Citrus Sinensis ID: 003603

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------81
MEEEDKIEESSVRLLTSVGSGGGGESRWVDGSEVDSESPPWSLSEENGAREGFGSMRRRLVKKPKYDSLDVEAMEIAGAFGDHSKDVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSKVQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLISRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGEILALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPLMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV
ccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccHHHcccccccccccccHHHHHHHHHHHHHcEEEccccccHHHHHHHHcccccccccccEEHHHHHHHHHHHHHHHHHHEEEEEEccccccccHHHHHHHHHccccccccccccccHHHHHcccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHEEccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHccHHHHHHHHHHccccHHHHHHcHHHHHccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccEEEcHHHHHHHHHHHHHEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccccccccEEEEEEEcccccccHHHHHHHHHcccccEEEEEEEEEEEccccccccccEEEEEEccccccEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEccEEEEcccccHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEc
cccHcccccccHHHccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccHcHHccccccccccccccHHHHHHHHHHHccEEEcccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccHHHHHHHHHHHHcccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHEccccccHHHHHHHHHccHHcccccHHHHHHHHHHHHHHHHHHHHEcccHHHHHHccHHHHHHHHHHcccccEEEccHEEEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHEEEEHcccccHHHHHHHccccccEEcccEEEEEHHHHccccHHHHHHHHccccHEEEEEEEEEEEcccccccHHHEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccEEEEEEccEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHEEEcEEEEc
MEEEDKIEESSVRLLTsvgsggggesrwvdgsevdsesppwslseengaregFGSMRRrlvkkpkydsldVEAMEIAGafgdhskdvSVWHTLALAFQTLGVvygdmgtsplyvySDVFSKVQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKandngeggtFALYSLISRYAKvnmlpnrqpadeqissfrlklptpELERALQLKDILERTSSLKTLLLLLVLMGTSliigdgiltPAISVMSAVsglqgeihGFGEILALWFFSLgsiglynlvKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYlmkypdsanrifydsvpdslfWPVFVLAALAAMIASQAMISATFSCIKQAMalgcfprlkiIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKiaeggwlpLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLgstlgtvrvpgIGLLYNELVQGIPSIFGqfllslpaiHSTIVFVCIkyvpvpmvrleerflfrrvgpkdyhmfrcvtrygykdvrkeDHHVFEQLLVASLEKFLRKEAQDLALERNLLesdldsvsvasrdpeasgsygteelkiplmherrfdesgtsaseettsalpssvmaldedpslEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCragaanmsvphmnilqvgmtymv
meeedkieESSVRLltsvgsggggesrwvdgsevdsesppwslseengaregfgsmrrrlvkkpkydSLDVEAMEIAGAFGDHSKDVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSKVQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLISRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGEILALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLfrrvgpkdyhmfrCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLlesdldsvsvasrdpeasgsygteelkiplMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV
MEEEDKIEESSVRLLTSVGSGGGGESRWVDGSEVDSESPPWSLSEENGAREGFGSMRRRLVKKPKYDSLDVEAMEIAGAFGDHSKDVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSKVQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLISRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDIlertsslktlllllvlmgtslIIGDGILTPAISVMSAVSGLQGEIHGFGEILALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVlaalaamiasqamisaTFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPLMHERRFDesgtsaseettsalpssVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV
*******************************************************************SLDVEAMEIAGAFGDHSKDVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSKVQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLISRYAKVNML*********************LERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGEILALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLAL*********************************************************************YELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMT***
*******************************************************************************************TLALAFQTLGVVYGDMGTSPLYVYSDVFSKVQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLISRYAKVNMLPNRQPADEQISSFRLK***********LKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGEILALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKE*****************************************************************************LSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV
***********************************************GAREGFGSMRRRLVKKPKYDSLDVEAMEIAGAFGDHSKDVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSKVQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLISRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGEILALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDS*************YGTEELKIPLMHERR*****************SSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV
***************************************************************PKYDSLDVEAMEIAGAFGDHSKDVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSKVQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLISRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGEILALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQD********************************************************************PSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV
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MEEEDKIEESSVRLLTSVGSGGGGESRWVDGSEVDSESPPWSLSEENGAREGFGSMRRRLVKKPKYDSLDVEAMEIAGAFGDHSKDVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSKVQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLISRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGEILALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPLMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query808 2.2.26 [Sep-21-2011]
O80739827 Putative potassium transp yes no 0.978 0.956 0.728 0.0
Q6H4R6877 Potassium transporter 23 yes no 0.977 0.900 0.687 0.0
Q9FY75858 Potassium transporter 7 O no no 0.990 0.932 0.527 0.0
Q8LPL8855 Potassium transporter 13 no no 0.965 0.912 0.533 0.0
Q69RI8859 Probable potassium transp no no 0.972 0.915 0.519 0.0
Q7XPL3867 Probable potassium transp no no 0.924 0.861 0.492 0.0
Q8H3P9811 Potassium transporter 7 O no no 0.866 0.863 0.452 0.0
Q9M7K4785 Potassium transporter 5 O no no 0.930 0.957 0.438 0.0
Q942X8783 Probable potassium transp no no 0.879 0.908 0.446 0.0
Q5JK32781 Potassium transporter 5 O no no 0.919 0.951 0.426 0.0
>sp|O80739|POT12_ARATH Putative potassium transporter 12 OS=Arabidopsis thaliana GN=POT12 PE=1 SV=2 Back     alignment and function desciption
 Score = 1199 bits (3103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/839 (72%), Positives = 696/839 (82%), Gaps = 48/839 (5%)

