Citrus Sinensis ID: 003559


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-
MSSTTPILHQNNHHQHRLLFSFTSKTTPFHSLHSLHFKRKPLLSFSSSYSASSSSQQHQSITRVSTAPVEYAPPPPDFNFHQEISRLKKLRSRLAVSQSLSHKLSVLDSDSRLKNFFNDKHSNYFARVLASLNLDQLFLIKCVIAAGQEHVLNLEPEYVESEARSDIKSALYALVEFIDRLDVNGRNSEAKDAVLEIEQVKDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLAQSKFERKTTKSQHVHESMECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQVRFT
ccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccEEccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHcccccHHHHHHHccccccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHccccccccEEEEEcccccccccccccccccEEccccccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHHHccccccccccEEEEEcccEEEEEccccccccccccccccccccccHHHHHHHHccHHHHHHHcccEEEEEEEcccccccccHHHHHHHHHHHcccccEEEEEEEEcccccccEEEEEEEEcccccccccEEEEEEcccccccccccccccccccccccccEEEEEEEHHHHHHHcccccccccccEEEccccccccccccccEEEcccccHHHHHHHHHHHHHccccccccccccccccccEEEcccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccccEEccccccEEEEcccccccHHHHHccccccccccccEEEEEEcEEEEEEEEEEEEEEEEEEccccccEEcccccEEEEccccccEEEEEcEEEEcccEEcccccccccccccEEEEEEEEEEEcccEEEEccEEEEEEcc
cccccHHHEcccccccEEEEEEEccccccccccccccccccccccccccccccccccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHcccccccHHHHHHcccccHEEEEHHEEHcccccEEEccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHcHHccHHcEEEEEcccccHHcccccccccccccHHHccHccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEccccccHHHHHHHHHHccccccccccEEEEEccccEEEEcccccEEEccccEEEEcccccHHHHHHHHHccHHHHHHHcccEEEEEEEccccEEEccccHHHHHHHcccccccccEEEEEccccccHcEEEEEEEEcccccEEEEEEEEEEEcccHcccccccccccccccccccccEEEEEEcHHHHHHcccccccccccEEEEccccccEEccccccccccccHHHHHHHcHHHHHHcccccccccccHHHccEEEEEcccccccHHHHHcccccccccccccccHHHHHHHHHHHHHHHccccccccccccEEEcccccEEEEEccccHHHHHHHHHHccccEEccccEEEEEEEEEEEEEEEEccEEEEEEcccccccEEcccccEEEEEcccccEEEEEEEEEEEccEEccccccEEEEEcEEEEEEEEEEEEcccEEEEccEEEEEEEc
mssttpilhqnnhhqhrllfsftskttpfhslhslhfkrkpllsfsssysassssqqhqsitrvstapveyappppdfnfHQEISRLKKLRSRLAVSQSLShklsvldsdsrlknffndkHSNYFARVLASLNLDQLFLIKCVIAAGQehvlnlepeyvesEARSDIKSALYALVEFIDrldvngrnseakDAVLEIEQVKDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLAQSKferkttksqhvhesmecqfleihvpsgldlsqnTEYAAQAALWGieglpelgeiyplggsadrlglvdhetgeclpaamlpyCGRTLLEGLIRDLQAREFLYFKLygkqcitpvAIMTSSAKNNHERITSLCERLRwfgrgqssfqlfeqplvpavdaedgqwlvmrpfapvckpgghgaIWKLAHDKGIFKwfhdngrkgatvRQVSNVVAATDLTLLALAGIglhhgkklgfasckrssgateGINVLIEKknldgkwayglscieytefdkfgitrgpfssnglqadfpantniLYVDLASaelvgssenerslpgmvlntkkpivymdnfgdthsvpggrleCTMQNIADNFLNTYSSrcykgveddldtfmVYNERRRVTSSAKKKRkradmslhqtpdgsfLDILRNAYDILCQChiklpeiegndkyiddgppyliLLHPALGLLWEVTRqkfkggsvskgseLQIEVAEFLWRNVQLDGSLIIVAENvmgstriadngESILQYGyrcgrcklnnvkvlnkgidwdcgdntywkHDVQWFEALKVILHGnaefeasdvTLQVRFT
mssttpilhqnnhHQHRLLFSFTSKTTPFHSLHSLHFKRKPLLSFSSSYSASSSSQQHQSITRVSTAPVEYAPPPPDFNFHQEISRLKKLRSRLAVSqslshklsvldsdsrLKNFFNDKHSNYFARVLASLNLDQLFLIKCVIAAGQEHVLNLEPEYVESEARSDIKSALYALVEFIDRLDVNGRNSEAkdavleieqvKDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLAQSKFERKTTKSQHVHESMECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLiekknldgkwAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELVgssenerslpgmvlNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVeddldtfmvynerrrvtssakkkrkradmslhqtpdgsfLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAefeasdvtlqvrft
MSSTTPILhqnnhhqhRLLFSFTSKTTPFHSLHSLHFKRKPLLsfsssysassssqqhqsITRVSTAPVEYAPPPPDFNFHQEISRLKKLRSRLAVSQSLSHKLSVLDSDSRLKNFFNDKHSNYFARVLASLNLDQLFLIKCVIAAGQEHVLNLEPEYVESEARSDIKSALYALVEFIDRLDVNGRNSEAKDAVLEIEQVKDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLAQSKFERKTTKSQHVHESMECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVaatdltllalaGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQVRFT
***************HRLLFSFTSKTTPFHSLHSLHF**************************************************************************RLKNFFNDKHSNYFARVLASLNLDQLFLIKCVIAAGQEHVLNLEPEYVESEARSDIKSALYALVEFIDRLDVNGRNSEAKDAVLEIEQVKDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLAQSKF*********VHESMECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELV**********GMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYN**************************SFLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTL*****
*****PI**QNNHHQHRLLFSFTSKTTPFHSLHSLHFKRKP******************************************ISRLKKL****************LDSDSRLKNFFNDK****FARVLASLNLDQLFLIKCVIAAGQEHVLNLEPEYV***********LYALVEFIDRLDV*****************KDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLA**********************************QNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDK***********GLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTS***************TPDGSFLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKF****VSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQVR**
MSSTTPILHQNNHHQHRLLFSFTSKTTPFHSLHSLHFKRKPLLSF*******************STAPVEYAPPPPDFNFHQEISRLKKLRSRLAVSQSLSHKLSVLDSDSRLKNFFNDKHSNYFARVLASLNLDQLFLIKCVIAAGQEHVLNLEPEYVESEARSDIKSALYALVEFIDRLDVNGRNSEAKDAVLEIEQVKDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLAQSKFE**********ESMECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERR****************LHQTPDGSFLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQVRFT
****TPILHQNNHHQHRLLFSFTSKTTPFHSLHSLHFKRKPLL***************QSITRVSTAPVEYAPPPPDFNFHQEISRLKKLRSRLAVSQSLSHKLSVLDSDSRLKNFFNDKHSNYFARVLASLNLDQLFLIKCVIAAGQEHVLNLEPEYVESEARSDIKSALYALVEFIDRLDVNG******DAVLEIEQVKDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLAQSKF***********ESMECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSS**********SL*QTPDGSFLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQVRFT
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSSTTPILHQNNHHQHRLLFSFTSKTTPFHSLHSLHFKRKPLLSFSSSYSASSSSQQHQSITRVSTAPVEYAPPPPDFNFHQEISRLKKLRSRLAVSQSLSHKLSVLDSDSRLKNFFNDKHSNYFARVLASLNLDQLFLIKCVIAAGQEHVLNLEPEYVESEARSDIKSALYALVEFIDRLDVNGRNSEAKDAVLEIEQVKDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLAQSKFERKTTKSQHVHESMECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQVRFT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query811 2.2.26 [Sep-21-2011]
Q0GZS3614 UDP-sugar pyrophospharyla N/A no 0.498 0.657 0.252 1e-09
Q5W915600 UDP-sugar pyrophospharyla N/A no 0.601 0.813 0.245 1e-09
Q9C5I1614 UDP-sugar pyrophosphoryla no no 0.676 0.894 0.225 8e-09
Q09WE7600 UDP-sugar pyrophosphoryla no no 0.454 0.615 0.255 4e-08
A2YGP6616 UDP-sugar pyrophosphoryla N/A no 0.581 0.766 0.230 4e-05
Q5Z8Y4616 UDP-sugar pyrophosphoryla no no 0.584 0.769 0.217 8e-05
Q6GEQ8395 Probable uridylyltransfer yes no 0.177 0.364 0.253 0.0002
Q7A0A0395 Probable uridylyltransfer yes no 0.177 0.364 0.240 0.0008
Q6G7E3395 Probable uridylyltransfer yes no 0.177 0.364 0.240 0.0008
Q7A4A4395 Probable uridylyltransfer yes no 0.177 0.364 0.240 0.0008
>sp|Q0GZS3|USP_CUCME UDP-sugar pyrophospharylase OS=Cucumis melo GN=USP PE=1 SV=1 Back     alignment and function desciption
 Score = 65.9 bits (159), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 185/452 (40%), Gaps = 48/452 (10%)

Query: 296 GGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGK-QCITPVAI 354
           GG  +RLG   +     LPA      G   L+  I  + A      +L G+ +   P  I
Sbjct: 148 GGLGERLGY--NGIKVALPAETT--TGTCFLQSYIEYVLALREASNRLAGESETEIPFVI 203

Query: 355 MTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRP---FAPVC 411
           MTS   + H R   L E   +FG   S  +L +Q  V  +D  + + L + P   +    
Sbjct: 204 MTSD--DTHTRTVELLESNSYFGMKPSQVKLLKQEKVACLDDNEAR-LAVDPHNKYRIQT 260

