Citrus Sinensis ID: 003514

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810----
MAARVEIDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPAQLVEGLGSGAWPYRGLRSDPSDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
ccccEEccccccccccccccccccccccccHHHcccccccccccccHHHHHHHHHHHccEEEccccccHHHHHHHcccccccccccEEHHHHHHHHHHHHHHHHHEEEEEEEcccccccHHHHHHHHHHccccccccccccccHHHHHcccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcccEEccHHHHHHHHHccccccccccccEEHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEcccHHHHHHHHHHccccEEEEEccEEEEccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccccccHHHHHHHHHHHHEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccccccccccEEEEEcccccccHHHHHHHHHHcccccEEEEEEEEEEEcccccccccEEEEEEEccccccEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEccEEEEccccccHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEc
ccccEEcccccccccccHHHHHccccccHHHHccccccccccccccHHHHHHHHHHHccEEEcccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccHHHHHHHHHHHHHcccccccccHHHHHHHccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHEHEccccccHHHHHHHHHcccEEccccccccEEHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHEcccHHHHHHccHHHHHHHHHHcccccEEEccEEEEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHEEEEHcccccHHHHHHHccccccEEcccEEEEHHHHHccccHHHHHHHHccccHEEEEEEEEEEEcccccccHHHEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccHHHHHHHHHHHHHHHccEEEEEEccEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHEEEcEEEEc
maarveidednetnkgsMWVLdqkldqpmdEEAGRLRNMYREKKFSSLLLLRFAFQSLGVvygdlgtsplyvfyntfphgiddpeDIIGALSLIIYSLTLIPLLKYVFIVCrandsgqggtFALYSLLCRHAkvitipnqhrtdeelttysrstfhEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLsasggikvdhphmsnGVVVLVAVVILVGLFSlqhygtdrvgwLFAPIVLLWFLLIGGIGMLNIWKYDssvlkafspvYIYRYFrrggrdgwtslGGIMLSITGTEALFADlahfpvsaIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPAQLVEglgsgawpyrglrsdpsdsiywpVFIVATAAAIVASQATISATFSIIKQALAlgcfprvkvvhtskkflgqiyipdiNWILMILCIAVTagfknqsqignaYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFkvdqggwvPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILglgpslglvrvpgiGLVYTElasgvphifshfitnlpaiHSVVVFVCVkylpvytvpeeerflvkrigpknfhmFRCVArygykdlhkkdeNFEKKLFDSLFLFVRLEAMmegcsdsdeyslygqqtlqstdgllnnngnstssnqdltmssvdsivpvksplhvnstvmsssqmsshtetdELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICREnsvifnvphesllnvgqifyv
maarveidednetnkgsmwvldqkldqPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVitipnqhrtdeelttysrstfheKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPAQLVEGLGSGAWPYRGLRSDPSDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPvytvpeeerflvkrigpknfhMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTvvrasrgskfyKKIAIDYIYAFLRKICRENSVIfnvphesllnvgqifyv
MAARVEIDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGvvvlvavvilvglFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPAQLVEGLGSGAWPYRGLRSDPSDSIYWPVFivataaaivasqatisatFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGtavvivmlattllmtlimilvWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQstdgllnnngnstssnQDLTMSSVDSIVPVKSPLHVNstvmsssqmssHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
**************************************MYREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPAQLVEGLGSGAWPYRGLRSDPSDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSD***YSLY************************************************************LEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFY*
************************************************LLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHR*************************LEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPAQLVEGLGSGAWPYRGLRSDPSDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEA****************************************************************************FLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
*************NKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPAQLVEGLGSGAWPYRGLRSDPSDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNS***************ELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
*************************DQP*DE************KFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPAQLVEGLGSGAWPYRGLRSDPSDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMME***************************************************HVNSTV*SSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
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MAARVEIDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPAQLVEGLGSGAWPYRGLRSDPSDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query814 2.2.26 [Sep-21-2011]
O64769792 Potassium transporter 11 yes no 0.963 0.989 0.806 0.0
Q9SA05796 Potassium transporter 10 no no 0.968 0.989 0.790 0.0
Q7XLC6791 Probable potassium transp yes no 0.965 0.993 0.756 0.0
Q8VXB1793 Putative potassium transp no no 0.966 0.992 0.746 0.0
Q653B6793 Potassium transporter 18 no no 0.965 0.991 0.718 0.0
O49423807 Potassium transporter 9 O no no 0.970 0.978 0.708 0.0
Q8H3P9811 Potassium transporter 7 O no no 0.906 0.909 0.498 0.0
Q942X8783 Probable potassium transp no no 0.934 0.971 0.472 0.0
Q6H4R6877 Potassium transporter 23 no no 0.917 0.851 0.477 0.0
O80739827 Putative potassium transp no no 0.904 0.889 0.472 0.0
>sp|O64769|POT11_ARATH Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=1 SV=1 Back     alignment and function desciption
 Score = 1290 bits (3337), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 663/822 (80%), Positives = 725/822 (88%), Gaps = 38/822 (4%)

Query: 1   MAARVE-------IDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRF 53
           MAARVE       IDE+    +GSMW LDQKLDQ MDEEAGRLRNMYREKKFS+LLLL+ 
Sbjct: 1   MAARVEAATMGGEIDEEESDERGSMWDLDQKLDQSMDEEAGRLRNMYREKKFSALLLLQL 60

Query: 54  AFQSLGVVYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRA 113
           +FQSLGVVYGDLGTSPLYVFYNTFPHGI DPEDIIGALSLIIYSLTLIPLLKYVF+VC+A
Sbjct: 61  SFQSLGVVYGDLGTSPLYVFYNTFPHGIKDPEDIIGALSLIIYSLTLIPLLKYVFVVCKA 120

Query: 114 NDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTF 173
           ND+GQGGTFALYSLLCRHAKV TI NQHRTDEELTTYSR+TFHE SFAAKTKRWLE +T 
Sbjct: 121 NDNGQGGTFALYSLLCRHAKVKTIQNQHRTDEELTTYSRTTFHEHSFAAKTKRWLEKRTS 180

Query: 174 RKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFS 233
           RK ALL+LVLVGTCMVIGDGILTPAISVLSA+GG++V+ PH+SNGVVV VAVVILV LFS
Sbjct: 181 RKTALLILVLVGTCMVIGDGILTPAISVLSAAGGLRVNLPHISNGVVVFVAVVILVSLFS 240

Query: 234 LQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGW 293
           +QHYGTDRVGWLFAPIV LWFL I  IGM NIWK+D+SVLKAFSPVYIYRYF+RGGRD W
Sbjct: 241 VQHYGTDRVGWLFAPIVFLWFLSIASIGMYNIWKHDTSVLKAFSPVYIYRYFKRGGRDRW 300

Query: 294 TSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVD 353
           TSLGGIMLSITG EALFADL+HFPVSA+QIAFTV+VFPCLLLAYSGQAAY+  + DHV D
Sbjct: 301 TSLGGIMLSITGIEALFADLSHFPVSAVQIAFTVIVFPCLLLAYSGQAAYIRRYPDHVAD 360

Query: 354 AFYRSIPAQLVEGLGSGAWPYRGLRSDPSDSIYWPVFIVATAAAIVASQATISATFSIIK 413
           AFYRSIP                       S+YWP+FI+ATAAAIVASQATISATFS++K
Sbjct: 361 AFYRSIPG----------------------SVYWPMFIIATAAAIVASQATISATFSLVK 398

Query: 414 QALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVI 473
           QALA GCFPRVKVVHTS+KFLGQIY+PDINWILMILCIAVTAGFKNQSQIGNAYGTAVVI
Sbjct: 399 QALAHGCFPRVKVVHTSRKFLGQIYVPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVI 458

Query: 474 VMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAF 533
           VML TTLLMTLIMILVWRCHW+LVLIFT LSLVVECTYFSA+LFK+DQGGWVPLVIAAAF
Sbjct: 459 VMLVTTLLMTLIMILVWRCHWVLVLIFTVLSLVVECTYFSAMLFKIDQGGWVPLVIAAAF 518

Query: 534 LVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSH 593
           L+IM+VWHYGT+KRYEFEMH +VSMAWILGLGPSLGLVRVPG+GLVYTELASGVPHIFSH
Sbjct: 519 LLIMWVWHYGTLKRYEFEMHCRVSMAWILGLGPSLGLVRVPGVGLVYTELASGVPHIFSH 578

Query: 594 FITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDE 653
           FITNLPAIHSVVVFVCVK LPVYTVPEEERFLVKRIGPKNFHMFRCVARYGY+DLHKKD+
Sbjct: 579 FITNLPAIHSVVVFVCVKNLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYRDLHKKDD 638

Query: 654 NFEKKLFDSLFLFVRLEAMME-GCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTM 712
           +FEK+LF+SLFL+VRLE+MME GCSDSD+YS+ G Q  Q  D L N N N   +  D T 
Sbjct: 639 DFEKRLFESLFLYVRLESMMEGGCSDSDDYSICGSQQ-QLKDTLGNGNENENLATFD-TF 696

Query: 713 SSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGS 772
            S++SI PVK    V++TV +SSQMS     DELEF+N CRDAGVVHI+GNTVVRA R +
Sbjct: 697 DSIESITPVK---RVSNTVTASSQMSG---VDELEFINGCRDAGVVHIMGNTVVRARREA 750

Query: 773 KFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 814
           +FYKKIAIDY+YAFLRKICRE+SVI+NVP ESLLNVGQIFYV
Sbjct: 751 RFYKKIAIDYVYAFLRKICREHSVIYNVPQESLLNVGQIFYV 792
Probable potassium transporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SA05|POT10_ARATH Potassium transporter 10 OS=Arabidopsis thaliana GN=POT10 PE=2 SV=2 Back     alignment and function description
>sp|Q7XLC6|HAK11_ORYSJ Probable potassium transporter 11 OS=Oryza sativa subsp. japonica GN=HAK11 PE=2 SV=3 Back     alignment and function description
>sp|Q8VXB1|HAK12_ORYSJ Putative potassium transporter 12 OS=Oryza sativa subsp. japonica GN=HAK12 PE=2 SV=1 Back     alignment and function description
>sp|Q653B6|HAK18_ORYSJ Potassium transporter 18 OS=Oryza sativa subsp. japonica GN=HAK18 PE=2 SV=1 Back     alignment and function description
>sp|O49423|POT9_ARATH Potassium transporter 9 OS=Arabidopsis thaliana GN=POT9 PE=2 SV=2 Back     alignment and function description
>sp|Q8H3P9|HAK7_ORYSJ Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3 Back     alignment and function description
>sp|Q942X8|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1 Back     alignment and function description
>sp|Q6H4R6|HAK23_ORYSJ Potassium transporter 23 OS=Oryza sativa subsp. japonica GN=HAK23 PE=2 SV=1 Back     alignment and function description
>sp|O80739|POT12_ARATH Putative potassium transporter 12 OS=Arabidopsis thaliana GN=POT12 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query814
359472756790 PREDICTED: potassium transporter 11-like 0.970 1.0 0.869 0.0
224125216792 predicted protein [Populus trichocarpa] 0.972 1.0 0.863 0.0
356528128791 PREDICTED: potassium transporter 11-like 0.971 1.0 0.845 0.0
356510798791 PREDICTED: potassium transporter 11-like 0.971 1.0 0.842 0.0
224071529792 predicted protein [Populus trichocarpa] 0.972 1.0 0.847 0.0
348161633790 potassium trasporter 1 [Amaranthus sp. L 0.963 0.992 0.827 0.0
449454772791 PREDICTED: potassium transporter 11-like 0.970 0.998 0.841 0.0
398025471803 putative potassium transporter KUP11, pa 0.968 0.981 0.813 0.0
356556167790 PREDICTED: probable potassium transporte 0.969 0.998 0.814 0.0
297737993743 unnamed protein product [Vitis vinifera] 0.912 1.0 0.825 0.0
>gi|359472756|ref|XP_002276261.2| PREDICTED: potassium transporter 11-like [Vitis vinifera] gi|147778418|emb|CAN60810.1| hypothetical protein VITISV_036657 [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1422 bits (3681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 708/814 (86%), Positives = 756/814 (92%), Gaps = 24/814 (2%)

Query: 1   MAARVEIDEDNETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGV 60
           MA+ +E +ED+E NKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFS++LLLR AFQSLGV
Sbjct: 1   MASGIEFEEDSE-NKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSAVLLLRLAFQSLGV 59

Query: 61  VYGDLGTSPLYVFYNTFPHGIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGG 120
           VYGDLGTSPLYVFYNTFP GI+DPED++GALSLIIYSLTLIPLLKY+F+VCRAND+GQGG
Sbjct: 60  VYGDLGTSPLYVFYNTFPRGIEDPEDVVGALSLIIYSLTLIPLLKYIFVVCRANDNGQGG 119

Query: 121 TFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLM 180
           TFALYSLLCRHAK+ TIPNQHRTDEELTTYSR+TFHE S+AAKTKRWLE    RKN LL+
Sbjct: 120 TFALYSLLCRHAKINTIPNQHRTDEELTTYSRTTFHEHSYAAKTKRWLEGHASRKNMLLI 179

Query: 181 LVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTD 240
           LVLVGTCM+IGDGILTPAISVLSA+GGIKVDHP MSN +VVLVAVVILVGLFS+QHYGTD
Sbjct: 180 LVLVGTCMLIGDGILTPAISVLSAAGGIKVDHPGMSNEIVVLVAVVILVGLFSMQHYGTD 239

Query: 241 RVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIM 300
           RVGWLFAPIVLLWFL+IGGIG+ NIWKYDSSVLKAFSPVYIYRYF+RGGRDGWTSLGGIM
Sbjct: 240 RVGWLFAPIVLLWFLVIGGIGIFNIWKYDSSVLKAFSPVYIYRYFKRGGRDGWTSLGGIM 299

Query: 301 LSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIP 360
           LSITGTEALFADLAHFPVSA+Q+AFTVVVFPCLLLAYSGQAAYL+ +QDHVVDAFYRSIP
Sbjct: 300 LSITGTEALFADLAHFPVSAVQLAFTVVVFPCLLLAYSGQAAYLVKNQDHVVDAFYRSIP 359

Query: 361 AQLVEGLGSGAWPYRGLRSDPSDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGC 420
                                 DSIYWPVF+VATAAAIVASQATISATFSIIKQALALGC
Sbjct: 360 ----------------------DSIYWPVFVVATAAAIVASQATISATFSIIKQALALGC 397

Query: 421 FPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTL 480
           FPRVKVVHTSKKFLGQIYIPDINW+LM+LCIAVTAGFKNQSQIGNAYGTAVVIVMLATT 
Sbjct: 398 FPRVKVVHTSKKFLGQIYIPDINWVLMVLCIAVTAGFKNQSQIGNAYGTAVVIVMLATTF 457

Query: 481 LMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVW 540
           LM LIM+LVWRCHW+LVLIFT LSL VECTYFSAVLFKVDQGGWVPLVIAAAFL+IMYVW
Sbjct: 458 LMILIMLLVWRCHWLLVLIFTGLSLAVECTYFSAVLFKVDQGGWVPLVIAAAFLIIMYVW 517

Query: 541 HYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPA 600
           HYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPA
Sbjct: 518 HYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPA 577

Query: 601 IHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLF 660
           IHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKD++FEKKLF
Sbjct: 578 IHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLF 637

Query: 661 DSLFLFVRLEAMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVP 720
           D+LF+FVRLE+MMEGCSDSDEYSLYG QT QS D LLN+NGN+ SSN DLT+SSVDSIVP
Sbjct: 638 DNLFMFVRLESMMEGCSDSDEYSLYG-QTEQSRDCLLNDNGNTNSSNLDLTISSVDSIVP 696

Query: 721 VKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAI 780
           VKSPLH ++TV SS   S+ TE DELEF+N+CR AGVVHILGNTVVRA R S+FYKKIA+
Sbjct: 697 VKSPLHASNTVTSSGHTSNQTEGDELEFMNNCRSAGVVHILGNTVVRARRDSRFYKKIAV 756

Query: 781 DYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 814
           DYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV
Sbjct: 757 DYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 790

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224125216|ref|XP_002329922.1| predicted protein [Populus trichocarpa] gi|222871159|gb|EEF08290.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356528128|ref|XP_003532657.1| PREDICTED: potassium transporter 11-like [Glycine max] Back     alignment and taxonomy information
>gi|356510798|ref|XP_003524121.1| PREDICTED: potassium transporter 11-like [Glycine max] Back     alignment and taxonomy information
>gi|224071529|ref|XP_002303503.1| predicted protein [Populus trichocarpa] gi|222840935|gb|EEE78482.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|348161633|gb|AEP68018.1| potassium trasporter 1 [Amaranthus sp. LHY-2011] Back     alignment and taxonomy information
>gi|449454772|ref|XP_004145128.1| PREDICTED: potassium transporter 11-like [Cucumis sativus] gi|449471385|ref|XP_004153294.1| PREDICTED: potassium transporter 11-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|398025471|gb|AFO70207.1| putative potassium transporter KUP11, partial [Alternanthera philoxeroides] Back     alignment and taxonomy information
>gi|356556167|ref|XP_003546398.1| PREDICTED: probable potassium transporter 11-like [Glycine max] Back     alignment and taxonomy information
>gi|297737993|emb|CBI27194.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query814
TAIR|locus:2044717793 KUP11 "K+ uptake permease 11" 0.525 0.539 0.707 0.0
TAIR|locus:2029589796 KUP10 "K+ uptake permease 10" 0.525 0.537 0.697 0.0
TAIR|locus:2119812823 KUP9 "AT4G19960" [Arabidopsis 0.970 0.959 0.639 2.2e-279
TAIR|locus:2078688789 KUP3 "AT3G02050" [Arabidopsis 0.406 0.419 0.479 7.9e-181
TAIR|locus:2061838794 KT2 "potassium transporter 2" 0.406 0.416 0.511 5.7e-172
TAIR|locus:2195688827 AT1G60160 [Arabidopsis thalian 0.519 0.511 0.396 6.9e-171
TAIR|locus:2045639712 KT1 "potassium transporter 1" 0.390 0.446 0.473 1.3e-170
TAIR|locus:2185515781 KUP8 "potassium uptake 8" [Ara 0.540 0.563 0.414 7.8e-170
TAIR|locus:2134153855 KUP5 "K+ uptake permease 5" [A 0.533 0.507 0.395 6.5e-169
TAIR|locus:2016139782 KUP6 "K+ uptake permease 6" [A 0.529 0.551 0.407 8.1e-166
TAIR|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1604 (569.7 bits), Expect = 0., Sum P(2) = 0.
 Identities = 310/438 (70%), Positives = 343/438 (78%)

Query:   378 RSDPSDSIYWPVFXXXXXXXXXXXXXXXXXXFSIIKQALALGCFPRVKVVHTSKKFLGQI 437
             RS P  S+YWP+F                  FS++KQALA GCFPRVKVVHTS+KFLGQI
Sbjct:   365 RSIPG-SVYWPMFIIATAAAIVASQATISATFSLVKQALAHGCFPRVKVVHTSRKFLGQI 423

Query:   438 YIPDINWILMILCIAVTAGFKNQSQIGNAYGXXXXXXXXXXXXXXXXXXXXXWRCHWILV 497
             Y+PDINWILMILCIAVTAGFKNQSQIGNAYG                     WRCHW+LV
Sbjct:   424 YVPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLVTTLLMTLIMILVWRCHWVLV 483

Query:   498 LIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVS 557
             LIFT LSLVVECTYFSA+LFK+DQGGWVPLVIAAAFL+IM+VWHYGT+KRYEFEMH +VS
Sbjct:   484 LIFTVLSLVVECTYFSAMLFKIDQGGWVPLVIAAAFLLIMWVWHYGTLKRYEFEMHCRVS 543

Query:   558 MAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYT 617
             MAWILGLGPSLGLVRVPG+GLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVK LPVYT
Sbjct:   544 MAWILGLGPSLGLVRVPGVGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKNLPVYT 603

Query:   618 VPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEG-C 676
             VPEEERFLVKRIGPKNFHMFRCVARYGY+DLHKKD++FEK+LF+SLFL+VRLE+MMEG C
Sbjct:   604 VPEEERFLVKRIGPKNFHMFRCVARYGYRDLHKKDDDFEKRLFESLFLYVRLESMMEGGC 663

Query:   677 SDSDEYSLYGQQTLQXXXXXXXXXXXXXXXXQDLTMSSVDSIVPVKSPLHVNXXXXXXXX 736
             SDSD+YS+ G Q  Q                 D T  S++SI PVK    V+        
Sbjct:   664 SDSDDYSICGSQQ-QLKDTLGNGNENENLATFD-TFDSIESITPVK---RVSNTVTASSQ 718

Query:   737 XXXHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSV 796
                    DELEF+N CRDAGVVHI+GNTVVRA R ++FYKKIAIDY+YAFLRKICRE+SV
Sbjct:   719 MSG---VDELEFINGCRDAGVVHIMGNTVVRARREARFYKKIAIDYVYAFLRKICREHSV 775

Query:   797 IFNVPHESLLNVGQIFYV 814
             I+NVP ESLLNVGQIFYV
Sbjct:   776 IYNVPQESLLNVGQIFYV 793
GO:0005737 "cytoplasm" evidence=ISM
GO:0006813 "potassium ion transport" evidence=ISS
GO:0015079 "potassium ion transmembrane transporter activity" evidence=IEA;ISS
GO:0016020 "membrane" evidence=IEA
GO:0071805 "potassium ion transmembrane transport" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009555 "pollen development" evidence=IMP
TAIR|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2119812 KUP9 "AT4G19960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078688 KUP3 "AT3G02050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045639 KT1 "potassium transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2185515 KUP8 "potassium uptake 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134153 KUP5 "K+ uptake permease 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016139 KUP6 "K+ uptake permease 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q7XLC6HAK11_ORYSJNo assigned EC number0.75610.96560.9936yesno
Q9SA05POT10_ARATHNo assigned EC number0.79070.96800.9899nono
O64769POT11_ARATHNo assigned EC number0.80650.96310.9898yesno
O49423POT9_ARATHNo assigned EC number0.70870.97050.9789nono
Q653B6HAK18_ORYSJNo assigned EC number0.71840.96560.9911nono
Q8VXB1HAK12_ORYSJNo assigned EC number0.74660.96680.9924nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_1270080
hypothetical protein (792 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query814
PLN00150779 PLN00150, PLN00150, potassium ion transporter fami 0.0
PLN00148785 PLN00148, PLN00148, potassium transporter; Provisi 0.0
PLN00151852 PLN00151, PLN00151, potassium transporter; Provisi 0.0
PLN00149779 PLN00149, PLN00149, potassium transporter; Provisi 0.0
TIGR00794688 TIGR00794, kup, potassium uptake protein 0.0
pfam02705534 pfam02705, K_trans, K+ potassium transporter 0.0
COG3158627 COG3158, Kup, K+ transporter [Inorganic ion transp 1e-145
PRK10745622 PRK10745, trkD, potassium transport protein Kup; P 7e-97
COG0531466 COG0531, PotE, Amino acid transporters [Amino acid 5e-05
>gnl|CDD|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional Back     alignment and domain information 
 Score = 1006 bits (2603), Expect = 0.0
 Identities = 448/804 (55%), Positives = 580/804 (72%), Gaps = 33/804 (4%)

Query: 12  ETNKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSSLLLLRFAFQSLGVVYGDLGTSPLY 71
           E+N+G +W LDQ++ +P+  +A  +R+MY        +++  A+QSLGVVYGDLGTSPLY
Sbjct: 8   ESNQGRLWDLDQRITRPLGVDADSVRSMYFSSPNWPKVIMHLAYQSLGVVYGDLGTSPLY 67

Query: 72  VFYNTFPH-GIDDPEDIIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCR 130
           VF +TF + G+ + +DIIGALSLIIY+LT+IPL+KYVFIV RAND+G+GG+FALYSLLCR
Sbjct: 68  VFKSTFANVGVKNNDDIIGALSLIIYTLTIIPLIKYVFIVLRANDNGEGGSFALYSLLCR 127

Query: 131 HAKVITIPNQHRTDEELTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLMLVLVGTCMVI 190
           +  +  +PNQH TD ELTTY     + K+     +R LE+    +N LL++VL+GTCMVI
Sbjct: 128 YCNISLLPNQHPTDVELTTYVVDNMNRKTR---IQRKLENSRVWQNVLLLIVLLGTCMVI 184

Query: 191 GDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIV 250
           GDGILTP+ISVLSA  GIK     +   +V +++ VILV LFSLQ +GT +V +LFAPI 
Sbjct: 185 GDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIF 244

Query: 251 LLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALF 310
           L WF  +  IG  NI K+D SV  AF+P+YI  +F R GR GW SLGGI+L +TGTEA+F
Sbjct: 245 LCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMF 304

Query: 311 ADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPAQLVEGLGSG 370
           ADL HF V ++QIAFT +V+PCLLL Y GQAAYL+ H + V D FYRS+P          
Sbjct: 305 ADLGHFTVKSMQIAFTSLVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPK--------- 355

Query: 371 AWPYRGLRSDPSDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTS 430
                         IYWP+F++AT +A++ASQA ISATFSI+KQA+ALGCFPRVK+VHTS
Sbjct: 356 -------------PIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTS 402

Query: 431 KKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVW 490
            K  GQ+YIP+INWILM+LC+ +TAGF++  +IGNAYG AVV VM+ TT LMTL+MI++W
Sbjct: 403 NKVHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIW 462

Query: 491 RCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEF 550
           R H +L L+F  +  ++E  YFSAVLFKV QGGWVPLVIAA F  +MY WHYGT KRY +
Sbjct: 463 RKHILLALLFFTVFAIIEGIYFSAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLY 522

Query: 551 EMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCV 610
           EM  KVS+ W+LGLGPSLGLVRVPGIGL+YT+LA GVP +FSHFITNLPAIHS VVFVC+
Sbjct: 523 EMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPLFSHFITNLPAIHSTVVFVCI 582

Query: 611 KYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLE 670
           KYLPV TVP++ERFL++RIGP+ + M+RC ARYGY DL KKD+NFE+ L  SL  F+ +E
Sbjct: 583 KYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLEKKDDNFEQLLIASLERFIEIE 642

Query: 671 AMMEGCSDSDEYSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNST 730
           +  E     D  S+    T +   G  N+ G+   +  D +  +  +    K P     +
Sbjct: 643 SFREQS---DLESMAASWTPEELMGEGNSVGSGLFTQYDQSDINFATSQEWKRPSSQEDS 699

Query: 731 VMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKI 790
           V   S  SS T+ DE+ FLN C++AGVV+ILGN  V+A + S F+KK+ I+YIY FLR+I
Sbjct: 700 V---SGHSSDTQ-DEVAFLNKCKEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRI 755

Query: 791 CRENSVIFNVPHESLLNVGQIFYV 814
            R++ V+ N+PHE LL VG ++YV
Sbjct: 756 SRDSEVVLNIPHECLLKVGMVYYV 779

Length = 779
>gnl|CDD|215077 PLN00148, PLN00148, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|215079 PLN00151, PLN00151, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|177753 PLN00149, PLN00149, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|129876 TIGR00794, kup, potassium uptake protein Back     alignment and domain information
>gnl|CDD|217193 pfam02705, K_trans, K+ potassium transporter Back     alignment and domain information
>gnl|CDD|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|182693 PRK10745, trkD, potassium transport protein Kup; Provisional Back     alignment and domain information
>gnl|CDD|223605 COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 814
PLN00151852 potassium transporter; Provisional 100.0
PLN00150779 potassium ion transporter family protein; Provisio 100.0
PLN00148785 potassium transporter; Provisional 100.0
PLN00149779 potassium transporter; Provisional 100.0
TIGR00794688 kup potassium uptake protein. Proteins of the KUP 100.0
PRK10745622 trkD potassium transport protein Kup; Provisional 100.0
PF02705534 K_trans: K+ potassium transporter; InterPro: IPR00 100.0
COG3158627 Kup K+ transporter [Inorganic ion transport and me 100.0
TIGR00911501 2A0308 L-type amino acid transporter. 88.12
>PLN00151 potassium transporter; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.6e-257  Score=2181.73  Aligned_cols=772  Identities=48%  Similarity=0.851  Sum_probs=702.7

Q ss_pred             ccccccceeccccCCCCchhhhhhcccc--cccccccHHHHHHHHHhhcceeecccccchhhhhhcccCC-CCCCcCcEe
Q 003514           12 ETNKGSMWVLDQKLDQPMDEEAGRLRNM--YREKKFSSLLLLRFAFQSLGVVYGDLGTSPLYVFYNTFPH-GIDDPEDII   88 (814)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~La~~slGVVyGDIGTSPLYv~~~~f~~-~~~~~~~il   88 (814)
                      +..++||||+++++|+ ++.|+++++++  |+.++.++|+++.|||||+|||||||||||||||+++|++ +.+++|||+
T Consensus        63 ~~~~~~~~~~~~~~d~-~~~e~~~~~~~~~~~~~~~~~w~~l~La~qslGVVyGDIGTSPLYv~~s~F~~~~~~~~~dIl  141 (852)
T PLN00151         63 GNMRRRLIRTPPRVDS-FDVEAMEIPGAHRHDSEDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKVPIKSEEDVL  141 (852)
T ss_pred             cchhhhHhhCCCccch-hhhcccccccccccccccccHHHHHHHHHhhhceEeCcCCCCHHHHHHHHhcCCCCCChhhee
Confidence            4557999999999999 99999998877  4566778888899999999999999999999999999976 347999999


Q ss_pred             hhHHHHHHHHHHhhhheeeEEEEeecCCCCChHHHHHHhhhccccccccCCCCCCchhhhhccccccc-cchhhhHHHHH
Q 003514           89 GALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEELTTYSRSTFH-EKSFAAKTKRW  167 (814)
Q Consensus        89 GvlSLIfWtLtliv~iKYv~ivL~Adn~GEGG~fALysLl~r~~~~~~~p~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~  167 (814)
                      |+|||||||||||+++|||+|||||||||||||||||||+|||+|++++||||++|+++|+|+.+.++ +.+++.++|++
T Consensus       142 GvLSLIfWtLtLiv~iKYV~iVLrAdd~GEGGtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~  221 (852)
T PLN00151        142 GALSLVLYTLILIPLAKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKER  221 (852)
T ss_pred             eehHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999988766 66778899999


Q ss_pred             hhhhhhhhHHHHHHHhHhhhhhhcCcccccchhhhhhcccccccCCCCCCceEehhHHHHHHHHHhhhcccccccccchh
Q 003514          168 LEHQTFRKNALLMLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFA  247 (814)
Q Consensus       168 le~~~~~~~~l~~l~l~G~~m~~gDGvlTPAISVLSAVeGl~v~~p~l~~~~Vv~is~~ILv~LF~~Q~~GT~kvg~~F~  247 (814)
                      ||+|+++|+++++++++|+||+||||+||||||||||||||+++.|++++++||+|||+||++||++||+||+|||++||
T Consensus       222 lE~s~~~k~~ll~l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~Fg  301 (852)
T PLN00151        222 LETSSLLKKLLLLLVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFG  301 (852)
T ss_pred             hhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHhhhhhccccCcceeeecChHHHHHHHHhcCcceeeeecceeeeeccccccccCCCCCCCcceeehhhH
Q 003514          248 PIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTV  327 (814)
Q Consensus       248 PIm~vWf~~i~~~GiynI~~~~P~Vl~AlnP~ya~~ff~~~~~~g~~~LG~V~L~iTG~EALyADlGHFg~~~Iriaw~~  327 (814)
                      |||++||++|+++|+|||++|||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||++
T Consensus       302 PImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~  381 (852)
T PLN00151        302 PALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTC  381 (852)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcchhhhhhccCCcccccccccccccccccCCCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHhHHhhh
Q 003514          328 VVFPCLLLAYSGQAAYLMNHQDHVVDAFYRSIPAQLVEGLGSGAWPYRGLRSDPSDSIYWPVFIVATAAAIVASQATISA  407 (814)
Q Consensus       328 ~V~PaLlL~Y~GQ~A~Ll~~p~~~~npFy~~iP~~~~~~~g~~~~~~~~~~~~~~~~~~wP~~vlAtlAtIIASQA~Isg  407 (814)
                      +|||||+|||+||||||++||++++||||+++|+                      |++||+|++||+||||||||+|||
T Consensus       382 ~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~----------------------~~~wP~~vlAtlAaIIASQA~ISg  439 (852)
T PLN00151        382 LVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPS----------------------SLFWPVFLIANLAALIASRAMTTA  439 (852)
T ss_pred             hHHHHHHHHHcchHHHHhcCcccccCcHHHhCCc----------------------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999                      999999999999999999999999


Q ss_pred             hhhHHHHHHHcCCCcceeEEecCCcccCceeehhhHHHHHHHhheeeEeecCchhhhhhhhchhhhHHHHHHHHHHHHHH
Q 003514          408 TFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMI  487 (814)
Q Consensus       408 ~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiAV~~~M~iTT~L~~~v~~  487 (814)
                      +||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||||||+||++||++||||+++||+
T Consensus       440 tFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~  519 (852)
T PLN00151        440 TFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVML  519 (852)
T ss_pred             HHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhhHHHHHHHHHHHHHHHHHHHHhhhcccCCCcHHHHHHHHHHHHHhhhhhhHHHHHHHHHhcCCChHHHHhcCCC
Q 003514          488 LVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPS  567 (814)
Q Consensus       488 ~vw~~~~~~~~~~~~~F~~ie~~f~sa~l~Kv~~GGW~pl~la~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~  567 (814)
                      .+||||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++||||++++|+++.+|++|++++.++.++
T Consensus       520 ~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~  599 (852)
T PLN00151        520 LIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSN  599 (852)
T ss_pred             HHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCceecceEEEEecCCCCcchhHHHHhhhCCccceEEEEEEEEEeeecccCCCcEEEEEEecCCCCCEEEEEEEeeecc
Q 003514          568 LGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKD  647 (814)
Q Consensus       568 ~~~~rvpG~~vf~t~~~~gvP~~f~h~l~~~~~lh~~~Vfl~i~~~~vP~V~~~eR~~v~~~~~~~~~~yr~~~ryGy~d  647 (814)
                      .++.||||+|+|||++.+|+|++|.||++|||++||++||||||++|+|+||++|||+++|+++++|++|||++||||||
T Consensus       600 ~~~~RVpGiglf~t~~~~gvP~~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D  679 (852)
T PLN00151        600 LGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKD  679 (852)
T ss_pred             CCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecc
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC-ChHHHHHHHHHHHHHHHHhhhhccCCCC-CC---------CccccccccccccccccCC--CCCCCCCCccccccc
Q 003514          648 LHK-KDENFEKKLFDSLFLFVRLEAMMEGCSD-SD---------EYSLYGQQTLQSTDGLLNN--NGNSTSSNQDLTMSS  714 (814)
Q Consensus       648 ~~~-~~~~fe~~lv~~L~~fI~~e~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  714 (814)
                      .++ ++++||++|+++|++|||+|+.....++ ++         +++........+.......  ......+++......
T Consensus       680 ~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  759 (852)
T PLN00151        680 VRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEAST  759 (852)
T ss_pred             cccccchHHHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccCCCcccccccccccccccccccccccccc
Confidence            976 7889999999999999999884321111 00         1111100000000000000  000000000000000


Q ss_pred             cCC-CCCcCCCccccccccCcccCCCcchhHHHHHHHHhHhCCcEEEeeecEEEecCCCchhHHHHHHHHHHHHHhhccC
Q 003514          715 VDS-IVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRE  793 (814)
Q Consensus       715 ~~~-~~~~~~~~~f~~~~~~~~~~~~~~veeEl~~L~~A~eaGVvYILG~s~VkAkk~SsflKK~vIN~~Y~FLRkNcR~  793 (814)
                      +.. ..+..+++++.      +.  +++++||+++|++|+|+||+||+||++|||||+|+|+||++|||+|+|||||||+
T Consensus       760 ~~~~~~~~~~~~~~~------~~--~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~  831 (852)
T PLN00151        760 SEEVSPVLPSSSMSS------DE--DQSLEYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRR  831 (852)
T ss_pred             ccccccccccccccc------cc--CccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccC
Confidence            000 00001222221      11  5789999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccccCCCCeEeeeeEEEC
Q 003514          794 NSVIFNVPHESLLNVGQIFYV  814 (814)
Q Consensus       794 ~~~~L~IPh~~LlEVGMvYev  814 (814)
                      |.++|+|||++|+||||+|||
T Consensus       832 ~~~~L~iP~~~lleVGm~Y~v  852 (852)
T PLN00151        832 GIANLSVPHSNIMQVGMTYMV  852 (852)
T ss_pred             cccccCCChHHeEEeceEEEC
Confidence            999999999999999999997

>PLN00150 potassium ion transporter family protein; Provisional Back     alignment and domain information
>PLN00148 potassium transporter; Provisional Back     alignment and domain information
>PLN00149 potassium transporter; Provisional Back     alignment and domain information
>TIGR00794 kup potassium uptake protein Back     alignment and domain information
>PRK10745 trkD potassium transport protein Kup; Provisional Back     alignment and domain information
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members Back     alignment and domain information
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00911 2A0308 L-type amino acid transporter Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query814
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 56.8 bits (136), Expect = 3e-08
 Identities = 75/542 (13%), Positives = 128/542 (23%), Gaps = 207/542 (38%)

Query: 7   IDEDNETNKGSMWVLDQKLDQPMD---------EEAGRL---------RNMYREKKFSSL 48
           ++E    N    +++     +            E+  RL          N+ R + +  L
Sbjct: 83  VEEVLRINYK--FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL 140

Query: 49  LLLRFAFQSLG-----VVYGDLGT--SPL-------YVFYNTFPHGI--------DDPED 86
              R A   L      ++ G LG+  + +       Y         I        + PE 
Sbjct: 141 ---RQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET 197

Query: 87  IIGALSLIIYSLTLIPLLKYVFIVCRANDSGQGGTFALYSLLCRHAKVITIPNQHRTDEE 146
           ++  L  ++Y +                          ++    H+    I    R    
Sbjct: 198 VLEMLQKLLYQID-----------------------PNWTSRSDHSS--NIK--LRI-HS 229

Query: 147 LTTYSRSTFHEKSFAAKTKRWLEHQTFRKNALLML----------VLVGTCMVIGDGILT 196
           +    R     K +              +N LL+L              +C ++   + T
Sbjct: 230 IQAELRRLLKSKPY--------------ENCLLVLLNVQNAKAWNAFNLSCKIL---LTT 272

Query: 197 PAISVLSASGGIKVDHP---HMSNG-----VVVLVAVVILVGLFSLQHYGTDRVGWLFAP 248
               V          H    H S       V  L+   +      L             P
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT-----NP 327

Query: 249 IVLLWFLLIGGIG-----MLNIWKY-------------DSSVLKAFSPVYIYRYFRRGGR 290
                   +  I       L  W               +SS L    P    + F     
Sbjct: 328 ------RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS-LNVLEPAEYRKMFD---- 376

Query: 291 DGWTSLGGIMLSITGTEALFADLAHFPVSAIQI------AFTVVVFPCLLLAYSGQAAYL 344
                     LS+      F   AH P   + +         V+V    L  YS     L
Sbjct: 377 ---------RLSV------FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS-----L 416

Query: 345 MNHQDHVVDAFYRSIP-----------------AQLVEGLGSGAWPYRGLRSDPSDSI-- 385
           +  Q         SIP                   +V+        Y   ++  SD +  
Sbjct: 417 VEKQP---KESTISIPSIYLELKVKLENEYALHRSIVDH-------YNIPKTFDSDDLIP 466

Query: 386 -----YWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIP 440
                Y+   I                 F ++        F   K+ H S  +     I 
Sbjct: 467 PYLDQYFYSHIGHHLKN--IEHPERMTLFRMVFLDFR---FLEQKIRHDSTAWNASGSIL 521

Query: 441 DI 442
           + 
Sbjct: 522 NT 523
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00