++--..+ .+-+.+.++++.|.+ .|..++|+||............+++
T Consensus 3 ~~~~~~d~~~~~~~g~~D-------------~lr~~a~~~I~~L~~-~Gi~v~ilTGD~~~~a~~ia~~lgI 60 (135)
T d2b8ea1 3 VTAVIFDKTGTLTKGKPD-------------TLKESAKPAVQELKR-MGIKVGMITGDNWRSAEAISRELNL 60 (135)
T ss_dssp CCEEEEECCCCCBCSCCC-------------CBCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred EEEEEECCCEEEEEECCC-------------CCCCCHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHHHH
T ss_conf 899999891479973688-------------998119999999998-5997999758633555677765422
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=92.21 E-value=0.25 Score=23.44 Aligned_cols=75 Identities=12% Similarity=0.026 Sum_probs=52.9
Q ss_pred CEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEECCCC----CCCCC--CCCEEEECCC-
Q ss_conf 3899468899889999998666899878976688148877660369984399918878----10003--8963998999-
Q 003508 317 PIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW- 389 (814)
Q Consensus 317 ~v~~~~~~i~~~el~aly~~ADv~v~tS~~EG~~Lv~lEama~~~~~~g~lVlS~~~G----~~~~l--g~~~~lvnP~- 389 (814)
.++ +.+++++.+ +|..+|+||. -|-..+..|++++| .|+|+.-..+ .+..+ ...|+.+++.
T Consensus 286 nv~-~~~~~p~~~---~l~~~~~~V~----hgG~~t~~Eal~~G----vP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~ 353 (401)
T d1iira_ 286 DCF-AIGEVNHQV---LFGRVAAVIH----HGGAGTTHVAARAG----APQILLPQMADQPYYAGRVAELGVGVAHDGPI 353 (401)
T ss_dssp GEE-ECSSCCHHH---HGGGSSEEEE----CCCHHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSS
T ss_pred CEE-EEECCCHHH---HHHHCCEEEE----CCCCHHHHHHHHHC----CCEEECCCCCCHHHHHHHHHHCCCEEECCCCC
T ss_conf 789-970258799---9954589996----37716999999819----99998066141799999999879888768478
Q ss_pred -CHHHHHHHHHHHHC
Q ss_conf -99999999999944
Q 003508 390 -NITEVANAIARALN 403 (814)
Q Consensus 390 -d~~~lA~ai~~~L~ 403 (814)
++++++++|.++|+
T Consensus 354 ~~~~~l~~ai~~~l~ 368 (401)
T d1iira_ 354 PTFDSLSAALATALT 368 (401)
T ss_dssp CCHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHC
T ss_conf 999999999999969
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=92.12 E-value=0.22 Score=23.77 Aligned_cols=56 Identities=9% Similarity=0.144 Sum_probs=45.9
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCC
Q ss_conf 1999926876589988999888501121029896699999985319994599992899678998411039
Q 003508 469 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYN 538 (814)
Q Consensus 469 rLi~lD~DGTL~~~~~~p~~~~~~~~~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~~ 538 (814)
.++++|.+|||+-..-+| |-+.+.++|..|.+ .|..|+++||=...........++
T Consensus 3 ~~~~~d~~~~~~~~~~Dp-------------~R~~~~~~I~~l~~-~GI~v~miTGD~~~tA~~ia~~~G 58 (168)
T d1wpga2 3 SVICSDKTGTLTTNQLDP-------------PRKEVMGSIQLCRD-AGIRVIMITGDNKGTAIAICRRIG 58 (168)
T ss_dssp CEEEECCTTTTBCCCECC-------------BCTTHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHTT
T ss_pred EEEEECCCCEEEEEECCC-------------CCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHCC
T ss_conf 899978851788873488-------------96539999999998-849899989999799999999849
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=91.74 E-value=0.036 Score=28.67 Aligned_cols=16 Identities=25% Similarity=0.683 Sum_probs=14.0
Q ss_pred CCEEEEEECCCCCCCC
Q ss_conf 6919999268765899
Q 003508 467 NNRLLILGFNATLTEP 482 (814)
Q Consensus 467 ~~rLi~lD~DGTL~~~ 482 (814)
++|+++||+||||++.
T Consensus 3 kkKlv~FDlDGTL~d~ 18 (210)
T d1j97a_ 3 KKKLILFDFDSTLVNN 18 (210)
T ss_dssp CCCEEEECCCCCCBSS
T ss_pred CCEEEEEECCCCCCCC
T ss_conf 8759999688771791
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=91.38 E-value=0.31 Score=22.88 Aligned_cols=147 Identities=10% Similarity=0.080 Sum_probs=99.5
Q ss_pred CCEEEEEECCCCCCCCHHHHHHH----HHHHHHHCCCC-CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 98199993054446897899999----99989868466-58667999963999993789999999999999850345988
Q 003508 239 GRKVMLGVDRLDMIKGIPQKLLA----FEKFLEENSDW-RGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTL 313 (814)
Q Consensus 239 ~~~iIl~VgRl~~~KGi~~~l~A----~~~ll~~~P~~-~~~v~Lv~i~~p~~~~~~~y~~l~~~l~~lv~~iN~~~g~~ 313 (814)
+..++.++-|+..-|-..+.+.- +.++. +.|+. ...+++|..|....++.. -+++-..+.+++.-||..-...
T Consensus 549 ~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk-~~~~~~~~P~q~IFaGKAhP~d~~-gK~iIk~I~~va~~in~dp~~~ 626 (824)
T d2gj4a1 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIK-KEPNKFVVPRTVMIGGKAAPGYHM-AKMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHH-HCTTSCCCCEEEEEECCCCTTCHH-HHHHHHHHHHHHHHHTTCTTTG
T ss_pred CHHHHHHEEECHHHHHHHHHHHHHHHHHHHHH-HCCCCCCCCEEEEEECCCCCCCHH-HHHHHHHHHHHHHHHHCCHHHC
T ss_conf 41101310000233334566765899998765-345678887499980788976388-9999999999999874181121
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHCCEEEECCC--CCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCC-----CCCEEEE
Q ss_conf 84338994688998899999986668998789--7668814887766036998439991887810003-----8963998
Q 003508 314 TAVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILV 386 (814)
Q Consensus 314 ~~~~v~~~~~~i~~~el~aly~~ADv~v~tS~--~EG~~Lv~lEama~~~~~~g~lVlS~~~G~~~~l-----g~~~~lv 386 (814)
+...|+|+. ..+-..--.+...|||..-+|+ .|.=|..-+-||.- |.+.+|.--|.--++ +++++.+
T Consensus 627 ~~lkVvFle-nY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alN-----Gal~lstlDGwnvEi~~~vg~~N~~~f 700 (824)
T d2gj4a1 627 DRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN-----GALTIGTMDGANVEMAEEAGEENFFIF 700 (824)
T ss_dssp GGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEEC
T ss_pred CCEEEEECC-CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHC-----CCEEECCCCCHHHHHHHHCCCCCEEEE
T ss_conf 534488707-87669999751143441318999734577504589975-----983563566358999986475667981
Q ss_pred CCCCHHHH
Q ss_conf 99999999
Q 003508 387 NPWNITEV 394 (814)
Q Consensus 387 nP~d~~~l 394 (814)
-. ..+++
T Consensus 701 G~-~~~ev 707 (824)
T d2gj4a1 701 GM-RVEDV 707 (824)
T ss_dssp SC-CHHHH
T ss_pred CC-CHHHH
T ss_conf 79-71555
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.94 E-value=0.15 Score=24.84 Aligned_cols=50 Identities=6% Similarity=-0.088 Sum_probs=32.7
Q ss_pred CCEEEEEE---CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
Q ss_conf 91999997---89999999999999834156589997559998179999599997636
Q 003508 634 SKSVEVRA---VGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFE 688 (814)
Q Consensus 634 ~~~vEI~p---~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~ 688 (814)
...+++.. ...+|+..+.....+.... .+.+.++++|| +.||..|-..+.
T Consensus 192 ~~~~~~~~~~i~~~~K~~~~~~~~~~~~~~----~~~~~vI~iGD-s~~Dl~Ma~g~~ 244 (291)
T d2bdua1 192 GVLKGFKGELIHVFNKHDGALKNTDYFSQL----KDNSNIILLGD-SQGDLRMADGVA 244 (291)
T ss_dssp SBEEEECSSCCCTTCHHHHHHTTHHHHHHT----TTCCEEEEEES-SSGGGGTTTTCS
T ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHCC----CCCCCEEEEEC-CHHHHHHHHCCC
T ss_conf 268603478643456863154459988532----78676899967-776899983885
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=86.07 E-value=0.18 Score=24.39 Aligned_cols=40 Identities=18% Similarity=0.155 Sum_probs=34.2
Q ss_pred CCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCC
Q ss_conf 98966999999853199945999928996789984110393
Q 003508 499 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNL 539 (814)
Q Consensus 499 ~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~~l 539 (814)
.|.+.+.++|..|.+ .|.+++|+||++.......+..+++
T Consensus 215 ~p~~~v~~~l~~lk~-aGi~v~i~Tg~~~~~a~~il~~lgl 254 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKG-AGFELGIATGRPYTETVVPFENLGL 254 (380)
T ss_dssp SCHHHHHHHHHHHHH-TTCEEEEECSSCHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHCCC
T ss_conf 343639999999998-7995999889979999999998199
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=85.55 E-value=0.54 Score=21.36 Aligned_cols=43 Identities=16% Similarity=-0.037 Sum_probs=35.1
Q ss_pred EECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCC
Q ss_conf 97899999999999998341565899975599981799995999976367
Q 003508 640 RAVGVTKGAAIDRILAEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 640 ~p~~~nKG~ai~~ll~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~~ 689 (814)
...+-.|...+..+++.++ .+++.++++|| ..+|..+-+.++-
T Consensus 133 ~~~~~~~p~~~~~~~~~~~------~~~~~~v~VGD-s~~Di~aa~~aGi 175 (210)
T d2ah5a1 133 SPEAPHKADVIHQALQTHQ------LAPEQAIIIGD-TKFDMLGARETGI 175 (210)
T ss_dssp CSSCCSHHHHHHHHHHHTT------CCGGGEEEEES-SHHHHHHHHHHTC
T ss_pred CCCCCCCCCCCCHHHHHHH------CCCCCCEEECC-CHHHHHHHHHCCC
T ss_conf 3222223332110123320------12001646547-7789999998599
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=84.95 E-value=0.32 Score=22.78 Aligned_cols=142 Identities=20% Similarity=0.245 Sum_probs=70.5
Q ss_pred HCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCEEECCCCEEEEECCCCEEECCCCCCCHHHHHHHHHH
Q ss_conf 10298966999999853199945999928996789984110393698018579982898200126554795789889999
Q 003508 496 MELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQEYNLWLAAENGMFLRCTTGKWMTTMPEHLNMEWVDSLKHV 575 (814)
Q Consensus 496 ~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~~~~l~liaehG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i 575 (814)
...+..|...++|+.|++ .-+-+|||---..-++...+..+++ + | .+.+.-..... ......++.+..+
T Consensus 78 ~~~~lvpgA~~~lk~l~~--~m~~yIvSTSY~qyi~al~~~~gfp--~-e---~~~T~~~lD~~---~~p~ee~e~ll~i 146 (308)
T d1y8aa1 78 LSAKFVPDAEKAMATLQE--RWTPVVISTSYTQYLRRTASMIGVR--G-E---LHGTEVDFDSI---AVPEGLREELLSI 146 (308)
T ss_dssp HHCCBCTTHHHHHHHHHT--TCEEEEEEEEEHHHHHHHHHHTTCC--S-E---EEEEBCCGGGC---CCCHHHHHHHHHH
T ss_pred HCEEECCCHHHHHHHHHH--HCCCEEEECCHHHHHHHHHHHCCCC--C-E---EECCCCCCCCC---CCCHHHHHHHHHH
T ss_conf 402526888999999986--4884798535899999998535887--4-0---10023443124---7871779999887
Q ss_pred HHHHHCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECC-CCHHHHHHHHH