Query: 412 KPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLAL-AGIGLHHGKKL 470
           KP GHG +  L +  G+ K +H+ G +     Q +N      L   A+ A +G+   ++ 
Sbjct: 261 KPHGHGDVHALLYSSGLLKNWHNAGLRWVLFFQDTN-----GLLFKAIPASLGVSATREY 315

Query: 471 GFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKF----GITRGPFSSNGLQ 526
              S      A E I  +    + DG+    +  +EY + D      G   G  ++    
Sbjct: 316 HVNSLAVPRKAKEAIGGITRLTHTDGRSM--VINVEYNQLDPLLRATGFPDGDVNNETGY 373

Query: 527 ADFPANTNILYVDLAS--AELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLE 584
           + FP N N L ++L S   EL   S+ + ++   V N K       +F  +      RLE
Sbjct: 374 SPFPGNINQLILELGSYIEEL---SKTQGAIKEFV-NPKYKDATKTSFKSST-----RLE 424

Query: 585 CTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGS 644
           C MQ+         S+R    V   +DT++ Y   +     A K  K      H    G 
Sbjct: 425 CMMQDYPKTL--PPSARVGFTV---MDTWVAYAPVKNNPEDAAKVPK--GNPYHSATSGE 477

Query: 645 FLDILRNAYDILCQCHIKLPE-IEG--NDKYIDDGPPYLILLHPALGLLWEVTRQKFKGG 701
            + I R    +L +  +K+ + +E   N + ++  P   I   P  GL +   + K  G 
Sbjct: 478 -MAIYRANSLVLRKAGVKVADPVEQVFNGQEVEVWP--RITWKPKWGLTFSEIKSKINGN 534

Query: 702 -SVSKGSELQIEVAEFLWRNVQLDGSLIIVAE 732
            S+S  S L I+      +++ LDG+LI+ A+
Sbjct: 535 CSISPRSTLVIKGKNVYLKDLSLDGTLIVNAD 566




May function as the terminal enzyme of the myo-inositol oxidation (MIO) pathway. May also play a role in the salvage pathway for synthesis of nucleotide sugars. Can convert galactose-1-phosphate into glucose-1-phosphate by carrying out both the Gal-1-P conversion to UDP-Gal and, following an epimerase step, the subsequent reverse reaction of UDP-Glc to Glc-1-P.
Cucumis melo (taxid: 3656)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 6EC: 4
>sp|Q5W915|USP_PEA UDP-sugar pyrophospharylase OS=Pisum sativum GN=USP PE=1 SV=1 Back     alignment and function description
>sp|Q9C5I1|USP_ARATH UDP-sugar pyrophosphorylase OS=Arabidopsis thaliana GN=USP PE=1 SV=1 Back     alignment and function description
>sp|Q09WE7|USP1_SOYBN UDP-sugar pyrophosphorylase 1 OS=Glycine max GN=USP1 PE=1 SV=1 Back     alignment and function description
>sp|A2YGP6|USP_ORYSI UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. indica GN=USP PE=3 SV=2 Back     alignment and function description
>sp|Q5Z8Y4|USP_ORYSJ UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. japonica GN=USP PE=2 SV=1 Back     alignment and function description
>sp|Q6GEQ8|URTF_STAAR Probable uridylyltransferase SAR2262 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2262 PE=3 SV=1 Back     alignment and function description
>sp|Q7A0A0|URTF_STAAW Probable uridylyltransferase MW2097 OS=Staphylococcus aureus (strain MW2) GN=MW2097 PE=3 SV=1 Back     alignment and function description
>sp|Q6G7E3|URTF_STAAS Probable uridylyltransferase SAS2072 OS=Staphylococcus aureus (strain MSSA476) GN=SAS2072 PE=3 SV=1 Back     alignment and function description
>sp|Q7A4A4|URTF_STAAN Probable uridylyltransferase SA1974 OS=Staphylococcus aureus (strain N315) GN=SA1974 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query811
224109282877 predicted protein [Populus trichocarpa] 0.982 0.908 0.741 0.0
255574832884 conserved hypothetical protein [Ricinus 0.921 0.845 0.736 0.0
225448507860 PREDICTED: uncharacterized protein LOC10 0.967 0.912 0.725 0.0
147794750866 hypothetical protein VITISV_024684 [Viti 0.967 0.906 0.717 0.0
356568154857 PREDICTED: uncharacterized protein LOC10 0.966 0.914 0.705 0.0
357461351868 hypothetical protein MTR_3g071440 [Medic 0.985 0.920 0.677 0.0
297820348883 hypothetical protein ARALYDRAFT_486043 [ 0.986 0.906 0.659 0.0
18410414883 UDP-glucose pyrophosphorylase 3 [Arabido 0.985 0.904 0.664 0.0
449441288865 PREDICTED: LOW QUALITY PROTEIN: uncharac 0.974 0.913 0.666 0.0
356539993766 PREDICTED: uncharacterized protein LOC10 0.860 0.911 0.734 0.0
>gi|224109282|ref|XP_002315147.1| predicted protein [Populus trichocarpa] gi|222864187|gb|EEF01318.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1198 bits (3099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/820 (74%), Positives = 689/820 (84%), Gaps = 23/820 (2%)

Query: 2   SSTTPILHQNNHHQHRLLFSFTSKTTPFHSLHSLHFKRKPLLSFSSSYSASSSSQQHQSI 61
           SST  +L  NN  ++  LFSF S    F+   SL FK+    S      + SSS      
Sbjct: 10  SSTNILLRYNNKKRNDFLFSFNS-INLFNK--SLPFKKP---SLHPPLLSLSSSPSKPLT 63

Query: 62  TRVSTAPVEYAPPPPD-FNFHQEISRLKKLRSRLAVSQSLSHKLSVLDSDSRLKNFFNDK 120
           TRVS APVEYAPP PD FNFHQEISRL+ LRS+LA S++L+ K SVL+ DSR+K FF   
Sbjct: 64  TRVSIAPVEYAPPAPDSFNFHQEISRLQSLRSKLAHSKTLNGKQSVLNDDSRVKRFFK-- 121

Query: 121 HSNYFARVLASLNLD--QLFLIKCVIAAGQEHVLNLEP-EYVESEA----RSDIKSALYA 173
                +R L S+NL   +LFL+KC++AAGQEHV++LE  E VESEA    R+ +KSALY+
Sbjct: 122 -IGGVSRFLDSINLTSRELFLLKCLVAAGQEHVVSLEGFELVESEAVESVRTSVKSALYS 180

Query: 174 LVEFIDRLDVNGRNSEAKDAV-----LEIEQVKDLNKLLKTLAEIEQFYDCVGGIIGYQV 228
           LVE I+  D++   ++  + +     L  E++KDL KLLK+L E+E+FYDC+GG+IGYQ+
Sbjct: 181 LVEIIEGFDLSDNGNKGLERINYGENLTDEEIKDLKKLLKSLGEVEEFYDCIGGVIGYQI 240

Query: 229 EVLELLAQSKFERKTTK-SQHVHESMECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLP 287
            VLELL QS F+++TT  SQH+ ESMECQFLEIH PSGLDLS+NTEYA+QAALWGIEGLP
Sbjct: 241 MVLELLFQSTFKKQTTNWSQHIKESMECQFLEIHAPSGLDLSKNTEYASQAALWGIEGLP 300

Query: 288 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQ 347
           +LGEIYPLGGSADRLGLVD +TGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFK+YGKQ
Sbjct: 301 DLGEIYPLGGSADRLGLVDPDTGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKIYGKQ 360

Query: 348 CITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPF 407
           CITPVAIMTSSAKNNHE ITSLCERL WFGRGQSSFQLFEQPLVPA+ AEDGQWLV +PF
Sbjct: 361 CITPVAIMTSSAKNNHEHITSLCERLSWFGRGQSSFQLFEQPLVPAISAEDGQWLVTKPF 420

Query: 408 APVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHG 467
           APVCKPGGHG IWKLA+DKGIF+WF+D+ RKGATVRQVSNVVAATDLTLLALAGIGL H 
Sbjct: 421 APVCKPGGHGVIWKLAYDKGIFEWFYDHDRKGATVRQVSNVVAATDLTLLALAGIGLRHR 480

Query: 468 KKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQA 527
           KKLGFASCKR+SGATEGINVLIEKKNLDG+WAYGLSCIEYTEFDKF IT GP S+NGLQA
Sbjct: 481 KKLGFASCKRNSGATEGINVLIEKKNLDGQWAYGLSCIEYTEFDKFEITGGPCSTNGLQA 540

Query: 528 DFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTM 587
           +FPANTNILYVDL S ELV SS NE+SLPGMVLNTKKPIVYMD++G+ HSV GGRLECTM
Sbjct: 541 EFPANTNILYVDLPSLELVASSNNEKSLPGMVLNTKKPIVYMDHYGNCHSVYGGRLECTM 600

Query: 588 QNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLD 647
           QNIADNF NTY SRCYKGVED LDTF+VYNERRRVTSSAK+KR+ +D +LHQTPDG+ LD
Sbjct: 601 QNIADNFTNTYLSRCYKGVEDKLDTFIVYNERRRVTSSAKRKRRHSDNTLHQTPDGALLD 660

Query: 648 ILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGS 707
           ILRNAYD+L  C I+LP+IEGNDKY++ GPP+LI LHPALG LWEVTRQKF GGS+SKGS
Sbjct: 661 ILRNAYDLLSHCDIELPQIEGNDKYVESGPPFLIYLHPALGPLWEVTRQKFNGGSISKGS 720

