Citrus Sinensis ID: 003666

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800----
Protein Sequence
MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFLNAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPTLHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQVPNLFEADHMEANPLSTYGQTNDDAGNICTLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWTTVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDELKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLSLLLNSPNEAKHDHLPSPEPETSVTPDYLANASAACPVESVENVQLPSPATVSDPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDFSGNQKVSDQVLMQGGSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNGCKSHERNTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDLDPDDQVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCVKRYLDSIMKENRTHEHQS
Secondary Structure (PSIPRED)
ccccccccccccHHHHHccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccHHHHHccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEccEEEEEEcccEEEccccccccEEEEccccccccccccccEEEEEcccccEEEEEcccccEEEccEEcccccccccccccEEEEcccEEEEEEcHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccEEEcccccccHHHHHHccccccccccccccHHHHHHHHHHHHHHHcccccccccccccEcccccccccccccccccccEccccccccccccccccccccccccccccccccEEccccccEEEEccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccEEcccccccccccccccccccccccccHHHHHHHccccccccccEEEEccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccEcccccEEEccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccEEEEEEEccEEEEEccccccEEEEEcccccccccEcHHEEEEEEcccccEEEEEccccEEEEccEEcccccEEEEccccEEEEccEEEEEEEcHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
MFEYERsaltlpkvfsragnskeiklssgkrkaeSVRSCYYALRKRihnepfnsidlsflnapgnrnfygngdeppsrncmlgdpmanhfglqdsnldvmhrkfpdipmdddascrdgptlhrfhggfdhpgeedfsmqqgemheeiphifeenqsfrgngarvvelglpgqvpnlfeadhmeanplstygqtnddagnictlegnqvfrspipdcgapfqdlefssplpempiwttvedsssptitvddsfrekdlhsgdnyalpddsgakdksapgydfvhgnsklKMQMSCDElkneasntEGYLEELSNSLlnftndeeflfmdvdgkemidkSYYDGLSLLlnspneakhdhlpspepetsvtpdylanasaacpvesvenvqlpspatvsdpqfpeqndgimictlntedpeipcnddaflpnnllpssvSIAKrqnfkdagnpfsssvkdfsgnqkvsdqvlmqggstqmvgsqvipgshkhhpvgdsgvkfelhscnssqlaagtscrgsiqnnsmntskdsLQCARLKQDNKEIAMVKDLghtltdsslkkpnfvsngcksherntngvkqeldypaitqeshalnvevgslhipdaepimnpsttepedpsvesddddvpyfsDIEAMILdmdldpddqvskyqhEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGrhskhyikkpevllgratedvvvdidlgregrtnkISRRQAMINMDEAgsfhlknlgkcpilvnnkevpprqsqglgssclieIRGLAFIFETNQTCVKRYLDSIMKEnrthehqs
Flexible Loop (DISEMBL)
mfeyersaltlpkvfsragnskeiklssgkrkaesVRSCYYALRKRIHNEPFNSIDLSFLNAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPTLHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQVPNLFEADHMEANPLSTYGQTNDDAGNICTLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWttvedsssptitVDDSFREKDLHSgdnyalpddsgakdkSAPGYDFVHGNSKLKMQMSCDELKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLSLLLNSPNEAKHDHLPSPEPETSVTPDYLANASAACPVESVENVQLPSPATVSDPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDFSGNQKVSDQVLMQGGSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLghtltdsslkkpnFVSNGCKSHERNTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDLDPDDQVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKpevllgratedvvvdidlgregrtnkisrrQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCVKRYLDSIMKENRTHEHQS
Low Complexity Region (SEG)
MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFLNAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPTLHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQVPNLFEADHMEANPLSTYGQTNDDAGNICTLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWTTVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDELKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLSLLLNSPNEAKHDHLPSPEPETSVTPDYLANASAACPVESVENVQLPSPATVSDPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDFSGNQKVSDQVLMQGGSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNGCKSHERNTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTepedpsvesddddvpYFSDIEAMILDMDLDPDDQVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCVKRYLDSIMKENRTHEHQS
Disordered region (IsUnstruct)
***********************************VRSCYYALRKRIHNEPFNSIDLSFLNAPGNRNFY*******************************************************************************************GARVVELGLPGQVPNLFEA**********YGQTNDDAGNICTLEGNQVFRSPIPDCGAPFQDLEF*******PIWT***********************************************************************LEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLSLLL**********************************************************GIMICTLNTEDPEIPCNDDAFLPN*********************************************************************************************************************************************************************************************************YFSDIEAMILDMD**************TRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRT*******AMINMDEAGSFHLKNLGKCPILVNNK********GLGSSCLIEIRGLAFIFETNQTCVKRYLDSI***********
Disordered Region (DISOPRED)
*********************************ESVRSCYYALRKRIHNEPFNSIDLSFLNAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPM**************FHG************************FEENQS**********************************************************************************************************YALPDDSGAKDKSA******************************YLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLSL********************************************************EQNDGIMICTLNTEDPEIPCNDDAFLPN*************************************************************************************************************************************************************************************************************IEAMILDMDLD******************************AILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCV******************
Disordered Region (DISEMBL)
MFEYERSALTLPKVFSRAGNS**************VRSCYYALRKRIHNEPFNSIDLSFLNAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPTLHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQVPNLFEADHMEANPLSTYGQTNDDAGNICTLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWTTVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDELKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLSLLLNSPNE**************VTPDYLANASAACPVESVENVQLPSPATVSDPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDFSGNQKVSDQVLMQGGSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNGCKSHERNTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNP*************DDDVPYFSDIEAMILDMDLDPDDQVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCVKRYLDSIMKE********
Disordered Region (DISPRO)
********LTLPKVFSR*GNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFLNAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPTLHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQVPNLFEADHMEANPLSTYGQTNDDAGNICTLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWTTVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDELKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLSLLLNSPNEAK**********TSVTPDYLANASAACPVESVENVQLPSPATVSDPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIA*****************************************************************NS*QLAAG*SC***************************IAMVKDLGHTLTDSSLKKPNFVSN***************LDYPA****************************************DDVPYFSDIEAMILDMDLDPDDQVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCVKRYLDSIMKE********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFLNAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPTLHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQVPNLFEADHMEANPLSTYGQTNDDAGNICTLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWTTVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSxxxxxxxxxxxxxxxxxxxxxLLNFTNDEEFLFMDVDGKEMIDKSYYDGLSLLLNSPNEAKHDHLPSPEPETSVTPDYLANASAACPVESVENVQLPSPATVSDPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDFSGNQKVSDQVLMQGGSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNGCKSHERNTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDLDPDDQVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCVKRYLDSIMKENRTHEHQS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	804	2.2.26 [Sep-21-2011]
Q99L90	462	Microspherule protein 1 O	yes	no	0.196	0.341	0.340	6e-16
Q96EZ8	462	Microspherule protein 1 O	yes	no	0.196	0.341	0.340	3e-15
P40466	484	Fork head protein homolog	yes	no	0.118	0.196	0.324	0.0004

>sp|Q99L90|MCRS1_MOUSE Microspherule protein 1 OS=Mus musculus GN=Mcrs1 PE=1 SV=1

 Score = 87.0 bits (214), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 92/176 (52%), Gaps = 18/176 (10%)

Query: 627 DDVPYFSDIEAMILDMDL-DPDDQVSKYQHEDT------RRAIIRLEQGAHSY--MQRAI 677
           D V  FSD E +I D  L D  D+V   +HE T      +R I +LEQ  H +  +  +I
Sbjct: 276 DQVLNFSDAEDLIDDSKLKDMRDEV--LEHELTVADRRQKREIRQLEQELHKWQVLVDSI 333

Query: 678 LSHGA-------FAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAM 730
              G+        A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q +
Sbjct: 334 TGMGSPDFDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGV 393

Query: 731 INMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCV 786
           I +   G F + N G+ PI ++ + V       L ++ ++EI  L F+F  NQ  +
Sbjct: 394 IKLKNNGDFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLI 449

Modulates the transcription repressor activity of DAXX by recruiting it to the nucleolus. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues. Putative regulatory component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. May also be an inhibitor of TERT telomerase activity.
Mus musculus (taxid: 10090)

>sp|Q96EZ8|MCRS1_HUMAN Microspherule protein 1 OS=Homo sapiens GN=MCRS1 PE=1 SV=1

 Score = 84.7 bits (208), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 89/176 (50%), Gaps = 18/176 (10%)

Query: 627 DDVPYFSDIEAMILDMDL-DPDDQVSKYQHE----DTR--RAIIRLEQGAHSY------- 672
           D V  FSD E +I D  L D  D+V   +HE    D R  R I +LEQ  H +       
Sbjct: 276 DQVLNFSDAEDLIDDSKLKDMRDEV--LEHELMVADRRQKREIRQLEQELHKWQVLVDSI 333

Query: 673 --MQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAM 730
             M      +   A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q +
Sbjct: 334 TGMSSPDFDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGV 393

Query: 731 INMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCV 786
           I +   G F + N G+ PI ++ + V       L ++ ++EI  L F+F  NQ  +
Sbjct: 394 IKLKNNGDFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLI 449

Modulates the transcription repressor activity of DAXX by recruiting it to the nucleolus. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues. Putative regulatory component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. May also be an inhibitor of TERT telomerase activity.

Homo sapiens (taxid: 9606)

>sp|P40466|FKH1_YEAST Fork head protein homolog 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FKH1 PE=1 SV=1

 Score = 47.4 bits (111), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 19/114 (16%)

Query: 682 AFAILYGRHSKHYIKKPEVLLGRATED---------VV---VDIDLGREGRTNKISRRQA 729
           A+A + G    +Y++K EV +GR T+          VV   +DIDL   G    +SR+ A
Sbjct: 58  AYAKIAGCDWTYYVQKLEVTIGRNTDSLNLNAVPGTVVKKNIDIDL---GPAKIVSRKHA 114

Query: 730 MINMD-EAGSFHLKNLGKCPILVNNKEVPP---RQSQGLGSSCLIEIRGLAFIF 779
            I  + E+GS+ L+  G+    VN + +P         L S C+I+I G+  IF
Sbjct: 115 AIRFNLESGSWELQIFGRNGAKVNFRRIPTGPDSPPTVLQSGCIIDIGGVQMIF 168

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	804
359492711	1030	PREDICTED: uncharacterized protein LOC10	0.958	0.748	0.526	0.0
302142589	789	unnamed protein product [Vitis vinifera]	0.868	0.884	0.509	0.0
255538816	776	conserved hypothetical protein [Ricinus	0.667	0.692	0.530	1e-152
449438524	870	PREDICTED: uncharacterized protein LOC10	0.952	0.880	0.436	1e-144
356509648	841	PREDICTED: uncharacterized protein LOC10	0.911	0.871	0.393	1e-133
356518000	841	PREDICTED: uncharacterized protein LOC10	0.901	0.862	0.388	1e-125
357466877	845	Microspherule protein [Medicago truncatu	0.876	0.834	0.367	1e-124
224082944	733	predicted protein [Populus trichocarpa]	0.603	0.661	0.478	1e-116
297735058	819	unnamed protein product [Vitis vinifera]	0.868	0.852	0.373	1e-115
224066050	728	predicted protein [Populus trichocarpa]	0.606	0.670	0.466	1e-115

>gi|359492711|ref|XP_002280739.2| PREDICTED: uncharacterized protein LOC100254089 [Vitis vinifera]

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/825 (52%), Positives = 543/825 (65%), Gaps = 54/825 (6%)

Query: 1    MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFL 60
            M E+ERSA TLP  F+R GNSKE K   GKRKAE++RSCYYALRKRI NEPFNS+DLSFL
Sbjct: 210  MIEFERSASTLPSKFNRFGNSKENKCVPGKRKAETIRSCYYALRKRICNEPFNSMDLSFL 269

Query: 61   NAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPT 120
             AP N N  GNGDEP S N ML DP++NHF  Q+ +LD+MH  FP +  D+ A+   G +
Sbjct: 270  VAPSNSNCVGNGDEPVSPNYMLEDPISNHFRTQEPSLDIMHCAFPQMVTDNAAASGAGTS 329

Query: 121  LHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQV--PNLFE 178
             H FH    +P +ED  ++Q  +H+EIP I  EN    GN + + ELG P ++   NLFE
Sbjct: 330  AHGFHAAVQNPVKEDLPIEQNSIHKEIPQILGENLPHTGNCSGIDELGEPKELLACNLFE 389

Query: 179  ADHMEANPLSTYGQTNDDAGNICT-LEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWTT 237
            AD +EA P ST+   N D GN+C+   GNQ F  P  DCGA F +L +SSPLP MPIW T
Sbjct: 390  ADDLEAKPPSTFDLINSDLGNVCSEFGGNQAFDLPGSDCGASFDNLGYSSPLPGMPIWDT 449

Query: 238  VEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDEL 297
            VE  S+P + VD S  +KD H+ D +ALP+D  AK  S  GYD V   +KLK  M CD+L
Sbjct: 450  VEGISAPDLPVDTSLGKKDHHTEDTFALPNDGHAKINSVSGYDVVPSETKLKNSMPCDQL 509

Query: 298  KNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGL-SLLLNSPNEAKHD 356
             N  S+ +GYL ELSNSLL+F NDE  LFMDVDGK++IDKSYYDGL SLLL+SP ++  D
Sbjct: 510  NN--SSPDGYLAELSNSLLDFPNDE-LLFMDVDGKDIIDKSYYDGLNSLLLSSPTDSNQD 566

Query: 357  HLPS-PEPETSVTPD-YLANASAACPVE-----SVE--------NVQLPSPATVSD--PQ 399
            H+P   EPE SV PD YL     AC  E     S+         N + P  +T  D  PQ
Sbjct: 567  HVPDITEPEASVGPDAYLVIPQGACAGELDNNGSIHCGDGHADCNPEAPMLSTAVDLNPQ 626

Query: 400  FPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDFS 459
            FPE  +G++ C LNTEDP+IPCNDD FLPN +  S +S A + +F +A NP SS+VKDF+
Sbjct: 627  FPEMCNGVICCALNTEDPDIPCNDDVFLPNQIPLSPLSSAAQLSFHEANNPTSSAVKDFT 686

Query: 460  GNQKVSDQV-------LMQGG----STQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQ 508
             NQK S++        L   G    S++M GSQ +     +HPVGD  +KFEL   +S+ 
Sbjct: 687  DNQKSSERCPSLLKRELKSPGQSHVSSRMKGSQALSKIGLNHPVGDCDIKFELTESDSTH 746

Query: 509  LA---AGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVS 565
            +A   AG  C G+   N +N    +     LK++ KEI   + + +  TDS ++KP    
Sbjct: 747  MASRSAGLVC-GNSSLNPVNVKAHTPLPKMLKEETKEIKPARQMSYNSTDSFMEKPVHGF 805

Query: 566  NGCKSH-ERNTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVES 624
            +G +S+ + N  G+KQE+D  +  Q   AL+           +P++NPS+ + E+  +ES
Sbjct: 806  DGFRSYPQTNACGIKQEVDAISTAQNHQALDFAA-------LDPVVNPSSPDQEEQPIES 858

Query: 625  DDDDVPYFSDIEAMILDMDLDPDDQ------VSKYQHEDTRRAIIRLEQGAHSYMQRAIL 678
            DDD +PY SDIEAMILDMDLDPDDQ      VS+YQ+E+T+RAIIRLEQG HSYMQR I 
Sbjct: 859  DDD-IPYVSDIEAMILDMDLDPDDQEYCRGEVSRYQYENTKRAIIRLEQGFHSYMQRTIA 917

Query: 679  SHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGS 738
            +HGAFA+LYGRHSKHYIKKPEVLLGRATEDV VDIDLGREG  NKISRRQA+I M+  GS
Sbjct: 918  THGAFAVLYGRHSKHYIKKPEVLLGRATEDVTVDIDLGREGCANKISRRQAIIKMERGGS 977

Query: 739  FHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQ 783
            F LKNLGK  IL+N K+V P +S  L   CLIEIRG+ FIFETNQ
Sbjct: 978  FSLKNLGKRAILMNGKDVAPGESVSLTCGCLIEIRGMPFIFETNQ 1022

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142589|emb|CBI19792.3| unnamed protein product [Vitis vinifera]

 Score =  700 bits (1806), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/795 (50%), Positives = 501/795 (63%), Gaps = 97/795 (12%)

Query: 1   MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFL 60
           M E+ERSA TLP  F+R GNSKE K   GKRKAE++RSCYYALRKRI NEPFNS+DLSFL
Sbjct: 72  MIEFERSASTLPSKFNRFGNSKENKCVPGKRKAETIRSCYYALRKRICNEPFNSMDLSFL 131

Query: 61  NAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPT 120
            AP N N  GNGDEP S N ML DP++NHF  Q+ +LD+MH  FP +  D+ A+   G +
Sbjct: 132 VAPSNSNCVGNGDEPVSPNYMLEDPISNHFRTQEPSLDIMHCAFPQMVTDNAAASGAGTS 191

Query: 121 LHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQV--PNLFE 178
            H FH                     IP I  EN    GN + + ELG P ++   NLFE
Sbjct: 192 AHGFHAA-------------------IPQILGENLPHTGNCSGIDELGEPKELLACNLFE 232

Query: 179 ADHMEANPLSTYGQTNDDAGNICT-LEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWTT 237
           AD +EA P ST+   N D GN+C+   GNQ F  P  DCGA F +L +SSPLP MPIW T
Sbjct: 233 ADDLEAKPPSTFDLINSDLGNVCSEFGGNQAFDLPGSDCGASFDNLGYSSPLPGMPIWDT 292

Query: 238 VEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDEL 297
           VE  S+P + VD S  +KD H+ D +ALP+D  AK  S  GYD V   +KLK  M CD+L
Sbjct: 293 VEGISAPDLPVDTSLGKKDHHTEDTFALPNDGHAKINSVSGYDVVPSETKLKNSMPCDQL 352

Query: 298 KNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGL-SLLLNSPNEAKHD 356
            N  S+ +GYL ELSNSLL+F NDE  LFMDVDGK++IDKSYYDGL SLLL+SP ++  D
Sbjct: 353 NN--SSPDGYLAELSNSLLDFPNDE-LLFMDVDGKDIIDKSYYDGLNSLLLSSPTDSNQD 409

Query: 357 HLPS-PEPETSVTPDYLANASAACPVESVENVQLPSPATVSDPQFPEQNDGIMICTLNTE 415
           H+P   EPE SV PD    A    P E+     + S A   +PQFPE  +G++ C LNTE
Sbjct: 410 HVPDITEPEASVGPD----AYLVIPQEA----PMLSTAVDLNPQFPEMCNGVICCALNTE 461

Query: 416 DPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDFSGNQKVSDQVLMQGGST 475
           DP+IPCNDD FLPN +  S +S A + +F +A NP SS+VKDF+ NQK            
Sbjct: 462 DPDIPCNDDVFLPNQIPLSPLSSAAQLSFHEANNPTSSAVKDFTDNQK------------ 509

Query: 476 QMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCAR 535
                           +GD  +KFEL   +S+ +A+                    + A 
Sbjct: 510 ---------------SIGDCDIKFELTESDSTHMAS--------------------RSAG 534

Query: 536 LKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNGCKSH-ERNTNGVKQELDYPAITQESHAL 594
           L   N +I   + + +  TDS ++KP    +G +S+ + N  G+KQE+D  +  Q   AL
Sbjct: 535 LVCGNSKIKPARQMSYNSTDSFMEKPVHGFDGFRSYPQTNACGIKQEVDAISTAQNHQAL 594

Query: 595 NVEVGSLHIPDAEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDLDPDDQ----- 649
           +           +P++NPS+ + E+  +ESDDD +PY SDIEAMILDMDLDPDDQ     
Sbjct: 595 DFAA-------LDPVVNPSSPDQEEQPIESDDD-IPYVSDIEAMILDMDLDPDDQEYCRG 646

Query: 650 -VSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATED 708
            VS+YQ+E+T+RAIIRLEQG HSYMQR I +HGAFA+LYGRHSKHYIKKPEVLLGRATED
Sbjct: 647 EVSRYQYENTKRAIIRLEQGFHSYMQRTIATHGAFAVLYGRHSKHYIKKPEVLLGRATED 706

Query: 709 VVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSC 768
           V VDIDLGREG  NKISRRQA+I M+  GSF LKNLGK  IL+N K+V P +S  L   C
Sbjct: 707 VTVDIDLGREGCANKISRRQAIIKMERGGSFSLKNLGKRAILMNGKDVAPGESVSLTCGC 766

Query: 769 LIEIRGLAFIFETNQ 783
           LIEIRG+ FIFETNQ
Sbjct: 767 LIEIRGMPFIFETNQ 781

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538816|ref|XP_002510473.1| conserved hypothetical protein [Ricinus communis] gi|223551174|gb|EEF52660.1| conserved hypothetical protein [Ricinus communis]

 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 300/566 (53%), Positives = 383/566 (67%), Gaps = 29/566 (5%)

Query: 261 DNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDELKNEASNTEGYLEELSNSLLNFTN 320
           D ++LP +   K+     YD VHG S LK+++  +E+KN  ++TEGYL ELSNSLLNFTN
Sbjct: 216 DTFSLPCNDDTKNTCLSEYD-VHGESSLKLEIPSEEMKNVNASTEGYLAELSNSLLNFTN 274

Query: 321 DEEFLFMDVDGKEMIDKSYYDGLS-LLLNSPNEAKHDHLPS-PEPETSVTPDYLANASAA 378
           +EE LF DVDGK+ IDKSYYDGLS LLLNSPN+   + +P   EP++S+TPDY+ N   A
Sbjct: 275 EEELLFTDVDGKDAIDKSYYDGLSSLLLNSPNDISQERMPDITEPDSSLTPDYIVNQCGA 334

Query: 379 CPVESVENVQLPSPATV--SDPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSV 436
              E  E+    +   +  S+ Q PE    ++ICTLNTEDPEIPCNDD    N+L P S 
Sbjct: 335 SHGELDEDRGSDTGDVIGHSEVQLPELCVEVIICTLNTEDPEIPCNDDIVFTNHLRPKSF 394

Query: 437 SIAKRQNFKDAGNPFSSSVKDFSGNQKVSDQ--VLMQGG---------STQMVGSQVIPG 485
           S   R+NF+D+G   SS+VK+FS N K S+   +L+Q           S+QM+ SQV P 
Sbjct: 395 SSVARRNFQDSGKSNSSTVKEFSNNPKTSEGGPILVQRDVVNPGQSHLSSQMIRSQVKPE 454

Query: 486 SHKHHPVGDSGVKFELHSCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAM 545
              HHPVGD G KF+L S + + +  G +  GS +N SM      L  A+ K++  E+  
Sbjct: 455 IGSHHPVGDHGNKFDLPSSSFTHMNKGIAYGGSSKNGSMEI----LVAAKPKEETPEVVP 510

Query: 546 VKDLGHTLTDSSLKKPNFVSNGCKSHER-NTNGVKQELDYPAITQESHALNVEVGSLHIP 604
           VK   H   DSS++KP F  +  K H   +  G+KQ+ D PA  Q     + ++ S    
Sbjct: 511 VKHFNHNSVDSSIEKPVFGPDSYKCHAHTDACGLKQDPDAPARIQNHQPAHAKLVSAENA 570

Query: 605 DAEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDLDPDDQ-------VSKYQHED 657
            +E ++N   ++PE+P +ESDDD +PYFSDIEAMILDMDLDP+DQ       VS+YQHED
Sbjct: 571 ASEQVVNYPVSDPEEPPIESDDD-IPYFSDIEAMILDMDLDPEDQDLYLSEEVSRYQHED 629

Query: 658 TRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGR 717
           T+R I+RLEQGA SYMQRAI   GAFA+LYGR SKHYIKK EVLLGRATEDV+VDIDLGR
Sbjct: 630 TKRVIMRLEQGAQSYMQRAIALQGAFAVLYGRRSKHYIKKSEVLLGRATEDVIVDIDLGR 689

Query: 718 EGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAF 777
           EGR NK+SR+QA IN+D++GSFHLKN+GKC I VN+KE+ P QS  L SSCLIEIRG+ F
Sbjct: 690 EGRANKVSRKQATINLDKSGSFHLKNIGKCSISVNDKEMAPGQSLSLTSSCLIEIRGMPF 749

Query: 778 IFETNQTCVKRYLDSIMKENRTHEHQ 803
           IFETNQ CVK+YLD  M++N+T  HQ
Sbjct: 750 IFETNQACVKQYLDGTMQKNQTQVHQ 775

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438524|ref|XP_004137038.1| PREDICTED: uncharacterized protein LOC101220419 [Cucumis sativus] gi|449479124|ref|XP_004155512.1| PREDICTED: uncharacterized LOC101220419 [Cucumis sativus]

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 367/841 (43%), Positives = 489/841 (58%), Gaps = 75/841 (8%)

Query: 1   MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFL 60
           M ++ERS+  LP  F++ GN KE K   GKRK  +VR  YY LR+RI NEPFN +DL FL
Sbjct: 68  MIDFERSS-PLPSKFNKFGNPKETKCIGGKRKYGTVRRRYYTLRRRICNEPFNPMDLGFL 126

Query: 61  NAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMD-DDASCRDGP 119
             P + N+    +EP S NC+   P ++ FGLQ S L ++   F    M+ DDA      
Sbjct: 127 VGPSDSNY--GVEEPISGNCI--PPTSDGFGLQGSELGILQCNFAQNGMNTDDAE----- 177

Query: 120 TLHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVEL----GLPGQVPN 175
             H FH    H  E+ FS       E I HI  E+     N + V E+    G P  V +
Sbjct: 178 --HTFHSECQHTVEKHFSRSLENGQEGISHIMGESLPLSANESHVEEMAPSAGFP--VHS 233

Query: 176 LFEADHMEANPLSTYGQ-TNDDAGNICTLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPI 234
           LF+ D +E    ST+GQ +ND       LE N VF SP+ D GA F ++E+SSPLP MPI
Sbjct: 234 LFDND-LEVRH-STFGQLSNDQRAMGSELEDNDVFNSPVSDSGASFHNVEYSSPLPGMPI 291

Query: 235 WTTVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKD---KSAPGYDFVHGNSKLKMQ 291
           W    ++S+P + +D  F +KD+  GD++ LPDD G K+       GYD  H + KLK++
Sbjct: 292 W---RNASAPALPIDVGFADKDMPIGDSFDLPDDDGNKNIQNARLAGYD-AHSDLKLKIE 347

Query: 292 MSCDELKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLS-LLLNSP 350
           +  D LK+  +  E    ELSNSLLN +N++E LFMDVDGK++IDKSYYDGLS LLLNSP
Sbjct: 348 VQHDHLKSPNATAEVDFAELSNSLLNLSNEDELLFMDVDGKDVIDKSYYDGLSSLLLNSP 407

Query: 351 NEAKHDHLPSP-EPETSVTPDYLANASAACPVESVE-------------NVQLPSPATVS 396
           NE  HD   +    ET    D L +   AC  +  E             +   PSP+   
Sbjct: 408 NEVNHDQTTTGINAETGWPTDALVDPPTACSGKLYEKESHGGVGHLDCSSEAHPSPSASL 467

Query: 397 DPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVK 456
             Q P + +  + C LNTEDPEIP NDD FLP  L P          F+D+     SS K
Sbjct: 468 GSQCPGKGNEPLFCALNTEDPEIPSNDDVFLPP-LTPMG------SQFQDST---FSSTK 517

Query: 457 DFSGNQKVSDQ---VLMQGGSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQLAAGT 513
           DF+ ++K  +    V  +    Q       P   + H VG + V       N ++L+ G 
Sbjct: 518 DFTYDEKSGETQYLVRERKNHGQPRALHGFPERVEKHLVGGASV-------NLNKLSHGN 570

Query: 514 SCRGSIQNN--SMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNGCKSH 571
           S   S  NN  S+N + D++Q    K++N EI+ V  LG    ++ ++KP F S+  + +
Sbjct: 571 SRHLSPVNNISSINVNSDAIQPVVFKEENNEISRVNHLGQNFLNAHVEKPGFDSDNVRRY 630

Query: 572 ERNTN-GVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDDDDVP 630
             +   G+KQE D  A T + H L+ E G+  +  AE     ST++ +D      +DD+P
Sbjct: 631 TPSAACGIKQEPDILA-TLKDHRLSQEEGTQGVFCAEQDGISSTSDQDDLLSIDSEDDIP 689

Query: 631 YFSDIEAMILDMDLDPDDQ-------VSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAF 683
           +FSDIEAMILDMDLDP+DQ       V KYQH +TR++IIRLEQGA++  QR+I SHGA 
Sbjct: 690 HFSDIEAMILDMDLDPEDQELYSSEEVLKYQHVETRKSIIRLEQGANACTQRSIASHGAL 749

Query: 684 AILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKN 743
           A+L+GRHS+H+IKK EVLLGRATEDV+VDIDLGREG  NKISRRQA+I +D+ G F LKN
Sbjct: 750 AVLHGRHSRHFIKKSEVLLGRATEDVIVDIDLGREGSGNKISRRQAIIKIDQDGFFSLKN 809

Query: 744 LGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCVKRYLDSIMKENRTHEHQ 803
           LGKC I +N+K+V P     L S C+IEIR + FIFE+NQTC+K+YLD+I K +   E Q
Sbjct: 810 LGKCSISINSKDVAPGHCLRLNSGCIIEIRAMRFIFESNQTCMKQYLDNIGKMSHKQEFQ 869

Query: 804 S 804
           S
Sbjct: 870 S 870

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509648|ref|XP_003523558.1| PREDICTED: uncharacterized protein LOC100786493 [Glycine max]

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 330/839 (39%), Positives = 457/839 (54%), Gaps = 106/839 (12%)

Query: 1   MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFL 60
           M  +E SA  LP  F R G+ KE K+ S  RK+ESVR+ YYA  KRI N    S+DLSFL
Sbjct: 68  MTNFELSASPLPSKFYRFGHLKERKVVSATRKSESVRNLYYARCKRIRNSMLTSMDLSFL 127

Query: 61  NAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPT 120
               N N+  +G +P S NCM     +NHF    S+LD     FP+  MDD+ +  D   
Sbjct: 128 VDSENGNYAVHGSDPLSGNCMPEGGTSNHF----SSLDPAQYAFPENLMDDNVAS-DRVA 182

Query: 121 LHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVE-LGLPGQ--VPNLF 177
              F  G D+  EE+F ++   + +E P IFE+N    G    VVE L +P +  +    
Sbjct: 183 AGVFCHGVDNAVEENFPVELKSVLKEEPQIFEDNVPLDG----VVEDLDVPNELAIDGWI 238

Query: 178 EADHMEANPLSTYGQTNDDAGNIC-TLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWT 236
             D +E  PLST    N+D GN+C   + N VF S + +CG  F      S L EMP+W 
Sbjct: 239 GDDGLERMPLSTLDHINNDPGNMCPEFDENNVFDSEL-ECGTSFN----LSSLHEMPVWR 293

Query: 237 TVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDE 296
           T           D+S +E +L                                    CD 
Sbjct: 294 T-----------DESIQEHNL-----------------------------------PCDG 307

Query: 297 LKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGL-SLLLNSPNEAKH 355
             +  +  + YLEELSNSLL+F+++EE + MDVDG E IDKSY+DGL SLL NS N+   
Sbjct: 308 FNDPIACGDAYLEELSNSLLHFSSEEEQILMDVDGDEGIDKSYFDGLTSLLQNSTNDINS 367

Query: 356 DHLPSPEPETSVTPD--YLANASAACPVESVEN---------------VQLPSPATVSDP 398
           D +   +   S+     ++ N S +C  E  +N                Q+ S  + +DP
Sbjct: 368 DQISKKDETESLMASQAHVINQSVSCHKELDDNSGSSSRGLQVVHKLEFQMSSSVSTTDP 427

Query: 399 QFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDF 458
           QFPE  +  M C++NTE  EIP NDD FLP ++ P     + +  FK +  P SSSV   
Sbjct: 428 QFPELINESMPCSINTEHQEIPENDDVFLPFDVPPVIFPPSSKLIFKVSNKPISSSVIKH 487

Query: 459 SGNQKVSDQVLMQGG-------STQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQLAA 511
             +++    + ++         S QM+ S   PG     PVG S VK EL + +++   +
Sbjct: 488 RASERGKTLMHVEKKNPAAPYVSFQMMESPCFPG-----PVGGSKVKCELPANHAAHTVS 542

Query: 512 GTS--CRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNGCK 569
            +S    G +  N    + D+L  A  K++   I + KD  + + +S +KK    S   +
Sbjct: 543 RSSVIVSGGLGGNDAANTTDALLHANKKEEATSICLAKDPSNHVANSFMKKSAADSKDFR 602

Query: 570 SHER-NTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDDDD 628
           +H + N + +K E D P   Q+      E+GS  + ++E + NP   + E+  +ES DD+
Sbjct: 603 NHPQPNGSSMKNEQDLPLPLQDHQLQRAELGSSDVLESELVANPPALDEEEQYIES-DDE 661

Query: 629 VPYFSDIEAMILDMDLDPDD--------QVSKYQHEDTRRAIIRLEQGAHSYMQRAILSH 680
           +P +SD+EAM+LDMDLDP D        +VS+YQH +++RAI+RLEQG+HS +QRAI SH
Sbjct: 662 LPSYSDVEAMVLDMDLDPHDHQDSYYNEEVSRYQHVESKRAIMRLEQGSHSCIQRAIDSH 721

Query: 681 GAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFH 740
           GAFAILY RHSKHYIKKPEVLLGRATE V VDIDLG+ G  N ISRRQA+I M + G+F+
Sbjct: 722 GAFAILYSRHSKHYIKKPEVLLGRATESVPVDIDLGKGGHGNAISRRQAIIKMAKDGTFY 781

Query: 741 LKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCVKRYLDSIMKENRT 799
           +KN GK  ILVN+KEV   QSQ L S+CL+E+RG+  IFE NQ+ VK+YLD I   ++T
Sbjct: 782 IKNFGKSSILVNSKEVHTGQSQRLHSNCLVEVRGMPLIFEINQSRVKQYLDYISDHSQT 840

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518000|ref|XP_003527672.1| PREDICTED: uncharacterized protein LOC100803683 [Glycine max]

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 324/835 (38%), Positives = 445/835 (53%), Gaps = 110/835 (13%)

Query: 1   MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFL 60
           M   E SAL LP  F R G+SKE K+ S  RK++SVR+ YYA RKRI N    S+DLSFL
Sbjct: 68  MTNLELSALPLPSKFYRFGHSKERKVVSATRKSDSVRNLYYARRKRIRNSMLTSMDLSFL 127

Query: 61  NAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPT 120
               N N+  +G +P S NCM     +NHF    S+LD     FP+  MDD+ +  D   
Sbjct: 128 VDSENGNYAAHGSDPLSGNCMPEGGTSNHF----SSLDPSQYAFPENVMDDNVAS-DRVA 182

Query: 121 LHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVE-LGLPGQ--VPNLF 177
              F  G D    E+F  +   + +E P IFE N    G    VVE L +P +  +    
Sbjct: 183 AGVFCHGVDKAVAENFPAKLKSVLKEEPQIFEGNMPLDG----VVEDLDVPNELAIDGWI 238

Query: 178 EADHMEANPLSTYGQTNDDAGNIC-TLEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWT 236
             D +E  PLS     N+D GN+C   + N VF S + +CG  F      S  PEM +W 
Sbjct: 239 GDDGLERMPLSALNHINNDPGNMCPEFDENNVFDSEL-ECGTSFN----LSSRPEMSVWG 293

Query: 237 TVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDE 296
           T           D+S +E DL                                    CD 
Sbjct: 294 T-----------DESIQEHDL-----------------------------------PCDG 307

Query: 297 LKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGL-SLLLNSPNEAKH 355
             +  +  + YLEELSNSLL+F+++EE + MDVDG+E I+KSY+ GL SLL NS N+   
Sbjct: 308 FSDPIACGDAYLEELSNSLLHFSSEEEQILMDVDGEEGIEKSYFGGLTSLLQNSTNDVNS 367

Query: 356 DHLPSPEPETSVTPD--YLANASAACPVESVENV---------------QLPSPATVSDP 398
           D +   +   S+     ++ N S +C  E  +N+               Q+ S    +DP
Sbjct: 368 DQISEKDETESLMASQAHVINQSVSCHKELDDNLGSSSSGLQVVPKLEFQMSSSVAATDP 427

Query: 399 QFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDF 458
           QFP+  +  M C++NTE  EIP NDD FLP ++ P     + +  FK +  P SSSV   
Sbjct: 428 QFPDLINESMSCSINTEHQEIPENDDVFLPFDVPPVIFPPSSKLIFKVSNKPISSSVIKH 487

Query: 459 SGNQKVSDQVLMQ---------GGSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQL 509
             +++   + LM            S QM+ S   PG     PVG S V+ EL + ++   
Sbjct: 488 RDSER--GKTLMHVEKKDSVESHASFQMMESPCFPG-----PVGGSKVECELPANHAPHT 540

Query: 510 AAGTS--CRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNG 567
            + +S    G +  N    + D+   A  K++   + + KD  + + +S +KK    S  
Sbjct: 541 VSRSSVTVSGGLGGNEAANTTDAFLHANKKEEATNVGLAKDPNNHVANSFMKKSAVDSKD 600

Query: 568 CKSHER-NTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDD 626
            ++H + N   +K E D     Q+      E+GS  + ++E + NP T + E+  +ES D
Sbjct: 601 FRNHPQPNGFSMKTEQDLALPLQDYQLQRAELGSSDVLESELVANPPTLDEEEQYIES-D 659

Query: 627 DDVPYFSDIEAMILD--------MDLDPDDQVSKYQHEDTRRAIIRLEQGAHSYMQRAIL 678
           +++P +SD+EAM+LD         D   +++VS+YQH +++RAI+RLE GAHS +QRAI 
Sbjct: 660 EELPSYSDVEAMLLDMDLDPDDHQDSYYNEEVSRYQHVESKRAIMRLELGAHSCIQRAID 719

Query: 679 SHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGS 738
           SHGAFAILY RHSKHYIKKPEVLLGRATE V VDIDLG+ G  N ISRRQA+I MD+ GS
Sbjct: 720 SHGAFAILYSRHSKHYIKKPEVLLGRATEGVPVDIDLGKGGHGNAISRRQAIIKMDKDGS 779

Query: 739 FHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCVKRYLDSI 793
           F++KNLGK PILVNNKEV   QSQ L S CLIE+RG+  IFE NQ+ VK+Y+D I
Sbjct: 780 FYIKNLGKSPILVNNKEVHTGQSQRLHSDCLIEVRGMPLIFEINQSRVKQYVDHI 834

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357466877|ref|XP_003603723.1| Microspherule protein [Medicago truncatula] gi|355492771|gb|AES73974.1| Microspherule protein [Medicago truncatula]

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 314/854 (36%), Positives = 442/854 (51%), Gaps = 149/854 (17%)

Query: 3   EYERSALTLPKVFSRAGNSK-EIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFLN 61
           ++E S   LP  F +  + K E K  S KRK  +VR+ YYA+RKRI  +   S+D +FL 
Sbjct: 73  DFEHSVSPLPSKFFKIEHLKDEQKDVSVKRKVHTVRNSYYAMRKRIRRDMQTSMDYNFLV 132

Query: 62  APGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPTL 121
              N N+  NG+EP   NC+L    +N F    SN D  H   P+  MD D     G   
Sbjct: 133 DSENDNYAVNGNEPLPENCVLEGSTSNDF----SNHDPSHYGLPENFMDVDI----GVAA 184

Query: 122 HRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARV---VELGLPGQVPNLFE 178
             F+ G D   EE+F M Q  + EE P I E+N    G        +EL     +     
Sbjct: 185 QAFYTGVDDTLEENFPMDQNNISEEEPQIHEDNVLLNGTAEEFGDSIEL----DIEKFIG 240

Query: 179 ADHMEANPLSTYGQTNDDAGNICT-LEGNQVFRSPIPDCGAPFQDLEFSSP-LPEMPIWT 236
            D ++    S + Q N+D  N+C+  + + +F SP  +CG  F DLE S P + +MP+W 
Sbjct: 241 DDELDDMSFSAFHQINNDPANLCSEFDEDYMFDSPELECGNSFDDLELSLPDIQDMPVWR 300

Query: 237 TVEDSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDE 296
           T E  + P                         G+KD                  ++C+ 
Sbjct: 301 TEEQDNIPC-----------------------DGSKDS-----------------IACE- 319

Query: 297 LKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGL-SLLLNSPNEAKH 355
                   +GYLEELSNSLLNFT +EE   MD  GK+ I KSYYDGL SLLLNSP +   
Sbjct: 320 --------DGYLEELSNSLLNFTGEEELFLMDSVGKDGIGKSYYDGLSSLLLNSPIDGCS 371

Query: 356 DHLP-SPEPETSVTP-DYLANASAACPVESVENV-------------------------- 387
           + +P + E E  +TP + + N S +C  E  +N                           
Sbjct: 372 NQIPETAEVELLLTPHEDVKNPSVSCRTEVDDNAGKAETELLAAFDAHVKGMSVSCRAEV 431

Query: 388 -------------------QLPSPATVSDPQFPEQNDGIMICTLNTEDPEIPCNDDAFLP 428
                              Q+ + A+  DPQFPE  +G++ C +NTEDPE+P NDD FLP
Sbjct: 432 DDNTMSQSNGMEVVQKPEFQMAASASAKDPQFPELINGVVPCIINTEDPEVPSNDDVFLP 491

Query: 429 NNLLPSSVSIAKRQNFKDAGNPFSSSVKDFSGNQKVSDQVLMQGGSTQMVGSQVIPGSHK 488
            N  P ++S +     +          K   G Q           S+Q  G+  +PG   
Sbjct: 492 FNEPPPTISCSSESASRRGKVLMQVEQKSSVGAQV----------SSQTTGAHCLPG--- 538

Query: 489 HHPVGDSGVKFEL------HSCNSSQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKE 542
             PV  S +K+EL      H  + + + A +   G+  N++ N +  +L  A  K+   +
Sbjct: 539 --PVSGSKIKYELSNNHASHRLSRNAIIASSDLGGN--NDATNKTHAALH-ASPKEKPVD 593

Query: 543 IAMVKDLGHTLTDSSLKKPNFVSNGCKSHER-NTNGVKQELDYPAITQESHALNVEVGSL 601
           ++ VK   + +T+ S KKP  + NG ++H + N + +KQE D     + +   + EVGS 
Sbjct: 594 VSFVKHQSNNVTNLSHKKPA-LGNGLRNHGQPNGSSLKQERDVALPVENNQLQHAEVGSA 652

Query: 602 HIPDAEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDLDPDD-------QVSKYQ 654
            +   E ++     + E+  +ES DD+VPY+SD+EAM+LDMDL+PDD       +VS+YQ
Sbjct: 653 DVLGPEMVVYSERLDEEEQYIES-DDEVPYYSDVEAMVLDMDLEPDDHDLYDNEEVSRYQ 711

Query: 655 HEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDID 714
           HE+T+RAIIRLEQGAHSYMQRA+ SHGA A+LYGRHSK+YIKK EVL+GR+TE   VDID
Sbjct: 712 HEETKRAIIRLEQGAHSYMQRAMASHGALALLYGRHSKYYIKKTEVLVGRSTEGFHVDID 771

Query: 715 LGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRG 774
           LG+ G  N ISRRQA+I MD+ GSF +KN+G+  +L+N+ E+   QSQ L S+ LIE++G
Sbjct: 772 LGKGGCANLISRRQAIIKMDKDGSFFIKNIGRSSMLINSTELHTGQSQRLLSNYLIELKG 831

Query: 775 LAFIFETNQTCVKR 788
             FIFE NQ+ +KR
Sbjct: 832 TQFIFEINQSGMKR 845

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082944|ref|XP_002306902.1| predicted protein [Populus trichocarpa] gi|222856351|gb|EEE93898.1| predicted protein [Populus trichocarpa]

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 260/543 (47%), Positives = 336/543 (61%), Gaps = 58/543 (10%)

Query: 279 YDFVHGNSKLKMQMSCDELKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKS 338
           YD +H +SKL+M+M  D  +N + +TE +L EL+N L   +NDEE   +DVDGK+     
Sbjct: 228 YDDLHEDSKLQMEMLTDVPQNSSHSTEDFLAELTNYL---SNDEEGSGVDVDGKDFSTDP 284

Query: 339 YYDGL-SLLLNSPNEAKHDHLPS-PEPETSVTPDYLANASAACPVESVENVQLPSPATVS 396
           Y   L ++LL+SPN     H+PS  EPE+S++ D+   +  +  V     +Q  S  +V 
Sbjct: 285 YIACLNTILLSSPNSENEKHMPSVTEPESSISADW---SHYSVDVVCNSEMQFVSSTSVL 341

Query: 397 DPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVK 456
           DP  PE  DG++ C LN+ED EIPCN D   P    PSS +    ++ +DAG P S  VK
Sbjct: 342 DPH-PEVKDGVICCVLNSEDTEIPCNGDILFPTEWHPSSAASLASRSSQDAGKPNSLFVK 400

Query: 457 DFSGNQKVSDQVLMQ---------GGSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSS 507
           +   N+K    V++            S+QM   QV+P     HP GD  +KFEL S  ++
Sbjct: 401 ELISNKKSGVPVVVHRDLDNPRQPRASSQMTRLQVMPERGLLHPAGDHVLKFELPSSEAT 460

Query: 508 -QLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSN 566
            +  AG S  GS Q NS +T  ++L                            K +FVS+
Sbjct: 461 HRGGAGFSSGGSTQFNSADTEMETL----------------------------KLDFVSD 492

Query: 567 GCKSHERNTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDD 626
                + N + VKQ  D PA  Q   A +++VGS  I  +E + N S ++P +P ++S D
Sbjct: 493 CFTYPQTNVSAVKQAEDAPAGVQNHQASHMKVGSSDIAASELVENHSISDPAEPPIQS-D 551

Query: 627 DDVPYFSDIEAMILDMDLDPDDQ-------VSKYQHEDTRRAIIRLEQGAHSYMQRAILS 679
           DDVPYFSDIEAMILDMDLDP DQ       VS+YQHED +RAIIRLEQGA SYMQR+I S
Sbjct: 552 DDVPYFSDIEAMILDMDLDPQDQDLYCSEEVSRYQHEDMKRAIIRLEQGARSYMQRSIAS 611

Query: 680 HGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSF 739
           HGAFA++YGRHSKHYIKKPEVLLGRATEDV VDIDLGREGR NKISRRQA I +D++GSF
Sbjct: 612 HGAFAVMYGRHSKHYIKKPEVLLGRATEDVTVDIDLGREGRANKISRRQATIYLDKSGSF 671

Query: 740 HLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCVKRYLDSIMKENRT 799
           +LKNLGKC + VN+KE+ P +S  L S CLIEIRG+ FIFE NQTCVK+YL    ++N+T
Sbjct: 672 YLKNLGKCSLSVNDKEIAPGRSLSLSSGCLIEIRGMPFIFEINQTCVKQYL---AQKNQT 728

Query: 800 HEH 802
            EH
Sbjct: 729 QEH 731

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735058|emb|CBI17420.3| unnamed protein product [Vitis vinifera]

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 313/838 (37%), Positives = 419/838 (50%), Gaps = 140/838 (16%)

Query: 1   MFEYERSALTLPKVFSRAGNSKEIKLSSGKRKAESVRSCYYALRKRIHNEPFNSIDLSFL 60
           M ++E SA       +R+GN KE     GKRK ES+R  Y+A+RKRIHN P  + D    
Sbjct: 70  MVQFEPSASNYSFKSNRSGNCKENVEVLGKRKVESIRRKYHAMRKRIHNVP--NADGYMC 127

Query: 61  NAPGNRNFYGNGDEPPSRNCMLGDPMANHFGLQDSNLDVMHRKFPDIPMDDDASCRDGPT 120
           N  G        +EPP  +  LGD + +HFGLQD           ++P D          
Sbjct: 128 NGGGCEEHIVLDNEPPVGSYALGDRVLSHFGLQD-----------NVPQD---------- 166

Query: 121 LHRFHGGFDHPGEEDFSMQQGEMHEEIPHIFEENQSFRGNGARVVELGLPGQVPNLFEAD 180
                                     IPHI  +N    GN +   + GLP +  NLF  +
Sbjct: 167 --------------------------IPHIIGDNLVDFGNCSGFEDRGLPDR--NLFNNN 198

Query: 181 HMEANPLSTYGQTNDDAGNICT-LEGNQVFRSPIPDCGAPFQDLEFSSPLPEMPIWTTVE 239
             E  PLST    N + GN+ +   G Q   SP+ D  A    + F SPLP +P+W T+E
Sbjct: 199 DFERKPLSTLDSLNTNLGNVGSEFGGGQHCESPVSDGSASLHQMGFPSPLPRVPLWKTIE 258

Query: 240 DSSSPTITVDDSFREKDLHSGDNYALPDDSGAKDKSAPGYDFVHGNSKLKMQMSCDELKN 299
           D S+P + ++ +  ++ + + +   L   +      + GY  VH    LK   +C  L N
Sbjct: 259 DISAPVMPINVNLGDRTVSAEETLTLAAAADGNKPCSSGY-AVHSQPTLKD--TCVGLNN 315

Query: 300 EASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGL-SLLLNSPNEAKHDHL 358
             + T+G   +LS+SLLNF+++ E LFM+ DGK+ +DKS  D L S+LL+SPNE   D +
Sbjct: 316 STAITDGEFADLSDSLLNFSDENELLFMEADGKDPMDKSCLDNLDSVLLSSPNEVHVDDM 375

Query: 359 PS-PEPETSVTPDYLANASAACPVESV-----------------ENVQLPSPATVSDPQF 400
            +  +PET ++   +    +ACP E V                   V +PS   +S+P  
Sbjct: 376 ANISDPETLISGTSIVIHGSACPAELVVSADPLQSSHSNQEGVHSEVTMPSSTLISNPHS 435

Query: 401 PEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNP-FSSSVKDFS 459
            E  +G+M CTLNTED EIP NDD FLP     ++  I     F++A  P FSS +    
Sbjct: 436 SELQEGVMYCTLNTEDSEIPYNDDNFLPATFASTTQPI-----FEEACEPAFSSDI---- 486

Query: 460 GNQKVSDQV--LMQG--------GSTQMVGSQVIPGSHKHHPVGDSGVKFELHSCNSSQL 509
             QK S+Q   LM           + QM+G   +P     H     G + EL        
Sbjct: 487 --QKDSEQAPSLMNKDKNPAPSFKAPQMIGKDRMPEIVPDHQFIGYGNRSEL-------- 536

Query: 510 AAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSNGCK 569
            +G +C                  A   +    I +V     +   S+   PN V +G  
Sbjct: 537 -SGDNC-----------------LATASRHFNSIPVVP----SHHSSAHATPNSVMDGAP 574

Query: 570 SHERNTNGVK-QELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDDDD 628
              R    VK +E + P    E   L+   GS  +   EPI +  + + E  S    DDD
Sbjct: 575 G--RGVLNVKSREKEAPGTYGEHLFLHAGSGSTKMNFLEPINSLMSDQEESES----DDD 628

Query: 629 VPYFSDIEAMILDMDLDPDDQ-------VSKYQHEDTRRAIIRLEQGAHSYMQRAILSHG 681
           VPYFSDIEAMIL+MDL P+DQ       VS+YQHED R+ IIRLEQ A S MQRAI S  
Sbjct: 629 VPYFSDIEAMILEMDLCPEDQDSYIGSKVSRYQHEDARKVIIRLEQCAQSSMQRAIASQC 688

Query: 682 AFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHL 741
           A AI YGRH KHYIKK EV+LGRAT ++ VDIDL +EGR NKISRRQA+I M   GSF L
Sbjct: 689 ALAIFYGRHLKHYIKKAEVILGRATNEIDVDIDLSKEGRANKISRRQAIIRMQGDGSFLL 748

Query: 742 KNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCVKRYLDSIMKENRT 799
           KNLGK  IL+N +EV   Q  GL SS LIEIRG+ F+FE NQ  V+RYL ++ K+ + 
Sbjct: 749 KNLGKNVILLNGQEVATGQVGGLSSSSLIEIRGMRFVFEVNQKSVRRYLANVAKKGQV 806

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066050|ref|XP_002302003.1| predicted protein [Populus trichocarpa] gi|222843729|gb|EEE81276.1| predicted protein [Populus trichocarpa]

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 250/536 (46%), Positives = 327/536 (61%), Gaps = 48/536 (8%)

Query: 279 YDFVHGNSKLKMQMSCDELKNEASNTEGYLEELSNSLLNFTNDEEFLFMDVDGKEMIDKS 338
           +D +  +S+LKM++  D  +N + +TE +L EL+N L   +NDEE   +D+DGK+    S
Sbjct: 227 FDDLQKDSELKMEILSDVPQNSSHSTEDFLAELTNYL---SNDEEGASVDMDGKDFSTNS 283

Query: 339 YYDGL-SLLLNSPNEAKHDHLPS-PEPETSVTPDYLANASAACPVESVENVQLPSPATVS 396
           Y   L ++LL+SPN +  +H P+  EPE S++ D   N S ACP    EN    S  +V 
Sbjct: 284 YIACLNTILLDSPNNSNENHRPNVTEPEASISADCSKNHSGACPGNLWEN--RGSHCSVD 341

Query: 397 DPQFPEQNDGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVK 456
               PE  DGI+ C LNTED EIP NDD  LP +  P SV+   ++NF+ AG P S S K
Sbjct: 342 ADPHPEVKDGIICCVLNTEDTEIPFNDDIDLPTDWRPRSVTSLVQRNFQHAGKPNSLSAK 401

Query: 457 DFSGNQ------KVSDQVLMQGG----STQMVGSQVIPGSHKHHPVGDSGVKFELHSCNS 506
           +   N+       V+ + L   G    S+QMV  Q +P     HPVGD  +K EL S +S
Sbjct: 402 ELPSNKIGSVVSVVAHRDLENPGQLLASSQMVRLQAMPEPGPVHPVGDHSLKLELPSSDS 461

Query: 507 SQLAAGTSCRGSIQNNSMNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFVSN 566
           ++ +AG +  GS Q NS +T  ++L   +LK++  E  M K + +   DS L+KP+ VS+
Sbjct: 462 TRRSAGFAFGGSTQFNSADTKMETLVPTKLKEETTETPMAKHMSNESADSLLEKPSLVSD 521

Query: 567 GCKSHERNTNGVKQELDYPAITQESHALNVEVGSLHIPDAEPIMNPSTTEPEDPSVESDD 626
                + N + +KQ  D P   Q                             +  V   D
Sbjct: 522 FFTYPQTNVSAIKQVEDAPDRVQ-----------------------------NHQVSHSD 552

Query: 627 DDVPYFSDIEAMILDMDLDPDDQVSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAIL 686
           DDVPYFSDIEAM+    +  D  VS+Y+HEDT+RAI+RLEQGAHSYMQRAI  HGAFA++
Sbjct: 553 DDVPYFSDIEAMVTVYCIQTD--VSRYRHEDTKRAIMRLEQGAHSYMQRAIARHGAFAVI 610

Query: 687 YGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGK 746
           +GRHSKHYIKK EVLLGRATED +VDIDLGREGR N ISRRQA IN+D++GSF+LKNLGK
Sbjct: 611 HGRHSKHYIKKSEVLLGRATEDAIVDIDLGREGRRNIISRRQATINLDKSGSFYLKNLGK 670

Query: 747 CPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCVKRYLDSIMKENRTHEH 802
           C + VN+KE+ P QS  L S CLIEIRG+ FIFE NQTCVK YL    +EN+T EH
Sbjct: 671 CSLSVNDKEIAPGQSLSLTSGCLIEIRGMPFIFEINQTCVKHYLARKTQENQTWEH 726

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	804
TAIR|locus:2096174	702	emb1967 "AT3G54350" [Arabidops	0.593	0.679	0.433	4.3e-111
TAIR|locus:2005644	555	AT1G75530 "AT1G75530" [Arabido	0.202	0.293	0.576	5.7e-51
TAIR|locus:2036621	525	AT1G60700 "AT1G60700" [Arabido	0.195	0.299	0.447	3.2e-27
UNIPROTKB|E2R2M5	271	MCRS1 "Uncharacterized protein	0.192	0.571	0.331	2.4e-14
UNIPROTKB|Q7Z372	271	DKFZp686N07218 "Putative uncha	0.192	0.571	0.331	2.4e-14
RGD|1311607	462	Mcrs1 "microspherule protein 1	0.192	0.335	0.331	1.1e-12
MGI|MGI:1858420	462	Mcrs1 "microspherule protein 1	0.192	0.335	0.337	1.8e-12
UNIPROTKB|Q08E44	462	MCRS1 "Uncharacterized protein	0.192	0.335	0.331	2.3e-12
UNIPROTKB|Q96EZ8	462	MCRS1 "Microspherule protein 1	0.192	0.335	0.331	2.3e-12
UNIPROTKB|G3V9E0	462	Mcrs1 "Protein Mcrs1" [Rattus	0.192	0.335	0.331	2.3e-12

TAIR|locus:2096174 emb1967 "AT3G54350" [Arabidopsis thaliana (taxid:3702)]

 Score = 896 (320.5 bits), Expect = 4.3e-111, Sum P(2) = 4.3e-111
 Identities = 227/524 (43%), Positives = 305/524 (58%)

Query:   291 QMSCDELKNEASNTEG---YLEELSNSLLNFTNDEEFLFMDVDGKEMIDKSYYDGLS-LL 346
             +   +   +EA NT     +L +LS SL  F  D E  FM+VDGKE +DKSYYDGLS LL
Sbjct:   209 EQKLENTAHEAKNTMASTDFLAQLSTSL--FEEDME-PFMEVDGKE-VDKSYYDGLSSLL 264

Query:   347 LNSPNEAKHDHLPSP-EPETSVTPDYLANASAACPVESVENVQLPSPATVS-DPQFPEQN 404
             +NS N+   +  P+P E E S+ P +   A+        ++V L    T++ DP  PE  
Sbjct:   265 VNSTNDTNREAFPNPTEQEPSIAPTHPGEATLD------DHVMLELDGTIALDPH-PEIV 317

Query:   405 DGIMICTLNTEDPEIPCNDDAFLPNNLLPSSVSIAKRQNFKDAGNPFSSSVKDFSGNQKV 464
              G++ C LN EDP+IPCNDD FL NN  P SVS   R+NFKD  +P ++ V+D S +++ 
Sbjct:   318 GGVICCLLNEEDPDIPCNDDIFLSNNSRPMSVSSLARRNFKDTNSPITTCVRDVSASKEK 377

Query:   465 SDQVLMQGGSTQMVGSQVIPGSHKHHP-VGDSGVKFELHSCNSSQLAAGTSCRGSIQNNS 523
             S+   +Q    +  G   + GS +  P +G      +  +  S++L    +  GS  +++
Sbjct:   378 SEGYSLQA-QKKKPGR--LQGSTQGKPEMGQPSKGSKFRASTSTELKNTVAPGGS--SSA 432

Query:   524 MNTSKDSLQCARLKQDNKEIAMVKDLGHTLTDSSLKKPNFV-SNGCKSH-ERNTNGVKQE 581
                S   L      +D K+         T T +      FV S+G  +H E+++   K++
Sbjct:   433 QACSNTLLSTGTGAKDGKK--------ETATGTL-----FVGSDGHGNHPEKDSENCKEK 479

Query:   582 LDYPAITQESHALNVEVGSLHI--PDAEPIMNPSTTXXXXXXXXXXXXXXXYFSDIEAMI 639
                P + +  HA + + G + I  P+ E I                      +SDIEAMI
Sbjct:   480 NVVPPVNESPHAKDTDDGLIEITVPELE-ITRAEAEAEAEAHVCESDEDLPNYSDIEAMI 538

Query:   640 LDMDLDPDDQ------VSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKH 693
             LDMDL+PDDQ      VSKYQ +D +R IIRLEQ AHSYMQRAI S GAFA+LYGR+SKH
Sbjct:   539 LDMDLEPDDQDNFDLEVSKYQSQDMKRTIIRLEQAAHSYMQRAIASRGAFAVLYGRYSKH 598

Query:   694 YIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNN 753
             YIKKPEVL+GR+TED+ VDIDLGRE R +KISRRQA+I + + GSFH+KNLGK  I VN 
Sbjct:   599 YIKKPEVLVGRSTEDLAVDIDLGREKRGSKISRRQAIIRLGDDGSFHIKNLGKYSISVNE 658

Query:   754 KEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCVKRYLDSIMKEN 797
             KEV P QS  L S CL+EIRG+ FIFETNQ+C++ YL    K N
Sbjct:   659 KEVDPGQSLILKSDCLVEIRGMPFIFETNQSCMQEYLKRRGKVN 702

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0006312 "mitotic recombination" evidence=RCA

GO:0006346 "methylation-dependent chromatin silencing" evidence=RCA

GO:0009560 "embryo sac egg cell differentiation" evidence=RCA

GO:0009630 "gravitropism" evidence=RCA

GO:0016246 "RNA interference" evidence=RCA

TAIR|locus:2005644 AT1G75530 "AT1G75530" [Arabidopsis thaliana (taxid:3702)]

 Score = 457 (165.9 bits), Expect = 5.7e-51, Sum P(3) = 5.7e-51
 Identities = 98/170 (57%), Positives = 122/170 (71%)

Query:   632 FSDIEAMILDMDLDP--DDQ----VSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAI 685
             FSD+EAMILDMDL+P   DQ     SKY++E+  R I+RLEQ A SYM R I +HGAFA+
Sbjct:   387 FSDLEAMILDMDLEPIGQDQYELDASKYRNEEMARKIMRLEQSAESYMNRDIAAHGAFAL 446

Query:   686 LYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLG 745
             LYG  SKHYI KPEVLLGRAT +  VDIDLGR G   + SRRQA+I + + GSF +KNLG
Sbjct:   447 LYGS-SKHYINKPEVLLGRATGEYPVDIDLGRSGSETRFSRRQALIKLKQDGSFEIKNLG 505

Query:   746 KCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCVKRYLDSIMK 795
             K  I +N++E+   +   L ++CLI+IR  +FIFE N+  VKRYLD I K
Sbjct:   506 KFSIWMNDEEINHGEVVILKNNCLIQIREKSFIFEKNEKAVKRYLDGIHK 555

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2036621 AT1G60700 "AT1G60700" [Arabidopsis thaliana (taxid:3702)]

 Score = 325 (119.5 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
 Identities = 73/163 (44%), Positives = 105/163 (64%)

Query:   634 DIEAMILDMDLDPDDQVSKYQHED------TRRAIIRLEQGAHSYMQRAILSHGAFAILY 687
             DI+AMI  ++L PDD  S +  E+       R A+I LEQ   + MQRAI+ HGA A+L+
Sbjct:   345 DIDAMIRKLNLVPDDSDSCFNREEWNMSKHPRHALIGLEQCTRTSMQRAIMFHGAIAVLH 404

Query:   688 GRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKC 747
                SKH+++K EV++GR++  + VDIDLG+    +KISRRQA++ ++  GSF LKNLGK 
Sbjct:   405 CPDSKHFVRKREVIIGRSSGGLNVDIDLGKYNYGSKISRRQALVKLENYGSFSLKNLGKQ 464

Query:   748 PILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCVKRYL 790
              ILVN  ++   Q   L S   I IRG+ F+F+ N+  V ++L
Sbjct:   465 HILVNGGKLDRGQIVTLTSCSSINIRGITFVFKINKEAVGQFL 507

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E2R2M5 MCRS1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 198 (74.8 bits), Expect = 2.4e-14, P = 2.4e-14
 Identities = 56/169 (33%), Positives = 87/169 (51%)

Query:   632 FSDIEAMILDMDL-DPDDQVSKYQHE--DTR--RAIIRLEQGAHSY---------MQRAI 677
             FSD E +I D  L D  D+V +++    D R  R I +LEQ  H +         M    
Sbjct:    90 FSDAEDLIDDSKLKDMRDEVLEHELTVADRRQKREIRQLEQELHKWQVLVDSITGMSSPD 149

Query:   678 LSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAG 737
               +   A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q +I +   G
Sbjct:   150 FDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNG 209

Query:   738 SFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCV 786
              F + N G+ PI ++ + V       L ++ ++EI  L F+F  NQ  +
Sbjct:   210 DFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLI 258

GO:0071339 "MLL1 complex" evidence=IEA

GO:0046972 "histone acetyltransferase activity (H4-K16 specific)" evidence=IEA

GO:0043996 "histone acetyltransferase activity (H4-K8 specific)" evidence=IEA

GO:0043995 "histone acetyltransferase activity (H4-K5 specific)" evidence=IEA

GO:0031011 "Ino80 complex" evidence=IEA

GO:0000123 "histone acetyltransferase complex" evidence=IEA

UNIPROTKB|Q7Z372 DKFZp686N07218 "Putative uncharacterized protein DKFZp686N07218" [Homo sapiens (taxid:9606)]

 Score = 198 (74.8 bits), Expect = 2.4e-14, P = 2.4e-14
 Identities = 56/169 (33%), Positives = 87/169 (51%)

Query:   632 FSDIEAMILDMDL-DPDDQVSKYQH--EDTR--RAIIRLEQGAHSY---------MQRAI 677
             FSD E +I D  L D  D+V +++    D R  R I +LEQ  H +         M    
Sbjct:    90 FSDAEDLIDDSKLKDMRDEVLEHELMVADRRQKREIRQLEQELHKWQVLVDSITGMSSPD 149

Query:   678 LSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAG 737
               +   A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q +I +   G
Sbjct:   150 FDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNG 209

Query:   738 SFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCV 786
              F + N G+ PI ++ + V       L ++ ++EI  L F+F  NQ  +
Sbjct:   210 DFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLI 258

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

RGD|1311607 Mcrs1 "microspherule protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 201 (75.8 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 56/169 (33%), Positives = 88/169 (52%)

Query:   632 FSDIEAMILDMDL-DPDDQVSKYQHE--DTR--RAIIRLEQGAHSY---------MQRAI 677
             FSD E +I D +L D  D+V +++    D R  R I +LEQ  H +         M    
Sbjct:   281 FSDAEDLIDDSELKDMRDEVLEHELTVADRRQKREIRQLEQELHKWQVLVDSITGMSSPD 340

Query:   678 LSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAG 737
               +   A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q +I +   G
Sbjct:   341 FDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNG 400

Query:   738 SFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCV 786
              F + N G+ PI ++ + V       L ++ ++EI  L F+F  NQ  +
Sbjct:   401 DFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLI 449

GO:0000123 "histone acetyltransferase complex" evidence=ISO

GO:0005634 "nucleus" evidence=ISO

GO:0031011 "Ino80 complex" evidence=ISO

GO:0043981 "histone H4-K5 acetylation" evidence=ISO

GO:0043982 "histone H4-K8 acetylation" evidence=ISO

GO:0043984 "histone H4-K16 acetylation" evidence=ISO

GO:0071339 "MLL1 complex" evidence=ISO

GO:0005730 "nucleolus" evidence=ISO

GO:0043995 "histone acetyltransferase activity (H4-K5 specific)" evidence=ISO

GO:0043996 "histone acetyltransferase activity (H4-K8 specific)" evidence=ISO

GO:0046972 "histone acetyltransferase activity (H4-K16 specific)" evidence=ISO

MGI|MGI:1858420 Mcrs1 "microspherule protein 1" [Mus musculus (taxid:10090)]

 Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
 Identities = 57/169 (33%), Positives = 90/169 (53%)

Query:   632 FSDIEAMILDMDL-DPDDQVSKYQHE--DTR--RAIIRLEQGAHSY--MQRAILSHGA-- 682
             FSD E +I D  L D  D+V +++    D R  R I +LEQ  H +  +  +I   G+  
Sbjct:   281 FSDAEDLIDDSKLKDMRDEVLEHELTVADRRQKREIRQLEQELHKWQVLVDSITGMGSPD 340

Query:   683 -----FAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAG 737
                   A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q +I +   G
Sbjct:   341 FDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNG 400

Query:   738 SFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCV 786
              F + N G+ PI ++ + V       L ++ ++EI  L F+F  NQ  +
Sbjct:   401 DFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLI 449

GO:0000123 "histone acetyltransferase complex" evidence=ISO

GO:0005634 "nucleus" evidence=IEA

GO:0006281 "DNA repair" evidence=IEA

GO:0006310 "DNA recombination" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0016568 "chromatin modification" evidence=IEA

GO:0031011 "Ino80 complex" evidence=ISO

GO:0043981 "histone H4-K5 acetylation" evidence=ISO

GO:0043982 "histone H4-K8 acetylation" evidence=ISO

GO:0043984 "histone H4-K16 acetylation" evidence=ISO

GO:0071339 "MLL1 complex" evidence=ISO

UNIPROTKB|Q08E44 MCRS1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 198 (74.8 bits), Expect = 2.3e-12, P = 2.3e-12
 Identities = 56/169 (33%), Positives = 87/169 (51%)

Query:   632 FSDIEAMILDMDL-DPDDQVSKYQHE--DTR--RAIIRLEQGAHSY---------MQRAI 677
             FSD E +I D  L D  D+V +++    D R  R I +LEQ  H +         M    
Sbjct:   281 FSDAEDLIDDSKLKDMRDEVLEHELTVADRRQKREIRQLEQELHKWQVLVDSITGMSSPD 340

Query:   678 LSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAG 737
               +   A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q +I +   G
Sbjct:   341 FDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNG 400

Query:   738 SFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCV 786
              F + N G+ PI ++ + V       L ++ ++EI  L F+F  NQ  +
Sbjct:   401 DFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLI 449

GO:0071339 "MLL1 complex" evidence=IEA

GO:0046972 "histone acetyltransferase activity (H4-K16 specific)" evidence=IEA

GO:0043996 "histone acetyltransferase activity (H4-K8 specific)" evidence=IEA

GO:0043995 "histone acetyltransferase activity (H4-K5 specific)" evidence=IEA

GO:0031011 "Ino80 complex" evidence=IEA

GO:0000123 "histone acetyltransferase complex" evidence=IEA

UNIPROTKB|Q96EZ8 MCRS1 "Microspherule protein 1" [Homo sapiens (taxid:9606)]

 Score = 198 (74.8 bits), Expect = 2.3e-12, P = 2.3e-12
 Identities = 56/169 (33%), Positives = 87/169 (51%)

Query:   632 FSDIEAMILDMDL-DPDDQVSKYQH--EDTR--RAIIRLEQGAHSY---------MQRAI 677
             FSD E +I D  L D  D+V +++    D R  R I +LEQ  H +         M    
Sbjct:   281 FSDAEDLIDDSKLKDMRDEVLEHELMVADRRQKREIRQLEQELHKWQVLVDSITGMSSPD 340

Query:   678 LSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAG 737
               +   A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q +I +   G
Sbjct:   341 FDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNG 400

Query:   738 SFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCV 786
              F + N G+ PI ++ + V       L ++ ++EI  L F+F  NQ  +
Sbjct:   401 DFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLI 449

GO:0006281 "DNA repair" evidence=IEA

GO:0006310 "DNA recombination" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0071339 "MLL1 complex" evidence=IDA

GO:0043984 "histone H4-K16 acetylation" evidence=IDA

GO:0046972 "histone acetyltransferase activity (H4-K16 specific)" evidence=IDA

GO:0000123 "histone acetyltransferase complex" evidence=IDA

GO:0043981 "histone H4-K5 acetylation" evidence=IDA

GO:0043995 "histone acetyltransferase activity (H4-K5 specific)" evidence=IDA

GO:0043982 "histone H4-K8 acetylation" evidence=IDA

GO:0043996 "histone acetyltransferase activity (H4-K8 specific)" evidence=IDA

GO:0031011 "Ino80 complex" evidence=IDA

GO:0005654 "nucleoplasm" evidence=TAS

GO:0005737 "cytoplasm" evidence=TAS

GO:0006464 "cellular protein modification process" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|G3V9E0 Mcrs1 "Protein Mcrs1" [Rattus norvegicus (taxid:10116)]

 Score = 198 (74.8 bits), Expect = 2.3e-12, P = 2.3e-12
 Identities = 56/169 (33%), Positives = 87/169 (51%)

Query:   632 FSDIEAMILDMDL-DPDDQVSKYQHE--DTR--RAIIRLEQGAHSY---------MQRAI 677
             FSD E +I D  L D  D+V +++    D R  R I +LEQ  H +         M    
Sbjct:   281 FSDAEDLIDDSKLKDMRDEVLEHELTVADRRQKREIRQLEQELHKWQVLVDSITGMSSPD 340

Query:   678 LSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAG 737
               +   A+L GR  ++ ++  E+ LGRAT+D  +D+DL  EG   KISR+Q +I +   G
Sbjct:   341 FDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNG 400

Query:   738 SFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQTCV 786
              F + N G+ PI ++ + V       L ++ ++EI  L F+F  NQ  +
Sbjct:   401 DFFIANEGRRPIYIDGRPVLCGSKWRLSNNSVVEIASLRFVFLINQDLI 449

GO:0000123 "histone acetyltransferase complex" evidence=IEA

GO:0031011 "Ino80 complex" evidence=IEA

GO:0043995 "histone acetyltransferase activity (H4-K5 specific)" evidence=IEA

GO:0043996 "histone acetyltransferase activity (H4-K8 specific)" evidence=IEA

GO:0046972 "histone acetyltransferase activity (H4-K16 specific)" evidence=IEA

GO:0071339 "MLL1 complex" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	804
cd00060	102	cd00060, FHA, Forkhead associated domain (FHA); fo	1e-05
pfam00498	67	pfam00498, FHA, FHA domain	8e-04

>gnl|CDD|238017 cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 9/89 (10%)

Query: 696 KKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKC-PILVNNK 754
                 +GR +++  + +D         +SRR A+I  D  G   L +LG      VN +
Sbjct: 20  PGGTYTIGRDSDNCDIVLDD------PSVSRRHAVIRYDGDGGVVLIDLGSTNGTFVNGQ 73

Query: 755 EVPPRQSQGLGSSCLIEI--RGLAFIFET 781
            V P +   L    +I +    ++F FE+
Sbjct: 74  RVSPGEPVRLRDGDVIRLGNTSISFRFES 102

Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation). Length = 102

>gnl|CDD|215951 pfam00498, FHA, FHA domain

 Score = 38.0 bits (89), Expect = 8e-04
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 11/75 (14%)

Query: 700 VLLGRATE-DVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKC-PILVNNKEVP 757
           V +GR+ + D+V+D           +SRR A I  D  G F+L++LG      VN + + 
Sbjct: 1   VTIGRSPDCDIVLD--------DPSVSRRHAEIRYDGGGRFYLEDLGSTNGTFVNGQRLG 52

Query: 758 PRQSQGLGSSCLIEI 772
           P   + L    +I +
Sbjct: 53  PEPVR-LRDGDVIRL 66

The FHA (Forkhead-associated) domain is a phosphopeptide binding motif. Length = 67

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	804
KOG2293	547	consensus Daxx-interacting protein MSP58/p78, cont	100.0
cd00060	102	FHA Forkhead associated domain (FHA); found in euk	99.24
PF00498	68	FHA: FHA domain; InterPro: IPR000253 The forkhead-	99.2
PF13325	199	MCRS_N: N-terminal region of micro-spherule protei	99.01
COG5025	610	Transcription factor of the Forkhead/HNF3 family [	98.92
TIGR03354	396	VI_FHA type VI secretion system FHA domain protein	98.59
smart00240	52	FHA Forkhead associated domain. Found in eukaryoti	98.26
COG1716	191	FOG: FHA domain [Signal transduction mechanisms]	98.02
PLN02927	668	antheraxanthin epoxidase/zeaxanthin epoxidase	97.77
COG3456	430	Predicted component of the type VI protein secreti	97.46
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	95.21
KOG0245	1221	consensus Kinesin-like protein [Cytoskeleton]	93.69
KOG1881	793	consensus Anion exchanger adaptor protein Kanadapt	92.25
KOG1882	293	consensus Transcriptional regulator SNIP1, contain	86.69
TIGR02500	410	type_III_yscD type III secretion apparatus protein	86.21

>KOG2293 consensus Daxx-interacting protein MSP58/p78, contains FHA domain [Transcription; Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-51  Score=450.03  Aligned_cols=168  Identities=60%  Similarity=0.891  Sum_probs=162.7

Q ss_pred             CCCCCcCcHHHHHhhCCCCCcch------hhhcccHHHHHHHHHHHhhhhhHhHHhhcCCcceEEEEecceeEEeecCeE
Q 003666          627 DDVPYFSDIEAMILDMDLDPDDQ------VSKYQHEDTRRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEV  700 (804)
Q Consensus       627 d~~psFsD~E~~Ild~dL~P~Dq------vsr~q~~~~kr~IrrLEqe~~s~~~r~i~~~~AlAvL~Gr~~~YyIrs~eV  700 (804)
                      ++++  +|+|+||+|+||.|.||      ++.++.+..++.|.||||.+++||||+|+.+||||+|+|+..+||||++||
T Consensus       373 E~Le--~diEami~D~dl~p~~qd~r~le~e~~r~~~l~~~iirleqs~~~~mqrai~~hgAiAvL~Gr~skh~mrk~EV  450 (547)
T KOG2293|consen  373 EELE--SDIEAMILDMDLEPDDQDIRSLEAEKSRSQVLVRSIIRLEQSAESYMQRAIAFHGAIAVLYGRFSKHYMRKKEV  450 (547)
T ss_pred             cccc--chHHHHHhhcccCCcchHHHHHHHHHhhhHHHHHHhhhhhhcccchhhhhhhhcceeEEEechhhHhhhcCcce
Confidence            5566  99999999999999998      466788899999999999999999999999999999999999999999999


Q ss_pred             EeCCCCCCCCcceecCCCCCCccchhhceeeeecCCCcEEEEecccCCeEECcEEcCCCCccccCCCCeEEEcCeEEEEE
Q 003666          701 LLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRGLAFIFE  780 (804)
Q Consensus       701 tIGR~T~~~~VDIDLs~EGpaskISRrQA~Ikl~~dg~F~L~NlGKngI~VNGk~I~~G~~~~L~sgsLIEIggi~fiFl  780 (804)
                      +|||+|.+..|||||++|||++|||||||+|||..+|+|+|+|+||++|+|||.+|.+|++++|+++|||||.|++|+|+
T Consensus       451 tlGRat~d~~VDIDLgkegpatKISRRQa~IkL~n~GsF~IkNlGK~~I~vng~~l~~gq~~~L~~nclveIrg~~FiF~  530 (547)
T KOG2293|consen  451 TLGRATGDLKVDIDLGKEGPATKISRRQALIKLKNDGSFFIKNLGKRSILVNGGELDRGQKVILKNNCLVEIRGLRFIFE  530 (547)
T ss_pred             EeeccCCCcceeeeccccCccceeeccceeEEeccCCcEEeccCcceeEEeCCccccCCceEEeccCcEEEEccceEEEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eChHhHHHHHhhhhcc
Q 003666          781 TNQTCVKRYLDSIMKE  796 (804)
Q Consensus       781 lN~~~V~~~l~~~~k~  796 (804)
                      +|+++|.+||+++.|.
T Consensus       531 ~N~~~v~~~l~~~~K~  546 (547)
T KOG2293|consen  531 INQEAVGQYLKENAKR  546 (547)
T ss_pred             ecHHHHHHHHHhcccc
Confidence            9999999999999875

>cd00060 FHA Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins

Probab=99.24  E-value=5.7e-11  Score=102.46  Aligned_cols=92  Identities=26%  Similarity=0.445  Sum_probs=80.3

Q ss_pred             eEEEEe--cceeEEeec-CeEEeCCCCCCCCcceecCCCCCCccchhhceeeeecC-CCcEEEEecccCCeEECcEEcCC
Q 003666          683 FAILYG--RHSKHYIKK-PEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDE-AGSFHLKNLGKCPILVNNKEVPP  758 (804)
Q Consensus       683 lAvL~G--r~~~YyIrs-~eVtIGR~T~~~~VDIDLs~EGpaskISRrQA~Ikl~~-dg~F~L~NlGKngI~VNGk~I~~  758 (804)
                      |.++.|  ...+|.|+. .+++|||+...  +||-|.    ...|||+||+|+++. .+.|++.+.++++++|||+++..
T Consensus         4 L~~~~~~~~~~~~~l~~~~~~~iGr~~~~--~~i~l~----~~~iS~~H~~i~~~~~~~~~~~~~~s~~g~~vn~~~~~~   77 (102)
T cd00060           4 LVVLSGDASGRRYYLDPGGTYTIGRDSDN--CDIVLD----DPSVSRRHAVIRYDGDGGVVLIDLGSTNGTFVNGQRVSP   77 (102)
T ss_pred             EEEecCCCceeEEEECCCCeEEECcCCCc--CCEEcC----CCCeeCcceEEEEcCCCCEEEEECCCCCCeEECCEECCC
Confidence            455666  689999999 99999998886  777773    799999999999999 67788888889999999999999


Q ss_pred             CCccccCCCCeEEEc--CeEEEEE
Q 003666          759 RQSQGLGSSCLIEIR--GLAFIFE  780 (804)
Q Consensus       759 G~~~~L~sgsLIEIg--gi~fiFl  780 (804)
                      +.++.|.+|++|.|+  ...|+|.
T Consensus        78 ~~~~~l~~gd~i~ig~~~~~~~~~  101 (102)
T cd00060          78 GEPVRLRDGDVIRLGNTSISFRFE  101 (102)
T ss_pred             CCcEECCCCCEEEECCeEEEEEEe
Confidence            999999999999999  6666653

Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).

>PF00498 FHA: FHA domain; InterPro: IPR000253 The forkhead-associated (FHA) domain [] is a phosphopeptide recognition domain found in many regulatory proteins

Probab=99.20  E-value=2.5e-11  Score=100.32  Aligned_cols=67  Identities=33%  Similarity=0.502  Sum_probs=58.6

Q ss_pred             EEeCCCCCCCCcceecCCCCCCccchhhceeeeecCCCcEEEEecc-cCCeEECcEEcCCCCccccCCCCeEEEc
Q 003666          700 VLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLG-KCPILVNNKEVPPRQSQGLGSSCLIEIR  773 (804)
Q Consensus       700 VtIGR~T~~~~VDIDLs~EGpaskISRrQA~Ikl~~dg~F~L~NlG-KngI~VNGk~I~~G~~~~L~sgsLIEIg  773 (804)
                      |+|||+   ...||-|.    ...|||+||.|.++.++.|+|+++| +|++||||+++.+++++.|++|++|.||
T Consensus         1 ~~iGR~---~~~di~l~----~~~iSr~Ha~i~~~~~~~~~i~d~~s~ngt~vng~~l~~~~~~~L~~gd~i~~G   68 (68)
T PF00498_consen    1 VTIGRS---PDCDIVLP----DPSISRRHARISFDDDGQFYIEDLGSTNGTFVNGQRLGPGEPVPLKDGDIIRFG   68 (68)
T ss_dssp             EEEESS---TTSSEEET----STTSSTTSEEEEEETTEEEEEEESSSSS-EEETTEEESSTSEEEE-TTEEEEET
T ss_pred             CEEcCC---CCCCEEEC----CHheeeeeeEEEEeceeeEEEEeCCCCCcEEECCEEcCCCCEEECCCCCEEEcC
Confidence            689999   45777773    5679999999999988899999996 8999999999999999999999999987

It displays specificity for phosphothreonine-containing epitopes but will also recognise phosphotyrosine with relatively high affinity. It spans approximately 80-100 amino acid residues folded into an 11-stranded beta sandwich, which sometimes contain small helical insertions between the loops connecting the strands []. To date, genes encoding FHA-containing proteins have been identified in eubacterial and eukaryotic but not archaeal genomes. The domain is present in a diverse range of proteins, such as kinases, phosphatases, kinesins, transcription factors, RNA-binding proteins and metabolic enzymes which partake in many different cellular processes - DNA repair, signal transduction, vesicular transport and protein degradation are just a few examples.; GO: 0005515 protein binding; PDB: 1LGQ_B 1LGP_A 2CSW_A 2PIE_A 3FM8_A 3MDB_B 3GQS_B 1UHT_A 1WLN_A 3POA_A ....

>PF13325 MCRS_N: N-terminal region of micro-spherule protein

Probab=99.01  E-value=1.4e-10  Score=117.63  Aligned_cols=68  Identities=25%  Similarity=0.284  Sum_probs=62.5

Q ss_pred             CCCCccCCCCCCCCCCCCCCCCCCCCCcCcHHHHHhhCCC-CCcch----hhhcccHHHHHHHHHHHhhhhhH
Q 003666          605 DAEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDL-DPDDQ----VSKYQHEDTRRAIIRLEQGAHSY  672 (804)
Q Consensus       605 ~~~~~~y~ll~DQ~~~~~~s~~d~~psFsD~E~~Ild~dL-~P~Dq----vsr~q~~~~kr~IrrLEqe~~s~  672 (804)
                      ++.+++|+||+||.+++++..++.+++|||+|++|+|.+| .|+|+    +++.++|++||+||+||+|+.+|
T Consensus       122 W~lmkqy~LL~DQ~v~~~~~~~~~~~sfsDaEd~i~d~~l~~~~de~l~~el~~~dr~~k~~ir~lE~el~~w  194 (199)
T PF13325_consen  122 WRLMKQYHLLPDQSVQPLPKQDDQVLSFSDAEDLIDDSELKDPRDEALEHELELADRRQKREIRQLENELSRW  194 (199)
T ss_pred             HHHHHHhchhhccccCCCCCCCccccccccHHHHhhccccccCcccccchhhhHHhHHHHHHHHHHHHHhhhh
Confidence            3689999999999999999874589999999999999999 68888    47889999999999999999998

>COG5025 Transcription factor of the Forkhead/HNF3 family [Transcription]

Probab=98.92  E-value=3.3e-10  Score=129.99  Aligned_cols=102  Identities=19%  Similarity=0.115  Sum_probs=93.5

Q ss_pred             CCcceEEEEecceeEEeecCeEEeCCCCCC---------------CCcceecCCCCCCccchhhceeeeecCC-CcEEEE
Q 003666          679 SHGAFAILYGRHSKHYIKKPEVLLGRATED---------------VVVDIDLGREGRTNKISRRQAMINMDEA-GSFHLK  742 (804)
Q Consensus       679 ~~~AlAvL~Gr~~~YyIrs~eVtIGR~T~~---------------~~VDIDLs~EGpaskISRrQA~Ikl~~d-g~F~L~  742 (804)
                      ..+|||+|+|-.|+||++..+|.+||..+-               +.+++++   |++++++|+|+.|+++.+ +.|+|+
T Consensus        70 ~~qayak~~g~~~t~~v~~~s~a~gr~~~il~s~~~~lt~s~~~~~~~~~~~---~~~k~~~~~~~sIr~Nls~~~a~~~  146 (610)
T COG5025          70 EIQAYAKLAGSNWTYYVPPYSYATGRGLAILNSPDKPLTLSKIYTWIHNTFF---YYAKVVSRWQNSIRHNLSLNDAFIK  146 (610)
T ss_pred             HhhhHHHhcCCCcccccCCeeeeeccccccccCcccCCcccceeeeeeeccc---ccccccchhhhhhhcccccCceEEE
Confidence            458999999999999999999999996553               4577888   999999999999999985 899999


Q ss_pred             ecccCCeEECcEEcCCCC---ccccCCCCeEEEcCeEEEEEeCh
Q 003666          743 NLGKCPILVNNKEVPPRQ---SQGLGSSCLIEIRGLAFIFETNQ  783 (804)
Q Consensus       743 NlGKngI~VNGk~I~~G~---~~~L~sgsLIEIggi~fiFllN~  783 (804)
                      .+||+++.|+|..+.-|.   ...|..|+++++++.+++|.++.
T Consensus       147 i~g~~g~~~~g~~~~igP~~~~~~l~~g~~~~~~~~~~~~~~p~  190 (610)
T COG5025         147 IEGRNGAKVKGHFWSIGPGHETQFLKSGLRLDGGGKQMMFTLPS  190 (610)
T ss_pred             EeccCCccccceeeccCCCccceeeccccccccccccccccCcc
Confidence            999999999999998876   79999999999999999999875

>TIGR03354 VI_FHA type VI secretion system FHA domain protein

Probab=98.59  E-value=1.3e-07  Score=104.47  Aligned_cols=89  Identities=16%  Similarity=0.232  Sum_probs=77.7

Q ss_pred             ecceeEEeecCeEEeCCCCCCCCcceecCCCCCCccchhhceeeeecCCCcEEEEecccCCeEEC--cEEcCCCCccccC
Q 003666          688 GRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVN--NKEVPPRQSQGLG  765 (804)
Q Consensus       688 Gr~~~YyIrs~eVtIGR~T~~~~VDIDLs~EGpaskISRrQA~Ikl~~dg~F~L~NlGKngI~VN--Gk~I~~G~~~~L~  765 (804)
                      |....|.+.....+|||...   .|+=|  ..+...|||+||+|.++ +|.|+|+.+++||+|||  |.++..|..++|.
T Consensus        14 g~~~~~~f~~~~~~IGR~~~---~d~~l--~d~~~~VS~~Ha~I~~~-~g~~~l~DlStNGT~VN~sg~~l~~~~~~~L~   87 (396)
T TIGR03354        14 GIAAQKTFGTNGGTIGRSED---CDWVL--PDPERHVSGRHARIRYR-DGAYLLTDLSTNGVFLNGSGSPLGRGNPVRLE   87 (396)
T ss_pred             CcceEEEECCCCEEEecCCC---CCEEe--CCCCCCcchhhcEEEEE-CCEEEEEECCCCCeEECCCCCCCCCCCceEcC
Confidence            55678888899999999864   34444  34566799999999987 68899999988999999  9999999999999


Q ss_pred             CCCeEEEcCeEEEEEeC
Q 003666          766 SSCLIEIRGLAFIFETN  782 (804)
Q Consensus       766 sgsLIEIggi~fiFllN  782 (804)
                      +|++|.||...+.|.+.
T Consensus        88 ~GD~I~iG~~~lrv~~~  104 (396)
T TIGR03354        88 QGDRLRLGDYEIRVSLG  104 (396)
T ss_pred             CCCEEEECCEEEEEEeC
Confidence            99999999999999995

Members of this protein family are FHA (forkhead-associated) domain-containing proteins that are part of type VI secretion loci in a considerable number of bacteria, most of which are known pathogens. Species include Pseudomonas aeruginosa PAO1, Aeromonas hydrophila, Yersinia pestis, Burkholderia mallei, etc.

>smart00240 FHA Forkhead associated domain

Probab=98.26  E-value=1.6e-06  Score=67.89  Aligned_cols=51  Identities=45%  Similarity=0.646  Sum_probs=42.2

Q ss_pred             EEeCCCCCCCCcceecCCCCCCccchhhceeeeecCCCcEEEEecc-cCCeEECcEEc
Q 003666          700 VLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLG-KCPILVNNKEV  756 (804)
Q Consensus       700 VtIGR~T~~~~VDIDLs~EGpaskISRrQA~Ikl~~dg~F~L~NlG-KngI~VNGk~I  756 (804)
                      ++|||...  ..||-|.  ++  .|||+||.|+++.++.|+|++.+ ++++||||++|
T Consensus         1 ~~iGr~~~--~~~i~~~--~~--~vs~~H~~i~~~~~~~~~i~d~~s~~gt~vng~~v   52 (52)
T smart00240        1 VTIGRSSE--DCDIQLP--GP--SISRRHAEIVYDGGGRFYLIDLGSTNGTFVNGKRI   52 (52)
T ss_pred             CEeCCCCC--CCCEEeC--CC--CcchhHcEEEECCCCeEEEEECCCCCCeeECCEEC
Confidence            47999876  3455552  33  39999999999998899999999 89999999975

Found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain.

>COG1716 FOG: FHA domain [Signal transduction mechanisms]

Probab=98.02  E-value=2.5e-05  Score=75.74  Aligned_cols=91  Identities=23%  Similarity=0.240  Sum_probs=69.7

Q ss_pred             eEEEEecceeEEeecCeEEeCCCCCCCCcceecCCCCCCccchhhceeeeecCCCcEEEEecc-cCCeEECcEEcCCCCc
Q 003666          683 FAILYGRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLG-KCPILVNNKEVPPRQS  761 (804)
Q Consensus       683 lAvL~Gr~~~YyIrs~eVtIGR~T~~~~VDIDLs~EGpaskISRrQA~Ikl~~dg~F~L~NlG-KngI~VNGk~I~~G~~  761 (804)
                      ..+.......+......++|||.   ...||=|    +...|||+||.|+++.+. |+++.+| .||.||||.++.+  .
T Consensus        74 ~~~~~~~~~~~~~~~~~~tigr~---~~~~i~~----~~~~vSR~Ha~l~~~~~~-~~~~d~~S~nGt~vn~~~v~~--~  143 (191)
T COG1716          74 VTIGLDEGSVIVLGEPVTTIGRD---PDNDIVL----DDDVVSRRHAELRREGNE-VFLEDLGSTNGTYVNGEKVRQ--R  143 (191)
T ss_pred             EEEecccCcccccccceEEeccC---CCCCEEc----CCCccccceEEEEEeCCc-eEEEECCCCcceEECCeEccC--c
Confidence            33334445567777779999992   2334434    568999999999999766 5557777 5999999999998  8


Q ss_pred             cccCCCCeEEEcCeEE-EEEeCh
Q 003666          762 QGLGSSCLIEIRGLAF-IFETNQ  783 (804)
Q Consensus       762 ~~L~sgsLIEIggi~f-iFllN~  783 (804)
                      +.|.+|++|.|+.... .+.+..
T Consensus       144 ~~l~~gd~i~i~~~~~~~~~~~~  166 (191)
T COG1716         144 VLLQDGDVIRLGGTLAERLRIIL  166 (191)
T ss_pred             EEcCCCCEEEECccceeeEeecc
Confidence            9999999999999888 555543

>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase

Probab=97.77  E-value=5.4e-05  Score=89.03  Aligned_cols=79  Identities=18%  Similarity=0.286  Sum_probs=64.7

Q ss_pred             EEe---ecCeEEeCCCCCCCCcceecCCCCCCccchhhceeeeecCCCcEEEEeccc-CCeEECcEE-----cCCCCccc
Q 003666          693 HYI---KKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGK-CPILVNNKE-----VPPRQSQG  763 (804)
Q Consensus       693 YyI---rs~eVtIGR~T~~~~VDIDLs~EGpaskISRrQA~Ikl~~dg~F~L~NlGK-ngI~VNGk~-----I~~G~~~~  763 (804)
                      +.+   .+.-.+|||.+.....+.-+-  =+...||+.||.|.++ ++.|||+.++. ||.||||..     +.++.+++
T Consensus       549 ~~l~~~~~~p~~iG~~~~~~~~~~~i~--i~~~~vS~~Ha~i~~~-~~~~~~~Dl~S~nGT~v~~~~~~r~~~~p~~~~~  625 (668)
T PLN02927        549 LCLTKDEDQPCIVGSEPDQDFPGMRIV--IPSSQVSKMHARVIYK-DGAFFLMDLRSEHGTYVTDNEGRRYRATPNFPAR  625 (668)
T ss_pred             eeeecCCCCCeEecCCCCcCCCCceEE--ecCCccChhHeEEEEE-CCEEEEEECCCCCccEEeCCCCceEecCCCCceE
Confidence            555   677789999876443222111  2568999999999999 88999999997 999998888     67899999


Q ss_pred             cCCCCeEEEcC
Q 003666          764 LGSSCLIEIRG  774 (804)
Q Consensus       764 L~sgsLIEIgg  774 (804)
                      |++|++|+||.
T Consensus       626 l~~~d~I~~g~  636 (668)
T PLN02927        626 FRSSDIIEFGS  636 (668)
T ss_pred             eCCCCEEEeCC
Confidence            99999999998

>COG3456 Predicted component of the type VI protein secretion system, contains a FHA domain [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=97.46  E-value=0.00023  Score=79.50  Aligned_cols=86  Identities=17%  Similarity=0.305  Sum_probs=72.0

Q ss_pred             eeEEeecCeEEeCCCCC-CCCcceecCCCCCCccchhhceeeeecCCCcEEEEecccCCeEECcEEcCCCCc-cccCCCC
Q 003666          691 SKHYIKKPEVLLGRATE-DVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQS-QGLGSSC  768 (804)
Q Consensus       691 ~~YyIrs~eVtIGR~T~-~~~VDIDLs~EGpaskISRrQA~Ikl~~dg~F~L~NlGKngI~VNGk~I~~G~~-~~L~sgs  768 (804)
                      ..+......-+|||+.+ +|.+      .-+-..||++||+|.++ +|.|+|+....++.+|||..++.|.. .+|.+|+
T Consensus        19 aq~~f~~~~g~IGrs~dcdW~i------~D~~~~VS~~Hc~I~~~-dg~f~L~DtS~g~l~VNgs~~~~g~~~~RLqqGd   91 (430)
T COG3456          19 AQKLFDRGGGVIGRSPDCDWQI------DDPERFVSKQHCTISYR-DGGFCLTDTSNGGLLVNGSDLPLGEGSARLQQGD   91 (430)
T ss_pred             hhhhhhcCCcccccCCCCCccc------cCcccccchhheEEEec-CCeEEEEecCCCceeecccccCCCCCccccccCC
Confidence            34455566788999644 2333      34678999999999999 78899999999999999999999987 9999999


Q ss_pred             eEEEcCeEEEEEeCh
Q 003666          769 LIEIRGLAFIFETNQ  783 (804)
Q Consensus       769 LIEIggi~fiFllN~  783 (804)
                      .|.||+..|.-.+..
T Consensus        92 ~i~iG~y~i~V~l~~  106 (430)
T COG3456          92 EILIGRYIIRVHLSR  106 (430)
T ss_pred             EEeeccEEEEEEecc
Confidence            999999999888853

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=95.21  E-value=0.029  Score=65.07  Aligned_cols=79  Identities=28%  Similarity=0.339  Sum_probs=64.2

Q ss_pred             ecceeEEeecCeEEeCCCCCCCCcceecCCCCCCccchhhceeeeecCC-CcEEEEecccCCeEECcEEcCCCCccccCC
Q 003666          688 GRHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEA-GSFHLKNLGKCPILVNNKEVPPRQSQGLGS  766 (804)
Q Consensus       688 Gr~~~YyIrs~eVtIGR~T~~~~VDIDLs~EGpaskISRrQA~Ikl~~d-g~F~L~NlGKngI~VNGk~I~~G~~~~L~s  766 (804)
                      +++-...+....|+|||..+..-.         -++-||+|-.++-+.+ |...++.+|.||.-|||+.+.+|..+.|.+
T Consensus        22 ~~~~~~~~~~~~~~~gr~pet~i~---------d~~cs~~qv~l~a~~~~~~v~~k~lg~np~~~~~~~~~~~~~~~l~~   92 (526)
T TIGR01663        22 AEHHFIHLDAGALFLGRGPETGIR---------DRKCSKRQIELQADLEKATVALKQLGVNPCGTGGLELKPGGEGELGH   92 (526)
T ss_pred             CCCCeeccCCCceEEccCcccccc---------hhhhchhhheeeecccCceEEEEEccCCCcccCceEecCCCeeeecC
Confidence            344444555678899997665433         4677999999998876 788899999999999999999999999999


Q ss_pred             CCeEEEcCe
Q 003666          767 SCLIEIRGL  775 (804)
Q Consensus       767 gsLIEIggi  775 (804)
                      |++++|=--
T Consensus        93 g~~l~~v~~  101 (526)
T TIGR01663        93 GDLLEIVNG  101 (526)
T ss_pred             CCEEEEecc
Confidence            999998533

Note that the EC number for the kinase function is: 2.7.1.78

>KOG0245 consensus Kinesin-like protein [Cytoskeleton]

Probab=93.69  E-value=0.18  Score=62.07  Aligned_cols=97  Identities=25%  Similarity=0.268  Sum_probs=77.7

Q ss_pred             cceEEEEecc--------eeEEeecCeEEeCCCCCCCCcceecCCCCCCccchhhceeeeecCC-CcEEEEecccCCeEE
Q 003666          681 GAFAILYGRH--------SKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEA-GSFHLKNLGKCPILV  751 (804)
Q Consensus       681 ~AlAvL~Gr~--------~~YyIrs~eVtIGR~T~~~~VDIDLs~EGpaskISRrQA~Ikl~~d-g~F~L~NlGKngI~V  751 (804)
                      +-.+-|.+-+        .-|||+.=+..|||......-||=|+  |  ..|--+|++|+.... .-..|..-+.--+||
T Consensus       452 kk~phLVNLneDPllSe~LlY~ikeG~TrVG~~~a~~~~DI~Ls--G--~~I~~qHC~i~~~~g~~~vtl~p~e~aetyV  527 (1221)
T KOG0245|consen  452 KKTPHLVNLNEDPLLSECLLYYIKEGETRVGREDASSRQDIVLS--G--QLIREQHCSIRNEGGNDVVTLEPCEDAETYV  527 (1221)
T ss_pred             ccCcceeccCCCchhhccEEEEeccCceecCCCCcccCCceEec--c--hhhhhhceEEEecCCCceEEeccCCccceeE
Confidence            3445555544        56999999999999999999999996  3  357789999987743 248888889999999


Q ss_pred             CcEEcCCCCccccCCCCeEEEcCeEEEEEeChH
Q 003666          752 NNKEVPPRQSQGLGSSCLIEIRGLAFIFETNQT  784 (804)
Q Consensus       752 NGk~I~~G~~~~L~sgsLIEIggi~fiFllN~~  784 (804)
                      |||.|.  ++..|++|+.|=+|| .-+|..|..
T Consensus       528 NGk~v~--ep~qL~~GdRiilG~-~H~frfn~P  557 (1221)
T KOG0245|consen  528 NGKLVT--EPTQLRSGDRIILGG-NHVFRFNHP  557 (1221)
T ss_pred             ccEEcC--CcceeccCCEEEEcC-ceeEEecCH
Confidence            999997  588999999999998 455665544

>KOG1881 consensus Anion exchanger adaptor protein Kanadaptin, contains FHA domain [General function prediction only]

Probab=92.25  E-value=0.14  Score=61.08  Aligned_cols=80  Identities=23%  Similarity=0.367  Sum_probs=66.7

Q ss_pred             ecCeEEeCCCCCCCCcceecCCCCCCccchhhceeeeecCCC-c---------EEEEeccc-CCeEECcEEcCCCCcccc
Q 003666          696 KKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAG-S---------FHLKNLGK-CPILVNNKEVPPRQSQGL  764 (804)
Q Consensus       696 rs~eVtIGR~T~~~~VDIDLs~EGpaskISRrQA~Ikl~~dg-~---------F~L~NlGK-ngI~VNGk~I~~G~~~~L  764 (804)
                      .+..++|||-+.   -|+=|  +  ..-|||-||+|.|..+| .         |||..+|. .|.|+|-.+|++-.=+++
T Consensus       175 ~~~~~~fgr~~~---cD~~~--e--HpsISr~h~vlQy~~~~~~~p~~s~~~g~~i~dlgsThgt~~NK~rvppk~yir~  247 (793)
T KOG1881|consen  175 GAAACLFGRLGG---CDVAL--E--HPSISRFHAVLQYKASGPDDPCASNGEGWYIYDLGSTHGTFLNKDRVPPKVYIRD  247 (793)
T ss_pred             cceeEEecccCC---Ccccc--c--cCcccccceeeeccCCCCCccccCCCCceEEeeccccccceeccccCCCcchhhh
Confidence            344578999763   34433  3  44699999999999753 5         99999998 999999999999999999


Q ss_pred             CCCCeEEEcCeEEEEEeC
Q 003666          765 GSSCLIEIRGLAFIFETN  782 (804)
Q Consensus       765 ~sgsLIEIggi~fiFllN  782 (804)
                      +=|.++++||-.++|++-
T Consensus       248 ~Vg~v~~fggsTrl~i~Q  265 (793)
T KOG1881|consen  248 RVGHVARFGGSTRLYIFQ  265 (793)
T ss_pred             hHHHHHHhcCceEEEEee
Confidence            999999999999999873

>KOG1882 consensus Transcriptional regulator SNIP1, contains FHA domain [Signal transduction mechanisms]

Probab=86.69  E-value=1.1  Score=48.29  Aligned_cols=53  Identities=21%  Similarity=0.305  Sum_probs=45.7

Q ss_pred             CccchhhceeeeecC------CC------cEEEEeccc-CCeEECcEEcCCCCccccCCCCeEEEc
Q 003666          721 TNKISRRQAMINMDE------AG------SFHLKNLGK-CPILVNNKEVPPRQSQGLGSSCLIEIR  773 (804)
Q Consensus       721 askISRrQA~Ikl~~------dg------~F~L~NlGK-ngI~VNGk~I~~G~~~~L~sgsLIEIg  773 (804)
                      ...-|.+||+|.|..      ||      .-||-.||. ||.|+|.++|.+-.-+.|..+++|-+|
T Consensus       211 hpScSKQHaviQyR~v~~~r~dGt~grrvkpYiiDLgS~NgTfLNnk~IepqRYyEL~ekDvlkfg  276 (293)
T KOG1882|consen  211 HPSCSKQHAVIQYRLVEFTRADGTVGRRVKPYIIDLGSGNGTFLNNKVIEPQRYYELREKDVLKFG  276 (293)
T ss_pred             CccccccceeeeeeecccccCCCccceeeeeEEEecCCCCcceecCcccCchheeeeecCceeeec
Confidence            445689999999985      43      368889997 999999999999888999999999887

>TIGR02500 type_III_yscD type III secretion apparatus protein, YscD/HrpQ family

Probab=86.21  E-value=2.6  Score=47.53  Aligned_cols=88  Identities=22%  Similarity=0.316  Sum_probs=62.2

Q ss_pred             EEEEecc--eeEEeecCeEEeC-CCCCCCCcceecCCCCCCccchhhceeeeecCCCcEEEEecccCCeEECcEEcCCCC
Q 003666          684 AILYGRH--SKHYIKKPEVLLG-RATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQ  760 (804)
Q Consensus       684 AvL~Gr~--~~YyIrs~eVtIG-R~T~~~~VDIDLs~EGpaskISRrQA~Ikl~~dg~F~L~NlGKngI~VNGk~I~~G~  760 (804)
                      -+|.|.+  ..+.+..-+.+|| |.   ...||=|    .-..|||+|++|....++ +.|..- ..++++||.++.-..
T Consensus         4 rvl~G~~~G~~~~L~~g~~~iG~~~---~~~di~L----~d~~~~~~h~~l~v~~~~-~~l~~~-~~~~~~~g~~~~~~~   74 (410)
T TIGR02500         4 RVLSGPHRGAELPLPEGNLVLGTDA---ADCDIVL----SDGGIAAVHVSLHVRLEG-VTLAGA-VEPAWEEGGVLPDEE   74 (410)
T ss_pred             EEecCCCCCcEEECCCCceEeccCC---CCcEEEe----CCCCccchheEEEEcCce-EEEecC-CcceeECCcccccCC
Confidence            4455543  5667777778999 76   3344445    356799999999999766 444422 234899995554444


Q ss_pred             ccccCCCCeEEEcCeEEEEE
Q 003666          761 SQGLGSSCLIEIRGLAFIFE  780 (804)
Q Consensus       761 ~~~L~sgsLIEIggi~fiFl  780 (804)
                      -..|..+..|+++++.|.|=
T Consensus        75 g~~l~~~~~l~~g~~~~~~g   94 (410)
T TIGR02500        75 GTPLPSGTPLLVAGVAFALG   94 (410)
T ss_pred             CCccCCCCceecceeEEecc
Confidence            55688999999999999993

This family represents a conserved protein of bacterial type III secretion systems. Gene symbols are variable from species to species. Members are designated YscD in Yersinia, HrpQ in Pseudomonas syringae, and EscD in enteropathogenic Escherichia coli. In the Chlamydiae, this model describes the C-terminal 400 residues of a longer protein.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	804
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
1gxc_A	149	CHK2, CDS1, serine/threonine-protein kinase CHK2;	2e-04
1lgp_A	116	Cell cycle checkpoint protein CHFR; FHA, tungstate	4e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 2e-06
 Identities = 44/292 (15%), Positives = 89/292 (30%), Gaps = 71/292 (24%)

Query: 561 PNFVSN-GCKSHERNTNGV--KQELDYPAITQESHALN----------------VE--VG 599
             FV N  CK  +     +  K+E+D+  I     A++                V+  V 
Sbjct: 27  DAFVDNFDCKDVQDMPKSILSKEEIDH--IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVE 84

Query: 600 SLHIPDAEPIMNPSTTEPEDPSVESDDDDVPYFSDIEAMILDMDLDPDDQVSKYQ-HEDT 658
            +   + + +M+P  TE   PS+ +      Y    + +  D  +     VS+ Q +   
Sbjct: 85  EVLRINYKFLMSPIKTEQRQPSMMTRM----YIEQRDRLYNDNQVFAKYNVSRLQPYLKL 140

Query: 659 RRAIIRLEQGAHSYMQRAILSHGAFAILYGRHSKHYIKKPEVLLGRATEDVVVD------ 712
           R+A++ L         + +L  G      G   K        +         V       
Sbjct: 141 RQALLELRPA------KNVLIDGVLGS--G---KT------WVALDVCLSYKVQCKMDFK 183

Query: 713 ---IDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSS-- 767
              ++L        +      +      ++  ++     I +    +     + L S   
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243

Query: 768 --CLIEIRGL-------AFIFE------TNQTCVKRYLDSIMKENRTHEHQS 804
             CL+ +  +       AF         T    V  +L +    + + +H S
Sbjct: 244 ENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS 295

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 3e-04
 Identities = 38/288 (13%), Positives = 72/288 (25%), Gaps = 88/288 (30%)

Query: 3   EYERSALTLPK---VFSRAGNSKEIKLSSGKRK---------AESVRSC-----YYALRK 45
           ++    LT  +   +  +  + +   L               AES+R        +   K
Sbjct: 292 DHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW---K 348

Query: 46  RIHNEPFNSI---DLSFLNAPGNRNFYG-------NGDEPPSRNCML------GDPM--A 87
            ++ +   +I    L+ L     R  +        +   P     ++       D M   
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVV 408

Query: 88  NHF---GLQDSNLDVMHRKFPDIPMDDDASCRDGPTLHR-------FHGGFDH----PGE 133
           N      L +          P I ++      +   LHR           FD     P  
Sbjct: 409 NKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY 468

Query: 134 ED---FS--------MQQGEMHEEIPHIFEENQSFRGNGARVVELGL----PGQVPNLFE 178
            D   +S        ++  E       +F     FR    ++          G + N   
Sbjct: 469 LDQYFYSHIGHHLKNIEHPERMTLFRMVF---LDFRFLEQKIRHDSTAWNASGSILNTL- 524

Query: 179 ADHMEANPLSTYGQ--TNDDAGN---ICTLE------GNQVFRSPIPD 215
                   L  Y     ++D      +  +          +  S   D
Sbjct: 525 QQ------LKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTD 566

>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2 Length = 149

 Score = 42.0 bits (98), Expect = 2e-04
 Identities = 14/101 (13%), Positives = 33/101 (32%), Gaps = 9/101 (8%)

Query: 689 RHSKHYIKKPEVLLGRATE-DVVV-DIDLGREGRTNKISRRQAMINMD----EAGSFHLK 742
             +           GR    +    +  L R  +    S++   I  +     +   +++
Sbjct: 39  GFANLECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIE 98

Query: 743 NLGKCPILVNNKEVPPRQSQGLGSSCLIEI---RGLAFIFE 780
           +       VN + V   + + L ++  I +   R   F+F 
Sbjct: 99  DHSGNGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFF 139

>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A Length = 116

 Score = 39.8 bits (93), Expect = 4e-04
 Identities = 18/96 (18%), Positives = 39/96 (40%), Gaps = 17/96 (17%)

Query: 695 IKKPEVLLGRATE-DVVVDIDLGREGRTNKISRRQAMINMDEA-GSFHLKNLGKCPILVN 752
           ++K E  +GR    D+    +         +S     I +DE  G   L++      ++N
Sbjct: 21  LRKREWTIGRRRGCDLSFPSN-------KLVSGDHCRIVVDEKSGQVTLEDTSTSGTVIN 73

Query: 753 NKEVPPRQSQGLGSSCLIEI--------RGLAFIFE 780
             +V  +Q+  L +  +I +          +A+++E
Sbjct: 74  KLKVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLYE 109

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	804
d2piea1	127	b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8	6e-04

>d2piea1 b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 {Human (Homo sapiens) [TaxId: 9606]} Length = 127

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Ubiquitin ligase protein RNF8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 6e-04
 Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 4/76 (5%)

Query: 698 PEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLG-KCPILVNNKEV 756
            EV +GR      V   L  +     ISR   ++  +  G + + +      + +N   +
Sbjct: 24  CEVTVGR---GFGVTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARL 80

Query: 757 PPRQSQGLGSSCLIEI 772
            P +   +     I++
Sbjct: 81  EPLRVYSIHQGDYIQL 96

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	804
d2piea1	127	Ubiquitin ligase protein RNF8 {Human (Homo sapiens	99.36
d2ff4a3	99	Probable regulatory protein EmbR, C-terminal domai	99.28
d1g6ga_	127	Phosphotyrosine binding domain of Rad53 {Baker's y	99.26
d1uhta_	118	FHA domain containing protein At4G14490 {Thale cre	99.15
d1gxca_	116	Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.12
d1lgpa_	113	Cell cycle checkpoint protein Chfr {Human (Homo sa	99.1
d2brfa1	101	Polynucleotide kinase 3'-phosphatase {Human (Homo	99.1
d2affa1	98	Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]}	99.08
d1mzka_	122	Kinase associated protein phosphatase {Thale cress	99.08
d1wlna1	107	Afadin {Mouse (Mus musculus) [TaxId: 10090]}	98.87
d2g1la1	102	Kinesin-like protein kif1c {Human (Homo sapiens) [	98.78
d1dmza_	158	Phosphotyrosine binding domain of Rad53 {Baker's y	98.7

>d2piea1 b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Ubiquitin ligase protein RNF8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=2.4e-12  Score=93.62  Aligned_cols=95  Identities=15%  Similarity=0.151  Sum_probs=76.2

Q ss_pred             CCEEEEEECCEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECCCCCEEEEECC-CCCEEECCEECCCCCCCCCCCC
Q ss_conf             431698433808967999999831004898997500021002225489959999523-4974978677199994136999
Q 003666          689 RHSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLG-KCPILVNNKEVPPRQSQGLGSS  767 (804)
Q Consensus       689 r~~~YyIrs~eVtIGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~dg~F~L~NlG-Kn~I~VNGk~I~~G~~~~L~sg  767 (804)
                      ..|.++-...+++|||..   .+|+.|........|||+||+|.++.+|.|+|.++| +||+||||.++.+++++.|.+|
T Consensus        15 ~~~~~l~~~~~~tiGR~~---~~~~~l~~~~~~~~VSR~Ha~i~~~~~g~~~l~D~~S~NGt~lNg~~l~~~~~~~L~~G   91 (127)
T d2piea1          15 AGWLLLEDGCEVTVGRGF---GVTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQG   91 (127)
T ss_dssp             SCBEEECTTCCEEEESSS---SSSEECCCSSCTTSSCSSCEEEEECTTSCEEEEECSCSSCEEETTEECCTTCCEECCTT
T ss_pred             CCEEECCCCCEEEECCCC---CCCEEECCCCCCCCCCHHHEEEEECCCCEEEEEECCCCCCEEECCEECCCCCEEECCCC
T ss_conf             884885789988753678---76589789975661662361899979985999987773772799999469930694799


Q ss_pred             CEEEEC-------CEEEEEEECHHHH
Q ss_conf             937886-------9089999294769
Q 003666          768 CLIEIR-------GLAFIFETNQTCV  786 (804)
Q Consensus       768 sLIEIg-------gi~fiFllN~~lV  786 (804)
                      ++|+||       .+.|.|++-.+-.
T Consensus        92 D~I~iG~p~~~~~~~~f~~~~~~~~~  117 (127)
T d2piea1          92 DYIQLGVPLENKENAEYEYEVTEEDW  117 (127)
T ss_dssp             CEEEESCCCTTCSSCSEEEEEEEEEH
T ss_pred             CEEEECCCCCCCCCEEEEEEECCCCC
T ss_conf             99995888877764479999573200

>d2ff4a3 b.26.1.2 (A:284-382) Probable regulatory protein EmbR, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Probable regulatory protein EmbR, C-terminal domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.28  E-value=1.9e-11  Score=87.95  Aligned_cols=94  Identities=20%  Similarity=0.269  Sum_probs=76.6

Q ss_pred             CCCCEEEEEEC--CEEEEEECCEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECCCCCEEEEECC-CCCEEECCEE
Q ss_conf             78613999844--31698433808967999999831004898997500021002225489959999523-4974978677
Q 003666          679 SHGAFAILYGR--HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLG-KCPILVNNKE  755 (804)
Q Consensus       679 ~~~AlAvL~Gr--~~~YyIrs~eVtIGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~dg~F~L~NlG-Kn~I~VNGk~  755 (804)
                      +.++.|.|.+-  --+|.+.+..++|||...   -||=|    +...|||+||.|.++ ++.|+|+.+| +||+||||++
T Consensus         2 g~~~~~~l~~~~~G~~~~l~~~~~~IGR~~~---~di~l----~d~~VSr~Ha~i~~~-~~~~~i~Dl~S~nGt~vNg~~   73 (99)
T d2ff4a3           2 GQQAVAYLHDIASGRGYPLQAAATRIGRLHD---NDIVL----DSANVSRHHAVIVDT-GTNYVINDLRSSNGVHVQHER   73 (99)
T ss_dssp             SSBCCCEEEETTTCCEEECCSSEEEEESSTT---SSEEC----CCTTSCTTCEEEEEC-SSCEEEEECSCSSCCEETTEE
T ss_pred             CCCCEEEEECCCCCCEEEECCCCEEEEECCC---CCEEE----CCCCCCCEEEEEEEE-CCEEEEEECCCCCCCEECCEE
T ss_conf             9754799870799879998998889814768---99998----896626036999975-998999999985887699999


Q ss_pred             CCCCCCCCCCCCCEEEECCEEEEEEEC
Q ss_conf             199994136999937886908999929
Q 003666          756 VPPRQSQGLGSSCLIEIRGLAFIFETN  782 (804)
Q Consensus       756 I~~G~~~~L~sgsLIEIggi~fiFllN  782 (804)
                      +.  .+..|.+|++|+||...|.|.+-
T Consensus        74 i~--~~~~L~~Gd~i~iG~~~~~f~~~   98 (99)
T d2ff4a3          74 IR--SAVTLNDGDHIRICDHEFTFQIS   98 (99)
T ss_dssp             CS--SEEEECTTCEEEETTEEEEEECS
T ss_pred             CC--CCEECCCCCEEEECCEEEEEEEE
T ss_conf             48--85699999999999999999992

>d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Phosphotyrosine binding domain of Rad53
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.26  E-value=2.2e-11  Score=87.55  Aligned_cols=85  Identities=21%  Similarity=0.286  Sum_probs=72.0

Q ss_pred             EECCEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECCCCCEEEEECCCCCEEECCEECCCCCCCCCCCCCEEEEC-
Q ss_conf             4338089679999998310048989975000210022254899599995234974978677199994136999937886-
Q 003666          695 IKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIR-  773 (804)
Q Consensus       695 Irs~eVtIGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~dg~F~L~NlGKn~I~VNGk~I~~G~~~~L~sgsLIEIg-  773 (804)
                      ..+...+|||+.   ..|+-|   .....|||+||.|.++.++.|++...++||+||||.++.+++.+.|.+|+.|+|| 
T Consensus        33 ~~~~~~~iGR~~---~~d~~l---~d~~~VSr~Ha~i~~~~~~~~~~d~~S~NGT~vNg~~l~~~~~~~L~~GD~I~iG~  106 (127)
T d1g6ga_          33 SIKKVWTFGRNP---ACDYHL---GNISRLSNKHFQILLGEDGNLLLNDISTNGTWLNGQKVEKNSNQLLSQGDEITVGV  106 (127)
T ss_dssp             SCCEEEEEESST---TSSEEC---CSCTTSCSSCEEEEECTTSCEEEEECCSSCCEETTEECCTTCCEECCTTCEEEECT
T ss_pred             CCCCCEEECCCC---CCCCCC---CCCCHHHHHHHHEEECCCEEEEEECCCCCEEEECCEEECCCCEEECCCCCEEEECC
T ss_conf             288338973684---467168---99514509998703016479999999966047998894599878938999999798


Q ss_pred             -----CEEEEEEECHHH
Q ss_conf             -----908999929476
Q 003666          774 -----GLAFIFETNQTC  785 (804)
Q Consensus       774 -----gi~fiFllN~~l  785 (804)
                           -++|+|.+|...
T Consensus       107 ~~~~~~v~~~~~~~~~f  123 (127)
T d1g6ga_         107 GVESDILSLVIFINDKF  123 (127)
T ss_dssp             TSGGGCEEEEEEECHHH
T ss_pred             CCCCCEEEEEEEECCHH
T ss_conf             88776699999986767

>d1uhta_ b.26.1.2 (A:) FHA domain containing protein At4G14490 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: FHA domain containing protein At4G14490
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.15  E-value=5.9e-11  Score=84.81  Aligned_cols=83  Identities=23%  Similarity=0.392  Sum_probs=68.1

Q ss_pred             EEEEE-CCEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECCCCCEEEEECC-CCCEEECCEECCCCCCCCCCCCCE
Q ss_conf             69843-3808967999999831004898997500021002225489959999523-497497867719999413699993
Q 003666          692 KHYIK-KPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLG-KCPILVNNKEVPPRQSQGLGSSCL  769 (804)
Q Consensus       692 ~YyIr-s~eVtIGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~dg~F~L~NlG-Kn~I~VNGk~I~~G~~~~L~sgsL  769 (804)
                      +|.+. ...++|||....+  ||-|    +...|||+||.|.++ ++.|+|+.+| +|++||||+++.++..+.|.++++
T Consensus        26 ~~~l~~~~~~~iGR~~~~~--di~l----~d~~VSr~Ha~i~~~-~~~~~i~Dl~S~nGT~vng~~l~~~~~~~L~~Gd~   98 (118)
T d1uhta_          26 ALDYKPGSTIRVGRIVRGN--EIAI----KDAGISTKHLRIESD-SGNWVIQDLGSSNGTLLNSNALDPETSVNLGDGDV   98 (118)
T ss_dssp             BCCBCTTCCEEEESSSTTC--SEEC----CSSSSCTTCEEEEEC-SSSEEEECCCCSSCCEESSSBCCTTCEEECCTTEE
T ss_pred             EEEECCCCEEEECCCCCCC--EEEE----CCCCCCHHEEEEEEE-CCEEEEEECCCCCEEEECCEECCCCCEEECCCCCE
T ss_conf             8996899979979977688--1996----962765130399997-99899998898543479999948996789999999


Q ss_pred             EEECCEEEEEEE
Q ss_conf             788690899992
Q 003666          770 IEIRGLAFIFET  781 (804)
Q Consensus       770 IEIggi~fiFll  781 (804)
                      |.||...|+|+.
T Consensus        99 i~lG~~~~~~v~  110 (118)
T d1uhta_          99 IKLGEYTSILVN  110 (118)
T ss_dssp             EEETTTEEEEEE
T ss_pred             EEECCEEEEEEE
T ss_conf             999999999998

>d1gxca_ b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Chk2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=8.5e-11  Score=83.79  Aligned_cols=87  Identities=13%  Similarity=0.035  Sum_probs=69.2

Q ss_pred             EEEEEECCEEEECCCCCCCCCCE---ECCCCCCCCCCHHHCEEEEECC----CCCEEEEECCCCCEEECCEECCCCCCCC
Q ss_conf             16984338089679999998310---0489899750002100222548----9959999523497497867719999413
Q 003666          691 SKHYIKKPEVLLGRATEDVVVDI---DLGREGRTNKISRRQAMINMDE----AGSFHLKNLGKCPILVNNKEVPPRQSQG  763 (804)
Q Consensus       691 ~~YyIrs~eVtIGR~T~~~~VDI---DLs~EGpa~kISRrQA~Ikl~~----dg~F~L~NlGKn~I~VNGk~I~~G~~~~  763 (804)
                      -.+.+...+++|||+++ +.+-+   +++..+....|||+||+|..+.    ++.|+|...++||+||||+++.++.++.
T Consensus        13 ~~~~L~~~~~~iGR~~~-cdi~l~~~~~~~~~~~~~ISr~H~~I~~~~~~~~~~~~~i~d~S~NGT~vN~~~i~~~~~~~   91 (116)
T d1gxca_          13 ANLECVNDNYWFGRDKS-CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGTFVNTELVGKGKRRP   91 (116)
T ss_dssp             CCEEECSSEEEEESSTT-CSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEEECCSSCEEETTEECCTTCEEE
T ss_pred             CEEEECCCCEEEEECCC-CCEEECCCCCCCCCCCCEEECCEEEEEEECCCCCCCEEEEECCCCCCCEECCEECCCCCEEE
T ss_conf             63885888789615777-87584487323433343372314999994256898789997898657469998967997788


Q ss_pred             CCCCCEEEECCEEEE
Q ss_conf             699993788690899
Q 003666          764 LGSSCLIEIRGLAFI  778 (804)
Q Consensus       764 L~sgsLIEIggi~fi  778 (804)
                      |.+|++|.||...+.
T Consensus        92 L~~gD~I~ig~~~~~  106 (116)
T d1gxca_          92 LNNNSEIALSLSRNK  106 (116)
T ss_dssp             CCTTEEEEESSTTCE
T ss_pred             CCCCCEEEECCCEEE
T ss_conf             899999998997748

>d1lgpa_ b.26.1.2 (A:) Cell cycle checkpoint protein Chfr {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Cell cycle checkpoint protein Chfr
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.9e-10  Score=81.58  Aligned_cols=78  Identities=21%  Similarity=0.306  Sum_probs=66.3

Q ss_pred             CEEEEEECCEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECCC-CCEEEEECCCCCEEECCEECCCCCCCCCCCCC
Q ss_conf             31698433808967999999831004898997500021002225489-95999952349749786771999941369999
Q 003666          690 HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEA-GSFHLKNLGKCPILVNNKEVPPRQSQGLGSSC  768 (804)
Q Consensus       690 ~~~YyIrs~eVtIGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d-g~F~L~NlGKn~I~VNGk~I~~G~~~~L~sgs  768 (804)
                      ...+.+.+.+++|||...   .||-|.   ....|||+||.|+++.+ +.|++...++||+||||+++..++++.|++|+
T Consensus        16 ~~~~~l~~~~~~iGR~~~---~di~l~---d~~~iSr~Ha~I~~~~~~~~~~~~d~S~nGT~vNg~~i~~~~~~~L~~GD   89 (113)
T d1lgpa_          16 EPHVLLRKREWTIGRRRG---CDLSFP---SNKLVSGDHCRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGD   89 (113)
T ss_dssp             SCCEEECSSEEEEESSTT---SSEECT---TCTTSCTTCEEEEECTTTCCEEEEECSSSCCCCCCCCCCCSSCCCCCTTC
T ss_pred             CEEEEECCCCEEECCCCC---CCEEEC---CCCCCCHHHEEEEECCCEEEEEECCCCCEEEEECCEECCCCCEEECCCCC
T ss_conf             548996998784188977---876804---88876959929987054036873089864568999995789468989999


Q ss_pred             EEEEC
Q ss_conf             37886
Q 003666          769 LIEIR  773 (804)
Q Consensus       769 LIEIg  773 (804)
                      +|.|+
T Consensus        90 ~I~i~   94 (113)
T d1lgpa_          90 VIYLV   94 (113)
T ss_dssp             EEEEE
T ss_pred             EEEEE
T ss_conf             99996

>d2brfa1 b.26.1.2 (A:8-108) Polynucleotide kinase 3'-phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Polynucleotide kinase 3'-phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=7.4e-11  Score=84.17  Aligned_cols=82  Identities=20%  Similarity=0.216  Sum_probs=67.4

Q ss_pred             EEEEECCEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECC-CCCEEEEECCCCCEEECCEECCCCCCCCCCCCCEE
Q ss_conf             69843380896799999983100489899750002100222548-99599995234974978677199994136999937
Q 003666          692 KHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDE-AGSFHLKNLGKCPILVNNKEVPPRQSQGLGSSCLI  770 (804)
Q Consensus       692 ~YyIrs~eVtIGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~-dg~F~L~NlGKn~I~VNGk~I~~G~~~~L~sgsLI  770 (804)
                      .+......++|||+.+   .+|+      ..+|||+||.|..+. ++.|++..+|+||.||||+++.+++++.|.+|++|
T Consensus        16 ~l~~~~~~~~iGR~~~---~~i~------d~~vSr~Ha~i~~~~~~~~~~v~~~s~Ngt~vNg~~l~~~~~~~L~~GD~i   86 (101)
T d2brfa1          16 FLPSDGQALVLGRGPL---TQVT------DRKCSRTQVELVADPETRTVAVKQLGVNPSTTGTQELKPGLEGSLGVGDTL   86 (101)
T ss_dssp             ECCSTTCCEEECSBTT---TTBC------CTTSCSSCEEEEEETTTTEEEEEECSSSCCEEC-CBCCTTCEEEEETTCEE
T ss_pred             EEECCCCEEECCCCCC---CCCC------CCCCCHHHEEEEECCCCEEEEEECCCCCCEEEEEEEECCCEEEECCCCCEE
T ss_conf             9846997697166755---6533------788194266998536740699983777550899999225506599999999


Q ss_pred             EECCEEEEEEEC
Q ss_conf             886908999929
Q 003666          771 EIRGLAFIFETN  782 (804)
Q Consensus       771 EIggi~fiFllN  782 (804)
                      +|+.-.|.|.+-
T Consensus        87 ~l~~~~~~y~v~   98 (101)
T d2brfa1          87 YLVNGLHPLTLR   98 (101)
T ss_dssp             EEETTEEEEEEE
T ss_pred             EECCCEEEEEEE
T ss_conf             995880889999

>d2affa1 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Antigen ki-67
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=4e-10  Score=79.50  Aligned_cols=81  Identities=22%  Similarity=0.343  Sum_probs=69.1

Q ss_pred             EEEEEECCEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECCCCCEEEEECCC-CCEEECCEECCCCCCCCCCCCCE
Q ss_conf             16984338089679999998310048989975000210022254899599995234-97497867719999413699993
Q 003666          691 SKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGK-CPILVNNKEVPPRQSQGLGSSCL  769 (804)
Q Consensus       691 ~~YyIrs~eVtIGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~dg~F~L~NlGK-n~I~VNGk~I~~G~~~~L~sgsL  769 (804)
                      -+|.+....++|||...   .||-|    +...|||+||.|.++ ++.|+|+.++. ++++|||+++.  +.+.|.+|++
T Consensus        16 ~~~~L~~~~~~IGr~~~---~di~l----~~~~is~~Ha~i~~~-~~~~~i~d~~s~ng~~vNg~~l~--~~~~L~~Gd~   85 (98)
T d2affa1          16 PHFPLSLSTCLFGRGIE---CDIRI----QLPVVSKQHCKIEIH-EQEAILHNFSSTNPTQVNGSVID--EPVRLKHGDV   85 (98)
T ss_dssp             EEEECCSSEEEEESSTT---SSEEE----CCTTSCSSBEEEEEC-SSCEEEEECCSSSCCEETTEECS--SCEEECTTCE
T ss_pred             EEEEECCCCEEEEECCC---CCEEE----CCCCCCCEEEEEEEE-CCEEEEEECCCCCCCEECCEECC--CCEECCCCCE
T ss_conf             19997998889801878---98995----898827103999995-89899998997644169999988--8469899989


Q ss_pred             EEECCEEEEEEE
Q ss_conf             788690899992
Q 003666          770 IEIRGLAFIFET  781 (804)
Q Consensus       770 IEIggi~fiFll  781 (804)
                      |.||+..|.|.-
T Consensus        86 I~iG~~~~~fe~   97 (98)
T d2affa1          86 ITIIDRSFRYEN   97 (98)
T ss_dssp             EEETTEEEEEEE
T ss_pred             EEECCEEEEEEE
T ss_conf             999999999973

>d1mzka_ b.26.1.2 (A:) Kinase associated protein phosphatase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Kinase associated protein phosphatase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.08  E-value=2.5e-10  Score=80.80  Aligned_cols=92  Identities=21%  Similarity=0.344  Sum_probs=70.0

Q ss_pred             EEEEEECC--EEEEEECC-----EEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECC-CCCEEEEECC-CCCEEECC
Q ss_conf             39998443--16984338-----0896799999983100489899750002100222548-9959999523-49749786
Q 003666          683 FAILYGRH--SKHYIKKP-----EVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDE-AGSFHLKNLG-KCPILVNN  753 (804)
Q Consensus       683 lAvL~Gr~--~~YyIrs~-----eVtIGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~-dg~F~L~NlG-Kn~I~VNG  753 (804)
                      |.++.|..  .+|.+...     .++|||...   -||=|    +...|||+||.|.++. ++.|||..+| +||.||||
T Consensus         8 L~vi~Gp~~g~~~~l~~~~~~~~~~~IGR~~~---~di~l----~d~~vSr~Ha~i~~~~~~~~~~v~DlgS~nGT~vNg   80 (122)
T d1mzka_           8 LEVIAGPAIGLQHAVNSTSSSKLPVKLGRVSP---SDLAL----KDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLVNS   80 (122)
T ss_dssp             EEECSSTTCSCEEEECTTCSTTCSEEEESSSS---CSEEC----CCTTSSSEEEEEEEETTTTEEEEEETTCSSCCEETT
T ss_pred             EEEEECCCCCCEEEECCCCCCCCCEEECCCCC---CCEEE----CCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEECC
T ss_conf             99998888884899467877768799558989---88998----898867332599996898979995289877459999


Q ss_pred             EECC--------CCCCCCCCCCCEEEECCEEEEEEE
Q ss_conf             7719--------999413699993788690899992
Q 003666          754 KEVP--------PRQSQGLGSSCLIEIRGLAFIFET  781 (804)
Q Consensus       754 k~I~--------~G~~~~L~sgsLIEIggi~fiFll  781 (804)
                      +++.        +|.++.|++|++|.||...++|+-
T Consensus        81 ~~i~~~~~~~~~~g~~~~L~~gd~i~iG~~~~~~v~  116 (122)
T d1mzka_          81 HSISHPDLGSRKWGNPVELASDDIITLGTTTKVYVR  116 (122)
T ss_dssp             EESSCCCTTTCCCCCCEECCTTEEEECSSSCEEEEE
T ss_pred             EECCCCCCCCCCCCCEEECCCCCEEEECCEEEEEEE
T ss_conf             997454345456896588689999998992899999

>d1wlna1 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Afadin
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.87  E-value=5.9e-09  Score=72.15  Aligned_cols=85  Identities=14%  Similarity=0.124  Sum_probs=68.0

Q ss_pred             CEEEEEECCEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECCCCCEEEEECCC-CCEEECCEECCCCCCCCCCCCC
Q ss_conf             316984338089679999998310048989975000210022254899599995234-9749786771999941369999
Q 003666          690 HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEAGSFHLKNLGK-CPILVNNKEVPPRQSQGLGSSC  768 (804)
Q Consensus       690 ~~~YyIrs~eVtIGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~dg~F~L~NlGK-n~I~VNGk~I~~G~~~~L~sgs  768 (804)
                      -..|+++...++|||.... ..||-|  .|+  .|||+||.|... ++.|+|+.++. +++||||++|.  +++.|.+|+
T Consensus        21 ~~~~~l~~~~~~iG~~rs~-~~dI~L--~~~--~Vs~~Ha~i~~~-~~~~~l~d~~s~~gt~vng~~v~--~~~~L~~gd   92 (107)
T d1wlna1          21 PKLYRLQLSVTEVGTEKFD-DNSIQL--FGP--GIQPHHCDLTNM-DGVVTVTPRSMDAETYVDGQRIS--ETTMLQSGM   92 (107)
T ss_dssp             CCEEECCSEEEECSSSCCS-TTCCCC--CCT--TCCSSCEEEEES-SSCEEEEESCSSSCEEETSCBCS--SCEEECTTC
T ss_pred             CEEEEECCCCEEECCCCCC-CCCEEE--CCC--CEEEEEEEEEEC-CCCCEEECCCCCCCEEECCCCCC--CEEECCCCC
T ss_conf             4899979998799998789-984998--996--533219999972-46319952788863299520236--406999999


Q ss_pred             EEEECCEE-EEEEEC
Q ss_conf             37886908-999929
Q 003666          769 LIEIRGLA-FIFETN  782 (804)
Q Consensus       769 LIEIggi~-fiFllN  782 (804)
                      .|.||... |.|.-|
T Consensus        93 ~i~iG~~~~Frf~~P  107 (107)
T d1wlna1          93 RLQFGTSHVFKFVDP  107 (107)
T ss_dssp             EEEETTTEEEEEECS
T ss_pred             EEEECCCEEEEEECC
T ss_conf             999899629999594

>d2g1la1 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Kinesin-like protein kif1c
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.4e-08  Score=69.74  Aligned_cols=80  Identities=21%  Similarity=0.144  Sum_probs=64.2

Q ss_pred             CEEEEEECCEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECCC---CCEEEEECCC-CCEEECCEECCCCCCCCCC
Q ss_conf             31698433808967999999831004898997500021002225489---9599995234-9749786771999941369
Q 003666          690 HSKHYIKKPEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDEA---GSFHLKNLGK-CPILVNNKEVPPRQSQGLG  765 (804)
Q Consensus       690 ~~~YyIrs~eVtIGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~d---g~F~L~NlGK-n~I~VNGk~I~~G~~~~L~  765 (804)
                      ...|+++..+.+|||.    ..||-|  .+  ..|||+||+|....+   ..|+|..++. +++||||++|.  +++.|+
T Consensus        16 ~~~y~l~~~~~~iGr~----~~dI~l--~~--~~vs~~Ha~i~~~~~~~~~~~~i~d~~s~~gt~VNg~~i~--~~~~L~   85 (102)
T d2g1la1          16 CLLYHIKDGVTRVGQV----DMDIKL--TG--QFIREQHCLFRSIPQPDGEVVVTLEPCEGAETYVNGKLVT--EPLVLK   85 (102)
T ss_dssp             CCEEECCSEEEEEESS----SCSEEC--CC--TTCCSEEEEEEEEECTTSCEEEEEEECTTCCEEETTEECC--SCEECC
T ss_pred             EEEEECCCCCEECCCC----CCCEEE--CC--CCEEEEEEEEEEEECCCCCEEEEECCCCCCCEEECCEECC--CEEECC
T ss_conf             2999828985779999----747886--44--3111002699998868894799863898888089986926--516968


Q ss_pred             CCCEEEECCEE-EEE
Q ss_conf             99937886908-999
Q 003666          766 SSCLIEIRGLA-FIF  779 (804)
Q Consensus       766 sgsLIEIggi~-fiF  779 (804)
                      +|+.|.||... |+|
T Consensus        86 ~gD~I~~G~~~~frf  100 (102)
T d2g1la1          86 SGNRIVMGKNHVFRF  100 (102)
T ss_dssp             TTCEEEETTTEEEEE
T ss_pred             CCCEEEECCCEEEEE
T ss_conf             999999899889998

>d1dmza_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SMAD/FHA domain
superfamily: SMAD/FHA domain
family: FHA domain
domain: Phosphotyrosine binding domain of Rad53
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.70  E-value=2.3e-08  Score=68.42  Aligned_cols=96  Identities=20%  Similarity=0.247  Sum_probs=68.6

Q ss_pred             CCEEEEEEC-----CEEEEEEC--CEEEECCCCCCCCCCEECCCCCCCCCCHHHCEEEEECC--------------CCCE
Q ss_conf             613999844-----31698433--80896799999983100489899750002100222548--------------9959
Q 003666          681 GAFAILYGR-----HSKHYIKK--PEVLLGRATEDVVVDIDLGREGRTNKISRRQAMINMDE--------------AGSF  739 (804)
Q Consensus       681 ~AlAvL~Gr-----~~~YyIrs--~eVtIGR~T~~~~VDIDLs~EGpa~kISRrQA~Ikl~~--------------dg~F  739 (804)
                      +.|..|.-.     .-.+.+.+  ..++|||...   .||=+    ....|||+||+|.++.              ...+
T Consensus         3 ~~f~~L~~l~~~~~~~~i~i~~~~~~~~iGR~~~---~d~~i----~~~~vS~~H~~I~~~~~~~~~~~~~~~~~~~~~~   75 (158)
T d1dmza_           3 GRFLTLKPLPDSIIQESLEIQQGVNPFFIGRSED---CNCKI----EDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDI   75 (158)
T ss_dssp             SCCEEEEECTTSSCCCCEEETTSCSCEEEESSTT---SSEEC----CCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEE
T ss_pred             CEEEEEEECCCCCCCEEEEECCCCCCEEECCCCC---CCEEE----CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCE
T ss_conf             6169999816987530699716997679668867---66897----9876267616999951666420012344678738


Q ss_pred             EEEECCCCCEEECCEECCCCCCCCCCCCCEEEECC-------EEEEEEECH
Q ss_conf             99952349749786771999941369999378869-------089999294
Q 003666          740 HLKNLGKCPILVNNKEVPPRQSQGLGSSCLIEIRG-------LAFIFETNQ  783 (804)
Q Consensus       740 ~L~NlGKn~I~VNGk~I~~G~~~~L~sgsLIEIgg-------i~fiFllN~  783 (804)
                      ||..++.||+||||+.+.++.++.|++|+.|.|+.       +.|.+.++.
T Consensus        76 ~l~D~S~NGt~vN~~~~~~~~~~~l~~gD~i~~~~~~~~~~~i~f~~~~~~  126 (158)
T d1dmza_          76 WYCHTGTNVSYLNNNRMIQGTKFLLQDGDEIKIIWDKNNKFVIGFKVEIND  126 (158)
T ss_dssp             EEEECSTTCCEETTEECCSSEEEECCSSCCEESCCCTTTTCCCCEEEECSC
T ss_pred             EEEECCCCCEEECCEECCCCCEEECCCCCEEEECCCCCCCEEEEEEEEECC
T ss_conf             998568898089999937896088889999999248876468999998425