Q ss_conf 99976059981332026338997025771333777999999981299899964999949199999789-99999999999
Q 003508 576 FEYFTERTPRSHFEQRETSLVWNYKYADVEFGRIQARDMLQHLWTGPISNASVEVVQGSKSVEVRAVG-VTKGAAIDRIL 654 (814)
Q Consensus 576 ~~~~~~~~~Gs~iE~K~~~i~~hyr~ad~e~~~~~a~el~~~l~~~~~~~~~~~v~~g~~~vEI~p~~-~nKG~ai~~ll 654 (814)
.....+ +++-+. ++.-+.-+....+..+.+. |++.| -.|..+++.++
T Consensus 147 ~~~~~d---~~~eel--------~e~~d~~f~~~e~~~i~e~---------------------Vk~VGgg~k~~i~~~~~ 194 (308)
T d1y8aa1 147 IDVIAS---LSGEEL--------FRKLDELFSRSEVRKIVES---------------------VKAVGAGEKAKIMRGYC 194 (308)
T ss_dssp HHHHHH---CCHHHH--------HHHHHHHHHSHHHHHHHHT---------------------CBCCCHHHHHHHHHHHH
T ss_pred HHHCCC---CCHHHH--------HHHHHHHHCCCHHHHHHHH---------------------HCCCCCCHHHHHHHHHC
T ss_conf 653037---537788--------9999987131157668764---------------------02147851678998633
Q ss_pred HHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCC
Q ss_conf 98341565899975599981799995999976367
Q 003508 655 AEIVHSKKMKTAIDYVLCIGHFLGKDEDVYAFFEP 689 (814)
Q Consensus 655 ~~~~~~~~~~~~~d~vi~iGD~d~tDE~mF~~~~~ 689 (814)
+..+ .++.+|+|| +.||.+||+.++.
T Consensus 195 ~~~~--------~~~~~~VGD-SITDve~Lr~~r~ 220 (308)
T d1y8aa1 195 ESKG--------IDFPVVVGD-SISDYKMFEAARG 220 (308)
T ss_dssp HHHT--------CSSCEEEEC-SGGGHHHHHHHHH
T ss_pred CCCC--------CCCCEECCC-CCCCHHHHHHHHC
T ss_conf 6126--------986412367-5332789999744
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=84.59 E-value=0.36 Score=22.49 Aligned_cols=28 Identities=7% Similarity=0.044 Sum_probs=18.2
Q ss_pred CEEEEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf 2599996798763343238957999999
Q 003508 770 NYFSCAVGRPRTNARFLLQSSDEVVSFL 797 (814)
Q Consensus 770 ~~~t~~VG~~~t~A~~~l~~~~~v~~~L 797 (814)
+.-+|.|..+...+.+.+++..++..++
T Consensus 174 G~~~i~v~~~~~~~~~~~~~~~dl~~l~ 201 (204)
T d2go7a1 174 GIQSINFLESTYEGNHRIQALADISRIF 201 (204)
T ss_dssp TCEEEESSCCSCTTEEECSSTTHHHHHT
T ss_pred CCEEEEECCCCCCCCEECCCHHHHHHHH
T ss_conf 9969998479999580048998999986
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.92 E-value=0.96 Score=19.82 Aligned_cols=71 Identities=15% Similarity=0.161 Sum_probs=44.8
Q ss_pred HCCCEEEEEECCCCCCCCCCCCCCCCCCHH---------HHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHC
Q ss_conf 116919999268765899889998885011---------21029896699999985319994599992899678998411
Q 003508 465 RSNNRLLILGFNATLTEPVDTPGRRGDQIR---------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKNFQ 535 (814)
Q Consensus 465 ~s~~rLi~lD~DGTL~~~~~~p~~~~~~~~---------~~~~~~~~~~~~~L~~L~~~~~~~V~IvSGR~~~~L~~~~~ 535 (814)
.+++..+++|+|+||+-....|....+... ......-|.+.+-|+.+++ ...|+|-|.-+....+..+.
T Consensus 12 ~~~k~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~--~yei~I~Ta~~~~YA~~il~ 89 (181)
T d1ta0a_ 12 DSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGE--LFECVLFTASLAKYADPVAD 89 (181)
T ss_dssp GTTSCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHH
T ss_pred CCCCEEEEEECCCCEECCCCCCCCCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHH--CEEEEEECCCCHHHHHHHHH
T ss_conf 6898189996899778542678877664100001210133478639889999999986--00899983871778999999
Q ss_pred CC
Q ss_conf 03
Q 003508 536 EY 537 (814)
Q Consensus 536 ~~ 537 (814)
.+
T Consensus 90 ~l 91 (181)
T d1ta0a_ 90 LL 91 (181)
T ss_dssp HH
T ss_pred HH
T ss_conf 86
|