Query: 708 ELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNK 767
           ELQIEVAEF WRNVQLDGSLII+AENVMGSTRI  NGE ILQYG RCGRC+L NVKV+NK
Sbjct: 721 ELQIEVAEFSWRNVQLDGSLIIIAENVMGSTRIDPNGEPILQYGNRCGRCRLQNVKVVNK 780

Query: 768 GIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASDVTLQ 807
           GI+W  GDN YWKHDVQ FEALKVILHGNAEFEA +VT+Q
Sbjct: 781 GINWSFGDNIYWKHDVQRFEALKVILHGNAEFEADNVTIQ 820




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574832|ref|XP_002528323.1| conserved hypothetical protein [Ricinus communis] gi|223532278|gb|EEF34081.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|225448507|ref|XP_002273020.1| PREDICTED: uncharacterized protein LOC100241552 [Vitis vinifera] gi|297736576|emb|CBI25447.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147794750|emb|CAN60362.1| hypothetical protein VITISV_024684 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356568154|ref|XP_003552278.1| PREDICTED: uncharacterized protein LOC100788781 [Glycine max] Back     alignment and taxonomy information
>gi|357461351|ref|XP_003600957.1| hypothetical protein MTR_3g071440 [Medicago truncatula] gi|355490005|gb|AES71208.1| hypothetical protein MTR_3g071440 [Medicago truncatula] Back     alignment and taxonomy information
>gi|297820348|ref|XP_002878057.1| hypothetical protein ARALYDRAFT_486043 [Arabidopsis lyrata subsp. lyrata] gi|297323895|gb|EFH54316.1| hypothetical protein ARALYDRAFT_486043 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18410414|ref|NP_567031.1| UDP-glucose pyrophosphorylase 3 [Arabidopsis thaliana] gi|332645948|gb|AEE79469.1| UDP-glucose pyrophosphorylase 3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449441288|ref|XP_004138414.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101221986 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356539993|ref|XP_003538476.1| PREDICTED: uncharacterized protein LOC100804343 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query811
TAIR|locus:2082038883 UGP3 "UDP-glucose pyrophosphor 0.969 0.890 0.648 8.3e-280
TAIR|locus:2149574614 USP "UDP-sugar pyrophosphoryla 0.604 0.798 0.232 2.7e-09
TAIR|locus:2082038 UGP3 "UDP-glucose pyrophosphorylase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2689 (951.6 bits), Expect = 8.3e-280, P = 8.3e-280
 Identities = 524/808 (64%), Positives = 618/808 (76%)

Query:    19 LFSFTSKTTP--FHSLH---SLHFKRKPLLXXXXXXXXXXXXXXXXXITRVSTAPVEYAP 73
             LF F + T+P  F SLH    L F                       +  VST PVEY+ 
Sbjct:    19 LFHFRTTTSPRSFSSLHFRKPLLFLSSSS-SFSSKLQQSEQQCNNHQVRHVSTVPVEYST 77

Query:    74 P-PPDFN-FHQEISRLKKLRSRLAVSQSLSHKLSVLDSDSRLKNFFNDKHSNYFARVLA- 130
             P PP+ + F  EI RLK L S+L VS+ L  K +V+D+DSR++ FF++      ++V   
Sbjct:    78 PTPPESDDFLSEIDRLKSLLSKLDVSKDLRRKDAVIDADSRVRRFFSENRGG-LSKVFGY 136

Query:   131 -SLNLDQLFLIKCVIAAGQEHVL--NLEPEYVESE----ARSDIKSALYALVEFIDRLDV 183
               LN +++FL+KCVIAAGQEH L  N E  + E E     RS +K+ALYALVE I+R DV
Sbjct:   137 LGLNSNEMFLVKCVIAAGQEHALCMNYEEAFGEEEEEYTVRSSVKNALYALVEMIERFDV 196

Query:   184 NGRNSEAK---DAVLEIEQVKDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLAQSKFE 240
             N    + +     VL+ E++    K L  L EIEQFYDC+GGIIGYQV VLELL QS   
Sbjct:   197 NSSGYKGRREMGTVLDSEEIAHFRKFLTFLEEIEQFYDCIGGIIGYQVMVLELLHQSSKR 256

Query:   241 RKTTKSQHVHESMECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSAD 300
             R T +SQ V ES+ CQ+LE+H PS LDL+Q  +YA+QAALWGIEGLP+LGEIYPLGG+AD
Sbjct:   257 RNTNRSQLVEESLGCQYLEMHTPSVLDLTQEEDYASQAALWGIEGLPDLGEIYPLGGAAD 316

Query:   301 RLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAK 360
             RLGL+D ETGECLPAAML +CGRTLLEGLIRDLQAREFLYFKLYGKQC+TPVAIMTS+AK
Sbjct:   317 RLGLIDSETGECLPAAMLAHCGRTLLEGLIRDLQAREFLYFKLYGKQCVTPVAIMTSAAK 376

Query:   361 NNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIW 420
             NNHE ++SLCERL+WFGRGQS+F+LFEQPLVPAV AEDGQW+V +PF PV KPGGHG IW
Sbjct:   377 NNHEHVSSLCERLKWFGRGQSNFRLFEQPLVPAVSAEDGQWIVSKPFVPVSKPGGHGVIW 436

Query:   421 KLAHDKGIFKWFHDNGRKGATVRQVSNVVXXXXXXXXXXXGIGLHHGKKLGFASCKRSSG 480
             KLA+DKG+F WF+D+GRKGATVRQVSNVV           GIGL + KKLGFASCKR++G
Sbjct:   437 KLAYDKGVFNWFYDHGRKGATVRQVSNVVAATDVTLLALAGIGLRYNKKLGFASCKRNAG 496

Query:   481 ATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGIT-RGPFSSNGLQADFPANTNILYVD 539
             ATEGINVL+EKKN DGKW YG+SCIEYTEFDKF I+ R P SSNGLQADFPANTNILYVD
Sbjct:   497 ATEGINVLMEKKNFDGKWEYGISCIEYTEFDKFDISNRSP-SSNGLQADFPANTNILYVD 555

Query:   540 LASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYS 599
             L SAEL+GSS N +SLP MVLNTKK I Y+D +GD HSV GGRLECTMQNIADNF N + 
Sbjct:   556 LHSAELIGSSSNAKSLPNMVLNTKKRIEYLDQYGDYHSVMGGRLECTMQNIADNFFNKFP 615

Query:   600 SRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQC 659
             SRC+  +ED LDT++VYNERR+VTSSAKKK+  A  +LHQTPDG+ LDILRN YD+L +C
Sbjct:   616 SRCHGSLEDKLDTYIVYNERRKVTSSAKKKKPHASAALHQTPDGALLDILRNGYDLLTEC 675

Query:   660 HIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWR 719
              IKLP IE NDKY+D  PPYLILLHPALG LWEV+RQKFKGGS+S  SELQ+E+AEF W 
Sbjct:   676 DIKLPMIEANDKYVDSPPPYLILLHPALGPLWEVSRQKFKGGSISSCSELQLEIAEFSWN 735

Query:   720 NVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNTYW 779
             NVQ+DGSLI+ AEN MGST   DNGE ILQYG RCG+CKL+NV V+N+GIDW+   N YW
Sbjct:   736 NVQVDGSLIVTAENAMGSTTPNDNGEPILQYGLRCGKCKLHNVNVVNRGIDWNSKSNVYW 795

Query:   780 KHDVQWFEALKVILHGNAEFEASDVTLQ 807
             ++DV   E  K+ILHGNAEFEAS+VT++
Sbjct:   796 RNDVNRLETCKIILHGNAEFEASNVTIE 823


GO:0008152 "metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016779 "nucleotidyltransferase activity" evidence=IEA
GO:0016036 "cellular response to phosphate starvation" evidence=RCA
GO:0019375 "galactolipid biosynthetic process" evidence=RCA
TAIR|locus:2149574 USP "UDP-sugar pyrophosphorylase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
gw1.X.1665.1
hypothetical protein (811 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_fgenesh4_pg.C_LG_VI1540
UDP-sulfoquinovose synthase (EC-3.13.1.1) (483 aa)
      0.422
estExt_Genewise1_v1.C_LG_IX1928
hypothetical protein (432 aa)
      0.420

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query811
PLN02830615 PLN02830, PLN02830, UDP-sugar pyrophosphorylase 6e-13
cd04193323 cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphoryl 5e-12
cd06424315 cd06424, UGGPase, UGGPase catalyzes the synthesis 1e-10
COG4284472 COG4284, COG4284, UDP-glucose pyrophosphorylase [C 1e-07
PTZ00339482 PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyroph 6e-05
>gnl|CDD|215444 PLN02830, PLN02830, UDP-sugar pyrophosphorylase Back     alignment and domain information
 Score = 72.0 bits (177), Expect = 6e-13
 Identities = 156/695 (22%), Positives = 246/695 (35%), Gaps = 147/695 (21%)

Query: 105 SVLDSDSRLKNFFNDKHSNYFARVLASLNLDQLFLIKCVIAAGQEHVLNLEPEYVESEAR 164
           S L   S+  +     HSN     LA L+ DQ  L++ ++  GQ H+    PE       
Sbjct: 1   SALSVASKSDSSVPSLHSN-----LALLSPDQRALVRRLLELGQSHLFEHWPE------- 48

Query: 165 SDIKSALYALVEFIDRLDVNGRNSEAKDAVLEIEQVKDLNKLLKTLAEIEQFYDCVGGII 224
                               G + + K  +LE  QV  L+          + Y   GG+ 
Sbjct: 49  -------------------PGVDDDDKRRLLE--QVARLD----------ESYP--GGLA 75

Query: 225 GYQVEVLELLAQSKFERKTTKSQHVHESMECQFLEIHVPSGLDLSQNT-EYAAQAALWGI 283
            Y     ELLA SK        + V+           VP G  L   + E+         
Sbjct: 76  AYVSNAKELLADSK--------EGVNPFEGW---TPSVPEGEVLEYGSEEFVELEE---- 120

Query: 284 EGLPELGE---IYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQA-REFL 339
            GL E G    +   GG  +RLG    +    LP       G   L+  I  + A +E  
Sbjct: 121 AGLREAGNAAFVLVAGGLGERLGYSGIKVA--LPTETA--TGTCYLQLYIESILALQERA 176

Query: 340 YFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDG 399
             +   K    P+ IMTS   + H R   L ER  +FG       L +Q  V  +   D 
Sbjct: 177 KKRKAKKGRKIPLVIMTSD--DTHARTLKLLERNDYFGMDPDQVTLLKQEKVACLMDNDA 234

Query: 400 QWLVMRP---FAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTL 456
           + L + P   +    KP GHG +  L +  G+   +   G+K     Q +N        +
Sbjct: 235 R-LALDPNDPYKIQTKPHGHGDVHALLYSSGLLDKWLSAGKKWVVFFQDTN--GLVFKAI 291

Query: 457 LALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGIT 516
            A  G+    G  +   +  R   A E I  + +  + DG+    +  +EY + D     
Sbjct: 292 PAALGVSATKGFDMNSLAVPRK--AKEAIGAIAKLTHKDGREM--VINVEYNQLDPL--- 344

Query: 517 RGPFSSNG-LQAD---------FPANTNILYVDLAS--AELVGSSENERSLPGMVLNTKK 564
                + G    D         FP N N L + L     EL   ++    +   V N K 
Sbjct: 345 ---LRATGHPDGDVNDETGYSPFPGNINQLILKLGPYVKEL---AKTGGVIEEFV-NPK- 396

Query: 565 PIVYMDNFGDTHSV--PGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRV 622
              Y D    T +      RLEC MQ+         S++    V    D ++ Y+  +  
Sbjct: 397 ---YKD---ATKTAFKSPTRLECMMQDYPKTL--PPSAKVGFTV---FDNWLAYSPVKNS 445

Query: 623 TSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQ--CHIKLPEIE--GNDKYIDDGPP 678
            +    K      +   +     + I      IL +    ++ P  +   N   ++ GP 
Sbjct: 446 PADGAAKVPEG--NPTHSATSGEMAIYGANCLILRKAGADVEEPVEDVVFNGIEVEVGPR 503

Query: 679 YLILLHPALGLLWEVTRQKFKGG--SVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMG 736
             I+L PA  L +   ++K   G   +S+ S L +E A+ +  N+ LDG+L++       
Sbjct: 504 --IVLKPAFALTFSELKKKVAPGSVKISQRSTLVLEGADIVIENLSLDGALVVR------ 555

Query: 737 STRIADNGESILQYGYRCGRCKLNNVKVLNKGIDW 771
               A  G  +           +  ++V NKG  W
Sbjct: 556 ----AVPGAEV----------TVGGLRVKNKGWTW 576


Length = 615

>gnl|CDD|133036 cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc Back     alignment and domain information
>gnl|CDD|133046 cd06424, UGGPase, UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose Back     alignment and domain information
>gnl|CDD|226734 COG4284, COG4284, UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|240368 PTZ00339, PTZ00339, UDP-N-acetylglucosamine pyrophosphorylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 811
PLN02830615 UDP-sugar pyrophosphorylase 100.0
PLN02435493 probable UDP-N-acetylglucosamine pyrophosphorylase 100.0
PTZ00339482 UDP-N-acetylglucosamine pyrophosphorylase; Provisi 100.0
cd06424315 UGGPase UGGPase catalyzes the synthesis of UDP-Glu 100.0
PLN02474469 UTP--glucose-1-phosphate uridylyltransferase 100.0
KOG2388477 consensus UDP-N-acetylglucosamine pyrophosphorylas 100.0
PF01704420 UDPGP: UTP--glucose-1-phosphate uridylyltransferas 100.0
cd04193323 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catala 100.0
cd00897300 UGPase_euk Eukaryotic UGPase catalyses the synthes 100.0
KOG2638498 consensus UDP-glucose pyrophosphorylase [Carbohydr 100.0
COG4284472 UDP-glucose pyrophosphorylase [Carbohydrate transp 100.0
cd04180266 UGPase_euk_like Eukaryotic UGPase-like includes UD 100.0
COG1207460 GlmU N-acetylglucosamine-1-phosphate uridyltransfe 97.82
PRK05293380 glgC glucose-1-phosphate adenylyltransferase; Prov 97.6
PRK00844407 glgC glucose-1-phosphate adenylyltransferase; Prov 97.46
cd06915223 NTP_transferase_WcbM_like WcbM_like is a subfamily 97.45
PRK14352482 glmU bifunctional N-acetylglucosamine-1-phosphate 97.42
cd02540229 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU 97.36
cd04197217 eIF-2B_epsilon_N The N-terminal domain of epsilon 97.36
PRK14356456 glmU bifunctional N-acetylglucosamine-1-phosphate 97.35
cd04189236 G1P_TT_long G1P_TT_long represents the long form o 97.33
cd04181217 NTP_transferase NTP_transferases catalyze the tran 97.33
PRK02862429 glgC glucose-1-phosphate adenylyltransferase; Prov 97.31
PRK05450245 3-deoxy-manno-octulosonate cytidylyltransferase; P 97.31
PRK14360450 glmU bifunctional N-acetylglucosamine-1-phosphate 97.29
TIGR02092369 glgD glucose-1-phosphate adenylyltransferase, GlgD 97.28
PRK14359430 glmU bifunctional N-acetylglucosamine-1-phosphate 97.25
cd02509274 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransf 97.23
PRK15480292 glucose-1-phosphate thymidylyltransferase RfbA; Pr 97.19
TIGR01207286 rmlA glucose-1-phosphate thymidylyltransferase, sh 97.18
PRK14353446 glmU bifunctional N-acetylglucosamine-1-phosphate 97.16
PLN02241436 glucose-1-phosphate adenylyltransferase 97.12
PRK14358481 glmU bifunctional N-acetylglucosamine-1-phosphate 97.11
TIGR01173451 glmU UDP-N-acetylglucosamine diphosphorylase/gluco 97.04
cd06426220 NTP_transferase_like_2 NTP_trnasferase_like_2 is a 97.03
PRK14355459 glmU bifunctional N-acetylglucosamine-1-phosphate 97.03
cd02508200 ADP_Glucose_PP ADP-glucose pyrophosphorylase is in 97.01
PRK00725425 glgC glucose-1-phosphate adenylyltransferase; Prov 96.98
PF00483248 NTP_transferase: Nucleotidyl transferase This Pros 96.97
cd02538240 G1P_TT_short G1P_TT_short is the short form of glu 96.92
cd06422221 NTP_transferase_like_1 NTP_transferase_like_1 is a 96.91
cd06425233 M1P_guanylylT_B_like_N N-terminal domain of the M1 96.79
TIGR01208353 rmlA_long glucose-1-phosphate thymidylylransferase 96.77
cd02524253 G1P_cytidylyltransferase G1P_cytidylyltransferase 96.73
cd02517239 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes th 96.73
cd06428257 M1P_guanylylT_A_like_N N-terminal domain of M1P_gu 96.7
PRK14357448 glmU bifunctional N-acetylglucosamine-1-phosphate 96.63
TIGR02091361 glgC glucose-1-phosphate adenylyltransferase. This 96.62
TIGR00454183 conserved hypothetical protein TIGR00454. At this 96.62
PRK13385230 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans 96.56
TIGR02623254 G1P_cyt_trans glucose-1-phosphate cytidylyltransfe 96.4
PRK13368238 3-deoxy-manno-octulosonate cytidylyltransferase; P 96.35
PRK09451456 glmU bifunctional N-acetylglucosamine-1-phosphate 96.28
COG2266177 GTP:adenosylcobinamide-phosphate guanylyltransfera 96.27
TIGR01479468 GMP_PMI mannose-1-phosphate guanylyltransferase/ma 96.26
PF01128221 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidyly 96.26
PLN02728252 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans 96.24
cd04198214 eIF-2B_gamma_N The N-terminal domain of gamma subu 96.17
COG0746192 MobA Molybdopterin-guanine dinucleotide biosynthes 96.11
cd04182186 GT_2_like_f GT_2_like_f is a subfamily of the glyc 96.09
PRK00560196 molybdopterin-guanine dinucleotide biosynthesis pr 96.0
PRK14354458 glmU bifunctional N-acetylglucosamine-1-phosphate 95.99
TIGR01105297 galF UTP-glucose-1-phosphate uridylyltransferase, 95.93
cd02523229 PC_cytidylyltransferase Phosphocholine cytidylyltr 95.9
COG1213239 Predicted sugar nucleotidyltransferases [Cell enve 95.79
cd02513223 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N- 95.76
TIGR03310188 matur_ygfJ molybdenum hydroxylase accessory protei 95.63
PRK10122297 GalU regulator GalF; Provisional 95.63
TIGR02665186 molyb_mobA molybdopterin-guanine dinucleotide bios 95.44
PF12804160 NTP_transf_3: MobA-like NTP transferase domain; PD 95.44
PLN02917293 CMP-KDO synthetase 95.43
cd02503181 MobA MobA catalyzes the formation of molybdopterin 95.34
TIGR00453217 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl 95.21
cd02516218 CDP-ME_synthetase CDP-ME synthetase is involved in 95.14
PRK14490369 putative bifunctional molybdopterin-guanine dinucl 95.08
PRK00155227 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyl 95.07
TIGR03202190 pucB xanthine dehydrogenase accessory protein pucB 95.05
PRK02726200 molybdopterin-guanine dinucleotide biosynthesis pr 95.04
PRK00317193 mobA molybdopterin-guanine dinucleotide biosynthes 95.02
TIGR01099260 galU UTP-glucose-1-phosphate uridylyltransferase. 94.82
COG1209286 RfbA dTDP-glucose pyrophosphorylase [Cell envelope 94.65
PRK14489366 putative bifunctional molybdopterin-guanine dinucl 94.49
COG1208358 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas 93.94
PRK14500346 putative bifunctional molybdopterin-guanine dinucl 93.91
cd02541267 UGPase_prokaryotic Prokaryotic UGPase catalyses th 93.88
COG1211230 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synt 93.67
PRK09382378 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosp 93.56
COG0448393 GlgC ADP-glucose pyrophosphorylase [Carbohydrate t 93.26
cd04183231 GT2_BcE_like GT2_BcbE_like is likely involved in t 93.03
TIGR00466238 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransfe 92.52
cd02507216 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma 92.51
PRK13389302 UTP--glucose-1-phosphate uridylyltransferase subun 90.81
PRK15460478 cpsB mannose-1-phosphate guanyltransferase; Provis 90.34
cd02518233 GT2_SpsF SpsF is a glycosyltrnasferase implicated 88.76
COG0836333 {ManC} Mannose-1-phosphate guanylyltransferase [Ce 85.44
KOG1322371 consensus GDP-mannose pyrophosphorylase/mannose-1- 84.04
>PLN02830 UDP-sugar pyrophosphorylase Back     alignment and domain information
Probab=100.00  E-value=3.4e-122  Score=1059.32  Aligned_cols=574  Identities=24%  Similarity=0.328  Sum_probs=512.7

Q ss_pred             chhHHhhccCCccHHHHHHHHHHcCCccccccCccchhhhhhhhhHHHHHHHHHhhhhccccCCCcccccccc--chhhH
Q 003559          123 NYFARVLASLNLDQLFLIKCVIAAGQEHVLNLEPEYVESEARSDIKSALYALVEFIDRLDVNGRNSEAKDAVL--EIEQV  200 (811)
Q Consensus       123 ~~~~~~~~~l~~~~~~l~~~L~~~gQeHll~~~~~w~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L--~~~~~  200 (811)
                      ++|+++++.|++++++|+++|.++||+|||++|++                                     |  +++  
T Consensus        14 ~~~~~~~~~~~~~~~~l~~~L~~~gQ~HL~~~w~~-------------------------------------l~~~~~--   54 (615)
T PLN02830         14 PSLHSNLALLSPDQRALVRRLLELGQSHLFEHWPE-------------------------------------PGVDDD--   54 (615)
T ss_pred             cccccccccCChhHHHHHHHHHHcCcHHHHhhhhc-------------------------------------cCCCHH--
Confidence            68999999999999999999999999999999554                                     4  454  


Q ss_pred             HHHHHHHHHHHHHhccccCcchhHHHHHHHHHHHHccccccccccccccccccccccccc-c-CCCCcccCCChHHHHHH
Q 003559          201 KDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLAQSKFERKTTKSQHVHESMECQFLEI-H-VPSGLDLSQNTEYAAQA  278 (811)
Q Consensus       201 ~~~~~Ll~qL~~ld~~y~~~ggl~~y~~~a~~ll~~s~~~~~~~~~~~~~~~~~~~~~~~-~-vP~g~~l~~~~~~~~~~  278 (811)
                       +|++|++||..+|..||  ||+.+|+.++.+++.++..  +.           .+++++ | +|.+..++++++....|
T Consensus        55 -e~~~L~~qL~~ld~~y~--g~l~~~~~~~~~~l~~s~~--~~-----------~~~~~i~P~vp~~~~~~~~~~~~~~~  118 (615)
T PLN02830         55 -DKRRLLEQVARLDESYP--GGLAAYVSNAKELLADSKE--GV-----------NPFEGWTPSVPEGEVLEYGSEEFVEL  118 (615)
T ss_pred             -HHHHHHHHHHhcccccc--chHHHHHHHHHHHHhhccc--CC-----------CchhhcccCCCccccccccchhhhHH
Confidence             89999999999999995  9999999999999986521  11           133443 4 68888777766666778


Q ss_pred             HHHhhhccCcEEEEEecCCccccCCCCCCCCCceeeccccCCCCCcchHHHHHHHHHHHHHhHhhcC-CcccceEEEecC
Q 003559          279 ALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYG-KQCITPVAIMTS  357 (811)
Q Consensus       279 e~~Gle~l~kvavVlLAGGlGTRLG~~~pKgg~~lpV~l~p~sgkTlLql~~e~I~~lq~La~~~~g-~~~~IPl~IMTS  357 (811)
                      +++|+++|+|+|||+||||||||||+++||+  +|||+++  +|+||||++++||+++|+||.++.+ ..+.||||||||
T Consensus       119 ~~~Gl~~l~kvavllLaGGlGTRLG~~~pK~--~lpv~~~--~gkt~lql~~e~I~~lq~la~~~~~~~~~~IPl~IMTS  194 (615)
T PLN02830        119 EEAGLREAGNAAFVLVAGGLGERLGYSGIKV--ALPTETA--TGTCYLQLYIESILALQERAKKRKAKKGRKIPLVIMTS  194 (615)
T ss_pred             HHHHHHHhCcEEEEEecCCcccccCCCCCCc--ceecccC--CCCcHHHHHHHHHHHHHHHHHHhcccCCCCceEEEECC
Confidence            8999999999999999999999999999999  9999976  9999999999999999999977554 558999999999


Q ss_pred             CCCCchHHHHHHHHHhCCCCCCCCceEEEecCCeeeEecCCCcccccC--CCCccccCCCCcHHHHHHHhcCchHHHHHc
Q 003559          358 SAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMR--PFAPVCKPGGHGAIWKLAHDKGIFKWFHDN  435 (811)
Q Consensus       358 ~~~~Th~~T~~fle~n~yFGl~~~qV~~F~Q~~vP~l~~~dgki~l~~--~~~l~~~P~GhGdIy~aL~~sGlLd~l~~~  435 (811)
                      +  +||++|++||++|+|||++++||+||+|+++||+++++|++++++  +++++|+||||||||+||+++|+||+|+++
T Consensus       195 ~--~T~~~T~~~~~~n~~FGl~~~~v~~F~Q~~~P~~~~~~g~~~l~~~d~~~i~~~P~GhGdi~~aL~~sGlLd~l~~~  272 (615)
T PLN02830        195 D--DTHARTLKLLERNDYFGMDPDQVTLLKQEKVACLMDNDARLALDPNDPYKIQTKPHGHGDVHALLYSSGLLDKWLSA  272 (615)
T ss_pred             c--chhHHHHHHHHHCCccCCCccceEEEEcCcceeEecCCCcccccCCCCCccccCCCCccHHHHHHHHCCCHHHHHHc
Confidence            9  899999999999999999999999999999999998889999987  889999999999999999999999999999


Q ss_pred             CceEEEEEeCCCCcccc-cHhHHHHhhhhhhcCCceeEEEeeecCCCCcCceEEEEEecCCCccccceEEEEecccCccc
Q 003559          436 GRKGATVRQVSNVVAAT-DLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFG  514 (811)
Q Consensus       436 Gikyi~v~~vDN~La~v-DP~~l~flG~~~~~~~~~~~~~vvRK~~~~e~vGvL~~~r~~dGk~~~~~~vVEYsEl~~~~  514 (811)
                      |+||+|||||||+|+++ ||.|   +|+|+.++++|++++|.|  .+.|++|++|+.++.||++  +++||||+|++++.
T Consensus       273 G~~yi~v~~vDN~L~~~Adp~f---lG~~~~~~~d~~~kvv~K--~~~E~vGvi~~~~~~dG~~--l~~vVEYse~~~ll  345 (615)
T PLN02830        273 GKKWVVFFQDTNGLVFKAIPAA---LGVSATKGFDMNSLAVPR--KAKEAIGAIAKLTHKDGRE--MVINVEYNQLDPLL  345 (615)
T ss_pred             CCEEEEEEeccchhhhcccHHH---hHHHHhcCCceEEEEEEC--CCCcccceEEEEecCCCCe--eeEEEeecccCHHH
Confidence            99999999999999998 9855   899999999999998655  4689999999866788874  46899999999883


Q ss_pred             ----CCCCCCCCCCcccccccceeeeeEeHHHHHhhhcccccCCccccccccCCCcceecCCCCccccCccccccchhhh
Q 003559          515 ----ITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNI  590 (811)
Q Consensus       515 ----~~~~~~~dg~l~s~f~~Ninn~~fsL~~L~~vl~~~~~~~Lp~hvan~KKkIpy~D~~g~~~~~~p~rLE~~Mqd~  590 (811)
                          .++++..+++++|.|||||||+|++|+.|++++++ +.+.||++| |||    |+|.++ +.++.++||||||||+
T Consensus       346 ~~a~~p~g~l~~~~~~s~FPgNtN~L~v~L~a~~~~l~~-~~~~lp~iv-NpK----~~d~~~-~v~q~~trle~~mq~f  418 (615)
T PLN02830        346 RATGHPDGDVNDETGYSPFPGNINQLILKLGPYVKELAK-TGGVIEEFV-NPK----YKDATK-TAFKSPTRLECMMQDY  418 (615)
T ss_pred             HhccCCCcccccccccccCCCCceeeEeeHHHHHHHHHh-CCCccceec-cCc----ccCCCC-ceeecchHHHHHHHHH
Confidence                34566677888999999999999999999999986 789999865 987    888764 5788999999999999


Q ss_pred             hhhhccccccccccceeeecccceeeeeccCCCchhhhhccccCCCCCCChhhhHHHHHHHHHHHHHHCCcccCccc---
Q 003559          591 ADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPEIE---  667 (811)
Q Consensus       591 ~~~F~~~y~~~~~k~~f~~~~R~~~FsPvKn~~~sa~k~~~~~~~~~~~sp~ta~~dl~~~~~~~L~~aG~~vp~~~---  667 (811)
                      ++.|.     ...++||+++++|.+|+||||++.++++|...+ ++ .+||+++++|+|++++++|..+|+.+.++.   
T Consensus       419 ~~~~~-----~~~~vg~~v~~~~~~f~PVKn~~s~a~~k~~~~-~~-~~~~~s~e~d~y~~~~llL~~s~~~~~~~~~~~  491 (615)
T PLN02830        419 PKTLP-----PSAKVGFTVFDNWLAYSPVKNSPADGAAKVPEG-NP-THSATSGEMAIYGANCLILRKAGADVEEPVEDV  491 (615)
T ss_pred             hhhcC-----cccccCceecCchheeccccCChHHhhhhcccC-CC-ccCcchhhHHHHHHHHHHHHhcCCccccCcccc
Confidence            99985     356799999999999999999989998888765 44 559999999999999999999888776443   


Q ss_pred             -CCCcccccCCCeeEEeCCCccccHHHHhhcc-CC-CCCCCCcEEEEEeceEEeeceEEEEEEEEEeccCCCCccccCCC
Q 003559          668 -GNDKYIDDGPPYLILLHPALGLLWEVTRQKF-KG-GSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNG  744 (811)
Q Consensus       668 -~~~~~~~~~P~~~I~L~P~~~~~~~~~~~k~-~~-gsi~~~S~L~VeG~~~f~~~v~ldGslvI~a~~~~g~~~~~~~g  744 (811)
                       .++.++..+|+  |.|+|+|+++|+++++|| ++ ++|+++|+|+|+|+++||+||+|||+|+|.|+.  |+       
T Consensus       492 ~~~~~~~~~~P~--I~L~p~f~~~~~~~~~k~~~~~~si~~~s~L~v~G~~~~~~~v~LdG~viI~a~~--~~-------  560 (615)
T PLN02830        492 VFNGIEVEVGPR--IVLKPAFALTFSELKKKVAPGSVKISQRSTLVLEGADIVIENLSLDGALVVRAVP--GA-------  560 (615)
T ss_pred             ccCCcccCCCCe--EEECchhhhHHHHHHHHhcCCCCcccCCCeEEEEeeeEEecCeEEEEEEEEEcCC--CC-------
Confidence             56888888996  999999999999999999 76 699999999999999999999999999999883  33       


Q ss_pred             cceeecccccceEEEeeeEEeeCceeeecCCC--------ceecceeeEEEEEEEEeecCceeE
Q 003559          745 ESILQYGYRCGRCKLNNVKVLNKGIDWDCGDN--------TYWKHDVQWFEALKVILHGNAEFE  800 (811)
Q Consensus       745 ~~i~~~~~~~g~~~l~~~~V~N~G~~~~~~~~--------~~~~~~v~r~e~~~i~~~~~~ef~  800 (811)
                                 +|+|+|++|+|+||+|++++.        .||||+++|+|++++++..+|+|.
T Consensus       561 -----------~~~i~g~~v~N~g~~~~~~~~~~~~~~~~~irg~~~~~~e~~~~~~~~~g~~~  613 (615)
T PLN02830        561 -----------EVTVGGLRVKNKGWTWEPVDKGTSAPEEIRIRGFVIKKVETAELVFDKPGKYT  613 (615)
T ss_pred             -----------eEEecCeEEecCCcEEEecCCCCCcchhhhhcceeEeeeeeEEEEecCCCcee
Confidence                       688999999999999999633        499999999999999999999985



>PLN02435 probable UDP-N-acetylglucosamine pyrophosphorylase Back     alignment and domain information
>PTZ00339 UDP-N-acetylglucosamine pyrophosphorylase; Provisional Back     alignment and domain information
>cd06424 UGGPase UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose Back     alignment and domain information
>PLN02474 UTP--glucose-1-phosphate uridylyltransferase Back     alignment and domain information
>KOG2388 consensus UDP-N-acetylglucosamine pyrophosphorylase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PF01704 UDPGP: UTP--glucose-1-phosphate uridylyltransferase; InterPro: IPR002618 This family consists of UTP--glucose-1-phosphate uridylyltransferases (2 Back     alignment and domain information
>cd04193 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc Back     alignment and domain information
>cd00897 UGPase_euk Eukaryotic UGPase catalyses the synthesis of UDP-Glucose Back     alignment and domain information
>KOG2638 consensus UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG4284 UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04180 UGPase_euk_like Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes Back     alignment and domain information
>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases Back     alignment and domain information
>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU Back     alignment and domain information
>cd04197 eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2 Back     alignment and domain information
>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase Back     alignment and domain information
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars Back     alignment and domain information
>PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional Back     alignment and domain information
>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit Back     alignment and domain information
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose Back     alignment and domain information
>PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional Back     alignment and domain information
>TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form Back     alignment and domain information
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PLN02241 glucose-1-phosphate adenylyltransferase Back     alignment and domain information
>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase Back     alignment and domain information
>cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family Back     alignment and domain information
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch Back     alignment and domain information
>PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry Back     alignment and domain information
>cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase Back     alignment and domain information
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family Back     alignment and domain information
>cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins Back     alignment and domain information
>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form Back     alignment and domain information
>cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose Back     alignment and domain information
>cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide Back     alignment and domain information
>cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase Back     alignment and domain information
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>TIGR02091 glgC glucose-1-phosphate adenylyltransferase Back     alignment and domain information
>TIGR00454 conserved hypothetical protein TIGR00454 Back     alignment and domain information
>PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional Back     alignment and domain information
>TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase Back     alignment and domain information
>PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional Back     alignment and domain information
>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism] Back     alignment and domain information
>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Back     alignment and domain information
>PF01128 IspD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro: IPR001228 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, a bacterial ispD protein, catalyzes the third step of the deoxyxylulose-5-phosphate pathway (DXP) of isoprenoid biosynthesis; the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate [] Back     alignment and domain information
>PLN02728 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Back     alignment and domain information
>cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2 Back     alignment and domain information
>COG0746 MobA Molybdopterin-guanine dinucleotide biosynthesis protein A [Coenzyme metabolism] Back     alignment and domain information
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function Back     alignment and domain information
>PRK00560 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional Back     alignment and domain information
>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit Back     alignment and domain information
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline Back     alignment and domain information
>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02513 CMP-NeuAc_Synthase CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety Back     alignment and domain information
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family Back     alignment and domain information
>PRK10122 GalU regulator GalF; Provisional Back     alignment and domain information
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial Back     alignment and domain information
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B Back     alignment and domain information
>PLN02917 CMP-KDO synthetase Back     alignment and domain information
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide Back     alignment and domain information
>TIGR00453 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Back     alignment and domain information
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production Back     alignment and domain information
>PRK14490 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MobA; Provisional Back     alignment and domain information
>PRK00155 ispD 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Reviewed Back     alignment and domain information
>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB Back     alignment and domain information
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional Back     alignment and domain information
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed Back     alignment and domain information
>TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase Back     alignment and domain information
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14489 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB; Provisional Back     alignment and domain information
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK14500 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MoaC/MobA; Provisional Back     alignment and domain information
>cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose Back     alignment and domain information
>COG1211 IspD 4-diphosphocytidyl-2-methyl-D-erithritol synthase [Lipid metabolism] Back     alignment and domain information
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional Back     alignment and domain information
>COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule Back     alignment and domain information
>TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase Back     alignment and domain information
>cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity Back     alignment and domain information
>PRK13389 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; Provisional Back     alignment and domain information
>PRK15460 cpsB mannose-1-phosphate guanyltransferase; Provisional Back     alignment and domain information
>cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat Back     alignment and domain information
>COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG1322 consensus GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query811
3oc9_A405 Crystal Structure Of Putative Udp-N-Acetylglucosami 4e-07
1jvd_A522 Crystal Structure Of Human Agx2 Complexed With Udpg 9e-04
1jv1_A505 Crystal Structure Of Human Agx1 Complexed With Udpg 9e-04
>pdb|3OC9|A Chain A, Crystal Structure Of Putative Udp-N-Acetylglucosamine Pyrophosphorylase From Entamoeba Histolytica Length = 405 Back     alignment and structure

Iteration: 1

Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 8/159 (5%) Query: 292 IYPLGGSADRLGLVDHETGE-CLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCIT 350 I P GG RLG +H G LP + + E L+R LQ Y + K + Sbjct: 39 ITPAGGQGSRLGF-EHPKGMFVLPFEIPKSIFQMTSERLLR-LQELASEY--SHQKNVMI 94 Query: 351 PVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPV 410 +MT+ + E I + + ++FG F Q ++P VD +G+ L + P Sbjct: 95 HWFLMTN--EETIEEINNYFKEHQYFGLSSEQIHCFPQGMLPVVDF-NGKILYEKKDKPY 151 Query: 411 CKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVV 449 P GHG ++K D GI ++ ++ G K + V N++ Sbjct: 152 MAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDNIL 190
>pdb|1JVD|A Chain A, Crystal Structure Of Human Agx2 Complexed With Udpglcnac Length = 522 Back     alignment and structure
>pdb|1JV1|A Chain A, Crystal Structure Of Human Agx1 Complexed With Udpglcnac Length = 505 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query811
3ogz_A630 UDP-sugar pyrophosphorylase; LEFT handed beta heli 3e-59
1jv1_A505 Glcnac1P uridyltransferase isoform 1: AGX1; nucleo 1e-44
2yqc_A486 UDP-N-acetylglucosamine pyrophosphorylase; uridine 1e-41
2oeg_A505 UTP-glucose-1-phosphate uridylyltransferase 2, put 9e-33
3oc9_A405 UDP-N-acetylglucosamine pyrophosphorylase; structu 1e-32
3gue_A484 UTP-glucose-1-phosphate uridylyltransferase 2; pho 3e-31
3r3i_A528 UTP--glucose-1-phosphate uridylyltransferase; ross 3e-25
2i5k_A488 UTP--glucose-1-phosphate uridylyltransferase; LEFT 7e-25
2icy_A469 Probable UTP-glucose-1-phosphate uridylyltransfera 3e-24
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* Length = 630 Back     alignment and structure
 Score =  211 bits (538), Expect = 3e-59
 Identities = 102/630 (16%), Positives = 171/630 (27%), Gaps = 100/630 (15%)

Query: 195 LEIEQVKDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLAQSKFERKTTKSQHVHESME 254
              E  +    LL  L      Y   GG+  Y     ELLA+   E      +       
Sbjct: 33  TVDECNERQIALLTDLYMFSNMY--PGGVAQYIRNGHELLARESEEVDFAALEMPPL--- 87

Query: 255 CQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLP 314
                  +     L + T         G   L +   +   GG  +RLG    +    + 
Sbjct: 88  -------IFEAPSLHRRTAERTALENAGTAMLCKTVFVLVAGGLGERLGYSSIKVSLPVE 140

Query: 315 AAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLR 374
            A       T L   +R  Q       ++ GK+   P  IMTS   + H+R   L   LR
Sbjct: 141 TAT----NTTYLAYYLRWAQ-------RVGGKE--VPFVIMTSD--DTHDRTLQL---LR 182

Query: 375 WFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKG------- 427
                  +  + +Q  V           +      + KP GHG +  L ++         
Sbjct: 183 ELQLEVPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVP 242

Query: 428 -----------IFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCK 476
                      +   +   G +     Q +N  A   +       +   H   + F    
Sbjct: 243 DSGDGTATAQPLVNDWLAAGYESIVFIQDTNAGATITIP--ISLALSAEHSLDMNFTCIP 300

Query: 477 RSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRG-----PFSSNGLQADFPA 531
           R     E I +L   K   G   + ++ +EY  F +             S     + FP 
Sbjct: 301 RV--PKEPIGLLCRTKKNSGD-PWLVANVEYNVFAEVSRALNKDGGDEVSDPTGFSPFPG 357

Query: 532 NTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIA 591
           + N L   L+S        +       ++       Y D           R+E  MQ+IA
Sbjct: 358 SVNTLVFKLSSY------VDRLRESHGIVPEFINPKYSDE-TRRSFKKPARIESLMQDIA 410

Query: 592 DNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRN 651
             F    S   Y+      + F     +    S  +     A  +               
Sbjct: 411 LLF----SEDDYRVGGTVFERFSYQPVK---NSLEEAAGLVAQGNGAYCAATGEAAFYEL 463

Query: 652 AYDILCQCHIKL-----PEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFK-----GG 701
               L    + L     PE+             +I+L         +             
Sbjct: 464 QRRRLKAIGLPLFYSSQPEVTVAKDAFGVRLFPIIVLDTVCASSGSLDDLARVFPTPEKV 523

Query: 702 SVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNN 761
            + + S L +E    +  +++L G+L I                             + N
Sbjct: 524 HIDQHSTLIVE-GRVIIESLELYGALTIRGPT-----------------DSMALPHVVRN 565

Query: 762 VKVLNKGIDWDCGDNTYWKHDVQWFEALKV 791
             V N G       +     D +  E  ++
Sbjct: 566 AVVRNAGWSVHAILSLCAGRDSRLSEVDRI 595


>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Length = 505 Back     alignment and structure
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* Length = 486 Back     alignment and structure
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* Length = 505 Back     alignment and structure
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} Length = 405 Back     alignment and structure
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} Length = 484 Back     alignment and structure
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A Length = 528 Back     alignment and structure
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Length = 488 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 811
d1jv1a_501 c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphor 7e-39
d2icya2378 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 4e-19
>d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Length = 501 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: UDP-glucose pyrophosphorylase
domain: UDP-N-acetylglucosamine pyrophosphorylase
species: Human (Homo sapiens), AGX1 [TaxId: 9606]
 Score =  149 bits (377), Expect = 7e-39
 Identities = 89/475 (18%), Positives = 162/475 (34%), Gaps = 90/475 (18%)

Query: 132 LNLDQLFLIKCVIAAGQEHVLNLEPEYVESEARSDIKSALYALVEFIDRLDVNGRNSEAK 191
           +N++ L     +  AGQEH+L    E  E++     +  LYA ++ ++            
Sbjct: 1   MNINDL--KLTLSKAGQEHLLRFWNELEEAQ-----QVELYAELQAMN------------ 41

Query: 192 DAVLEIEQVKDLNKLLKTLAEIEQFYDCVGGIIGYQVEVLELLAQSKFERKTTKSQHVHE 251
                               E+  F+             +E   QS         ++V  
Sbjct: 42  ------------------FEELNFFFQKA----------IEGFNQSS------HQKNVDA 67

Query: 252 SMECQFLEIHVPSGLDLSQNTEYAAQAALWGIEGLPE--LGEIYPLGGSADRLGLVDHET 309
            ME    E+   +  D  Q   + ++    G+  + +  +  +   GG   RLG+     
Sbjct: 68  RMEPVPREVLGSATRDQDQLQAWESE----GLFQISQNKVAVLLLAGGQGTRLGVAY--- 120

Query: 310 GECLPAAMLP---YCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERI 366
               P  M        +TL +     +   + +  K YG +CI P  IMTS      E  
Sbjct: 121 ----PKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTS--GRTMEST 174

Query: 367 TSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDK 426
                + ++FG  + +   F+Q ++PA+   DG+ ++         P G+G +++    +
Sbjct: 175 KEFFTKHKYFGLKKENVIFFQQGMLPAMS-FDGKIILEEKNKVSMAPDGNGGLYRALAAQ 233

Query: 427 GIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGIN 486
            I +     G     V  V N++           G  +  G   G    ++++  TE + 
Sbjct: 234 NIVEDMEQRGIWSIHVYCVDNILVKV--ADPRFIGFCIQKGADCGAKVVEKTN-PTEPVG 290

Query: 487 VLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPANTNILYVDLASAELV 546
           V+      DG        +EY+E      T    SS+G       N    +  +     V
Sbjct: 291 VVCRV---DGV----YQVVEYSEISLA--TAQKRSSDGRLLFNAGNIANHFFTVPFLRDV 341

Query: 547 GSSENERSLPGMVLNTKKPIVYMDNFGDTH---SVPGGRLECTMQNIADNFLNTY 598
             +  E  L   V   +K I Y+D  G         G ++E  + +I        
Sbjct: 342 -VNVYEPQLQHHV--AQKKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAKKFV 393


>d2icya2 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 378 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query811
d1jv1a_501 UDP-N-acetylglucosamine pyrophosphorylase {Human ( 100.0
d2icya2378 UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c 100.0
d2icya183 UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c 99.03
d1yp2a2307 Glucose-1-phosphate adenylyltransferase small subu 98.33
d2cu2a2268 Putative mannose-1-phosphate guanylyl transferase 98.1
d1lvwa_295 RmlA (RfbA) {Archaeon Methanobacterium thermoautot 98.08
d1fxoa_292 RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} 98.0
d1mc3a_291 RffH {Escherichia coli [TaxId: 562]} 97.8
d1w77a1226 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 97.79
d1g97a2250 N-acetylglucosamine 1-phosphate uridyltransferase 97.67
d1i52a_225 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 97.46
d2oi6a2248 N-acetylglucosamine 1-phosphate uridyltransferase 97.4
d1tzfa_259 Glucose-1-phosphate cytidylyltransferase RfbF {Sal 97.33
d1w55a1205 IspD/IspF bifunctional enzyme, CDP-me synthase dom 97.3
d1vgwa_226 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 97.27
d1vpaa_221 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) 97.2
d1jyka_229 CTP:phosphocholine cytidylytransferase LicC {Strep 97.02
d1e5ka_188 Molybdenum cofactor biosynthesis protein MobA {Esc 96.86
d2dpwa1231 Uncharacterized protein TTHA0179 {Thermus thermoph 95.47
>d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: UDP-glucose pyrophosphorylase
domain: UDP-N-acetylglucosamine pyrophosphorylase
species: Human (Homo sapiens), AGX1 [TaxId: 9606]
Probab=100.00  E-value=0  Score=745.19  Aligned_cols=432  Identities=20%  Similarity=0.243  Sum_probs=376.6

Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             05899999999848732135476300122334469998887876530144678863200001444099999999999987
Q 003559          134 LDQLFLIKCVIAAGQEHVLNLEPEYVESEARSDIKSALYALVEFIDRLDVNGRNSEAKDAVLEIEQVKDLNKLLKTLAEI  213 (811)
Q Consensus       134 ~~~~~l~~~L~~~gQ~Hll~~~~~w~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~k~~Ll~qL~~l  213 (811)
                      |+.++|++.|.++||+|||++|++                                     |+++   +|++|++||..+
T Consensus         1 m~~~~l~~~L~~~gQ~HLl~~~~~-------------------------------------l~~~---ek~~L~~qL~~i   40 (501)
T d1jv1a_           1 MNINDLKLTLSKAGQEHLLRFWNE-------------------------------------LEEA---QQVELYAELQAM   40 (501)
T ss_dssp             CCHHHHHHHHHHTTCGGGGTTGGG-------------------------------------SCHH---HHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHCCHHHHHHHHH-------------------------------------CCHH---HHHHHHHHHHHC
T ss_conf             988999999998393988855642-------------------------------------8999---999999999855


Q ss_pred             HCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCC--CCCCCHHHHHHHHHHHHHCCC--C
Q ss_conf             31135866067799999999970311123565534222122445333-599976--568781899999997651049--4
Q 003559          214 EQFYDCVGGIIGYQVEVLELLAQSKFERKTTKSQHVHESMECQFLEI-HVPSGL--DLSQNTEYAAQAALWGIEGLP--E  288 (811)
Q Consensus       214 d~~y~~~gGl~~Y~~~a~~ll~~s~~~~~~~~~~~~~~~~~~~~~~~-~vP~g~--~l~~~~~~~~~~e~~Gle~l~--k  288 (811)
                      |.     +++..|+.++.+++..+.. ...            +++.+ ++|...  ......+...+|++.|+++|+  |
T Consensus        41 d~-----~~l~~~~~~a~~~~~~~~~-~~~------------~~~~~~p~p~~~~~~~~~~~~~~~~~~~~G~~~i~~gk  102 (501)
T d1jv1a_          41 NF-----EELNFFFQKAIEGFNQSSH-QKN------------VDARMEPVPREVLGSATRDQDQLQAWESEGLFQISQNK  102 (501)
T ss_dssp             CH-----HHHHHHHHHHHHCC------------------------CCBCCCGGGEEETTTTGGGHHHHHHHHHHHHHTTC
T ss_pred             CH-----HHHHHHHHHHHHHHHHCCC-CCC------------CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             99-----9999999999987653255-567------------53335679846504656686778999986189885498


Q ss_pred             EEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHH
Q ss_conf             88999158965668999999881342654689998524999999999998867631992211299965999984699999
Q 003559          289 LGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITS  368 (811)
Q Consensus       289 vavIlLAGGlGTRLG~~~pKgg~~lpv~l~~~sgkTlLql~ie~I~~lq~la~k~~G~~~~IPl~IMTS~~~~Th~~T~~  368 (811)
                      +|+|+||||||||||+++|||  ++||+++  +++||||+++++|+++|+++.++++..+.|||+||||+  +||++|++
T Consensus       103 vavvllaGG~GTRLG~~~pK~--~~~v~~~--~~ksllql~~e~i~~l~~~a~~~~~~~~~iPl~IMtS~--~T~~~t~~  176 (501)
T d1jv1a_         103 VAVLLLAGGQGTRLGVAYPKG--MYDVGLP--SRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSG--RTMESTKE  176 (501)
T ss_dssp             EEEEEECCCCCCTTSCSSCGG--GCCCCCT--TCCCHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECT--TTHHHHHH
T ss_pred             EEEEEECCCCCCCCCCCCCCE--EEEECCC--CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCH--HHHHHHHH
T ss_conf             899997898566678888963--0142567--88749999999999999999985378998549998884--37699999


Q ss_pred             HHHHHCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCEEEEEEECCCC
Q ss_conf             99980799889985399854971047269980302279975214799817879998349037999769439999927987
Q 003559          369 LCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNV  448 (811)
Q Consensus       369 ~le~n~yFGl~~~qV~~F~Q~~vP~l~~~dgkl~l~~~~~i~~~P~GHGdIy~aL~~sGiLd~l~~~Gikyi~v~qvDN~  448 (811)
                      ||++|+|||+++++|++|+|+++||++ .+|+++++++++++|+|+||||||.+|+++|+|++|.++|++|++|+||||+
T Consensus       177 ~l~~~~~FGl~~~~v~~f~Q~~~P~~~-~~g~i~~~~~~~i~~~P~GhG~i~~aL~~sG~ld~l~~~Gi~yi~v~~vDN~  255 (501)
T d1jv1a_         177 FFTKHKYFGLKKENVIFFQQGMLPAMS-FDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNI  255 (501)
T ss_dssp             HHHHTGGGGSCGGGEEEEECCEEECEE-TTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETTBT
T ss_pred             HHHHCCCCCCCCCCEEEEEECCCCEEC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCEEEEEEECCCC
T ss_conf             999664348986756999835760587-8987135888861156799558999999788399999779979999956875


Q ss_pred             CCCC-CHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             4334-475899865344139952578962037987672389987427995016628998035586567789899998555
Q 003559          449 VAAT-DLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQA  527 (811)
Q Consensus       449 La~v-DP~il~~lG~~~~~~~~~~~~~v~RK~~~~e~vGvL~~~~~~dGk~~~~~~vVEYsEl~~~~~~~~~~~dg~l~s  527 (811)
                      |+++ ||.|   +|+++..++++++++ ++|+.++|+||++|+   .||+    +++|||+|++++. .+...++|.+. 
T Consensus       256 l~~~~Dp~~---lG~~~~~~~~~~~kv-v~k~~~~e~~G~l~~---~dg~----~~vvEysel~~~~-~~~~~~~g~l~-  322 (501)
T d1jv1a_         256 LVKVADPRF---IGFCIQKGADCGAKV-VEKTNPTEPVGVVCR---VDGV----YQVVEYSEISLAT-AQKRSSDGRLL-  322 (501)
T ss_dssp             TCCTTCHHH---HHHHHHTTCSEEEEE-EECCSTTCSCCEEEE---ETTE----EEEECGGGSCHHH-HHCBCTTSSBS-
T ss_pred             CCCCCCHHH---HHHHHHCCCCEEEEE-EECCCCCCCCCEEEE---ECCE----EEEEEECCCCHHH-HHHCCCCCCCC-
T ss_conf             324448889---999984446204799-876789863136998---8996----7998713588778-75016777312-


Q ss_pred             CCCC-CEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCC---CCCCCCCCCCHHHHHHHHCCCCCCCCC
Q ss_conf             5655-133556738889965023566885540002489851006999953---458520010002456310022445655
Q 003559          528 DFPA-NTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTH---SVPGGRLECTMQNIADNFLNTYSSRCY  603 (811)
Q Consensus       528 ~f~~-Ninnl~~~L~~l~~vl~~~~~~~Lp~hianpKKkIpy~D~~g~~~---~~~p~rLE~~Mqdi~~~F~~~y~~~~~  603 (811)
                       |++ |||||||+++||+++++. ....||+|++.  |||||+|.+|...   .++++|||+||||++..|.        
T Consensus       323 -f~~~Ni~~~~fsl~fl~~~~~~-~~~~l~~hva~--Kki~~~d~~~~~~~p~~~n~iklE~fifD~~~~~~--------  390 (501)
T d1jv1a_         323 -FNAGNIANHFFTVPFLRDVVNV-YEPQLQHHVAQ--KKIPYVDTQGQLIKPDKPNGIKMEKFVFDIFQFAK--------  390 (501)
T ss_dssp             -SCEEEEEEEEEEHHHHHHHHHT-TGGGCCCEEEE--ECCCEECTTSCEECCSSCCEEEEECCGGGGGGGCS--------
T ss_pred             -CCCCCEEHEEEEHHHHHHHHHH-CCCCCCCEEEC--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--------
T ss_conf             -5535500213579999999871-34477736855--65476177787636899862337999999998516--------


Q ss_pred             CCEEEECCCCEEEEECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             42034326411331025888536653012377899993546999999999999877951476
Q 003559          604 KGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPE  665 (811)
Q Consensus       604 ~~~f~~~~r~~~FsPvKn~~~sa~k~~~~~~~~~~~sp~ta~~dl~~~~~~~L~~aG~~vp~  665 (811)
                      ++++.+++|+.+|+||||+++..          ..|||+||+.+++..+++||.++|+.+.+
T Consensus       391 ~~~~~~V~R~~eFaPvKN~~~~~----------~~dsp~ta~~~l~~~~~~wl~~aG~~~~~  442 (501)
T d1jv1a_         391 KFVVYEVLREDEFSPLKNADSQN----------GKDNPTTARHALMSLHHCWVLNAGGHFID  442 (501)
T ss_dssp             SEEEEEECHHHHCCBCCSCTTSS----------SSSSHHHHHHHHHHHHHHHHHHTTCEEBC
T ss_pred             CEEEEEECHHHCCCCCCCCCCCC----------CCCCHHHHHHHHHHHHHHHHHHCCCEEEC
T ss_conf             45999976243313245798777----------88898999999998768999986983733



>d2icya1 b.81.1.4 (A:384-466) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lvwa_ c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1mc3a_ c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w77a1 c.68.1.13 (A:75-300) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Back     information, alignment and structure
>d1g97a2 c.68.1.5 (A:2-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1i52a_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2oi6a2 c.68.1.5 (A:4-251) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tzfa_ c.68.1.13 (A:) Glucose-1-phosphate cytidylyltransferase RfbF {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d1vgwa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Neisseria gonorrhoeae [TaxId: 485]} Back     information, alignment and structure
>d1vpaa_ c.68.1.13 (A:) 4-diphosphocytidyl-2C-methyl-D-erythritol (CDP-me) synthase (IspD, YgbP) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jyka_ c.68.1.13 (A:) CTP:phosphocholine cytidylytransferase LicC {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1e5ka_ c.68.1.8 (A:) Molybdenum cofactor biosynthesis protein MobA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2dpwa1 c.68.1.19 (A:1-231) Uncharacterized protein TTHA0179 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure