Citrus Sinensis ID: 003662


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-----
MGESAVCLEVPADGEMDVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSEVSNPVVSPKEFTSSLQDITSQETKLVTESCNQVLSTTSTGNLSSEETLSDGDERTESSYAETSRTDNNSGDVSKSHVVLEIPKHVSSSSGIRKITFKFSKRKEDYVAPLAYEEGRNYTLYDDLGSSGANDGVLCARNMEIKMSKKVVPNEYPTNVKKLLSTGILDGACVKYISTSRERQLDGIVNGGGYLCGCPLCNFSKVVSAHEFEQHAGAKTRHPNNHIYLENGKPIYSIIQELKTAPLGILEEVVKKVAGSSFNEGSFRVWKASHHLRKGLVEHDEKHNMKLPSLPHSIISCSSLALEESISPTSCSFVQDTGREQTHMKEMLEERKRGVKRPFMHQKRTAEGGTKKRDNDLHRLLFLPNGLPDGERLTYIVKGQRLRFGCKQGNGIVCDCCNKEISPSQFEAHAGMAARRQPYRHIYTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDFVSNRAQTIPASSLSTINRKHIEKGILFDGTMNDVQWQMLKKAQCFEEKEKSLLSSATAIFRECFDPIIAECGRDLIPVMVYGRNISGQEFGGMYSVILTVKSVVVSAGLLRIFGREVAELPLVATCREYQGKGCFQALFSCIERLLCSLNVENLVLPACLPE
ccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccHHHHcccccccccccHHHHHHHHHccccccEEEEcccccccEEEEEEEcccEEEccccccccEEEEHHHHccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccEEEEccccccccccEEEEEccEEEEEEEEEcccEEEccccccccccHHHHcccccccccccccccccccccccHHHHHHHccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccEEEccccccHHHHHccccccccccccccccccccccccccccccccccccccHHHcccccccHHHHHHHHccccccccccccccccccccccccHHHcccccccccccccEEEEEEEccEEEEEEEEEEEccEEEEcEEEEEEcccccccHHHHHHHHHHHHHHcccccEEEEcccccc
ccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccEEEEEcccccEEEEEEEccccEEEccccccccEEEcHHHHHHHccccccccccEEEEcccccHHHHHHHHHHccHHHHHHHHHHHHcccccccccHEEHHHHcHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEcccccccccccccccccccccHHHHEEcccccccccEEEEEEcccEEEEEEEEccEEEEcccccEEcHHHHHHHcccccccccccEEEEcccccHHHHHHHHHHccccccccccccccEcccccEEEEEcccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEccccccccEcccccEEEEEccccHHHccHcccccccccccccccccEccccccHHHHHHHHHHHccccccccccccEEEccccccccccccccccccHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccccccHEEEccccccccccEEEEEEEEEccEEEEEEEEEEEccEEEEccEEEccHHHHccHHHHHHHHHHHHHHHHccccEEEEcccccc
mgesavclevpadgemdvecssrteskqdrelltdnvesdsfpngkhakeealnddiksevsnpvvspkeftsslQDITSQETKLVTESCNQVLSttstgnlsseetlsdgdertessyaetsrtdnnsgdvskshvvleipkhvssssgirKITFKFSkrkedyvaplayeegrnytlyddlgssgandgvLCARNMEikmskkvvpneyptNVKKLLSTGILDGACVKYISTSRerqldgivngggylcgcplcnfskvvsahefeqhagaktrhpnnhiylengkPIYSIIQELKTAPLGILEEVVKKVAgssfnegsFRVWKASHHLRKGlvehdekhnmklpslphsiiscsslaleesisptscsfvQDTGREQTHMKEMLEERkrgvkrpfmhqkrtaeggtkkrdndlhrllflpnglpdgerltYIVKGQRlrfgckqgngivcdccnkeispsqFEAHAGMaarrqpyrhiytsngmtLHDIAISLAMgqrrttggsddmchvcgdgenlllcngcplafhaacldpllipesgwrcpncrqghsssmsrsvdlkggleapgaevggcvicrshdfsaatfddrtviycdqcekefhvgclrknglcdlkeipkdkwfccddcnRIHAALQDFVsnraqtipasslstINRKHIekgilfdgtMNDVQWQMLKKAQCFEEKEKSLLSSATAIFRECFDPIiaecgrdlipvmvygrnisgqefggMYSVILTVKSVVVSAGLLRIFgrevaelplvATCREYQGKGCFQALFSCIERLLCSLnvenlvlpaclpe
mgesavclevpadgemdvecssrteskqdrelltdnvesdsfpngKHAKeealnddiksevsnPVVSPKEFTSSLQDITSQETKLVTESCNQVlsttstgnlsseetlsdgdertessyaetsrtdnnsgdvskshvvleipkhvssssgirkitfkfskrkedyvaplaYEEGRNYTLYDDLGSSGANDGVLCARNMEIKmskkvvpneypTNVKKLLSTGILDGACVKYISTSRERQLDGIVNGGGYLCGCPLCNFSKVVSAHEFEQhagaktrhpnnhIYLENGKPIYSIIQELKTAPLGILEEVVKKVAGSSFNEGSFRVWKASHHLRKGLVEHDEKHNMKLPSLPHSIISCSSLALEESISPTSCSFVQDTGREQTHMKEMLeerkrgvkrpfmhqkrtaeggtkkrdndlhrllflpnglpdgeRLTYIVKGQRLRFGCKQGNGIVCDCCNKEISPSQFEAHAGMAARRQPYRHIYTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDFVSNRAQtipasslstinrKHIEKGILFDGTMNDVQWQMLKKAQCFEEKEKSLLSSATAIFRECFDPIIAECGRDLIPVMVYGRNISGQEFGGMYSVILTVKSVVVSAGLLRIFGREVAELPLVATCREYQGKGCFQALFSCIERLLCSLNVenlvlpaclpe
MGESAVCLEVPADGEMDVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSEVSNPVVSPKEFTSSLQDITSQETKLVTESCNQVLSTTSTGNLSSEETLSDGDERTESSYAETSRTDNNSGDVSKSHVVLEIPKHVSSSSGIRKITFKFSKRKEDYVAPLAYEEGRNYTLYDDLGSSGANDGVLCARNMEIKMSKKVVPNEYPTNVKKLLSTGILDGACVKYISTSRERQLDGIVNGGGYLCGCPLCNFSKVVSAHEFEQHAGAKTRHPNNHIYLENGKPIYSIIQELKTAPLGILEEVVKKVAGSSFNEGSFRVWKASHHLRKGLVEHDEKHNMKLPSLPHSIISCSSLALEESISPTSCSFVQDTGREQTHMKEMLEERKRGVKRPFMHQKRTAEGGTKKRDNDLHRLLFLPNGLPDGERLTYIVKGQRLRFGCKQGNGIVCDCCNKEISPSQFEAHAGMAARRQPYRHIYTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDFVSNRAQTIPASSLSTINRKHIEKGILFDGTMNDVQWQMLKKAQCFEEKEKSLLSSATAIFRECFDPIIAECGRDLIPVMVYGRNISGQEFGGMYSVILTVKSVVVSAGLLRIFGREVAELPLVATCREYQGKGCFQALFSCIERLLCSLNVENLVLPACLPE
******************************************************************************************************************************************************IRKITFKFSKRKEDYVAPLAYEEGRNYTLYDDLGSSGANDGVLCARNMEIKMSKKVVPNEYPTNVKKLLSTGILDGACVKYISTSRERQLDGIVNGGGYLCGCPLCNFSKVVSAHEFEQHAGAKTRHPNNHIYLENGKPIYSIIQELKTAPLGILEEVVKKVAGSSFNEGSFRVWKASHHLRKGLV****************IISC***********************************************************LHRLLFLPNGLPDGERLTYIVKGQRLRFGCKQGNGIVCDCCNKEISPSQFEAHAGMAARRQPYRHIYTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNC*******************APGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDFVSNRAQTIPASSLSTINRKHIEKGILFDGTMNDVQWQMLKKAQCFEEKEKSLLSSATAIFRECFDPIIAECGRDLIPVMVYGRNISGQEFGGMYSVILTVKSVVVSAGLLRIFGREVAELPLVATCREYQGKGCFQALFSCIERLLCSLNVENLVLPACL**
****AVC****************************************************************************************************************************************************************************************************************KKLLSTGILDGACVKYISTSRERQLDGIVNGGGYLCGCPLCNFSKVVSAHE***************IYLENGKPIYSIIQE**************************************************PS**HSI******************************************************************LFLPNGLPDGERLTYIV*********KQGNGIVCDCCNKEISPSQFEAHA**********HIYTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCR*************KGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDFVSNRAQTIPASSLSTINRKH************DVQWQMLKKAQCFEEKEKSLLSSATAIFRECFDPIIAECGRDLIPVMVYGRNISGQEFGGMYSVILTVKSVVVSAGLLRIFGREVAELPLVATCREYQGKGCFQALFSCIERLLCSLNVENLVLPACLP*
MGESAVCLEVPADG****************ELLTDNVESDSFPNGKHAKEEALNDDIKSEVSNPVVSPKEFTSSLQDITSQETKLVTESCNQVLST*************************************KSHVVLEIPKHVSSSSGIRKITFKFSKRKEDYVAPLAYEEGRNYTLYDDLGSSGANDGVLCARNMEIKMSKKVVPNEYPTNVKKLLSTGILDGACVKYISTSRERQLDGIVNGGGYLCGCPLCNFSKVVSAHEFEQHAGAKTRHPNNHIYLENGKPIYSIIQELKTAPLGILEEVVKKVAGSSFNEGSFRVWKASHHLRKGLVEHDEKHNMKLPSLPHSIISCSSLALEESISPTSCSFVQDTGREQTHMKEMLEERKRGVKRPFMHQKRTAEGGTKKRDNDLHRLLFLPNGLPDGERLTYIVKGQRLRFGCKQGNGIVCDCCNKEISPSQFEAHAGMAARRQPYRHIYTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNC*************LKGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDFVSNRAQTIPASSLSTINRKHIEKGILFDGTMNDVQWQMLKKAQCFEEKEKSLLSSATAIFRECFDPIIAECGRDLIPVMVYGRNISGQEFGGMYSVILTVKSVVVSAGLLRIFGREVAELPLVATCREYQGKGCFQALFSCIERLLCSLNVENLVLPACLPE
****AV****PA***********************************************************************************************************************************************************************************************KKVVPNEYPTNVKKLLSTGILDGACVKYISTSRERQLDGIVNGGGYLCGCPLCNFSKVVSAHEFEQHAGAKTRHPNNHIYLENGKPIYSIIQELKTAPLGILEEVVKKVAGSSFNEGSFRVWKASHHLR********************************************************************************DNDLHRLLFLPNGLPDGERLTYIVKGQRLRFGCKQGNGIVCDCCNKEISPSQFEAHAGMAARRQPYRHIYTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQGHSSS******************GGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDFVSNRAQTIPASSLSTINRKHIEKGILFDGTMNDVQWQMLKKAQCFEEKEKSLLSSATAIFRECFDPIIAECGRDLIPVMVYGRNISGQEFGGMYSVILTVKSVVVSAGLLRIFGREVAELPLVATCREYQGKGCFQALFSCIERLLCSLNVENLVLPAC***
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MGESAVCLEVPADGEMDVECSSRTESKQDRELLTDNVESDSFPNGKHAKEEALNDDIKSEVSNPVVSPKEFTSSLQDITSQETKLVTESCNQVLSTTSTGNLSSEETLSDGDERTESSYAETSRTDNNSGDVSKSHVVLEIPKHVSSSSGIRKITFKFSKRKEDYVAPLAYEEGRNYTLYDDLGSSGANDGVLCARNMEIKMSKKVVPNEYPTNVKKLLSTGILDGACVKYISTSRERQLDGIVNGGGYLCGCPLCNFSKVVSAHEFEQHAGAKTRHPNNHIYLENGKPIYSIIQELKTAPLGILEEVVKKVAGSSFNEGSFRVWKASHHLRKGLVEHDEKHNMKLPSLPHSIISCSSLALEESISPTSCSFVQDTGREQTHMKEMLEERKRGVKRPFMHQKRTAEGGTKKRDNDLHRLLFLPNGLPDGERLTYIVKGQRLRFGCKQGNGIVCDCCNKEISPSQFEAHAGMAARRQPYRHIYTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQGHSSSMSRSVDLKGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNRIHAALQDFVSNRAQTIPASSLSTINRKHIEKGILFDGTMNDVQWQMLKKAQCFEEKEKSLLSSATAIFRECFDPIIAECGRDLIPVMVYGRNISGQEFGGMYSVILTVKSVVVSAGLLRIFGREVAELPLVATCREYQGKGCFQALFSCIERLLCSLNVENLVLPACLPE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query805 2.2.26 [Sep-21-2011]
Q8TDI0 1954 Chromodomain-helicase-DNA yes no 0.227 0.093 0.261 6e-11
Q14839 1912 Chromodomain-helicase-DNA no no 0.131 0.055 0.311 7e-11
Q6PDQ2 1915 Chromodomain-helicase-DNA no no 0.131 0.055 0.311 8e-11
Q12873 2000 Chromodomain-helicase-DNA no no 0.134 0.054 0.290 6e-08
Q22516 1787 Chromodomain-helicase-DNA yes no 0.124 0.055 0.297 1e-07
O97159 1982 Chromodomain-helicase-DNA no no 0.122 0.049 0.292 2e-07
O14686 5537 Histone-lysine N-methyltr no no 0.147 0.021 0.303 4e-07
Q9Z0E3552 Autoimmune regulator OS=M no no 0.058 0.085 0.551 5e-07
O43918545 Autoimmune regulator OS=H no no 0.057 0.084 0.541 5e-07
Q6PDK2 5588 Histone-lysine N-methyltr no no 0.119 0.017 0.315 9e-07
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5 PE=2 SV=1 Back     alignment and function desciption
 Score = 70.1 bits (170), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 80/210 (38%), Gaps = 27/210 (12%)

Query: 509 DMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCR----QGHSSSMSRSV 562
           D C VC  G  ++LC+ CP A+H  CLDP L   PE  W CP+C     Q          
Sbjct: 344 DYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDEE 403

Query: 563 DLKGGLEAPGAEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEI 622
           +  G  E     +  C +C+         D   ++ CD C   +H+ CL       L EI
Sbjct: 404 EEGGCEEEEDDHMEFCRVCK---------DGGELLCCDACPSSYHLHCLNP----PLPEI 450

Query: 623 PKDKWFCCD-DCNRIHAALQDFVSNRAQTIPASSLSTINRKHIEKGILFDGTMND----- 676
           P  +W C    C  +   +Q  +  R    PA  +  +    +E  +     +       
Sbjct: 451 PNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVEPSLPPPKPLEGIPERE 510

Query: 677 --VQWQMLKKAQCFEEKEKSLLSSATAIFR 704
             V+W  L    C   KE  L    T ++R
Sbjct: 511 FFVKWAGLSYWHCSWVKELQLELYHTVMYR 540




May play a role in the development of the nervous system and the pathogenesis of neural tumors.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 6EC: .EC: 4EC: .EC: 1EC: 2
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4 PE=1 SV=2 Back     alignment and function description
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4 PE=1 SV=1 Back     alignment and function description
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3 PE=1 SV=3 Back     alignment and function description
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2 Back     alignment and function description
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2 Back     alignment and function description
>sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=Homo sapiens GN=MLL2 PE=1 SV=2 Back     alignment and function description
>sp|Q9Z0E3|AIRE_MOUSE Autoimmune regulator OS=Mus musculus GN=Aire PE=1 SV=1 Back     alignment and function description
>sp|O43918|AIRE_HUMAN Autoimmune regulator OS=Homo sapiens GN=AIRE PE=1 SV=1 Back     alignment and function description
>sp|Q6PDK2|MLL2_MOUSE Histone-lysine N-methyltransferase MLL2 OS=Mus musculus GN=Mll2 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query805
255581042856 DNA binding protein, putative [Ricinus c 0.970 0.912 0.605 0.0
297741475841 unnamed protein product [Vitis vinifera] 0.957 0.916 0.582 0.0
225439735896 PREDICTED: uncharacterized protein LOC10 0.967 0.869 0.569 0.0
38230506868 predicted protein [Populus tremula x Pop 0.939 0.870 0.605 0.0
356548148852 PREDICTED: uncharacterized protein LOC10 0.946 0.894 0.571 0.0
356536874855 PREDICTED: uncharacterized protein LOC10 0.946 0.891 0.570 0.0
449440345842 PREDICTED: uncharacterized protein LOC10 0.937 0.896 0.562 0.0
358346906897 Chromodomain-helicase-DNA-binding protei 0.982 0.881 0.558 0.0
297827261862 PHD finger family protein [Arabidopsis l 0.937 0.875 0.536 0.0
334184778829 acyl-CoA N-acyltransferase with RING/FYV 0.927 0.901 0.539 0.0
>gi|255581042|ref|XP_002531337.1| DNA binding protein, putative [Ricinus communis] gi|223529059|gb|EEF31044.1| DNA binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  929 bits (2401), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/827 (60%), Positives = 594/827 (71%), Gaps = 46/827 (5%)

Query: 1   MGESAVCLEVPADGEMDVECSSRTESKQDRELLTDN-VESDSFPNGKHAKEEALNDDIKS 59
           MGE+AVC+++  + + +   +S TE K+D + L DN  E++SFPN K AKE   N+DIKS
Sbjct: 1   MGEAAVCVDITTENDNN---TSGTELKRDHQFLIDNDTETESFPNKKQAKES--NEDIKS 55

Query: 60  EVSNPVVSPKEFTSS------LQDITSQETKLVTESCNQVLSTTSTGNLSSEETLSDGDE 113
           EVSNP++SPKE  ++        DITSQ T+       ++ +    G +  E T +    
Sbjct: 56  EVSNPIISPKENNNNNASSSSWHDITSQPTE-------ELATANQLGGVGGEVTSTISGN 108

Query: 114 RTESSYAETSRTDNNS----GD---VSKSHVVLEIPKHVSSSSGIRKITFKFSKRKEDYV 166
              SS  E S  +NN+    GD   VS SHVVLEIPKH +S++GIRKITFKFSKRKEDY 
Sbjct: 109 SCPSS--EHSSENNNASICNGDCDSVSTSHVVLEIPKH-ASTTGIRKITFKFSKRKEDYD 165

Query: 167 APLAYE----EGRNYTLYD---DLGSSGANDGVLCARNMEIKMSKKVVPNEYPTNVKKLL 219
             L  E      R ++  D   ++  +G  D   CA NME+KMSKKV+PN +P+NVKKLL
Sbjct: 166 TRLNQELSPSRSREFSWVDSGTEMPETG--DRYFCAPNMELKMSKKVLPNTFPSNVKKLL 223

Query: 220 STGILDGACVKYISTSRERQLDGIVNGGGYLCGCPLCNFSKVVSAHEFEQHAGAKTRHPN 279
           STGILDGA VKYIS  RE  L GI++GGGYLCGCP CNFS+V++A+EFE HAGAKTRHPN
Sbjct: 224 STGILDGARVKYISPQRE--LYGIIDGGGYLCGCPSCNFSRVLTAYEFELHAGAKTRHPN 281

Query: 280 NHIYLENGKPIYSIIQELKTAPLGILEEVVKKVAGSSFNEGSFRVWKASHHLRKGLVEHD 339
           NHIYLENGKPI SIIQELK APLG ++EV+K  AGSS NE  F+VWKAS H   G++  D
Sbjct: 282 NHIYLENGKPICSIIQELKAAPLGAVDEVIKDAAGSSINEEFFQVWKASLHQCNGIIGAD 341

Query: 340 EKHNMKLPSLPHSIISCSSLALEESISPTSCSFVQDTGREQTHMKEMLEERKRGVKRP-- 397
           EK    LP  PHS+ S SS  LEES  P   SFV      +    +  EE KR  +RP  
Sbjct: 342 EKCYSMLPYSPHSLGSYSSQGLEESGCPPCSSFVHSNPFRRQKYMDSSEEHKRAFRRPSS 401

Query: 398 FMHQKRTAEGGTKKRDNDLHRLLFLPNGLPDGERLTYIVKGQRLRFGCKQGNGIVCDCCN 457
             H K+T EGGT++RDNDLHRLLF+PNGLPDG  L Y +KGQ++  G KQGNGIVC CC+
Sbjct: 402 LSHPKKTNEGGTRRRDNDLHRLLFMPNGLPDGAELAYYIKGQKMLAGYKQGNGIVCSCCD 461

Query: 458 KEISPSQFEAHAGMAARRQPYRHIYTSNGMTLHDIAISLAMGQRRTTGGSDDMCHVCGDG 517
           +EISPSQFEAHAGMAARRQPYRHIYTSNG+TLHDIA SLA GQ  TTG SDDMC  CGDG
Sbjct: 462 REISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIATSLANGQNLTTGLSDDMCAECGDG 521

Query: 518 ENLLLCNGCPLAFHAACLDPLLIPESGWRCPNCRQ-GHSSSMSRS--VDLKGGLEAPGAE 574
            +L+ C  CP AFH  CL    +P   W CPNC + GH  + SRS  + L   ++ P  E
Sbjct: 522 GDLIFCESCPRAFHLVCLGLKYVPSDVWHCPNCNKFGHGGNFSRSIVIRLTRVVKTPEYE 581

Query: 575 VGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCN 634
           VGGCV CR+HDFS  TF+DRTVI CDQCE+EFHVGCLR NGLCDLKEIPKD WFC +DCN
Sbjct: 582 VGGCVFCRAHDFSTHTFNDRTVILCDQCEREFHVGCLRDNGLCDLKEIPKDNWFCSNDCN 641

Query: 635 RIHAALQDFVSNRAQTIPASSLSTINRKHIEKGILFDGTMNDVQWQMLKKAQCFEEKEKS 694
           RI+ ALQ+FVS+  Q IP+  L+ I  KH EKG+  DG  ND QW++L     ++E + S
Sbjct: 642 RIYEALQNFVSSGVQMIPSLQLNIITGKHAEKGLYIDGQANDFQWRILMGKSRYQE-DLS 700

Query: 695 LLSSATAIFRECFDPIIAECGRDLIPVMVYGRNISGQEFGGMYSVILTVKSVVVSAGLLR 754
           LLS+A AIFRECFDPI+A+ GRDLIPVMVYGRNISGQEFGGMY V+L VK+VVVSAGLLR
Sbjct: 701 LLSAAAAIFRECFDPIVAKSGRDLIPVMVYGRNISGQEFGGMYCVLLLVKNVVVSAGLLR 760

Query: 755 IFGREVAELPLVATCREYQGKGCFQALFSCIERLLCSLNVENLVLPA 801
           IFGR+VAELPLVAT RE+QGKG FQALFSCIERLLCSLNV  LVLPA
Sbjct: 761 IFGRDVAELPLVATSREHQGKGYFQALFSCIERLLCSLNVVKLVLPA 807




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741475|emb|CBI32607.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225439735|ref|XP_002273013.1| PREDICTED: uncharacterized protein LOC100246491 [Vitis vinifera] Back     alignment and taxonomy information
>gi|38230506|gb|AAR14274.1| predicted protein [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|356548148|ref|XP_003542465.1| PREDICTED: uncharacterized protein LOC100808999 [Glycine max] Back     alignment and taxonomy information
>gi|356536874|ref|XP_003536958.1| PREDICTED: uncharacterized protein LOC100794242 [Glycine max] Back     alignment and taxonomy information
>gi|449440345|ref|XP_004137945.1| PREDICTED: uncharacterized protein LOC101207817 [Cucumis sativus] Back     alignment and taxonomy information
>gi|358346906|ref|XP_003637505.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|355503440|gb|AES84643.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|297827261|ref|XP_002881513.1| PHD finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297327352|gb|EFH57772.1| PHD finger family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|334184778|ref|NP_181288.4| acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Arabidopsis thaliana] gi|330254317|gb|AEC09411.1| acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query805
TAIR|locus:20405501007 AT2G36720 "AT2G36720" [Arabido 0.281 0.225 0.5 1.3e-110
TAIR|locus:2168088425 AT5G59830 "AT5G59830" [Arabido 0.170 0.322 0.543 3.9e-42
TAIR|locus:2173179537 AT5G13660 "AT5G13660" [Arabido 0.306 0.459 0.378 2.1e-38
TAIR|locus:2201021 1138 AT1G05380 "AT1G05380" [Arabido 0.124 0.087 0.407 1.3e-32
TAIR|locus:2086395 1189 ROS4 "AT3G14980" [Arabidopsis 0.293 0.198 0.291 2e-31
TAIR|locus:2147391 1179 AT5G36740 [Arabidopsis thalian 0.124 0.084 0.389 1.2e-22
TAIR|locus:2832118 1193 AT5G36670 [Arabidopsis thalian 0.124 0.083 0.389 1.2e-18
UNIPROTKB|F1SSZ2 1667 CHD5 "Uncharacterized protein" 0.228 0.110 0.282 9.8e-11
UNIPROTKB|E2R1M3 1812 CHD5 "Uncharacterized protein" 0.228 0.101 0.282 1.1e-10
ZFIN|ZDB-GENE-041111-187 1930 chd4a "chromodomain helicase D 0.162 0.067 0.324 1.2e-10
TAIR|locus:2040550 AT2G36720 "AT2G36720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 589 (212.4 bits), Expect = 1.3e-110, Sum P(3) = 1.3e-110
 Identities = 115/230 (50%), Positives = 155/230 (67%)

Query:   573 AEVGGCVICRSHDFSAATFDDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDD 632
             AE  GCV+C   DF  + F  RT+I CDQCEKE+H+GCL    + DLKE+PK  WFC  D
Sbjct:   701 AETNGCVLCSGSDFCRSGFGPRTIIICDQCEKEYHIGCLSSQNIVDLKELPKGNWFCSMD 760

Query:   633 CNRIHAALQDFVSNRAQTIPASSLSTINRKHIEKGILFDGTMNDVQWQMLKKAQCFEEKE 692
             C RI++ LQ  +   A+ +  SSL  I  K  E+  ++  +  D++W+++   +    + 
Sbjct:   761 CTRINSTLQKLLLGGAEKLSDSSLGIIQTKQ-ERNDVYSISDLDIRWRLIS-GKVTSPES 818

Query:   693 KSLLSSATAIFRECFDPIIAEC-GRDLIPVMVYGRNISGQEFGGMYSVILTVKSVVVSAG 751
             + LLS A AIF +CFDPI+    G +LIP MVYG+ + GQ++GG+   +LTV + VVSAG
Sbjct:   819 RMLLSQALAIFHDCFDPIVDPLSGSNLIPRMVYGKTMQGQDYGGICCAVLTVNATVVSAG 878

Query:   752 LLRIFGREVAELPLVATCREYQGKGCFQALFSCIERLLCSLNVENLVLPA 801
             LLR+FGREVAELPLVAT    + KG FQ LFSCIE+LL SLNVE++V+PA
Sbjct:   879 LLRVFGREVAELPLVATRMCSREKGYFQLLFSCIEKLLSSLNVESIVVPA 928


GO:0003677 "DNA binding" evidence=ISS
GO:0005634 "nucleus" evidence=ISM;ISS
GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS
GO:0008270 "zinc ion binding" evidence=IEA
GO:0009630 "gravitropism" evidence=RCA
TAIR|locus:2168088 AT5G59830 "AT5G59830" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2173179 AT5G13660 "AT5G13660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201021 AT1G05380 "AT1G05380" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086395 ROS4 "AT3G14980" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2147391 AT5G36740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2832118 AT5G36670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1SSZ2 CHD5 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2R1M3 CHD5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041111-187 chd4a "chromodomain helicase DNA binding protein 4a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.6.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query805
pfam0062851 pfam00628, PHD, PHD-finger 2e-08
smart0024947 smart00249, PHD, PHD zinc finger 1e-07
pfam0062851 pfam00628, PHD, PHD-finger 3e-04
smart0024947 smart00249, PHD, PHD zinc finger 4e-04
COG5141 669 COG5141, COG5141, PHD zinc finger-containing prote 0.003
>gnl|CDD|201356 pfam00628, PHD, PHD-finger Back     alignment and domain information
 Score = 51.0 bits (122), Expect = 2e-08
 Identities = 25/48 (52%), Positives = 27/48 (56%), Gaps = 7/48 (14%)

Query: 511 CHVCG---DGENLLLCNGCPLAFHAACLDPLL----IPESGWRCPNCR 551
           C VCG   D   LLLC+GC   FH ACL P L    IPE  W CP C+
Sbjct: 2   CAVCGKVDDDGELLLCDGCDRWFHLACLGPPLEPEEIPEGEWYCPECK 49


PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner to that of the RING and FYVE domains. Several PHD fingers have been identified as binding modules of methylated histone H3. Length = 51

>gnl|CDD|214584 smart00249, PHD, PHD zinc finger Back     alignment and domain information
>gnl|CDD|201356 pfam00628, PHD, PHD-finger Back     alignment and domain information
>gnl|CDD|214584 smart00249, PHD, PHD zinc finger Back     alignment and domain information
>gnl|CDD|227470 COG5141, COG5141, PHD zinc finger-containing protein [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 805
KOG1244336 consensus Predicted transcription factor Requiem/N 99.1
KOG0956 900 consensus PHD finger protein AF10 [General functio 99.04
KOG1512381 consensus PHD Zn-finger protein [General function 98.95
COG5141 669 PHD zinc finger-containing protein [General functi 98.49
COG1246153 ArgA N-acetylglutamate synthase and related acetyl 98.45
KOG4443 694 consensus Putative transcription factor HALR/MLL3, 98.4
KOG0955 1051 consensus PHD finger protein BR140/LIN-49 [General 98.39
PF0058383 Acetyltransf_1: Acetyltransferase (GNAT) family; I 98.38
KOG4299 613 consensus PHD Zn-finger protein [General function 98.25
PF15446175 zf-PHD-like: PHD/FYVE-zinc-finger like domain 98.24
KOG0954 893 consensus PHD finger protein [General function pre 98.21
PF13673117 Acetyltransf_10: Acetyltransferase (GNAT) domain; 98.14
smart0025873 SAND SAND domain. 98.04
PF1350879 Acetyltransf_7: Acetyltransferase (GNAT) domain; P 98.03
KOG4299613 consensus PHD Zn-finger protein [General function 97.97
KOG4323464 consensus Polycomb-like PHD Zn-finger protein [Gen 97.96
KOG0383 696 consensus Predicted helicase [General function pre 97.94
cd0430165 NAT_SF N-Acyltransferase superfamily: Various enzy 97.93
PRK07922169 N-acetylglutamate synthase; Validated 97.89
PF0062851 PHD: PHD-finger; InterPro: IPR019787 Zinc finger ( 97.89
KOG1244336 consensus Predicted transcription factor Requiem/N 97.88
PRK07757152 acetyltransferase; Provisional 97.86
PLN02706150 glucosamine 6-phosphate N-acetyltransferase 97.86
PRK10146144 aminoalkylphosphonic acid N-acetyltransferase; Pro 97.85
KOG1512381 consensus PHD Zn-finger protein [General function 97.85
PRK03624140 putative acetyltransferase; Provisional 97.83
KOG4443 694 consensus Putative transcription factor HALR/MLL3, 97.79
smart0024947 PHD PHD zinc finger. The plant homeodomain (PHD) f 97.77
PHA00673154 acetyltransferase domain containing protein 97.74
KOG1473 1414 consensus Nucleosome remodeling factor, subunit NU 97.73
KOG0825 1134 consensus PHD Zn-finger protein [General function 97.69
PF0062851 PHD: PHD-finger; InterPro: IPR019787 Zinc finger ( 97.69
PTZ00330147 acetyltransferase; Provisional 97.68
PF13527127 Acetyltransf_9: Acetyltransferase (GNAT) domain; P 97.68
PLN02825515 amino-acid N-acetyltransferase 97.67
TIGR03827266 GNAT_ablB putative beta-lysine N-acetyltransferase 97.66
smart0024947 PHD PHD zinc finger. The plant homeodomain (PHD) f 97.63
PRK10975194 TDP-fucosamine acetyltransferase; Provisional 97.63
PRK10314153 putative acyltransferase; Provisional 97.63
PHA01807153 hypothetical protein 97.6
PF0134282 SAND: SAND domain; InterPro: IPR000770 The SAND do 97.58
TIGR02382191 wecD_rffC TDP-D-fucosamine acetyltransferase. This 97.53
TIGR01575131 rimI ribosomal-protein-alanine acetyltransferase. 97.53
PRK09491146 rimI ribosomal-protein-alanine N-acetyltransferase 97.46
KOG0383 696 consensus Predicted helicase [General function pre 97.44
TIGR00124 332 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP 97.43
TIGR01890429 N-Ac-Glu-synth amino-acid N-acetyltransferase. Thi 97.4
PRK12308614 bifunctional argininosuccinate lyase/N-acetylgluta 97.38
cd02169 297 Citrate_lyase_ligase Citrate lyase ligase. Citrate 97.36
PRK10140162 putative acetyltransferase YhhY; Provisional 97.28
COG5034271 TNG2 Chromatin remodeling protein, contains PhD zi 97.25
KOG1973274 consensus Chromatin remodeling protein, contains P 97.14
PRK05279441 N-acetylglutamate synthase; Validated 97.12
TIGR02406157 ectoine_EctA L-2,4-diaminobutyric acid acetyltrans 97.11
TIGR03448292 mycothiol_MshD mycothiol biosynthesis acetyltransf 97.09
KOG1973274 consensus Chromatin remodeling protein, contains P 97.06
KOG0825 1134 consensus PHD Zn-finger protein [General function 96.95
PRK01346 411 hypothetical protein; Provisional 96.82
COG5034271 TNG2 Chromatin remodeling protein, contains PhD zi 96.76
TIGR03448 292 mycothiol_MshD mycothiol biosynthesis acetyltransf 96.71
PRK09831147 putative acyltransferase; Provisional 96.53
COG0456177 RimI Acetyltransferases [General function predicti 96.5
PF13420155 Acetyltransf_4: Acetyltransferase (GNAT) domain; P 96.46
PRK15130186 spermidine N1-acetyltransferase; Provisional 96.42
TIGR03103 547 trio_acet_GNAT GNAT-family acetyltransferase TIGR0 96.4
KOG0957707 consensus PHD finger protein [General function pre 96.38
PF13302142 Acetyltransf_3: Acetyltransferase (GNAT) domain; P 96.34
PF1383136 PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A. 96.32
PRK13688156 hypothetical protein; Provisional 96.3
TIGR01686320 FkbH FkbH-like domain. The C-terminal portion of t 96.26
PF13523152 Acetyltransf_8: Acetyltransferase (GNAT) domain; P 96.24
KOG3139165 consensus N-acetyltransferase [General function pr 96.15
PF0844586 FR47: FR47-like protein; InterPro: IPR013653 Prote 95.93
TIGR03585156 PseH pseudaminic acid biosynthesis N-acetyl transf 95.87
cd04718148 BAH_plant_2 BAH, or Bromo Adjacent Homology domain 95.86
PRK10809194 ribosomal-protein-S5-alanine N-acetyltransferase; 95.83
COG3393268 Predicted acetyltransferase [General function pred 95.69
KOG0957 707 consensus PHD finger protein [General function pre 95.61
KOG12451404 consensus Chromatin remodeling complex WSTF-ISWI, 95.59
PRK10562145 putative acetyltransferase; Provisional 95.52
KOG0956 900 consensus PHD finger protein AF10 [General functio 95.49
PRK10514145 putative acetyltransferase; Provisional 95.46
KOG0955 1051 consensus PHD finger protein BR140/LIN-49 [General 95.41
KOG3396150 consensus Glucosamine-phosphate N-acetyltransferas 95.4
COG3153171 Predicted acetyltransferase [General function pred 95.37
PRK10151179 ribosomal-protein-L7/L12-serine acetyltransferase; 95.18
cd04718148 BAH_plant_2 BAH, or Bromo Adjacent Homology domain 95.18
COG2153155 ElaA Predicted acyltransferase [General function p 94.52
PF0844489 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acylt 94.51
smart0025873 SAND SAND domain. 94.13
COG1247169 Sortase and related acyltransferases [Cell envelop 93.86
KOG4323464 consensus Polycomb-like PHD Zn-finger protein [Gen 93.79
KOG3216163 consensus Diamine acetyltransferase [Amino acid tr 93.61
COG5141 669 PHD zinc finger-containing protein [General functi 93.58
KOG12451404 consensus Chromatin remodeling complex WSTF-ISWI, 93.56
TIGR01211522 ELP3 histone acetyltransferase, ELP3 family. The S 93.56
PF12746265 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S 93.44
KOG0954 893 consensus PHD finger protein [General function pre 93.36
PF1454278 Acetyltransf_CG: GCN5-related N-acetyl-transferase 92.44
KOG2488202 consensus Acetyltransferase (GNAT) domain-containi 92.32
PF13832110 zf-HC5HC2H_2: PHD-zinc-finger like domain 92.3
PF0134282 SAND: SAND domain; InterPro: IPR000770 The SAND do 91.71
COG0454156 WecD Histone acetyltransferase HPA2 and related ac 91.66
COG238899 Predicted acetyltransferase [General function pred 90.69
PF12568128 DUF3749: Acetyltransferase (GNAT) domain; InterPro 90.5
PF1383136 PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A. 90.45
COG1670187 RimL Acetyltransferases, including N-acetylases of 90.18
PF13480142 Acetyltransf_6: Acetyltransferase (GNAT) domain 89.4
KOG3397225 consensus Acetyltransferases [General function pre 88.4
COG4552 389 Eis Predicted acetyltransferase involved in intrac 82.54
>KOG1244 consensus Predicted transcription factor Requiem/NEURO-D4 [Transcription] Back     alignment and domain information
Probab=99.10  E-value=1.8e-11  Score=127.82  Aligned_cols=83  Identities=30%  Similarity=0.876  Sum_probs=72.7

Q ss_pred             CCceeecCCCCCcccccccCC-----CCCCCCCccccccCcCCcCCcccccccCCCCCCCCcccccCccccCCCCCCccc
Q 003662          517 GENLLLCNGCPLAFHAACLDP-----LLIPESGWRCPNCRQGHSSSMSRSVDLKGGLEAPGAEVGGCVICRSHDFSAATF  591 (805)
Q Consensus       517 gG~LL~Cd~Cp~afH~~CL~~-----~~vP~g~W~C~~C~~~~~~~~s~pirl~r~~~~~~~e~~~C~vC~~~d~s~~~~  591 (805)
                      .++|+.|..|.++-|..||..     ..+....|+|..|+.                         |.||+-.+      
T Consensus       243 peelvscsdcgrsghpsclqft~nm~~avk~yrwqcieck~-------------------------csicgtse------  291 (336)
T KOG1244|consen  243 PEELVSCSDCGRSGHPSCLQFTANMIAAVKTYRWQCIECKY-------------------------CSICGTSE------  291 (336)
T ss_pred             chhhcchhhcCCCCCcchhhhhHHHHHHHHhheeeeeecce-------------------------eccccCcC------
Confidence            468999999999999999996     345678999999986                         99999765      


Q ss_pred             CCCCeeccCCCCCccCcccCCCCCCCCcccCCCCCcEEcCCchh
Q 003662          592 DDRTVIYCDQCEKEFHVGCLRKNGLCDLKEIPKDKWFCCDDCNR  635 (805)
Q Consensus       592 ~~~~LL~CdqCer~yHv~CL~p~g~~~L~eiP~g~WFCc~~C~~  635 (805)
                      +++.+|+||-|+|.||++||.|    +|.+.|+|.|-| .-|-+
T Consensus       292 nddqllfcddcdrgyhmyclsp----pm~eppegswsc-~KOG~  330 (336)
T KOG1244|consen  292 NDDQLLFCDDCDRGYHMYCLSP----PMVEPPEGSWSC-HLCLE  330 (336)
T ss_pred             CCceeEeecccCCceeeEecCC----CcCCCCCCchhH-HHHHH
Confidence            5789999999999999999999    889999999999 66643



>KOG0956 consensus PHD finger protein AF10 [General function prediction only] Back     alignment and domain information
>KOG1512 consensus PHD Zn-finger protein [General function prediction only] Back     alignment and domain information
>COG5141 PHD zinc finger-containing protein [General function prediction only] Back     alignment and domain information
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4443 consensus Putative transcription factor HALR/MLL3, involved in embryonic development [General function prediction only] Back     alignment and domain information
>KOG0955 consensus PHD finger protein BR140/LIN-49 [General function prediction only] Back     alignment and domain information
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2 Back     alignment and domain information
>KOG4299 consensus PHD Zn-finger protein [General function prediction only] Back     alignment and domain information
>PF15446 zf-PHD-like: PHD/FYVE-zinc-finger like domain Back     alignment and domain information
>KOG0954 consensus PHD finger protein [General function prediction only] Back     alignment and domain information
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A Back     alignment and domain information
>smart00258 SAND SAND domain Back     alignment and domain information
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A Back     alignment and domain information
>KOG4299 consensus PHD Zn-finger protein [General function prediction only] Back     alignment and domain information
>KOG4323 consensus Polycomb-like PHD Zn-finger protein [General function prediction only] Back     alignment and domain information
>KOG0383 consensus Predicted helicase [General function prediction only] Back     alignment and domain information
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate Back     alignment and domain information
>PRK07922 N-acetylglutamate synthase; Validated Back     alignment and domain information
>PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>KOG1244 consensus Predicted transcription factor Requiem/NEURO-D4 [Transcription] Back     alignment and domain information
>PRK07757 acetyltransferase; Provisional Back     alignment and domain information
>PLN02706 glucosamine 6-phosphate N-acetyltransferase Back     alignment and domain information
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional Back     alignment and domain information
>KOG1512 consensus PHD Zn-finger protein [General function prediction only] Back     alignment and domain information
>PRK03624 putative acetyltransferase; Provisional Back     alignment and domain information
>KOG4443 consensus Putative transcription factor HALR/MLL3, involved in embryonic development [General function prediction only] Back     alignment and domain information
>smart00249 PHD PHD zinc finger Back     alignment and domain information
>PHA00673 acetyltransferase domain containing protein Back     alignment and domain information
>KOG1473 consensus Nucleosome remodeling factor, subunit NURF301/BPTF [Chromatin structure and dynamics; Transcription] Back     alignment and domain information
>KOG0825 consensus PHD Zn-finger protein [General function prediction only] Back     alignment and domain information
>PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>PTZ00330 acetyltransferase; Provisional Back     alignment and domain information
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B Back     alignment and domain information
>PLN02825 amino-acid N-acetyltransferase Back     alignment and domain information
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase Back     alignment and domain information
>smart00249 PHD PHD zinc finger Back     alignment and domain information
>PRK10975 TDP-fucosamine acetyltransferase; Provisional Back     alignment and domain information
>PRK10314 putative acyltransferase; Provisional Back     alignment and domain information
>PHA01807 hypothetical protein Back     alignment and domain information
>PF01342 SAND: SAND domain; InterPro: IPR000770 The SAND domain (named after Sp100, AIRE-1, NucP41/75, DEAF-1) is a conserved ~80 residue region found in a number of nuclear proteins, many of which function in chromatin-dependent transcriptional control Back     alignment and domain information
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase Back     alignment and domain information
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase Back     alignment and domain information
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional Back     alignment and domain information
>KOG0383 consensus Predicted helicase [General function prediction only] Back     alignment and domain information
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase Back     alignment and domain information
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase Back     alignment and domain information
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional Back     alignment and domain information
>cd02169 Citrate_lyase_ligase Citrate lyase ligase Back     alignment and domain information
>PRK10140 putative acetyltransferase YhhY; Provisional Back     alignment and domain information
>COG5034 TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] Back     alignment and domain information
>KOG1973 consensus Chromatin remodeling protein, contains PHD Zn-finger [Chromatin structure and dynamics] Back     alignment and domain information
>PRK05279 N-acetylglutamate synthase; Validated Back     alignment and domain information
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase Back     alignment and domain information
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase Back     alignment and domain information
>KOG1973 consensus Chromatin remodeling protein, contains PHD Zn-finger [Chromatin structure and dynamics] Back     alignment and domain information
>KOG0825 consensus PHD Zn-finger protein [General function prediction only] Back     alignment and domain information
>PRK01346 hypothetical protein; Provisional Back     alignment and domain information
>COG5034 TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] Back     alignment and domain information
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase Back     alignment and domain information
>PRK09831 putative acyltransferase; Provisional Back     alignment and domain information
>COG0456 RimI Acetyltransferases [General function prediction only] Back     alignment and domain information
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A Back     alignment and domain information
>PRK15130 spermidine N1-acetyltransferase; Provisional Back     alignment and domain information
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103 Back     alignment and domain information
>KOG0957 consensus PHD finger protein [General function prediction only] Back     alignment and domain information
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A Back     alignment and domain information
>PF13831 PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A Back     alignment and domain information
>PRK13688 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01686 FkbH FkbH-like domain Back     alignment and domain information
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A Back     alignment and domain information
>KOG3139 consensus N-acetyltransferase [General function prediction only] Back     alignment and domain information
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT) Back     alignment and domain information
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase Back     alignment and domain information
>cd04718 BAH_plant_2 BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function Back     alignment and domain information
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional Back     alignment and domain information
>COG3393 Predicted acetyltransferase [General function prediction only] Back     alignment and domain information
>KOG0957 consensus PHD finger protein [General function prediction only] Back     alignment and domain information
>KOG1245 consensus Chromatin remodeling complex WSTF-ISWI, large subunit (contains heterochromatin localization, PHD and BROMO domains) [Chromatin structure and dynamics] Back     alignment and domain information
>PRK10562 putative acetyltransferase; Provisional Back     alignment and domain information
>KOG0956 consensus PHD finger protein AF10 [General function prediction only] Back     alignment and domain information
>PRK10514 putative acetyltransferase; Provisional Back     alignment and domain information
>KOG0955 consensus PHD finger protein BR140/LIN-49 [General function prediction only] Back     alignment and domain information
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>COG3153 Predicted acetyltransferase [General function prediction only] Back     alignment and domain information
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional Back     alignment and domain information
>cd04718 BAH_plant_2 BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function Back     alignment and domain information
>COG2153 ElaA Predicted acyltransferase [General function prediction only] Back     alignment and domain information
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2 Back     alignment and domain information
>smart00258 SAND SAND domain Back     alignment and domain information
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG4323 consensus Polycomb-like PHD Zn-finger protein [General function prediction only] Back     alignment and domain information
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism] Back     alignment and domain information
>COG5141 PHD zinc finger-containing protein [General function prediction only] Back     alignment and domain information
>KOG1245 consensus Chromatin remodeling complex WSTF-ISWI, large subunit (contains heterochromatin localization, PHD and BROMO domains) [Chromatin structure and dynamics] Back     alignment and domain information
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family Back     alignment and domain information
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B Back     alignment and domain information
>KOG0954 consensus PHD finger protein [General function prediction only] Back     alignment and domain information
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A Back     alignment and domain information
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only] Back     alignment and domain information
>PF13832 zf-HC5HC2H_2: PHD-zinc-finger like domain Back     alignment and domain information
>PF01342 SAND: SAND domain; InterPro: IPR000770 The SAND domain (named after Sp100, AIRE-1, NucP41/75, DEAF-1) is a conserved ~80 residue region found in a number of nuclear proteins, many of which function in chromatin-dependent transcriptional control Back     alignment and domain information
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only] Back     alignment and domain information
>COG2388 Predicted acetyltransferase [General function prediction only] Back     alignment and domain information
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length Back     alignment and domain information
>PF13831 PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A Back     alignment and domain information
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain Back     alignment and domain information
>KOG3397 consensus Acetyltransferases [General function prediction only] Back     alignment and domain information
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query805
1xwh_A66 Nmr Structure Of The First Phd Finger Of Autoimmune 8e-08
2kft_A56 Nmr Solution Structure Of The First Phd Finger Doma 2e-07
2l5u_A61 Structure Of The First Phd Finger (Phd1) From Chd4 4e-06
3ask_A226 Structure Of Uhrf1 In Complex With Histone Tail Len 8e-06
4gy5_A241 Crystal Structure Of The Tandem Tudor Domain And Pl 2e-05
2ysm_A111 Solution Structure Of The First And Second Phd Doma 7e-05
2ysm_A111 Solution Structure Of The First And Second Phd Doma 7e-04
1mm3_A61 Solution Structure Of The 2nd Phd Domain From Mi2b 1e-04
2yql_A56 Solution Structure Of The Phd Domain In Phd Finger 2e-04
3u5m_A207 Crystal Structure Of Trim33 Phd-Bromo In The Free S 2e-04
1mm2_A61 Solution Structure Of The 2nd Phd Domain From Mi2b 3e-04
2puy_A60 Crystal Structure Of The Bhc80 Phd Finger Length = 3e-04
3zvz_B57 Phd Finger Of Human Uhrf1 Length = 57 4e-04
3zvy_A72 Phd Finger Of Human Uhrf1 In Complex With Unmodifie 4e-04
3sou_A70 Structure Of Uhrf1 Phd Finger In Complex With Histo 6e-04
2lgg_A69 Structure Of Phd Domain Of Uhrf1 In Complex With H3 6e-04
1f62_A51 Wstf-Phd Length = 51 6e-04
3t6r_A72 Structure Of Uhrf1 In Complex With Unmodified H3 N- 6e-04
3shb_A77 Crystal Structure Of Phd Domain Of Uhrf1 Length = 7 7e-04
>pdb|1XWH|A Chain A, Nmr Structure Of The First Phd Finger Of Autoimmune Regulator Protein (Aire1): Insights Into Apeced Length = 66 Back     alignment and structure

Iteration: 1

Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 7/59 (11%) Query: 497 AMGQRRTTGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCRQG 553 AM Q+ ++D C VC DG L+ C+GCP AFH ACL P L IP WRC +C Q Sbjct: 2 AMAQK-----NEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQA 55
>pdb|2KFT|A Chain A, Nmr Solution Structure Of The First Phd Finger Domain Of Human Autoimmune Regulator (Aire) In Complex With Histone H3(1-20cys) Peptide Length = 56 Back     alignment and structure
>pdb|2L5U|A Chain A, Structure Of The First Phd Finger (Phd1) From Chd4 (Mi2b) Length = 61 Back     alignment and structure
>pdb|3ASK|A Chain A, Structure Of Uhrf1 In Complex With Histone Tail Length = 226 Back     alignment and structure
>pdb|4GY5|A Chain A, Crystal Structure Of The Tandem Tudor Domain And Plant Homeodomain Of Uhrf1 With Histone H3k9me3 Length = 241 Back     alignment and structure
>pdb|2YSM|A Chain A, Solution Structure Of The First And Second Phd Domain From MyeloidLYMPHOID OR MIXED-Lineage Leukemia Protein 3 Homolog Length = 111 Back     alignment and structure
>pdb|2YSM|A Chain A, Solution Structure Of The First And Second Phd Domain From MyeloidLYMPHOID OR MIXED-Lineage Leukemia Protein 3 Homolog Length = 111 Back     alignment and structure
>pdb|1MM3|A Chain A, Solution Structure Of The 2nd Phd Domain From Mi2b With C- Terminal Loop Replaced By Corresponding Loop From Wstf Length = 61 Back     alignment and structure
>pdb|2YQL|A Chain A, Solution Structure Of The Phd Domain In Phd Finger Protein 21a Length = 56 Back     alignment and structure
>pdb|3U5M|A Chain A, Crystal Structure Of Trim33 Phd-Bromo In The Free State Length = 207 Back     alignment and structure
>pdb|1MM2|A Chain A, Solution Structure Of The 2nd Phd Domain From Mi2b Length = 61 Back     alignment and structure
>pdb|2PUY|A Chain A, Crystal Structure Of The Bhc80 Phd Finger Length = 60 Back     alignment and structure
>pdb|3ZVZ|B Chain B, Phd Finger Of Human Uhrf1 Length = 57 Back     alignment and structure
>pdb|3ZVY|A Chain A, Phd Finger Of Human Uhrf1 In Complex With Unmodified Histone H3 N-Terminal Tail Length = 72 Back     alignment and structure
>pdb|3SOU|A Chain A, Structure Of Uhrf1 Phd Finger In Complex With Histone H3 1-9 Peptide Length = 70 Back     alignment and structure
>pdb|2LGG|A Chain A, Structure Of Phd Domain Of Uhrf1 In Complex With H3 Peptide Length = 69 Back     alignment and structure
>pdb|1F62|A Chain A, Wstf-Phd Length = 51 Back     alignment and structure
>pdb|3T6R|A Chain A, Structure Of Uhrf1 In Complex With Unmodified H3 N-Terminal Tail Length = 72 Back     alignment and structure
>pdb|3SHB|A Chain A, Crystal Structure Of Phd Domain Of Uhrf1 Length = 77 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query805
3ql9_A129 Transcriptional regulator ATRX; zinc finger, trans 1e-18
3ql9_A129 Transcriptional regulator ATRX; zinc finger, trans 2e-05
2lbm_A142 Transcriptional regulator ATRX; metal binding prot 6e-18
2lbm_A142 Transcriptional regulator ATRX; metal binding prot 8e-05
2ysm_A111 Myeloid/lymphoid or mixed-lineage leukemia protein 2e-17
2l5u_A61 Chromodomain-helicase-DNA-binding protein 4; CHD4, 8e-16
2l5u_A61 Chromodomain-helicase-DNA-binding protein 4; CHD4, 1e-04
2yql_A56 PHD finger protein 21A; PHD domain, structural gen 8e-16
2yql_A56 PHD finger protein 21A; PHD domain, structural gen 1e-04
1xwh_A66 Autoimmune regulator; PHD domain, Zn binding domai 2e-15
1xwh_A66 Autoimmune regulator; PHD domain, Zn binding domai 7e-04
1mm2_A61 MI2-beta; PHD, zinc finger, protein scaffold, DNA 2e-15
1mm2_A61 MI2-beta; PHD, zinc finger, protein scaffold, DNA 2e-04
2puy_A60 PHD finger protein 21A; PHD finger, histone CODE, 3e-15
2puy_A60 PHD finger protein 21A; PHD finger, histone CODE, 1e-04
1fp0_A88 KAP-1 corepressor; PHD domain, C3HC4 type zinc bin 4e-14
2ku3_A71 Bromodomain-containing protein 1; PHD finger, chro 3e-12
2ku3_A71 Bromodomain-containing protein 1; PHD finger, chro 2e-04
2l43_A88 N-teminal domain from histone H3.3, linker, PHD1 f 3e-12
2l43_A88 N-teminal domain from histone H3.3, linker, PHD1 f 4e-04
1f62_A51 Transcription factor WSTF; Zn-finger; NMR {Homo sa 1e-11
1f62_A51 Transcription factor WSTF; Zn-finger; NMR {Homo sa 5e-06
2ro1_A189 Transcription intermediary factor 1-beta; KAP, TIF 2e-11
3v43_A112 Histone acetyltransferase KAT6A; MOZ, PHD finger, 4e-11
3v43_A112 Histone acetyltransferase KAT6A; MOZ, PHD finger, 3e-09
2e6s_A77 E3 ubiquitin-protein ligase UHRF2; PHD domain, str 6e-11
2e6s_A77 E3 ubiquitin-protein ligase UHRF2; PHD domain, str 3e-04
2e6r_A92 Jumonji/ARID domain-containing protein 1D; PHD dom 6e-11
2e6r_A92 Jumonji/ARID domain-containing protein 1D; PHD dom 3e-05
2kwj_A114 Zinc finger protein DPF3; acetyl-lysine, transcrip 1e-10
3ask_A226 E3 ubiquitin-protein ligase UHRF1; histone reader 2e-10
3ask_A226 E3 ubiquitin-protein ligase UHRF1; histone reader 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
3asl_A70 E3 ubiquitin-protein ligase UHRF1; histone reader 2e-10
3asl_A70 E3 ubiquitin-protein ligase UHRF1; histone reader 5e-05
3shb_A77 E3 ubiquitin-protein ligase UHRF1; unmodified hist 2e-10
3shb_A77 E3 ubiquitin-protein ligase UHRF1; unmodified hist 4e-04
2yt5_A66 Metal-response element-binding transcription facto 5e-09
3o36_A184 Transcription intermediary factor 1-alpha; TRIM24, 1e-08
1wev_A88 Riken cDNA 1110020M19; structural genomics, PHD do 2e-08
1wev_A88 Riken cDNA 1110020M19; structural genomics, PHD do 5e-04
1z4r_A168 General control of amino acid synthesis protein 5- 4e-08
3a1b_A159 DNA (cytosine-5)-methyltransferase 3A, histone H3; 1e-07
2pv0_B386 DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, 4e-07
3u5n_A207 E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, b 9e-07
2k16_A75 Transcription initiation factor TFIID subunit 3; p 2e-06
2k16_A75 Transcription initiation factor TFIID subunit 3; p 5e-05
1qst_A160 TGCN5 histone acetyl transferase; GCN5-related N-a 9e-06
3pur_A 528 Lysine-specific demethylase 7 homolog; oxidoreduct 2e-04
2jmi_A90 Protein YNG1, ING1 homolog 1; PHD, histone, recogn 4e-04
2ri7_A174 Nucleosome-remodeling factor subunit BPTF; zinc fi 5e-04
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A Length = 129 Back     alignment and structure
 Score = 81.8 bits (201), Expect = 1e-18
 Identities = 21/118 (17%), Positives = 40/118 (33%), Gaps = 18/118 (15%)

Query: 444 GCKQGNGIVCDCCNKEISPSQFEAHAGMAARRQPYRHIYTSNGMTLHDIAISLAMGQRRT 503
                  + C  C ++++  Q ++       R P   +        + ++  ++      
Sbjct: 2   PLGSMGIVSCTACGQQVNHFQKDS-----IYRHPSLQVLICKNCFKYYMSDDISRDSD-- 54

Query: 504 TGGSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL---------IPESGWRCPNCRQ 552
             G D+ C  C +G NL+ C+ C  AF   C+   L            + W C  C  
Sbjct: 55  --GMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110


>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A Length = 129 Back     alignment and structure
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A Length = 142 Back     alignment and structure
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A Length = 142 Back     alignment and structure
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens} Length = 111 Back     alignment and structure
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens} Length = 61 Back     alignment and structure
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens} Length = 61 Back     alignment and structure
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 56 Back     alignment and structure
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 56 Back     alignment and structure
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A Length = 66 Back     alignment and structure
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A Length = 66 Back     alignment and structure
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A Length = 61 Back     alignment and structure
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A Length = 61 Back     alignment and structure
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens} Length = 60 Back     alignment and structure
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens} Length = 60 Back     alignment and structure
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2 Length = 88 Back     alignment and structure
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens} Length = 71 Back     alignment and structure
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens} Length = 71 Back     alignment and structure
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens} Length = 88 Back     alignment and structure
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens} Length = 88 Back     alignment and structure
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2 Length = 51 Back     alignment and structure
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2 Length = 51 Back     alignment and structure
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens} Length = 189 Back     alignment and structure
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A Length = 112 Back     alignment and structure
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A Length = 112 Back     alignment and structure
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 77 Back     alignment and structure
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 77 Back     alignment and structure
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 92 Back     alignment and structure
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 92 Back     alignment and structure
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A* Length = 114 Back     alignment and structure
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens} Length = 226 Back     alignment and structure
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens} Length = 226 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B Length = 70 Back     alignment and structure
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B Length = 70 Back     alignment and structure
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens} Length = 77 Back     alignment and structure
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens} Length = 77 Back     alignment and structure
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus} Length = 66 Back     alignment and structure
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A Length = 184 Back     alignment and structure
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2 Length = 88 Back     alignment and structure
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2 Length = 88 Back     alignment and structure
>1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B* Length = 168 Back     alignment and structure
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A* Length = 159 Back     alignment and structure
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B* Length = 386 Back     alignment and structure
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A* Length = 207 Back     alignment and structure
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A* Length = 75 Back     alignment and structure
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A* Length = 75 Back     alignment and structure
>1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A* Length = 160 Back     alignment and structure
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A* Length = 528 Back     alignment and structure
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A* Length = 90 Back     alignment and structure
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A* Length = 174 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 805
d1fp0a170 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF- 3e-12
d1fp0a170 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF- 2e-05
d1mm2a_61 g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens 1e-11
d1mm2a_61 g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens 9e-06
d1f62a_51 g.50.1.2 (A:) Williams-Beuren syndrome transcripti 1e-10
d1f62a_51 g.50.1.2 (A:) Williams-Beuren syndrome transcripti 8e-07
d1we9a_64 g.50.1.2 (A:) PHD finger protein At5g26210 {Thale 4e-09
d1we9a_64 g.50.1.2 (A:) PHD finger protein At5g26210 {Thale 9e-05
d1weva_88 g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus mu 2e-07
d1weva_88 g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus mu 1e-05
d1ygha_164 d.108.1.1 (A:) Catalytic domain of GCN5 histone ac 4e-07
d1wema_76 g.50.1.2 (A:) Death associated transcription facto 9e-07
d1wema_76 g.50.1.2 (A:) Death associated transcription facto 1e-04
d1weea_72 g.50.1.2 (A:) PHD finger protein At1g33420 {Thale 2e-06
d1weea_72 g.50.1.2 (A:) PHD finger protein At1g33420 {Thale 1e-04
d1wepa_79 g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus mus 3e-05
d1wesa_71 g.50.1.2 (A:) PHD Inhibitor of growth protein 2, I 0.003
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} Length = 70 Back     information, alignment and structure

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Nuclear corepressor KAP-1 (TIF-1beta)
species: Human (Homo sapiens) [TaxId: 9606]
 Score = 60.0 bits (145), Expect = 3e-12
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 506 GSDDMCHVCGDGENLLLCNGCPLAFHAACLDPLL--IPESGWRCPNCR 551
            S  +C VC    +L++CN C   FH  C  P L  +P   W C  C 
Sbjct: 5   DSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCH 52


>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} Length = 70 Back     information, alignment and structure
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} Length = 61 Back     information, alignment and structure
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} Length = 61 Back     information, alignment and structure
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} Length = 51 Back     information, alignment and structure
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} Length = 51 Back     information, alignment and structure
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64 Back     information, alignment and structure
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64 Back     information, alignment and structure
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88 Back     information, alignment and structure
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88 Back     information, alignment and structure
>d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 164 Back     information, alignment and structure
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 76 Back     information, alignment and structure
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 76 Back     information, alignment and structure
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 72 Back     information, alignment and structure
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 72 Back     information, alignment and structure
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} Length = 79 Back     information, alignment and structure
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 71 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query805
d1z4ra1162 Catalytic domain of GCN5 histone acetyltransferase 99.15
d1qsra_162 Catalytic domain of GCN5 histone acetyltransferase 99.1
d1ygha_164 Catalytic domain of GCN5 histone acetyltransferase 98.97
d1fp0a170 Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo 98.74
d1mm2a_61 Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606 98.63
d1q2ya_140 Probable acetyltransferase YjcF {Bacillus subtilis 98.41
d1yvka1152 Hypothetical protein YvbK (BSu33890) {Bacillus sub 98.31
d1y9ka1152 IAA acetyltransferase {Bacillus cereus [TaxId: 139 98.28
d1f62a_51 Williams-Beuren syndrome transcription factor, WST 98.25
d2jdca1145 Probable acetyltransferase YitI {Bacillus lichenif 98.23
d1y7ra1133 Hypothetical protein SA2161 {Staphylococcus aureus 98.22
d1mm2a_61 Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606 98.2
d1n71a_180 Aminoglycoside 6'-N-acetyltransferase {Enterococcu 98.2
d1fp0a170 Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo 98.17
d2atra1137 Probable acetyltransferase SP0256 {Streptococcus p 98.13
d1yx0a1151 Hypothetical protein YsnE {Bacillus subtilis [TaxI 98.11
d1y9wa1140 Probable acetyltransferase BC2806 {Bacillus cereus 98.07
d1ghea_170 Tabtoxin resistance protein {Pseudomonas syringae 98.02
d1weva_88 PHD finger protein 22 {Mouse (Mus musculus) [TaxId 97.97
d1u6ma_189 Putative acetyltransferase EF0945 {Enterococcus fa 97.97
d1bo4a_137 Aminoglycoside 3-N-acetyltransferase {Serratia mar 97.96
d2aj6a1118 Hypothetical protein MW0638 {Staphylococcus aureus 97.94
d2fiwa1156 Probable N-acetyltransferase RPA1999 {Rhodopseudom 97.92
d2g3aa1137 Probable acetyltransferase Atu2258 {Agrobacterium 97.9
d2fe7a1156 Probable N-acetyltransferase PA0478 {Pseudomonas a 97.88
d1f62a_51 Williams-Beuren syndrome transcription factor, WST 97.87
d1vkca_149 Putative acetyltransferase PF0028 {Pyrococcus furi 97.87
d1tiqa_173 Protease synthase and sporulation negative regulat 97.85
d2ozga2 283 Putative acetyltransferase Ava4977 {Anabaena varia 97.78
d1weva_88 PHD finger protein 22 {Mouse (Mus musculus) [TaxId 97.74
d1s3za_147 Aminoglycoside N-acetyltransferase AAC(6')-IY {Sal 97.72
d2gana1182 Hypothetical protein PH0736 {Pyrococcus horikoshii 97.72
d1i12a_157 Glucosamine-phosphate N-acetyltransferase GNA1 {Ba 97.7
d2hv2a2 285 Hypothetical protein EF1021 {Enterococcus faecalis 97.69
d2fiaa1157 Probable acetyltransferase EF1919 {Enterococcus fa 97.69
d2i00a2 291 Putative acetyltransferase EF2353 {Enterococcus fa 97.67
d1r57a_102 Hypothetical protein SA2309 {Staphylococcus aureus 97.62
d1oqja_90 Glucocorticoid modulatory element binding protein- 97.62
d1mk4a_157 Hypothetical protein YqiY {Bacillus subtilis [TaxI 97.6
d2fl4a1146 Probable spermine/spermidine acetyltransferase EF1 97.56
d1wesa_71 PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mu 97.54
d1yr0a1163 Phosphinothricin acetyltransferase {Agrobacterium 97.54
d1xeba_149 Hypothetical protein PA0115 {Pseudomonas aeruginos 97.52
d1z4ea1150 Transcriptional regulator BH1968 {Bacillus halodur 97.51
d1weea_72 PHD finger protein At1g33420 {Thale cress (Arabido 97.49
d2ae6a1161 Putative acetyltransferase EF0244 {Enterococcus fa 97.48
d1ufha_155 Putative acetyltransferase YycN {Bacillus subtilis 97.46
d2cy2a1174 Probable acetyltransferase TTHA1209 {Thermus therm 97.45
d1ufna_94 Putative nuclear protein homolog 5830484a20rik {Mo 97.42
d1wesa_71 PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mu 97.41
d1vhsa_165 Putative phosphinothricin acetyltransferase YwnH { 97.34
d1yvoa1169 Hypothetical protein PA4866 {Pseudomonas aeruginos 97.24
d2euia1153 Probable acetyltransferase PA4026 {Pseudomonas aer 97.22
d1wwza1157 Hypothetical protein PH1933 {Pyrococcus horikoshii 97.2
d1qsma_150 Histone acetyltransferase HPA2 {Baker's yeast (Sac 97.18
d1h5pa_95 Nuclear autoantigen Sp100b {Human (Homo sapiens) [ 97.16
d2i6ca1160 Putative acetyltransferase PA4794 {Pseudomonas aer 97.16
d1we9a_64 PHD finger protein At5g26210 {Thale cress (Arabido 97.15
d1wepa_79 PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 97.08
d1m4ia_181 Aminoglycoside 2'-N-acetyltransferase {Mycobacteri 97.06
d2pnxa151 Inhibitor of growth protein 4, Ing4 {Homo sapiens 97.02
d1p0ha_308 Mycothiol synthase MshD {Mycobacterium tuberculosi 96.94
d1cjwa_166 Serotonin N-acetyltranferase {Sheep (Ovis aries) [ 96.89
d2pnxa151 Inhibitor of growth protein 4, Ing4 {Homo sapiens 96.84
d1wema_76 Death associated transcription factor 1, Datf1 (DI 96.76
d2ge3a1164 Probable acetyltransferase Atu2290 {Agrobacterium 96.62
d1sqha_297 Hypothetical protein cg14615-pa {Fruit fly (Drosop 96.54
d1we9a_64 PHD finger protein At5g26210 {Thale cress (Arabido 96.29
d1weea_72 PHD finger protein At1g33420 {Thale cress (Arabido 96.28
d2b5ga1167 Diamine acetyltransferase 1 {Human (Homo sapiens) 96.18
d1yrea1183 Hypothetical protein PA3270 {Pseudomonas aeruginos 96.02
d2beia1167 Diamine acetyltransferase 2 {Human (Homo sapiens) 95.93
d1wewa_78 Sumoylation ligase E3, SIZ1 {Thale cress (Arabidop 95.88
d1wepa_79 PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 95.49
d1nsla_180 Probable acetyltransferase YdaF {Bacillus subtilis 95.07
d1wema_76 Death associated transcription factor 1, Datf1 (DI 95.02
d1wewa_78 Sumoylation ligase E3, SIZ1 {Thale cress (Arabidop 94.98
d1s7ka1174 L7/L12-Ribosomal-protein-serine acetyltransferase 93.72
d2fcka1178 Putative ribosomal-protein-serine acetyltransferas 92.29
d1ufna_94 Putative nuclear protein homolog 5830484a20rik {Mo 92.1
d1wila_89 Hypothetical protein KIAA1045 {Human (Homo sapiens 91.57
d1wila_89 Hypothetical protein KIAA1045 {Human (Homo sapiens 90.81
d1yk3a1198 Hypothetical protein Rv1347c/MT1389 {Mycobacterium 83.48
d1ro5a_197 Autoinducer synthesis protein LasI {Pseudomonas ae 82.34
>d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Catalytic domain of GCN5 histone acetyltransferase
species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15  E-value=2.1e-10  Score=84.74  Aligned_cols=100  Identities=16%  Similarity=0.162  Sum_probs=83.3

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEEEEEE-CCCEEEEEEEEEEC
Q ss_conf             65445677776634045441123688511000045689964373099999659979998787752-67215554554310
Q 003662          692 EKSLLSSATAIFRECFDPIIAECGRDLIPVMVYGRNISGQEFGGMYSVILTVKSVVVSAGLLRIF-GREVAELPLVATCR  770 (805)
Q Consensus       692 ~~s~La~Al~If~EcF~PIv~~tg~DlI~~mVygr~~~~~dF~GfYt~vL~~~~~vvs~a~lrv~-g~~~AElplvAt~~  770 (805)
                      ....|..+..||...|..    ..+|.|..++|..        ...++|+..+++||+++.++.+ ....|||.++||.+
T Consensus        20 ~~~~L~~~~~iF~~~lp~----m~~~yi~r~~~d~--------~~~~~v~~~~~~iIG~i~~~~~~~~~~aeI~~laV~~   87 (162)
T d1z4ra1          20 VLLWLVGLQNVFSHQLPR----MPKEYIARLVFDP--------KHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTS   87 (162)
T ss_dssp             HHHHHHHHHHHHHHHCTT----SCHHHHHHHHTCT--------TCEEEEEEETTEEEEEEEEEEETTTTEEEEEEEEECG
T ss_pred             HHHHHHHHHHHHHHHCCC----CCHHHHHHHHCCC--------CCEEEEEEECCEEEEEEEEEEECCCCEEEEEEEEECH
T ss_conf             999999989999876789----7399999996598--------8469999999999999999997889989999999980


Q ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCC
Q ss_conf             211557146599999999740896559910699
Q 003662          771 EYQGKGCFQALFSCIERLLCSLNVENLVLPACL  803 (805)
Q Consensus       771 ~~r~qG~~r~L~~~iE~~l~~lgV~~lVLPAa~  803 (805)
                      +|||||+|+.||+.+++.++..|+.++++.|-.
T Consensus        88 ~~qgkGiG~~Lm~~l~~~~~~~g~~~i~~~~~~  120 (162)
T d1z4ra1          88 NEQVKGYGTHLMNHLKEYHIKHNILYFLTYADE  120 (162)
T ss_dssp             GGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             365525899999999999987798699992584



>d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]} Back     information, alignment and structure
>d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q2ya_ d.108.1.1 (A:) Probable acetyltransferase YjcF {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1yvka1 d.108.1.1 (A:5-156) Hypothetical protein YvbK (BSu33890) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1y9ka1 d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2jdca1 d.108.1.1 (A:2-146) Probable acetyltransferase YitI {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1y7ra1 d.108.1.1 (A:1-133) Hypothetical protein SA2161 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1n71a_ d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransferase {Enterococcus faecium [TaxId: 1352]} Back     information, alignment and structure
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2atra1 d.108.1.1 (A:1-137) Probable acetyltransferase SP0256 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1ghea_ d.108.1.1 (A:) Tabtoxin resistance protein {Pseudomonas syringae [TaxId: 317]} Back     information, alignment and structure
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1u6ma_ d.108.1.1 (A:) Putative acetyltransferase EF0945 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1bo4a_ d.108.1.1 (A:) Aminoglycoside 3-N-acetyltransferase {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2fiwa1 d.108.1.1 (A:2-157) Probable N-acetyltransferase RPA1999 {Rhodopseudomonas palustris [TaxId: 1076]} Back     information, alignment and structure
>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2fe7a1 d.108.1.1 (A:3-158) Probable N-acetyltransferase PA0478 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vkca_ d.108.1.1 (A:) Putative acetyltransferase PF0028 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1tiqa_ d.108.1.1 (A:) Protease synthase and sporulation negative regulatory protein PaiA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2ozga2 d.108.1.10 (A:8-290) Putative acetyltransferase Ava4977 {Anabaena variabilis [TaxId: 1172]} Back     information, alignment and structure
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1s3za_ d.108.1.1 (A:) Aminoglycoside N-acetyltransferase AAC(6')-IY {Salmonella enteritidis [TaxId: 149539]} Back     information, alignment and structure
>d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2fiaa1 d.108.1.1 (A:1-157) Probable acetyltransferase EF1919 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1oqja_ d.217.1.1 (A:) Glucocorticoid modulatory element binding protein-1 (Gmeb1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mk4a_ d.108.1.1 (A:) Hypothetical protein YqiY {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2fl4a1 d.108.1.1 (A:1-146) Probable spermine/spermidine acetyltransferase EF1086 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1yr0a1 d.108.1.1 (A:4-166) Phosphinothricin acetyltransferase {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1xeba_ d.108.1.1 (A:) Hypothetical protein PA0115 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2ae6a1 d.108.1.1 (A:1-161) Putative acetyltransferase EF0244 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1ufha_ d.108.1.1 (A:) Putative acetyltransferase YycN {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2cy2a1 d.108.1.1 (A:1-174) Probable acetyltransferase TTHA1209 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ufna_ d.217.1.1 (A:) Putative nuclear protein homolog 5830484a20rik {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1vhsa_ d.108.1.1 (A:) Putative phosphinothricin acetyltransferase YwnH {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1yvoa1 d.108.1.1 (A:4-172) Hypothetical protein PA4866 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2euia1 d.108.1.1 (A:1-153) Probable acetyltransferase PA4026 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1wwza1 d.108.1.1 (A:1-157) Hypothetical protein PH1933 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1qsma_ d.108.1.1 (A:) Histone acetyltransferase HPA2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1h5pa_ d.217.1.1 (A:) Nuclear autoantigen Sp100b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]} Back     information, alignment and structure
>d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1cjwa_ d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep (Ovis aries) [TaxId: 9940]} Back     information, alignment and structure
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]} Back     information, alignment and structure
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2ge3a1 d.108.1.1 (A:6-169) Probable acetyltransferase Atu2290 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2b5ga1 d.108.1.1 (A:3-169) Diamine acetyltransferase 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yrea1 d.108.1.1 (A:11-193) Hypothetical protein PA3270 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2beia1 d.108.1.1 (A:3-169) Diamine acetyltransferase 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1nsla_ d.108.1.1 (A:) Probable acetyltransferase YdaF {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1s7ka1 d.108.1.1 (A:3-176) L7/L12-Ribosomal-protein-serine acetyltransferase RimL {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2fcka1 d.108.1.1 (A:1-178) Putative ribosomal-protein-serine acetyltransferase VC1889 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1ufna_ d.217.1.1 (A:) Putative nuclear protein homolog 5830484a20rik {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1yk3a1 d.108.1.1 (A:10-207) Hypothetical protein Rv1347c/MT1389 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ro5a_ d.108.1.3 (A:) Autoinducer synthesis protein LasI {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure