Citrus Sinensis ID: 003536
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 812 | ||||||
| 225463426 | 1011 | PREDICTED: uncharacterized protein LOC10 | 0.976 | 0.784 | 0.703 | 0.0 | |
| 356512165 | 989 | PREDICTED: uncharacterized protein LOC10 | 0.965 | 0.792 | 0.673 | 0.0 | |
| 224055495 | 887 | predicted protein [Populus trichocarpa] | 0.843 | 0.772 | 0.755 | 0.0 | |
| 42566924 | 1040 | starch synthase 4 [Arabidopsis thaliana] | 0.965 | 0.753 | 0.627 | 0.0 | |
| 255557389 | 998 | starch synthase, putative [Ricinus commu | 0.932 | 0.758 | 0.652 | 0.0 | |
| 2832698 | 1071 | starch synthase-like protein [Arabidopsi | 0.965 | 0.732 | 0.616 | 0.0 | |
| 350538831 | 1001 | starch synthase IV [Solanum lycopersicum | 0.937 | 0.760 | 0.678 | 0.0 | |
| 356524929 | 873 | PREDICTED: glycogen synthase-like [Glyci | 0.825 | 0.767 | 0.736 | 0.0 | |
| 4582783 | 874 | starch synthase, isoform V [Vigna unguic | 0.826 | 0.767 | 0.730 | 0.0 | |
| 357132826 | 921 | PREDICTED: glycogen synthase-like [Brach | 0.785 | 0.692 | 0.551 | 0.0 |
| >gi|225463426|ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257130 [Vitis vinifera] gi|297740652|emb|CBI30834.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1180 bits (3053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/832 (70%), Positives = 681/832 (81%), Gaps = 39/832 (4%)
Query: 1 MASKISTSFISPFVIHFNCKNSNNKNKHLNVPLLFSSRRLLPASCKMRQRSFGSQQKRQH 60
MA+K+ST F+S +CK SN + L S RLLPASCKMR R+F SQ KRQ
Sbjct: 1 MAAKLSTCFLSHGWGSLDCKRSNGR-------FLAPSHRLLPASCKMRHRNFSSQHKRQQ 53
Query: 61 VKKGSPDQQRPNDADLVPTSDGDSESESSLID--------REP----------IDVEHTE 102
KK SPD+ RP ++ D D+E E++L D P I +EH
Sbjct: 54 TKKVSPDR-RPTNSHFQSNGDEDTEPENALADGVSSLNQGTTPDDEDADVDSHIAIEHIN 112
Query: 103 EQNLGSVFVPELKESLVLNCDGGEELSTSQLDNLISMIRNAEKNILLLNEARVQALEDLH 162
+ L + V E L +N GE+LS+ QL++L+ M++NAEKNILLLN+ARV+AL+DL
Sbjct: 113 DNPLKHLTVSEEMTPLGINVKSGEQLSSFQLEDLVGMLKNAEKNILLLNQARVRALQDLE 172
Query: 163 KILQEKEALQGEINALEMRLAETDARIRVAAQEKIHVELLEDQLQKLQHELTHRGVSEHS 222
KIL EK+ALQGEIN LEMRLAET+ARI+VAAQEKIHVE+LE+QL L++EL+HRGV+E S
Sbjct: 173 KILTEKDALQGEINILEMRLAETNARIKVAAQEKIHVEILEEQLVNLRNELSHRGVTEGS 232
Query: 223 ELDVFANQNEPANEDLVLNNSEIHSFSKELDSLKTENLSLKNDIKVLKAELNSVKDADER 282
D+ N N+ + +HS KEL L+TEN+SLK+DI LK EL+ V+ D+R
Sbjct: 233 GADMHENWNKAFDG--------VHSLGKELSLLRTENVSLKDDILALKEELSHVQKTDKR 284
Query: 283 VVMLEMERSSLESSLKELESKLSISQEDVAKLSTLKVECKDLYEKVENLQGLLAKATKQA 342
VVMLE ERS LES+LKELE KL SQEDV+KLSTLK ECK+L+++VENLQ LL +AT QA
Sbjct: 285 VVMLEKERSFLESALKELEFKLVASQEDVSKLSTLKFECKNLWDRVENLQVLLDRATDQA 344
Query: 343 DQAISVLQQNQELRKKVDKLEESLDEANIYKLSSEKMQQYNELMQQKMKLLEERLQRSDE 402
D+AI VL+QNQELRKKVD LEESL+EAN+YKLSSEKMQQYN+LMQ+K+KLLEERL RSDE
Sbjct: 345 DKAILVLEQNQELRKKVDMLEESLEEANVYKLSSEKMQQYNDLMQKKIKLLEERLDRSDE 404
Query: 403 EIHSYVQLYQESVKEFQDTLHSLKEESKKRAVHEPVDDMPWEFWSRLLLIIDGWLLEKKL 462
EI SYV+LYQES+KEFQDTL++LKEESK+RA++EPVDDMPW+FWSRLLLIIDGWLLEKK+
Sbjct: 405 EILSYVKLYQESIKEFQDTLNNLKEESKRRALNEPVDDMPWDFWSRLLLIIDGWLLEKKI 464
Query: 463 STSEAKLLREMVWKRNGRIRDAYMECKEKNEHEAISTFLKLTSSSISSGLHVIHIAAEMA 522
S ++AKLLREMVWKR+GRIRDAY+ CK+ NEHEA++ FLKLTSS S LHVIHIAAEMA
Sbjct: 465 SANDAKLLREMVWKRDGRIRDAYLVCKDTNEHEAVAIFLKLTSSPKRSRLHVIHIAAEMA 524
Query: 523 PVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLF 582
PVAKVGGLGDVV+GL +ALQKKGHLVEIVLPKYDCMQYDRI DLR LD+ +ESYFDGRLF
Sbjct: 525 PVAKVGGLGDVVSGLSRALQKKGHLVEIVLPKYDCMQYDRIRDLRVLDMELESYFDGRLF 584
Query: 583 KNKVWVSTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFRRFSFFSRAALELLLQAGKQPD 642
+NKVWV T+EGLPVYFIEPHHP KFFWRG YGEHDDFRRFS+FSRAALELLLQAGK+PD
Sbjct: 585 RNKVWVGTVEGLPVYFIEPHHPSKFFWRGTVYGEHDDFRRFSYFSRAALELLLQAGKKPD 644
Query: 643 IIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNR 702
IIHCHDWQTAFVAPLYWDLY PKGLNSAR+CFTCHNFEYQGTAPA E+ASCGLDV LNR
Sbjct: 645 IIHCHDWQTAFVAPLYWDLYAPKGLNSARICFTCHNFEYQGTAPASEMASCGLDVHHLNR 704
Query: 703 PDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQ-----EGGQGLHSTLNFHSKKFVGI 757
PDRMQDNSAHDR+NP+KGAIVFSNIVTTVSP+YAQ EGG+GLHSTLN HSKKF+GI
Sbjct: 705 PDRMQDNSAHDRVNPVKGAIVFSNIVTTVSPTYAQEVRTSEGGRGLHSTLNSHSKKFIGI 764
Query: 758 LNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLV 809
LNGIDTDAW+PATD +LK Q+NANDLQGKAENKE++RKHLGLS AD R+PLV
Sbjct: 765 LNGIDTDAWDPATDVYLKSQFNANDLQGKAENKEALRKHLGLSYADTRRPLV 816
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356512165|ref|XP_003524791.1| PREDICTED: uncharacterized protein LOC100788308 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224055495|ref|XP_002298514.1| predicted protein [Populus trichocarpa] gi|222845772|gb|EEE83319.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|42566924|ref|NP_193558.3| starch synthase 4 [Arabidopsis thaliana] gi|122230204|sp|Q0WVX5.1|SSY4_ARATH RecName: Full=Probable starch synthase 4, chloroplastic/amyloplastic; Short=AtSS4; AltName: Full=Soluble starch synthase IV; Flags: Precursor gi|110741548|dbj|BAE98723.1| starch synthase-like protein [Arabidopsis thaliana] gi|332658615|gb|AEE84015.1| starch synthase 4 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|255557389|ref|XP_002519725.1| starch synthase, putative [Ricinus communis] gi|223541142|gb|EEF42698.1| starch synthase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|2832698|emb|CAA16796.1| starch synthase-like protein [Arabidopsis thaliana] gi|7268617|emb|CAB78826.1| starch synthase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|350538831|ref|NP_001234617.1| starch synthase IV [Solanum lycopersicum] gi|247643234|gb|ACT09058.1| starch synthase IV precursor [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
| >gi|356524929|ref|XP_003531080.1| PREDICTED: glycogen synthase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|4582783|emb|CAB40375.1| starch synthase, isoform V [Vigna unguiculata] | Back alignment and taxonomy information |
|---|
| >gi|357132826|ref|XP_003568029.1| PREDICTED: glycogen synthase-like [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 812 | ||||||
| TAIR|locus:2141936 | 1040 | SS4 "starch synthase 4" [Arabi | 0.900 | 0.702 | 0.567 | 1.2e-221 | |
| TAIR|locus:505006717 | 460 | AT5G65685 [Arabidopsis thalian | 0.487 | 0.860 | 0.316 | 2.8e-57 | |
| TIGR_CMR|GSU_3257 | 484 | GSU_3257 "glycogen synthase" [ | 0.354 | 0.595 | 0.306 | 4.7e-30 | |
| TIGR_CMR|BA_5120 | 476 | BA_5120 "glycogen synthase" [B | 0.344 | 0.588 | 0.271 | 3e-24 | |
| TIGR_CMR|GSU_1023 | 501 | GSU_1023 "glycogen synthase" [ | 0.348 | 0.564 | 0.296 | 3.6e-22 | |
| UNIPROTKB|P0A6U8 | 477 | glgA [Escherichia coli K-12 (t | 0.346 | 0.589 | 0.251 | 1.5e-14 | |
| UNIPROTKB|Q9KRB6 | 484 | glgA "Glycogen synthase" [Vibr | 0.253 | 0.425 | 0.295 | 2.6e-14 | |
| TIGR_CMR|VC_1726 | 484 | VC_1726 "glycogen synthase" [V | 0.253 | 0.425 | 0.295 | 2.6e-14 | |
| TAIR|locus:2169749 | 652 | SS1 "starch synthase 1" [Arabi | 0.188 | 0.234 | 0.349 | 1e-13 | |
| TAIR|locus:2102102 | 792 | SS2 "starch synthase 2" [Arabi | 0.355 | 0.364 | 0.276 | 2.9e-13 |
| TAIR|locus:2141936 SS4 "starch synthase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2140 (758.4 bits), Expect = 1.2e-221, P = 1.2e-221
Identities = 432/761 (56%), Positives = 544/761 (71%)
Query: 74 ADLVPTSDGDSESESSL---IDR----EPI----DVEHTEEQNLGSVFVPELKESLVLNC 122
AD VP+ D+E SS+ ID E + D++ TE S + ES+
Sbjct: 89 ADSVPSLKSDAEKGSSIHGSIDMNHADENLEKKDDIQTTEVTRRKSKTAKKKGESIHATI 148
Query: 123 DGGEELSTSQLDNLISMIRNAEKNILLLNEARVQALED--LHKILQEKEALQGEINAL-E 179
D G + LDN+ + K L LN++ + + D +++ + + I L E
Sbjct: 149 DIGHD-DGKNLDNIT--VPEVAK-ALSLNKSEGEQISDGQFGELMTMIRSAEKNILRLDE 204
Query: 180 MRLAETDARIRVAAQEKI---HVELLEDQLQKLQHELTHRGVSEHSELDVFANQNEPANE 236
R D ++ + ++ + +LE +L + + E + +++ Q E
Sbjct: 205 ARATALDDLNKILSDKEALQGEINVLEMKLSETDERIK-TAAQEKAHVELLEEQLEKLRH 263
Query: 237 DLVL---NNSEIHSFSKELDSLKTENLSLKNDIKVLKAELNSVKDADERVVXXXXXXXXX 293
+++ ++ + + SKEL++LK ENLSL+NDI++LK+EL+SVKD ERVV
Sbjct: 264 EMISPIESDGYVLALSKELETLKLENLSLRNDIEMLKSELDSVKDTGERVVVLEKECSGL 323
Query: 294 XXXXXXXXXXXXISQEDVAKLSTLKVECKDLYEKVENLQGLLAKATKQADQAISVLQQNQ 353
+SQEDV++LSTLK+EC DL+ KVE LQ LL +ATKQA+QA+ VLQQNQ
Sbjct: 324 ESSVKDLESKLSVSQEDVSQLSTLKIECTDLWAKVETLQLLLDRATKQAEQAVIVLQQNQ 383
Query: 354 ELRKKVDKLEESLDEANIYKLSSEKMQQYNELMQQKMKLLEERLQRSDEEIHSYVQLYQE 413
+LR KVDK+EESL EAN+YK SSEK+QQYNELMQ K+ LLEERL++SD EI SYVQLYQE
Sbjct: 384 DLRNKVDKIEESLKEANVYKESSEKIQQYNELMQHKVTLLEERLEKSDAEIFSYVQLYQE 443
Query: 414 SVKEFQDTLHSLKEESKKRAVHEPVDDMPWEFWSRLLLIIDGWLLEKKLSTSEAKLLREM 473
S+KEFQ+TL SLKEESKK++ EPVDDMPW++WSRLLL +DGWLLEKK+++++A LLR+M
Sbjct: 444 SIKEFQETLESLKEESKKKSRDEPVDDMPWDYWSRLLLTVDGWLLEKKIASNDADLLRDM 503
Query: 474 VWKRNGRIRDAYMECKEKNEHEAISTFLKLTSSSISSGLHVIHIAAEMAPXXXXXXXXXX 533
VWK++ RI D Y++ K+KNE +AIS FLKL SS SSGL+V+HIAAEMAP
Sbjct: 504 VWKKDRRIHDTYIDVKDKNERDAISAFLKLVSSPTSSGLYVVHIAAEMAPVAKVGGLGDV 563
Query: 534 XXXXXXXXQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEG 593
Q+KGHLVEI+LPKYDCMQYDR+ DLRALD VVESYFDG+L+KNK+W+ T+EG
Sbjct: 564 VAGLGKALQRKGHLVEIILPKYDCMQYDRVRDLRALDTVVESYFDGKLYKNKIWIGTVEG 623
Query: 594 LPVYFIEPHHPDKFFWRGQFYGEHDDXXXXXXXXXAALELLLQAGKQPDIIHCHDWQTAF 653
LPV+FIEP HP KFFWRGQFYGE DD AALELLLQ+GK+PDIIHCHDWQTAF
Sbjct: 624 LPVHFIEPQHPSKFFWRGQFYGEQDDFRRFSYFSRAALELLLQSGKKPDIIHCHDWQTAF 683
Query: 654 VAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHD 713
VAPLYWDLY PKGL+SAR+CFTCHNFEYQGTA A EL SCGLDV QLNRPDRMQD+S+ D
Sbjct: 684 VAPLYWDLYAPKGLDSARICFTCHNFEYQGTASASELGSCGLDVNQLNRPDRMQDHSSGD 743
Query: 714 RINPLKGAIVFSNIVTTVSPSYAQE-----GGQGLHSTLNFHSKKFVGILNGIDTDAWNP 768
R+NP+KGAI+FSNIVTTVSP+YAQE GG+GLHSTLNFHSKKF+GILNGIDTD+WNP
Sbjct: 744 RVNPVKGAIIFSNIVTTVSPTYAQEVRTAEGGKGLHSTLNFHSKKFIGILNGIDTDSWNP 803
Query: 769 ATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLV 809
ATD FLK Q+NA DLQGK ENK ++RK LGLSSA++R+PLV
Sbjct: 804 ATDPFLKAQFNAKDLQGKEENKHALRKQLGLSSAESRRPLV 844
|
|
| TAIR|locus:505006717 AT5G65685 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|GSU_3257 GSU_3257 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|BA_5120 BA_5120 "glycogen synthase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|GSU_1023 GSU_1023 "glycogen synthase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P0A6U8 glgA [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9KRB6 glgA "Glycogen synthase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|VC_1726 VC_1726 "glycogen synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2169749 SS1 "starch synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2102102 SS2 "starch synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| gw1.I.2314.1 | hypothetical protein (887 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
| fgenesh4_pg.C_LG_V001651 | • | • | • | 0.563 | |||||||
| eugene3.00280310 | • | • | 0.557 | ||||||||
| estExt_fgenesh4_pg.C_LG_IX1158 | • | • | • | • | 0.540 | ||||||
| fgenesh4_pm.C_LG_XIV000240 | • | • | • | 0.538 | |||||||
| gw1.V.1420.1 | • | • | 0.533 | ||||||||
| estExt_Genewise1_v1.C_LG_IV2986 | • | • | • | • | 0.525 | ||||||
| eugene3.00141188 | • | • | 0.518 | ||||||||
| estExt_fgenesh4_pm.C_LG_II0158 | • | • | 0.516 | ||||||||
| estExt_Genewise1_v1.C_LG_IX1717 | • | • | 0.512 | ||||||||
| estExt_Genewise1_v1.C_LG_VIII1252 | • | • | 0.510 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 812 | |||
| PLN02939 | 977 | PLN02939, PLN02939, transferase, transferring glyc | 0.0 | |
| TIGR02095 | 473 | TIGR02095, glgA, glycogen/starch synthase, ADP-glu | 1e-115 | |
| cd03791 | 476 | cd03791, GT1_Glycogen_synthase_DULL1_like, This fa | 1e-115 | |
| PRK00654 | 466 | PRK00654, glgA, glycogen synthase; Provisional | 1e-109 | |
| pfam08323 | 234 | pfam08323, Glyco_transf_5, Starch synthase catalyt | 1e-78 | |
| PLN02316 | 1036 | PLN02316, PLN02316, synthase/transferase | 2e-73 | |
| COG0297 | 487 | COG0297, GlgA, Glycogen synthase [Carbohydrate tra | 3e-72 | |
| PRK14099 | 485 | PRK14099, PRK14099, glycogen synthase; Provisional | 3e-35 | |
| PRK14098 | 489 | PRK14098, PRK14098, glycogen synthase; Provisional | 3e-33 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 8e-12 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 1e-11 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 9e-11 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 1e-09 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 1e-09 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-09 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-09 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 5e-09 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 6e-09 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 8e-09 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-08 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 3e-08 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 5e-08 | |
| pfam13579 | 158 | pfam13579, Glyco_trans_4_4, Glycosyl transferase 4 | 7e-08 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 2e-07 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 2e-07 | |
| pfam12718 | 143 | pfam12718, Tropomyosin_1, Tropomyosin like | 2e-07 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 3e-07 | |
| COG5185 | 622 | COG5185, HEC1, Protein involved in chromosome segr | 6e-07 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 9e-07 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 6e-06 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 8e-06 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-05 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 2e-05 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 2e-05 | |
| COG5185 | 622 | COG5185, HEC1, Protein involved in chromosome segr | 2e-05 | |
| COG1579 | 239 | COG1579, COG1579, Zn-ribbon protein, possibly nucl | 2e-05 | |
| TIGR03346 | 852 | TIGR03346, chaperone_ClpB, ATP-dependent chaperone | 4e-05 | |
| pfam12718 | 143 | pfam12718, Tropomyosin_1, Tropomyosin like | 7e-05 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 7e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-04 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 2e-04 | |
| COG1579 | 239 | COG1579, COG1579, Zn-ribbon protein, possibly nucl | 2e-04 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 3e-04 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 4e-04 | |
| TIGR00606 | 1311 | TIGR00606, rad50, rad50 | 4e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 6e-04 | |
| COG5022 | 1463 | COG5022, COG5022, Myosin heavy chain [Cytoskeleton | 6e-04 | |
| pfam07888 | 546 | pfam07888, CALCOCO1, Calcium binding and coiled-co | 7e-04 | |
| pfam07111 | 739 | pfam07111, HCR, Alpha helical coiled-coil rod prot | 8e-04 | |
| COG4372 | 499 | COG4372, COG4372, Uncharacterized protein conserve | 0.001 | |
| PRK01156 | 895 | PRK01156, PRK01156, chromosome segregation protein | 0.001 | |
| COG4942 | 420 | COG4942, COG4942, Membrane-bound metallopeptidase | 0.001 | |
| COG3096 | 1480 | COG3096, MukB, Uncharacterized protein involved in | 0.001 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 0.001 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 0.001 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 0.002 | |
| pfam10186 | 307 | pfam10186, Atg14, UV radiation resistance protein | 0.002 | |
| PRK01156 | 895 | PRK01156, PRK01156, chromosome segregation protein | 0.003 | |
| COG4372 | 499 | COG4372, COG4372, Uncharacterized protein conserve | 0.004 | |
| pfam13514 | 1118 | pfam13514, AAA_27, AAA domain | 0.004 |
| >gnl|CDD|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 1196 bits (3096), Expect = 0.0
Identities = 516/799 (64%), Positives = 611/799 (76%), Gaps = 55/799 (6%)
Query: 30 NVPLLFSSRRLLPASCKMRQRSFGSQQKRQHVKKGSPDQQRPNDADLVPTSDGDSESESS 89
P SRR L SC+ R+R F SQQK++ K +QR +++ L +D + + E++
Sbjct: 20 RAPFYLPSRRRLAVSCRARRRGFSSQQKKK-RGKNIAPKQRSSNSKLQSNTDENGQLENT 78
Query: 90 LIDREP---------------IDVEHTEEQNLGSVFVPELKESLVLNCDGGEELSTSQLD 134
+ ++ E + N GE+LS QL+
Sbjct: 79 SLRTVMELPQKSTSSDDDHNRASMQRDEAIA-------AIDNEQQTNSKDGEQLSDFQLE 131
Query: 135 NLISMIRNAEKNILLLNEARVQALEDLHKILQEKEALQGEINALEMRLAETDARIRVAAQ 194
+L+ MI+NAEKNILLLN+AR+QALEDL KIL EKEALQG+IN LEMRL+ETDARI++AAQ
Sbjct: 132 DLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGKINILEMRLSETDARIKLAAQ 191
Query: 195 EKIHVELLEDQLQKLQHELTHRGVSEHSELDVFANQNEPANEDLVLNNSEIHSFSKELDS 254
EKIHVE+LE+QL+KL++EL RG +E +HS SKELD
Sbjct: 192 EKIHVEILEEQLEKLRNELLIRGATE---------------------GLCVHSLSKELDV 230
Query: 255 LKTENLSLKNDIKVLKAELNSVKDADERVVMLEMERSSLESSLKELESKLSISQEDVAKL 314
LK EN+ LK+DI+ LKAEL V + +ERV LE ERS L++SL+ELESK ++QEDV+KL
Sbjct: 231 LKEENMLLKDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSKL 290
Query: 315 STLKVECKDLYEKVENLQGLLAKATKQADQAISVLQQNQELRKKVDKLEESLDEANIYKL 374
S L+ +C +EKVENLQ LL +AT Q ++A VL QNQ+LR KVDKLE SL EAN+ K
Sbjct: 291 SPLQYDC--WWEKVENLQDLLDRATNQVEKAALVLDQNQDLRDKVDKLEASLKEANVSKF 348
Query: 375 SSEKMQQYNELMQQKMKLLEERLQRSDEEIHSYVQLYQESVKEFQDTLHSLKEESKKRAV 434
SS K+ EL+QQK+KLLEERLQ SD EIHSY+QLYQES+KEFQDTL LKEESKKR++
Sbjct: 349 SSYKV----ELLQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEESKKRSL 404
Query: 435 HEPVDDMPWEFWSRLLLIIDGWLLEKKLSTSEAKLLREMVWKRNGRIRDAYMECKEKNEH 494
P DDMP EFWSR+LL+IDGWLLEKK+S ++AKLLREMVWKR+GRIR+AY+ CK KNE
Sbjct: 405 EHPADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKNER 464
Query: 495 EAISTFLKLTSSSISSGLHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPK 554
EA+ FLKLT S SSGLH++HIAAEMAPVAKVGGL DVV+GLGKALQKKGHLVEIVLPK
Sbjct: 465 EAVENFLKLTLSGTSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPK 524
Query: 555 YDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEGLPVYFIEPHHPDKFFWRGQFY 614
YDCMQYD+I +L+ LDVVVESYFDG LFKNK+W T+EGLPVYFIEP HP KFFWR Q+Y
Sbjct: 525 YDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPSKFFWRAQYY 584
Query: 615 GEHDDFRRFSFFSRAALELLLQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCF 674
GEHDDF+RFS+FSRAALELL Q+GK+PDIIHCHDWQTAFVAPLYWDLY PKG NSAR+CF
Sbjct: 585 GEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICF 644
Query: 675 TCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPS 734
TCHNFEYQGTAPA +LASCGLDV QL+RPDRMQDN+ H RIN +KGAIV+SNIVTTVSP+
Sbjct: 645 TCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNA-HGRINVVKGAIVYSNIVTTVSPT 703
Query: 735 YAQ----EGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENK 790
YAQ EGG+GL TL FHSKKFVGILNGIDTD WNP+TD FLKVQYNANDLQGKA NK
Sbjct: 704 YAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANK 763
Query: 791 ESIRKHLGLSSADARKPLV 809
++RK LGLSSADA +PLV
Sbjct: 764 AALRKQLGLSSADASQPLV 782
|
Length = 977 |
| >gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type | Back alignment and domain information |
|---|
| >gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >gnl|CDD|234809 PRK00654, glgA, glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|219794 pfam08323, Glyco_transf_5, Starch synthase catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|215180 PLN02316, PLN02316, synthase/transferase | Back alignment and domain information |
|---|
| >gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|237610 PRK14099, PRK14099, glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|172588 PRK14098, PRK14098, glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|222237 pfam13579, Glyco_trans_4_4, Glycosyl transferase 4-like domain | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|205039 pfam12718, Tropomyosin_1, Tropomyosin like | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|227512 COG5185, HEC1, Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|227512 COG5185, HEC1, Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224495 COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|234173 TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB | Back alignment and domain information |
|---|
| >gnl|CDD|205039 pfam12718, Tropomyosin_1, Tropomyosin like | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224495 COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|129694 TIGR00606, rad50, rad50 | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|116500 pfam07888, CALCOCO1, Calcium binding and coiled-coil domain (CALCOCO1) like | Back alignment and domain information |
|---|
| >gnl|CDD|148617 pfam07111, HCR, Alpha helical coiled-coil rod protein (HCR) | Back alignment and domain information |
|---|
| >gnl|CDD|226809 COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|100796 PRK01156, PRK01156, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|225638 COG3096, MukB, Uncharacterized protein involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|220623 pfam10186, Atg14, UV radiation resistance protein and autophagy-related subunit 14 | Back alignment and domain information |
|---|
| >gnl|CDD|100796 PRK01156, PRK01156, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|226809 COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|205692 pfam13514, AAA_27, AAA domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 812 | |||
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 100.0 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 100.0 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.69 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.66 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 99.66 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.61 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.61 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.57 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 99.56 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.56 | |
| PLN00142 | 815 | sucrose synthase | 99.55 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.49 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.48 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.48 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.47 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.41 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.4 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.3 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.27 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.26 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.22 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 99.2 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.16 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.14 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.12 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.11 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 99.1 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.09 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.09 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.07 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.06 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.06 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.06 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 99.05 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.03 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 99.03 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.01 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 98.99 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.95 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 98.94 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 98.93 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 98.89 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.89 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 98.87 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 98.86 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 98.85 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 98.82 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.82 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 98.81 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 98.8 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 98.8 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 98.75 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 98.73 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 98.73 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 98.71 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.7 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 98.69 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 98.68 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.67 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 98.65 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 98.57 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 98.46 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 98.33 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 98.18 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.16 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.06 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 97.83 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 97.81 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 97.79 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 97.7 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 97.59 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 97.41 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 97.4 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 97.36 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 97.36 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 97.33 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 97.33 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 97.32 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 97.31 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 97.28 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 97.23 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 97.15 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 97.06 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 97.05 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 96.95 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 96.94 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 96.86 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 96.85 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 96.78 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 96.74 | |
| PF11897 | 118 | DUF3417: Protein of unknown function (DUF3417); In | 96.73 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 96.7 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 96.63 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 96.62 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 96.61 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 96.56 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 96.4 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 96.35 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 96.34 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 96.29 | |
| PRK11637 | 428 | AmiB activator; Provisional | 96.28 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 96.25 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 96.22 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 96.22 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 96.2 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 96.15 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 95.93 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 95.91 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 95.85 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 95.85 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 95.75 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 95.7 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 95.69 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 95.66 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 95.65 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 95.64 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 95.57 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 95.57 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 95.5 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 95.3 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 95.26 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 95.24 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 95.19 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 95.13 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 95.02 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 94.94 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 94.85 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 94.82 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 94.76 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 94.63 | |
| PF06160 | 560 | EzrA: Septation ring formation regulator, EzrA ; I | 94.58 | |
| PF05622 | 713 | HOOK: HOOK protein; InterPro: IPR008636 This famil | 94.48 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 94.47 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 94.45 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 94.44 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 94.44 | |
| PF15294 | 278 | Leu_zip: Leucine zipper | 94.29 | |
| COG0419 | 908 | SbcC ATPase involved in DNA repair [DNA replicatio | 94.27 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 94.22 | |
| PF05557 | 722 | MAD: Mitotic checkpoint protein; InterPro: IPR0086 | 94.2 | |
| PRK09039 | 343 | hypothetical protein; Validated | 94.1 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 94.04 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 93.98 | |
| PRK11637 | 428 | AmiB activator; Provisional | 93.91 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 93.91 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 93.88 | |
| PF05557 | 722 | MAD: Mitotic checkpoint protein; InterPro: IPR0086 | 93.8 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 93.79 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 93.76 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 93.72 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 93.71 | |
| PF05622 | 713 | HOOK: HOOK protein; InterPro: IPR008636 This famil | 93.7 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 93.62 | |
| PLN03229 | 762 | acetyl-coenzyme A carboxylase carboxyl transferase | 93.57 | |
| KOG0249 | 916 | consensus LAR-interacting protein and related prot | 93.4 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 93.31 | |
| TIGR00634 | 563 | recN DNA repair protein RecN. All proteins in this | 93.29 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 93.1 | |
| COG0419 | 908 | SbcC ATPase involved in DNA repair [DNA replicatio | 92.83 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 92.73 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 92.69 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 92.68 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 92.66 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 92.63 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 92.59 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 92.52 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 92.19 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 92.15 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 92.05 | |
| PRK10929 | 1109 | putative mechanosensitive channel protein; Provisi | 92.05 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 92.01 | |
| TIGR03007 | 498 | pepcterm_ChnLen polysaccharide chain length determ | 91.88 | |
| PF15397 | 258 | DUF4618: Domain of unknown function (DUF4618) | 91.79 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 91.52 | |
| PF09787 | 511 | Golgin_A5: Golgin subfamily A member 5; InterPro: | 91.44 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 91.09 | |
| PF14915 | 305 | CCDC144C: CCDC144C protein coiled-coil region | 91.04 | |
| KOG0978 | 698 | consensus E3 ubiquitin ligase involved in syntaxin | 90.92 | |
| KOG0978 | 698 | consensus E3 ubiquitin ligase involved in syntaxin | 90.82 | |
| TIGR03007 | 498 | pepcterm_ChnLen polysaccharide chain length determ | 90.78 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 90.74 | |
| PF04912 | 388 | Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamit | 90.69 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 90.68 | |
| KOG4809 | 654 | consensus Rab6 GTPase-interacting protein involved | 90.66 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 90.52 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 90.49 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 90.31 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 90.29 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 90.17 | |
| PF09728 | 309 | Taxilin: Myosin-like coiled-coil protein; InterPro | 90.14 | |
| PF13514 | 1111 | AAA_27: AAA domain | 89.77 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 89.6 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 89.6 | |
| PF01496 | 759 | V_ATPase_I: V-type ATPase 116kDa subunit family ; | 89.51 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 89.46 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 89.43 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 89.39 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 89.33 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 89.28 | |
| PLN03229 | 762 | acetyl-coenzyme A carboxylase carboxyl transferase | 89.12 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 89.12 | |
| PRK10929 | 1109 | putative mechanosensitive channel protein; Provisi | 88.79 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 88.64 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 88.48 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 88.48 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 88.47 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 88.33 | |
| TIGR03017 | 444 | EpsF chain length determinant protein EpsF. Sequen | 88.21 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 87.97 | |
| PRK09039 | 343 | hypothetical protein; Validated | 87.48 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 87.3 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 87.24 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 87.04 | |
| PF09787 | 511 | Golgin_A5: Golgin subfamily A member 5; InterPro: | 86.95 | |
| cd07627 | 216 | BAR_Vps5p The Bin/Amphiphysin/Rvs (BAR) domain of | 86.89 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 86.78 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 86.51 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 85.89 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 85.64 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 85.59 | |
| cd07623 | 224 | BAR_SNX1_2 The Bin/Amphiphysin/Rvs (BAR) domain of | 85.22 | |
| PF05010 | 207 | TACC: Transforming acidic coiled-coil-containing p | 85.19 | |
| PF10186 | 302 | Atg14: UV radiation resistance protein and autopha | 85.16 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 85.12 | |
| cd07647 | 239 | F-BAR_PSTPIP The F-BAR (FES-CIP4 Homology and Bin/ | 84.99 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 84.46 | |
| COG4717 | 984 | Uncharacterized conserved protein [Function unknow | 84.39 | |
| KOG4302 | 660 | consensus Microtubule-associated protein essential | 84.34 | |
| PF05483 | 786 | SCP-1: Synaptonemal complex protein 1 (SCP-1); Int | 84.26 | |
| TIGR01000 | 457 | bacteriocin_acc bacteriocin secretion accessory pr | 84.21 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 84.13 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 84.13 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 83.72 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 83.27 | |
| COG4913 | 1104 | Uncharacterized protein conserved in bacteria [Fun | 83.2 | |
| cd00176 | 213 | SPEC Spectrin repeats, found in several proteins i | 83.14 | |
| PRK10246 | 1047 | exonuclease subunit SbcC; Provisional | 83.06 | |
| KOG3156 | 220 | consensus Uncharacterized membrane protein [Functi | 82.98 | |
| PF06705 | 247 | SF-assemblin: SF-assemblin/beta giardin | 82.85 | |
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 82.4 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 82.24 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 81.62 | |
| PF05278 | 269 | PEARLI-4: Arabidopsis phospholipase-like protein ( | 81.17 | |
| PF04012 | 221 | PspA_IM30: PspA/IM30 family; InterPro: IPR007157 T | 81.04 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 80.74 | |
| TIGR03017 | 444 | EpsF chain length determinant protein EpsF. Sequen | 80.7 |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-199 Score=1731.42 Aligned_cols=773 Identities=68% Similarity=1.050 Sum_probs=720.2
Q ss_pred CCcccccccccCcceeecccCCCCcCcccccccccccccccccccccccCCCchhHHhhhcccCCCCCCCCCCCCCccCC
Q 003536 1 MASKISTSFISPFVIHFNCKNSNNKNKHLNVPLLFSSRRLLPASCKMRQRSFGSQQKRQHVKKGSPDQQRPNDADLVPTS 80 (812)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~k~~~~k~~~~~~~~~~~~~~~~~~ 80 (812)
||.+.++||++|||+++.| +.+||+|+||++|+||+||||+|||||||||+|+++|+| ||+|++||+|+
T Consensus 1 ~~~~~~~~~l~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 69 (977)
T PLN02939 1 AAAAESAALLSHGCGPIRS----------RAPFYLPSRRRLAVSCRARRRGFSSQQKKKRGKNIAPKQ-RSSNSKLQSNT 69 (977)
T ss_pred CchhhhhhHhhcccccccc----------CCCCCCchhccccccccccCCCchhhhhhhhccCCCCcc-cccccccccCc
Confidence 5778899999999998844 679999999999999999999999999999999999998 99999999999
Q ss_pred CCCCcccccccCC--CCC-Ccccccccccc-cccccccccccc----cccCCCccccccchhHHHHHHHhhhhhHHHHHH
Q 003536 81 DGDSESESSLIDR--EPI-DVEHTEEQNLG-SVFVPELKESLV----LNCDGGEELSTSQLDNLISMIRNAEKNILLLNE 152 (812)
Q Consensus 81 d~~~~~e~~~~~~--~~~-~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (812)
|||+|+|++++++ +.| +.|+.+.+.+. +.+.++.+.+.. -+..+|+|+|++|||||+|||||||||||||||
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (977)
T PLN02939 70 DENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDFQLEDLVGMIQNAEKNILLLNQ 149 (977)
T ss_pred cccccccccccccccccccCCCCccccccchhhcchhhhccccHhhhhccccccccccccHHHHHHHHHHHHhhhHhHHH
Confidence 9999999999996 444 55555544443 345555444433 367789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHhhhhchhhhhhHhhhhhhhHhhhHHHHHHHHHHhhhcccCcccchhhhhcCCC
Q 003536 153 ARVQALEDLHKILQEKEALQGEINALEMRLAETDARIRVAAQEKIHVELLEDQLQKLQHELTHRGVSEHSELDVFANQNE 232 (812)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (812)
||++||+||+|||+|||+|||+||||||||||||+|+|+++|+++||||+|+|||||||||+++++++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 219 (977)
T PLN02939 150 ARLQALEDLEKILTEKEALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQLEKLRNELLIRGATEGL---------- 219 (977)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhhhhhhhhhhhhccccchhhHHHHHHHhhhhhcccccccc----------
Confidence 9999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CcccccccCCcccchhhHhhhhhhhhhhcchhHHHHHHHHhhhhhhhhhHHHHHHhhhhhHHhhHHHHHhhhhcchhhhh
Q 003536 233 PANEDLVLNNSEIHSFSKELDSLKTENLSLKNDIKVLKAELNSVKDADERVVMLEMERSSLESSLKELESKLSISQEDVA 312 (812)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (812)
.+|+|++||++||+|||+||+||++||++|++|++|+||+++|||||++|+++|+|||+||++||+||+
T Consensus 220 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (977)
T PLN02939 220 -----------CVHSLSKELDVLKEENMLLKDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEDVS 288 (977)
T ss_pred -----------ccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 577999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHHHhhhhhhHHHHhhhhHHHHHHHHHHHHHHhHhhhhhhchHHHHHHHHHHHHHHHH
Q 003536 313 KLSTLKVECKDLYEKVENLQGLLAKATKQADQAISVLQQNQELRKKVDKLEESLDEANIYKLSSEKMQQYNELMQQKMKL 392 (812)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (812)
||+||++|| |||||||||+||++||||+|+|++||+||||||+|||+||+||+|||+||+||+++ ++||||||+
T Consensus 289 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 362 (977)
T PLN02939 289 KLSPLQYDC--WWEKVENLQDLLDRATNQVEKAALVLDQNQDLRDKVDKLEASLKEANVSKFSSYKV----ELLQQKLKL 362 (977)
T ss_pred hccchhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHhhHhhhhHHHH----HHHHHHHHH
Confidence 999999998 99999999999999999999999999999999999999999999999999999977 999999999
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHhhHHhhhhhccCCCCCCCCHHHHHHHHhcchhhhHHhhcCcHHHHHHHH
Q 003536 393 LEERLQRSDEEIHSYVQLYQESVKEFQDTLHSLKEESKKRAVHEPVDDMPWEFWSRLLLIIDGWLLEKKLSTSEAKLLRE 472 (812)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~lLL~id~~~l~~~~~~~e~~~l~~ 472 (812)
+|+|||+||+||+||+++|+++|++||++|++|++|++++++++|+++|||+|||+||||||+|+|+++|+.+||+.||+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~id~~~~~~~~~~~~a~~lr~ 442 (977)
T PLN02939 363 LEERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEESKKRSLEHPADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLRE 442 (977)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccCchhhCCHHHHHHHHHHHHHHHHhccCChhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCcchhHhhhhhhhhhhhhHHhhhhccCCCCCCCCeEEEEecccCCcccCCCHHHHHHHHHHHHHHCCCeEEEEe
Q 003536 473 MVWKRNGRIRDAYMECKEKNEHEAISTFLKLTSSSISSGLHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVL 552 (812)
Q Consensus 473 ~v~~~~~~~~d~y~~~~~~~~~e~~~~~~~~~~~~~~~~MKIL~ISsE~aP~aKvGGLGdVV~~LsKALqklGheV~VIt 552 (812)
+||+|+.++.++|+++++..++|++++|++++.+++.++|||+|||+|++|++|+||||+||++||+||+++||+|.||+
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIl 522 (977)
T PLN02939 443 MVWKRDGRIREAYLSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVL 522 (977)
T ss_pred HHHhhhhhHHHHHHHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccccccccceeEEEeeecCCceeeeEEEEEeeCCeeEEEeCCCCCCCCCcCCCCCCCCchHHHHHHHHHHHHH
Q 003536 553 PKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFRRFSFFSRAALE 632 (812)
Q Consensus 553 PkY~~i~~~~i~~L~gv~V~V~s~fdG~~~~~~Vw~~~v~GV~VYfLd~~~ps~~F~R~~lYG~~Dd~~RfifFsrAaLe 632 (812)
|+|+++....+..+......+.++++|..+.++||.+.++||++|||++++|+.||+|+.+||+.||+.||+|||+|+++
T Consensus 523 P~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~~fF~R~~iYg~~Dn~~RF~~FsrAaLe 602 (977)
T PLN02939 523 PKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALE 602 (977)
T ss_pred CCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCchhccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 99999875433333333334455677777789999999999999999986665699999999999999999999999999
Q ss_pred HHHHcCCCCCEEEEcCcccchHHHHHHHHhccCCCCCCcEEEEecCCccCCCCChhhhhhcCCCcccccCCcccccCCCC
Q 003536 633 LLLQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAH 712 (812)
Q Consensus 633 lLkklg~kPDIIH~HDWhTA~Vapl~lk~y~~~gl~~iPvVfTIHNleyqG~f~~~~L~~~GLp~e~f~~~D~led~~~~ 712 (812)
++.+.+++||||||||||||+++|++++.|...++.++|+||||||+.|||.|+...+..||+|+++|.++++++++ ++
T Consensus 603 ~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~-~~ 681 (977)
T PLN02939 603 LLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDN-AH 681 (977)
T ss_pred HHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhc-cC
Confidence 99998999999999999999998888877766667789999999999999999988888899999988778888754 57
Q ss_pred CchhHHHHHHHHcCcEEecCcchhhh----hccCcccccccCCCCeEEEeCCCCCCCCCCCCchhhhhccCcCCccchHH
Q 003536 713 DRINPLKGAIVFSNIVTTVSPSYAQE----GGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAE 788 (812)
Q Consensus 713 ~~vNllK~AI~~AD~VITVSptyAeE----~G~GL~~lL~~~~eKI~gIpNGID~d~WnP~tDk~L~~~Ys~ddl~gK~~ 788 (812)
+++|++|+|+.+||+||||||+|++| +|+||+++++.+..|++||+||||++.|+|.+|++|+.+|++++|+||..
T Consensus 682 ~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~ 761 (977)
T PLN02939 682 GRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAA 761 (977)
T ss_pred CchHHHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhh
Confidence 88999999999999999999999999 78899999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhCCCCCCCCCCEEEEc
Q 003536 789 NKESIRKHLGLSSADARKPLVKFT 812 (812)
Q Consensus 789 nK~aLqk~lGL~~~d~d~PLVGfI 812 (812)
||.+|++++||+..+++.|+||||
T Consensus 762 nK~aLRkelGL~~~d~d~pLIg~V 785 (977)
T PLN02939 762 NKAALRKQLGLSSADASQPLVGCI 785 (977)
T ss_pred hhHHHHHHhCCCcccccceEEEEe
Confidence 999999999999534678999997
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >PF11897 DUF3417: Protein of unknown function (DUF3417); InterPro: IPR024517 This domain of unknown function is found at the N terminus of members of the glycogen phosphorylase family | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site | Back alignment and domain information |
|---|
| >PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >PF15294 Leu_zip: Leucine zipper | Back alignment and domain information |
|---|
| >COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins | Back alignment and domain information |
|---|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional | Back alignment and domain information |
|---|
| >KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >TIGR00634 recN DNA repair protein RecN | Back alignment and domain information |
|---|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
| >COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PRK10929 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >PF15397 DUF4618: Domain of unknown function (DUF4618) | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >PF14915 CCDC144C: CCDC144C protein coiled-coil region | Back alignment and domain information |
|---|
| >KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF04912 Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamitin is a subunit of the microtubule-dependent motor complex, it is also implicated in cell adhesion by binding to macrophage-enriched myristoylated alanine-rice C kinase substrate (MacMARCKS) [] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed | Back alignment and domain information |
|---|
| >PF13514 AAA_27: AAA domain | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >PF01496 V_ATPase_I: V-type ATPase 116kDa subunit family ; InterPro: IPR002490 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK10929 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR03017 EpsF chain length determinant protein EpsF | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
| >PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure | Back alignment and domain information |
|---|
| >cd07627 BAR_Vps5p The Bin/Amphiphysin/Rvs (BAR) domain of yeast Sorting Nexin Vps5p | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >cd07623 BAR_SNX1_2 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins 1 and 2 | Back alignment and domain information |
|---|
| >PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules | Back alignment and domain information |
|---|
| >PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd07647 F-BAR_PSTPIP The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Proline-Serine-Threonine Phosphatase-Interacting Proteins | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >COG4717 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex | Back alignment and domain information |
|---|
| >TIGR01000 bacteriocin_acc bacteriocin secretion accessory protein | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >COG4913 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here | Back alignment and domain information |
|---|
| >PRK10246 exonuclease subunit SbcC; Provisional | Back alignment and domain information |
|---|
| >KOG3156 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >PF06705 SF-assemblin: SF-assemblin/beta giardin | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PF05278 PEARLI-4: Arabidopsis phospholipase-like protein (PEARLI 4); InterPro: IPR007942 This family contains several phospholipase-like proteins from Arabidopsis thaliana and other members of the Streptophyta which are homologous to PEARLI 4 | Back alignment and domain information |
|---|
| >PF04012 PspA_IM30: PspA/IM30 family; InterPro: IPR007157 This family includes PspA a protein that suppresses sigma54-dependent transcription | Back alignment and domain information |
|---|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
| >TIGR03017 EpsF chain length determinant protein EpsF | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 812 | ||||
| 1rzu_A | 485 | Crystal Structure Of The Glycogen Synthase From A. | 7e-19 | ||
| 3vue_A | 536 | Crystal Structure Of Rice Granule Bound Starch Synt | 5e-18 | ||
| 1rzv_A | 485 | Crystal Structure Of The Glycogen Synthase From Agr | 3e-17 | ||
| 3d1j_A | 477 | Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408 | 4e-16 | ||
| 2qzs_A | 485 | Crystal Structure Of Wild-Type E.Coli Gs In Complex | 5e-16 | ||
| 3cop_A | 485 | Crystal Structure Of E.Coli Gs Mutant E377a In Comp | 5e-16 | ||
| 3fro_A | 439 | Crystal Structure Of Pyrococcus Abyssi Glycogen Syn | 8e-04 | ||
| 3l01_A | 428 | Crystal Structure Of Monomeric Glycogen Synthase Fr | 8e-04 | ||
| 2bis_A | 440 | Structure Of Glycogen Synthase From Pyrococcus Abys | 9e-04 |
| >pdb|1RZU|A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp Length = 485 | Back alignment and structure |
|
| >pdb|3VUE|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain Length = 536 | Back alignment and structure |
| >pdb|1RZV|A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) Length = 485 | Back alignment and structure |
| >pdb|3D1J|A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408s) Length = 477 | Back alignment and structure |
| >pdb|2QZS|A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) Length = 485 | Back alignment and structure |
| >pdb|3COP|A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso Length = 485 | Back alignment and structure |
| >pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439 | Back alignment and structure |
| >pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428 | Back alignment and structure |
| >pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 812 | |||
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 1e-114 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 1e-113 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 1e-100 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 2e-17 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 1e-15 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 3e-12 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 3e-08 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 2e-16 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-06 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 3e-13 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 4e-12 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 4e-10 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 5e-10 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 2e-09 | |
| 1c1g_A | 284 | Tropomyosin; contractIle protein; 7.00A {Sus scrof | 3e-07 | |
| 1c1g_A | 284 | Tropomyosin; contractIle protein; 7.00A {Sus scrof | 3e-05 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 4e-07 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 7e-07 | |
| 2xs1_A | 704 | Programmed cell death 6-interacting protein; prote | 9e-07 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 3e-06 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 7e-06 | |
| 4dvy_P | 877 | Cytotoxicity-associated immunodominant antigen; on | 7e-06 | |
| 3haj_A | 486 | Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, | 1e-04 | |
| 3r6n_A | 450 | Desmoplakin; spectrin repeat, SH3 domain, cell adh | 2e-04 | |
| 4dvz_A | 569 | Cytotoxicity-associated immunodominant antigen; on | 3e-04 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 8e-04 | |
| 1g8x_A | 1010 | Myosin II heavy chain fused to alpha-actinin 3; mo | 8e-04 |
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Length = 485 | Back alignment and structure |
|---|
Score = 354 bits (912), Expect = e-114
Identities = 81/311 (26%), Positives = 130/311 (41%), Gaps = 29/311 (9%)
Query: 512 LHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDV 571
+ V+H+ +EM P+ K GGL DV+ L A G ++LP + ++ D
Sbjct: 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRR------GVTDA 54
Query: 572 VVESYFDGRLFKNKVWVSTIEGLPVYFIEPHH----PDKFFWRGQFYGEHDDFRRFSFFS 627
V S D + G+ +Y I+ H P + + D+ RF+
Sbjct: 55 QVVSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLG 114
Query: 628 RAALELL--LQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTA 685
E+ L +PD++H HDW P A+ FT HN YQG
Sbjct: 115 WVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRP-----AKSVFTVHNLAYQGMF 169
Query: 686 PAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQE-----GG 740
A + L ++ + +I+ LK + +++ +T VSP+YA+E
Sbjct: 170 YAHHMNDIQLP-WSFFNIHGLEF---NGQISFLKAGLYYADHITAVSPTYAREITEPQFA 225
Query: 741 QGLHSTLNF--HSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLG 798
G+ L + G+LNG+D W+P TD L +Y + L+ KAENK ++ +G
Sbjct: 226 YGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMG 285
Query: 799 LSSADARKPLV 809
L D + PL
Sbjct: 286 L-KVDDKVPLF 295
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Length = 485 | Back alignment and structure |
|---|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} PDB: 2bis_A* 3l01_A* Length = 439 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200 | Back alignment and structure |
|---|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
| >2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A Length = 704 | Back alignment and structure |
|---|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
| >4dvy_P Cytotoxicity-associated immunodominant antigen; oncoprotein; 3.30A {Helicobacter pylori} Length = 877 | Back alignment and structure |
|---|
| >3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens} Length = 486 | Back alignment and structure |
|---|
| >3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} Length = 450 | Back alignment and structure |
|---|
| >4dvz_A Cytotoxicity-associated immunodominant antigen; oncoprotein; 3.19A {Helicobacter pylori} Length = 569 | Back alignment and structure |
|---|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
| >1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 812 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 1e-58 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 1e-30 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 205 bits (521), Expect = 1e-58
Identities = 84/312 (26%), Positives = 140/312 (44%), Gaps = 30/312 (9%)
Query: 513 HVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVV 572
+V+ +++E+ P+ K GGL DVV L AL+ G ++P Y ++ D ++ +
Sbjct: 2 NVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFE-- 59
Query: 573 VESYFDGRLFKNKVWVSTIEGLPVYFIEPHHPDKFFWRGQFYG------EHDDFRRFSFF 626
+ D K + E L + ++ P + G Y D+++RF+
Sbjct: 60 ---FTDLLGEKADLLEVQHERLDLLILD--APAYYERSGGPYLGQTGKDYPDNWKRFAAL 114
Query: 627 SRAALELL--LQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGT 684
S AA + + G +PD++H HDWQ A P+ T HN +QG
Sbjct: 115 SLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPE----IPSLLTIHNIAFQGQ 170
Query: 685 APAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQE-----G 739
A + L M+ ++ ++ LKG + + ++TVSPSYA+E
Sbjct: 171 FGANIFSKLALPAHAFG----MEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEF 226
Query: 740 GQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGL 799
G GL + + GI+NGID D WNPATD + Y+A +L+ +A NK+++ +H +
Sbjct: 227 GMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRI 286
Query: 800 SSADARKPLVKF 811
PL
Sbjct: 287 DDDG--SPLFCV 296
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 812 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.93 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 99.75 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 99.6 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 99.57 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 98.63 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 96.12 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 87.87 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 81.37 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=1.4e-36 Score=284.17 Aligned_cols=283 Identities=30% Similarity=0.509 Sum_probs=220.4
Q ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEE
Q ss_conf 74999963128865679779999999999997899499990388854200113553113898641388414557999866
Q 003536 512 LHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTI 591 (812)
Q Consensus 512 MKIL~ISaE~aPiaKvGGLG~VV~dLsKALakkGheV~VItPkY~~i~~e~v~~L~gi~V~V~s~f~G~~~~~~Vw~g~V 591 (812)
|||+|||+|++|++++||+|+||++||++|+++||+|+||+|.|++++......+ .+. .+.........++....
T Consensus 1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~ 75 (477)
T d1rzua_ 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPV---KCF--EFTDLLGEKADLLEVQH 75 (477)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCE---EEE--EESCSSSCCEEEEEEEE
T ss_pred CEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCE---EEE--EEECCCCCEEEEEEEEE
T ss_conf 9899997722063326768999999999999769969999669853446525665---899--97146785478999998
Q ss_pred CCEEEEEECCCCCCCCCCC-CCCC------CCCCHHHHHHHHHHHHHHHHHHC--CCCCCEEEECCCCCCHHHHHHHHHH
Q ss_conf 8934999389999987767-9998------99754889999999999999972--9999899975762000799999873
Q 003536 592 EGLPVYFIEPHHPDKFFWR-GQFY------GEHDDFRRFSFFSRAALELLLQA--GKQPDIIHCHDWQTAFVAPLYWDLY 662 (812)
Q Consensus 592 ~GI~VylIdp~~ps~fF~R-~~lY------g~~DD~~Rfi~FsrAvLe~Lkql--g~kPDIIHiHDWhSAlVapLllk~y 662 (812)
.|+++|+++++ . +|.| +.+| .++|++.++..|++++.+++... +++|||||+|+|+++++ +.++..
T Consensus 76 ~~v~~~~l~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~-~~~~~~- 150 (477)
T d1rzua_ 76 ERLDLLILDAP--A-YYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMT-PVYMRY- 150 (477)
T ss_dssp TTEEEEEEECH--H-HHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTH-HHHHHH-
T ss_pred CCEEEEEECCH--H-HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHH-HHHHHH-
T ss_conf 99159995582--4-304678735576665665218899999988776653025688888799336067788-999998-
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHH----
Q ss_conf 5589999868997049966788890336523999000169765456888884059999998769388468112664----
Q 003536 663 VPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQE---- 738 (812)
Q Consensus 663 a~~Gl~~iPiVfTIHNleyqG~~p~~kL~~lGL~~e~l~~pDrlqD~~~~~~INllK~AI~~AD~VITVSpsyAeE---- 738 (812)
.. ..++|+|+|+|+..+++.++...+..++.+...+... +..+...+++++.++.+||.+++||+.|+++
T Consensus 151 ~~--~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~ 224 (477)
T d1rzua_ 151 AE--TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGME----GIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTA 224 (477)
T ss_dssp SS--SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTT----TTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSH
T ss_pred HH--CCCCCEEEEEECCCCCCCCCHHHHHHHHCCHHHCCCC----CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 54--7898889998324423467888998862114440654----43432056899988776444213119999999987
Q ss_pred -HCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEC
Q ss_conf -11686333256899849985799899989898412331069677002299699999990999999999989986
Q 003536 739 -GGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVKFT 812 (812)
Q Consensus 739 -~g~GL~~iL~~~~~KI~vIpNGID~e~w~P~~D~~L~~~Y~~ddl~gK~~nK~aLqk~lGL~~~d~~~PLVG~V 812 (812)
++.+.+.+......++.+|+||+|++.|+|..++.|+..+..+...++..++.++++..+++. ++.|+++|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~v 297 (477)
T d1rzua_ 225 EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDD--DGSPLFCVI 297 (477)
T ss_dssp HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCC--SSSCEEEEE
T ss_pred HCCCCHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC--CCCCEEEEE
T ss_conf 5475366566651564799978934012056645333333104567776663899887414466--786389998
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| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
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| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
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| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
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| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
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