Query: 5   DKIEE-SSVRLLTSVGSGGGGESRWVDGSEVDSESPPWSLSEENGAREGFGSMRRRLVKK 63
           ++IEE SS   +  VG+G   + RWVDGSEVDSE+P +S  E       FG++RRRL+KK
Sbjct: 2   EEIEEGSSNNSIRRVGTGSS-DRRWVDGSEVDSETPLFS--EIRDRDYSFGNLRRRLMKK 58

Query: 64  PKY-DSLDVEAMEIAGAFGDHSKDVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSKV 122
           PK  DSLDVEAMEIAG+ G + KD+S+  TL +AFQTLGVVYGDMGTSPLYV+SDVFSKV
Sbjct: 59  PKRADSLDVEAMEIAGSHGHNLKDLSLLTTLGIAFQTLGVVYGDMGTSPLYVFSDVFSKV 118

Query: 123 QIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLISRYAKVNMLPN 182
            I +E+DVLGALSLV+YTI +IPLAKYVFVVLKANDNGEGGTFALYSLI RYAKVN LPN
Sbjct: 119 PIRSEVDVLGALSLVIYTIAVIPLAKYVFVVLKANDNGEGGTFALYSLICRYAKVNKLPN 178

Query: 183 RQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPA 242
           +QPADEQISSFRLKLPTPELERAL +K+ LE    LKTLLLLLVLMGTS+IIGDGILTPA
Sbjct: 179 QQPADEQISSFRLKLPTPELERALGIKEALETKGYLKTLLLLLVLMGTSMIIGDGILTPA 238

Query: 243 ISVMSAVSGLQGEIHGFGE-------------------------------ILALWFFSLG 271
           +SVMSA+SGLQGE+ GFG                                +LALWFFSLG
Sbjct: 239 MSVMSAMSGLQGEVKGFGTNALVMSSIVILVALFSIQRFGTGKVGFLFAPVLALWFFSLG 298

Query: 272 SIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSV 331
           +IG+YNL+KYD +V+RA NP YI LFF KN K AWSALGGCVLCITGAEAMFADLGHFSV
Sbjct: 299 AIGIYNLLKYDFTVIRALNPFYIVLFFNKNSKQAWSALGGCVLCITGAEAMFADLGHFSV 358

Query: 332 KAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIA 391
           ++IQ+AFT VVFPCLLLAYMGQAAYL K+P+++ RIFYDSVP SLFWPVFV+A LAAMIA
Sbjct: 359 RSIQMAFTCVVFPCLLLAYMGQAAYLTKHPEASARIFYDSVPKSLFWPVFVIATLAAMIA 418

Query: 392 SQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQST 451
           SQAMISATFSC+KQAMALGCFPRLKIIHTS+KR+GQIYIPVINWFLMIMC++VVSIF+ST
Sbjct: 419 SQAMISATFSCVKQAMALGCFPRLKIIHTSKKRIGQIYIPVINWFLMIMCILVVSIFRST 478

Query: 452 TDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIA 511
           T IANAYGIAEVGVM+VS+ LVT+VMLLIWQTN+ L LCFPL+FGSVE +Y+ AVL+KI 
Sbjct: 479 THIANAYGIAEVGVMMVSTVLVTLVMLLIWQTNIFLALCFPLIFGSVETIYLLAVLTKIL 538

Query: 512 EGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLY 571
           EGGW+PL FA+ FL VMYIWNYGSVLKY+SEVRE+ISMDF+ +LGSTLGT+R+PGIGLLY
Sbjct: 539 EGGWVPLVFATFFLTVMYIWNYGSVLKYQSEVRERISMDFMRELGSTLGTIRIPGIGLLY 598

Query: 572 NELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCV 631
           NELVQGIPSIFGQFLL+LPAIHSTI+FVCIKYVPVP+V  EERFLFRRV PKDYHMFRC+
Sbjct: 599 NELVQGIPSIFGQFLLTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCI 658

Query: 632 TRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASG 691
            RYGYKDVRKED  VFEQLL+ SLEKFLR EA + ALE  L + D D VSV      AS 
Sbjct: 659 ARYGYKDVRKEDSRVFEQLLIESLEKFLRCEALEDALESTLNDFDPDRVSV------ASD 712

Query: 692 SYGTEELKIPLMHERRFDESGTSASEETTSALPSSVM--ALDEDPSLEYELSALREAIDS 749
           +Y T++L  PL+H  +  E      E  +  LPSS +  +++EDP+LEYEL+ALREA DS
Sbjct: 713 TY-TDDLMAPLIHRAKRSE---PEQELDSEVLPSSSVGSSMEEDPALEYELAALREATDS 768

Query: 750 GFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 808
           G TYLLAHGDVRAKK S F+KKLVINYFYAFLRRNCRAGAAN++VPHMNILQ GMTYMV
Sbjct: 769 GLTYLLAHGDVRAKKNSIFVKKLVINYFYAFLRRNCRAGAANLTVPHMNILQAGMTYMV 827
Putative potassium transporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q6H4R6|HAK23_ORYSJ Potassium transporter 23 OS=Oryza sativa subsp. japonica GN=HAK23 PE=2 SV=1 Back     alignment and function description
>sp|Q9FY75|POT7_ARATH Potassium transporter 7 OS=Arabidopsis thaliana GN=POT7 PE=1 SV=2 Back     alignment and function description
>sp|Q8LPL8|POT13_ARATH Potassium transporter 13 OS=Arabidopsis thaliana GN=POT13 PE=1 SV=1 Back     alignment and function description
>sp|Q69RI8|HAK14_ORYSJ Probable potassium transporter 14 OS=Oryza sativa subsp. japonica GN=HAK14 PE=2 SV=1 Back     alignment and function description
>sp|Q7XPL3|HAK15_ORYSJ Probable potassium transporter 15 OS=Oryza sativa subsp. japonica GN=HAK15 PE=2 SV=2 Back     alignment and function description
>sp|Q8H3P9|HAK7_ORYSJ Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3 Back     alignment and function description
>sp|Q9M7K4|POT5_ARATH Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1 Back     alignment and function description
>sp|Q942X8|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1 Back     alignment and function description
>sp|Q5JK32|HAK5_ORYSJ Potassium transporter 5 OS=Oryza sativa subsp. japonica GN=HAK5 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query808
224111290847 predicted protein [Populus trichocarpa] 0.996 0.950 0.790 0.0
255587597 957 Potassium transporter, putative [Ricinus 0.990 0.835 0.786 0.0
359473336829 PREDICTED: putative potassium transporte 0.981 0.956 0.775 0.0
449481295838 PREDICTED: LOW QUALITY PROTEIN: putative 0.991 0.955 0.755 0.0
147771544889 hypothetical protein VITISV_038659 [Viti 0.967 0.879 0.744 0.0
18138061837 putative potassium transporter [Vicia fa 0.990 0.955 0.742 0.0
356526821841 PREDICTED: putative potassium transporte 0.995 0.956 0.735 0.0
297837505827 potassium transporter family protein [Ar 0.978 0.956 0.729 0.0
42562825827 putative potassium transporter 12 [Arabi 0.978 0.956 0.728 0.0
115478905877 Os09g0376900 [Oryza sativa Japonica Grou 0.977 0.900 0.687 0.0
>gi|224111290|ref|XP_002315805.1| predicted protein [Populus trichocarpa] gi|222864845|gb|EEF01976.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1348 bits (3488), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 668/845 (79%), Positives = 739/845 (87%), Gaps = 40/845 (4%)

Query: 3   EEDKIEESSVRLLTSVGSGGGG-------ESRWVDGSEVDSESPPWSLSEENGAREGFGS 55
           ++D+IEESSVRL+ S   G          ESRWVDGSEVDSESPPWSL +EN + +G+GS
Sbjct: 4   DDDRIEESSVRLVGSSNDGIVDGGGGGVGESRWVDGSEVDSESPPWSLLDENDSSQGYGS 63

Query: 56  MRRRLVKKPK-YDSLDVEAMEIAGAFGDHSKDVSVWHTLALAFQTLGVVYGDMGTSPLYV 114
           MRRRLVKKPK  DS DVEAMEIAGA   HSKD+SVW  LALAFQTLGVVYGD+GTSPLYV
Sbjct: 64  MRRRLVKKPKSVDSFDVEAMEIAGAHHHHSKDLSVWQNLALAFQTLGVVYGDLGTSPLYV 123

Query: 115 YSDVFSKVQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLISRY 174
           ++DVFSKV I +E+DVLGALSLV+YTI LIPLAKYVFVVLKANDNGEGGTFALYSLI RY
Sbjct: 124 FTDVFSKVPIRSEVDVLGALSLVIYTIALIPLAKYVFVVLKANDNGEGGTFALYSLICRY 183

Query: 175 AKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLII 234
           AKVNMLPNRQPADE ISS+RLKLPTPELERAL +K+ LE+ SSLKT+LLLLVL GTS++I
Sbjct: 184 AKVNMLPNRQPADENISSYRLKLPTPELERALNIKETLEKRSSLKTVLLLLVLTGTSMVI 243

Query: 235 GDGILTPAISVMSAVSGLQGEIHGFGE-------------------------------IL 263
           GDGILTPA+SVMSAVSGLQGEI  FG                                +L
Sbjct: 244 GDGILTPAMSVMSAVSGLQGEISDFGTSAVVVVSIIILLGIFSIQRFGTGKVGFMFAPVL 303

Query: 264 ALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMF 323
           ALWFFSLG+IG+YNLVK+DI V++A NP YIY FFKKN   AWSALGGCVLCITGAEAMF
Sbjct: 304 ALWFFSLGAIGIYNLVKHDIRVLKALNPAYIYFFFKKNSSAAWSALGGCVLCITGAEAMF 363

Query: 324 ADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVL 383
           ADLGHFSV++IQIAFT VVFPCLLLAYMGQA+YLMKYPDSA+RIFYDSVP+SLFWPVFV+
Sbjct: 364 ADLGHFSVQSIQIAFTCVVFPCLLLAYMGQASYLMKYPDSASRIFYDSVPESLFWPVFVI 423

Query: 384 AALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVV 443
           A LAAMIASQAMISATFSC+KQAMALGCFPRLKI+HTSRK MGQIYIP+IN+FLMIMC++
Sbjct: 424 ATLAAMIASQAMISATFSCVKQAMALGCFPRLKIVHTSRKLMGQIYIPIINYFLMIMCII 483

Query: 444 VVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYM 503
           VVSIF+ TTDIANAYGIAEVGVM+VS+TLVT+VMLLIW+TNL L LCFPLVFGS+EL+Y+
Sbjct: 484 VVSIFRRTTDIANAYGIAEVGVMIVSTTLVTLVMLLIWRTNLFLALCFPLVFGSIELIYL 543

Query: 504 SAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVR 563
           SAVLSKI EGGWLPLAFA+ FLCVMY WNYGSVLKY+SEVREKISMDF+L+LGSTLGTVR
Sbjct: 544 SAVLSKILEGGWLPLAFATFFLCVMYTWNYGSVLKYQSEVREKISMDFMLELGSTLGTVR 603

Query: 564 VPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPK 623
           VPGIGLLYNELVQG+PSIFGQFLLSLPAIHSTIVFVCIKYVPVP+V  EERFLFRRV PK
Sbjct: 604 VPGIGLLYNELVQGVPSIFGQFLLSLPAIHSTIVFVCIKYVPVPVVPQEERFLFRRVCPK 663

Query: 624 DYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVA 683
           DYHMFRCV RYGYKDVRKE HHVFEQLLV SLEKFLR+EAQDLA+E NL E   D+VS  
Sbjct: 664 DYHMFRCVARYGYKDVRKEGHHVFEQLLVESLEKFLRREAQDLAIESNLNEY-FDNVSER 722

Query: 684 SRDPEASGSYGTEELKIPLMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSAL 743
           SRD  A+G  GT+EL++PLMH+RR +++G+S SEET+SA PSSVM+LDEDPSLEYELSAL
Sbjct: 723 SRDSGAAGGDGTDELRVPLMHDRRLEDAGSSISEETSSAFPSSVMSLDEDPSLEYELSAL 782

Query: 744 REAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVG 803
           REA+DSGFTYLLAHGDVRAKK SFF KKLVINYFYAFLR+NCRAGAANMSVPHMNILQVG
Sbjct: 783 REAMDSGFTYLLAHGDVRAKKNSFFFKKLVINYFYAFLRKNCRAGAANMSVPHMNILQVG 842

Query: 804 MTYMV 808
           MTYMV
Sbjct: 843 MTYMV 847

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255587597|ref|XP_002534326.1| Potassium transporter, putative [Ricinus communis] gi|223525500|gb|EEF28062.1| Potassium transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359473336|ref|XP_002264951.2| PREDICTED: putative potassium transporter 12-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449481295|ref|XP_004156141.1| PREDICTED: LOW QUALITY PROTEIN: putative potassium transporter 12-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147771544|emb|CAN75896.1| hypothetical protein VITISV_038659 [Vitis vinifera] Back     alignment and taxonomy information
>gi|18138061|emb|CAD20577.1| putative potassium transporter [Vicia faba] Back     alignment and taxonomy information
>gi|356526821|ref|XP_003532015.1| PREDICTED: putative potassium transporter 12-like [Glycine max] Back     alignment and taxonomy information
>gi|297837505|ref|XP_002886634.1| potassium transporter family protein [Arabidopsis lyrata subsp. lyrata] gi|297332475|gb|EFH62893.1| potassium transporter family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|42562825|ref|NP_176222.2| putative potassium transporter 12 [Arabidopsis thaliana] gi|38502862|sp|O80739.2|POT12_ARATH RecName: Full=Putative potassium transporter 12; Short=AtPOT12 gi|332195542|gb|AEE33663.1| putative potassium transporter 12 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|115478905|ref|NP_001063046.1| Os09g0376900 [Oryza sativa Japonica Group] gi|75122939|sp|Q6H4R6.1|HAK23_ORYSJ RecName: Full=Potassium transporter 23; AltName: Full=OsHAK23 gi|49387698|dbj|BAD26044.1| putative HAK2 [Oryza sativa Japonica Group] gi|49389043|dbj|BAD26283.1| putative HAK2 [Oryza sativa Japonica Group] gi|113631279|dbj|BAF24960.1| Os09g0376900 [Oryza sativa Japonica Group] gi|125605507|gb|EAZ44543.1| hypothetical protein OsJ_29162 [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query808
TAIR|locus:2195688827 AT1G60160 [Arabidopsis thalian 0.694 0.678 0.712 1.1e-302
TAIR|locus:2184722858 KUP7 "K+ uptake permease 7" [A 0.678 0.638 0.543 7.4e-222
TAIR|locus:2134153855 KUP5 "K+ uptake permease 5" [A 0.679 0.642 0.559 8.1e-219
TAIR|locus:2044717793 KUP11 "K+ uptake permease 11" 0.668 0.680 0.450 5.4e-171
TAIR|locus:2029589796 KUP10 "K+ uptake permease 10" 0.674 0.684 0.449 8.8e-171
TAIR|locus:2142110785 HAK5 "high affinity K+ transpo 0.658 0.677 0.418 2.4e-166
TAIR|locus:2045639712 KT1 "potassium transporter 1" 0.498 0.566 0.482 1.6e-163
TAIR|locus:2185515781 KUP8 "potassium uptake 8" [Ara 0.498 0.516 0.491 2.5e-163
TAIR|locus:2061838794 KT2 "potassium transporter 2" 0.496 0.505 0.481 7.6e-162
TAIR|locus:2078688789 KUP3 "AT3G02050" [Arabidopsis 0.679 0.695 0.417 3.7e-159
TAIR|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2096 (742.9 bits), Expect = 1.1e-302, Sum P(2) = 1.1e-302
 Identities = 407/571 (71%), Positives = 465/571 (81%)

Query:   238 ILTPAISVMSAVSGLQGEIHGFGEILALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLF 297
             IL    S+    +G  G +  F  +LALWFFSLG+IG+YNL+KYD +V+RA NP YI LF
Sbjct:   267 ILVALFSIQRFGTGKVGFL--FAPVLALWFFSLGAIGIYNLLKYDFTVIRALNPFYIVLF 324

Query:   298 FKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYL 357
             F KN K AWSALGGCVLCITGAEAMFADLGHFSV++IQ+AFT VVFPCLLLAYMGQAAYL
Sbjct:   325 FNKNSKQAWSALGGCVLCITGAEAMFADLGHFSVRSIQMAFTCVVFPCLLLAYMGQAAYL 384

Query:   358 MKYPDSANRIFYDSVPDSLFWPVFVXXXXXXXXXXXXXXXXTFSCIKQAMALGCFPRLKI 417
              K+P+++ RIFYDSVP SLFWPVFV                TFSC+KQAMALGCFPRLKI
Sbjct:   385 TKHPEASARIFYDSVPKSLFWPVFVIATLAAMIASQAMISATFSCVKQAMALGCFPRLKI 444

Query:   418 IHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVM 477
             IHTS+KR+GQIYIPVINWFLMIMC++VVSIF+STT IANAYGIAEVGVM+VS+ LVT+VM
Sbjct:   445 IHTSKKRIGQIYIPVINWFLMIMCILVVSIFRSTTHIANAYGIAEVGVMMVSTVLVTLVM 504

Query:   478 LLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVL 537
             LLIWQTN+ L LCFPL+FGSVE +Y+ AVL+KI EGGW+PL FA+ FL VMYIWNYGSVL
Sbjct:   505 LLIWQTNIFLALCFPLIFGSVETIYLLAVLTKILEGGWVPLVFATFFLTVMYIWNYGSVL 564

Query:   538 KYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIV 597
             KY+SEVRE+ISMDF+ +LGSTLGT+R+PGIGLLYNELVQGIPSIFGQFLL+LPAIHSTI+
Sbjct:   565 KYQSEVRERISMDFMRELGSTLGTIRIPGIGLLYNELVQGIPSIFGQFLLTLPAIHSTII 624

Query:   598 FVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEK 657
             FVCIKYVPVP+V  EERFLFRRV PKDYHMFRC+ RYGYKDVRKED  VFEQLL+ SLEK
Sbjct:   625 FVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKEDSRVFEQLLIESLEK 684

Query:   658 FLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPLMHERRFDXXXXXXXX 717
             FLR EA + ALE  L + D D VSVAS D     +Y T++L  PL+H  +          
Sbjct:   685 FLRCEALEDALESTLNDFDPDRVSVAS-D-----TY-TDDLMAPLIHRAKRSEPEQELDS 737

Query:   718 XXXXXXXXXVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYF 777
                        +++EDP+LEYEL+ALREA DSG TYLLAHGDVRAKK S F+KKLVINYF
Sbjct:   738 EVLPSSSVG-SSMEEDPALEYELAALREATDSGLTYLLAHGDVRAKKNSIFVKKLVINYF 796

Query:   778 YAFLRRNCRAGAANMSVPHMNILQVGMTYMV 808
             YAFLRRNCRAGAAN++VPHMNILQ GMTYMV
Sbjct:   797 YAFLRRNCRAGAANLTVPHMNILQAGMTYMV 827
GO:0005634 "nucleus" evidence=ISM
GO:0006813 "potassium ion transport" evidence=ISS
GO:0015079 "potassium ion transmembrane transporter activity" evidence=IEA;ISS
GO:0016020 "membrane" evidence=IEA
GO:0071805 "potassium ion transmembrane transport" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
TAIR|locus:2184722 KUP7 "K+ uptake permease 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134153 KUP5 "K+ uptake permease 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2142110 HAK5 "high affinity K+ transporter 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045639 KT1 "potassium transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2185515 KUP8 "potassium uptake 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078688 KUP3 "AT3G02050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O80739POT12_ARATHNo assigned EC number0.72820.97890.9564yesno
Q6H4R6HAK23_ORYSJNo assigned EC number0.68730.97770.9007yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_LG_X000361
potassium ion transporter family protein (847 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query808
PLN00151852 PLN00151, PLN00151, potassium transporter; Provisi 0.0
PLN00150779 PLN00150, PLN00150, potassium ion transporter fami 0.0
PLN00148785 PLN00148, PLN00148, potassium transporter; Provisi 0.0
PLN00149779 PLN00149, PLN00149, potassium transporter; Provisi 0.0
TIGR00794688 TIGR00794, kup, potassium uptake protein 0.0
pfam02705534 pfam02705, K_trans, K+ potassium transporter 0.0
COG3158627 COG3158, Kup, K+ transporter [Inorganic ion transp 1e-136
PRK10745622 PRK10745, trkD, potassium transport protein Kup; P 5e-97
>gnl|CDD|215079 PLN00151, PLN00151, potassium transporter; Provisional Back     alignment and domain information 
 Score = 1454 bits (3765), Expect = 0.0
 Identities = 559/852 (65%), Positives = 662/852 (77%), Gaps = 44/852 (5%)

Query: 1   MEEEDK-IEESSVRLLTSVGSGGGGESRWVDGSEVDSESPPWSLSEENG--------ARE 51
           MEEE      SS      +     GESRWVDGSE DSE P     +++           E
Sbjct: 1   MEEESSGGIGSSSNGSGGLVGTDSGESRWVDGSEDDSEDPASLDDDDDDRDSGGGMLEEE 60

Query: 52  GFGSMRRRLVKKPK-YDSLDVEAMEIAGAFGDHSKDVSVWHTLALAFQTLGVVYGDMGTS 110
             G+MRRRL++ P   DS DVEAMEI GA    S+D+SV  TLALAFQTLGVV+GD+GTS
Sbjct: 61  EDGNMRRRLIRTPPRVDSFDVEAMEIPGAHRHDSEDLSVGRTLALAFQTLGVVFGDVGTS 120

Query: 111 PLYVYSDVFSKVQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSL 170
           PLY +S +FSKV I++E DVLGALSLV+YT+ LIPLAKYV VVL AND+GEGGTFALYSL
Sbjct: 121 PLYTFSVMFSKVPIKSEEDVLGALSLVLYTLILIPLAKYVLVVLWANDDGEGGTFALYSL 180

Query: 171 ISRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGT 230
           I R+AKV++LPN+ P+DE+ISSFRLKLPTPELER+L++K+ LE +S LK LLLLLVL GT
Sbjct: 181 ICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKERLETSSLLKKLLLLLVLAGT 240

Query: 231 SLIIGDGILTPAISVMSAVSGLQGEIHGFGE----------------------------- 261
           S++IGDG+LTPA+SVMSAVSGL+  + GFG+                             
Sbjct: 241 SMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAF 300

Query: 262 --ILALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGA 319
              LALWF SLG IG+YNLVKYD SV RAFNP+YIY FFK+N   AWSALGGCVLC TG+
Sbjct: 301 GPALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGS 360

Query: 320 EAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWP 379
           EAMFADLG+FSV++IQ+AFT +V PCLLLAYMGQAAYLMK PDSA +IF+ SVP SLFWP
Sbjct: 361 EAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWP 420

Query: 380 VFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMI 439
           VF++A LAA+IAS+AM +ATFSCIKQ+MALGCFPRLKIIHTSRK MGQIYIPVINWFL++
Sbjct: 421 VFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLV 480

Query: 440 MCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVE 499
           MC+VVV  F+S TDI NAYGIAEVGVM+VS+ LVT+VMLLIWQTN+ LVLCFP+VF SVE
Sbjct: 481 MCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVE 540

Query: 500 LLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTL 559
           L++ S+VLS + +GGW+PL FASVFLC+MYIWNYGS LKY+SEVR+K+SMD + +LGS L
Sbjct: 541 LVFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNL 600

Query: 560 GTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRR 619
           GT+R PGIGLLYNELV+GIP+IFG FL +LPAIHSTI+FVCIKYVPVP+V  EERFLFRR
Sbjct: 601 GTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRR 660

Query: 620 VGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDS 679
           V PKDYHMFRC+ RYGYKDVRKE+H  FEQLL+ SLEKF+R+EAQ+ ALE +  +   D 
Sbjct: 661 VCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDE 720

Query: 680 VSVASRDPEASGSYGTEELKIPLMHERR---FDESGTSASEETTSALPSSVMALDEDPSL 736
            SV S     + +     L +PL+ + R         S SEE +  LPSS M+ DED SL
Sbjct: 721 DSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMSSDEDQSL 780

Query: 737 EYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPH 796
           EYELS +REA +SG  YLL HGDVRA+K S+F+KKLVINYFYAFLR+NCR G AN+SVPH
Sbjct: 781 EYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPH 840

Query: 797 MNILQVGMTYMV 808
            NI+QVGMTYMV
Sbjct: 841 SNIMQVGMTYMV 852

Length = 852
>gnl|CDD|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional Back     alignment and domain information
>gnl|CDD|215077 PLN00148, PLN00148, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|177753 PLN00149, PLN00149, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|129876 TIGR00794, kup, potassium uptake protein Back     alignment and domain information
>gnl|CDD|217193 pfam02705, K_trans, K+ potassium transporter Back     alignment and domain information
>gnl|CDD|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|182693 PRK10745, trkD, potassium transport protein Kup; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 808
PLN00151852 potassium transporter; Provisional 100.0
PLN00150779 potassium ion transporter family protein; Provisio 100.0
PLN00149779 potassium transporter; Provisional 100.0
PLN00148785 potassium transporter; Provisional 100.0
TIGR00794688 kup potassium uptake protein. Proteins of the KUP 100.0
PRK10745622 trkD potassium transport protein Kup; Provisional 100.0
COG3158627 Kup K+ transporter [Inorganic ion transport and me 100.0
PF02705534 K_trans: K+ potassium transporter; InterPro: IPR00 100.0
TIGR00911501 2A0308 L-type amino acid transporter. 83.06
>PLN00151 potassium transporter; Provisional Back     alignment and domain information 
Probab=100.00  E-value=4e-256  Score=2167.41  Aligned_cols=794  Identities=69%  Similarity=1.129  Sum_probs=710.3

Q ss_pred             hhccccCCCCCCccccccccccCCCCCCCCccccccccc---------CCCccccccccc-ccccccchhhhhhccccCC
Q 003603           13 RLLTSVGSGGGGESRWVDGSEVDSESPPWSLSEENGARE---------GFGSMRRRLVKK-PKYDSLDVEAMEIAGAFGD   82 (808)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~r~d~~~~ea~~~~~~~~~   82 (808)
                      ...+...+++|.||||||++|+|+|+++ ++++|+++++         ++++.|+|+||+ ||+||||+||++++++++|
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~e~~~~~~~~~~   92 (852)
T PLN00151         14 NGSGGLVGTDSGESRWVDGSEDDSEDPA-SLDDDDDDRDSGGGMLEEEEDGNMRRRLIRTPPRVDSFDVEAMEIPGAHRH   92 (852)
T ss_pred             CccCCcccCCCCCcccccCccccccCCc-ccccccccccccCCccccccccchhhhHhhCCCccchhhhccccccccccc
Confidence            3355566677999999999999998877 5555555443         567889999999 9999999999999998887


Q ss_pred             CCCcchHHHHHHHHHhccceeecccCcchHHHHHHhhccCCCCCccceehhHHHHHHHHHHHhhheeeEEEEEecCCCCc
Q 003603           83 HSKDVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSKVQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEG  162 (808)
Q Consensus        83 ~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~dvlGvLSLIfWtL~Liv~iKYv~ivL~Adn~GEG  162 (808)
                      |.++.++|+++.|||||||||||||||||||||+++|.+.++++++||+|+||||||||||||++|||+|||||||||||
T Consensus        93 ~~~~~~~w~~l~La~qslGVVyGDIGTSPLYv~~s~F~~~~~~~~~dIlGvLSLIfWtLtLiv~iKYV~iVLrAdd~GEG  172 (852)
T PLN00151         93 DSEDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKVPIKSEEDVLGALSLVLYTLILIPLAKYVLVVLWANDDGEG  172 (852)
T ss_pred             ccccccHHHHHHHHHhhhceEeCcCCCCHHHHHHHHhcCCCCCChhheeeehHHHHHHHHHHHHHhheeEEEEecCCCCc
Confidence            77788888999999999999999999999999999997534579999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHhhhcccccCCCCCCccchhhccccCCCChhhHHHHHHHHHHhhcchhHHHHHHHHhhhhhhhcccccccch
Q 003603          163 GTFALYSLISRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPA  242 (808)
Q Consensus       163 GtfALysLi~r~a~~~~~p~~~~~d~~~s~~~~~~~~~~~~~~~~~k~~le~s~~~~~~l~~l~l~G~sm~igDGvlTPA  242 (808)
                      ||||||||+|||+|++++||||++|+++|+|+++.|+++++|+.|+|++||+|+++|.++++++++||||+|||||||||
T Consensus       173 GtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~lE~s~~~k~~ll~l~l~GtamviGDGvlTPA  252 (852)
T PLN00151        173 GTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKERLETSSLLKKLLLLLVLAGTSMVIGDGVLTPA  252 (852)
T ss_pred             hHHHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhccccccccc-------------------------------chhHHHHHHHHHhhhhhhhccccCcceeeecCh
Q 003603          243 ISVMSAVSGLQGEIHG-------------------------------FGEILALWFFSLGSIGLYNLVKYDISVVRAFNP  291 (808)
Q Consensus       243 ISVLSAVeGL~v~~p~-------------------------------FgPImllWF~~i~~iGiynI~~~~p~Vl~A~nP  291 (808)
                      ||||||||||++++|+                               |||||++||++||++|+|||++|||+||+||||
T Consensus       253 ISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl~i~~iGiynI~~~~p~Vl~AlnP  332 (852)
T PLN00151        253 MSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGIGIYNLVKYDSSVFRAFNP  332 (852)
T ss_pred             hhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhhCH
Confidence            9999999999999987                               999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCcchhhhhhhhHHhhhhhhhhhhccCCCCcchhhhhhHHhHHHHHHhhhhhhhhHhhcCCCcccCccccc
Q 003603          292 IYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDS  371 (808)
Q Consensus       292 ~yai~ff~~~~~~g~~~LG~VvLciTGaEALyADlGHFg~~~Iqiaw~~~V~PaLlL~Y~GQgA~Ll~~p~~~~npFy~s  371 (808)
                      +||++||+|||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++++||||++
T Consensus       333 ~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~s  412 (852)
T PLN00151        333 VYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSS  412 (852)
T ss_pred             HHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCcchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHcCCCcceeEEecCCccCCceeehhhHHHHHHHhheeeEEeCCh
Q 003603          372 VPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQST  451 (808)
Q Consensus       372 iP~~~~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR~kI~hTS~~~~GQIYIP~VNw~Lmi~~i~vv~~F~~s  451 (808)
                      +|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||++++||||||+|||+||++|++||++||+|
T Consensus       413 vP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s  492 (852)
T PLN00151        413 VPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVMCLVVVCSFRSI  492 (852)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHhheeeecCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhcchhhHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhHhcccCCCcHHHHHHHHHHHhhhhh
Q 003603          452 TDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIW  531 (808)
Q Consensus       452 ~~l~~AYGiAV~~vM~iTT~L~~~vm~~vw~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pL~ia~v~~~iM~tW  531 (808)
                      ++|||||||||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++|
T Consensus       493 ~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W  572 (852)
T PLN00151        493 TDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIW  572 (852)
T ss_pred             HHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCcchHHHHHhhhcCccceEEEEEEEEEecccccCC
Q 003603          532 NYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRL  611 (808)
Q Consensus       532 ~~G~~~~~~~~~~~~~s~~~~~~~~~~~~~~rvpG~avf~t~~~~giP~~~~h~l~~~~~lH~~~Vfv~ik~~~vP~V~~  611 (808)
                      |||++++|+++.++++|++++.++.++.++.||||+|+|||++++|+|++|.||++|||++||++||||||++|+|+||+
T Consensus       573 ~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~  652 (852)
T PLN00151        573 NYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQ  652 (852)
T ss_pred             HHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccCh
Confidence            99999999999999999999999999888999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEEecCCCCCEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc-ccCCCCCCC
Q 003603          612 EERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVS-VASRDPEAS  690 (808)
Q Consensus       612 ~eR~~v~~l~~~~~~~~r~v~ryGy~d~~~~~~~~f~~~l~~~L~~fi~~E~~~~~l~~~~~~~~~~~~~-~~~~~~~~~  690 (808)
                      +|||+++|+++++|++|||++||||||..++++++||++|+++|++|||+|+.+..++++..+..+++.+ ........+
T Consensus       653 ~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (852)
T PLN00151        653 EERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDEDSVTSSRVLIAP  732 (852)
T ss_pred             hheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccCC
Confidence            9999999999999999999999999999874489999999999999999998632222111000001000 000000000


Q ss_pred             CCCCccccccccccccccccCC-CCCcccccCCCC-Cccccc-CCCCcHHHhHHHHHHhHhcCcEEEEeeceEEecCCcc
Q 003603          691 GSYGTEELKIPLMHERRFDESG-TSASEETTSALP-SSVMAL-DEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSF  767 (808)
Q Consensus       691 ~~~s~~~~~~~~~~~~~~~~~~-~~~s~s~~~~~~-~~r~~~-~~~~~~~~e~~~l~~a~e~GVvY~LG~~~V~A~k~S~  767 (808)
                      + ++..+...|.+.......++ ..+..++....+ ..+... +.++++++|+++|++|+|+||+|++||++|+||++|+
T Consensus       733 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~  811 (852)
T PLN00151        733 N-GSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMSSDEDQSLEYELSFIREAKESGVVYLLGHGDVRARKNSW  811 (852)
T ss_pred             C-cccccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCc
Confidence            0 00111111111110000000 000011000001 011111 3346889999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccccccccccCCCCEEEeeeEEEC
Q 003603          768 FLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV  808 (808)
Q Consensus       768 ~~KKi~i~~~y~fLrrN~r~~~~~l~IP~~rlleVG~~yeI  808 (808)
                      ++||+++|++|+|||||||++.+.|+|||+|+|||||+|+|
T Consensus       812 ~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v  852 (852)
T PLN00151        812 FIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV  852 (852)
T ss_pred             HHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence            99999999999999999999999999999999999999997

>PLN00150 potassium ion transporter family protein; Provisional Back     alignment and domain information
>PLN00149 potassium transporter; Provisional Back     alignment and domain information
>PLN00148 potassium transporter; Provisional Back     alignment and domain information
>TIGR00794 kup potassium uptake protein Back     alignment and domain information
>PRK10745 trkD potassium transport protein Kup; Provisional Back     alignment and domain information
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members Back     alignment and domain information
>TIGR00911 2A0308 L-type amino acid transporter Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query808
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 53.7 bits (128), Expect = 2e-07
 Identities = 109/695 (15%), Positives = 181/695 (26%), Gaps = 264/695 (37%)

Query: 118 VFSKVQIETEIDVLGALSLVMYTITLIPLAK-----YVFV--VLKANDNGEGGTFALYS- 169
           + SK +I+  I    A+S  +     + L+K       FV  VL+ N          Y  
Sbjct: 45  ILSKEEIDHIIMSKDAVSGTLRLFWTL-LSKQEEMVQKFVEEVLRIN----------YKF 93

Query: 170 LISRYAKVNMLP-----------NRQPADEQISSFRLKLPTPELERALQLKDILERTSSL 218
           L+S        P           +R   D Q+  F  K     L+  L+L+  L      
Sbjct: 94  LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV--FA-KYNVSRLQPYLKLRQALLE---- 146

Query: 219 KTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGE-ILALWFFSLGSIGLYN 277
                               L PA +V      + G + G G+  +AL            
Sbjct: 147 --------------------LRPAKNV-----LIDG-VLGSGKTWVAL------------ 168

Query: 278 LVKYDISVVRAF-NPIYIYLFFKKNGKDAWSALGGCV-----------LCITGAEAMFAD 325
            V     V       I+            W  L  C            L     +  +  
Sbjct: 169 DVCLSYKVQCKMDFKIF------------WLNLKNCNSPETVLEMLQKLLYQ-IDPNWTS 215

Query: 326 LGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAA 385
               S        ++      LL           Y +    +   +V ++  W       
Sbjct: 216 RSDHSSNIKLRIHSIQAELRRLLK-------SKPYENCL--LVLLNVQNAKAW------- 259

Query: 386 LAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVV 445
                               A  L C    KI+ T+R      +  V + FL       +
Sbjct: 260 -------------------NAFNLSC----KILLTTR------FKQVTD-FLSAATTTHI 289

Query: 446 SIFQS----TTD-----IANAYGI--------AEVGVMLVSSTLVTIV--MLLIWQTNLL 486
           S+       T D     +                       S +   +   L  W  N  
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD-NWK 348

Query: 487 LVLCFPL---VFGSVELL--------YMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGS 535
            V C  L   +  S+ +L        +    LS       +P     + L +  IW    
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAEYRKMFDR--LSVFPPSAHIP---TIL-LSL--IWFDVI 400

Query: 536 VLKYRSEVREKISMDF----LLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPA 591
                      +        L++      T+ +P I L     ++              A
Sbjct: 401 -----KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN-----------EYA 444

Query: 592 IHSTIV--------FVCIKYVPVPM--------------VRLEERF-LFRRVGPKDYHMF 628
           +H +IV        F     +P  +              +   ER  LFR V    +  F
Sbjct: 445 LHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMV----FLDF 500

Query: 629 R------------CVTRYG----------YKDVRKEDHHVFEQLLVASLEKFLRKEAQDL 666
           R                            YK    ++   +E+L V ++  FL K     
Sbjct: 501 RFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERL-VNAILDFLPK----- 554

Query: 667 ALERNLLESD-LDSVSVASRDPEASGSYGTEELKI 700
            +E NL+ S   D + +A    +    +     ++
Sbjct: 555 -IEENLICSKYTDLLRIALMAED-EAIFEEAHKQV 587
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00