Citrus Sinensis ID: 003682
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 803 | 2.2.26 [Sep-21-2011] | |||||||
| O23617 | 862 | Alpha,alpha-trehalose-pho | yes | no | 0.975 | 0.908 | 0.826 | 0.0 | |
| Q94AH8 | 860 | Alpha,alpha-trehalose-pho | no | no | 0.978 | 0.913 | 0.748 | 0.0 | |
| Q9LRA7 | 867 | Probable alpha,alpha-treh | no | no | 0.975 | 0.903 | 0.665 | 0.0 | |
| Q9LMI0 | 851 | Probable alpha,alpha-treh | no | no | 0.965 | 0.910 | 0.673 | 0.0 | |
| Q0WUI9 | 856 | Probable alpha,alpha-treh | no | no | 0.967 | 0.907 | 0.649 | 0.0 | |
| O80738 | 861 | Probable alpha,alpha-treh | no | no | 0.975 | 0.909 | 0.640 | 0.0 | |
| Q9ZV48 | 862 | Probable alpha,alpha-treh | no | no | 0.972 | 0.906 | 0.624 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.886 | 0.971 | 0.338 | 1e-134 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.915 | 0.894 | 0.352 | 1e-126 | |
| Q9SYM4 | 942 | Alpha,alpha-trehalose-pho | no | no | 0.859 | 0.732 | 0.361 | 1e-125 |
| >sp|O23617|TPS5_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 1394 bits (3608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/785 (82%), Positives = 723/785 (92%), Gaps = 2/785 (0%)
Query: 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQ 60
+IIVGNQLP+++HR+S +G +FSWD DSLLLQLKDG+ ED+EV+Y+GC+KEQID EQ
Sbjct: 62 IIIVGNQLPIKSHRNS--AGKLSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTVEQ 119
Query: 61 DEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQA 120
D+VSQ LLE FKCVPA+IPPELF+K+YHGFCKQHLWPLFHYMLPL+PDLGGRFDRSLWQA
Sbjct: 120 DDVSQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLWQA 179
Query: 121 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 180
Y+SVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY
Sbjct: 180 YLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 239
Query: 181 RTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 240
RTLP+R+ELLRALLNADLIGFHTFDYARHFLSCCSRMLG+SYQSKRG IGLEY+GRTVSI
Sbjct: 240 RTLPVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTVSI 299
Query: 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 300
KILPVGIHI QLQS+LNLPET+ KVAEL+DQF Q V+LGVDDMDIFKGISLKLLAMEQL
Sbjct: 300 KILPVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAMEQL 359
Query: 301 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 360
L+Q+P KRG++VLVQIANPARGRG+DVQEVQSET ATV+RIN++FGRPGYQPVVLIDTPL
Sbjct: 360 LTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDTPL 419
Query: 361 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS 420
QF+ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGN KL+ T+GLDPS AK SMLVVS
Sbjct: 420 QFFERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPSAAKKSMLVVS 479
Query: 421 EFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 480
EF+GCSPSLSGAIRVNPWNIDAV EAMD AL VS+AEKQMRHEKH++YVSTHDVAYWARS
Sbjct: 480 EFIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWARS 539
Query: 481 FLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYD 540
F+QDLERAC DH+R+RCWGIGFGLGFRVVALDP+F+KLSI+HIVSAYKRTKNRAILLDYD
Sbjct: 540 FIQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLDYD 599
Query: 541 GTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 600
GT++ PGSI T+P E + IL+NL DPKN+V+LVSGKDR TL EWFSSC+ LG+ AEHG
Sbjct: 600 GTMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAEHG 659
Query: 601 YFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDF 660
YF+RPN G DWET V F WKQIAEPVM+LYTETTDGSTIETKE+ALVWN+Q+ADPDF
Sbjct: 660 YFIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADPDF 719
Query: 661 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFV 720
GSCQAKEL++HLESVL N+PVSVK+G +VEVKPQGVNKGLVA+ L TM +KG L DF+
Sbjct: 720 GSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQGVNKGLVAERLLTTMQEKGKLLDFI 779
Query: 721 LCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGL 780
LC+GDDRSDEDMFEVI SA GP+LSPVAE+FACTVGQKPSKAKYYLDDTAEI+RML GL
Sbjct: 780 LCVGDDRSDEDMFEVIMSAKDGPALSPVAEIFACTVGQKPSKAKYYLDDTAEIIRMLDGL 839
Query: 781 AEASA 785
A +
Sbjct: 840 AATNT 844
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|Q94AH8|TPS6_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1283 bits (3320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/802 (74%), Positives = 705/802 (87%), Gaps = 16/802 (1%)
Query: 1 MIIVGNQLPLRAHRSSDGS------------GGWTFSWDEDSLLLQLKDGLG-EDVEVIY 47
+IIV N+LP+RA R DG+ GW FSWDE+SLLLQLKDGLG E +EVIY
Sbjct: 55 IIIVANELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIY 114
Query: 48 VGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSP 107
VGC+KE+I L+EQ+EV Q LLE+FKCVP F+P +L++++YHGFCKQ LWPLFHYMLPLSP
Sbjct: 115 VGCLKEEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSP 174
Query: 108 DLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLG 167
DLGGRFDR+LWQAYVSVNKIFAD++MEVI+P+DDFVW+HDYHLMVLPTFLRKRFNRVKLG
Sbjct: 175 DLGGRFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLG 234
Query: 168 FFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRG 227
FFLHSPFPSSEIY+TLPIR+ELLRALLN+DLIGFHTFDYARHFLSCCSRMLG++Y+SKRG
Sbjct: 235 FFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRG 294
Query: 228 YIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMD 285
YIGLEY+GRTVSIKILPVGIH+GQLQSVL+LPETE KV EL +++ KG+ ++LGVDDMD
Sbjct: 295 YIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMD 354
Query: 286 IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIF 345
IFKGI+LKLLAMEQLL Q+P +GK+VLVQIANPARG+G+DV+E+Q+ET++TV+RIN+ F
Sbjct: 355 IFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETF 414
Query: 346 GRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTL 405
GRPGY P+VLID PL+FYER+AYYV+AECCLVTAVRDGMNLIPYEYI+ RQGNEKLD L
Sbjct: 415 GRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKIL 474
Query: 406 GLDPST-AKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEK 464
L+ + K SMLVVSEF+GCSPSLSGAIRVNPWN+DAVA+AMDSAL V++ EKQ+RHEK
Sbjct: 475 KLEANNRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEK 534
Query: 465 HYRYVSTHDVAYWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIV 524
HY+YVSTHDV YWARSFLQDLER+C +H RRRCWGIGFGL FRVVALD +FRKLS++HIV
Sbjct: 535 HYKYVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIV 594
Query: 525 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 584
SAYKRTK RAILLDYD T+M GSI P+++++ IL+ LCRD N+VF+VS K R+TL+
Sbjct: 595 SAYKRTKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLS 654
Query: 585 EWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIET 644
+WFS CE LGIAAEHGYF+R V+WE CV+ D SWKQIAEPVM+LYTETTDGSTIE
Sbjct: 655 DWFSPCEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIED 714
Query: 645 KESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQ 704
KE+ALVW+++ ADPDFGSCQAKELLDHLESVLANEPV+VK G N VEVKPQGV+KGL+A+
Sbjct: 715 KETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIAR 774
Query: 705 HQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAK 764
L M ++G LP+FVLCIGDDRSDEDMFEVI S+ GPS++P AE+FACTVGQKPSKAK
Sbjct: 775 RMLSMMQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKAK 834
Query: 765 YYLDDTAEILRMLLGLAEASAQ 786
YYLDDT EI+R++ GLA + Q
Sbjct: 835 YYLDDTTEIVRLMHGLASVTDQ 856
|
Regulates plant architecture, shape of epidermal pavement cells and branching of trichomes. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LRA7|TPS9_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana GN=TPS9 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1135 bits (2935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/784 (66%), Positives = 639/784 (81%), Gaps = 1/784 (0%)
Query: 2 IIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQD 61
IIV N LPL+A R ++ +G W FSWDEDSLLLQL+DG D E +Y+G + I +SEQ+
Sbjct: 62 IIVANMLPLQAKRDTE-TGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGISEQE 120
Query: 62 EVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAY 121
EVS LL F CVP F+P E+ KFY GFCK HLWPLFHYMLP+ PD G RFDR LWQAY
Sbjct: 121 EVSHKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLWQAY 180
Query: 122 VSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR 181
VS NKIF+D+VMEVI+P++D+VW+HDYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
Query: 182 TLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIK 241
TLP+RD+LLR LLN DLIGFHTFDYARHFLSCCSRMLG+ Y+SKRG+IGL+YFGRTV IK
Sbjct: 241 TLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIK 300
Query: 242 ILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLL 301
ILPVGIH+G+L+SVLNLP T AK+ E+Q+QFKG+ ++LGVDDMDIFKGISLKL+AME+L
Sbjct: 301 ILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAMERLF 360
Query: 302 SQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQ 361
RGK+VL+QI NPAR G+DV+E + ET++T +RIN+ +G GYQPV+LID +
Sbjct: 361 ETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILIDRLVP 420
Query: 362 FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE 421
YE+ AYY +A+CCLV AVRDGMNL+PY+YIICRQG +D +G+ +A++SMLVVSE
Sbjct: 421 RYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSARTSMLVVSE 480
Query: 422 FVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSF 481
F+GCSPSLSGAIRVNPW++DAVAEA++ AL + + EK++RHEKHY YVSTHDV YWA+SF
Sbjct: 481 FIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSF 540
Query: 482 LQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDG 541
+QDLERACR+H +RCWGIGFGL FRV++L P+FRKLSIDHIVS Y+ T+ RAI LDYDG
Sbjct: 541 MQDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLDYDG 600
Query: 542 TIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGY 601
T++ SI +PNAE +++L +LC DPKN VF+VSG+ ++L++W S CE LGIAAEHGY
Sbjct: 601 TLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAEHGY 660
Query: 602 FVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFG 661
F+R + +WETC S + WK + EPVM+ Y + TDGSTIE KESALVW+ Q ADPDFG
Sbjct: 661 FIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADPDFG 720
Query: 662 SCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVL 721
+CQAKELLDHLESVLANEPV VK G +IVEVKPQGV+KGL + + M + G PD V+
Sbjct: 721 ACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAVEKVIHQMVEDGNPPDMVM 780
Query: 722 CIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLA 781
CIGDDRSDEDMFE I S P L E+FACTVG+KPSKAKY+LDD +++L++L GLA
Sbjct: 781 CIGDDRSDEDMFESILSTVTNPDLPMPPEIFACTVGRKPSKAKYFLDDVSDVLKLLGGLA 840
Query: 782 EASA 785
A++
Sbjct: 841 AATS 844
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LMI0|TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/786 (67%), Positives = 641/786 (81%), Gaps = 11/786 (1%)
Query: 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQ 60
MIIV N+LPL+A + + G W+FSWD+DSL LQLKDGL ED+E++YVG + +D +EQ
Sbjct: 61 MIIVANRLPLKAEKRN---GSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNEQ 117
Query: 61 DEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQA 120
D+V+Q LL+ FKCVP F PP+L SKFY GFCK+ +WPLFHYMLP S D GGRFDRSLW+A
Sbjct: 118 DDVAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWEA 177
Query: 121 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 180
YV+ NK+F KV+EVI+PDDDFVW+HDYHLMVLPTFLR+RFNR+++GFFLHSPFPSSEIY
Sbjct: 178 YVATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEIY 237
Query: 181 RTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 240
R+LP+R+E+L+ALLN+DLIGFHTFDYARHFL+CCSRMLG+ YQSKRGYIGLEY+GRTV I
Sbjct: 238 RSLPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVGI 297
Query: 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 300
KI+PVGI++G++QSV+ E E KV EL+++F+G+ V+LG+DDMDIFKGI+LKLLAMEQ+
Sbjct: 298 KIMPVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQM 357
Query: 301 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 360
L Q+P+ RG+ VLVQI NPARG+G DV+E++ E + RRIN FG+PGYQP++ IDTP+
Sbjct: 358 LRQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTPV 417
Query: 361 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLG--LDPSTAKSSMLV 418
E AYY IAEC +VTAVRDGMNL PYEYI+CRQG LG D S K SMLV
Sbjct: 418 SINEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQG------LLGSESDFSGPKKSMLV 471
Query: 419 VSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWA 478
SEF+GCSPSLSGAIRVNPWN++A EA++ AL +SDAEKQ+RHEKH+RYVSTHDVAYW+
Sbjct: 472 ASEFIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWS 531
Query: 479 RSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLD 538
RSFLQDLER C DH ++RCWG+G GFRVVALDPNFRKLSI IVS YKR K+RAILLD
Sbjct: 532 RSFLQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLD 591
Query: 539 YDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAE 598
YDGT+M SI+ +P+ E + LD LC D KN +F+VSG+ R++L++WF+ C+ +GIAAE
Sbjct: 592 YDGTLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAE 651
Query: 599 HGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADP 658
HGYF++ + +WETC DF W QI EPVMK YTE+TDGS+IE KESALVW ++ ADP
Sbjct: 652 HGYFLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADP 711
Query: 659 DFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPD 718
FGS QAKE+L+HLESVLANEPV+VKSG IVEVKPQGV+KG V++ +M KG D
Sbjct: 712 GFGSLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGKGKPVD 771
Query: 719 FVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLL 778
FVLCIGDDRSDEDMFE I +A + L A VFACTVGQKPSKAKYYLDDT E+ ML
Sbjct: 772 FVLCIGDDRSDEDMFEAIGNAMSKRLLCDNALVFACTVGQKPSKAKYYLDDTTEVTCMLE 831
Query: 779 GLAEAS 784
LAEAS
Sbjct: 832 SLAEAS 837
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q0WUI9|TPS8_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 OS=Arabidopsis thaliana GN=TPS8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/781 (64%), Positives = 618/781 (79%), Gaps = 4/781 (0%)
Query: 2 IIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQD 61
IIV N LPL++ R ++ +G W F+WDEDSL LQL+DG + E +YVG + I+ +EQ+
Sbjct: 60 IIVANMLPLQSKRDAE-TGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNEQE 118
Query: 62 EVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAY 121
EVSQ LLE F CV F+ EL FY GFCK LWPLFHYMLP+ PD G RFDR LWQAY
Sbjct: 119 EVSQKLLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQAY 178
Query: 122 VSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR 181
VS NKIF+D+VMEVI+P+DD+VW+ DYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSEIYR
Sbjct: 179 VSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 238
Query: 182 TLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIK 241
TLP+RDE+LR LLN DLIGFHTFDYARHFLSCCSRMLG+ Y+SKRG+IGL+YFGRTV IK
Sbjct: 239 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 298
Query: 242 ILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLL 301
ILPVG+H+G+L+SVL+L T AK E+Q+QFKG+ ++LG+DDMDIFKGISLKL+AME L
Sbjct: 299 ILPVGVHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEHLF 358
Query: 302 SQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQ 361
+GK+VLVQI NPAR G+DV+E + ET+ T RRIN+ +G Y+P+VLID +
Sbjct: 359 ETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRLVP 418
Query: 362 FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE 421
E+ AYY A+CCLV AVRDGMNL+PY+YI+CRQG + P T S LVVSE
Sbjct: 419 RSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQGTRSNKAVVDSSPRT---STLVVSE 475
Query: 422 FVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSF 481
F+GCSPSLSGAIRVNPW++DAVAEA++SAL +S+ EKQ+RHEKHY Y+STHDV YWA+SF
Sbjct: 476 FIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSF 535
Query: 482 LQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDG 541
+QDLERACRDH +RCWGIGFGLGFRV++L P+FRKLS++HIV Y++T+ RAI LDYDG
Sbjct: 536 MQDLERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDG 595
Query: 542 TIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGY 601
T++ SI P+ E V++L LC DP N VF+VSG+ R++L+ W S CE LGIAAEHGY
Sbjct: 596 TLVPESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGY 655
Query: 602 FVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFG 661
F+R +WETC S D W+ + EPVM+ Y E TDG++IE KESALVW+ Q ADPDFG
Sbjct: 656 FIRWKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFG 715
Query: 662 SCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVL 721
SCQAKE+LDHLESVLANEPV VK G +IVEVKPQGV+KGL A+ + M ++G P+ V+
Sbjct: 716 SCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAAEKVIREMVERGEPPEMVM 775
Query: 722 CIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLA 781
CIGDDRSDEDMFE I S P L EVFACTVG+KPSKAKY+LDD A++L++L GL
Sbjct: 776 CIGDDRSDEDMFESILSTVTNPELLVQPEVFACTVGRKPSKAKYFLDDEADVLKLLRGLG 835
Query: 782 E 782
+
Sbjct: 836 D 836
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O80738|TPS10_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/784 (64%), Positives = 622/784 (79%), Gaps = 1/784 (0%)
Query: 2 IIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQD 61
IIV N LPL + S+ +G W FS D DS LL LKDG + EVIYVG +K +D+SEQD
Sbjct: 62 IIVANFLPLNGKKDSE-TGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSEQD 120
Query: 62 EVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAY 121
EVS L E F CV F+P ++ KFY GFCKQ LWPLFHYMLP+ PD G RFDR LWQAY
Sbjct: 121 EVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQAY 180
Query: 122 VSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR 181
VS NKIFADKVM VI+ ++D++W+HDYHLMVLPTFLR+RF+RVKLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
Query: 182 TLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIK 241
TLP+R+ELLR LLN DLIGFHTFDYARHFLSCC RMLG+ Y+SKRG+I L+Y GRTV +K
Sbjct: 241 TLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVFLK 300
Query: 242 ILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLL 301
ILP+GIH+G+L+SVLNLP T K+ E+Q++++G+ ++LGVDDMDIFKG+SLK+LA E LL
Sbjct: 301 ILPIGIHMGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEHLL 360
Query: 302 SQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQ 361
Q PS GKIVL+QI NPARG G+DVQE + ET+ TV+RIN+ +G Y+PVVLID P+
Sbjct: 361 QQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRPVP 420
Query: 362 FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE 421
+E+ AYY +AECC+V AVRDGMNL+PY+Y +CRQG ++ +LG+ ++S LV+SE
Sbjct: 421 RFEKSAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLPRTSTLVLSE 480
Query: 422 FVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSF 481
F+GCSPSLSGAIRVNPW++DAVA+++ SA+ +SD EKQ+RH+KH+ Y+STHDV YWARSF
Sbjct: 481 FIGCSPSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWARSF 540
Query: 482 LQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDG 541
QDLERA RDH +RCWG+G+GLGFR+VAL PNFR+LSI+ VSAY+R+ RAI LDYDG
Sbjct: 541 SQDLERASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDYDG 600
Query: 542 TIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGY 601
T++ SI P+AE ++ L LC DP N +F+VSG+ + +L+EW + CE LGIAAEHGY
Sbjct: 601 TLVPETSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEHGY 660
Query: 602 FVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFG 661
F R N DWET D WK++ EP+M+LYTETTDGS IE KESALVW+ Q ADPDFG
Sbjct: 661 FTRWNKSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPDFG 720
Query: 662 SCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVL 721
SCQAKELLDHLE+VL NEPV V G IVEVKPQGV+KGLV L M + G+ PDFV+
Sbjct: 721 SCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQGVSKGLVTGKILSRMLEDGIAPDFVV 780
Query: 722 CIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLA 781
CIGDDRSDE+MFE I + + S S E+FACTVG+KPSKAKY+LD+ ++++++L GLA
Sbjct: 781 CIGDDRSDEEMFENISTTLSAQSSSMSTEIFACTVGRKPSKAKYFLDEVSDVVKLLQGLA 840
Query: 782 EASA 785
S+
Sbjct: 841 NTSS 844
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9ZV48|TPS11_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana GN=TPS11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1045 bits (2703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/785 (62%), Positives = 610/785 (77%), Gaps = 4/785 (0%)
Query: 2 IIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQD 61
I+V NQLPLRAHR S W F +D DSL LQLKDG + EV+YVG + + SEQ+
Sbjct: 53 IVVSNQLPLRAHRDI-SSNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQE 111
Query: 62 EVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAY 121
+VSQ LLE F+CVP F+P +L +K+YHGFCK +LWP+FHY+LP++ G FDRS W+AY
Sbjct: 112 DVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNWRAY 171
Query: 122 VSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR 181
+VNKIFADK+ EV++PDDD+VW+HDYHLM+LPTFLR RF+R+KLG FLHSPFPSSEIYR
Sbjct: 172 TTVNKIFADKIFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSEIYR 231
Query: 182 TLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIK 241
TLP+RDE+L+ LN DL+GFHTFDYARHFLSCCSRMLG+ Y+SKRGYIGLEYFGRTVSIK
Sbjct: 232 TLPVRDEILKGFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSIK 291
Query: 242 ILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLL 301
ILPVGIH+GQ++S+ +T KV L+++FKG IVMLGVDD+D+FKGISLK AM QLL
Sbjct: 292 ILPVGIHMGQIESIKASEKTAEKVKRLRERFKGNIVMLGVDDLDMFKGISLKFWAMGQLL 351
Query: 302 SQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRP-GYQPVVLIDTPL 360
QN RGK+VLVQI NPAR G+DVQ+V+ + + IN FGRP GY+P+V I+ P+
Sbjct: 352 EQNEELRGKVVLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFINGPV 411
Query: 361 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS 420
+++AYY I+EC +V AVRDGMNL+PY+Y + RQG+ LD LG + S+++VS
Sbjct: 412 STLDKVAYYAISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDDVRKSVIIVS 471
Query: 421 EFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 480
EF+GCSPSLSGAIRVNPWNIDAV AM SA+ +SD EK +RH+KH++Y+S+H+VAYWARS
Sbjct: 472 EFIGCSPSLSGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSHNVAYWARS 531
Query: 481 FLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYD 540
+ QDL+RAC+DH +R WG+GFGL F+VVALDPNFR+L + IV AY+R+ +R ILLDYD
Sbjct: 532 YDQDLQRACKDHYNKRFWGVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSSRLILLDYD 591
Query: 541 GTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 600
GT+M ++ P+ + +++L+ LC DP N+VF+VSG+ +D L++WF SC LGI+AEHG
Sbjct: 592 GTMMDQDTLDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPNLGISAEHG 651
Query: 601 YFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDF 660
YF R N WET D SWK+IA+PVM Y E TDGS IE KESA+VW+ Q AD F
Sbjct: 652 YFTRWNSNSPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEADHSF 711
Query: 661 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETM-HQKGMLPDF 719
GS QAKELLDHLESVL NEPV VK G +IVEVKPQGV+KG V +H + TM + KG PDF
Sbjct: 712 GSWQAKELLDHLESVLTNEPVVVKRGQHIVEVKPQGVSKGKVVEHLIATMRNTKGKRPDF 771
Query: 720 VLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLG 779
+LCIGDDRSDEDMF+ I S+ + EVFACTVGQKPSKAKYYLDDT +++ML
Sbjct: 772 LLCIGDDRSDEDMFDSIVKHQDVSSIG-LEEVFACTVGQKPSKAKYYLDDTPSVIKMLEW 830
Query: 780 LAEAS 784
LA AS
Sbjct: 831 LASAS 835
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 481 bits (1237), Expect = e-134, Method: Compositional matrix adjust.
Identities = 265/783 (33%), Positives = 433/783 (55%), Gaps = 71/783 (9%)
Query: 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQ 60
+I+V N+LP+ + S+G W+ L+ L G I+VG I +I+ ++
Sbjct: 18 LIVVSNRLPVSIKKESNGK--WSCKMSSGGLVAALS---GLKSNFIWVGWIGAEIEEDDR 72
Query: 61 DEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQA 120
E+ + L + + C+P F+ ++ ++ Y+GF LWPLFHY LP D +D +W +
Sbjct: 73 KEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHY-LPGDLD----YDDRIWNS 127
Query: 121 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 180
YV N+ F+ V E++ P+D VWVHDYH+M+LP L+++ ++GFFLH PFPSSEI+
Sbjct: 128 YVEANEQFSSVVAEILKPND-LVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFPSSEIF 186
Query: 181 RTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 240
R LP R E+L +LN LIGFHT+DYARHFL C+R++G+ G+ + R V +
Sbjct: 187 RVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN----GVYFKDRFVQV 242
Query: 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 300
+ PVGI + L + + ++ EL++ F+G V++G+D +D KGI KL A+E+L
Sbjct: 243 GVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQAIERL 302
Query: 301 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 360
+ P +GK+VL+Q+A P+R + Q+++ E V RIN ++G GY P+ + +
Sbjct: 303 FQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHYLFQSV 362
Query: 361 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS 420
E A Y I++ L+T++RDGMNL+ EYI+C+ T + +L++S
Sbjct: 363 DPSELTALYNISDAALITSIRDGMNLVAQEYIVCQ---------------TENNGVLILS 407
Query: 421 EFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 480
EF G + SLSGA+ +NPWN + VA+++ ++L + E++ +H+ +YV+ H ++W
Sbjct: 408 EFTGAAQSLSGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTASHWGLG 467
Query: 481 FLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYD 540
F+++L +A + + +KL I+ +V YK++K R ++ YD
Sbjct: 468 FVKELNKASSNTDKMVT-----------------IQKLDIEKVVDIYKQSKRRLLIFAYD 510
Query: 541 GTIMVPGSIS--TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAE 598
GT++ ++ + P+ E + D L DPK V+++SG+D+ TL+EWF + +G++AE
Sbjct: 511 GTLIPYNNVPQLSRPSQELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQ-IGLSAE 569
Query: 599 HGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADP 658
+G F + +WE V D SWK+ P+ K +T T GS E KE W+++ ADP
Sbjct: 570 YGCFFKLPESTEWEQQVPSMDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHYRNADP 629
Query: 659 DFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPD 718
FGS QA+EL HL+ N P+ V G + V+ +N + + KG+ D
Sbjct: 630 IFGSIQARELHLHLD----NLPLDVIVGDKTLGVRSYNINPLSSMKKVITDTIPKGL--D 683
Query: 719 FVLCIGDDRSDEDMFEVIKSAAAGPSLSPV--AEVFACTVGQKPSKAKYYLDDTAEILRM 776
+L IGD PS P ++F +VG+K K Y+L D AE+ +
Sbjct: 684 LILLIGD-------------THIHPSELPTFDGKIFNISVGKKSVKDSYHLSDPAEVNYL 730
Query: 777 LLG 779
++
Sbjct: 731 IIN 733
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust.
Identities = 284/805 (35%), Positives = 436/805 (54%), Gaps = 70/805 (8%)
Query: 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQI-DLSE 59
+++V N+LP+ A R+ G W+ L+ L G+ + +VG + D E
Sbjct: 14 LLVVANRLPVSAKRT--GENSWSLEMSPGGLVSGLL-GITSQFDTKWVGWPGVDVHDEIE 70
Query: 60 QDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYM-LPLSP--DLGGRFDRS 116
++ ++++L E KC+P F+ +F ++Y+G+C LWP+ H+M LP D F+ +
Sbjct: 71 KNALTESLAE-MKCIPVFLNG-VFDQYYNGYCNGILWPILHHMGLPQEDQHDTNQTFE-T 127
Query: 117 LWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 176
+ AY N++F D +++ + D VW HDYHLM LP +L++ N++K+G+FLHSPFPS
Sbjct: 128 QYDAYKKANRMFLDVIIDNYE-EGDIVWCHDYHLMFLPQYLKEYNNKIKVGWFLHSPFPS 186
Query: 177 SEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGR 236
SE+Y+TLP R ELLRA+L ADL+GFHT+D+ARHFLS C+R+LGV + G+ Y GR
Sbjct: 187 SEVYKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGVEGTHE----GVVYQGR 242
Query: 237 TVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLA 296
+ + P+GI + LPE ++ ELQ++F G+ V+LGVD +D+ KGI K LA
Sbjct: 243 VTRVAVFPIGIDPDRFIRTCKLPEVTQQMNELQEKFAGKKVILGVDRLDMIKGIPQKYLA 302
Query: 297 MEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLI 356
E+ L +NP R K+VLVQIA P R + ++++S+ H V RIN FG P+ +
Sbjct: 303 FEKFLEENPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGSVSSLPIHHL 362
Query: 357 DTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSM 416
D + F A Y IA+ LVT++RDGMNL+ YE++ C++ AK +
Sbjct: 363 DCSVDFNYLCAIYAIADVMLVTSLRDGMNLVSYEFVACQE---------------AKKGV 407
Query: 417 LVVSEFVGCSPSLS-GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVA 475
LV+SEF G SL GA+ VNPW++ V+ A+ AL + E++ RH +++YV TH
Sbjct: 408 LVLSEFAGAGQSLGVGALIVNPWDVTEVSSAIKEALNMPAEERETRHRSNFQYVCTHSAE 467
Query: 476 YWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAI 535
W F+ +L + + R + L +L ++ Y ++ NR I
Sbjct: 468 KWGLDFMSELNGIIPESE----------MQMRKIPL-----QLPEQDVIQQYSQSNNRLI 512
Query: 536 LLDYDGTIMVPGSISTSP-----NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590
+L + GT+ P + T N E L LC DPK V ++S ++ L + F
Sbjct: 513 ILGFFGTLAEPMNSGTKEMDLKLNPELKGTLKALCNDPKTTVVVLSRSGKNILNKNFGES 572
Query: 591 EGLGIAAEHGYFVRPNYGVDWETCVSVP---DFSWKQIAEPVMKLYTETTDGSTIETKES 647
+ +AAE+G F + G +W T ++P + W + V K +T+ T S E E+
Sbjct: 573 -NIWLAAENGMFEKQTTG-EWVT--NMPQNVNLDWVDGVKNVFKYFTDRTPRSYFEASET 628
Query: 648 ALVWNFQYADPDFGSCQAKELLDHL-ESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQ 706
+LVWN++YAD +FG QA++LL +L ++N V V G + VEV G KG
Sbjct: 629 SLVWNYEYADVEFGRAQARDLLQYLWAGPISNASVDVVRGNHSVEVHAIGETKGAAIGRI 688
Query: 707 L-ETMHQKGMLP--DFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVA------EVFACTV 756
L E +H+K M DFV C G DED++ +S S SP F+ +
Sbjct: 689 LGEIVHRKSMTTPIDFVFCSGYFLEKDEDIYTFFESKILS-SKSPNGLDLKKENYFSAAI 747
Query: 757 GQKPSKAKYYLDDTAEILRMLLGLA 781
GQ +KA+Y +D ++ +L LA
Sbjct: 748 GQARTKARYVIDSAHGVVDLLHKLA 772
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SYM4|TPS1_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 273/755 (36%), Positives = 416/755 (55%), Gaps = 65/755 (8%)
Query: 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLG-EDVEVIYVGCIKEQI-DLS 58
+++V N+LP+ A R G W+ L+ L LG ++ E ++G + D
Sbjct: 94 LLVVANRLPVSAVRR--GEDSWSLEISAGGLVSAL---LGVKEFEARWIGWAGVNVPDEV 148
Query: 59 EQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYM-LPLSPDLGG-RFDRS 116
Q +S+ L E +C+P F+ E+ ++Y+G+C LWPLFHY+ LP L R +S
Sbjct: 149 GQKALSKALAEK-RCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQS 207
Query: 117 LWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 176
+ AY N++FAD V E + D VW HDYHLM LP L++ +++K+G+FLH+PFPS
Sbjct: 208 QFAAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHTPFPS 266
Query: 177 SEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGR 236
SEI+RTLP R ELLR++L ADL+GFHT+DYARHF+S C+R+LG+ + G+E GR
Sbjct: 267 SEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVEDQGR 322
Query: 237 TVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLA 296
+ P+GI + L +PE + EL+++F G+ VMLGVD +D+ KGI K+LA
Sbjct: 323 LTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERFAGRKVMLGVDRLDMIKGIPQKILA 382
Query: 297 MEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLI 356
E+ L +N + R K+VL+QIA P R + Q++ S+ H V RIN FG P+ +
Sbjct: 383 FEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHL 442
Query: 357 DTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSM 416
D L F+ A Y + + LVT++RDGMNL+ YE++ C++ AK +
Sbjct: 443 DRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQE---------------AKKGV 487
Query: 417 LVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVA 475
L++SEF G + SL +GAI VNPWNI VA ++ AL ++ E++ RH ++ +V TH
Sbjct: 488 LILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRHNFHHVKTHTAQ 547
Query: 476 YWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAI 535
WA +F+ +L + R+ + P +L + Y ++ NR +
Sbjct: 548 EWAETFVSELNDTVIEAQ------------LRISKVPP---ELPQHDAIQRYSKSNNRLL 592
Query: 536 LLDYDGTIMVP-----------GSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 584
+L ++ T+ P + + + E L LC DP + ++SG R L
Sbjct: 593 ILGFNATLTEPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSRSVLD 652
Query: 585 EWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVP-DFSWKQIAEPVMKLYTETTDGSTIE 643
+ F + + +AAE+G F+R G +W T + + W + V K +TE T S E
Sbjct: 653 KNFGEYD-MWLAAENGMFLRLTNG-EWMTTMPEHLNMEWVDSVKHVFKYFTERTPRSHFE 710
Query: 644 TKESALVWNFQYADPDFGSCQAKELLDHL-ESVLANEPVSVKSGPNIVEVKPQGVNKGLV 702
T++++L+WN++YAD +FG QA++LL HL ++N V V G VEV+ GV KG
Sbjct: 711 TRDTSLIWNYKYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVRAVGVTKGAA 770
Query: 703 AQHQL-ETMHQKGMLP--DFVLCIGDD-RSDEDMF 733
L E +H K M D+VLCIG DED++
Sbjct: 771 IDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDVY 805
|
Required for normal embryo development, vegetative growth and transition to flowering. Regulates embryo growth, cell wall deposition, starch and sucrose degradation, but not cell differentiation. Involved in the regulation of glucose sensing and signaling genes during plant development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 803 | ||||||
| TAIR|locus:2129425 | 862 | TPS5 "trehalose phosphatase/sy | 0.970 | 0.903 | 0.830 | 0.0 | |
| TAIR|locus:2200216 | 860 | ATTPS6 [Arabidopsis thaliana ( | 0.978 | 0.913 | 0.748 | 0.0 | |
| TAIR|locus:2199847 | 867 | TPS9 "trehalose-phosphatase/sy | 0.975 | 0.903 | 0.665 | 1e-299 | |
| TAIR|locus:2202290 | 851 | TPS7 "trehalose-phosphatase/sy | 0.965 | 0.910 | 0.673 | 1.4e-295 | |
| TAIR|locus:2016179 | 856 | TPS8 "trehalose-6-phosphatase | 0.971 | 0.911 | 0.647 | 1.7e-288 | |
| TAIR|locus:2195678 | 861 | TPS10 "trehalose phosphate syn | 0.975 | 0.909 | 0.640 | 3.2e-287 | |
| TAIR|locus:2054027 | 862 | TPS11 "trehalose phosphatase/s | 0.972 | 0.906 | 0.624 | 7.7e-277 | |
| DICTYBASE|DDB_G0284975 | 790 | tpsB "alpha,alpha-trehalose-ph | 0.529 | 0.537 | 0.356 | 1.5e-125 | |
| TAIR|locus:2137712 | 795 | TPS4 "trehalose-6-phosphatase | 0.821 | 0.830 | 0.341 | 3.5e-107 | |
| ASPGD|ASPL0000037859 | 908 | orlA [Emericella nidulans (tax | 0.419 | 0.371 | 0.352 | 1.6e-105 |
| TAIR|locus:2129425 TPS5 "trehalose phosphatase/synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3501 (1237.5 bits), Expect = 0., P = 0.
Identities = 649/781 (83%), Positives = 722/781 (92%)
Query: 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQ 60
+IIVGNQLP+++HR+S +G +FSWD DSLLLQLKDG+ ED+EV+Y+GC+KEQID EQ
Sbjct: 62 IIIVGNQLPIKSHRNS--AGKLSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTVEQ 119
Query: 61 DEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQA 120
D+VSQ LLE FKCVPA+IPPELF+K+YHGFCKQHLWPLFHYMLPL+PDLGGRFDRSLWQA
Sbjct: 120 DDVSQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLWQA 179
Query: 121 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 180
Y+SVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY
Sbjct: 180 YLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 239
Query: 181 RTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 240
RTLP+R+ELLRALLNADLIGFHTFDYARHFLSCCSRMLG+SYQSKRG IGLEY+GRTVSI
Sbjct: 240 RTLPVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTVSI 299
Query: 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 300
KILPVGIHI QLQS+LNLPET+ KVAEL+DQF Q V+LGVDDMDIFKGISLKLLAMEQL
Sbjct: 300 KILPVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAMEQL 359
Query: 301 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 360
L+Q+P KRG++VLVQIANPARGRG+DVQEVQSET ATV+RIN++FGRPGYQPVVLIDTPL
Sbjct: 360 LTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDTPL 419
Query: 361 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS 420
QF+ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGN KL+ T+GLDPS AK SMLVVS
Sbjct: 420 QFFERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPSAAKKSMLVVS 479
Query: 421 EFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 480
EF+GCSPSLSGAIRVNPWNIDAV EAMD AL VS+AEKQMRHEKH++YVSTHDVAYWARS
Sbjct: 480 EFIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWARS 539
Query: 481 FLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYD 540
F+QDLERAC DH+R+RCWGIGFGLGFRVVALDP+F+KLSI+HIVSAYKRTKNRAILLDYD
Sbjct: 540 FIQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLDYD 599
Query: 541 GTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 600
GT++ PGSI T+P E + IL+NL DPKN+V+LVSGKDR TL EWFSSC+ LG+ AEHG
Sbjct: 600 GTMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAEHG 659
Query: 601 YFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDF 660
YF+RPN G DWET V F WKQIAEPVM+LYTETTDGSTIETKE+ALVWN+Q+ADPDF
Sbjct: 660 YFIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADPDF 719
Query: 661 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFV 720
GSCQAKEL++HLESVL N+PVSVK+G +VEVKPQGVNKGLVA+ L TM +KG L DF+
Sbjct: 720 GSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQGVNKGLVAERLLTTMQEKGKLLDFI 779
Query: 721 LCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGL 780
LC+GDDRSDEDMFEVI SA GP+LSPVAE+FACTVGQKPSKAKYYLDDTAEI+RML GL
Sbjct: 780 LCVGDDRSDEDMFEVIMSAKDGPALSPVAEIFACTVGQKPSKAKYYLDDTAEIIRMLDGL 839
Query: 781 A 781
A
Sbjct: 840 A 840
|
|
| TAIR|locus:2200216 ATTPS6 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3239 (1145.2 bits), Expect = 0., P = 0.
Identities = 600/802 (74%), Positives = 707/802 (88%)
Query: 1 MIIVGNQLPLRAHRSSDGSG------------GWTFSWDEDSLLLQLKDGLGED-VEVIY 47
+IIV N+LP+RA R DG+G GW FSWDE+SLLLQLKDGLG++ +EVIY
Sbjct: 55 IIIVANELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIY 114
Query: 48 VGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSP 107
VGC+KE+I L+EQ+EV Q LLE+FKCVP F+P +L++++YHGFCKQ LWPLFHYMLPLSP
Sbjct: 115 VGCLKEEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSP 174
Query: 108 DLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLG 167
DLGGRFDR+LWQAYVSVNKIFAD++MEVI+P+DDFVW+HDYHLMVLPTFLRKRFNRVKLG
Sbjct: 175 DLGGRFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLG 234
Query: 168 FFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRG 227
FFLHSPFPSSEIY+TLPIR+ELLRALLN+DLIGFHTFDYARHFLSCCSRMLG++Y+SKRG
Sbjct: 235 FFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRG 294
Query: 228 YIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMD 285
YIGLEY+GRTVSIKILPVGIH+GQLQSVL+LPETE KV EL +++ KG+ ++LGVDDMD
Sbjct: 295 YIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMD 354
Query: 286 IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIF 345
IFKGI+LKLLAMEQLL Q+P +GK+VLVQIANPARG+G+DV+E+Q+ET++TV+RIN+ F
Sbjct: 355 IFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETF 414
Query: 346 GRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTL 405
GRPGY P+VLID PL+FYER+AYYV+AECCLVTAVRDGMNLIPYEYI+ RQGNEKLD L
Sbjct: 415 GRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKIL 474
Query: 406 GLDPSTA-KSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEK 464
L+ + K SMLVVSEF+GCSPSLSGAIRVNPWN+DAVA+AMDSAL V++ EKQ+RHEK
Sbjct: 475 KLEANNRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEK 534
Query: 465 HYRYVSTHDVAYWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIV 524
HY+YVSTHDV YWARSFLQDLER+C +H RRRCWGIGFGL FRVVALD +FRKLS++HIV
Sbjct: 535 HYKYVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIV 594
Query: 525 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 584
SAYKRTK RAILLDYD T+M GSI P+++++ IL+ LCRD N+VF+VS K R+TL+
Sbjct: 595 SAYKRTKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLS 654
Query: 585 EWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIET 644
+WFS CE LGIAAEHGYF+R V+WE CV+ D SWKQIAEPVM+LYTETTDGSTIE
Sbjct: 655 DWFSPCEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIED 714
Query: 645 KESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQ 704
KE+ALVW+++ ADPDFGSCQAKELLDHLESVLANEPV+VK G N VEVKPQGV+KGL+A+
Sbjct: 715 KETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGVSKGLIAR 774
Query: 705 HQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAK 764
L M ++G LP+FVLCIGDDRSDEDMFEVI S+ GPS++P AE+FACTVGQKPSKAK
Sbjct: 775 RMLSMMQERGTLPEFVLCIGDDRSDEDMFEVICSSTEGPSIAPRAEIFACTVGQKPSKAK 834
Query: 765 YYLDDTAEILRMLLGLAEASAQ 786
YYLDDT EI+R++ GLA + Q
Sbjct: 835 YYLDDTTEIVRLMHGLASVTDQ 856
|
|
| TAIR|locus:2199847 TPS9 "trehalose-phosphatase/synthase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2877 (1017.8 bits), Expect = 1.0e-299, P = 1.0e-299
Identities = 522/784 (66%), Positives = 639/784 (81%)
Query: 2 IIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQD 61
IIV N LPL+A R ++ +G W FSWDEDSLLLQL+DG D E +Y+G + I +SEQ+
Sbjct: 62 IIVANMLPLQAKRDTE-TGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGISEQE 120
Query: 62 EVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAY 121
EVS LL F CVP F+P E+ KFY GFCK HLWPLFHYMLP+ PD G RFDR LWQAY
Sbjct: 121 EVSHKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLWQAY 180
Query: 122 VSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR 181
VS NKIF+D+VMEVI+P++D+VW+HDYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
Query: 182 TLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIK 241
TLP+RD+LLR LLN DLIGFHTFDYARHFLSCCSRMLG+ Y+SKRG+IGL+YFGRTV IK
Sbjct: 241 TLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIK 300
Query: 242 ILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLL 301
ILPVGIH+G+L+SVLNLP T AK+ E+Q+QFKG+ ++LGVDDMDIFKGISLKL+AME+L
Sbjct: 301 ILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAMERLF 360
Query: 302 SQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQ 361
RGK+VL+QI NPAR G+DV+E + ET++T +RIN+ +G GYQPV+LID +
Sbjct: 361 ETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILIDRLVP 420
Query: 362 FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE 421
YE+ AYY +A+CCLV AVRDGMNL+PY+YIICRQG +D +G+ +A++SMLVVSE
Sbjct: 421 RYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSARTSMLVVSE 480
Query: 422 FVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSF 481
F+GCSPSLSGAIRVNPW++DAVAEA++ AL + + EK++RHEKHY YVSTHDV YWA+SF
Sbjct: 481 FIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSF 540
Query: 482 LQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDG 541
+QDLERACR+H +RCWGIGFGL FRV++L P+FRKLSIDHIVS Y+ T+ RAI LDYDG
Sbjct: 541 MQDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLDYDG 600
Query: 542 TIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGY 601
T++ SI +PNAE +++L +LC DPKN VF+VSG+ ++L++W S CE LGIAAEHGY
Sbjct: 601 TLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAEHGY 660
Query: 602 FVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFG 661
F+R + +WETC S + WK + EPVM+ Y + TDGSTIE KESALVW+ Q ADPDFG
Sbjct: 661 FIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADPDFG 720
Query: 662 SCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVL 721
+CQAKELLDHLESVLANEPV VK G +IVEVKPQGV+KGL + + M + G PD V+
Sbjct: 721 ACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAVEKVIHQMVEDGNPPDMVM 780
Query: 722 CIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLA 781
CIGDDRSDEDMFE I S P L E+FACTVG+KPSKAKY+LDD +++L++L GLA
Sbjct: 781 CIGDDRSDEDMFESILSTVTNPDLPMPPEIFACTVGRKPSKAKYFLDDVSDVLKLLGGLA 840
Query: 782 EASA 785
A++
Sbjct: 841 AATS 844
|
|
| TAIR|locus:2202290 TPS7 "trehalose-phosphatase/synthase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2838 (1004.1 bits), Expect = 1.4e-295, P = 1.4e-295
Identities = 529/786 (67%), Positives = 641/786 (81%)
Query: 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQ 60
MIIV N+LPL+A + + G W+FSWD+DSL LQLKDGL ED+E++YVG + +D +EQ
Sbjct: 61 MIIVANRLPLKAEKRN---GSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNEQ 117
Query: 61 DEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQA 120
D+V+Q LL+ FKCVP F PP+L SKFY GFCK+ +WPLFHYMLP S D GGRFDRSLW+A
Sbjct: 118 DDVAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWEA 177
Query: 121 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 180
YV+ NK+F KV+EVI+PDDDFVW+HDYHLMVLPTFLR+RFNR+++GFFLHSPFPSSEIY
Sbjct: 178 YVATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEIY 237
Query: 181 RTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 240
R+LP+R+E+L+ALLN+DLIGFHTFDYARHFL+CCSRMLG+ YQSKRGYIGLEY+GRTV I
Sbjct: 238 RSLPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVGI 297
Query: 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 300
KI+PVGI++G++QSV+ E E KV EL+++F+G+ V+LG+DDMDIFKGI+LKLLAMEQ+
Sbjct: 298 KIMPVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQM 357
Query: 301 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 360
L Q+P+ RG+ VLVQI NPARG+G DV+E++ E + RRIN FG+PGYQP++ IDTP+
Sbjct: 358 LRQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTPV 417
Query: 361 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGL--DPSTAKSSMLV 418
E AYY IAEC +VTAVRDGMNL PYEYI+CRQG LG D S K SMLV
Sbjct: 418 SINEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQG------LLGSESDFSGPKKSMLV 471
Query: 419 VSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWA 478
SEF+GCSPSLSGAIRVNPWN++A EA++ AL +SDAEKQ+RHEKH+RYVSTHDVAYW+
Sbjct: 472 ASEFIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWS 531
Query: 479 RSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLD 538
RSFLQDLER C DH ++RCWG+G GFRVVALDPNFRKLSI IVS YKR K+RAILLD
Sbjct: 532 RSFLQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLD 591
Query: 539 YDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAE 598
YDGT+M SI+ +P+ E + LD LC D KN +F+VSG+ R++L++WF+ C+ +GIAAE
Sbjct: 592 YDGTLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAE 651
Query: 599 HGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADP 658
HGYF++ + +WETC DF W QI EPVMK YTE+TDGS+IE KESALVW ++ ADP
Sbjct: 652 HGYFLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADP 711
Query: 659 DFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPD 718
FGS QAKE+L+HLESVLANEPV+VKSG IVEVKPQGV+KG V++ +M KG D
Sbjct: 712 GFGSLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGKGKPVD 771
Query: 719 FVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLL 778
FVLCIGDDRSDEDMFE I +A + L A VFACTVGQKPSKAKYYLDDT E+ ML
Sbjct: 772 FVLCIGDDRSDEDMFEAIGNAMSKRLLCDNALVFACTVGQKPSKAKYYLDDTTEVTCMLE 831
Query: 779 GLAEAS 784
LAEAS
Sbjct: 832 SLAEAS 837
|
|
| TAIR|locus:2016179 TPS8 "trehalose-6-phosphatase synthase S8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2771 (980.5 bits), Expect = 1.7e-288, P = 1.7e-288
Identities = 508/784 (64%), Positives = 621/784 (79%)
Query: 2 IIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQD 61
IIV N LPL++ R ++ +G W F+WDEDSL LQL+DG + E +YVG + I+ +EQ+
Sbjct: 60 IIVANMLPLQSKRDAE-TGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNEQE 118
Query: 62 EVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAY 121
EVSQ LLE F CV F+ EL FY GFCK LWPLFHYMLP+ PD G RFDR LWQAY
Sbjct: 119 EVSQKLLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQAY 178
Query: 122 VSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR 181
VS NKIF+D+VMEVI+P+DD+VW+ DYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSEIYR
Sbjct: 179 VSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 238
Query: 182 TLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIK 241
TLP+RDE+LR LLN DLIGFHTFDYARHFLSCCSRMLG+ Y+SKRG+IGL+YFGRTV IK
Sbjct: 239 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 298
Query: 242 ILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLL 301
ILPVG+H+G+L+SVL+L T AK E+Q+QFKG+ ++LG+DDMDIFKGISLKL+AME L
Sbjct: 299 ILPVGVHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEHLF 358
Query: 302 SQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQ 361
+GK+VLVQI NPAR G+DV+E + ET+ T RRIN+ +G Y+P+VLID +
Sbjct: 359 ETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRLVP 418
Query: 362 FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE 421
E+ AYY A+CCLV AVRDGMNL+PY+YI+CRQG + P T S LVVSE
Sbjct: 419 RSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQGTRSNKAVVDSSPRT---STLVVSE 475
Query: 422 FVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSF 481
F+GCSPSLSGAIRVNPW++DAVAEA++SAL +S+ EKQ+RHEKHY Y+STHDV YWA+SF
Sbjct: 476 FIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSF 535
Query: 482 LQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDG 541
+QDLERACRDH +RCWGIGFGLGFRV++L P+FRKLS++HIV Y++T+ RAI LDYDG
Sbjct: 536 MQDLERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDG 595
Query: 542 TIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGY 601
T++ SI P+ E V++L LC DP N VF+VSG+ R++L+ W S CE LGIAAEHGY
Sbjct: 596 TLVPESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGY 655
Query: 602 FVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFG 661
F+R +WETC S D W+ + EPVM+ Y E TDG++IE KESALVW+ Q ADPDFG
Sbjct: 656 FIRWKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFG 715
Query: 662 SCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVL 721
SCQAKE+LDHLESVLANEPV VK G +IVEVKPQGV+KGL A+ + M ++G P+ V+
Sbjct: 716 SCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGLAAEKVIREMVERGEPPEMVM 775
Query: 722 CIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLA 781
CIGDDRSDEDMFE I S P L EVFACTVG+KPSKAKY+LDD A++L++L GL
Sbjct: 776 CIGDDRSDEDMFESILSTVTNPELLVQPEVFACTVGRKPSKAKYFLDDEADVLKLLRGLG 835
Query: 782 EASA 785
++S+
Sbjct: 836 DSSS 839
|
|
| TAIR|locus:2195678 TPS10 "trehalose phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2759 (976.3 bits), Expect = 3.2e-287, P = 3.2e-287
Identities = 502/784 (64%), Positives = 622/784 (79%)
Query: 2 IIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQD 61
IIV N LPL + S+ +G W FS D DS LL LKDG + EVIYVG +K +D+SEQD
Sbjct: 62 IIVANFLPLNGKKDSE-TGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSEQD 120
Query: 62 EVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAY 121
EVS L E F CV F+P ++ KFY GFCKQ LWPLFHYMLP+ PD G RFDR LWQAY
Sbjct: 121 EVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQAY 180
Query: 122 VSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR 181
VS NKIFADKVM VI+ ++D++W+HDYHLMVLPTFLR+RF+RVKLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
Query: 182 TLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIK 241
TLP+R+ELLR LLN DLIGFHTFDYARHFLSCC RMLG+ Y+SKRG+I L+Y GRTV +K
Sbjct: 241 TLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVFLK 300
Query: 242 ILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLL 301
ILP+GIH+G+L+SVLNLP T K+ E+Q++++G+ ++LGVDDMDIFKG+SLK+LA E LL
Sbjct: 301 ILPIGIHMGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEHLL 360
Query: 302 SQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQ 361
Q PS GKIVL+QI NPARG G+DVQE + ET+ TV+RIN+ +G Y+PVVLID P+
Sbjct: 361 QQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRPVP 420
Query: 362 FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE 421
+E+ AYY +AECC+V AVRDGMNL+PY+Y +CRQG ++ +LG+ ++S LV+SE
Sbjct: 421 RFEKSAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLPRTSTLVLSE 480
Query: 422 FVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSF 481
F+GCSPSLSGAIRVNPW++DAVA+++ SA+ +SD EKQ+RH+KH+ Y+STHDV YWARSF
Sbjct: 481 FIGCSPSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWARSF 540
Query: 482 LQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDG 541
QDLERA RDH +RCWG+G+GLGFR+VAL PNFR+LSI+ VSAY+R+ RAI LDYDG
Sbjct: 541 SQDLERASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDYDG 600
Query: 542 TIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGY 601
T++ SI P+AE ++ L LC DP N +F+VSG+ + +L+EW + CE LGIAAEHGY
Sbjct: 601 TLVPETSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEHGY 660
Query: 602 FVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFG 661
F R N DWET D WK++ EP+M+LYTETTDGS IE KESALVW+ Q ADPDFG
Sbjct: 661 FTRWNKSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPDFG 720
Query: 662 SCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVL 721
SCQAKELLDHLE+VL NEPV V G IVEVKPQGV+KGLV L M + G+ PDFV+
Sbjct: 721 SCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQGVSKGLVTGKILSRMLEDGIAPDFVV 780
Query: 722 CIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLA 781
CIGDDRSDE+MFE I + + S S E+FACTVG+KPSKAKY+LD+ ++++++L GLA
Sbjct: 781 CIGDDRSDEEMFENISTTLSAQSSSMSTEIFACTVGRKPSKAKYFLDEVSDVVKLLQGLA 840
Query: 782 EASA 785
S+
Sbjct: 841 NTSS 844
|
|
| TAIR|locus:2054027 TPS11 "trehalose phosphatase/synthase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2661 (941.8 bits), Expect = 7.7e-277, P = 7.7e-277
Identities = 490/785 (62%), Positives = 609/785 (77%)
Query: 2 IIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQD 61
I+V NQLPLRAHR S W F +D DSL LQLKDG + EV+YVG + + SEQ+
Sbjct: 53 IVVSNQLPLRAHRDIS-SNKWCFEFDNDSLYLQLKDGFPPETEVVYVGSLNADVLPSEQE 111
Query: 62 EVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAY 121
+VSQ LLE F+CVP F+P +L +K+YHGFCK +LWP+FHY+LP++ G FDRS W+AY
Sbjct: 112 DVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKHYLWPIFHYLLPMTQAQGSLFDRSNWRAY 171
Query: 122 VSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR 181
+VNKIFADK+ EV++PDDD+VW+HDYHLM+LPTFLR RF+R+KLG FLHSPFPSSEIYR
Sbjct: 172 TTVNKIFADKIFEVLNPDDDYVWIHDYHLMILPTFLRNRFHRIKLGIFLHSPFPSSEIYR 231
Query: 182 TLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIK 241
TLP+RDE+L+ LN DL+GFHTFDYARHFLSCCSRMLG+ Y+SKRGYIGLEYFGRTVSIK
Sbjct: 232 TLPVRDEILKGFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYFGRTVSIK 291
Query: 242 ILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLL 301
ILPVGIH+GQ++S+ +T KV L+++FKG IVMLGVDD+D+FKGISLK AM QLL
Sbjct: 292 ILPVGIHMGQIESIKASEKTAEKVKRLRERFKGNIVMLGVDDLDMFKGISLKFWAMGQLL 351
Query: 302 SQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPG-YQPVVLIDTPL 360
QN RGK+VLVQI NPAR G+DVQ+V+ + + IN FGRPG Y+P+V I+ P+
Sbjct: 352 EQNEELRGKVVLVQITNPARSSGKDVQDVEKQINLIADEINSKFGRPGGYKPIVFINGPV 411
Query: 361 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS 420
+++AYY I+EC +V AVRDGMNL+PY+Y + RQG+ LD LG + S+++VS
Sbjct: 412 STLDKVAYYAISECVVVNAVRDGMNLVPYKYTVTRQGSPALDAALGFGEDDVRKSVIIVS 471
Query: 421 EFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 480
EF+GCSPSLSGAIRVNPWNIDAV AM SA+ +SD EK +RH+KH++Y+S+H+VAYWARS
Sbjct: 472 EFIGCSPSLSGAIRVNPWNIDAVTNAMSSAMTMSDKEKNLRHQKHHKYISSHNVAYWARS 531
Query: 481 FLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYD 540
+ QDL+RAC+DH +R WG+GFGL F+VVALDPNFR+L + IV AY+R+ +R ILLDYD
Sbjct: 532 YDQDLQRACKDHYNKRFWGVGFGLFFKVVALDPNFRRLCGETIVPAYRRSSSRLILLDYD 591
Query: 541 GTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 600
GT+M ++ P+ + +++L+ LC DP N+VF+VSG+ +D L++WF SC LGI+AEHG
Sbjct: 592 GTMMDQDTLDKRPSDDLISLLNRLCDDPSNLVFIVSGRGKDPLSKWFDSCPNLGISAEHG 651
Query: 601 YFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDF 660
YF R N WET D SWK+IA+PVM Y E TDGS IE KESA+VW+ Q AD F
Sbjct: 652 YFTRWNSNSPWETSELPADLSWKKIAKPVMNHYMEATDGSFIEEKESAMVWHHQEADHSF 711
Query: 661 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQ-KGMLPDF 719
GS QAKELLDHLESVL NEPV VK G +IVEVKPQGV+KG V +H + TM KG PDF
Sbjct: 712 GSWQAKELLDHLESVLTNEPVVVKRGQHIVEVKPQGVSKGKVVEHLIATMRNTKGKRPDF 771
Query: 720 VLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLG 779
+LCIGDDRSDEDMF+ I S+ + EVFACTVGQKPSKAKYYLDDT +++ML
Sbjct: 772 LLCIGDDRSDEDMFDSIVKHQDVSSIG-LEEVFACTVGQKPSKAKYYLDDTPSVIKMLEW 830
Query: 780 LAEAS 784
LA AS
Sbjct: 831 LASAS 835
|
|
| DICTYBASE|DDB_G0284975 tpsB "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 741 (265.9 bits), Expect = 1.5e-125, Sum P(2) = 1.5e-125
Identities = 167/468 (35%), Positives = 263/468 (56%)
Query: 33 LQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLET---FKCVPAFIPPELFSKFYHG 89
L+ KD + ED +++G +++ E+ ++Q + E F+ V F+ P F +Y G
Sbjct: 87 LKAKDEI-EDW--LWIGWSHCEVNEDEEPMLNQAIKEFSPHFEHV--FLNPRQFENYYKG 141
Query: 90 FCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYH 149
+CK LW L HY + R W+ YV VN++FA+K+ V P D +W+HDYH
Sbjct: 142 YCKNGLWLLLHYQMNFI-----RMQSEWWEEYVGVNQMFAEKIASVWRPSD-IIWIHDYH 195
Query: 150 LMVLPTFLRKRFN-RVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYAR 208
LM++P LR+ +GFF H+PFPS E++R LP R ELL+ +L+++LIGF +F+Y R
Sbjct: 196 LMLVPQMLRQLLPPEASIGFFFHAPFPSYELFRILPNRKELLKGILSSNLIGFQSFEYVR 255
Query: 209 HFLSCCSRMLGVSYQSKRGYIGLEYF--GRT--VSIKILPVGIHIGQLQSVLNLPETEAK 264
HF S C+R+L + K GLE F G T +++ P+G+ LNLPE ++
Sbjct: 256 HFKSSCARLLDLEVHPK----GLEIFEDGSTHFTKLQVYPIGVDYNDFAKNLNLPEVSSR 311
Query: 265 VAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRG 324
V L+ FKG+ V++ D +D +G+ KL EQLL+ +P GK+V +QI P G
Sbjct: 312 VESLRKIFKGKKVVVARDRLDQIEGVPRKLEVFEQLLNDHPEYIGKLVFIQIYEPTVEEG 371
Query: 325 RDVQEVQSETHATVR----RINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAV 380
+ E Q H TV RIN FG+ + P+ I+ + + E A Y +A+ L+T +
Sbjct: 372 DETDE-QKILHKTVNEMVGRINGKFGKLSFNPIEYINKKISYEELSALYKLADIALITPI 430
Query: 381 RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNI 440
RDGMNL +EY++C++ N G+ L++SEF G + L G+I VNP++
Sbjct: 431 RDGMNLTSHEYVVCQKDN------FGV---------LILSEFAGAARCLGGSIIVNPFSK 475
Query: 441 DAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERA 488
+ EA+ AL +S +++++H+ +Y YV + ++W + FL DL A
Sbjct: 476 KEIMEAIIEALNMSMHDRKLKHQINYNYVLANTSSFWGKRFLCDLNEA 523
|
|
| TAIR|locus:2137712 TPS4 "trehalose-6-phosphatase synthase S4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1020 (364.1 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
Identities = 245/718 (34%), Positives = 386/718 (53%)
Query: 73 CVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSL-WQAYVSVNKIFADK 131
C+P F+ E+ ++Y+G+C LWP+FHY L P+ R D ++ +Q+ K
Sbjct: 74 CIPVFLE-EVCDQYYNGYCNNILWPIFHY-LGTPPEY--RNDATITYQSQYEAYKKANQI 129
Query: 132 VMEVISP---DDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDE 188
+V+ + D VW HDYH+M+LP +L++ +++K+G+FLH+PFPSSE+Y+TLP R +
Sbjct: 130 FFDVVKEHYEEGDVVWCHDYHVMLLPQYLKEYNSKMKVGWFLHTPFPSSEMYKTLPSRSD 189
Query: 189 LLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIH 248
LLR++L ADL+GFHT+D+ARHFL+ C +LGV S+ G+ G+ + + P+GI
Sbjct: 190 LLRSVLTADLVGFHTYDFARHFLNACMCILGVEATSE----GIVDQGKVTRVAVFPIGIE 245
Query: 249 IGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKR 308
+ + L E + + ++ F G+ ++LGVD +D KGI K A E+ L +N R
Sbjct: 246 PERFINTSELSEVVQYMKKFKNDFGGRKLILGVDRLDTIKGIPQKYQAFEKFLEENAEWR 305
Query: 309 GKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAY 368
GK++L+QIA P R + Q+++ + H V RIN FG P++ +D + F + A
Sbjct: 306 GKVMLLQIAVPTRNGIGEYQKIKDQCHYHVGRINGRFGSISSVPIIHLDCSIDFNQLCAL 365
Query: 369 YVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPS 428
Y I + LVT++RDGMNL+ E+I C++ A+ +L++SEF G S
Sbjct: 366 YAITDVLLVTSLRDGMNLVSSEFIACQK---------------AEKGVLILSEFAGAGQS 410
Query: 429 L-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQ-DLE 486
L +GAI VNPWNI V+ A+ AL +S EK+ +H+ +++YV TH WA F++ L
Sbjct: 411 LGAGAILVNPWNIKEVSSAIGEALNMSHEEKERKHKINFQYVKTHSTQQWADDFMKLTLT 470
Query: 487 RACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDH-IVSAYKRTKNRAILLDYDGTIMV 545
+ G G P +H ++ Y ++ NR ++L + GT+
Sbjct: 471 NILCSKLIEITTSAELGAGLAATLELP-------EHDVIQQYSKSNNRLLILGFYGTLTQ 523
Query: 546 P--------GSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAA 597
P ++ + + L LC DPK V ++S ++ L + F + +AA
Sbjct: 524 PMKNQERRGDGMNLELHPQLKERLKELCSDPKTTVVVLSRSEKCILDKNFGEYN-MWLAA 582
Query: 598 EHGYFVRPNYGVDWETCVSVP-DFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYA 656
E+G F+R G +W T + + W + V K +TE T GS +ET E++LVWN++ A
Sbjct: 583 ENGMFLRHTSG-EWVTRIPEHMNLEWIDGVKHVFKYFTERTPGSYLETSEASLVWNYENA 641
Query: 657 DPDFGSCQAKELLDHL-ESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQL-ETMHQKG 714
D +FG QA+++L HL ++N V V G VEV GV KG + L E +H K
Sbjct: 642 DAEFGRAQARDMLQHLWAGPISNASVDVVRGGQSVEVHAVGVTKGSAMERILGEIVHNKS 701
Query: 715 ML-P-DFVLCIGDDRS-DEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDD 769
M P D+VLCIG DED++ + P L+ A+ + + P K + D
Sbjct: 702 MATPIDYVLCIGCFLGKDEDVYTFFE-----PELTKKAKSLSSSGSDSPKKVSSTIVD 754
|
|
| ASPGD|ASPL0000037859 orlA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 567 (204.7 bits), Expect = 1.6e-105, Sum P(2) = 1.6e-105
Identities = 123/349 (35%), Positives = 199/349 (57%)
Query: 90 FCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYH 149
+ ++ L+ L HY D GRF+R W YV +N++FA+++++ + D VW+HDYH
Sbjct: 247 YAEKELYALLHYKQNGPTD--GRFERDSWTDYVRMNQLFAERILQEYK-EGDIVWIHDYH 303
Query: 150 LMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARH 209
L +LP+ LR+ + +GF+LHSPFPSSE R L R E+L +L A++IGF TF Y+RH
Sbjct: 304 LFLLPSILRQHVPNIYIGFYLHSPFPSSEYMRCLAKRKEILTGVLGANMIGFQTFSYSRH 363
Query: 210 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSV-LNLPETEAKVAEL 268
F SCC+R+LG S G++ +G V++ + P+GI +Q + +TE V L
Sbjct: 364 FSSCCTRVLGFESDSA----GVDAYGAHVAVDVFPIGIDAEAIQKIAFENADTEKAVEGL 419
Query: 269 QDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPAR-GRGRDV 327
+ + G+ +++G D +D +G++ KL A E L + P R K+VL+Q+ +P ++
Sbjct: 420 RQLYAGKKIIVGRDRLDSARGVAQKLQAFETFLERFPEWRDKVVLIQVTSPTSVEEEKEE 479
Query: 328 QEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLI 387
Q++ S V IN FG + PV L +E A +A+ L+T VRDGMN
Sbjct: 480 QKIASRISNLVSTINGRFGSLSFSPVKYYPQYLSPHEYFALLRVADVGLITTVRDGMNTT 539
Query: 388 PYEYIICRQGNEK-LDMTLGLDPSTAKSSMLVVSEF--VGCSPSLSGAI 433
EYI+C+Q N L ++ + A SS + ++ + +G S +++ A+
Sbjct: 540 SLEYILCQQENHSPLILSEFSGTAGALSSAIHINPWDTIGVSEAINKAL 588
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q54K57 | TPSA_DICDI | 2, ., 4, ., 1, ., 1, 5 | 0.3384 | 0.8866 | 0.9713 | yes | no |
| Q94AH8 | TPS6_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.7481 | 0.9788 | 0.9139 | no | no |
| O23617 | TPS5_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.8267 | 0.9750 | 0.9083 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 803 | |||
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 1e-178 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 1e-172 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 1e-145 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 1e-145 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 2e-87 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 2e-69 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 9e-69 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 9e-43 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 9e-26 | |
| TIGR01484 | 204 | TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, | 6e-14 | |
| PLN02151 | 354 | PLN02151, PLN02151, trehalose-phosphatase | 1e-07 | |
| PRK10187 | 266 | PRK10187, PRK10187, trehalose-6-phosphate phosphat | 2e-07 | |
| PLN02580 | 384 | PLN02580, PLN02580, trehalose-phosphatase | 2e-06 | |
| PLN03017 | 366 | PLN03017, PLN03017, trehalose-phosphatase | 7e-06 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 1e-04 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 4e-04 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 1435 bits (3715), Expect = 0.0
Identities = 633/789 (80%), Positives = 717/789 (90%), Gaps = 3/789 (0%)
Query: 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGED-VEVIYVGCIKEQIDLSE 59
+IIV NQLP+RA R SDGS GW FSWDE+SLLLQLKDGLG+D +EVIYVGC+KE+I L+E
Sbjct: 62 IIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNE 121
Query: 60 QDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQ 119
Q+EVSQ LLETFKCVP F+PP+LF+++YHGFCKQ LWPLFHYMLPLSPDLGGRF+RSLWQ
Sbjct: 122 QEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQ 181
Query: 120 AYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI 179
AYVSVNKIFAD++MEVI+P+DDFVW+HDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI
Sbjct: 182 AYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI 241
Query: 180 YRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 239
Y+TLPIR+ELLRALLN+DLIGFHTFDYARHFLSCCSRMLG+SY+SKRGYIGLEY+GRTVS
Sbjct: 242 YKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVS 301
Query: 240 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDIFKGISLKLLAM 297
IKILPVGIH+GQLQSVL+LPETEAKV EL QF + +I++LGVDDMDIFKGISLKLLAM
Sbjct: 302 IKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAM 361
Query: 298 EQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLID 357
EQLL Q+P +GK+VLVQIANPARG+G+DV+EVQ+ETH+TV+RIN+ FG+PGY P+VLID
Sbjct: 362 EQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLID 421
Query: 358 TPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSML 417
PL+FYER+AYYV+AECCLVTAVRDGMNLIPYEYII RQGNEKLD LGL+PST K SML
Sbjct: 422 APLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSML 481
Query: 418 VVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYW 477
VVSEF+GCSPSLSGAIRVNPWNIDAVA+AMDSAL +++ EKQ+RHEKHYRYVSTHDV YW
Sbjct: 482 VVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYW 541
Query: 478 ARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILL 537
ARSFLQDLER CRDH RRRCWGIGFGL FRVVALDPNFRKLS++HIVSAYKRT RAILL
Sbjct: 542 ARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILL 601
Query: 538 DYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAA 597
DYDGT+M SI SP+++++ IL+ LCRD N+VF+VS + R TLA+WFS CE LGIAA
Sbjct: 602 DYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAA 661
Query: 598 EHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYAD 657
EHGYF+R V+WETCV V D SWKQIAEPVM+LYTETTDGSTIE KE+ALVW ++ AD
Sbjct: 662 EHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDAD 721
Query: 658 PDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLP 717
PDFGSCQAKELLDHLESVLANEPV+VKSG NIVEVKPQGV+KGLVA+ L M ++GMLP
Sbjct: 722 PDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLP 781
Query: 718 DFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRML 777
DFVLCIGDDRSDEDMFEVI S+ AGPS++P AEVFACTVGQKPSKAKYYLDDTAEI+R++
Sbjct: 782 DFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLM 841
Query: 778 LGLAEASAQ 786
GLA S Q
Sbjct: 842 QGLASVSEQ 850
|
Length = 854 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 681 bits (1760), Expect = 0.0
Identities = 244/490 (49%), Positives = 318/490 (64%), Gaps = 27/490 (5%)
Query: 2 IIVGNQLPLRAHRSSDGSGGWTFSWDEDSL-LLQLKDGLGEDVEVIYVGCIKEQIDLSE- 59
++V N+LP+ A R +G W FS S L+ +GL E E ++VG +D E
Sbjct: 4 VVVSNRLPVTAKREEEGK--WEFSIKMSSGGLVSALNGLSEATEGVWVGWPGVPVDEDEP 61
Query: 60 QDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQ 119
+D VSQ L E F CVP F+ E ++Y+GF LWPLFHY LP P+ FDRS W
Sbjct: 62 KDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLP--PNNEDEFDRSWWD 119
Query: 120 AYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI 179
AYV VNK+FADK++EV D +WVHDYHLM+LP LRKR K+GFFLH PFPSSEI
Sbjct: 120 AYVKVNKLFADKIVEVYKDGD-LIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPSSEI 178
Query: 180 YRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 239
+R LP+R+E+LR LL ADLIGFHT+DYARHFLSCCSR+LG+ S G +EY GRTVS
Sbjct: 179 FRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLETTSDGG---VEYGGRTVS 235
Query: 240 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQI-VMLGVDDMDIFKGISLKLLAME 298
+ P+GI G+++S L P + KV EL+++F + ++LGVD +D KGI KLLA E
Sbjct: 236 VGAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLILGVDRLDYIKGIPQKLLAFE 295
Query: 299 QLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDT 358
+ L + P RGK+VLVQIA P+RG + Q ++S+ V RIN FG Y PV +
Sbjct: 296 RFLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHLHR 355
Query: 359 PLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLV 418
L F E IA Y IA+ CLVT++RDGMNL+ YEY+ C+Q + +L+
Sbjct: 356 SLDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQDRK---------------GVLI 400
Query: 419 VSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYW 477
+SEF G + SL GAI VNPW+I+ VAEA++ AL +S+ E+Q RH K ++Y+S HDV YW
Sbjct: 401 LSEFAGAAQSLNDGAILVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHDVQYW 460
Query: 478 ARSFLQDLER 487
A SFL DL+R
Sbjct: 461 AESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 598 bits (1545), Expect = 0.0
Identities = 212/485 (43%), Positives = 284/485 (58%), Gaps = 27/485 (5%)
Query: 2 IIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQD 61
++V N+LP+ R DG + L GL + ++VG + D E+D
Sbjct: 3 VVVSNRLPVSIERDGDG---EFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEED 59
Query: 62 EVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAY 121
EVS LL + P F+ PE F +Y+GF + LWPLFHY L L RFDR W+AY
Sbjct: 60 EVSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAY 114
Query: 122 VSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR 181
V VN+ FAD + EV+ P D VWVHDYHL++LP LR+R ++GFFLH PFPSSEI+R
Sbjct: 115 VRVNRKFADAIAEVLRPGD-LVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFR 173
Query: 182 TLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIK 241
LP R+ELLR LL ADLIGF T YAR+FLSCCSR+LG+ G+EY GR V +
Sbjct: 174 CLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTD---DGGVEYGGRRVRVG 230
Query: 242 ILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLL 301
P+GI + + PE + + AEL+++ G+ +++GVD +D KGI +LLA E+LL
Sbjct: 231 AFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLL 290
Query: 302 SQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQ 361
+ P RGK+VLVQIA P+R + QE++ E V RIN FG + PV + L
Sbjct: 291 ERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLP 350
Query: 362 FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE 421
E A Y A+ LVT +RDGMNL+ EY+ C+ + +L++SE
Sbjct: 351 REELAALYRAADVALVTPLRDGMNLVAKEYVACQDDD---------------PGVLILSE 395
Query: 422 FVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSF 481
F G + LSGA+ VNP++ID VA+A+ AL + E++ RH K YV THDV WA SF
Sbjct: 396 FAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSF 455
Query: 482 LQDLE 486
L DL
Sbjct: 456 LDDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 596 bits (1538), Expect = 0.0
Identities = 278/796 (34%), Positives = 405/796 (50%), Gaps = 87/796 (10%)
Query: 2 IIVGNQLPLRAHRSSDG------SGGWTFSWDEDSLLLQLKDGLGEDVEVIYVG----CI 51
IIV N+LP+ R G GG L L+ E ++VG +
Sbjct: 4 IIVSNRLPVTVVREDGGVELTPSVGG---------LATGLR-SFHERGGGLWVGWPGLDL 53
Query: 52 KEQIDLSEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGG 111
E+ ++ + L E VP F+ E ++Y GFC LWPLFHY +
Sbjct: 54 -EEESEEQRARIEPRL-EELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTE---- 107
Query: 112 RFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLH 171
F+ W++Y VN+ FA+ + + P D VWVHDY LM+LP LR+R ++GFFLH
Sbjct: 108 -FEDRFWESYERVNQRFAEAIAAIARPGD-VVWVHDYQLMLLPAMLRERLPDARIGFFLH 165
Query: 172 SPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGL 231
PFPS E++R LP R+E+L LL ADLIGFHT+DY RHFLS R+LG Y+++ G I L
Sbjct: 166 IPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLG--YETELGEIRL 223
Query: 232 EYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGIS 291
GR V + P+GI + + PE + ++ L+ +G+ ++L +D +D KGI
Sbjct: 224 G--GRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIP 281
Query: 292 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 351
+LLA E+ L +NP RGK+ LVQ+A P+R QE++ E V RIN FG +
Sbjct: 282 RRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWT 341
Query: 352 PVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPST 411
P+ L F E +A Y A+ LVT +RDGMNL+ EY+ R +
Sbjct: 342 PIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGD------------ 389
Query: 412 AKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST 471
+L++SE G + L+ A+ VNP +I+ +A A+ AL + + E++ R + +
Sbjct: 390 ---GVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRR 446
Query: 472 HDVAYWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTK 531
+DV WA FL +L A + F + P + + I++ Y+
Sbjct: 447 YDVHKWASDFLDELREAAEKNKA-----------FASKPITPA----AAEEIIARYRAAS 491
Query: 532 NRAILLDYDGTI--MVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589
R +LLDYDGT+ P P+ E +L L DP V ++SG+DRDTL WF
Sbjct: 492 RRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGD 551
Query: 590 CEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESAL 649
+ + AEHG + R G +W+ V WK P+++ + + T GS IE KE++L
Sbjct: 552 L-PIHLVAEHGAWSRAP-GGEWQLLEPV-ATEWKDAVRPILEEFVDRTPGSFIEEKEASL 608
Query: 650 VWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLET 709
W+++ ADP+ G +A EL+ L S+L+N P+ V G +VEV+P GVNKG + LE
Sbjct: 609 AWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE- 667
Query: 710 MHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACT--VGQKPSKAKYYL 767
DFVL IGDD +DEDMF + P A T VG S+A+Y L
Sbjct: 668 AGP----YDFVLAIGDDTTDEDMFRAL----------PET---AITVKVGPGESRARYRL 710
Query: 768 DDTAEILRMLLGLAEA 783
E+ +L L +
Sbjct: 711 PSQREVRELLRRLLDI 726
|
Length = 726 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 532 bits (1372), Expect = e-178
Identities = 290/821 (35%), Positives = 437/821 (53%), Gaps = 83/821 (10%)
Query: 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLG-EDVEVIYVGCIKEQI-DLS 58
+++V N+LP+ A R+ + S W+ L+ L LG ++ E ++G + D
Sbjct: 13 LLVVANRLPVSAKRTGEDS--WSLEMSPGGLVSAL---LGVKEFETKWIGWPGVDVHDEI 67
Query: 59 EQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYM-LPLSPDLGG-RFDRS 116
+ ++++L E C+P F+ E+F ++Y+G+C LWP+FHYM LP R S
Sbjct: 68 GKAALTESLAEK-GCIPVFLN-EVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFES 125
Query: 117 LWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS 176
+ AY N++F D V E + D VW HDYHLM LP +L++ N++K+G+FLH+PFPS
Sbjct: 126 QYDAYKKANRMFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPS 184
Query: 177 SEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGR 236
SEIY+TLP R ELLRA+L ADLIGFHT+D+ARHFLS C+R+LGV + G+ G+
Sbjct: 185 SEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVDQGK 240
Query: 237 TVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLA 296
+ + P+GI + + LPE + + EL+ F G+ V+LGVD +D+ KGI K LA
Sbjct: 241 VTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLA 300
Query: 297 MEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLI 356
E+ L +NP R K++LVQIA P R + Q+++S+ H V RIN FG P+ +
Sbjct: 301 FEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHL 360
Query: 357 DTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSM 416
D + F A Y I + LVT++RDGMNL+ YE++ C++ AK +
Sbjct: 361 DCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQK---------------AKKGV 405
Query: 417 LVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVA 475
LV+SEF G SL +GA+ VNPWNI V+ A+ AL +SD E++ RH +++YV TH
Sbjct: 406 LVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQ 465
Query: 476 YWARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAI 535
WA F+ +L + R + L ++ Y ++ NR +
Sbjct: 466 KWADDFMSELNDIIVEAE------------LRTRNIPLE---LPEQDVIQQYSKSNNRLL 510
Query: 536 LLDYDGTIMVPGSISTSP-----NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590
+L + GT+ P + + E L LC DPK V ++S +D L + F
Sbjct: 511 ILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE- 569
Query: 591 EGLGIAAEHGYFVRPNYGVDWETCVSVP---DFSWKQIAEPVMKLYTETTDGSTIETKES 647
+ +AAE+G F+R G +W T ++P + W + V K +T+ T S +E E+
Sbjct: 570 YNIWLAAENGMFLRHTSG-EWVT--TMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKSET 626
Query: 648 ALVWNFQYADPDFGSCQAKELLDHL-ESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQ 706
+LVWN++YAD +FG QA+++L HL ++N V V G VEV GV KG
Sbjct: 627 SLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRI 686
Query: 707 L-ETMHQKGM-LP-DFVLCIGDDRS-DEDMFEVIKSAAAGPSLSPVAE------------ 750
L E +H K M P DFV C G DED++ + S +
Sbjct: 687 LGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNL 746
Query: 751 -------VFACTVGQKPSKAKYYLDDTAEILRMLLGLAEAS 784
F+C +GQ +KA+Y LD + +++ +L LA A+
Sbjct: 747 VDLKGENYFSCAIGQARTKARYVLDSSNDVVSLLHKLAVAN 787
|
Length = 797 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 519 bits (1338), Expect = e-172
Identities = 286/794 (36%), Positives = 430/794 (54%), Gaps = 89/794 (11%)
Query: 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLG-EDVEVIYVGC----IKEQI 55
+++V N+LP+ A R + S W+ L+ L LG ++ E ++G + +++
Sbjct: 96 LLVVANRLPVSAVRRGEDS--WSLEISAGGLVSAL---LGVKEFEARWIGWAGVNVPDEV 150
Query: 56 DLSEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYM-LPLSPDLGG-RF 113
Q +++ L E +C+P F+ E+ ++Y+G+C LWPLFHY+ LP L R
Sbjct: 151 G---QKALTKALAEK-RCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRS 206
Query: 114 DRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSP 173
+S + AY N++FAD V E + D VW HDYHLM LP L++ + +K+G+FLH+P
Sbjct: 207 FQSQFAAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTP 265
Query: 174 FPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEY 233
FPSSEI+RTLP R ELLR++L ADL+GFHT+DYARHF+S C+R+LG+ + G+E
Sbjct: 266 FPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVED 321
Query: 234 FGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 293
GR + P+GI + L P+ + + EL+++F G+ VMLGVD +D+ KGI K
Sbjct: 322 QGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQK 381
Query: 294 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQ---SETHATVRRINKIFGRPGY 350
+LA E+ L +NP R K+VL+QIA P R DV E Q S+ H V RIN FG
Sbjct: 382 ILAFEKFLEENPEWRDKVVLLQIAVPTR---TDVPEYQKLTSQVHEIVGRINGRFGTLTA 438
Query: 351 QPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPS 410
P+ +D L F+ A Y + + LVT++RDGMNL+ YE++ C+
Sbjct: 439 VPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-------------- 484
Query: 411 TAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV 469
+K +L++SEF G + SL +GAI VNPWNI VA ++ AL + + E++ RH ++ +V
Sbjct: 485 -SKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHV 543
Query: 470 STHDVAYWARSFLQDL-ERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYK 528
+TH WA +F+ +L + +R R +V L + + Y
Sbjct: 544 TTHTAQEWAETFVSELNDTVVEAQLRTR----------QVPPQ------LPPEDAIQRYL 587
Query: 529 RTKNRAILLDYDGTIMVPGSISTS-------------PNAEAVAILDNLCRDPKNVVFLV 575
++ NR ++L ++ T+ P P + L LC DPK + ++
Sbjct: 588 QSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEP--LRALCSDPKTTIVVL 645
Query: 576 SGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFS---WKQIAEPVMKL 632
SG DR L E F + + +AAE+G F+R G +W T ++P+ W + V +
Sbjct: 646 SGSDRSVLDENFGEFD-MWLAAENGMFLRHTKG-EWMT--TMPEHLNMDWVDSVKHVFEY 701
Query: 633 YTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHL-ESVLANEPVSVKSGPNIVE 691
+TE T S ET+E++LVWN++YAD +FG QA+++L HL ++N V V G VE
Sbjct: 702 FTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVE 761
Query: 692 VKPQGVNKGLVAQHQL-ETMHQKGMLP--DFVLCIGDDRS-DEDMFEVIKSAAAGPSLSP 747
V+P GV KG L E +H K M D+VLCIG DED++ + PS SP
Sbjct: 762 VRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFEPEL--PSDSP 819
Query: 748 VAEVFACTVGQKPS 761
G K S
Sbjct: 820 AIARSRSPDGLKSS 833
|
Length = 934 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 435 bits (1122), Expect = e-145
Identities = 187/490 (38%), Positives = 268/490 (54%), Gaps = 30/490 (6%)
Query: 2 IIVGNQLPLRAHRSSDGSGGWTFSWDED--SLLLQLKDGLGEDVEVIYVGCIKEQIDLSE 59
I+V N+LP++ D L+ LK L ++G E
Sbjct: 18 IVVSNRLPVKKTPEGDKG---IEFGKRSAGGLVTALK-PLLRVDGGTWIGWSGTTGPTDE 73
Query: 60 QDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQ 119
+ + + F P + E + +Y+GF LWPLFHY + ++R+ W
Sbjct: 74 SSDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWD 128
Query: 120 AYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEI 179
AYV VN+ FADK++E+ P D +WVHDYHL+++P LR+R K+GFFLH PFPSSE+
Sbjct: 129 AYVKVNRKFADKIVEIYEPGD-IIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSSEV 187
Query: 180 YRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 239
+R LP R+E+L LL ADLIGF T YAR+FL CSR+LGV+ + + G GR V
Sbjct: 188 FRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNG--ADGRIVK 245
Query: 240 IKILPVGIHIGQLQSVLNLPETEAKVAEL-QDQFKGQIVMLGVDDMDIFKGISLKLLAME 298
+ P+GI + + L P + KV EL + + + +++GVD +D KGI +LLA E
Sbjct: 246 VGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFE 305
Query: 299 QLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDT 358
+LL + P RGK+VL+QIA P+R + Q ++ + V RIN FG + PV +
Sbjct: 306 RLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHR 365
Query: 359 PLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLV 418
L E +A Y A+ LVT +RDGMNL+ EY+ ++ K +L+
Sbjct: 366 DLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQR---------------DKPGVLI 410
Query: 419 VSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWA 478
+SEF G + L A+ VNPW+ VA+A+ AL +S E++ RHEK + V THDVA WA
Sbjct: 411 LSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWA 470
Query: 479 RSFLQDLERA 488
SFL DL +A
Sbjct: 471 NSFLDDLAQA 480
|
Length = 486 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 434 bits (1118), Expect = e-145
Identities = 182/490 (37%), Positives = 267/490 (54%), Gaps = 38/490 (7%)
Query: 1 MIIVGNQLPLRAHRSSD--GSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVG-CIKEQIDL 57
+I+V N+LP+ R +GG L + L L + ++ G K +
Sbjct: 2 LIVVSNRLPVPITRGGLEPSAGG---------LAVALLGAL-KATGGVWFGWSGKTVEED 51
Query: 58 SEQDEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSL 117
+ + L P F+ E +Y+GF LWPLFHY L R+DR
Sbjct: 52 EGEPFLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDLI-----RYDRKA 106
Query: 118 WQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS 177
W+AY VN++FA+ + ++ P D VWVHDYHLM+LP LR+ + K+GFFLH PFPSS
Sbjct: 107 WEAYRRVNRLFAEALAPLLQPGD-IVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPSS 165
Query: 178 EIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRT 237
EIYRTLP R ELL LL DL+GF T+D AR+FLS SR LG ++ G+E GRT
Sbjct: 166 EIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELG--LETLPN--GVESGGRT 221
Query: 238 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAM 297
V + P+GI + + P + ++AEL++ KG+ +++GVD +D KG+ +LLA
Sbjct: 222 VRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAF 281
Query: 298 EQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLID 357
E+ L ++P RGK+VLVQIA P+RG + Q+++ + V RIN FG + P+ ++
Sbjct: 282 ERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLN 341
Query: 358 TPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSML 417
E +A Y A+ LVT +RDGMNL+ EY+ + K +L
Sbjct: 342 RSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD---------------PKDGVL 386
Query: 418 VVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYW 477
++SEF G + L+GA+ VNP++ID +A+A+ AL + E++ RH + +DV W
Sbjct: 387 ILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRW 446
Query: 478 ARSFLQDLER 487
FL DL
Sbjct: 447 REDFLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 276 bits (707), Expect = 2e-87
Identities = 109/239 (45%), Positives = 144/239 (60%), Gaps = 7/239 (2%)
Query: 536 LLDYDGTI--MVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGL 593
LDYDGT+ +V + P+ +++L+ L DP N V ++SG+ R + F L
Sbjct: 1 FLDYDGTLSPIVEDPDAAVPSDRLLSLLNRLASDPPNTVAIISGRSRA-FEDLFFGVPNL 59
Query: 594 GIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNF 653
G+AAEHG F+R G DW V D WK+ +++ YTE T GS IE K+SAL W++
Sbjct: 60 GLAAEHGAFIRDPGGEDWTNLAEVEDLDWKKEVAAILEEYTERTPGSYIEDKKSALAWHY 119
Query: 654 QYADPDFGSCQAKELLDHLESVLANEP-VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQ 712
+ AD DFG QAKEL +HLESVL + P V V G +VEV+P GV+KG A+ LE +
Sbjct: 120 RNADDDFGVFQAKELAEHLESVLKDYPDVRVTQGKKVVEVRPVGVSKGKAAERLLEELGS 179
Query: 713 KGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTA 771
G PDF LCIGDDR+DEDMF+V+ EV A +VG KPS AKY+LDD +
Sbjct: 180 AGSPPDFPLCIGDDRTDEDMFDVVNPT---KMSGLSIEVGATSVGSKPSSAKYFLDDPS 235
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 236 bits (603), Expect = 2e-69
Identities = 143/412 (34%), Positives = 223/412 (54%), Gaps = 44/412 (10%)
Query: 86 FYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWV 145
+Y+ F LWP FHY L L +F R W+ Y+ VN + ADK++ ++ DD +W+
Sbjct: 76 YYNQFSNAVLWPAFHYRLDLV-----QFQRPAWEGYLRVNALLADKLLPLLKDDD-IIWI 129
Query: 146 HDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFD 205
HDYHL+ + LRKR ++GFFLH PFP+ EI+ LP DELL L + DL+GF T +
Sbjct: 130 HDYHLLPFASELRKRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTEN 189
Query: 206 YARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQL--QSVLNLPETEA 263
FL C S + V+ +S + + +G+ ++ P+GI ++ Q+ LP
Sbjct: 190 DRLAFLDCLSNLTRVTTRSGKSHTA---WGKAFRTEVYPIGIEPDEIAKQAAGPLP---P 243
Query: 264 KVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGR 323
K+A+L+ + K + V+ +D KG+ + LA E LL + P GKI QIA +RG
Sbjct: 244 KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRG- 302
Query: 324 GRDVQEVQS-----ETHATVRRINKIFGRPGYQPVVLIDTPLQFYER---IAYYVIAECC 375
DVQ Q ET A RIN +G+ G+ P+ ++ Q ++R + + ++
Sbjct: 303 --DVQAYQDIRHQLETEAG--RINGKYGQLGWTPLYYLN---QHFDRKLLMKIFRYSDVG 355
Query: 376 LVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRV 435
LVT +RDGMNL+ EY+ + DP A +LV+S+F G + L+ A+ V
Sbjct: 356 LVTPLRDGMNLVAKEYVAAQ------------DP--ANPGVLVLSQFAGAANELTSALIV 401
Query: 436 NPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLER 487
NP++ D VA A+D AL + AE+ RH + + +D+ +W F+ DL++
Sbjct: 402 NPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQ 453
|
Length = 474 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 235 bits (600), Expect = 9e-69
Identities = 129/450 (28%), Positives = 213/450 (47%), Gaps = 42/450 (9%)
Query: 54 QIDLSEQD--EVSQTLLETFKCVPAFIP--PELFSKFYHGFCKQHLWPLFHYMLPLSPDL 109
+ D + + + T+ +K A IP E FYH K+ WP+ H P
Sbjct: 49 EHDENSGETFDSHMTVPAEYKLTAARIPLSKEQVDIFYHITSKEAFWPILH-TFPER--- 104
Query: 110 GGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFF 169
+F WQ ++ VN+ FA+ + + VWVHDY+L ++P ++R+ +K+ FF
Sbjct: 105 -FQFREDDWQVFLKVNRAFAEAACLE-AAEGATVWVHDYNLWLVPGYIRQLRPDLKIAFF 162
Query: 170 LHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSK---- 225
H+PFPS++++ LP R++++ +LL D IGFH Y +F+ ++ + S+
Sbjct: 163 HHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVD 222
Query: 226 -------------RGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF 272
R L+ R V + PVG +++S L + ++ +
Sbjct: 223 PRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSEL 282
Query: 273 KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQS 332
G ++L + +D KGI KL A E+LL + P GK+ LV PA E+Q
Sbjct: 283 AGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQG 342
Query: 333 ETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYI 392
+ V RIN F R G+ P+ L + E A++ +A+ +T +RDG+NL+ EY+
Sbjct: 343 QIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYV 402
Query: 393 ICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALG 452
+ GL +LV+SEF G + L GA+ NP++ + E + AL
Sbjct: 403 AAQ----------GLL-----DGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALA 447
Query: 453 VSDAEKQMRHEKHYRYVSTHDVAYWARSFL 482
+ AE+Q R + + V+ +DV WA FL
Sbjct: 448 MPKAEQQARMREMFDAVNYYDVQRWADEFL 477
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 155 bits (395), Expect = 9e-43
Identities = 80/274 (29%), Positives = 124/274 (45%), Gaps = 19/274 (6%)
Query: 518 LSIDHIVSAYKRTKNRAILLDYDGTI--MVPGSISTSPNAEAVAILDNLCRDPKNVVFLV 575
L + ++ Y + R + LDYDGT+ +VP + P+ +++L +L DP+NVV ++
Sbjct: 4 LQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAII 63
Query: 576 SGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTE 635
SG+ L F G+G+ AEHG VR G W D W + +++ Y E
Sbjct: 64 SGRSLAELERLFG-VPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVE 122
Query: 636 TTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQ 695
T GS IE K A+ +++ A+ D G+ A L + L + V G +VE++P
Sbjct: 123 RTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELK---LRVTPGKMVVELRPP 179
Query: 696 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACT 755
GV+KG M + F + GDD +DED F + +
Sbjct: 180 GVSKGAAI---KYIMDELPFDGRFPIFAGDDLTDEDAFAAVNK----------LDSITVK 226
Query: 756 VGQKPSKAKYYLDDTAEILRMLLGLAEASAQDAC 789
VG ++AK+ L LR L L EA +A
Sbjct: 227 VGVGSTQAKFRLAGVYGFLRSLYKLLEALGNEAR 260
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 9e-26
Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 17/251 (6%)
Query: 531 KNRAILLDYDGTI--MVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEW-F 587
+ RA DYDGT+ +VP + + + IL L P N ++++SG R L +W
Sbjct: 2 RKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISG--RKFLEKWLG 59
Query: 588 SSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKES 647
GLG+A EHG ++ N ++ SWK A + + T G IE K
Sbjct: 60 VKLPGLGLAGEHGCEMKDNGSCQDWVNLTEKIPSWKVRANELREEITTR-PGVFIERKGV 118
Query: 648 ALVWNF-QYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQ 706
AL W++ Q P+ +AKEL E +L+ + V G +VE+KP+ VNKG + +
Sbjct: 119 ALAWHYRQAPVPELARFRAKELK---EKILSFTDLEVMDGKAVVELKPRFVNKGEIVKRL 175
Query: 707 LETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYY 766
L G+ P + +GDD +DED F V+ + PV G K + AK++
Sbjct: 176 LWHQPGSGISP---VYLGDDITDEDAFRVVNNQWGNYGFYPVPIG----SGSKKTVAKFH 228
Query: 767 LDDTAEILRML 777
L ++L L
Sbjct: 229 LTGPQQVLEFL 239
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|233434 TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 6e-14
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 13/206 (6%)
Query: 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGL 593
+ D DGT++ P + SP E + L+ L VV V+G+ + E L
Sbjct: 1 LLFFDLDGTLLDPNAHELSP--ETIEALERLREAGVKVVL-VTGRSLAEIKELLKQL-PL 56
Query: 594 GIAAEHGYFVRPNYGVDWETCVSVPDF--SWKQIAEPVMKLYTETTDGSTIETKESALVW 651
+ AE+G + + + V + K+ +K +E G+ IE K A+
Sbjct: 57 PLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAV-- 114
Query: 652 NFQYADPDFGSCQAKELLDHLESVLANEPV--SVKSGPNIVEVKPQGVNKGLVAQHQLET 709
Y + G ++ + LE + N+ ++ G +EV P GV+KG Q L+
Sbjct: 115 AIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKE 174
Query: 710 MHQKGMLPDFVLCIGDDRSDEDMFEV 735
++ K D +L GD +DE+MFEV
Sbjct: 175 LNGK---RDEILAFGDSGNDEEMFEV 197
|
This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class II subfamilies are characterized by a domain that is located between the second and third conserved catalytic motifs of the superfamily domain. The IIB subfamily is distinguished from the IIA subfamily (TIGR01460) by homology and the predicted secondary structure of this domain by PSI-PRED. The IIB subfamily's Class II domain has the following predicted structure: Helix-Sheet-Sheet-(Helix or Sheet)-Helix-Sheet-(variable)-Helix-Sheet-Sheet. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing OMNI|TC0379 and OMNI|SA2196 whose relationship to the other groups is unclear [Unknown function, Enzymes of unknown specificity]. Length = 204 |
| >gnl|CDD|177812 PLN02151, PLN02151, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 54.7 bits (131), Expect = 1e-07
Identities = 64/265 (24%), Positives = 116/265 (43%), Gaps = 28/265 (10%)
Query: 531 KNRAILLDYDGTIMVPGSISTSPN-AEAVAILDNLCRDPKNV--VFLVSGKDRDTLAEWF 587
K + LDYDGT+ I P+ A + N R +VSG+ R+ ++ +
Sbjct: 97 KQIVMFLDYDGTL---SPIVDDPDRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFV 153
Query: 588 SSCEGLGIAAEHGYFVR-----PNYGVDWETCVSVPDFSWKQIAEPVMKLY---TETTDG 639
E L A HG ++ Y + ++ + P + + V K T++ G
Sbjct: 154 KLTE-LYYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPG 212
Query: 640 STIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEP-VSVKSGPNIVEVKPQ-GV 697
+ +E + +F+ + + S +L + + SVL N P + + G ++E++P
Sbjct: 213 AKVENNKFCASVHFRCVEENKWS----DLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKW 268
Query: 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG 757
+KG + LE++ F + IGDDR+DED F++++ G L + +A
Sbjct: 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQG--LGILVSKYA---- 322
Query: 758 QKPSKAKYYLDDTAEILRMLLGLAE 782
K + A Y L + E++ L L E
Sbjct: 323 -KETNASYSLQEPDEVMEFLERLVE 346
|
Length = 354 |
| >gnl|CDD|182291 PRK10187, PRK10187, trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 2e-07
Identities = 68/276 (24%), Positives = 113/276 (40%), Gaps = 57/276 (20%)
Query: 530 TKNRAILLDYDGTIMVPGSISTSPNAEAV--AILDNLCR--DPKN-VVFLVSGK---DRD 581
+ N A D DGT+ I P+ V IL L + + L+SG+ + D
Sbjct: 12 SANYAWFFDLDGTL---AEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELD 68
Query: 582 TLAEWFSSCEGLGIAAEHGYFVRPNYGVDWET-CVSVPDFSWKQIAEPVMKLYTETT--D 638
LA+ + +A HG R G +T V +PD + I+ +L+T
Sbjct: 69 ALAKPYR----FPLAGVHGAERRDING---KTHIVHLPDAIARDISV---QLHTALAQLP 118
Query: 639 GSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLA--------NEPVSVKSGPNIV 690
G+ +E K A +++ QA + H +++LA ++++ G +V
Sbjct: 119 GAELEAKGMAFALHYR---------QAPQ---HEDALLALAQRITQIWPQLALQPGKCVV 166
Query: 691 EVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAE 750
E+KP+G NKG ++ G P FV GDD +DE F V+ + G S+
Sbjct: 167 EIKPRGTNKGEAIAAFMQEAPFAGRTPVFV---GDDLTDEAGFAVV-NRLGGISVK---- 218
Query: 751 VFACTVGQKPSKAKYYLDDTAEILRMLLGLAEASAQ 786
VG ++A + L ++ L + A Q
Sbjct: 219 -----VGTGATQASWRLAGVPDVWSWLEMITTAQQQ 249
|
Length = 266 |
| >gnl|CDD|215317 PLN02580, PLN02580, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-06
Identities = 76/294 (25%), Positives = 126/294 (42%), Gaps = 56/294 (19%)
Query: 519 SIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDP-KNV-----V 572
S + I + + + K A+ LDYDGT+ I P+ A++ + R KNV
Sbjct: 107 SFEQIAN-FAKGKKIALFLDYDGTL---SPIVDDPDR---ALMSDAMRSAVKNVAKYFPT 159
Query: 573 FLVSGKDRDTLAEWFSSCEGLGIAAEHGY----FVRPNYGVDWETCVSVPDFSWKQI--- 625
++SG+ RD + E E L A HG VR + D C+ D K++
Sbjct: 160 AIISGRSRDKVYELVGLTE-LYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLF 218
Query: 626 ---------AEPVMKLYTETTD---GSTIETKESALVWNFQYADPDFGSCQAKELLDHLE 673
+ V + E+T G+ +E + + +++ D A+ + D L+
Sbjct: 219 QPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLK 278
Query: 674 SVLANEP-VSVKSGPNIVEVKPQ-GVNKGLVAQHQLETM---HQKGMLPDFVLCIGDDRS 728
P + + G ++EV+P NKG + LE++ + +LP + IGDDR+
Sbjct: 279 ----KYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIY---IGDDRT 331
Query: 729 DEDMFEVIKSAAAGPSL--SPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGL 780
DED F+V++ G + S V K S A Y L D +E++ L L
Sbjct: 332 DEDAFKVLREGNRGYGILVSSVP---------KESNAFYSLRDPSEVMEFLKSL 376
|
Length = 384 |
| >gnl|CDD|178591 PLN03017, PLN03017, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 7e-06
Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 49/278 (17%)
Query: 529 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNV-----VFLVSGKDRDT- 582
R K + LDYDGT+ I P+ ++ + R K + +V+G+ D
Sbjct: 108 RGKQIVMFLDYDGTL---SPIVDDPDKAFMS--SKMRRTVKKLAKCFPTAIVTGRCIDKV 162
Query: 583 -----LAE-WFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVP--------DFSWKQIAEP 628
LAE +++ G+ I F R + ++ + P D ++Q+ E
Sbjct: 163 YNFVKLAELYYAGSHGMDIKGPAKGFSR--HKRVKQSLLYQPANDYLPMIDEVYRQLLEK 220
Query: 629 VMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEP-VSVKSGP 687
T++T G+ +E + +F+ D S EL+ + SVL N P + + G
Sbjct: 221 -----TKSTPGAKVENHKFCASVHFRCVDEKKWS----ELVLQVRSVLKNFPTLKLTQGR 271
Query: 688 NIVEVKPQ-GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLS 746
+ E++P +KG + LE++ F + IGDDR+DED F++++ G
Sbjct: 272 KVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEG---- 327
Query: 747 PVAEVFACTVGQKP--SKAKYYLDDTAEILRMLLGLAE 782
F V + P + A Y L D +E++ L L E
Sbjct: 328 -----FGILVSKFPKDTDASYSLQDPSEVMDFLARLVE 360
|
Length = 366 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 664 QAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCI 723
EL L+ + + SGP +E+ P+GV+KG + + + G+ + V+
Sbjct: 152 DLDELEKELKELFGSLITITSSGPGYLEIMPKGVSKGTALKALAKHL---GIDLEEVIAF 208
Query: 724 GDDRSDEDMFEV 735
GD +D +M E+
Sbjct: 209 GDGENDIEMLEL 220
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 4e-04
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 667 ELLDHLESVLANEPVSV-KSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD 725
EL++ L + ++V SGP +++ P+GV+KG Q + + G+ + V+ GD
Sbjct: 157 ELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGD 213
Query: 726 DRSDEDMFEVI 736
+D +M EV
Sbjct: 214 STNDIEMLEVA 224
|
Length = 264 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 803 | |||
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 99.98 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 99.98 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 99.97 | |
| PLN03017 | 366 | trehalose-phosphatase | 99.97 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 99.97 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.97 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.97 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.95 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.95 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.95 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.95 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.94 | |
| PLN02887 | 580 | hydrolase family protein | 99.94 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.94 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.93 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.92 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.92 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.92 | |
| PLN02316 | 1036 | synthase/transferase | 99.92 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.92 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.92 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.92 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.91 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.91 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.91 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.91 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.9 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.9 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.9 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.9 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.9 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.9 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.9 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.9 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.9 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.89 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.89 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.88 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.88 | |
| PLN00142 | 815 | sucrose synthase | 99.88 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.88 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.88 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.88 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.87 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.87 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.87 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.87 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.87 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.86 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.86 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.86 | |
| PLN02423 | 245 | phosphomannomutase | 99.86 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.86 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.86 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.85 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.85 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.85 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.85 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.84 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.84 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.84 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.84 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.83 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.83 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.83 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.82 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.82 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.82 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.81 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.81 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.81 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.81 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.81 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.81 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.81 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.81 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.81 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.81 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.81 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.8 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.8 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.79 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.79 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.78 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.78 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.77 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.77 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 99.76 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.75 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.74 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.74 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.74 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.72 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.72 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.72 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.71 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.69 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.67 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.65 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.59 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.56 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.55 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.45 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.42 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.29 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.25 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.24 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.2 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.2 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.19 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.15 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.14 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.11 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.1 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.09 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.05 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 98.97 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.92 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 98.9 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.88 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.88 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 98.87 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.81 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 98.8 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.79 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 98.77 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.68 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.68 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 98.65 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 98.61 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.58 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 98.57 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 98.55 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.55 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 98.55 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.52 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 98.51 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.48 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 98.45 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 98.45 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.43 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 98.43 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.39 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.36 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.29 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.28 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 98.24 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 98.22 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 98.21 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.2 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 98.2 | |
| PRK06769 | 173 | hypothetical protein; Validated | 98.2 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 98.17 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 98.15 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.14 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.11 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 98.09 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 98.09 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.09 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.04 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 98.03 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 98.01 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 98.0 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.97 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 97.96 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 97.94 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 97.9 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 97.87 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 97.84 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.79 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.74 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 97.74 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 97.69 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 97.67 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 97.64 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.63 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 97.62 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 97.54 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 97.54 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.54 | |
| PLN02940 | 382 | riboflavin kinase | 97.49 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 97.35 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 97.32 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 97.24 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 97.15 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 97.13 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.12 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 97.11 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 97.07 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 97.07 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 97.04 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.99 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 96.98 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 96.9 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.89 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 96.86 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 96.86 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 96.83 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 96.81 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.76 | |
| PRK08238 | 479 | hypothetical protein; Validated | 96.74 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 96.73 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 96.72 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.71 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 96.62 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 96.55 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 96.55 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 96.55 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 96.48 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 96.41 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 96.4 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 96.34 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 96.33 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 96.29 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 96.2 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 96.1 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 95.9 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 95.87 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 95.83 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 95.74 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 95.72 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.7 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 95.61 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 95.58 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 95.55 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 95.54 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 95.42 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 95.25 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.23 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 95.19 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 95.18 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 95.17 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 95.05 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 95.03 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 95.01 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 95.01 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 94.98 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 94.98 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 94.76 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 94.61 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 94.6 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 94.58 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.47 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 94.2 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 94.12 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 94.11 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 94.08 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 93.93 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 93.88 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 93.6 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 93.54 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 93.51 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 93.44 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 93.39 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 93.19 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 92.93 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.93 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 92.91 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 92.9 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 92.83 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 92.7 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 92.6 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 92.45 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 92.43 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 92.36 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 92.26 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 92.18 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 92.04 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 91.7 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 91.43 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 90.94 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 90.77 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 90.41 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 90.14 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 90.04 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 89.59 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 89.3 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 89.08 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 88.61 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 88.21 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 88.09 | |
| PLN02811 | 220 | hydrolase | 87.72 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 87.6 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 87.27 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 86.97 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 86.49 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 86.31 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 86.08 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 85.83 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 85.55 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 84.53 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 84.04 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 83.56 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 83.47 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 83.08 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 83.04 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 82.46 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 82.38 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 82.2 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 81.97 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 81.66 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 80.54 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 80.48 |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-167 Score=1472.50 Aligned_cols=786 Identities=80% Similarity=1.350 Sum_probs=729.5
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCC-CCceEEEeecCCcCCchhhhHHHHhhhcCceEEEeeCC
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGE-DVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIP 79 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~ 79 (803)
|||||||||+.++++++++++|.|++++|||+++|.+++.+ ..+++||||+|.++++++++++.+.++++|+|+|||++
T Consensus 62 liiVsnrlPv~~~~~~~g~~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~ 141 (854)
T PLN02205 62 IIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLP 141 (854)
T ss_pred EEEEEccCceEEEEcCCCCcceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCC
Confidence 69999999999998765556899999999999999987754 37899999999888888888887778889999999999
Q ss_pred hhhhhhhhhcccccccccccccCCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHh
Q 003682 80 PELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRK 159 (803)
Q Consensus 80 ~~~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~ 159 (803)
+++++.||+||||++|||+|||+++..|+++.+|+++.|++|++||++||++|++.++|++|+|||||||||+||.+||+
T Consensus 142 ~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~ 221 (854)
T PLN02205 142 PDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRK 221 (854)
T ss_pred HHHHHHHHHhhhhccccchhccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHh
Confidence 99999999999999999999999877776667899999999999999999999999998669999999999999999999
Q ss_pred hCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEE
Q 003682 160 RFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 239 (803)
Q Consensus 160 ~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~ 239 (803)
++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++....+.+.+.++||.++
T Consensus 222 ~~~~~~IgfFlHiPFPs~eifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~ 301 (854)
T PLN02205 222 RFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVS 301 (854)
T ss_pred hCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999888777788999999999
Q ss_pred EeEecccCChhHHHHHhCCchHHHHHHHHHHHhC--CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 003682 240 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQFK--GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIA 317 (803)
Q Consensus 240 v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~--~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~ 317 (803)
|+++|+|||++.|...+..+++..++++++++++ ++++|++|||+|+.|||.++|+||++||++||+++++++||||+
T Consensus 302 v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia 381 (854)
T PLN02205 302 IKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIA 381 (854)
T ss_pred EEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEe
Confidence 9999999999999999999999999999999995 69999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecC
Q 003682 318 NPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 318 ~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~ 397 (803)
+|+|+++++|++++++++++|++||++||+.+|.||+|+.+.++++|+.|||++|||+++||+|||||||++||+|||++
T Consensus 382 ~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~ 461 (854)
T PLN02205 382 NPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQG 461 (854)
T ss_pred cCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CcccccccCCCCCCCCCceEEecccccccccCCCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHH
Q 003682 398 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYW 477 (803)
Q Consensus 398 ~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W 477 (803)
++++...++.+..++++|+||+|||+||+++|.+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+.+|
T Consensus 462 ~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W 541 (854)
T PLN02205 462 NEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYW 541 (854)
T ss_pred ccccccccccccccCCCCceEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHH
Confidence 76666666666666789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccccccCcCcceeEeecCccccCCCHHHHHHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHH
Q 003682 478 ARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEA 557 (803)
Q Consensus 478 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~ 557 (803)
+++||++|.++++++....|+++|+|++||+++++++|++|+++.+.++|+++++|+|++||||||++..+....+++++
T Consensus 542 ~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~ 621 (854)
T PLN02205 542 ARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKS 621 (854)
T ss_pred HHHHHHHHHHHHHHHhhhhhcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHH
Confidence 99999999999887777789999999999999999999999999999999999999999999999998543356889999
Q ss_pred HHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcC
Q 003682 558 VAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETT 637 (803)
Q Consensus 558 ~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~ 637 (803)
+++|++||.++|+.|+|+|||++..++++++.+++++++++||++++.+++..|....+..+..|++.+..+++.|++++
T Consensus 622 ~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ert 701 (854)
T PLN02205 622 IDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETT 701 (854)
T ss_pred HHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999987767899999999999888778876544445679999999999999999
Q ss_pred CCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCc
Q 003682 638 DGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLP 717 (803)
Q Consensus 638 ~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~ 717 (803)
||+++|.|+.++.|||+.++++++..+++++.++++..+.+.+..+.+|+.++||+|+++|||.|++++++.+...|+++
T Consensus 702 pGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~ 781 (854)
T PLN02205 702 DGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLP 781 (854)
T ss_pred CchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999988888899999999988888788899999999999999999999999986543338899
Q ss_pred ccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeCCHhHHHHHHHHHHHhhcc
Q 003682 718 DFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLAEASAQ 786 (803)
Q Consensus 718 d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~~~~ev~~~L~~l~~~~~~ 786 (803)
++++||||+.||++||+.++.......++..++.|+|+||.++|+|+|+++++++|.++|+.|++.+.+
T Consensus 782 d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~~~~ 850 (854)
T PLN02205 782 DFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASVSEQ 850 (854)
T ss_pred ccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhcchh
Confidence 999999999999999999985322223344456799999999999999999999999999999976543
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-151 Score=1324.20 Aligned_cols=744 Identities=37% Similarity=0.682 Sum_probs=664.3
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCch-hhhHHHHhhhcCceEEEeeCC
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLS-EQDEVSQTLLETFKCVPAFIP 79 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv~~~ 79 (803)
|||||||||+.++++++ |.|.++++.|||+++|.+ + +..+++||||+|..++++ +++.+... +.+|+|+||||+
T Consensus 96 lIiVSNRlPv~~~~~~~--g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~~-l~~~~~~pV~l~ 170 (934)
T PLN03064 96 LLVVANRLPVSAVRRGE--DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTKA-LAEKRCIPVFLD 170 (934)
T ss_pred EEEEECCCCcceeecCC--CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHHH-hccCceEEEeCC
Confidence 69999999999988765 689999999999999976 4 478999999999876654 44555444 578999999999
Q ss_pred hhhhhhhhhcccccccccccccCCC-CCC-CCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHH
Q 003682 80 PELFSKFYHGFCKQHLWPLFHYMLP-LSP-DLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFL 157 (803)
Q Consensus 80 ~~~~~~~y~~~~~~~lwp~~H~~~~-~~~-~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~l 157 (803)
+++++.||+||||++|||+|||++. ..+ ....+|+++.|++|++||++||++|++.++| +|+|||||||||+||+||
T Consensus 171 ~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-gD~VWVHDYHL~LlP~~L 249 (934)
T PLN03064 171 EEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEE-GDVVWCHDYHLMFLPKCL 249 (934)
T ss_pred HHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHH
Confidence 9999999999999999999999731 110 0114678899999999999999999999998 599999999999999999
Q ss_pred HhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeE
Q 003682 158 RKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRT 237 (803)
Q Consensus 158 r~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~ 237 (803)
|+++|+++||||||||||++|+|||||+|++||+|||+||+|||||++|++||+++|.|++|++.... .+.++||.
T Consensus 250 R~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~----~v~~~Gr~ 325 (934)
T PLN03064 250 KEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVEDQGRL 325 (934)
T ss_pred HHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCC----eEEECCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999886443 48899999
Q ss_pred EEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 003682 238 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIA 317 (803)
Q Consensus 238 ~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~ 317 (803)
++|.++|+|||++.|...+..+++.+++++++++++++++|++|||||+.|||.++|+||++||++||+|+++++||||+
T Consensus 326 v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa 405 (934)
T PLN03064 326 TRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIA 405 (934)
T ss_pred EEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecC
Q 003682 318 NPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 318 ~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~ 397 (803)
+|+|+++++|+++++++.++|++||++||+.+|.||+|+.+.++++++.++|++|||||+||++||||||++||||||..
T Consensus 406 ~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~ 485 (934)
T PLN03064 406 VPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDS 485 (934)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred CcccccccCCCCCCCCCceEEecccccccccC-CCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHH
Q 003682 398 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAY 476 (803)
Q Consensus 398 ~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~ 476 (803)
+.|++|+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+.+
T Consensus 486 ---------------~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~ 550 (934)
T PLN03064 486 ---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQE 550 (934)
T ss_pred ---------------CCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHH
Confidence 47999999999999999 58999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCcCcceeEeecCccccCCCHHHHHHHHHhcCCeEEEEecCCcCCCCCCC-------
Q 003682 477 WARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSI------- 549 (803)
Q Consensus 477 W~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~------- 549 (803)
|+++|+++|.++..++... ... -++.|+.+.+.++|++++.++||+||||||++..+.
T Consensus 551 Wa~~fl~~L~~~~~~~~~~------------~~~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~ 615 (934)
T PLN03064 551 WAETFVSELNDTVVEAQLR------------TRQ---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQ 615 (934)
T ss_pred HHHHHHHHHHHHHhhhhcc------------ccc---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCccccccc
Confidence 9999999999876543210 001 134789999999999999999999999999985422
Q ss_pred ----CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCceeEEe-ecCCCCccHHH
Q 003682 550 ----STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWET-CVSVPDFSWKQ 624 (803)
Q Consensus 550 ----~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~~~~~-~~~~~~~~~~~ 624 (803)
...++++++++|++||.++++.|+|+|||+.+.++++++.+ +++++++||++++.++ ..|.. .....+..|++
T Consensus 616 ~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~~-~~w~~~~~~~~~~~W~~ 693 (934)
T PLN03064 616 IKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHTK-GEWMTTMPEHLNMDWVD 693 (934)
T ss_pred ccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecCC-CcceeccccccchHHHH
Confidence 33478999999999999999999999999999999999876 7999999999998764 46873 33333568999
Q ss_pred HHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHH-HHhcCCCeEEEECCeEEEEEeCCCCHHHHH
Q 003682 625 IAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLE-SVLANEPVSVKSGPNIVEVKPQGVNKGLVA 703 (803)
Q Consensus 625 ~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~-~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al 703 (803)
.+..++++|++++||+++|.|+++++|||+.+||+++..|++++.+++. ..+.+.++.+..|+.++||+|.++|||.|+
T Consensus 694 ~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av 773 (934)
T PLN03064 694 SVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAI 773 (934)
T ss_pred HHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999984 445566789999999999999999999999
Q ss_pred HHHHHHhhhCC---CCcccEEEEeCChh-hHHHHHHcchhcCC------------------------------CCC----
Q 003682 704 QHQLETMHQKG---MLPDFVLCIGDDRS-DEDMFEVIKSAAAG------------------------------PSL---- 745 (803)
Q Consensus 704 ~~ll~~l~~~g---i~~d~vla~GD~~N-Di~Mf~~ag~s~a~------------------------------~~~---- 745 (803)
+.+++++...+ .++|+|+|+||+.. |++||+++...... .+.
T Consensus 774 ~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 853 (934)
T PLN03064 774 DRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQ 853 (934)
T ss_pred HHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccccc
Confidence 99999763221 35899999999875 99999998642110 000
Q ss_pred ----------------------------C----------CCcceEEEEeCCCCccceeEeCCHhHHHHHHHHHHHhhcc
Q 003682 746 ----------------------------S----------PVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLAEASAQ 786 (803)
Q Consensus 746 ----------------------------~----------~~~~~~~v~vG~~~s~A~~~v~~~~ev~~~L~~l~~~~~~ 786 (803)
+ ...+.|+|+||.+.+.|+|++++.+||..+|+.|++....
T Consensus 854 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (934)
T PLN03064 854 GKKQRSLLSSAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASSS 932 (934)
T ss_pred cccCCcccccccccccccccCCccccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhccccC
Confidence 0 1234599999999999999999999999999999987643
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-143 Score=1274.50 Aligned_cols=743 Identities=37% Similarity=0.685 Sum_probs=658.2
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCch-hhhHHHHhhhcCceEEEeeCC
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLS-EQDEVSQTLLETFKCVPAFIP 79 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv~~~ 79 (803)
|||||||||+.++++++ |+|+++++.|||+++|.+. . ..+++||||+|.+++++ ++..+.. .+.+++|+||||
T Consensus 13 liiVsnrlp~~~~~~~~--~~~~~~~~~ggl~~al~~~-~-~~~~~Wvgw~g~~~~~~~~~~~~~~-~~~~~~~~pv~l- 86 (797)
T PLN03063 13 LLVVANRLPVSAKRTGE--DSWSLEMSPGGLVSALLGV-K-EFETKWIGWPGVDVHDEIGKAALTE-SLAEKGCIPVFL- 86 (797)
T ss_pred EEEEECCCCccceecCC--CceEEeeCCCCHHHHHHHH-H-hcCceEEEeCCCcCCcccchhHHHH-HhhcCCeEEeeh-
Confidence 69999999999887654 6999999999999999864 4 57999999999866554 3334443 457899999999
Q ss_pred hhhhhhhhhcccccccccccccCC-CCCCC-CCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHH
Q 003682 80 PELFSKFYHGFCKQHLWPLFHYML-PLSPD-LGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFL 157 (803)
Q Consensus 80 ~~~~~~~y~~~~~~~lwp~~H~~~-~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~l 157 (803)
+++++.||+||||++|||+|||+. +..+. ...++.++.|++|++||++||++|++.++| +|+|||||||||+||+||
T Consensus 87 ~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWvhDYhL~llp~~l 165 (797)
T PLN03063 87 NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEE-GDVVWCHDYHLMFLPQYL 165 (797)
T ss_pred HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhhHHHHH
Confidence 999999999999999999999982 21111 113566789999999999999999999998 599999999999999999
Q ss_pred HhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeE
Q 003682 158 RKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRT 237 (803)
Q Consensus 158 r~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~ 237 (803)
|+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||+++|++++|++.... .+.++|+.
T Consensus 166 R~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~~~gr~ 241 (797)
T PLN03063 166 KEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVDQGKV 241 (797)
T ss_pred HHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceEECCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999876543 37799999
Q ss_pred EEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 003682 238 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIA 317 (803)
Q Consensus 238 ~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~ 317 (803)
++|.++|+|||++.|.+....+++......++++++++++|++|||+++.||+..+|+||++|++++|+++++++|+|++
T Consensus 242 ~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia 321 (797)
T PLN03063 242 TRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIA 321 (797)
T ss_pred EEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEe
Confidence 99999999999999998777777777788889889999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecC
Q 003682 318 NPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 318 ~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~ 397 (803)
.|+|+++++|+++++++++++++||++||+..|.||+++.+.++.+++.++|++|||||+||++||||||++|||||+.+
T Consensus 322 ~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p 401 (797)
T PLN03063 322 VPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKA 401 (797)
T ss_pred cCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CcccccccCCCCCCCCCceEEecccccccccC-CCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHH
Q 003682 398 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAY 476 (803)
Q Consensus 398 ~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~ 476 (803)
+.|++|+||++|+++++ .+|++|||||++++|+||.++|+|+++||+.|++++++++.+|++.+
T Consensus 402 ---------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 466 (797)
T PLN03063 402 ---------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQK 466 (797)
T ss_pred ---------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHH
Confidence 37999999999999999 47999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCcCcceeEeecCccccCCCHHHHHHHHHhcCCeEEEEecCCcCCCCCC-----CCC
Q 003682 477 WARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGS-----IST 551 (803)
Q Consensus 477 W~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~-----~~~ 551 (803)
|+++|+++|.++.+++.... ...+..|+.+.+.++|++++.++|++||||||++..+ ...
T Consensus 467 Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~~a 531 (797)
T PLN03063 467 WADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEMDL 531 (797)
T ss_pred HHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccccccC
Confidence 99999999999876542110 1234578999999999999999999999999998532 235
Q ss_pred CCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCceeEEeec-CCCCccHHHHHHHHH
Q 003682 552 SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCV-SVPDFSWKQIAEPVM 630 (803)
Q Consensus 552 ~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~~~~~~~-~~~~~~~~~~~~~i~ 630 (803)
.++++++++|++||.++++.|+|+|||+.+.++++++.. +++++++||++++.. +..|.... ...+..|++.+..++
T Consensus 532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~~v~~~l 609 (797)
T PLN03063 532 GLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVDGVKNVF 609 (797)
T ss_pred CCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHHHHHHHH
Confidence 588999999999999999999999999999999999865 799999999999865 34787543 223567999999999
Q ss_pred HHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHH-HhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHH
Q 003682 631 KLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLES-VLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLET 709 (803)
Q Consensus 631 ~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~-~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~ 709 (803)
++|++++||+++|.|++++.|||+.+||+++..++.++.+++.+ .+.+.++.+..|+.++||+|.++|||.|++.++++
T Consensus 610 ~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~ 689 (797)
T PLN03063 610 KYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGE 689 (797)
T ss_pred HHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999988899999998844 34566789999999999999999999999999997
Q ss_pred hhhC---CCCcccEEEEeCCh-hhHHHHHHcchhcCC--------CC-----------CCCCcceEEEEeCCCCccceeE
Q 003682 710 MHQK---GMLPDFVLCIGDDR-SDEDMFEVIKSAAAG--------PS-----------LSPVAEVFACTVGQKPSKAKYY 766 (803)
Q Consensus 710 l~~~---gi~~d~vla~GD~~-NDi~Mf~~ag~s~a~--------~~-----------~~~~~~~~~v~vG~~~s~A~~~ 766 (803)
+... +..+|+|+|+||+. .|++||++.+..... .. .....++|+|+||.++|+|+|+
T Consensus 690 ~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~~s~A~y~ 769 (797)
T PLN03063 690 IVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQARTKARYV 769 (797)
T ss_pred hhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECCCCccCeec
Confidence 5211 23679999999985 599999988642100 00 1123467999999999999999
Q ss_pred eCCHhHHHHHHHHHHHhhcc
Q 003682 767 LDDTAEILRMLLGLAEASAQ 786 (803)
Q Consensus 767 v~~~~ev~~~L~~l~~~~~~ 786 (803)
+++++||.++|+.|++.+++
T Consensus 770 l~~~~eV~~lL~~l~~~~~~ 789 (797)
T PLN03063 770 LDSSNDVVSLLHKLAVANTT 789 (797)
T ss_pred CCCHHHHHHHHHHHhccCcc
Confidence 99999999999999986554
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-137 Score=1230.83 Aligned_cols=718 Identities=37% Similarity=0.668 Sum_probs=651.9
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCc---hhhhHHHHhhhcCceEEEee
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDL---SEQDEVSQTLLETFKCVPAF 77 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~---~~~~~~~~~~~~~~~~~pv~ 77 (803)
|||||||||+.+++++ |+|++++++|||+++|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+|||
T Consensus 3 livvsnr~p~~~~~~~---~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v~ 77 (726)
T PRK14501 3 LIIVSNRLPVTVVRED---GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPVF 77 (726)
T ss_pred EEEEEcCCCcceeecC---CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEEe
Confidence 6999999999988764 589999999999999987655 5899999999976544 2223333 346789999999
Q ss_pred CChhhhhhhhhcccccccccccccCCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHH
Q 003682 78 IPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFL 157 (803)
Q Consensus 78 ~~~~~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~l 157 (803)
+++++++.||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++| +|+||||||||++||++|
T Consensus 78 l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~-~d~vwvhDYhl~l~p~~l 151 (726)
T PRK14501 78 LSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARP-GDVVWVHDYQLMLLPAML 151 (726)
T ss_pred CCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCchhhhHHHHH
Confidence 9999999999999999999999999876 5799999999999999999999999998 599999999999999999
Q ss_pred HhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeE
Q 003682 158 RKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRT 237 (803)
Q Consensus 158 r~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~ 237 (803)
|++.|+++||||||||||++++|++||+|++|++|||+||+|||||++|++||+++|.++++++.... .+.++|+.
T Consensus 152 r~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~----~~~~~gr~ 227 (726)
T PRK14501 152 RERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG----EIRLGGRI 227 (726)
T ss_pred HhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCC----eEEECCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999775432 57899999
Q ss_pred EEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 003682 238 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIA 317 (803)
Q Consensus 238 ~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~ 317 (803)
++|.++|+|||++.|.+...++.+.+..+++++.++++++|++|||+++.||+..+|+||++|++++|+++++++|+||+
T Consensus 228 ~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~ 307 (726)
T PRK14501 228 VRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVA 307 (726)
T ss_pred EEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEe
Confidence 99999999999999998887777777788888888899999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecC
Q 003682 318 NPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 318 ~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~ 397 (803)
.|+|.+.++|+++++++++++++||++||+.+|.|++++.+.+++++++++|++|||||+||++||||||++||||||.+
T Consensus 308 ~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~ 387 (726)
T PRK14501 308 VPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTD 387 (726)
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCC
Confidence 99988889999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CcccccccCCCCCCCCCceEEecccccccccCCCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHH
Q 003682 398 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYW 477 (803)
Q Consensus 398 ~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W 477 (803)
+.|++|+|+++|+++++.+|++|||+|++++|+||.++|+|+.++++.|++++++++.++|+.+|
T Consensus 388 ---------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w 452 (726)
T PRK14501 388 ---------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKW 452 (726)
T ss_pred ---------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHH
Confidence 36899999999999999899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccccccCcCcceeEeecCccccCCCHHHHHHHHHhcCCeEEEEecCCcCCCCC--CCCCCCCH
Q 003682 478 ARSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPG--SISTSPNA 555 (803)
Q Consensus 478 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~kli~~DlDGTLl~~~--~~~~~is~ 555 (803)
+++|++.+.++.+++... . ...++.++.+.+.++|+.++.|+|++|+||||++.. +....+++
T Consensus 453 ~~~~l~~l~~~~~~~~~~-----------~----~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~ 517 (726)
T PRK14501 453 ASDFLDELREAAEKNKAF-----------A----SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDK 517 (726)
T ss_pred HHHHHHHHHHHHhhhhcc-----------c----cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCCH
Confidence 999999999987654211 0 123567899999999999999999999999999843 23456889
Q ss_pred HHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhh
Q 003682 556 EAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTE 635 (803)
Q Consensus 556 ~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~ 635 (803)
+++++|++|++++|+.|+|+|||+...++++++.+ +++++++||++++.++ ..|..... .+..|++.+.++++.|.+
T Consensus 518 ~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~~-~~w~~~~~-~~~~w~~~v~~il~~~~~ 594 (726)
T PRK14501 518 ELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAPG-GEWQLLEP-VATEWKDAVRPILEEFVD 594 (726)
T ss_pred HHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCCC-CceEECCC-cchhHHHHHHHHHHHHHh
Confidence 99999999977789999999999999999999876 5789999999998664 46765432 356799999999999999
Q ss_pred cCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCC
Q 003682 636 TTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGM 715 (803)
Q Consensus 636 ~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi 715 (803)
+++|++++.++.++.|||+.++++++..+++++.+.+...+.+..+.+..|+.++||+|+++|||.|++++++ ++
T Consensus 595 ~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~-----~~ 669 (726)
T PRK14501 595 RTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE-----AG 669 (726)
T ss_pred cCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh-----cC
Confidence 9999999999999999999998888878888889998887777778888999999999999999999999998 56
Q ss_pred CcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeCCHhHHHHHHHHHHH
Q 003682 716 LPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLAE 782 (803)
Q Consensus 716 ~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~~~~ev~~~L~~l~~ 782 (803)
++++++||||+.||++||+.++. ..++|+||++++.|+|+++++++|.++|+.|++
T Consensus 670 ~~d~vl~~GD~~nDe~Mf~~~~~-----------~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 670 PYDFVLAIGDDTTDEDMFRALPE-----------TAITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred CCCEEEEECCCCChHHHHHhccc-----------CceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 78999999999999999999853 127999999999999999999999999999874
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-116 Score=1009.17 Aligned_cols=725 Identities=55% Similarity=0.965 Sum_probs=669.6
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCchhhhHHHHhhhcCceEEEeeCCh
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPP 80 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~ 80 (803)
+|+||||||+.+.+..++ +.|.|++++|||++++...+. ..+..||||.+.++++++++.+...++...+|+||++++
T Consensus 5 ~i~vsn~lp~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~ 82 (732)
T KOG1050|consen 5 IIVVSNRLPLKASKRTDT-GKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFLDD 82 (732)
T ss_pred EEEEEccCceecccccCC-CceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeecCC
Confidence 589999999998655444 799999999999999977655 678999999998889999999988899999999999999
Q ss_pred hhhhhhhhcccccccccccccC-CCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHh
Q 003682 81 ELFSKFYHGFCKQHLWPLFHYM-LPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRK 159 (803)
Q Consensus 81 ~~~~~~y~~~~~~~lwp~~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~ 159 (803)
+....+|++|||++|||+|||+ .+..+... .|+.+.|++|+.+|+.||++|++.+++ +|+|||||||||++|+++|+
T Consensus 83 ~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~~-~d~vwihdyhlmllp~~lr~ 160 (732)
T KOG1050|consen 83 ELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYEE-GDIVWIHDYHLMLLPQMLRE 160 (732)
T ss_pred chhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhccC-CCcEEEEcchhhccchhhhc
Confidence 9999999999999999999999 55444433 567889999999999999999999995 79999999999999999999
Q ss_pred hCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEE
Q 003682 160 RFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 239 (803)
Q Consensus 160 ~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~ 239 (803)
+..+++||||+|.|||++|+|+|+|.|++|+.||+++|+||||+++|+|||+++|.|+++++..+..+...+.+.||.+.
T Consensus 161 ~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~ 240 (732)
T KOG1050|consen 161 RFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVS 240 (732)
T ss_pred ccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceee
Confidence 99999999999999999999999999999999999999999999999999999999999999886655666899999999
Q ss_pred EeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 003682 240 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANP 319 (803)
Q Consensus 240 v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~ 319 (803)
|.+.|+|||+.+|......+.+.....++++.++|+++|++|||+|+.||+..++.||++++++||+++++|+|+|+..|
T Consensus 241 v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~ 320 (732)
T KOG1050|consen 241 VKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENP 320 (732)
T ss_pred eeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecC
Confidence 99999999999999999989999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCc
Q 003682 320 ARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNE 399 (803)
Q Consensus 320 ~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~ 399 (803)
++++++++++++.++...+.+||++||+..+.||+++...++..++.++|.+||+++++|++|||||+++||++|+..
T Consensus 321 ~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~-- 398 (732)
T KOG1050|consen 321 KRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN-- 398 (732)
T ss_pred CcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred ccccccCCCCCCCCCceEEecccccccccC-CCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHH
Q 003682 400 KLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWA 478 (803)
Q Consensus 400 ~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~ 478 (803)
+.+++|+|+|+|+++.+ ++++++||||.++++.+|..+++|+.+++..|+...+.++..++...|+
T Consensus 399 -------------~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~ 465 (732)
T KOG1050|consen 399 -------------KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWA 465 (732)
T ss_pred -------------cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHH
Confidence 46999999999999999 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccccccCcCcceeEeecCccccCCCHHHHHHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHH
Q 003682 479 RSFLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAV 558 (803)
Q Consensus 479 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~ 558 (803)
..|++.+.+..+. |+ +.+++.. .|+.+.+...|+++++|+|++|+|||++...+.. +.
T Consensus 466 ~~~~~~l~~~~~~---------~~-~~~~~~~------~l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~------~~ 523 (732)
T KOG1050|consen 466 KSFLQGLKRIWKV---------GF-LGFRVTP------LLTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK------AI 523 (732)
T ss_pred HHHHHhhhhhhhh---------cc-ccccccc------ccChhHhhhhhhhccceEEEecccccccCCCCch------HH
Confidence 9999976665443 44 4444333 2788999999999999999999999999843221 99
Q ss_pred HHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCC
Q 003682 559 AILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTD 638 (803)
Q Consensus 559 ~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~ 638 (803)
..|+.||.++++.|+|+|||++..+..++...++++++||||++++.+++ |.... .+.+|++.+++++++|++++|
T Consensus 524 ~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~ert~ 599 (732)
T KOG1050|consen 524 SILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYTERTP 599 (732)
T ss_pred HHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999888899999999999999887 98876 678999999999999999999
Q ss_pred CceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcc
Q 003682 639 GSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPD 718 (803)
Q Consensus 639 g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d 718 (803)
|+++|.++.++.|||++++++++..||+++.++|+. .+.++.+..|+..||+.|.|+|||.++..++..+ .-++|
T Consensus 600 GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~---~~~~d 674 (732)
T KOG1050|consen 600 GSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEM---VKEPD 674 (732)
T ss_pred CceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhc---CCCcc
Confidence 999999999999999999999999999999999987 7788999999999999999999999999999998 55679
Q ss_pred cEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeCCHhHHHHHHH
Q 003682 719 FVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLL 778 (803)
Q Consensus 719 ~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~~~~ev~~~L~ 778 (803)
+++|+||+..|++||.......-..+. ...|+|++|.++|.|+|+++++.+|.++|+
T Consensus 675 f~~c~g~d~tDed~~~~~~~~~~~~~~---~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 675 FVLCIGDDRTDEDMFEFISKAKDPEKV---EEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred eEEEecCCCChHHHHHHHhhccCCccc---ceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 999999999999999998764221111 567999999999999999999999999875
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-117 Score=977.41 Aligned_cols=453 Identities=30% Similarity=0.565 Sum_probs=418.2
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCchhhhHHHHhhhcCceEEEeeCCh
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPP 80 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~ 80 (803)
|||||||+|+.. + + +.++|||+++|.+.+. ..+++||||+|...+++ +.+......+++|.||+|++
T Consensus 4 LivVSNRlp~~~-----~---~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~~--~~~~~~~~~~~~~~~v~L~~ 70 (474)
T PRK10117 4 LVVVSNRIAPPD-----E---H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNED--QPLKKVKKGNITWASFNLSE 70 (474)
T ss_pred EEEEECCCcCCC-----C---C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCCc--ccchhhhcCCceEEEecCCH
Confidence 699999999621 1 1 4567999999988765 57999999999643322 22333333579999999999
Q ss_pred hhhhhhhhcccccccccccccCCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhh
Q 003682 81 ELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKR 160 (803)
Q Consensus 81 ~~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~ 160 (803)
++++.||+||||++|||+|||+++. ..|+++.|++|++||++||++|++.++| +|+||||||||++||++||++
T Consensus 71 ~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-~D~VWVHDYhL~llp~~LR~~ 144 (474)
T PRK10117 71 QDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWIHDYHLLPFASELRKR 144 (474)
T ss_pred HHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeccHhhHHHHHHHHh
Confidence 9999999999999999999999875 5799999999999999999999999998 599999999999999999999
Q ss_pred CCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEE
Q 003682 161 FNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 240 (803)
Q Consensus 161 ~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v 240 (803)
+|+++||||||||||++|+|++||+|++|++|||+||+|||||++|++||+++|++++|++.... ..+.++||.++|
T Consensus 145 ~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v~v 221 (474)
T PRK10117 145 GVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAFRT 221 (474)
T ss_pred CCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999876432 246788999999
Q ss_pred eEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 003682 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPA 320 (803)
Q Consensus 241 ~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~ 320 (803)
+++|+|||++.|...+.++ .....++++++++++++|++|||+||+|||+++|+||++||++||+++++++|+||+.|+
T Consensus 222 ~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~ps 300 (474)
T PRK10117 222 EVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTS 300 (474)
T ss_pred EEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCC
Confidence 9999999999999887755 466788899999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcc
Q 003682 321 RGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEK 400 (803)
Q Consensus 321 ~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~ 400 (803)
|+++++|++++++++++|++||++||+.+|.||+|+.+.++++++.++|++|||+++||+|||||||++||+|||.+
T Consensus 301 R~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~--- 377 (474)
T PRK10117 301 RGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP--- 377 (474)
T ss_pred CCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999974
Q ss_pred cccccCCCCCCCCCceEEecccccccccCCCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHH
Q 003682 401 LDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 480 (803)
Q Consensus 401 ~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~ 480 (803)
+++|+||+|||+|++++|.+|++|||||++++|+||.+||+||.+||+.|++.++++|.+||+.+|+++
T Consensus 378 -----------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~ 446 (474)
T PRK10117 378 -----------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQEC 446 (474)
T ss_pred -----------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHH
Confidence 247999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 003682 481 FLQDLERACR 490 (803)
Q Consensus 481 ~l~~l~~~~~ 490 (803)
||++|.++..
T Consensus 447 fL~~L~~~~~ 456 (474)
T PRK10117 447 FISDLKQIVP 456 (474)
T ss_pred HHHHHHHhhh
Confidence 9999998753
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-116 Score=980.05 Aligned_cols=463 Identities=28% Similarity=0.480 Sum_probs=427.2
Q ss_pred EEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCchh-h-hHHHHhhhcCceEEEeeCChh
Q 003682 4 VGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSE-Q-DEVSQTLLETFKCVPAFIPPE 81 (803)
Q Consensus 4 vs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~-~-~~~~~~~~~~~~~~pv~~~~~ 81 (803)
||||||+.+++++++..+|.+++++|||+++|.+.+.+..+++||||+|...++++ . ..+......+++|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 79999999998765312487899999999999987765678999999997532211 1 112212235799999999999
Q ss_pred hhhhhhhcccccccccccccCCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhC
Q 003682 82 LFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRF 161 (803)
Q Consensus 82 ~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~ 161 (803)
+++.||+||||++|||+|||+++. ..|+++.|++|++||++||++|++.++| +|+||||||||++||++||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAE-GATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999999765 5899999999999999999999999998 5999999999999999999999
Q ss_pred CCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccC---------------
Q 003682 162 NRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKR--------------- 226 (803)
Q Consensus 162 ~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~--------------- 226 (803)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|+++....
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998765431
Q ss_pred --ceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhC
Q 003682 227 --GYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQN 304 (803)
Q Consensus 227 --~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~ 304 (803)
....+.++||.++|+++|+|||++.|.+...++++.+..+.+|++++++++|++|||+|++|||+++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 113478999999999999999999999988888888889999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCC
Q 003682 305 PSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGM 384 (803)
Q Consensus 305 p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~ 384 (803)
|+++++++||||+.|+|+++++|++++++++++|++||++||+.+|+|++++++.++++++.++|++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCCCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHH
Q 003682 385 NLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEK 464 (803)
Q Consensus 385 ~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~ 464 (803)
|||++||||||.+ ++||||+|||+|+++++.+|++|||||++++|+||.+||+||.+||+.|+++
T Consensus 395 NLVa~Eyva~~~~---------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~ 459 (487)
T TIGR02398 395 NLVAKEYVAAQGL---------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMRE 459 (487)
T ss_pred CcchhhHHhhhcC---------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999874 4799999999999999999999999999999999999999999999999999
Q ss_pred hhcccccCCHHHHHHHHHHHHHH
Q 003682 465 HYRYVSTHDVAYWARSFLQDLER 487 (803)
Q Consensus 465 ~~~~v~~~~~~~W~~~~l~~l~~ 487 (803)
++++|.+||+.+|+++||++|..
T Consensus 460 l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 460 MFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHHHhhCCHHHHHHHHHHHhhh
Confidence 99999999999999999999875
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-116 Score=981.18 Aligned_cols=466 Identities=46% Similarity=0.866 Sum_probs=358.9
Q ss_pred CEEEEccCccceEeCCCCCCC--eEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCchh--hhHHHHhhhcCceEEEe
Q 003682 1 MIIVGNQLPLRAHRSSDGSGG--WTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSE--QDEVSQTLLETFKCVPA 76 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~--~~~~~~~~~~~~~~~pv 76 (803)
|||||||||+.++++++. |. |+++.+.|||+++|.+.+. ..+++||||+|...+..+ ++.+...+.++|+|+||
T Consensus 3 livVsnrlPv~~~r~~~~-G~~~~~~~~~~ggL~~al~~l~~-~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 3 LIVVSNRLPVSVKRDPDD-GSWGWSWKPSAGGLVSALDPLLK-KRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHHH-HH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred cccccccccccccccccc-cccccccccCCCcHHHHHHHHHh-cCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 689999999999988732 45 8888899999999977544 589999999998776544 55666677899999999
Q ss_pred eCChhhhhhhhhcccccccccccccCCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHH
Q 003682 77 FIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTF 156 (803)
Q Consensus 77 ~~~~~~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~ 156 (803)
|+++++++.||+||||++|||+|||.++..+ ....|+.+.|++|++||++||++|++.++| +|+|||||||||+||++
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~-~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~~ 158 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRP-DLARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQM 158 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG-----G----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHHH
T ss_pred EcCHHHHHHHHHhhhhhccCccccccccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHHH
Confidence 9999999999999999999999999876111 126889999999999999999999999997 59999999999999999
Q ss_pred HHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCe
Q 003682 157 LRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGR 236 (803)
Q Consensus 157 lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~ 236 (803)
||+++|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||+++|++++|+++....+ .+.++||
T Consensus 159 LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~Gr 236 (474)
T PF00982_consen 159 LRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNGR 236 (474)
T ss_dssp HHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETTE
T ss_pred HHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999887765 6899999
Q ss_pred EEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCC-CEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003682 237 TVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKG-QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 315 (803)
Q Consensus 237 ~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~-~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~ 315 (803)
.++|.++|+|||++.|...+.++++.++.+++++++++ +++|++|||+|++|||.++|+||++||++||+++++++|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999999999999999999988 59999999999999999999999999999999999999999
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeee
Q 003682 316 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 395 (803)
Q Consensus 316 i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~ 395 (803)
|+.|+|.++++|++++++++++|++||++||+.+|+||+|+.+.++++++.+||++|||+++||++||||||++||+|||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCcccccccCCCCCCCCCceEEecccccccccCC-CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCH
Q 003682 396 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDV 474 (803)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~-~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~ 474 (803)
.+ ++|+||+|||+|++++|. ++++|||||++++|+||.+||+|+++||+.|+++++++|.++|+
T Consensus 397 ~~---------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~ 461 (474)
T PF00982_consen 397 DD---------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDV 461 (474)
T ss_dssp -T---------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-H
T ss_pred cC---------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCH
Confidence 85 479999999999999997 56999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 003682 475 AYWARSFLQDLER 487 (803)
Q Consensus 475 ~~W~~~~l~~l~~ 487 (803)
.+|+++||++|++
T Consensus 462 ~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 462 QWWAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhC
Confidence 9999999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-111 Score=917.10 Aligned_cols=459 Identities=41% Similarity=0.708 Sum_probs=426.1
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCchhhhHHHHhhhcCceEEEeeCCh
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPP 80 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~ 80 (803)
+|+||||+|++..+..++ +...+..++|||+++|.+.+. ..+++|+||+|...++.+..........++...||.++.
T Consensus 17 ~ivvsnR~p~~~~~~~~~-~~~~~~~s~ggL~~~l~~~~~-~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 94 (486)
T COG0380 17 LIVVSNRLPVKKTPEGDK-GIEFGKRSAGGLVTALKPLLR-VDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAPVILSD 94 (486)
T ss_pred EEEEEccCCCcccccCCC-cceeeccCCcchhhhcchhhH-hhcceEEecCceeccccccchhhhhccccceEEEEecCH
Confidence 589999999998655544 578889999999999987554 689999999998765333233333334589999999999
Q ss_pred hhhhhhhhcccccccccccccCCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhh
Q 003682 81 ELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKR 160 (803)
Q Consensus 81 ~~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~ 160 (803)
+++++||+||||++|||+|||+.+. ..|++.+|++|++||++||++|++.+++ ||+||||||||+|||+|||++
T Consensus 95 ~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~-gDiIWVhDYhL~L~P~mlR~~ 168 (486)
T COG0380 95 EDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEP-GDIIWVHDYHLLLVPQMLRER 168 (486)
T ss_pred HHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEechhhhhHHHHHHh
Confidence 9999999999999999999999876 5789999999999999999999999998 599999999999999999999
Q ss_pred CCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEE---EcCeE
Q 003682 161 FNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLE---YFGRT 237 (803)
Q Consensus 161 ~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~---~~g~~ 237 (803)
.|+++||||||||||++|+|+|||+|++|++|||+||+||||+++|++||+.+|+++++..... .+. ++|+.
T Consensus 169 ~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~-----~~~~~~~~~~~ 243 (486)
T COG0380 169 IPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDA-----DIRFNGADGRI 243 (486)
T ss_pred CCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccccc-----cccccccCCce
Confidence 9999999999999999999999999999999999999999999999999999999999865211 233 34799
Q ss_pred EEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCC-CEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 003682 238 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKG-QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQI 316 (803)
Q Consensus 238 ~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~-~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i 316 (803)
+++.++|+|||+..|.....++.+..+..++++.+.+ +++|++|||+|++||++.+++||++||++||+++++++|+||
T Consensus 244 v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi 323 (486)
T COG0380 244 VKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQI 323 (486)
T ss_pred EEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEe
Confidence 9999999999999999999989888889999998866 999999999999999999999999999999999999999999
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeec
Q 003682 317 ANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQ 396 (803)
Q Consensus 317 ~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~ 396 (803)
+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+++.++++++.+||++||++++||+|||||||++||+|||.
T Consensus 324 ~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~ 403 (486)
T COG0380 324 APPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQR 403 (486)
T ss_pred cCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCcccccccCCCCCCCCCceEEecccccccccCCCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHH
Q 003682 397 GNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAY 476 (803)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~ 476 (803)
. ++|++|+|||+|++.+|.+|++|||||.+++|++|.+||+|+++||+.|++.+++.|.+||+++
T Consensus 404 ~---------------~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~ 468 (486)
T COG0380 404 D---------------KPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVAR 468 (486)
T ss_pred C---------------CCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHH
Confidence 4 4899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 003682 477 WARSFLQDLER 487 (803)
Q Consensus 477 W~~~~l~~l~~ 487 (803)
|+++|+++|..
T Consensus 469 W~~~fl~~la~ 479 (486)
T COG0380 469 WANSFLDDLAQ 479 (486)
T ss_pred HHHHHHHHHHh
Confidence 99999999987
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-106 Score=902.70 Aligned_cols=453 Identities=40% Similarity=0.712 Sum_probs=421.9
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCch-hhhHHHHhhhcCceEEEeeCC
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLS-EQDEVSQTLLETFKCVPAFIP 79 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv~~~ 79 (803)
|||||||+|+.+.++ + ++++.|||+++|.+.+. ..+++||||+|...+++ ++..+...+..+++|+||||+
T Consensus 2 livvsnr~p~~~~~~----~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 2 LIVVSNRLPVPITRG----G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred EEEEECCCCccccCC----C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 699999999987653 2 56788999999988665 57999999999765533 334454556778999999999
Q ss_pred hhhhhhhhhcccccccccccccCCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHh
Q 003682 80 PELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRK 159 (803)
Q Consensus 80 ~~~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~ 159 (803)
+++++.||+||||++|||+|||+++. ..|+++.|++|++||++||++|++.++| +|+||||||||++||++||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHHh
Confidence 99999999999999999999999765 5899999999999999999999999998 59999999999999999999
Q ss_pred hCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEE
Q 003682 160 RFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVS 239 (803)
Q Consensus 160 ~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~ 239 (803)
+.|+++||||||||||++|+|++||+|++|++|||+||+|||||++|++||+++|++++|.+.... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876543 3668899999
Q ss_pred EeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 003682 240 IKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANP 319 (803)
Q Consensus 240 v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~ 319 (803)
|.++|+|||++.|.+....+++.+....+|++++++++|++|||+++.||+..+|+||++|++++|+++++++|+|++.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999999888778888888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCc
Q 003682 320 ARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNE 399 (803)
Q Consensus 320 ~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~ 399 (803)
+|+++++|+++++++++++++||++||+.+|.|++++.+.++++++.++|++|||||+||++||||||++|||||+.|.
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~- 382 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPK- 382 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998763
Q ss_pred ccccccCCCCCCCCCceEEecccccccccCCCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHH
Q 003682 400 KLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 479 (803)
Q Consensus 400 ~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 479 (803)
.|+||+|+++|+++++.+|++|||+|++++|+||.++|+|+++||+.|++++++++.++|+.+|++
T Consensus 383 --------------~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 448 (456)
T TIGR02400 383 --------------DGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWRE 448 (456)
T ss_pred --------------CceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHH
Confidence 588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 003682 480 SFLQDLE 486 (803)
Q Consensus 480 ~~l~~l~ 486 (803)
+|+.+|.
T Consensus 449 ~~l~~l~ 455 (456)
T TIGR02400 449 DFLSDLN 455 (456)
T ss_pred HHHHHhh
Confidence 9999875
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-96 Score=834.81 Aligned_cols=458 Identities=47% Similarity=0.809 Sum_probs=426.5
Q ss_pred CEEEEccCccceEeCCCCCCCeEEEeCCCccHHhhhhccCCCCceEEEeecCCcCCchhhhHHHHhhhcCceEEEeeCCh
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPP 80 (803)
Q Consensus 1 liivs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~ 80 (803)
|||||||+|+.++++++ |.|.++++.|||+++|.+.+. ..+++||||++...+.++...+......+|+|+|||+++
T Consensus 2 li~vsnr~p~~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 2 LVVVSNRLPVSIERDGD--GEFEARRSAGGLATALKGLLK-RTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred EEEEECCCCceeEEcCC--CceEeccCCCcHHHHHHHHHh-cCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 69999999999998875 599999999999999987555 579999999998766544434455567899999999999
Q ss_pred hhhhhhhhcccccccccccccCCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhh
Q 003682 81 ELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKR 160 (803)
Q Consensus 81 ~~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~ 160 (803)
++++.||+||||++|||+|||+++. .+|++++|++|++||++||++|++.++| +|+||||||||+++|.+||++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999876 5799999999999999999999999997 599999999999999999999
Q ss_pred CCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEE
Q 003682 161 FNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 240 (803)
Q Consensus 161 ~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v 240 (803)
.++++||||+|||||++++|+++|+|++|+++||+||+||||+++|+++|+++|+++++++..... .+.++|+.+++
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~---~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDG---GVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCc---eEEECCEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999998866532 58899999999
Q ss_pred eEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 003682 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPA 320 (803)
Q Consensus 241 ~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~ 320 (803)
.++|+|||++.|.+...+++..+..++++..++++++|++|||+++.||+..+|+||+++++++|+++++++|+|+|.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999998777666666666777777889999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcc
Q 003682 321 RGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEK 400 (803)
Q Consensus 321 ~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~ 400 (803)
++++++++++++++++++++||.++|+.+|.+++++.+.++.+++.++|++||+||+||.+||||||++|||||+.|
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p--- 386 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD--- 386 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred cccccCCCCCCCCCceEEecccccccccCCCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHH
Q 003682 401 LDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 480 (803)
Q Consensus 401 ~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~ 480 (803)
++|+||+|+++|++++..+|++|||+|++++|++|.++|+|++++|+.+++++++++.++++..|+++
T Consensus 387 ------------~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~ 454 (460)
T cd03788 387 ------------DPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANS 454 (460)
T ss_pred ------------CCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 37899999999999998889999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 003682 481 FLQDL 485 (803)
Q Consensus 481 ~l~~l 485 (803)
|+++|
T Consensus 455 ~l~~l 459 (460)
T cd03788 455 FLDDL 459 (460)
T ss_pred HHHhh
Confidence 99887
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=356.73 Aligned_cols=564 Identities=13% Similarity=0.110 Sum_probs=334.2
Q ss_pred HHhHHHHHHHHHHHHHHHHh-------hc------CCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhh
Q 003682 115 RSLWQAYVSVNKIFADKVME-------VI------SPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR 181 (803)
Q Consensus 115 ~~~w~~Y~~vN~~fa~~i~~-------~~------~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~ 181 (803)
++.|..-.+++..+.+.+.+ .+ .| |+|+-|+++--.++..|++.. ++|..++.|.. ..+-++
T Consensus 275 e~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~p--DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~ 349 (1050)
T TIGR02468 275 EELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWP--YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLE 349 (1050)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCC--CEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhh
Confidence 34577777777766665542 11 24 999999888777888877765 68899999942 111111
Q ss_pred -----------------cCCCcHHH-HHHHhcCCEEeccCHhhHHHHHHHHH-------HHhCceecccCceeeEEEcCe
Q 003682 182 -----------------TLPIRDEL-LRALLNADLIGFHTFDYARHFLSCCS-------RMLGVSYQSKRGYIGLEYFGR 236 (803)
Q Consensus 182 -----------------~lp~~~~i-l~~ll~~dligf~~~~~~~~Fl~~~~-------~~l~~~~~~~~~~~~~~~~g~ 236 (803)
.++.|-+. -..+-.||.|--.|......-..... |.|... ..+ ++..+|+
T Consensus 350 ~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~--~~~---gv~~~g~ 424 (1050)
T TIGR02468 350 QLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRAR--ARR---GVSCYGR 424 (1050)
T ss_pred hhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhh--hcc---ccccccc
Confidence 01112111 12466788888777666553222110 111000 001 1222222
Q ss_pred -EEEEeEecccCChhHHHHHhCCchHH-------------HHHHHHHHHh--CCCEEEEeecCcccccCHHHHHHHHHHH
Q 003682 237 -TVSIKILPVGIHIGQLQSVLNLPETE-------------AKVAELQDQF--KGQIVMLGVDDMDIFKGISLKLLAMEQL 300 (803)
Q Consensus 237 -~~~v~v~p~Gid~~~f~~~~~~~~~~-------------~~~~~l~~~~--~~~~iil~V~Rld~~Kgi~~~l~A~~~l 300 (803)
..++.|+|+|||++.|.+........ .....++..+ +++++|++|||+++.||+..+|+||..+
T Consensus 425 ~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L 504 (1050)
T TIGR02468 425 FMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGEC 504 (1050)
T ss_pred CCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHh
Confidence 22788999999999998642211100 0112333333 6788999999999999999999999988
Q ss_pred HHhCCCCCCcEEEEEEecCCCCCchhH----HHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhc----
Q 003682 301 LSQNPSKRGKIVLVQIANPARGRGRDV----QEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIA---- 372 (803)
Q Consensus 301 l~~~p~~~~~v~lv~i~~~~~~~~~~~----~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~A---- 372 (803)
.+..+.. ++.+ ++|... +.+.. .....++.+++.+ .+....+.|.|.+++++++++|+.|
T Consensus 505 ~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~~li~~-------lgL~g~V~FlG~v~~edvp~lYr~Ad~s~ 572 (1050)
T TIGR02468 505 RPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVLKLIDK-------YDLYGQVAYPKHHKQSDVPDIYRLAAKTK 572 (1050)
T ss_pred HhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHHHHHHH-------hCCCCeEEecCCCCHHHHHHHHHHhhhcC
Confidence 6543321 3333 345321 11111 1233445555555 3344567788899999999999998
Q ss_pred ccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHH
Q 003682 373 ECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDS 449 (803)
Q Consensus 373 dv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~ 449 (803)
|+||+||++||||++++||||| |.|||+|+.+|..+.+. +|++|+|.|++++|++|.+
T Consensus 573 DVFV~PS~~EgFGLvlLEAMAc-------------------GlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~ 633 (1050)
T TIGR02468 573 GVFINPAFIEPFGLTLIEAAAH-------------------GLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLK 633 (1050)
T ss_pred CeeeCCcccCCCCHHHHHHHHh-------------------CCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHH
Confidence 6999999999999999999999 67899999999998883 5999999999999999999
Q ss_pred HhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHHHhhccccccc-----------cCcC--------cceeEee
Q 003682 450 ALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHMRRRCWG-----------IGFG--------LGFRVVA 510 (803)
Q Consensus 450 aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~~~~~~~~~~~-----------~~~~--------~~~~~~~ 510 (803)
+|.. ++.+....+..++.+..+++...++++++.+......+..-.... .+.+ +++.+..
T Consensus 634 LL~D-pelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 712 (1050)
T TIGR02468 634 LVAD-KQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDG 712 (1050)
T ss_pred HhhC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccccccCccccccccccchhhccccc
Confidence 9984 444555566666777889999999999988887654331000000 0100 0000000
Q ss_pred c----C--ccc-cCCCH----HHHHHHHH-------------------------hcCCeEEE--EecCCcCCCCCCCCCC
Q 003682 511 L----D--PNF-RKLSI----DHIVSAYK-------------------------RTKNRAIL--LDYDGTIMVPGSISTS 552 (803)
Q Consensus 511 ~----~--~~~-~~l~~----~~~~~~y~-------------------------~~~~kli~--~DlDGTLl~~~~~~~~ 552 (803)
- . .+. ..++. ..+..+.+ ....++|+ +|+|+| .. .
T Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~----~-- 785 (1050)
T TIGR02468 713 DKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPKGSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD----L-- 785 (1050)
T ss_pred cccccccccccccccchhhHHHHHHHHHhhccccccccccccccccccccCccccccceEEEEEeccCCC-CC----h--
Confidence 0 0 000 00010 01111111 11246666 999999 32 1
Q ss_pred CCHHHHHHHHHHh---cCCCCeEEEEcCCChhhHHHHhhcC--C---CCcEEecCcEEEEeCCc-----eeEEee---cC
Q 003682 553 PNAEAVAILDNLC---RDPKNVVFLVSGKDRDTLAEWFSSC--E---GLGIAAEHGYFVRPNYG-----VDWETC---VS 616 (803)
Q Consensus 553 is~~~~~aL~~L~---~~~g~~v~IaTGR~~~~l~~~~~~l--~---~l~lia~nGa~i~~~~~-----~~~~~~---~~ 616 (803)
.+.+.+.++.+. ....+.++++|||+..++.+.+... + ..-+||.-|..|+++.. ..|..- ..
T Consensus 786 -~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~ 864 (1050)
T TIGR02468 786 -LQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHS 864 (1050)
T ss_pred -HHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHH
Confidence 233333333331 2345899999999999999988653 3 23478999999888621 112110 00
Q ss_pred CCCccH-HHHHHHHHHHHhhc--------CCCceEeecc----ceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCe-E
Q 003682 617 VPDFSW-KQIAEPVMKLYTET--------TDGSTIETKE----SALVWNFQYADPDFGSCQAKELLDHLESVLANEPV-S 682 (803)
Q Consensus 617 ~~~~~~-~~~~~~i~~~y~~~--------~~g~~ie~k~----~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~-~ 682 (803)
..+..| .+.+++.+..+... .++...+... +++++... ++... ...+++.+.|... .... .
T Consensus 865 hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~--d~~~~-~~v~elr~~Lr~~--gLr~~~ 939 (1050)
T TIGR02468 865 HIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVK--DPSKV-PPVKELRKLLRIQ--GLRCHA 939 (1050)
T ss_pred HHHccCCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceEEEEec--CcccC-ccHHHHHHHHHhC--CCceEE
Confidence 011234 22233333333221 1222333222 23333222 22211 1234455555422 2122 2
Q ss_pred EEE-CCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEE-EeCChh-hHH-HHHHc
Q 003682 683 VKS-GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLC-IGDDRS-DED-MFEVI 736 (803)
Q Consensus 683 v~~-g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla-~GD~~N-Di~-Mf~~a 736 (803)
+.+ +..+++|.|..+|||.||++|+.++ |++++++++ +||+.| |.+ |+...
T Consensus 940 iys~~~~~LDVlP~~ASKgqAlRyL~~rw---gi~l~~v~VfaGdSGntD~e~Ll~G~ 994 (1050)
T TIGR02468 940 VYCRNGTRLNVIPLLASRSQALRYLFVRW---GIELANMAVFVGESGDTDYEGLLGGL 994 (1050)
T ss_pred EeecCCcEeeeeeCCCCHHHHHHHHHHHc---CCChHHeEEEeccCCCCCHHHHhCCc
Confidence 333 4589999999999999999999999 999999955 999999 955 55433
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-30 Score=275.05 Aligned_cols=234 Identities=20% Similarity=0.236 Sum_probs=185.7
Q ss_pred CeEEEEecCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCce
Q 003682 532 NRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGV 609 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~ 609 (803)
.++|++||||||++.. +.+..++++++++|++|++++|+.|+|+|||+...+.++++.+ .+.++++||++++..++.
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~ 92 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDINGK 92 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCCC
Confidence 5899999999999842 2356889999999999955689999999999999999999765 467899999999876544
Q ss_pred eEEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEEEECCeE
Q 003682 610 DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNI 689 (803)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~ 689 (803)
.+... ...++.+.+...++.+..++||+++|.++..+.+||+.++.. .....++.+.+.+.+. ...+.+++.+
T Consensus 93 ~~~~~---l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~i~~~~~--~~~~~~g~~~ 165 (266)
T PRK10187 93 THIVH---LPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQRITQIWP--QLALQPGKCV 165 (266)
T ss_pred eeecc---CChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHHHHhhCC--ceEEeCCCEE
Confidence 33222 233444555555666778899999999999999999866321 1112223333332222 3667789999
Q ss_pred EEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeCC
Q 003682 690 VEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDD 769 (803)
Q Consensus 690 vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~~ 769 (803)
+||+|+++|||.|++++++++ |+..+++++|||+.||++||+.+... ..++|+||++.+.|+|++++
T Consensus 166 lEi~p~g~~Kg~al~~ll~~~---~~~~~~v~~~GD~~nD~~mf~~~~~~----------~g~~vavg~a~~~A~~~l~~ 232 (266)
T PRK10187 166 VEIKPRGTNKGEAIAAFMQEA---PFAGRTPVFVGDDLTDEAGFAVVNRL----------GGISVKVGTGATQASWRLAG 232 (266)
T ss_pred EEeeCCCCCHHHHHHHHHHhc---CCCCCeEEEEcCCccHHHHHHHHHhc----------CCeEEEECCCCCcCeEeCCC
Confidence 999999999999999999999 99999999999999999999999431 12789999999999999999
Q ss_pred HhHHHHHHHHHHHhhcc
Q 003682 770 TAEILRMLLGLAEASAQ 786 (803)
Q Consensus 770 ~~ev~~~L~~l~~~~~~ 786 (803)
+++|..+|+.|+....+
T Consensus 233 ~~~v~~~L~~l~~~~~~ 249 (266)
T PRK10187 233 VPDVWSWLEMITTAQQQ 249 (266)
T ss_pred HHHHHHHHHHHHHhhhc
Confidence 99999999999986663
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5e-31 Score=270.82 Aligned_cols=248 Identities=31% Similarity=0.513 Sum_probs=211.5
Q ss_pred HHHHHHHHHhcCCeEEEEecCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEe
Q 003682 520 IDHIVSAYKRTKNRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAA 597 (803)
Q Consensus 520 ~~~~~~~y~~~~~kli~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia 597 (803)
.....+.|...++++|++||||||.+.. +....++++++++|++|+.+.++.|+|+|||+...++.+++ ++++++++
T Consensus 6 ~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~a 84 (266)
T COG1877 6 SNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLIA 84 (266)
T ss_pred hhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEEE
Confidence 3445566788899999999999999854 34567889999999999999999999999999999999997 78999999
Q ss_pred cCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhc
Q 003682 598 EHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLA 677 (803)
Q Consensus 598 ~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~ 677 (803)
+||++++...+..|..........|++.+.+++++|.+++||+++|.|+..+.|||++++++....++....... .
T Consensus 85 ehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~----~ 160 (266)
T COG1877 85 EHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATL----I 160 (266)
T ss_pred ecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhc----c
Confidence 999999888777788776666778999999999999999999999999999999999997764433332222221 1
Q ss_pred CCC-eEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEe
Q 003682 678 NEP-VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTV 756 (803)
Q Consensus 678 ~~~-~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~v 756 (803)
+.. +.+..|+..||++|.++|||.+++++++.+ ....+++++.||+.+|++||++++.+ +.++|.+
T Consensus 161 ~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~---~~~~~~~~~aGDD~TDE~~F~~v~~~----------~~~~v~v 227 (266)
T COG1877 161 NELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL---PFDGRFPIFAGDDLTDEDAFAAVNKL----------DSITVKV 227 (266)
T ss_pred ccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC---CCCCCcceecCCCCccHHHHHhhccC----------CCceEEe
Confidence 222 789999999999999999999999999987 44446899999999999999999874 2378999
Q ss_pred CCCCccceeEeCCHhHHHHHHHHHHHhhc
Q 003682 757 GQKPSKAKYYLDDTAEILRMLLGLAEASA 785 (803)
Q Consensus 757 G~~~s~A~~~v~~~~ev~~~L~~l~~~~~ 785 (803)
|...+.|++.+.........|.++.....
T Consensus 228 ~~~~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 228 GVGSTQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred cCCcccccccccccHHHHHHHHHHHHHhh
Confidence 99999999999999999999999988776
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=268.96 Aligned_cols=237 Identities=29% Similarity=0.415 Sum_probs=192.5
Q ss_pred cCCeEEEEecCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCC
Q 003682 530 TKNRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNY 607 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~ 607 (803)
+++++|+|||||||++.. +....++++++++|++|++++++.|+|+|||+...+...+ .+++++++++||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEeecCEEEecCC
Confidence 357899999999999843 3446688999999999999999999999999988877655 3467899999999998644
Q ss_pred ce-eEEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccC-CCccchhhHHHHHHHHHHHhcCCCeEEEE
Q 003682 608 GV-DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYA-DPDFGSCQAKELLDHLESVLANEPVSVKS 685 (803)
Q Consensus 608 ~~-~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~-d~~~~~~~~~el~~~l~~~l~~~~~~v~~ 685 (803)
.. .|... ......|++.+.++.+++.++ ||+++|.|+.+++|||+.+ +++.+..++.++...+. ...++.+..
T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNL-TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeec-hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 33 35432 222246888888888888877 9999999999999999998 67766666666665543 334678889
Q ss_pred CCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEe--CCCCccc
Q 003682 686 GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTV--GQKPSKA 763 (803)
Q Consensus 686 g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~v--G~~~s~A 763 (803)
++.++|++|.++|||.+++++++++ ++.++++++|||+.||++||+.+... + .....++|.| |..++.|
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~---~~~~~~~i~iGD~~~D~~~~~~~~~~-~-----~~~g~~~v~v~~g~~~~~A 225 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQ---PGSGISPVYLGDDITDEDAFRVVNNQ-W-----GNYGFYPVPIGSGSKKTVA 225 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhc---ccCCCceEEEcCCCcHHHHHHHHhcc-c-----CCCCeEEEEEecCCcCCCc
Confidence 9999999999999999999999999 88889999999999999999999321 0 0012367777 8888999
Q ss_pred eeEeCCHhHHHHHHHHHH
Q 003682 764 KYYLDDTAEILRMLLGLA 781 (803)
Q Consensus 764 ~~~v~~~~ev~~~L~~l~ 781 (803)
+|+++++++|.++|+.|+
T Consensus 226 ~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 226 KFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred eEeCCCHHHHHHHHHHHh
Confidence 999999999999999875
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=270.03 Aligned_cols=243 Identities=25% Similarity=0.339 Sum_probs=190.6
Q ss_pred HhcCCeEEEEecCCcCCCCCC-CC-CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEe
Q 003682 528 KRTKNRAILLDYDGTIMVPGS-IS-TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRP 605 (803)
Q Consensus 528 ~~~~~kli~~DlDGTLl~~~~-~~-~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~ 605 (803)
.+.+..+||+||||||++..+ .+ ..++++++++|++|+ +++.|+|+|||++..+.++++ +.+++++++||+.+..
T Consensus 107 ~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La--~~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~hGa~i~~ 183 (366)
T PLN03017 107 SRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA--KCFPTAIVTGRCIDKVYNFVK-LAELYYAGSHGMDIKG 183 (366)
T ss_pred hcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh--cCCcEEEEeCCCHHHHHHhhc-ccCceEEEcCCcEEec
Confidence 345678999999999995432 23 379999999999995 579999999999999999864 4568899999999987
Q ss_pred CCceeEEe------ecCCCCccHHHHHHHH---HHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHh
Q 003682 606 NYGVDWET------CVSVPDFSWKQIAEPV---MKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVL 676 (803)
Q Consensus 606 ~~~~~~~~------~~~~~~~~~~~~~~~i---~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l 676 (803)
+++..+.. ........|.+.+.++ +..+++++||+++|.|.++++|||+++++. ...++...+...+
T Consensus 184 p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~----~~~~l~~~~~~vl 259 (366)
T PLN03017 184 PAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEK----KWSELVLQVRSVL 259 (366)
T ss_pred CCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHH----HHHHHHHHHHHHH
Confidence 65421110 1111223466655555 556778899999999999999999998664 2356666677667
Q ss_pred cCCC-eEEEECCeEEEEEeC-CCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEE
Q 003682 677 ANEP-VSVKSGPNIVEVKPQ-GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFAC 754 (803)
Q Consensus 677 ~~~~-~~v~~g~~~vEI~p~-gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v 754 (803)
.+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+...+.+++|||+.+|++||+.+... ...++|
T Consensus 260 ~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~---------~~G~gI 330 (366)
T PLN03017 260 KNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDR---------GEGFGI 330 (366)
T ss_pred HhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhc---------CCceEE
Confidence 6665 789999999999995 99999999999998822122245799999999999999999642 023899
Q ss_pred EeC--CCCccceeEeCCHhHHHHHHHHHHHhhcc
Q 003682 755 TVG--QKPSKAKYYLDDTAEILRMLLGLAEASAQ 786 (803)
Q Consensus 755 ~vG--~~~s~A~~~v~~~~ev~~~L~~l~~~~~~ 786 (803)
.|| .+++.|+|+++++++|.++|++|+.....
T Consensus 331 ~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~~ 364 (366)
T PLN03017 331 LVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQM 364 (366)
T ss_pred EECCCCCCCcceEeCCCHHHHHHHHHHHHHHHhh
Confidence 999 57899999999999999999999886543
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-31 Score=272.06 Aligned_cols=227 Identities=38% Similarity=0.663 Sum_probs=153.5
Q ss_pred EEecCCcCCCCCC--CCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCceeEEe
Q 003682 536 LLDYDGTIMVPGS--ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWET 613 (803)
Q Consensus 536 ~~DlDGTLl~~~~--~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~~~~~ 613 (803)
|+||||||.+..+ ....+++.++++|++||+++++.|+|+|||+...++.+ ..+++++++++||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~-~~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERF-GGIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH--S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHh-cCCCCceEEEEeeEEeccCccccccc
Confidence 6999999998542 44578899999999999999999999999999995444 46788999999999999999888876
Q ss_pred ecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCC-CeEEEECCeEEEE
Q 003682 614 CVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANE-PVSVKSGPNIVEV 692 (803)
Q Consensus 614 ~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~-~~~v~~g~~~vEI 692 (803)
.....+..|++.+.++++.+.+++||+++|.|++++.|||++++++++..++.++.+.+.+.+... ++.+..|+.++||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 545556689999999999999999999999999999999999999988888999999988877665 7899999999999
Q ss_pred EeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCC-----CCccceeEe
Q 003682 693 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-----KPSKAKYYL 767 (803)
Q Consensus 693 ~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~-----~~s~A~~~v 767 (803)
+|.+++||.|+++|++.+...+-.+++++++||+.+|++||++++... ...+++.||. ++|.|+|++
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~--------~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELE--------EGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS------------EEEEES---------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcc--------cCCCCeEEEeeccccccccccccc
Confidence 999999999999999987222223789999999999999999997631 1125666664 569999999
Q ss_pred CCHh
Q 003682 768 DDTA 771 (803)
Q Consensus 768 ~~~~ 771 (803)
+++.
T Consensus 232 ~~p~ 235 (235)
T PF02358_consen 232 DDPS 235 (235)
T ss_dssp ----
T ss_pred ccCC
Confidence 9873
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-29 Score=269.72 Aligned_cols=243 Identities=25% Similarity=0.371 Sum_probs=187.0
Q ss_pred HHHHhcCCeEEEEecCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEE
Q 003682 525 SAYKRTKNRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYF 602 (803)
Q Consensus 525 ~~y~~~~~kli~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~ 602 (803)
.+|.+.+.+++|+||||||.+.. |....++++++++|++|++. ..|+|+|||+...+.++++. ..++++++||+.
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 36788889999999999998754 35667899999999999665 47999999999999999964 578999999999
Q ss_pred EEeCCc----eeEEee------------cCCCCccHHHHHHHHHHH---HhhcCCCceEeeccceEEEeeccCCCccchh
Q 003682 603 VRPNYG----VDWETC------------VSVPDFSWKQIAEPVMKL---YTETTDGSTIETKESALVWNFQYADPDFGSC 663 (803)
Q Consensus 603 i~~~~~----~~~~~~------------~~~~~~~~~~~~~~i~~~---y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~ 663 (803)
++.+.+ ..|... ......+|.+.+.++.+. +++++||+++|.|.++++|||+++++++...
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~ 268 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPL 268 (384)
T ss_pred eecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHH
Confidence 876421 112211 011134566555555444 5667899999999999999999997765433
Q ss_pred hHHHHHHHHHHHhcCCC-eEEEECCeEEEEEe-CCCCHHHHHHHHHHHhhhCCCCcc-c--EEEEeCChhhHHHHHHcch
Q 003682 664 QAKELLDHLESVLANEP-VSVKSGPNIVEVKP-QGVNKGLVAQHQLETMHQKGMLPD-F--VLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 664 ~~~el~~~l~~~l~~~~-~~v~~g~~~vEI~p-~gv~Kg~al~~ll~~l~~~gi~~d-~--vla~GD~~NDi~Mf~~ag~ 738 (803)
++.++ .+.+.+.+ +.+..|+.++||+| .++|||.|++++++++ +++.+ + +++|||+.||++||+.+..
T Consensus 269 ~~~~l----~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~---g~~~~d~~~pi~iGDD~TDedmF~~L~~ 341 (384)
T PLN02580 269 VAQCV----HDVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESL---GLSNCDDVLPIYIGDDRTDEDAFKVLRE 341 (384)
T ss_pred HHHHH----HHHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhc---CCCcccceeEEEECCCchHHHHHHhhhc
Confidence 33333 33333444 78889999999999 5999999999999998 87754 3 4899999999999998753
Q ss_pred hcCCCCCCCCcceEEEEeC--CCCccceeEeCCHhHHHHHHHHHHHhhcc
Q 003682 739 AAAGPSLSPVAEVFACTVG--QKPSKAKYYLDDTAEILRMLLGLAEASAQ 786 (803)
Q Consensus 739 s~a~~~~~~~~~~~~v~vG--~~~s~A~~~v~~~~ev~~~L~~l~~~~~~ 786 (803)
.. ..++|.|| .+.+.|+|+++++++|.++|+.|+.....
T Consensus 342 ~~---------~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~~~ 382 (384)
T PLN02580 342 GN---------RGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWKKS 382 (384)
T ss_pred cC---------CceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhhhc
Confidence 10 01456665 47899999999999999999999886543
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.2e-29 Score=263.73 Aligned_cols=243 Identities=23% Similarity=0.374 Sum_probs=191.0
Q ss_pred HhcCCeEEEEecCCcCCCCC--CCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEe
Q 003682 528 KRTKNRAILLDYDGTIMVPG--SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRP 605 (803)
Q Consensus 528 ~~~~~kli~~DlDGTLl~~~--~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~ 605 (803)
.+.+..+||+||||||++.. +....++++++++|++|++ +..|+|+|||+...+.++++ +++++++++||+.++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK--CFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc--CCCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 34567899999999999643 2455789999999999964 57999999999999999996 4578999999999986
Q ss_pred CC-ceeEEe----ecCCCCccHHHHHHHHHHHH---hhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhc
Q 003682 606 NY-GVDWET----CVSVPDFSWKQIAEPVMKLY---TETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLA 677 (803)
Q Consensus 606 ~~-~~~~~~----~~~~~~~~~~~~~~~i~~~y---~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~ 677 (803)
++ +..|+. ........|.+.+.++++.+ +.++||+++|.|.++++|||+.++++ ...++.+.+.+.+.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 63 334531 11122446777777665554 47899999999999999999998664 23456666666666
Q ss_pred CCC-eEEEECCeEEEEEeC-CCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEE
Q 003682 678 NEP-VSVKSGPNIVEVKPQ-GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACT 755 (803)
Q Consensus 678 ~~~-~~v~~g~~~vEI~p~-gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~ 755 (803)
+.+ +.+..|+.++||+|. ++|||.|+++|++.+...+...++++++||+.+|++||+.+.... ..+++.
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~---------~G~gI~ 317 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKK---------QGLGIL 317 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcC---------CCccEE
Confidence 655 789999999999995 999999999999987222233457999999999999999986420 125677
Q ss_pred eC--CCCccceeEeCCHhHHHHHHHHHHHhhcc
Q 003682 756 VG--QKPSKAKYYLDDTAEILRMLLGLAEASAQ 786 (803)
Q Consensus 756 vG--~~~s~A~~~v~~~~ev~~~L~~l~~~~~~ 786 (803)
|| .+.|.|+|+++++++|.++|+.|+.....
T Consensus 318 Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~~ 350 (354)
T PLN02151 318 VSKYAKETNASYSLQEPDEVMEFLERLVEWKQL 350 (354)
T ss_pred eccCCCCCcceEeCCCHHHHHHHHHHHHHhhhc
Confidence 76 67899999999999999999999986544
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-27 Score=250.49 Aligned_cols=230 Identities=19% Similarity=0.210 Sum_probs=158.6
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCC-cEEecCcEEEEeCCc
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGL-GIAAEHGYFVRPNYG 608 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l-~lia~nGa~i~~~~~ 608 (803)
|++|+|++|+||||++ ++..++++++++|+++ +++|+.|+|+|||++..+.+++..+.-. +++++||++|...+.
T Consensus 1 ~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~-~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~ 76 (264)
T COG0561 1 MMIKLLAFDLDGTLLD---SNKTISPETKEALARL-REKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGE 76 (264)
T ss_pred CCeeEEEEcCCCCccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCc
Confidence 5789999999999999 7788999999999998 9999999999999999999999887433 699999999999855
Q ss_pred eeEEeecCCCCccHHHHHHHHHHHHhhc--CCCceEeeccceE------------EE-----eeccC---CC------cc
Q 003682 609 VDWETCVSVPDFSWKQIAEPVMKLYTET--TDGSTIETKESAL------------VW-----NFQYA---DP------DF 660 (803)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~i~~~y~~~--~~g~~ie~k~~~~------------~~-----~~~~~---d~------~~ 660 (803)
..+...++ .+.+..+++..... ....+........ .. ..... .. ..
T Consensus 77 ~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (264)
T COG0561 77 LLFQKPLS------REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDK 150 (264)
T ss_pred EEeeecCC------HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEec
Confidence 54443322 23344444333221 1111111100000 00 00000 00 00
Q ss_pred chhhHHHHHHHHHHHhcCCCeEEEECCe-EEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 661 GSCQAKELLDHLESVLANEPVSVKSGPN-IVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 661 ~~~~~~el~~~l~~~l~~~~~~v~~g~~-~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
......++.+.+.+.+......+.++.. ++||+|+|+|||.|++++++++ |+++++|+||||+.||++||+.+|++
T Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~l---gi~~~~v~afGD~~ND~~Ml~~ag~g 227 (264)
T COG0561 151 DHEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAGLG 227 (264)
T ss_pred ChHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHh---CCCHHHeEEeCCccccHHHHHhcCee
Confidence 0122334444555555544455555544 4999999999999999999999 99999999999999999999999987
Q ss_pred cCCCCCCCCcceEEEEeCCCCccceeEe--CCHhHHHHHHHHHHH
Q 003682 740 AAGPSLSPVAEVFACTVGQKPSKAKYYL--DDTAEILRMLLGLAE 782 (803)
Q Consensus 740 ~a~~~~~~~~~~~~v~vG~~~s~A~~~v--~~~~ev~~~L~~l~~ 782 (803)
+||+|+++. .+..|+++. ++.++|.+.|+++..
T Consensus 228 vam~Na~~~----------~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 228 VAMGNADEE----------LKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred eeccCCCHH----------HHhhCCcccCCccchHHHHHHHHHhc
Confidence 655554321 245577654 577999999998754
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-27 Score=251.51 Aligned_cols=229 Identities=18% Similarity=0.210 Sum_probs=153.6
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCC----CcEEecCcEEEEe
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG----LGIAAEHGYFVRP 605 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~----l~lia~nGa~i~~ 605 (803)
|++|+|++|+||||++ .++.++++++++|++| +++|+.|+|||||++..+.++++.+.- .++++.||+.|+.
T Consensus 1 m~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~ 76 (270)
T PRK10513 1 MAIKLIAIDMDGTLLL---PDHTISPAVKQAIAAA-RAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQK 76 (270)
T ss_pred CceEEEEEecCCcCcC---CCCccCHHHHHHHHHH-HHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEE
Confidence 4589999999999999 6788999999999998 999999999999999999998877631 2589999999986
Q ss_pred C--CceeEEeecCCCCccHHHHHHHHHHHHhhc--------CCCceEeeccce-----------EEEeec---cCCCc--
Q 003682 606 N--YGVDWETCVSVPDFSWKQIAEPVMKLYTET--------TDGSTIETKESA-----------LVWNFQ---YADPD-- 659 (803)
Q Consensus 606 ~--~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~--------~~g~~ie~k~~~-----------~~~~~~---~~d~~-- 659 (803)
. +...+...++. +.+..+++...+. ..+.+...+... ....+. ...+.
T Consensus 77 ~~~~~~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (270)
T PRK10513 77 AADGETVAQTALSY------DDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQ 150 (270)
T ss_pred CCCCCEEEecCCCH------HHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCC
Confidence 3 43444443332 1222222221110 011111111000 000000 00000
Q ss_pred c------c-hhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHH
Q 003682 660 F------G-SCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDM 732 (803)
Q Consensus 660 ~------~-~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~M 732 (803)
. . .....++.+.+.+.+......+.++..++||+|+|+|||+|++++++++ |++++++++|||+.||++|
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~---gi~~~~v~afGD~~NDi~M 227 (270)
T PRK10513 151 FPKVMMIDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHL---GIKPEEVMAIGDQENDIAM 227 (270)
T ss_pred ceEEEEeCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHH
Confidence 0 0 0112233333433333323345667789999999999999999999999 9999999999999999999
Q ss_pred HHHcchhcCCCCCCCCcceEEEEeCCCCccceeEe--CCHhHHHHHHHHHH
Q 003682 733 FEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYL--DDTAEILRMLLGLA 781 (803)
Q Consensus 733 f~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v--~~~~ev~~~L~~l~ 781 (803)
|+.+|+++||+|+++. .+..|+|++ ++.++|.++|+++.
T Consensus 228 l~~ag~~vAm~NA~~~----------vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 228 IEYAGVGVAMGNAIPS----------VKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHhCCceEEecCccHH----------HHHhcCeeccCCCcchHHHHHHHHh
Confidence 9999987555444331 246688887 46788999998875
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=252.39 Aligned_cols=229 Identities=15% Similarity=0.175 Sum_probs=154.3
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeC-Cc
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-YG 608 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~-~~ 608 (803)
|+|+|++||||||++ +++.++++++++|++| +++|+.|++||||++..+.+++..+. ..++++.||+.|++. +.
T Consensus 1 m~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~ 76 (272)
T PRK15126 1 MARLAAFDMDGTLLM---PDHHLGEKTLSTLARL-RERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGE 76 (272)
T ss_pred CccEEEEeCCCcCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCC
Confidence 479999999999999 7788999999999998 99999999999999999999987763 346799999999863 33
Q ss_pred eeEEeecCCCCccHHHHHHHHHHHHhhc--------CCCceEeeccc---------eEEEee---ccCC-Ccc-------
Q 003682 609 VDWETCVSVPDFSWKQIAEPVMKLYTET--------TDGSTIETKES---------ALVWNF---QYAD-PDF------- 660 (803)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~i~~~y~~~--------~~g~~ie~k~~---------~~~~~~---~~~d-~~~------- 660 (803)
..+...++. +.+.++++..... ..+.+...... ...... .... ...
T Consensus 77 ~l~~~~i~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~ 150 (272)
T PRK15126 77 LLHRQDLPA------DVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCG 150 (272)
T ss_pred EEEeecCCH------HHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEEC
Confidence 344433322 2233333222111 00111100000 000000 0000 000
Q ss_pred chhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhc
Q 003682 661 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAA 740 (803)
Q Consensus 661 ~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~ 740 (803)
......++.+.+.+.+......+.++..++||+|+++|||+|++++++++ |++++++++|||+.||++||+.+|.++
T Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag~~v 227 (272)
T PRK15126 151 DHDDLTRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHL---GLSLADCMAFGDAMNDREMLGSVGRGF 227 (272)
T ss_pred CHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHh---CCCHHHeEEecCCHHHHHHHHHcCCce
Confidence 01122334444544444333344566789999999999999999999999 999999999999999999999999876
Q ss_pred CCCCCCCCcceEEEEeCCCCcccee--Ee--CCHhHHHHHHHHHHH
Q 003682 741 AGPSLSPVAEVFACTVGQKPSKAKY--YL--DDTAEILRMLLGLAE 782 (803)
Q Consensus 741 a~~~~~~~~~~~~v~vG~~~s~A~~--~v--~~~~ev~~~L~~l~~ 782 (803)
||+|+.+. .+..|++ ++ ++.++|.++|+++..
T Consensus 228 Am~Na~~~----------vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 228 IMGNAMPQ----------LRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred eccCChHH----------HHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 66554432 2355655 44 467899999999874
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=250.22 Aligned_cols=228 Identities=13% Similarity=0.117 Sum_probs=152.4
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeC-Cc
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-YG 608 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~-~~ 608 (803)
|+|+|++|+||||++ +++.++++++++|+++ +++|+.|+|||||++..+.+++..+. ..++++.||+.|+.. +.
T Consensus 1 mikli~~DlDGTLl~---~~~~is~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 76 (266)
T PRK10976 1 MYQVVASDLDGTLLS---PDHTLSPYAKETLKLL-TARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGN 76 (266)
T ss_pred CceEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCC
Confidence 379999999999999 6788999999999998 99999999999999999999887763 345799999999864 33
Q ss_pred eeEEeecCCCCccHHHHHHHHHHHHhhcC---------CCceEeeccc-----------eEEEe-eccCCC-cc------
Q 003682 609 VDWETCVSVPDFSWKQIAEPVMKLYTETT---------DGSTIETKES-----------ALVWN-FQYADP-DF------ 660 (803)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~i~~~y~~~~---------~g~~ie~k~~-----------~~~~~-~~~~d~-~~------ 660 (803)
..+...++. +.+.++++...+.. .+.+...... ..... ...... ..
T Consensus 77 ~i~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~ 150 (266)
T PRK10976 77 LIFSHNLDR------DIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFT 150 (266)
T ss_pred EehhhcCCH------HHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEE
Confidence 333332221 23333333222110 0111110000 00000 000000 00
Q ss_pred --chhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 661 --GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 661 --~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
......++.+.+.+.+......+.++..++||+|+++|||+|++++++++ |+++++++||||+.||++||+.+|+
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~l---gi~~~~viafGD~~NDi~Ml~~ag~ 227 (266)
T PRK10976 151 CDSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKL---GYSLKDCIAFGDGMNDAEMLSMAGK 227 (266)
T ss_pred cCCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHc---CCCHHHeEEEcCCcccHHHHHHcCC
Confidence 00112233344444443322344567789999999999999999999999 9999999999999999999999999
Q ss_pred hcCCCCCCCCcceEEEEeCCCCccce--eEe--CCHhHHHHHHHHHH
Q 003682 739 AAAGPSLSPVAEVFACTVGQKPSKAK--YYL--DDTAEILRMLLGLA 781 (803)
Q Consensus 739 s~a~~~~~~~~~~~~v~vG~~~s~A~--~~v--~~~~ev~~~L~~l~ 781 (803)
++||+|+++.. +..|+ +++ ++.++|.++|+++.
T Consensus 228 ~vAm~NA~~~v----------K~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 228 GCIMGNAHQRL----------KDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred CeeecCCcHHH----------HHhCCCCeecccCchHHHHHHHHHHh
Confidence 86666654322 34554 554 57789999999875
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=237.71 Aligned_cols=236 Identities=17% Similarity=0.135 Sum_probs=152.4
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC--CCcEEecCcEEEEeCCc
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE--GLGIAAEHGYFVRPNYG 608 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~--~l~lia~nGa~i~~~~~ 608 (803)
.+++|++|+||||++ ++..+++.++++|++| +++|+.|++||||+...+.+++..+. ..++|++||+.|+.++.
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~ 81 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRL-REAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQ 81 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCc
Confidence 479999999999999 6777899999999998 99999999999999999999988763 24689999999987643
Q ss_pred e-------eEEeecCCCCccHHHHHHHHHHHHhhcCCCce-Eeeccc-----eEE-Ee-----eccCCC---ccchhhHH
Q 003682 609 V-------DWETCVSVPDFSWKQIAEPVMKLYTETTDGST-IETKES-----ALV-WN-----FQYADP---DFGSCQAK 666 (803)
Q Consensus 609 ~-------~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~-ie~k~~-----~~~-~~-----~~~~d~---~~~~~~~~ 666 (803)
. .+...++ .+.+..+++...+...-.+ ...... ... .. ...... .+......
T Consensus 82 ~~~~~~~~~~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (271)
T PRK03669 82 WQDHPDFPRIISGIS------HGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSD 155 (271)
T ss_pred ccCCCCceEeecCCC------HHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCH
Confidence 1 1111111 1223333332221100000 000000 000 00 000000 00000001
Q ss_pred HHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCC---CcccEEEEeCChhhHHHHHHcchhcCCC
Q 003682 667 ELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGM---LPDFVLCIGDDRSDEDMFEVIKSAAAGP 743 (803)
Q Consensus 667 el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi---~~d~vla~GD~~NDi~Mf~~ag~s~a~~ 743 (803)
+....+.+.+....+.+..+..++||+|+++|||+|++++++++ |+ ++++++||||+.||++||+.+|.++||+
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~l---gi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~ 232 (271)
T PRK03669 156 ERMAQFTARLAELGLQFVQGARFWHVLDASAGKDQAANWLIATY---QQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK 232 (271)
T ss_pred HHHHHHHHHHHHCCCEEEecCeeEEEecCCCCHHHHHHHHHHHH---HhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec
Confidence 11222333332223445556679999999999999999999999 99 9999999999999999999999887777
Q ss_pred CCCCCcceEEEEeCCCCccceeEeC--CHhHHHHHHHHHHHh
Q 003682 744 SLSPVAEVFACTVGQKPSKAKYYLD--DTAEILRMLLGLAEA 783 (803)
Q Consensus 744 ~~~~~~~~~~v~vG~~~s~A~~~v~--~~~ev~~~L~~l~~~ 783 (803)
|+.+... ..-+.+..|.|+++ +.+++.+.|+.+..+
T Consensus 233 ~~~~~~~----~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 233 GLNREGV----HLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred CCCCCCc----ccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 6442110 11123456888875 567999999988764
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=256.56 Aligned_cols=230 Identities=17% Similarity=0.210 Sum_probs=153.3
Q ss_pred hcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC---CC-------cEEec
Q 003682 529 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE---GL-------GIAAE 598 (803)
Q Consensus 529 ~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~---~l-------~lia~ 598 (803)
++++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||++..+.+++..+. .. +.|+.
T Consensus 305 ~~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl-~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~ 380 (580)
T PLN02887 305 KPKFSYIFCDMDGTLLN---SKSQISETNAKALKEA-LSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFL 380 (580)
T ss_pred ccCccEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEee
Confidence 56789999999999999 7888999999999998 99999999999999999998887652 11 35567
Q ss_pred CcEEEEeC-CceeEEeecCCCCccHHHHHHHHHHHHhhcC--------CCceEeeccceEE-Ee--ec--------cCC-
Q 003682 599 HGYFVRPN-YGVDWETCVSVPDFSWKQIAEPVMKLYTETT--------DGSTIETKESALV-WN--FQ--------YAD- 657 (803)
Q Consensus 599 nGa~i~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~--------~g~~ie~k~~~~~-~~--~~--------~~d- 657 (803)
||+.|++. +...+...++. +.+.++++...+.. .+.|......... .+ +. ...
T Consensus 381 NGA~I~d~~g~~I~~~~L~~------e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 454 (580)
T PLN02887 381 QGLLVYGRQGREIYRSNLDQ------EVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQ 454 (580)
T ss_pred cCeEEEECCCcEEEEEeCCH------HHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHH
Confidence 99999853 33344444332 23333333222110 0111100000000 00 00 000
Q ss_pred ----Ccc------ch--hhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeC
Q 003682 658 ----PDF------GS--CQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD 725 (803)
Q Consensus 658 ----~~~------~~--~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD 725 (803)
... .. ....++.+.+.+.+......+.++..++||+|+|+|||.|++++++++ |+++++|+||||
T Consensus 455 ~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~l---GI~~eeviAFGD 531 (580)
T PLN02887 455 LLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHL---GVSPDEIMAIGD 531 (580)
T ss_pred hhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHc---CCCHHHEEEEec
Confidence 000 00 001223333444443333445677889999999999999999999999 999999999999
Q ss_pred ChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEe--CCHhHHHHHHHHHH
Q 003682 726 DRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYL--DDTAEILRMLLGLA 781 (803)
Q Consensus 726 ~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v--~~~~ev~~~L~~l~ 781 (803)
+.||++||+.+|+++||+|+.+. .+..|+|++ ++.++|.++|++++
T Consensus 532 s~NDIeMLe~AG~gVAMgNA~ee----------VK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 532 GENDIEMLQLASLGVALSNGAEK----------TKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred chhhHHHHHHCCCEEEeCCCCHH----------HHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 99999999999986555554331 246688877 46789999998864
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=232.01 Aligned_cols=223 Identities=20% Similarity=0.189 Sum_probs=147.9
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeC--
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-- 606 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~-- 606 (803)
|++|+|++|+||||++ +++.++++++++|++| +++|+.|+|||||+...+.+++..++ ..+++++||+.++..
T Consensus 1 m~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~ 76 (230)
T PRK01158 1 MKIKAIAIDIDGTITD---KDRRLSLKAVEAIRKA-EKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFD 76 (230)
T ss_pred CceeEEEEecCCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCC
Confidence 4579999999999999 6778999999999998 89999999999999999998876663 346899999999876
Q ss_pred CceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceE-EEeeccCCCccchhhHHHHHHHHHHHhcCCCeEEEE
Q 003682 607 YGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESAL-VWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKS 685 (803)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~-~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~ 685 (803)
+...+...++ ...+.+....+.|... ...+....... ..... .... ....++.+.++. +. ..+.+..
T Consensus 77 ~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~l~~-~~-~~~~~~~ 144 (230)
T PRK01158 77 GKRIFLGDIE----ECEKAYSELKKRFPEA--STSLTKLDPDYRKTEVA-LRRT---VPVEEVRELLEE-LG-LDLEIVD 144 (230)
T ss_pred CCEEEEcchH----HHHHHHHHHHHhcccc--ceeeecCCcccccceee-eccc---ccHHHHHHHHHH-cC-CcEEEEe
Confidence 3333332221 1122222222222110 00000000000 00000 0000 011222223322 21 1244555
Q ss_pred CCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCcccee
Q 003682 686 GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKY 765 (803)
Q Consensus 686 g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~ 765 (803)
+..++|+.|+++|||.|++++++++ |++++++++|||+.||++||+.+|.++||+|+++. .+..|+|
T Consensus 145 ~~~~~ei~~~~~~Kg~al~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~----------vk~~a~~ 211 (230)
T PRK01158 145 SGFAIHIKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEE----------LKEAADY 211 (230)
T ss_pred cceEEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhcCceEEecCccHH----------HHHhcce
Confidence 5678999999999999999999999 99999999999999999999999986555543321 2356888
Q ss_pred Ee--CCHhHHHHHHHHHH
Q 003682 766 YL--DDTAEILRMLLGLA 781 (803)
Q Consensus 766 ~v--~~~~ev~~~L~~l~ 781 (803)
++ ++.++|.+.|+++.
T Consensus 212 v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 212 VTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred EecCCCcChHHHHHHHHh
Confidence 77 46788999998764
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-25 Score=245.79 Aligned_cols=301 Identities=17% Similarity=0.174 Sum_probs=207.0
Q ss_pred HHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHh
Q 003682 115 RSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL 194 (803)
Q Consensus 115 ~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll 194 (803)
...+..|...++.++.++....++ |+||+|+++.+.++...+. .+.|+.+++|.++..+. + .....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~--Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~--~--~~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDLDA--DVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN--R--RVWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccCCC--CEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc--H--HHHHHHHHHHH
Confidence 446788988888887765444455 9999999998777666543 36789999999885431 0 01122233344
Q ss_pred cCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh--
Q 003682 195 NADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-- 272 (803)
Q Consensus 195 ~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~-- 272 (803)
.+|.+.+.+.++++.++ ..+ ++ ++|+|||+........++ .....+++++
T Consensus 135 ~~d~~i~~~~~~~~~~~----------------------~~~--~~-vipngvd~~~~~~~~~~~---~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQV----------------------PPR--KV-IIPPSIDPLSGKNRELSP---ADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCCC----------------------CCc--eE-EeCCCCCCCccccCCCCH---HHHHHHHHHhCC
Confidence 57777665533221110 111 23 789999975422111111 2233445555
Q ss_pred -CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcc
Q 003682 273 -KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 351 (803)
Q Consensus 273 -~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~ 351 (803)
.++++|+++||+++.||+..+++|++.+.+++|+++ |+++|.++..+ ++..++.+++.+ +.+ ...
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~~-~~~~~~~~~~~~---~~~------~~~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATDD-PEGWIVYEEVLE---YAE------GDP 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCCC-chhHHHHHHHHH---HhC------CCC
Confidence 478899999999999999999999999988878765 88888654221 222333222222 211 011
Q ss_pred cEEEecCC-CCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC
Q 003682 352 PVVLIDTP-LQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS 430 (803)
Q Consensus 352 ~v~~~~~~-~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~ 430 (803)
.++++... ++.+++.++|++||+|++||.+||||++++||||| |.|+|+|+.+|..+.+.
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~-------------------G~Pvv~s~~~~~~~~i~ 313 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWK-------------------GKPVIAGPVGGIPLQIE 313 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHc-------------------CCCEEEcCCCCchhhcc
Confidence 25555433 48999999999999999999999999999999999 67899999999998883
Q ss_pred ---CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHHHHHHH
Q 003682 431 ---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLER 487 (803)
Q Consensus 431 ---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 487 (803)
+|+++++ .+++|++|.+++++ ++.+..+.+..++++ ..+++...++++++.+++
T Consensus 314 ~~~~g~~~~~--~~~~a~~i~~ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 314 DGETGFLVDT--VEEAAVRILYLLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred cCCceEEeCC--cHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 3778764 67889999999985 455666666677765 569999999998887654
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-24 Score=228.32 Aligned_cols=226 Identities=19% Similarity=0.234 Sum_probs=147.5
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeC-C
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-Y 607 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~-~ 607 (803)
|++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||++..+.+.+..+. ..++++.||+.|++. +
T Consensus 1 M~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~ 76 (272)
T PRK10530 1 MTYRVIALDLDGTLLT---PKKTILPESLEALARA-REAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQA 76 (272)
T ss_pred CCccEEEEeCCCceEC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCC
Confidence 4589999999999999 7788999999999998 99999999999999999999887763 346899999999864 2
Q ss_pred ce-eEEeecCCCCccHHHHHHHHHHHHhhcCC--------CceEeeccc----eEEE----------eeccCCC------
Q 003682 608 GV-DWETCVSVPDFSWKQIAEPVMKLYTETTD--------GSTIETKES----ALVW----------NFQYADP------ 658 (803)
Q Consensus 608 ~~-~~~~~~~~~~~~~~~~~~~i~~~y~~~~~--------g~~ie~k~~----~~~~----------~~~~~d~------ 658 (803)
+. .+...++. +.+.++++...+..- +.+...... ...+ .+...+.
T Consensus 77 ~~~l~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (272)
T PRK10530 77 KKVLEADPLPV------QQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAAR 150 (272)
T ss_pred CEEEEecCCCH------HHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHh
Confidence 32 33333221 223333332222100 001100000 0000 0000000
Q ss_pred ----ccc--h-----hhHHHHHHHHHHHhcCCCe-EEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCC
Q 003682 659 ----DFG--S-----CQAKELLDHLESVLANEPV-SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDD 726 (803)
Q Consensus 659 ----~~~--~-----~~~~el~~~l~~~l~~~~~-~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~ 726 (803)
... . ....++.+.+.+. ... ...++..++|++|++++||.|++++++++ |++++++++|||+
T Consensus 151 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~---gi~~~e~i~~GD~ 224 (272)
T PRK10530 151 QVNAIWKFALTHEDLPQLQHFAKHVEHE---LGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQ---GWSMKNVVAFGDN 224 (272)
T ss_pred hcCCcEEEEEecCCHHHHHHHHHHHhhh---cCceEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHeEEeCCC
Confidence 000 0 0112222222222 222 23445678999999999999999999999 9999999999999
Q ss_pred hhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEe--CCHhHHHHHHHHHH
Q 003682 727 RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYL--DDTAEILRMLLGLA 781 (803)
Q Consensus 727 ~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v--~~~~ev~~~L~~l~ 781 (803)
.||++||+.+|.+++|+|+++ ..+..|+|++ ++.++|.++|+++.
T Consensus 225 ~NDi~m~~~ag~~vamgna~~----------~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 225 FNDISMLEAAGLGVAMGNADD----------AVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred hhhHHHHHhcCceEEecCchH----------HHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 999999999997544333211 0235688877 46788999998874
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.5e-24 Score=246.64 Aligned_cols=319 Identities=13% Similarity=0.132 Sum_probs=214.6
Q ss_pred HHHHHHHHHHHHHHHHhh-cCCCCCeEEEeCccccchHHHHHhh-----CCCCeEEEEEecC-----CCChhhhhc-CC-
Q 003682 118 WQAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKR-----FNRVKLGFFLHSP-----FPSSEIYRT-LP- 184 (803)
Q Consensus 118 w~~Y~~vN~~fa~~i~~~-~~~~~d~iwihDyhl~llp~~lr~~-----~~~~~i~~flH~p-----fP~~~~~~~-lp- 184 (803)
..-|.-+.++.++.+.+. .+| |+|++||+|-.++|.++.+. +.++++.|++|-- ||...+..+ +|
T Consensus 590 ~~RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~ 667 (977)
T PLN02939 590 FKRFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDV 667 (977)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCH
Confidence 344555566666655443 456 99999999999985554432 3567899999943 222111111 12
Q ss_pred --------------CcHHHH-HHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCCh
Q 003682 185 --------------IRDELL-RALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHI 249 (803)
Q Consensus 185 --------------~~~~il-~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~ 249 (803)
.+-.++ .|+..||.|-.-++.|++.-+. ..--|++. ....+..++.++|+|||+
T Consensus 668 ~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID~ 736 (977)
T PLN02939 668 HQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGIDT 736 (977)
T ss_pred HHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEecceeh
Confidence 111223 3677789888888888877554 11001110 112344577889999999
Q ss_pred hHHHHHhCC-------ch----HHHHHHHHHHHhC------CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEE
Q 003682 250 GQLQSVLNL-------PE----TEAKVAELQDQFK------GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIV 312 (803)
Q Consensus 250 ~~f~~~~~~-------~~----~~~~~~~l~~~~~------~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~ 312 (803)
+.|.+.... .. .......++++++ +.++|++|||+.+.||+..+++|+.++++ ++ +.
T Consensus 737 e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d----vq 810 (977)
T PLN02939 737 DTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG----GQ 810 (977)
T ss_pred hhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----CE
Confidence 998753210 00 0111344666662 35899999999999999999999998875 23 44
Q ss_pred EEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeee
Q 003682 313 LVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYI 392 (803)
Q Consensus 313 lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~ 392 (803)
|+++|.+ ++ ..+++++..++.+.+. .+.+.|.+.++......+|+.||+||+||.+||||++.+|||
T Consensus 811 LVIvGdG-----p~-~~~e~eL~~La~~l~l-------~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAM 877 (977)
T PLN02939 811 FVLLGSS-----PV-PHIQREFEGIADQFQS-------NNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAM 877 (977)
T ss_pred EEEEeCC-----Cc-HHHHHHHHHHHHHcCC-------CCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHH
Confidence 8888843 21 1345555666555321 233455567777777899999999999999999999999999
Q ss_pred eeecCCcccccccCCCCCCCCCceEEecccccccccCC------------CCceeCCCCHHHHHHHHHHHhC---CCHHH
Q 003682 393 ICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS------------GAIRVNPWNIDAVAEAMDSALG---VSDAE 457 (803)
Q Consensus 393 a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~------------~~~lvnP~d~~~~a~ai~~aL~---~~~~e 457 (803)
+| |.|+|++..+|..+.+. +|++|+|.|+++++++|.+++. .+++.
T Consensus 878 Ay-------------------GtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~ 938 (977)
T PLN02939 878 RY-------------------GSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEV 938 (977)
T ss_pred HC-------------------CCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHH
Confidence 99 67899999999988762 4899999999999999999886 24444
Q ss_pred HHHHHHHhhcccccCCHHHHHHHHHHHHHHHH
Q 003682 458 KQMRHEKHYRYVSTHDVAYWARSFLQDLERAC 489 (803)
Q Consensus 458 r~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 489 (803)
+....++. ....+++...++++++...++.
T Consensus 939 ~~~L~~~a--m~~dFSWe~~A~qYeeLY~~ll 968 (977)
T PLN02939 939 WKQLVQKD--MNIDFSWDSSASQYEELYQRAV 968 (977)
T ss_pred HHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 44433322 2356899999999887666654
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.8e-24 Score=222.29 Aligned_cols=216 Identities=18% Similarity=0.305 Sum_probs=151.5
Q ss_pred EEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeC-CceeEE
Q 003682 535 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPN-YGVDWE 612 (803)
Q Consensus 535 i~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~-~~~~~~ 612 (803)
|++|+||||++ ++..++++++++|++| +++|+.+++||||++..+.+++..++ ..++|+.||+++... +...+.
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKEL-QEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHH-HHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhh-cccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 7788999999999998 88999999999999999999998764 358999999999443 333444
Q ss_pred eecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEE-------------------Eeec--c--CCCc-------cch
Q 003682 613 TCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALV-------------------WNFQ--Y--ADPD-------FGS 662 (803)
Q Consensus 613 ~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~-------------------~~~~--~--~d~~-------~~~ 662 (803)
..++ .+.+..+++......-...+...+.... .... . .... ...
T Consensus 77 ~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~ 150 (254)
T PF08282_consen 77 KPID------SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDP 150 (254)
T ss_dssp ESB-------HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCH
T ss_pred hhee------ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccc
Confidence 3332 2333444443333211111111000000 0000 0 0000 012
Q ss_pred hhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCC
Q 003682 663 CQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAG 742 (803)
Q Consensus 663 ~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~ 742 (803)
.....+.+.+.+.+.+....+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||+.+|.+
T Consensus 151 ~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~---~i~~~~~~~~GD~~ND~~Ml~~~~~~--- 224 (254)
T PF08282_consen 151 EDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYL---GISPEDIIAFGDSENDIEMLELAGYS--- 224 (254)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHH---TTSGGGEEEEESSGGGHHHHHHSSEE---
T ss_pred hhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhc---ccccceeEEeecccccHhHHhhcCeE---
Confidence 345566677777776554677788999999999999999999999999 99999999999999999999999975
Q ss_pred CCCCCCcceEEEEeCCC----CccceeEeCC--HhHHHHHH
Q 003682 743 PSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRML 777 (803)
Q Consensus 743 ~~~~~~~~~~~v~vG~~----~s~A~~~v~~--~~ev~~~L 777 (803)
|+||++ +..|++++.+ .++|++.|
T Consensus 225 -----------~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 225 -----------VAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp -----------EEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred -----------EEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 455553 4678888742 36777664
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=250.22 Aligned_cols=308 Identities=14% Similarity=0.119 Sum_probs=214.7
Q ss_pred hHHHHHHHHHHHHHHHHhh-cCCCCCeEEEeCccccchHHHHHhh-----CCCCeEEEEEecCCCChhhhhcCCCcHHHH
Q 003682 117 LWQAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKR-----FNRVKLGFFLHSPFPSSEIYRTLPIRDELL 190 (803)
Q Consensus 117 ~w~~Y~~vN~~fa~~i~~~-~~~~~d~iwihDyhl~llp~~lr~~-----~~~~~i~~flH~pfP~~~~~~~lp~~~~il 190 (803)
...-|..+++..++.+.+. .+| |+|++||+|-.++|.++++. .+++|+.+++|-. + | ....+-
T Consensus 688 d~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl----~-~----~~n~lk 756 (1036)
T PLN02316 688 DGERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNL----E-F----GANHIG 756 (1036)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCc----c-c----chhHHH
Confidence 3445556666666655432 355 99999999999999999874 3568999999932 1 1 112244
Q ss_pred HHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhC-------Cch---
Q 003682 191 RALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLN-------LPE--- 260 (803)
Q Consensus 191 ~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~-------~~~--- 260 (803)
.++..+|.|---++.|++..... +. + ..+..++.++|+|||++.|.+... +.+
T Consensus 757 ~~l~~AD~ViTVS~tya~EI~~~-----~~----------l--~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~ 819 (1036)
T PLN02316 757 KAMAYADKATTVSPTYSREVSGN-----SA----------I--APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVV 819 (1036)
T ss_pred HHHHHCCEEEeCCHHHHHHHHhc-----cC----------c--ccccCCEEEEECCccccccCCcccccccccCCchhhh
Confidence 56778999988888887665531 00 0 112346778999999998764311 000
Q ss_pred --HHHHHHHHHHHhC----CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHH
Q 003682 261 --TEAKVAELQDQFK----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSET 334 (803)
Q Consensus 261 --~~~~~~~l~~~~~----~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v 334 (803)
.......++++++ +.++|++||||.+.||+..+++|+.++++. + +.||++|.+ ++ ..++.++
T Consensus 820 ~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~G-----pd-~~~e~~l 887 (1036)
T PLN02316 820 EGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGSA-----PD-PRIQNDF 887 (1036)
T ss_pred hhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeCC-----CC-HHHHHHH
Confidence 0112334666662 578999999999999999999999998863 2 347777743 22 2356667
Q ss_pred HHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCC
Q 003682 335 HATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKS 414 (803)
Q Consensus 335 ~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~ 414 (803)
.+++.++...+. ..+.|.+..+......+|++||+||+||.+|||||+.+|||+| |
T Consensus 888 ~~La~~Lg~~~~-----~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~-------------------G 943 (1036)
T PLN02316 888 VNLANQLHSSHH-----DRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRY-------------------G 943 (1036)
T ss_pred HHHHHHhCccCC-----CeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHc-------------------C
Confidence 777776553332 2233444455444458999999999999999999999999999 6
Q ss_pred ceEEecccccccccC-C---------------CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCCHHHH
Q 003682 415 SMLVVSEFVGCSPSL-S---------------GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYW 477 (803)
Q Consensus 415 g~vV~S~~~G~~~~l-~---------------~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W 477 (803)
.|+|++..+|..+.+ + +|++|+|.|+++++++|.++|......+....+..++.+ ..+++..-
T Consensus 944 tppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~ 1023 (1036)
T PLN02316 944 SIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRP 1023 (1036)
T ss_pred CCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHH
Confidence 689999999999987 2 389999999999999999999864333333233333333 45899999
Q ss_pred HHHHHHHHHHH
Q 003682 478 ARSFLQDLERA 488 (803)
Q Consensus 478 ~~~~l~~l~~~ 488 (803)
++++++...++
T Consensus 1024 A~~Y~~LY~~a 1034 (1036)
T PLN02316 1024 ALDYMELYHSA 1034 (1036)
T ss_pred HHHHHHHHHHH
Confidence 98888766654
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-23 Score=232.72 Aligned_cols=269 Identities=18% Similarity=0.268 Sum_probs=197.0
Q ss_pred CCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhC
Q 003682 140 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLG 219 (803)
Q Consensus 140 ~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~ 219 (803)
.|+|++|+.. .+...++++.|++++.+.+|-.|.. +.++ .++.+-..+. +.+.++.. ..
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~~-~~~~-------------~~~~ii~~S~-~~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFEP-ELLD-------------KNAKIIVPSQ-FLKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccCh-hHhc-------------cCCEEEEcCH-HHHHHHHh---hC-
Confidence 4999999733 4456677888999999999976532 2211 3566666554 44444321 11
Q ss_pred ceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCcccccCHHHHHHH
Q 003682 220 VSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGISLKLLA 296 (803)
Q Consensus 220 ~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~~Kgi~~~l~A 296 (803)
...++.++|+|+|.+.|.+. .. ..+++.+ .++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~-----~~---~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSN-----PQ---PNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCc-----ch---HHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 01245778999998877531 11 1233333 367899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccce
Q 003682 297 MEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCL 376 (803)
Q Consensus 297 ~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v 376 (803)
+.++.+++|+++ |+++|.+......+..++.+++.+++.+++. .+.+.|.++.+++..+|+.||+||
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~---------~v~~~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD---------RCIMLGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC---------cEEEeCCCCHHHHHHHHHhCCEEE
Confidence 999999998765 9989866533222334566667666655431 235677899999999999999999
Q ss_pred eccc-ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCc-eeCCCCHHHHHHHHHHHh
Q 003682 377 VTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAI-RVNPWNIDAVAEAMDSAL 451 (803)
Q Consensus 377 ~~S~-~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~-lvnP~d~~~~a~ai~~aL 451 (803)
+||. .||||++++||||| |.|+|+|..+|..+.+. .|+ +++|.|++++|++|.+++
T Consensus 282 ~pS~~~E~f~~~~lEAma~-------------------G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll 342 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAA-------------------GKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL 342 (380)
T ss_pred eCCCCccccccHHHHHHHc-------------------CCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH
Confidence 9997 49999999999999 67899999999988873 366 678999999999999999
Q ss_pred CCCHHHHHHHHHHhhcc-cccCCHHHHHHHHHHHHHH
Q 003682 452 GVSDAEKQMRHEKHYRY-VSTHDVAYWARSFLQDLER 487 (803)
Q Consensus 452 ~~~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~~ 487 (803)
+++.. ..+.+..+++ ..++++...++++++.++.
T Consensus 343 ~d~~~--~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 343 ADPEL--TQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred cCHHH--HHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 87643 3445555554 4668999999999888865
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-24 Score=218.03 Aligned_cols=196 Identities=26% Similarity=0.326 Sum_probs=147.0
Q ss_pred EEEEecCCcCCCCCCCC-CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCceeEE
Q 003682 534 AILLDYDGTIMVPGSIS-TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWE 612 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~-~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~~~~ 612 (803)
+|++|+||||++ .+ ..++++++++|++| ++.|+.|+++|||+...+..+++.+ +.+++++||+.++.+++..|.
T Consensus 1 li~~D~DgTL~~---~~~~~~~~~~~~~l~~l-~~~g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLD---PNAHELSPETIEALERL-REAGVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEE
Confidence 589999999998 45 68999999999999 7778999999999999999999775 578999999999987776666
Q ss_pred eecCCCC-ccHH---HHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhc-CCCeEEE-EC
Q 003682 613 TCVSVPD-FSWK---QIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLA-NEPVSVK-SG 686 (803)
Q Consensus 613 ~~~~~~~-~~~~---~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~-~~~~~v~-~g 686 (803)
. +... ..+. +.+...+..+....++...+.+...+.+++.... .......++.+.+..... ...+.+. ++
T Consensus 76 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 151 (204)
T TIGR01484 76 E--PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAE--LGQELDSKMRERLEKIGRNDLELEAIYVG 151 (204)
T ss_pred c--ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccc--hhhHHHHHHHHHHHhhccccCcEEEEEec
Confidence 4 1111 1121 1122233344445667777778888888887541 111122333444433321 1335565 69
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcC
Q 003682 687 PNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 741 (803)
Q Consensus 687 ~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a 741 (803)
..++||+|++++|+.+++++++++ +++++++++|||+.||++||+.++.++|
T Consensus 152 ~~~~ev~p~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 152 KTDLEVLPAGVDKGSALQALLKEL---NGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred CCEEEEecCCCChHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 999999999999999999999999 9999999999999999999999998644
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-23 Score=239.78 Aligned_cols=315 Identities=17% Similarity=0.157 Sum_probs=197.7
Q ss_pred hHHHHHHHHHHHHHHHHhhc-CCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChh--hhh------------
Q 003682 117 LWQAYVSVNKIFADKVMEVI-SPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE--IYR------------ 181 (803)
Q Consensus 117 ~w~~Y~~vN~~fa~~i~~~~-~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~--~~~------------ 181 (803)
.|.....+...+.+.+.+.. +| |+|++|+++..++..++++.. +.|+.++.|....... +..
T Consensus 93 ~~~~~~~~~~~l~~~~~~~~~~~--DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~ 169 (439)
T TIGR02472 93 LWPYLDELADNLLQHLRQQGHLP--DLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQY 169 (439)
T ss_pred hhhhHHHHHHHHHHHHHHcCCCC--CEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhc
Confidence 34444555555555454332 45 999999987666666666544 5789999996432211 000
Q ss_pred cCCCcHH-HHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCch
Q 003682 182 TLPIRDE-LLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPE 260 (803)
Q Consensus 182 ~lp~~~~-il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~ 260 (803)
.+..+-. ....+-.+|.|-..+...++.-+. .. ..-...++.++|+|||++.|.+....+.
T Consensus 170 ~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~---~~---------------~~~~~~ki~vIpnGvd~~~f~~~~~~~~ 231 (439)
T TIGR02472 170 NISRRIEAEEETLAHASLVITSTHQEIEEQYA---LY---------------DSYQPERMQVIPPGVDLSRFYPPQSSEE 231 (439)
T ss_pred chHHHHHHHHHHHHhCCEEEECCHHHHHHHHH---hc---------------cCCCccceEEECCCcChhhcCCCCcccc
Confidence 0000000 011233455444333322111110 00 0112346788999999999875322111
Q ss_pred HHHHHHHHHHHh---CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHH----HHHHH
Q 003682 261 TEAKVAELQDQF---KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQ----EVQSE 333 (803)
Q Consensus 261 ~~~~~~~l~~~~---~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~----~l~~~ 333 (803)
.. ..+..+..+ +++++|++|||+++.||+..+|+||+++.+..+.. ++++ ++|.+. +.+.++ ++.++
T Consensus 232 ~~-~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~--~~~~l~~~~~~~~~~ 305 (439)
T TIGR02472 232 TS-EIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRD--DIRKMESQQREVLQK 305 (439)
T ss_pred ch-hHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCcc--ccccccHHHHHHHHH
Confidence 11 122222222 46789999999999999999999998642211111 2322 344321 111111 22233
Q ss_pred HHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhc----ccceecccccCCCCCceeeeeeecCCcccccccCCCC
Q 003682 334 THATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIA----ECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDP 409 (803)
Q Consensus 334 v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~A----dv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~ 409 (803)
+..++.+ .+....+.|.|.++.+++.++|+.| |+||+||.+||||++++|||||
T Consensus 306 ~~~~~~~-------~~l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~--------------- 363 (439)
T TIGR02472 306 VLLLIDR-------YDLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAAC--------------- 363 (439)
T ss_pred HHHHHHH-------cCCCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHh---------------
Confidence 3444444 3344556788889999999999988 9999999999999999999999
Q ss_pred CCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHHHHH
Q 003682 410 STAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDL 485 (803)
Q Consensus 410 ~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l 485 (803)
|.|+|+|+.+|+.+.+. +|++|+|.|++++|++|.++++. ++++....+..++++ ..+++..-++++++-|
T Consensus 364 ----G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 364 ----GLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSD-SSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred ----CCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 67899999999998883 48999999999999999999984 455566666666665 4589888888887654
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-23 Score=238.73 Aligned_cols=297 Identities=20% Similarity=0.208 Sum_probs=193.5
Q ss_pred CCCCCeEEEeCccccchHHHHHhhC----CCCeEEEEEecCCCC----hhhhhcC--CC-------------cHHHHHHH
Q 003682 137 SPDDDFVWVHDYHLMVLPTFLRKRF----NRVKLGFFLHSPFPS----SEIYRTL--PI-------------RDELLRAL 193 (803)
Q Consensus 137 ~~~~d~iwihDyhl~llp~~lr~~~----~~~~i~~flH~pfP~----~~~~~~l--p~-------------~~~il~~l 193 (803)
+| |+|++||+|--++|.++++.. .+.|+.++.|..-.. .+.+..+ |. ..-+..++
T Consensus 118 ~p--DiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (466)
T PRK00654 118 RP--DIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGL 195 (466)
T ss_pred CC--ceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHH
Confidence 45 999999999999999998653 468999999965210 1111111 10 01112244
Q ss_pred hcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCC-------c----hHH
Q 003682 194 LNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNL-------P----ETE 262 (803)
Q Consensus 194 l~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~-------~----~~~ 262 (803)
..+|.|--.++.+.+..... ..| .|. .-.+..+..++.++|+|||.+.|.+.... + ...
T Consensus 196 ~~ad~vitvS~~~~~ei~~~---~~~------~gl-~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~ 265 (466)
T PRK00654 196 YYADRVTTVSPTYAREITTP---EFG------YGL-EGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKA 265 (466)
T ss_pred HhcCcCeeeCHHHHHHhccc---cCC------cCh-HHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchH
Confidence 55555555455444332210 000 000 00001123468899999999988653210 0 011
Q ss_pred HHHHHHHHHhC----CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHH
Q 003682 263 AKVAELQDQFK----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATV 338 (803)
Q Consensus 263 ~~~~~l~~~~~----~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv 338 (803)
...+.++++++ +.++|++|||+++.||+..+++|+++++++ + +.|+++|.+. + .+.+++++++
T Consensus 266 ~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~g~----~---~~~~~l~~l~ 332 (466)
T PRK00654 266 ENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGTGD----P---ELEEAFRALA 332 (466)
T ss_pred HHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEecCc----H---HHHHHHHHHH
Confidence 12334566652 568999999999999999999999998764 2 4488777432 1 2445555555
Q ss_pred HHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEE
Q 003682 339 RRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLV 418 (803)
Q Consensus 339 ~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV 418 (803)
.+.+. .++++.+. +.+....+|+.||+||+||.+||||++.+|||+| |.|+|
T Consensus 333 ~~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~-------------------G~p~V 384 (466)
T PRK00654 333 ARYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY-------------------GTLPI 384 (466)
T ss_pred HHCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHC-------------------CCCEE
Confidence 54321 24455554 5666789999999999999999999999999999 67899
Q ss_pred ecccccccccC-C--------CCceeCCCCHHHHHHHHHHHhCC--CHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHH
Q 003682 419 VSEFVGCSPSL-S--------GAIRVNPWNIDAVAEAMDSALGV--SDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLER 487 (803)
Q Consensus 419 ~S~~~G~~~~l-~--------~~~lvnP~d~~~~a~ai~~aL~~--~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 487 (803)
+|+.+|..+.+ + +|++|+|.|+++++++|.+++.. .++.+....++.. ...+++..-++++++...+
T Consensus 385 ~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~ 462 (466)
T PRK00654 385 VRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRR 462 (466)
T ss_pred EeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHH
Confidence 99999999988 2 38999999999999999999863 2233333333222 2568888888888776655
Q ss_pred H
Q 003682 488 A 488 (803)
Q Consensus 488 ~ 488 (803)
+
T Consensus 463 ~ 463 (466)
T PRK00654 463 L 463 (466)
T ss_pred H
Confidence 4
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=221.82 Aligned_cols=220 Identities=19% Similarity=0.257 Sum_probs=143.7
Q ss_pred EEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeCC-ceeE
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNY-GVDW 611 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~~-~~~~ 611 (803)
+|++||||||++ .++.++++++++|++| ++.|+.|++||||++..+.+.+..+. ..++++.||+.|...+ ...+
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~ 76 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKL-REKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILY 76 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEe
Confidence 589999999999 6778999999999998 88899999999999999999988764 3478999999998764 3344
Q ss_pred EeecCCCCccHHHHHHHHHHHHhhcC--------CCceEeeccce-EEEe----ec------cC----CCcc-------c
Q 003682 612 ETCVSVPDFSWKQIAEPVMKLYTETT--------DGSTIETKESA-LVWN----FQ------YA----DPDF-------G 661 (803)
Q Consensus 612 ~~~~~~~~~~~~~~~~~i~~~y~~~~--------~g~~ie~k~~~-~~~~----~~------~~----d~~~-------~ 661 (803)
...++. +.+.++++.+.+.. .+.++...... +... +. .. .... .
T Consensus 77 ~~~i~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR00099 77 KKPLDL------DLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLD 150 (256)
T ss_pred ecCCCH------HHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECC
Confidence 433332 23333333332211 11111110000 0000 00 00 0000 0
Q ss_pred hhhHHHHHHHHHH-HhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhc
Q 003682 662 SCQAKELLDHLES-VLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAA 740 (803)
Q Consensus 662 ~~~~~el~~~l~~-~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~ 740 (803)
.....++.+.+.+ .+......+.++..++||+|+++|||.|++++++++ |++++++++|||+.||++||+.+|.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~---~~~~~~~~~~GD~~nD~~m~~~~~~~~ 227 (256)
T TIGR00099 151 PEDLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGMNDIEMLEAAGYGV 227 (256)
T ss_pred HHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHc---CCCHHHEEEeCCcHHhHHHHHhCCcee
Confidence 0112233333331 222222345677889999999999999999999999 999999999999999999999999865
Q ss_pred CCCCCCCCcceEEEEeCCCCccceeEeC--CHhHHHHH
Q 003682 741 AGPSLSPVAEVFACTVGQKPSKAKYYLD--DTAEILRM 776 (803)
Q Consensus 741 a~~~~~~~~~~~~v~vG~~~s~A~~~v~--~~~ev~~~ 776 (803)
+|+|+++. .+..|+|++. +.++|.++
T Consensus 228 a~~na~~~----------~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 228 AMGNADEE----------LKALADYVTDSNNEDGVALA 255 (256)
T ss_pred EecCchHH----------HHHhCCEEecCCCCcchhhh
Confidence 44432211 2356788764 45667654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4e-23 Score=236.38 Aligned_cols=319 Identities=14% Similarity=0.143 Sum_probs=211.8
Q ss_pred HhHHHHHHHHHHHHHHHHhh-cCCCCCeEEEeCccccchHHHHHhhC------CCCeEEEEEecCC-----CChhhhhcC
Q 003682 116 SLWQAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKRF------NRVKLGFFLHSPF-----PSSEIYRTL 183 (803)
Q Consensus 116 ~~w~~Y~~vN~~fa~~i~~~-~~~~~d~iwihDyhl~llp~~lr~~~------~~~~i~~flH~pf-----P~~~~~~~l 183 (803)
+...-|.-.++..++.+.+. ++| |+|++||+|-.++|.+++++. .++|+.++.|... |....-..+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 34556777777777766542 456 999999999999999998753 4789999999642 211111112
Q ss_pred CCc------------HHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhH
Q 003682 184 PIR------------DELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQ 251 (803)
Q Consensus 184 p~~------------~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~ 251 (803)
|.. .-+-.++..||.|---++.|++.-.+....-.|++ +. ...+..++.++|+|||++.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~-----~~----l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLD-----KV----LEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChH-----HH----HHhcCCCeeEEeCCccccc
Confidence 211 11223566677776666666654332000000110 00 0113457788999999998
Q ss_pred HHHHhCCc--------h---HHHHHHHHHHHh-----CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003682 252 LQSVLNLP--------E---TEAKVAELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 315 (803)
Q Consensus 252 f~~~~~~~--------~---~~~~~~~l~~~~-----~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~ 315 (803)
|.+..... . .......+++.+ +++++|++|||+.+.||+..+++|++++++. + +.|++
T Consensus 268 ~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvi 341 (489)
T PRK14098 268 WNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVI 341 (489)
T ss_pred cCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEE
Confidence 87532110 0 001122344444 2568999999999999999999999998753 3 45888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeee
Q 003682 316 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 395 (803)
Q Consensus 316 i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~ 395 (803)
+|.+ +. .+++++++++.+.. ..+.+.+.++.+++..+|+.||+||+||..||||++.+|||+|
T Consensus 342 vG~G-----~~--~~~~~l~~l~~~~~---------~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~- 404 (489)
T PRK14098 342 CGSG-----DK--EYEKRFQDFAEEHP---------EQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSY- 404 (489)
T ss_pred EeCC-----CH--HHHHHHHHHHHHCC---------CCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhC-
Confidence 8842 21 24455555555421 1234556788999999999999999999999999999999999
Q ss_pred cCCcccccccCCCCCCCCCceEEecccccccccCC-------CCceeCCCCHHHHHHHHHHHhCC--CHHHHHHHHHHhh
Q 003682 396 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-------GAIRVNPWNIDAVAEAMDSALGV--SDAEKQMRHEKHY 466 (803)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~-------~~~lvnP~d~~~~a~ai~~aL~~--~~~er~~r~~~~~ 466 (803)
|.|+|++..+|..+.+. +|++|+|.|+++++++|.+++.+ .++.+....++.
T Consensus 405 ------------------G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~- 465 (489)
T PRK14098 405 ------------------GTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA- 465 (489)
T ss_pred ------------------CCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH-
Confidence 66899999999988772 48999999999999999998742 233322222222
Q ss_pred cccccCCHHHHHHHHHHHHHHH
Q 003682 467 RYVSTHDVAYWARSFLQDLERA 488 (803)
Q Consensus 467 ~~v~~~~~~~W~~~~l~~l~~~ 488 (803)
....+++..-++++++-.+++
T Consensus 466 -~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 466 -MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred -hcCCCChHHHHHHHHHHHHHH
Confidence 235688888888887766553
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=216.82 Aligned_cols=214 Identities=21% Similarity=0.189 Sum_probs=141.1
Q ss_pred EEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeCCc--eeE
Q 003682 535 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYG--VDW 611 (803)
Q Consensus 535 i~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~~~--~~~ 611 (803)
|++|+||||++ ++..++++++++|++| +++|+.|++||||++..+.+++..+. ..+++++||+.|+..+. ..|
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 76 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKA-ESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIF 76 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEE
Confidence 68999999999 6788999999999998 99999999999999999998887764 45789999999988653 344
Q ss_pred EeecCCCCccHHHHH-HHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEEEECCeEE
Q 003682 612 ETCVSVPDFSWKQIA-EPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIV 690 (803)
Q Consensus 612 ~~~~~~~~~~~~~~~-~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~v 690 (803)
...++ ..|.... ......+.. ....+. . ...........+ .....++. +.+.. ...+.++..++
T Consensus 77 ~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~----~~~~~~~~----~~~~~-~~~~~~~~~~~ 141 (225)
T TIGR01482 77 LAYLE---EEWFLDIVIAKTFPFSR-LKVQYP-R-RASLVKMRYGID----VDTVREII----KELGL-NLVAVDSGFDI 141 (225)
T ss_pred ecccC---HHHHHHHHHhcccchhh-hccccc-c-ccceEEEeecCC----HHHHHHHH----HhcCc-eEEEecCCcEE
Confidence 43322 1222111 111000000 000000 0 000000000001 11122222 22221 12233566799
Q ss_pred EEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeC--
Q 003682 691 EVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLD-- 768 (803)
Q Consensus 691 EI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~-- 768 (803)
||+|++++||.|++++++++ |++++++++|||+.||++||+.+|.++||+|+.+. .+..|+|++.
T Consensus 142 ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~----------~k~~A~~vt~~~ 208 (225)
T TIGR01482 142 HILPQGVNKGVAVKKLKEKL---GIKPGETLVCGDSENDIDLFEVPGFGVAVANAQPE----------LKEWADYVTESP 208 (225)
T ss_pred EEeeCCCCHHHHHHHHHHHh---CCCHHHEEEECCCHhhHHHHHhcCceEEcCChhHH----------HHHhcCeecCCC
Confidence 99999999999999999999 99999999999999999999999986555443321 2466888764
Q ss_pred CHhH----HHHHHHHH
Q 003682 769 DTAE----ILRMLLGL 780 (803)
Q Consensus 769 ~~~e----v~~~L~~l 780 (803)
+.++ |.+.|+++
T Consensus 209 ~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 209 YGEGGAEAIGEILQAI 224 (225)
T ss_pred CCCcHHHHHHHHHHhh
Confidence 5567 88887764
|
catalyze the same reaction as SPP. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.9e-23 Score=211.94 Aligned_cols=211 Identities=18% Similarity=0.198 Sum_probs=139.4
Q ss_pred CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCC-CcEEecCcEEEEeCCcee
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG-LGIAAEHGYFVRPNYGVD 610 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~-l~lia~nGa~i~~~~~~~ 610 (803)
+|+|++|+||||++ .++.+++.+.++|++| +++|+.|++||||++..+.+++..++. .+++++||++|+..+...
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKA-EKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 48999999999998 7788999999999999 889999999999999999998877643 368999999999865432
Q ss_pred EEeecCCCCccHH-HHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEEEECCeE
Q 003682 611 WETCVSVPDFSWK-QIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNI 689 (803)
Q Consensus 611 ~~~~~~~~~~~~~-~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~ 689 (803)
.. ... ...+. ...... .+....-.. ........+.. . . .....+.+.+ ......+..+..+
T Consensus 77 ~~--~~~-~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~--~-~----~~~~~~~~~l----~~~~~~~~~~~~~ 138 (215)
T TIGR01487 77 FL--ANM-EEEWFLDEEKKK--RFPRDRLSN--EYPRASLVIMR--E-G----KDVDEVREII----KERGLNLVDSGFA 138 (215)
T ss_pred EE--ecc-cchhhHHHhhhh--hhhhhhccc--ccceeEEEEec--C-C----ccHHHHHHHH----HhCCeEEEecCce
Confidence 11 111 11111 100000 010000000 00000011110 0 0 0112222233 2233444555678
Q ss_pred EEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeC-
Q 003682 690 VEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLD- 768 (803)
Q Consensus 690 vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~- 768 (803)
+||+|.+++||.+++++++++ |++++++++|||+.||++||+.+|.+++|+|+.+. .+..|+|++.
T Consensus 139 ~ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~----------~k~~A~~v~~~ 205 (215)
T TIGR01487 139 IHIMKKGVDKGVGVEKLKELL---GIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQ----------LKEIADYVTSN 205 (215)
T ss_pred EEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHH----------HHHhCCEEcCC
Confidence 999999999999999999999 99999999999999999999999986555443221 2456788774
Q ss_pred -CHhHHHHHH
Q 003682 769 -DTAEILRML 777 (803)
Q Consensus 769 -~~~ev~~~L 777 (803)
+.++|.++|
T Consensus 206 ~~~~Gv~~~l 215 (215)
T TIGR01487 206 PYGEGVVEVL 215 (215)
T ss_pred CCCchhhhhC
Confidence 556666543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.7e-23 Score=232.97 Aligned_cols=297 Identities=19% Similarity=0.190 Sum_probs=190.2
Q ss_pred cCCCCCeEEEeCccccchHHHHHhh-CCCCeEEEEEecC-----CCChhhhhc--CCCc-------------HHHHHHHh
Q 003682 136 ISPDDDFVWVHDYHLMVLPTFLRKR-FNRVKLGFFLHSP-----FPSSEIYRT--LPIR-------------DELLRALL 194 (803)
Q Consensus 136 ~~~~~d~iwihDyhl~llp~~lr~~-~~~~~i~~flH~p-----fP~~~~~~~--lp~~-------------~~il~~ll 194 (803)
++| |+|++||+|-.++|.+++.. ..++|+.++.|-. ||. ..+.. +|.. .-+-.++.
T Consensus 132 ~~p--DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVP--DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCC--CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 566 99999999999999999753 3467899999953 221 11111 1110 01223344
Q ss_pred cCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCc-------h----HHH
Q 003682 195 NADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLP-------E----TEA 263 (803)
Q Consensus 195 ~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~-------~----~~~ 263 (803)
.+|.|---++.+++...+... -.|++ + ....+..++.++|+|||++.|.+..... + ...
T Consensus 209 ~ad~vitVS~~~a~ei~~~~~-g~gl~-----~----~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~ 278 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPEA-GMGLD-----G----LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAA 278 (485)
T ss_pred hcCeeeecChhHHHHHhcccC-CcChH-----H----HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHH
Confidence 455544444444433221000 00000 0 0011234788999999999987532110 0 001
Q ss_pred HHHHHHHHhC-----CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHH
Q 003682 264 KVAELQDQFK-----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATV 338 (803)
Q Consensus 264 ~~~~l~~~~~-----~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv 338 (803)
....++++++ +.++|++|||+++.||+..+++|+++++++ + +.|+++|.+. + ++++++++++
T Consensus 279 ~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~G~----~---~~~~~l~~l~ 345 (485)
T PRK14099 279 NKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGSGD----A---ELEARFRAAA 345 (485)
T ss_pred hHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEecCC----H---HHHHHHHHHH
Confidence 1234555552 357888999999999999999999998753 2 4488887421 1 2444555554
Q ss_pred HHHhcccCCCCcccEEEecCCCCHHHHHHHH-HhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceE
Q 003682 339 RRINKIFGRPGYQPVVLIDTPLQFYERIAYY-VIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSML 417 (803)
Q Consensus 339 ~~in~~~~~~~~~~v~~~~~~~~~~~l~aly-~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~v 417 (803)
.+. + ..++++.|. .+++..+| +.||+||+||.+||||++.+|||+| |+|+
T Consensus 346 ~~~----~----~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~-------------------G~pp 396 (485)
T PRK14099 346 QAY----P----GQIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRY-------------------GAVP 396 (485)
T ss_pred HHC----C----CCEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHC-------------------CCCc
Confidence 432 1 124456665 67888877 5699999999999999999999999 5678
Q ss_pred EecccccccccC-C-----------CCceeCCCCHHHHHHHHHHHhC--CCHHHHHHHHHHhhcccccCCHHHHHHHHHH
Q 003682 418 VVSEFVGCSPSL-S-----------GAIRVNPWNIDAVAEAMDSALG--VSDAEKQMRHEKHYRYVSTHDVAYWARSFLQ 483 (803)
Q Consensus 418 V~S~~~G~~~~l-~-----------~~~lvnP~d~~~~a~ai~~aL~--~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 483 (803)
|+|..+|..+.+ + +|++|+|.|+++++++|.+++. .+++.+....++.+ ...+++..-++++++
T Consensus 397 Vvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~ 474 (485)
T PRK14099 397 VVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAA 474 (485)
T ss_pred EEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHH
Confidence 889999998877 2 4899999999999999998532 23444433333332 356898988988887
Q ss_pred HHHHHH
Q 003682 484 DLERAC 489 (803)
Q Consensus 484 ~l~~~~ 489 (803)
..+++.
T Consensus 475 lY~~l~ 480 (485)
T PRK14099 475 LYRSLV 480 (485)
T ss_pred HHHHHH
Confidence 766654
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.7e-23 Score=229.31 Aligned_cols=271 Identities=16% Similarity=0.122 Sum_probs=196.6
Q ss_pred CeEEEeCccccchHHHHHhh-CCCCeEEEEEecCCCChhhhhc--CC-CcHHHHHHHhcCCEEeccCHhhHHHHHHHHHH
Q 003682 141 DFVWVHDYHLMVLPTFLRKR-FNRVKLGFFLHSPFPSSEIYRT--LP-IRDELLRALLNADLIGFHTFDYARHFLSCCSR 216 (803)
Q Consensus 141 d~iwihDyhl~llp~~lr~~-~~~~~i~~flH~pfP~~~~~~~--lp-~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~ 216 (803)
|+|+.|..+.-.+..++++. ....++.+++|-+ +++.. .. .+..+-..+-.+|.+-..+....+.+..
T Consensus 120 diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~----d~~~~~~~~~~~~~~~~~~~~ad~vv~~S~~~~~~l~~---- 191 (406)
T PRK15427 120 DVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGI----DISSREVLNHYTPEYQQLFRRGDLMLPISDLWAGRLQK---- 191 (406)
T ss_pred CEEEEcCChHHHHHHHHHHhCCCCCCeEEEEccc----ccccchhhhhhhHHHHHHHHhCCEEEECCHHHHHHHHH----
Confidence 99999987766667777663 2244667788843 22211 01 1112223344688877666543333321
Q ss_pred HhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHH
Q 003682 217 MLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLA 296 (803)
Q Consensus 217 ~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A 296 (803)
.|. ...++.++|+|||++.|..... ....+...|++|||+.+.||+..+++|
T Consensus 192 -~g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a 243 (406)
T PRK15427 192 -MGC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEA 243 (406)
T ss_pred -cCC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHH
Confidence 121 1235677999999998853110 011345679999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccce
Q 003682 297 MEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCL 376 (803)
Q Consensus 297 ~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v 376 (803)
++.+.+++|+++ |+++|. ++..++++ +++.+ .+..+.+.|.|.++++++..+|+.||+||
T Consensus 244 ~~~l~~~~~~~~----l~ivG~-----G~~~~~l~----~~~~~-------~~l~~~V~~~G~~~~~el~~~l~~aDv~v 303 (406)
T PRK15427 244 CRQLKEQGVAFR----YRILGI-----GPWERRLR----TLIEQ-------YQLEDVVEMPGFKPSHEVKAMLDDADVFL 303 (406)
T ss_pred HHHHHhhCCCEE----EEEEEC-----chhHHHHH----HHHHH-------cCCCCeEEEeCCCCHHHHHHHHHhCCEEE
Confidence 999988887655 888883 34333444 44444 33445778889999999999999999999
Q ss_pred ecccc------cCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHH
Q 003682 377 VTAVR------DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAM 447 (803)
Q Consensus 377 ~~S~~------EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai 447 (803)
+||.. ||||++++||||| |.|||+|+.+|+.+.+. +|++|+|.|++++|++|
T Consensus 304 ~pS~~~~~g~~Eg~p~~llEAma~-------------------G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai 364 (406)
T PRK15427 304 LPSVTGADGDMEGIPVALMEAMAV-------------------GIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRL 364 (406)
T ss_pred ECCccCCCCCccCccHHHHHHHhC-------------------CCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHH
Confidence 99984 9999999999999 67899999999999883 48999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHHHHHH
Q 003682 448 DSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLE 486 (803)
Q Consensus 448 ~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~ 486 (803)
.+++++++++++...+..++++ ..+++...++++.+-++
T Consensus 365 ~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 365 AAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 9999977777777777777776 45899988888877654
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.5e-22 Score=224.20 Aligned_cols=286 Identities=17% Similarity=0.186 Sum_probs=206.1
Q ss_pred CeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhc---CCC--cHHHH--HHHhcCCEEeccCHhhHHHHHHH
Q 003682 141 DFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRT---LPI--RDELL--RALLNADLIGFHTFDYARHFLSC 213 (803)
Q Consensus 141 d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~---lp~--~~~il--~~ll~~dligf~~~~~~~~Fl~~ 213 (803)
|+|++|++...+++.++++. .+.|+.+.+|..++-...+.. .|. ...++ ..+-.+|.+.+.+....+.+...
T Consensus 103 Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~ 181 (405)
T TIGR03449 103 DLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVRH 181 (405)
T ss_pred CeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH
Confidence 99999987665555555543 467899999965432111110 111 11222 23456899999888777766541
Q ss_pred HHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCcccccCH
Q 003682 214 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGI 290 (803)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~~Kgi 290 (803)
.+ ....++.++|+|+|.+.|.+. + . ...+.++ .++++|+++||+.+.||+
T Consensus 182 ----~~---------------~~~~ki~vi~ngvd~~~~~~~---~--~---~~~~~~~~~~~~~~~i~~~G~l~~~K~~ 234 (405)
T TIGR03449 182 ----YD---------------ADPDRIDVVAPGADLERFRPG---D--R---ATERARLGLPLDTKVVAFVGRIQPLKAP 234 (405)
T ss_pred ----cC---------------CChhhEEEECCCcCHHHcCCC---c--H---HHHHHhcCCCCCCcEEEEecCCCcccCH
Confidence 11 112367789999999888532 1 1 1223333 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCc-hhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRG-RDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 369 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~-~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly 369 (803)
..+++|++++++++|+. ++.|+++|.+. +++ +..++++ +++.+ .+..+.+.|.|.++.+++..+|
T Consensus 235 ~~li~a~~~l~~~~~~~--~~~l~ivG~~~-~~g~~~~~~l~----~~~~~-------~~l~~~v~~~g~~~~~~~~~~l 300 (405)
T TIGR03449 235 DVLLRAVAELLDRDPDR--NLRVIVVGGPS-GSGLATPDALI----ELAAE-------LGIADRVRFLPPRPPEELVHVY 300 (405)
T ss_pred HHHHHHHHHHHhhCCCc--ceEEEEEeCCC-CCcchHHHHHH----HHHHH-------cCCCceEEECCCCCHHHHHHHH
Confidence 99999999999988872 46788888644 223 3333333 33333 2334456778899999999999
Q ss_pred HhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHH
Q 003682 370 VIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEA 446 (803)
Q Consensus 370 ~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~a 446 (803)
+.||++++||..||||++++|||+| |.|+|+|+.+|..+.+. .|++++|.|++++|++
T Consensus 301 ~~ad~~v~ps~~E~~g~~~lEAma~-------------------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~ 361 (405)
T TIGR03449 301 RAADVVAVPSYNESFGLVAMEAQAC-------------------GTPVVAARVGGLPVAVADGETGLLVDGHDPADWADA 361 (405)
T ss_pred HhCCEEEECCCCCCcChHHHHHHHc-------------------CCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHH
Confidence 9999999999999999999999999 67899999999888873 3899999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHH
Q 003682 447 MDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERA 488 (803)
Q Consensus 447 i~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 488 (803)
|.++++. ++.+....+..++.++.+++...++++++-+.++
T Consensus 362 i~~~l~~-~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 362 LARLLDD-PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999984 4455555556666677799999998888776653
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=233.18 Aligned_cols=311 Identities=16% Similarity=0.199 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHHHhh-cCCCCCeEEEeCccccchHHHHHhhCC--CCeEEEEEecCCCC----hhhhhcCCCc-------
Q 003682 121 YVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKRFN--RVKLGFFLHSPFPS----SEIYRTLPIR------- 186 (803)
Q Consensus 121 Y~~vN~~fa~~i~~~-~~~~~d~iwihDyhl~llp~~lr~~~~--~~~i~~flH~pfP~----~~~~~~lp~~------- 186 (803)
|...++..++.+.+. .+| |+|++||+|..++|.++++... ++|+.++.|...+. .+.+..+...
T Consensus 111 ~~~f~~a~~~~~~~~~~~~--DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~ 188 (473)
T TIGR02095 111 FAFFSRAAAELLSGLGWQP--DVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHME 188 (473)
T ss_pred HHHHHHHHHHHHHhcCCCC--CEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCch
Confidence 444455555544332 345 9999999999999999988764 38999999976421 1222111111
Q ss_pred -------HH-HHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCC
Q 003682 187 -------DE-LLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNL 258 (803)
Q Consensus 187 -------~~-il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~ 258 (803)
-. +..++..+|.|-..++.+++..... ..|... .+. ...+..++.++|+|||.+.|.+....
T Consensus 189 ~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~~l---~~~----l~~~~~ki~~I~NGid~~~~~p~~~~ 258 (473)
T TIGR02095 189 GLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGYGL---DGV----LKARSGKLRGILNGIDTEVWNPATDP 258 (473)
T ss_pred hhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCccc---hhH----HHhcCCCeEEEeCCCCccccCCCCCc
Confidence 01 1224555666655555555443321 000000 000 01133477889999999988643110
Q ss_pred c-----------hHHHHHHHHHHHhC-----CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC
Q 003682 259 P-----------ETEAKVAELQDQFK-----GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARG 322 (803)
Q Consensus 259 ~-----------~~~~~~~~l~~~~~-----~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~ 322 (803)
. ........++++++ ++++|+++||+.+.||+..+++|++++.++. +.|+++|.+.
T Consensus 259 ~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g~-- 330 (473)
T TIGR02095 259 YLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTGD-- 330 (473)
T ss_pred ccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCCC--
Confidence 0 01112334566652 6789999999999999999999999987642 4588887432
Q ss_pred CchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccc
Q 003682 323 RGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLD 402 (803)
Q Consensus 323 ~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~ 402 (803)
+ ++.+++++++.+. +. .++++ ...+.+++..+|+.||++++||.+||||++.+|||+|
T Consensus 331 --~---~~~~~l~~~~~~~----~~----~v~~~-~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~-------- 388 (473)
T TIGR02095 331 --P---ELEEALRELAERY----PG----NVRVI-IGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRY-------- 388 (473)
T ss_pred --H---HHHHHHHHHHHHC----CC----cEEEE-EcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHC--------
Confidence 2 3455555655442 11 13444 4567888899999999999999999999999999999
Q ss_pred cccCCCCCCCCCceEEecccccccccCC---------CCceeCCCCHHHHHHHHHHHhCC---CHHHHHHHHHHhhcccc
Q 003682 403 MTLGLDPSTAKSSMLVVSEFVGCSPSLS---------GAIRVNPWNIDAVAEAMDSALGV---SDAEKQMRHEKHYRYVS 470 (803)
Q Consensus 403 ~~~~~~~~~~~~g~vV~S~~~G~~~~l~---------~~~lvnP~d~~~~a~ai~~aL~~---~~~er~~r~~~~~~~v~ 470 (803)
|.|+|+|+.+|..+.+. +|++++|.|+++++++|.+++.+ .++.+....++.. ..
T Consensus 389 -----------G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~ 455 (473)
T TIGR02095 389 -----------GTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQ 455 (473)
T ss_pred -----------CCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--cc
Confidence 67899999999999882 37999999999999999999873 3333333333322 25
Q ss_pred cCCHHHHHHHHHHHHH
Q 003682 471 THDVAYWARSFLQDLE 486 (803)
Q Consensus 471 ~~~~~~W~~~~l~~l~ 486 (803)
.+++.+.++++++..+
T Consensus 456 ~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 456 DFSWDKSAKQYVELYR 471 (473)
T ss_pred CCCcHHHHHHHHHHHH
Confidence 6888888888876554
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-22 Score=228.79 Aligned_cols=302 Identities=15% Similarity=0.168 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCC--hhh-hh-cCCCc-------
Q 003682 118 WQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS--SEI-YR-TLPIR------- 186 (803)
Q Consensus 118 w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~--~~~-~~-~lp~~------- 186 (803)
+.....+-+.......+.++| |+|+.| +.+....++++.+|++++..++|..+-. .+. |. ..+.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (396)
T cd03818 68 VLRGQAVARALLALRAKGFRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRL 143 (396)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHH
Confidence 333444444433333445567 999999 5667778899999999998887744311 111 10 11111
Q ss_pred -HH---HHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHH
Q 003682 187 -DE---LLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETE 262 (803)
Q Consensus 187 -~~---il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~ 262 (803)
.. ....+-.+|.+-..+......|.. .. ..++.++|+|||.+.|.+.. ...
T Consensus 144 ~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~--------------------~~--~~ki~vI~ngvd~~~f~~~~---~~~ 198 (396)
T cd03818 144 RNRNALILLALAQADAGVSPTRWQRSTFPA--------------------EL--RSRISVIHDGIDTDRLRPDP---QAR 198 (396)
T ss_pred HHhhhHhHHHHHhCCEEECCCHHHHhhCcH--------------------hh--ccceEEeCCCccccccCCCc---hhh
Confidence 11 123455677766655433332221 00 13678899999999886421 111
Q ss_pred HHHHHHHHH---hCCCEEEEeecC-cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchh---HHHHHHHHH
Q 003682 263 AKVAELQDQ---FKGQIVMLGVDD-MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRD---VQEVQSETH 335 (803)
Q Consensus 263 ~~~~~l~~~---~~~~~iil~V~R-ld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~---~~~l~~~v~ 335 (803)
...+.. ..++++|+++|| +.+.||+..+++|+..+.+++|+++ |+++|......+.. ...++++
T Consensus 199 ---~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~-- 269 (396)
T cd03818 199 ---LRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQH-- 269 (396)
T ss_pred ---hcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHH--
Confidence 111111 146789999998 9999999999999999999888876 88888532111110 0112221
Q ss_pred HHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCc
Q 003682 336 ATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSS 415 (803)
Q Consensus 336 ~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g 415 (803)
+..+++.+.+ . +.+.|.|.++.+++.++|+.||++++||..||+|++++||||| |.
T Consensus 270 -~~~~~~~~~~---~-~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~-------------------G~ 325 (396)
T cd03818 270 -MLDELGGRLD---L-SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMAC-------------------GC 325 (396)
T ss_pred -HHHHhhcccC---c-ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHC-------------------CC
Confidence 2222222111 1 3456778999999999999999999999999999999999999 67
Q ss_pred eEEecccccccccCC---CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccccc-CCHHHHHHHHH
Q 003682 416 MLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSFL 482 (803)
Q Consensus 416 ~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~~l 482 (803)
|+|+|+.+|..+.+. +|++++|.|++++|++|.+++..+ +.+....+..++++.+ +++...+++++
T Consensus 326 PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 326 LVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred CEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 899999999998883 489999999999999999999854 5556666677777766 77777666654
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=215.96 Aligned_cols=235 Identities=14% Similarity=0.101 Sum_probs=151.6
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeCCc
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYG 608 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~~~ 608 (803)
+|+|+|++|+||||++ ++..+++.++++|++| ++.|+.|++||||+...+...+..+. ..++++.||++|+.++.
T Consensus 2 ~~~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l-~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~ 77 (273)
T PRK00192 2 MMKLLVFTDLDGTLLD---HHTYSYEPAKPALKAL-KEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKN 77 (273)
T ss_pred CcceEEEEcCcccCcC---CCCcCcHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEeccc
Confidence 5799999999999999 6677889999999998 89999999999999999999887763 23689999999987543
Q ss_pred e-------------eEEeecCCCCccHHHHHHHHHHHHhhcCCCc--eEeec---cc----eEEEe----ec--cCCCcc
Q 003682 609 V-------------DWETCVSVPDFSWKQIAEPVMKLYTETTDGS--TIETK---ES----ALVWN----FQ--YADPDF 660 (803)
Q Consensus 609 ~-------------~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~--~ie~k---~~----~~~~~----~~--~~d~~~ 660 (803)
. .|...... . .+.+.+++..+....... .+... +. .+... .. .....+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (273)
T PRK00192 78 YFPFQPDGERLKGDYWVIELGP---P-YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPF 153 (273)
T ss_pred ccccCCccccccCCceEEEcCC---C-HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCce
Confidence 1 12111111 1 123333333222211000 00000 00 00000 00 000000
Q ss_pred chhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCc-ccEEEEeCChhhHHHHHHcchh
Q 003682 661 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLP-DFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 661 ~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~-d~vla~GD~~NDi~Mf~~ag~s 739 (803)
......+..+.+.+.+...+..+..+..++||+|.+ +||.|++++++++ |+++ +++++|||+.||++||+.+|.+
T Consensus 154 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~---~i~~~~~v~~~GDs~NDi~m~~~ag~~ 229 (273)
T PRK00192 154 LWNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELY---RRQDGVETIALGDSPNDLPMLEAADIA 229 (273)
T ss_pred eecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHH---hccCCceEEEEcCChhhHHHHHhCCee
Confidence 000011223334444444455566677899999999 9999999999999 9999 9999999999999999999998
Q ss_pred cCCCCCCCCcceEEEEeCCCCccc-eeEe----CCHhHHHHHHHHHHH
Q 003682 740 AAGPSLSPVAEVFACTVGQKPSKA-KYYL----DDTAEILRMLLGLAE 782 (803)
Q Consensus 740 ~a~~~~~~~~~~~~v~vG~~~s~A-~~~v----~~~~ev~~~L~~l~~ 782 (803)
++|+|+++..+. .....| ++.. ++.++|.+.|+++..
T Consensus 230 vam~NA~~~~k~------~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 230 VVVPGPDGPNPP------LLPGIADGEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred EEeCCCCCCCcc------cCccccCCceEEecCCCcHHHHHHHHHHHh
Confidence 888776653320 001223 3433 457899999998754
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-22 Score=226.21 Aligned_cols=281 Identities=14% Similarity=0.131 Sum_probs=196.0
Q ss_pred HhhcCCCCCeEEEeCccccc-hHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHH-HhcCCEEeccCHhhHHHH
Q 003682 133 MEVISPDDDFVWVHDYHLMV-LPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRA-LLNADLIGFHTFDYARHF 210 (803)
Q Consensus 133 ~~~~~~~~d~iwihDyhl~l-lp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~-ll~~dligf~~~~~~~~F 210 (803)
++..+| |+|++|+++..+ ....+..+..+.|+.+..|..|+..+.... ....+.+- +-.+|.+.+.+....+.+
T Consensus 84 ~~~~~~--DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~ 159 (398)
T cd03796 84 LIRERI--TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENT 159 (398)
T ss_pred HHhcCC--CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHH
Confidence 344567 999999987543 334443444568999999987753332110 11112222 335777777766555443
Q ss_pred HHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCH
Q 003682 211 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 290 (803)
Q Consensus 211 l~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi 290 (803)
... .+ ....++.++|+|+|.+.|.+... . ..+++++|+++||+.+.||+
T Consensus 160 ~~~----~~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~ 208 (398)
T cd03796 160 VLR----AS---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGI 208 (398)
T ss_pred HHH----hC---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCH
Confidence 221 01 11235678899999988853211 0 12467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 370 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~ 370 (803)
..+++|+..+.+++|+++ |+++|. ++..+++++ ++.+ .+..+.+.+.|.++.+++..+|+
T Consensus 209 ~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l~~----~~~~-------~~l~~~v~~~G~~~~~~~~~~l~ 268 (398)
T cd03796 209 DLLVGIIPEICKKHPNVR----FIIGGD-----GPKRILLEE----MREK-------YNLQDRVELLGAVPHERVRDVLV 268 (398)
T ss_pred HHHHHHHHHHHhhCCCEE----EEEEeC-----CchHHHHHH----HHHH-------hCCCCeEEEeCCCCHHHHHHHHH
Confidence 999999999988888765 888873 333334443 3333 23334456678899999999999
Q ss_pred hcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC-C-CceeCCCCHHHHHHHHH
Q 003682 371 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-G-AIRVNPWNIDAVAEAMD 448 (803)
Q Consensus 371 ~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~-~-~~lvnP~d~~~~a~ai~ 448 (803)
.||++++||..||||++++||||| |.|||+|+.+|..+.+. + +++++| |.++++++|.
T Consensus 269 ~ad~~v~pS~~E~~g~~~~EAma~-------------------G~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~ 328 (398)
T cd03796 269 QGHIFLNTSLTEAFCIAIVEAASC-------------------GLLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLE 328 (398)
T ss_pred hCCEEEeCChhhccCHHHHHHHHc-------------------CCCEEECCCCCchhheeCCceeecCC-CHHHHHHHHH
Confidence 999999999999999999999999 67899999999998883 3 444544 9999999999
Q ss_pred HHhCCCHHHHHHHHHHhhc-ccccCCHHHHHHHHHHHHHHHH
Q 003682 449 SALGVSDAEKQMRHEKHYR-YVSTHDVAYWARSFLQDLERAC 489 (803)
Q Consensus 449 ~aL~~~~~er~~r~~~~~~-~v~~~~~~~W~~~~l~~l~~~~ 489 (803)
+++.++.+.+.. .+..++ ..+.+++..-++++++.++++.
T Consensus 329 ~~l~~~~~~~~~-~~~~~~~~~~~fs~~~~~~~~~~~y~~l~ 369 (398)
T cd03796 329 EAISILRTGKHD-PWSFHNRVKKMYSWEDVAKRTEKVYDRIL 369 (398)
T ss_pred HHHhChhhhhhH-HHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 999865544333 333334 4566999999999988887654
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-22 Score=213.02 Aligned_cols=227 Identities=15% Similarity=0.079 Sum_probs=146.3
Q ss_pred EEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeCCcee--
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGVD-- 610 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~~~~~-- 610 (803)
+|++|+||||++ .++.+.+.++++|++| ++.|+.|++||||+...+.+++..+. ..+++++||++|+..++..
T Consensus 1 li~~DlDGTll~---~~~~~~~~~~~~i~~l-~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~ 76 (256)
T TIGR01486 1 WIFTDLDGTLLD---PHGYDWGPAKEVLERL-QELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTE 76 (256)
T ss_pred CEEEcCCCCCcC---CCCcCchHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccC
Confidence 589999999998 5553445799999998 88999999999999999999998764 3579999999998865422
Q ss_pred ---EEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccc---------eEEEe------eccCCCccchhhHHHHHHHH
Q 003682 611 ---WETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKES---------ALVWN------FQYADPDFGSCQAKELLDHL 672 (803)
Q Consensus 611 ---~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~---------~~~~~------~~~~d~~~~~~~~~el~~~l 672 (803)
|.... ..++ +.+.++++.+....+..+...... .+... .......+ .. ..+..+.+
T Consensus 77 ~~~~~~~~---~i~~-~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~ 150 (256)
T TIGR01486 77 PEYPVIAL---GIPY-EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETI-LW-SEERRERF 150 (256)
T ss_pred CCeEEEEc---CCCH-HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCce-ec-ChHHHHHH
Confidence 11111 1111 334444443322111100000000 00000 00000000 00 11223334
Q ss_pred HHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCC--cccEEEEeCChhhHHHHHHcchhcCCCCCCCCcc
Q 003682 673 ESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGML--PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAE 750 (803)
Q Consensus 673 ~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~--~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~ 750 (803)
.+.+......+..+..++||+|++++||.|++++++++ |++ .+++++|||+.||++||+.+|.++||+|+++...
T Consensus 151 ~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~---~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~ 227 (256)
T TIGR01486 151 TEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFY---NQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNV 227 (256)
T ss_pred HHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHH---hhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCcc
Confidence 44444334555556679999999999999999999999 999 9999999999999999999999887777653110
Q ss_pred eEEEEeCCCCcc--ce-eEe--CCHhHHHHHHHHH
Q 003682 751 VFACTVGQKPSK--AK-YYL--DDTAEILRMLLGL 780 (803)
Q Consensus 751 ~~~v~vG~~~s~--A~-~~v--~~~~ev~~~L~~l 780 (803)
..+.. |. |++ ++.++|.+.|+++
T Consensus 228 -------~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 228 -------SLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred -------ccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 01222 43 665 4679999999876
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=211.77 Aligned_cols=231 Identities=16% Similarity=0.228 Sum_probs=146.5
Q ss_pred eEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCc--EEecCcEEEEeCCce
Q 003682 533 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLG--IAAEHGYFVRPNYGV 609 (803)
Q Consensus 533 kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~--lia~nGa~i~~~~~~ 609 (803)
.+|++||||||+++...+...++++.++++++ .++|+.|++||||+..+++++...++ ..+ ++++||+.|+.++..
T Consensus 2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~-~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~ 80 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDH-RGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE 80 (249)
T ss_pred eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHh-hccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC
Confidence 48999999999974334577889999999998 89999999999999999999976542 123 789999999876421
Q ss_pred ----eEEeecCCCCccHH-HHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCC---e
Q 003682 610 ----DWETCVSVPDFSWK-QIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEP---V 681 (803)
Q Consensus 610 ----~~~~~~~~~~~~~~-~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~---~ 681 (803)
.|.... ...|. +.+..+...+....+......+...+.+..... ...++.+.+.+.+...+ .
T Consensus 81 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~l~~~l~~~~~~~~ 150 (249)
T TIGR01485 81 VPDQHWAEYL---SEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPE-------AAPEVIKQLTEMLKETGLDVK 150 (249)
T ss_pred cCCHHHHHHH---hcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechh-------hhhHHHHHHHHHHHhcCCCEE
Confidence 111110 01121 112222222322222222233334444432211 12233444444444322 3
Q ss_pred EEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHH-cchhcCCCCCCCCcceEEEEeCCCC
Q 003682 682 SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV-IKSAAAGPSLSPVAEVFACTVGQKP 760 (803)
Q Consensus 682 ~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~-ag~s~a~~~~~~~~~~~~v~vG~~~ 760 (803)
.+.++..++||+|++++||.|++++++++ |++++++++|||+.||++||+. ++.+++|+|+.+..+.. +-...
T Consensus 151 ~~~~~~~~ldi~~~~~~K~~al~~l~~~~---~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~---~~~~~ 224 (249)
T TIGR01485 151 LIYSSGKDLDILPQGSGKGQALQYLLQKL---AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQW---YDENA 224 (249)
T ss_pred EEEECCceEEEEeCCCChHHHHHHHHHHc---CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHH---HHhcc
Confidence 44678899999999999999999999999 9999999999999999999998 55654444432211100 00000
Q ss_pred ccceeEeC--CHhHHHHHHHHH
Q 003682 761 SKAKYYLD--DTAEILRMLLGL 780 (803)
Q Consensus 761 s~A~~~v~--~~~ev~~~L~~l 780 (803)
....|+.+ .++++++.|+++
T Consensus 225 ~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 225 KDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred cCcEEEecCCCcHHHHHHHHHc
Confidence 11225554 468888888765
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-21 Score=205.27 Aligned_cols=199 Identities=15% Similarity=0.156 Sum_probs=128.4
Q ss_pred hcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC--CC-CcEEecCcEEEEe
Q 003682 529 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC--EG-LGIAAEHGYFVRP 605 (803)
Q Consensus 529 ~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l--~~-l~lia~nGa~i~~ 605 (803)
.|++|+|++||||||++ +++.+++.++++|+++ +++|+.|+|||||++..+.+.++.. .. ..+++.||+.|+.
T Consensus 2 ~~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~ 77 (247)
T PTZ00174 2 EMKKTILLFDVDGTLTK---PRNPITQEMKDTLAKL-KSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYK 77 (247)
T ss_pred CCCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEE
Confidence 46789999999999999 7889999999999998 9999999999999999998888532 12 2578999999987
Q ss_pred CCceeEEeecCC-CCccHHHHHHHHHHHH-----hhcCCCceEeeccceEEEeec-cCCC-----c---c-c-hhhHHHH
Q 003682 606 NYGVDWETCVSV-PDFSWKQIAEPVMKLY-----TETTDGSTIETKESALVWNFQ-YADP-----D---F-G-SCQAKEL 668 (803)
Q Consensus 606 ~~~~~~~~~~~~-~~~~~~~~~~~i~~~y-----~~~~~g~~ie~k~~~~~~~~~-~~d~-----~---~-~-~~~~~el 668 (803)
.+...+...++. .+.+....+....+.+ .....+.+...........+. .... . + . .....++
T Consensus 78 ~~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (247)
T PTZ00174 78 DGELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKF 157 (247)
T ss_pred CCeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHH
Confidence 655444443221 1222222222222111 011112232222111111110 0000 0 0 0 0112345
Q ss_pred HHHHHHHhcCCCeEEEE-CCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeC----ChhhHHHHHHcch
Q 003682 669 LDHLESVLANEPVSVKS-GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVIKS 738 (803)
Q Consensus 669 ~~~l~~~l~~~~~~v~~-g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD----~~NDi~Mf~~ag~ 738 (803)
.+.+.+.+.+....... +..++||+|+|+|||+||++|+++ +++++|||| +.||++||+.++.
T Consensus 158 ~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~-------~~eviafGD~~~~~~NDieMl~~~~~ 225 (247)
T PTZ00174 158 IQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND-------FKEIHFFGDKTFEGGNDYEIYNDPRT 225 (247)
T ss_pred HHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh-------hhhEEEEcccCCCCCCcHhhhhcCCC
Confidence 55555555443333333 457999999999999999999986 489999999 9999999998754
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=223.83 Aligned_cols=282 Identities=15% Similarity=0.191 Sum_probs=196.0
Q ss_pred HHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCc-H---HHHHH-HhcCCEEeccCHhh
Q 003682 132 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIR-D---ELLRA-LLNADLIGFHTFDY 206 (803)
Q Consensus 132 i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~-~---~il~~-ll~~dligf~~~~~ 206 (803)
+++..+| |+|++|+...+.++.++..+..++|+.+.+|.-+|........++. . .+.+. .-.+|.|...+...
T Consensus 139 ~i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~ 216 (465)
T PLN02871 139 EVARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPAL 216 (465)
T ss_pred HHHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHH
Confidence 3444567 9999998776666665544445788999999765542110011110 0 11111 22467777766655
Q ss_pred HHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh----CCCEEEEeec
Q 003682 207 ARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF----KGQIVMLGVD 282 (803)
Q Consensus 207 ~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~----~~~~iil~V~ 282 (803)
.+.+.. .+. ....++.++|+|||.+.|.+.... ..++.++ +++++|+++|
T Consensus 217 ~~~l~~-----~~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vG 270 (465)
T PLN02871 217 GKELEA-----AGV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVG 270 (465)
T ss_pred HHHHHH-----cCC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeC
Confidence 554442 010 012357789999999988642211 1123322 3678999999
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCH
Q 003682 283 DMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQF 362 (803)
Q Consensus 283 Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~ 362 (803)
|+.+.||+..+++|++++ |++ .|+++| +++..++ +++++.. . + +.|.|.++.
T Consensus 271 rl~~~K~~~~li~a~~~~----~~~----~l~ivG-----~G~~~~~----l~~~~~~-------~---~-V~f~G~v~~ 322 (465)
T PLN02871 271 RLGAEKNLDFLKRVMERL----PGA----RLAFVG-----DGPYREE----LEKMFAG-------T---P-TVFTGMLQG 322 (465)
T ss_pred CCchhhhHHHHHHHHHhC----CCc----EEEEEe-----CChHHHH----HHHHhcc-------C---C-eEEeccCCH
Confidence 999999999999988653 554 488887 3343333 3333322 1 2 456788999
Q ss_pred HHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC------CCceeC
Q 003682 363 YERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS------GAIRVN 436 (803)
Q Consensus 363 ~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~------~~~lvn 436 (803)
+++..+|+.||+||+||..||||++++||||| |.|+|+|+.+|..+.+. +|++++
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~-------------------G~PVI~s~~gg~~eiv~~~~~~~~G~lv~ 383 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMAS-------------------GVPVVAARAGGIPDIIPPDQEGKTGFLYT 383 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHc-------------------CCCEEEcCCCCcHhhhhcCCCCCceEEeC
Confidence 99999999999999999999999999999999 67899999999988773 289999
Q ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHH-HHHHH
Q 003682 437 PWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQD-LERAC 489 (803)
Q Consensus 437 P~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~-l~~~~ 489 (803)
|.|++++|++|.++++ +++.+....+..+++++++++...++++++. ..++.
T Consensus 384 ~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~ 436 (465)
T PLN02871 384 PGDVDDCVEKLETLLA-DPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAI 436 (465)
T ss_pred CCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 4556666677777788889999999999874 44443
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.4e-21 Score=223.90 Aligned_cols=334 Identities=11% Similarity=0.134 Sum_probs=207.1
Q ss_pred HHhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCC----CChh-hhhcCCCc---
Q 003682 115 RSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPF----PSSE-IYRTLPIR--- 186 (803)
Q Consensus 115 ~~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pf----P~~~-~~~~lp~~--- 186 (803)
.+.|..-..+....++.+....+..-|+|+.|...--+++..++++. ++|..+..|..= +.+. .+..+..+
T Consensus 361 ~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~ 439 (784)
T TIGR02470 361 FEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHF 439 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHh
Confidence 45688888888888877765543112999999766667777776655 578777778431 1111 01101100
Q ss_pred ----HHHHHHHhcCCEEeccCHhhHHHHHHHHH-----HHhCceecccCceeeEEEcC---eEEEEeEecccCChhHHHH
Q 003682 187 ----DELLRALLNADLIGFHTFDYARHFLSCCS-----RMLGVSYQSKRGYIGLEYFG---RTVSIKILPVGIHIGQLQS 254 (803)
Q Consensus 187 ----~~il~~ll~~dligf~~~~~~~~Fl~~~~-----~~l~~~~~~~~~~~~~~~~g---~~~~v~v~p~Gid~~~f~~ 254 (803)
+.-+..|-.||.|--.|+.-...-...+. ..+.+ .+...+ .+| ...++.++|+|+|++.|.+
T Consensus 440 ~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~-----p~Ly~v-vnGid~~~~Ki~VVpPGVD~~iF~P 513 (784)
T TIGR02470 440 SCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTM-----PGLYRV-VHGIDVFDPKFNIVSPGADESIYFP 513 (784)
T ss_pred hhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccc-----cceeee-ecCccCCcCCeEEECCCcChhhcCC
Confidence 00124566688887666432111000000 00000 011111 111 1237788999999999865
Q ss_pred HhCCchHH-HHH----------HHHHHHh-----CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 003682 255 VLNLPETE-AKV----------AELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIAN 318 (803)
Q Consensus 255 ~~~~~~~~-~~~----------~~l~~~~-----~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~ 318 (803)
........ ... ...++.+ +++++|++|||+++.||+..+++||.++.+.. ..+.|+++|.
T Consensus 514 ~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~----~~~~LVIVGG 589 (784)
T TIGR02470 514 YSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLR----ELVNLVVVAG 589 (784)
T ss_pred CCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhC----CCeEEEEEeC
Confidence 32211100 000 0112222 46889999999999999999999998764333 3456888886
Q ss_pred CCCC---CchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCC-CCHHHHHHHHH----hcccceecccccCCCCCcee
Q 003682 319 PARG---RGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTP-LQFYERIAYYV----IAECCLVTAVRDGMNLIPYE 390 (803)
Q Consensus 319 ~~~~---~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~-~~~~~l~aly~----~Adv~v~~S~~EG~~lv~~E 390 (803)
+... ...+..+..+++.+++.+.+ ....+.|.|. .+..++..+|+ .+||||+||.+||||||++|
T Consensus 590 g~~~~~s~d~ee~~~i~~L~~la~~~g-------L~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLE 662 (784)
T TIGR02470 590 KLDAKESKDREEQAEIEKMHNLIDQYQ-------LHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLE 662 (784)
T ss_pred CcccccccchhHHHHHHHHHHHHHHhC-------CCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHH
Confidence 5321 11122233445555555532 2233445554 35566666665 24799999999999999999
Q ss_pred eeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHHHhC---CCHHHHHHHHHH
Q 003682 391 YIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALG---VSDAEKQMRHEK 464 (803)
Q Consensus 391 a~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~---~~~~er~~r~~~ 464 (803)
|||| |.|+|+|+.+|..+.+. +|++|+|.|++++|++|.++++ .+++.+....+.
T Consensus 663 AMAc-------------------GlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~ 723 (784)
T TIGR02470 663 AMTC-------------------GLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQG 723 (784)
T ss_pred HHHc-------------------CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 9999 67899999999999883 4899999999999999999873 345555555666
Q ss_pred hhccc-ccCCHHHHHHHHHHHH
Q 003682 465 HYRYV-STHDVAYWARSFLQDL 485 (803)
Q Consensus 465 ~~~~v-~~~~~~~W~~~~l~~l 485 (803)
.++++ +.+++...++++++..
T Consensus 724 a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 724 GLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHHHHhCCHHHHHHHHHHHH
Confidence 66665 5689999999887654
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-21 Score=225.04 Aligned_cols=330 Identities=13% Similarity=0.174 Sum_probs=201.8
Q ss_pred HHhHHHHHHHHHHHHHHHHhhcC--CCCCeEEEeCccccchHHHHHhhCCCCeEEEEEec-----------CCCChh-hh
Q 003682 115 RSLWQAYVSVNKIFADKVMEVIS--PDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHS-----------PFPSSE-IY 180 (803)
Q Consensus 115 ~~~w~~Y~~vN~~fa~~i~~~~~--~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~-----------pfP~~~-~~ 180 (803)
.+.|..-.+++...++.+....+ | |+|+-|...--+++..|+++. ++|..++.|. +|...+ -|
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~P--DlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y 460 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKP--DLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKY 460 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhh
Confidence 45788888888888877755443 5 999999655556777776665 6889999993 221111 11
Q ss_pred hcC-CCcHHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceeccc-----Ccee----eEEEcCeEEEEeEecccCChh
Q 003682 181 RTL-PIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSK-----RGYI----GLEYFGRTVSIKILPVGIHIG 250 (803)
Q Consensus 181 ~~l-p~~~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~-----~~~~----~~~~~g~~~~v~v~p~Gid~~ 250 (803)
+.. -...+. ..|-.||.|--.|+.-....-.. + + .+.+- .+.. ++... .-++.++|+|+|..
T Consensus 461 ~~~~r~~aE~-~a~~~Ad~IIasT~qEi~g~~~~---i-~-qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~ 532 (815)
T PLN00142 461 HFSCQFTADL-IAMNHADFIITSTYQEIAGSKDT---V-G-QYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMS 532 (815)
T ss_pred hhhhchHHHH-HHHHhhhHHHhCcHHHHhcccch---h-h-hhhcccccccchhhhhhcccccc--ccCeeEECCCCChh
Confidence 100 000111 13444554443332211100000 0 0 00000 0000 01111 12778899999999
Q ss_pred HHHHHhCCch--------HHHHH---HHHHHHh-----CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEE
Q 003682 251 QLQSVLNLPE--------TEAKV---AELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLV 314 (803)
Q Consensus 251 ~f~~~~~~~~--------~~~~~---~~l~~~~-----~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv 314 (803)
.|.+...... ..... ...++.+ +++++|++|||+++.||+..+++||.++.+..++ +.|+
T Consensus 533 ~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~----~~LV 608 (815)
T PLN00142 533 IYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLREL----VNLV 608 (815)
T ss_pred hcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCC----cEEE
Confidence 8864211000 00000 0011111 3577999999999999999999999988666554 4588
Q ss_pred EEecCCCC-CchhH--HHHHHHHHHHHHHHhcccCCCCccc-EEEec---CCCCHHHHHHHHH-hcccceecccccCCCC
Q 003682 315 QIANPARG-RGRDV--QEVQSETHATVRRINKIFGRPGYQP-VVLID---TPLQFYERIAYYV-IAECCLVTAVRDGMNL 386 (803)
Q Consensus 315 ~i~~~~~~-~~~~~--~~l~~~v~~lv~~in~~~~~~~~~~-v~~~~---~~~~~~~l~aly~-~Adv~v~~S~~EG~~l 386 (803)
++|.+... ..++. .+..+++.+++.+.+ ... |.++. +..+.++++.+|+ ++|+||+||.+||||+
T Consensus 609 IVGgg~d~~~s~d~ee~~el~~L~~La~~lg-------L~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGL 681 (815)
T PLN00142 609 VVGGFIDPSKSKDREEIAEIKKMHSLIEKYN-------LKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGL 681 (815)
T ss_pred EEECCccccccccHHHHHHHHHHHHHHHHcC-------CCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCH
Confidence 88854211 11111 112234555555532 222 33332 2455678888777 5799999999999999
Q ss_pred CceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHHHhC---CCHHHHHH
Q 003682 387 IPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALG---VSDAEKQM 460 (803)
Q Consensus 387 v~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~---~~~~er~~ 460 (803)
|++||||| |.|+|+|+.+|..+.+. +|++|+|.|++++|++|.+++. .+++.+..
T Consensus 682 vvLEAMA~-------------------GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~ 742 (815)
T PLN00142 682 TVVEAMTC-------------------GLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNK 742 (815)
T ss_pred HHHHHHHc-------------------CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 99999999 67899999999999883 3899999999999999988753 35666666
Q ss_pred HHHHhhccc-ccCCHHHHHHHHHHHH
Q 003682 461 RHEKHYRYV-STHDVAYWARSFLQDL 485 (803)
Q Consensus 461 r~~~~~~~v-~~~~~~~W~~~~l~~l 485 (803)
..+..++++ +.+++...++++++-.
T Consensus 743 mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 743 ISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 666666666 6699999999887754
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-21 Score=201.90 Aligned_cols=197 Identities=17% Similarity=0.121 Sum_probs=124.6
Q ss_pred EEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-C-CcEEecCcEEEEeCCce-e
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-G-LGIAAEHGYFVRPNYGV-D 610 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~-l~lia~nGa~i~~~~~~-~ 610 (803)
+|++|+||||++ ++..+++.++++|++| +++|+.|++||||+...++.++..+. . .++|++||+.|+..... .
T Consensus 1 ~i~~DlDGTLL~---~~~~~~~~~~~~l~~l-~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLD---SHSYDWQPAAPWLTRL-QEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcC---CCCCCcHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc
Confidence 589999999999 5565666699999998 88999999999999999999998763 2 46999999999875321 1
Q ss_pred E---EeecCCCCccHHHHHHHHHHHHhhc--CCCceEee------c-cceEEE------eeccCCCccchhhHHHHHHHH
Q 003682 611 W---ETCVSVPDFSWKQIAEPVMKLYTET--TDGSTIET------K-ESALVW------NFQYADPDFGSCQAKELLDHL 672 (803)
Q Consensus 611 ~---~~~~~~~~~~~~~~~~~i~~~y~~~--~~g~~ie~------k-~~~~~~------~~~~~d~~~~~~~~~el~~~l 672 (803)
+ ...... ..+ +.+.++++...+. ..-..... . ...+.. ........+......+..+.+
T Consensus 77 ~~~~~~~~~~--~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (221)
T TIGR02463 77 EPGYPRIILG--ISY-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRF 153 (221)
T ss_pred CCCceEEecC--CCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHH
Confidence 1 111011 111 2233333222111 00000000 0 000000 000000000000011222333
Q ss_pred HHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhc
Q 003682 673 ESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAA 740 (803)
Q Consensus 673 ~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~ 740 (803)
.+.+......+..+..++||+|++++||.|++++++++ |++++++++|||+.||++||+.+|.++
T Consensus 154 ~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~l---gi~~~~vi~~GD~~NDi~ml~~ag~~v 218 (221)
T TIGR02463 154 TALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATY---NQPDVKTLGLGDGPNDLPLLEVADYAV 218 (221)
T ss_pred HHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHh---CCCCCcEEEECCCHHHHHHHHhCCceE
Confidence 33333334555556789999999999999999999999 999999999999999999999999863
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.2e-21 Score=213.89 Aligned_cols=207 Identities=14% Similarity=0.164 Sum_probs=158.0
Q ss_pred EEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh--CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003682 238 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 315 (803)
Q Consensus 238 ~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~--~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~ 315 (803)
.++.++|+|||.+.|.+... .. ....++.+ .++.+|+++||+++.||+..+++|+..++++.|+...++.|++
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~---~~--~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i 234 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRG---DR--SPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVI 234 (374)
T ss_pred hhEEEeccCccccccCCCcc---ch--hhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEE
Confidence 35677899999988753211 11 11112222 4678999999999999999999999999999987666688998
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeee
Q 003682 316 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 395 (803)
Q Consensus 316 i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~ 395 (803)
+|. ++..+++++ ++.+ .+....+++.|. .+++..+|+.||++++||..||||++++|||+|
T Consensus 235 ~G~-----g~~~~~~~~----~~~~-------~~~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~- 295 (374)
T TIGR03088 235 VGD-----GPARGACEQ----MVRA-------AGLAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMAS- 295 (374)
T ss_pred ecC-----CchHHHHHH----HHHH-------cCCcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHc-
Confidence 883 333333433 3333 334456677774 568999999999999999999999999999999
Q ss_pred cCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-cc
Q 003682 396 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-ST 471 (803)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~ 471 (803)
|.|+|+|+.+|..+.+. .|++++|.|++++|++|.++++. ++.+....++.++++ ..
T Consensus 296 ------------------G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~ 356 (374)
T TIGR03088 296 ------------------GLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSD-PAARRAHGAAGRARAEQQ 356 (374)
T ss_pred ------------------CCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHh
Confidence 67899999999999883 38999999999999999999874 445555666666665 56
Q ss_pred CCHHHHHHHHHHHHHH
Q 003682 472 HDVAYWARSFLQDLER 487 (803)
Q Consensus 472 ~~~~~W~~~~l~~l~~ 487 (803)
+++...++++.+...+
T Consensus 357 fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 357 FSINAMVAAYAGLYDQ 372 (374)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 8999888888776654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-21 Score=221.93 Aligned_cols=312 Identities=18% Similarity=0.200 Sum_probs=204.5
Q ss_pred HHHHHHHHHHHHHHHhh-cCCCCCeEEEeCccccchHHHHHhhC-----CCCeEEEEEecCCCCh----hhhhc--CCC-
Q 003682 119 QAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKRF-----NRVKLGFFLHSPFPSS----EIYRT--LPI- 185 (803)
Q Consensus 119 ~~Y~~vN~~fa~~i~~~-~~~~~d~iwihDyhl~llp~~lr~~~-----~~~~i~~flH~pfP~~----~~~~~--lp~- 185 (803)
..|...++...+.+.+. .+| |+|++||+|-.++|.++++.. .+.|+.|+.|.+.+.. ..+.. +++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~p--DviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~ 187 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKP--DIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWE 187 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--cEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCcc
Confidence 34555555555555442 455 999999999999999998764 5789999999864321 11111 111
Q ss_pred ------------c-HHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHH
Q 003682 186 ------------R-DELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQL 252 (803)
Q Consensus 186 ------------~-~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f 252 (803)
. .-+..++..+|.|-..++.+++..++.. . ..+.. -....+..++.++|+|||.+.|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-------~--~~gl~-~~~~~~~~ki~~I~NGid~~~~ 257 (476)
T cd03791 188 ELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-------F--GEGLD-GLLRARAGKLSGILNGIDYDVW 257 (476)
T ss_pred chhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-------C--CcchH-HHHHhccCCeEEEeCCCcCccc
Confidence 0 1222345556666555555555433200 0 00000 0001123578889999999988
Q ss_pred HHHhCCc-----------hHHHHHHHHHHHh-----CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 003682 253 QSVLNLP-----------ETEAKVAELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQI 316 (803)
Q Consensus 253 ~~~~~~~-----------~~~~~~~~l~~~~-----~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i 316 (803)
.+..... ........+++++ +++++|+++||+.+.||+..+++|++++.++. +.|+++
T Consensus 258 ~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~ 331 (476)
T cd03791 258 NPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLVIL 331 (476)
T ss_pred CccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEEEE
Confidence 7432211 0112223455555 46789999999999999999999999987653 448877
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeec
Q 003682 317 ANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQ 396 (803)
Q Consensus 317 ~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~ 396 (803)
|.+. + .+.+.+.+++.+.. ..++++.+ .+.+++..+|+.||++++||..||||++.+|||+|
T Consensus 332 G~g~----~---~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~-- 393 (476)
T cd03791 332 GSGD----P---EYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY-- 393 (476)
T ss_pred ecCC----H---HHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC--
Confidence 7431 2 24445555444421 13555554 45777889999999999999999999999999999
Q ss_pred CCcccccccCCCCCCCCCceEEecccccccccC-C--------CCceeCCCCHHHHHHHHHHHhCCC--HHHHHHHHHHh
Q 003682 397 GNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S--------GAIRVNPWNIDAVAEAMDSALGVS--DAEKQMRHEKH 465 (803)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~--------~~~lvnP~d~~~~a~ai~~aL~~~--~~er~~r~~~~ 465 (803)
|.|+|+|+.+|..+.+ + +|++|+|.|+++++++|.+++... ++.+....++.
T Consensus 394 -----------------G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~ 456 (476)
T cd03791 394 -----------------GTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNA 456 (476)
T ss_pred -----------------CCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 6789999999999988 3 599999999999999999998642 33333333333
Q ss_pred hcccccCCHHHHHHHHHHHH
Q 003682 466 YRYVSTHDVAYWARSFLQDL 485 (803)
Q Consensus 466 ~~~v~~~~~~~W~~~~l~~l 485 (803)
.+ ..+++..-++++++.+
T Consensus 457 ~~--~~fsw~~~a~~~~~~y 474 (476)
T cd03791 457 MA--QDFSWDRSAKEYLELY 474 (476)
T ss_pred hc--cCCChHHHHHHHHHHH
Confidence 22 3478788777776644
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.4e-21 Score=212.21 Aligned_cols=296 Identities=20% Similarity=0.173 Sum_probs=203.2
Q ss_pred HHHHHHHhhc-CCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcC-----C-Cc-HHHHHHHhcCCE
Q 003682 127 IFADKVMEVI-SPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL-----P-IR-DELLRALLNADL 198 (803)
Q Consensus 127 ~fa~~i~~~~-~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~l-----p-~~-~~il~~ll~~dl 198 (803)
.+...+.+.. +| |+|++|++....++..+.+. .+.|+.+..|...+........ + .+ ......+..+|.
T Consensus 90 ~~~~~~~~~~~~~--Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 166 (398)
T cd03800 90 DLLRFLRREGGRP--DLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADR 166 (398)
T ss_pred HHHHHHHhcCCCc--cEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCE
Confidence 3334443332 55 99999988776666666544 4688889999754322110000 0 00 111223456899
Q ss_pred EeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEE
Q 003682 199 IGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVM 278 (803)
Q Consensus 199 igf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~ii 278 (803)
+.+.+......+... .+ ....++.++|+|+|.+.|....... .....+ ....++++|
T Consensus 167 ii~~s~~~~~~~~~~----~~---------------~~~~~~~vi~ng~~~~~~~~~~~~~---~~~~~~-~~~~~~~~i 223 (398)
T cd03800 167 VIASTPQEAEELYSL----YG---------------AYPRRIRVVPPGVDLERFTPYGRAE---ARRARL-LRDPDKPRI 223 (398)
T ss_pred EEEcCHHHHHHHHHH----cc---------------ccccccEEECCCCCccceecccchh---hHHHhh-ccCCCCcEE
Confidence 888877665555431 11 1112367899999998875332111 111111 111467899
Q ss_pred EeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecC
Q 003682 279 LGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDT 358 (803)
Q Consensus 279 l~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~ 358 (803)
+++||+++.||+..+++|+..+.+++|+++ |+++|.......+ ....+++.++.+. +..+.+.+.|
T Consensus 224 ~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~----l~i~G~~~~~~~~---~~~~~~~~~~~~~-------~~~~~v~~~g 289 (398)
T cd03800 224 LAVGRLDPRKGIDTLIRAYAELPELRERAN----LVIVGGPRDDILA---MDEEELRELAREL-------GVIDRVDFPG 289 (398)
T ss_pred EEEcccccccCHHHHHHHHHHHHHhCCCeE----EEEEECCCCcchh---hhhHHHHHHHHhc-------CCCceEEEec
Confidence 999999999999999999999988877655 8888865422211 2223344444442 2334566788
Q ss_pred CCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCcee
Q 003682 359 PLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRV 435 (803)
Q Consensus 359 ~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lv 435 (803)
.++.+++..+|+.||++++||..||||++++|||+| |.|+|+|+.+|..+.+. .|+++
T Consensus 290 ~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~-------------------G~Pvi~s~~~~~~e~i~~~~~g~~~ 350 (398)
T cd03800 290 RVSREDLPALYRAADVFVNPALYEPFGLTALEAMAC-------------------GLPVVATAVGGPRDIVVDGVTGLLV 350 (398)
T ss_pred cCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhc-------------------CCCEEECCCCCHHHHccCCCCeEEe
Confidence 999999999999999999999999999999999999 66799999999998882 48999
Q ss_pred CCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHH
Q 003682 436 NPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFL 482 (803)
Q Consensus 436 nP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 482 (803)
+|.|+++++++|.++++. ++.+....+..++++ +.++++.++++++
T Consensus 351 ~~~~~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 351 DPRDPEALAAALRRLLTD-PALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred CCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 999999999999999975 445555556666666 6789888888765
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.8e-21 Score=200.14 Aligned_cols=218 Identities=15% Similarity=0.164 Sum_probs=141.8
Q ss_pred EEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-C--CcEEecCcEEEEeCCcee
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-G--LGIAAEHGYFVRPNYGVD 610 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~--l~lia~nGa~i~~~~~~~ 610 (803)
+|++||||||++ ++..+++.+ ++++ + +++|+.++++|||+...+++++..+. . ..++++||+.|.......
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~ 74 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQ 74 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCC
Confidence 589999999999 667777766 6776 5 88899999999999999999997662 1 238999999887643210
Q ss_pred EEeecCCCCccHHHHH-----HHHHHHHhhcCCCceEeeccc--eEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEE
Q 003682 611 WETCVSVPDFSWKQIA-----EPVMKLYTETTDGSTIETKES--ALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSV 683 (803)
Q Consensus 611 ~~~~~~~~~~~~~~~~-----~~i~~~y~~~~~g~~ie~k~~--~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v 683 (803)
.+..|.... ...+..+....++..++.+.. ...+++... ++.. ....++.+.+.+. ......+
T Consensus 75 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~-~~~~~~~ 144 (236)
T TIGR02471 75 -------PDRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQ-SQAAKVI 144 (236)
T ss_pred -------CChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhc-cCCEEEE
Confidence 011121111 001122333455554444321 234444432 2211 1123333444332 1111234
Q ss_pred EECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccc
Q 003682 684 KSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKA 763 (803)
Q Consensus 684 ~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A 763 (803)
.++..++|++|+++|||.|++++++++ |++++++++|||+.||++||+.+|.+++|+|+.+. .+..|
T Consensus 145 ~~~~~~~ei~~~~~~K~~al~~l~~~~---g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~----------~k~~a 211 (236)
T TIGR02471 145 LSCGWFLDVLPLRASKGLALRYLSYRW---GLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPE----------LEGLR 211 (236)
T ss_pred EECCceEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHH----------HHHhh
Confidence 567788999999999999999999999 99999999999999999999999875433332211 13445
Q ss_pred e----eEe--CCHhHHHHHHHHH
Q 003682 764 K----YYL--DDTAEILRMLLGL 780 (803)
Q Consensus 764 ~----~~v--~~~~ev~~~L~~l 780 (803)
+ |++ ++.++|.+.|+.+
T Consensus 212 ~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 212 HQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred cCCcEEEcCCCChhHHHHHHHhh
Confidence 5 655 3567899988764
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-20 Score=210.92 Aligned_cols=284 Identities=15% Similarity=0.132 Sum_probs=196.8
Q ss_pred CCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhh-----hcCCCcHHH-HHHHhcCCEEeccCHhhHHHHHHH
Q 003682 140 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY-----RTLPIRDEL-LRALLNADLIGFHTFDYARHFLSC 213 (803)
Q Consensus 140 ~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~-----~~lp~~~~i-l~~ll~~dligf~~~~~~~~Fl~~ 213 (803)
-|+|++|++...+.+.+++ +..+.|+.+.+|..+|..... ........+ ...+-.+|.+-..+....+.+...
T Consensus 84 ~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 3999999988765555444 445788999999866532110 000001111 123445777777666555544421
Q ss_pred HHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCcccccCH
Q 003682 214 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGI 290 (803)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~~Kgi 290 (803)
. -+ -...++.++|+|+|++.|.+. + ....+.++ .++++|+++||+.+.||+
T Consensus 163 ~---~~---------------~~~~~i~vi~ng~~~~~~~~~---~-----~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PD---------------LDPEKVHVIYNGIDTKEYKPD---D-----GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CC---------------CCcceEEEecCCCChhhcCCC---c-----hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 01 112367789999999877531 1 11233333 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 370 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~ 370 (803)
..+++|++++. ++. .++++|.+. +..++.+++++++..++... ..++++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~----~l~i~g~g~-----~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDV----QVVLCAGAP-----DTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcC----cEEEEeCCC-----CcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHHH
Confidence 99999999873 333 366665322 22334555555555443221 23677888899999999999
Q ss_pred hcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCH------H
Q 003682 371 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNI------D 441 (803)
Q Consensus 371 ~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~------~ 441 (803)
.||+||+||..||||++++|||+| |.|+|+|+.+|..+.+. .|++++|.|. +
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~-------------------G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~ 340 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMAC-------------------GTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQA 340 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHc-------------------CCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHH
Confidence 999999999999999999999999 67899999999998883 3899999998 9
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHHHHHHH
Q 003682 442 AVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQDLER 487 (803)
Q Consensus 442 ~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 487 (803)
+++++|.++++. ++++....+..++.+ ..+++..+++++++.+++
T Consensus 341 ~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 341 ELAKAINILLAD-PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 999999999874 555555555555554 569999999998877664
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=7e-21 Score=214.79 Aligned_cols=195 Identities=17% Similarity=0.144 Sum_probs=146.2
Q ss_pred EEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCC-CcEEEEEEe
Q 003682 239 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKR-GKIVLVQIA 317 (803)
Q Consensus 239 ~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~-~~v~lv~i~ 317 (803)
++.++|+|+|.+.|..... ....++++|+++||+.+.||+..+|+||..+.++.|+.. .++.|+++|
T Consensus 213 ~~~vi~~gvd~~~~~~~~~------------~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG 280 (419)
T cd03806 213 KPSIVYPPCDVEELLKLPL------------DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIG 280 (419)
T ss_pred CcEEEcCCCCHHHhccccc------------ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEc
Confidence 5677899999988753210 012356799999999999999999999999999887631 246688888
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecC
Q 003682 318 NPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 318 ~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~ 397 (803)
.... ++..++.+++++++.+. +..+.+.|.+.++.+++..+|+.||+++.||..||||++++|||||
T Consensus 281 ~~~~---~~~~~~~~~L~~~~~~l-------~l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~--- 347 (419)
T cd03806 281 SCRN---EDDEKRVEDLKLLAKEL-------GLEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAA--- 347 (419)
T ss_pred CCCC---cccHHHHHHHHHHHHHh-------CCCCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHc---
Confidence 5321 11223555566666653 3334567778899999999999999999999999999999999999
Q ss_pred CcccccccCCCCCCCCCceEEecccccccc-cCC------CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccc
Q 003682 398 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSP-SLS------GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVS 470 (803)
Q Consensus 398 ~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~-~l~------~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~ 470 (803)
|.|+|+|+.+|..+ .+. .|++++ |++++|++|.++++++++++..+.+..++...
T Consensus 348 ----------------G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~ 409 (419)
T cd03806 348 ----------------GLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVK 409 (419)
T ss_pred ----------------CCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 66799999888654 343 378874 99999999999999988777655444444445
Q ss_pred cCCHHH
Q 003682 471 THDVAY 476 (803)
Q Consensus 471 ~~~~~~ 476 (803)
+++...
T Consensus 410 ~fs~~~ 415 (419)
T cd03806 410 RFSDEE 415 (419)
T ss_pred hhCHHH
Confidence 565544
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=208.49 Aligned_cols=281 Identities=19% Similarity=0.225 Sum_probs=195.5
Q ss_pred HHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHH-hcCCEEeccCHhhHHH
Q 003682 131 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRAL-LNADLIGFHTFDYARH 209 (803)
Q Consensus 131 ~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~l-l~~dligf~~~~~~~~ 209 (803)
++++..+| |+|++|.+|..++..+++...+..++....|...+...+ +..+.+.. ..++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 34456677 899999999888888887776677888888854322111 01111110 1134333334444443
Q ss_pred HHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCccc
Q 003682 210 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDI 286 (803)
Q Consensus 210 Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~ 286 (803)
|... + .-...++.++|+|+|...|.... .....+++.+ +++++++++||+.+
T Consensus 145 ~~~~-----~--------------~~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIAS-----K--------------AFNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhc-----c--------------CCCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 3321 0 00123567889999988775311 1223344544 46789999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHH
Q 003682 287 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 366 (803)
Q Consensus 287 ~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~ 366 (803)
.||+..+++|+.++.+++|+++ |+++|. ++..+++++.+ .+. +..+.+.+.|. .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~~~~~~----~~~-------~~~~~v~~~g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRATLERLI----KAL-------GLSNRVKLLGL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHHHHHHH----Hhc-------CCCCcEEEecc--cccHH
Confidence 9999999999999998888765 888873 33333344333 332 22334555555 45899
Q ss_pred HHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC-CCCceeCCCCHHHHHH
Q 003682 367 AYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAE 445 (803)
Q Consensus 367 aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~~~~lvnP~d~~~~a~ 445 (803)
.+|+.||++++||..||||++++|||+| |.|+|+|+.+|..+.+ ++|..++|.|++++++
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~-------------------G~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~ 318 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMAC-------------------ELPVVATDAGGVREVVGDSGLIVPISDPEALAN 318 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHc-------------------CCCEEEecCCChhhEecCCceEeCCCCHHHHHH
Confidence 9999999999999999999999999999 6679999999988888 4589999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHH
Q 003682 446 AMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 485 (803)
Q Consensus 446 ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 485 (803)
+|.+++..++..+..+.+........+++..+++++++-+
T Consensus 319 ~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 319 KIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 9999998777777666665333456699999998887654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-20 Score=211.17 Aligned_cols=294 Identities=10% Similarity=0.034 Sum_probs=188.3
Q ss_pred HHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeE-EEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHH
Q 003682 131 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKL-GFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARH 209 (803)
Q Consensus 131 ~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i-~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~ 209 (803)
.+++..+| |+|+.|++.-.++..+..... ..|+ ....|. ++....-+.+-.. ...+..++++.-.+. ++.+
T Consensus 274 ~~ir~~rp--DIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~~~r~~~~e---~~~~~~a~~i~~~sd-~v~~ 345 (578)
T PRK15490 274 PHLCERKL--DYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVVRKRLFKPE---YEPLYQALAVVPGVD-FMSN 345 (578)
T ss_pred HHHHHcCC--CEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcchhhHHHHH---HHHhhhhceeEecch-hhhc
Confidence 34556677 999999999877766665544 3444 444565 3322111100000 012333454433232 3333
Q ss_pred HHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh-CCCEEEEeecCccccc
Q 003682 210 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMDIFK 288 (803)
Q Consensus 210 Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~-~~~~iil~V~Rld~~K 288 (803)
.....+.+.. .++....++.++|+|||++.|.+....+ ......++..+ .+.++|++|+|+.+.|
T Consensus 346 s~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~K 411 (578)
T PRK15490 346 NHCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDK 411 (578)
T ss_pred cHHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhc
Confidence 3322222110 0011234678899999999886432111 11111222223 3457899999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHH
Q 003682 289 GISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAY 368 (803)
Q Consensus 289 gi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~al 368 (803)
|...+++|+.+++++.|+++ |+++|. ++..+ ++++++.+ .++.+.+.|.|. .+++..+
T Consensus 412 g~~~LI~A~a~llk~~pdir----LvIVGd-----G~~~e----eLk~la~e-------lgL~d~V~FlG~--~~Dv~~~ 469 (578)
T PRK15490 412 NPFAWIDFAARYLQHHPATR----FVLVGD-----GDLRA----EAQKRAEQ-------LGILERILFVGA--SRDVGYW 469 (578)
T ss_pred CHHHHHHHHHHHHhHCCCeE----EEEEeC-----chhHH----HHHHHHHH-------cCCCCcEEECCC--hhhHHHH
Confidence 99999999999999888765 888883 34333 34444444 333345566665 5689999
Q ss_pred HHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHH
Q 003682 369 YVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAE 445 (803)
Q Consensus 369 y~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ 445 (803)
|+.||+||+||.+||||++++||||| |.|+|+|+.+|..+.+. +|++|+|.|++++++
T Consensus 470 LaaADVfVlPS~~EGfp~vlLEAMA~-------------------GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ 530 (578)
T PRK15490 470 LQKMNVFILFSRYEGLPNVLIEAQMV-------------------GVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQ 530 (578)
T ss_pred HHhCCEEEEcccccCccHHHHHHHHh-------------------CCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHH
Confidence 99999999999999999999999999 67899999999999882 489999999999988
Q ss_pred HHHHHhCCC--HHHHHHHHHHhhccc-ccCCHHHHHHHHHHHHHH
Q 003682 446 AMDSALGVS--DAEKQMRHEKHYRYV-STHDVAYWARSFLQDLER 487 (803)
Q Consensus 446 ai~~aL~~~--~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~l~~ 487 (803)
++..+..+. ...+....+..++++ ..+++...++++++.++.
T Consensus 531 ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 531 ACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 875433322 122333445566666 459999999888876654
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.1e-21 Score=218.50 Aligned_cols=275 Identities=17% Similarity=0.115 Sum_probs=189.9
Q ss_pred CCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCCh---hhhhc---CCCcHHH--------HH-HHhcCCEEeccC
Q 003682 139 DDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS---EIYRT---LPIRDEL--------LR-ALLNADLIGFHT 203 (803)
Q Consensus 139 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~---~~~~~---lp~~~~i--------l~-~ll~~dligf~~ 203 (803)
+-|+|++|......+++.+..+..+.|+.+..|--+|.. ++... .+....+ .+ .+-.||.|-..+
T Consensus 173 ~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~Ii~~s 252 (475)
T cd03813 173 KADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADRITTLY 252 (475)
T ss_pred CCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCEEEecC
Confidence 359999998766666666655566889999999655421 12111 0000000 00 112345444433
Q ss_pred HhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecC
Q 003682 204 FDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDD 283 (803)
Q Consensus 204 ~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~R 283 (803)
.... ..+. .++....++.++|+|||.+.|.+... . ....++++|+++||
T Consensus 253 ~~~~-~~~~-------------------~~g~~~~ki~vIpNgid~~~f~~~~~-----~------~~~~~~~~i~~vGr 301 (475)
T cd03813 253 EGNR-ERQI-------------------EDGADPEKIRVIPNGIDPERFAPARR-----A------RPEKEPPVVGLIGR 301 (475)
T ss_pred HHHH-HHHH-------------------HcCCCHHHeEEeCCCcCHHHcCCccc-----c------ccCCCCcEEEEEec
Confidence 3221 1111 11122346778999999998863211 0 11246789999999
Q ss_pred cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHH
Q 003682 284 MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFY 363 (803)
Q Consensus 284 ld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~ 363 (803)
+.+.||+..+++|++.+.++.|+++ |+++|.+. +..++.+++++++.+.+ ..+.+.|.| .+
T Consensus 302 l~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g~-----~~~~~~~e~~~li~~l~-------l~~~V~f~G---~~ 362 (475)
T cd03813 302 VVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPTD-----EDPEYAEECRELVESLG-------LEDNVKFTG---FQ 362 (475)
T ss_pred cccccCHHHHHHHHHHHHHhCCCeE----EEEECCCC-----cChHHHHHHHHHHHHhC-------CCCeEEEcC---Cc
Confidence 9999999999999999998888765 88887432 22345566666666643 333456666 56
Q ss_pred HHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC-C--------CCce
Q 003682 364 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S--------GAIR 434 (803)
Q Consensus 364 ~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~--------~~~l 434 (803)
++..+|+.||++|+||..||||++++||||| |.|+|+|+.+|+.+.+ + .|++
T Consensus 363 ~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~-------------------G~PVVatd~g~~~elv~~~~~~~~g~~G~l 423 (475)
T cd03813 363 NVKEYLPKLDVLVLTSISEGQPLVILEAMAA-------------------GIPVVATDVGSCRELIEGADDEALGPAGEV 423 (475)
T ss_pred cHHHHHHhCCEEEeCchhhcCChHHHHHHHc-------------------CCCEEECCCCChHHHhcCCcccccCCceEE
Confidence 8999999999999999999999999999999 6789999999998888 3 4899
Q ss_pred eCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccccc-CCHHHHHHHHHH
Q 003682 435 VNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSFLQ 483 (803)
Q Consensus 435 vnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~ 483 (803)
++|.|++++|++|.++++. ++.+....+..++++.+ +++...++++.+
T Consensus 424 v~~~d~~~la~ai~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 424 VPPADPEALARAILRLLKD-PELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred ECCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999999999999984 45556666666666655 576777776654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.8e-21 Score=211.46 Aligned_cols=237 Identities=16% Similarity=0.155 Sum_probs=149.1
Q ss_pred hcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHH-HHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CC--cEEecCcEEEE
Q 003682 529 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAIL-DNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GL--GIAAEHGYFVR 604 (803)
Q Consensus 529 ~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL-~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l--~lia~nGa~i~ 604 (803)
.+...+|++||||||+++. .+..++.....+| +++ .++|+.++++|||+...+.++.+.++ .. -+++.||+.|.
T Consensus 6 ~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~-~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~ 83 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAE-YRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIA 83 (413)
T ss_pred CCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHh-hcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEE
Confidence 4567899999999999831 1446776666666 776 88999999999999988888876552 12 26788999998
Q ss_pred eCCceeEEeecCCCCccHHHHHH---------HHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHH
Q 003682 605 PNYGVDWETCVSVPDFSWKQIAE---------PVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESV 675 (803)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~---------~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~ 675 (803)
..+... .+..|...+. +.+..|.........+.+...+.+.... ....++.+.+.+.
T Consensus 84 ~~~~~~-------~d~~w~~~l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~-------~~~~~~~~~l~~~ 149 (413)
T PLN02382 84 YGESMV-------PDHGWVEYLNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDK-------KKAQEVIKELSER 149 (413)
T ss_pred eCCCCc-------cChhHHHHHhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEech-------HHhHHHHHHHHHH
Confidence 754221 1222322221 1111111111111112222233333221 1223344555555
Q ss_pred hcCCC---eEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcc-hhcCCCCCCCCcce
Q 003682 676 LANEP---VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK-SAAAGPSLSPVAEV 751 (803)
Q Consensus 676 l~~~~---~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag-~s~a~~~~~~~~~~ 751 (803)
+...+ ..+.++..++||+|+++|||.|+++|++++...|++++++++|||+.||++||+.+| .+++|+|+.+..+-
T Consensus 150 ~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~ 229 (413)
T PLN02382 150 LEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQ 229 (413)
T ss_pred HHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHH
Confidence 54322 344678899999999999999999999997555789999999999999999999999 67666554432211
Q ss_pred EEEEeCCCCccceeEe---CCHhHHHHHHHHHHHh
Q 003682 752 FACTVGQKPSKAKYYL---DDTAEILRMLLGLAEA 783 (803)
Q Consensus 752 ~~v~vG~~~s~A~~~v---~~~~ev~~~L~~l~~~ 783 (803)
.+-. .....|++++ ++.+++.+.|+++.-.
T Consensus 230 ~a~~--~~~~~~~~~~a~~~~~~GI~~al~~f~l~ 262 (413)
T PLN02382 230 WYAE--NAKDNPKIIHATERCAAGIIQAIGHFNLG 262 (413)
T ss_pred HHHh--hccCCCcEEEcCCCCccHHHHHHHHhCCC
Confidence 0000 0112235543 3578999999988754
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.8e-20 Score=192.03 Aligned_cols=215 Identities=17% Similarity=0.145 Sum_probs=136.3
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC-C-C-CcEEecCcEEEEeC
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC-E-G-LGIAAEHGYFVRPN 606 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l-~-~-l~lia~nGa~i~~~ 606 (803)
.+++++++|+||||++ +++.+++++.++|++| ++. +.|++||||+...+.+.++.. . . ..++++||+++...
T Consensus 5 ~~~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l-~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~ 79 (245)
T PLN02423 5 KPGVIALFDVDGTLTA---PRKEATPEMLEFMKEL-RKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKD 79 (245)
T ss_pred ccceEEEEeccCCCcC---CCCcCCHHHHHHHHHH-HhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeC
Confidence 3456777999999999 7888999999999999 665 999999999999998877643 1 1 36889999999876
Q ss_pred CceeEEeecCC-CCccHHHHHHHHHHHHhh-----cCCCceEeeccceEEEe--eccCCCc---------cchhhHHHHH
Q 003682 607 YGVDWETCVSV-PDFSWKQIAEPVMKLYTE-----TTDGSTIETKESALVWN--FQYADPD---------FGSCQAKELL 669 (803)
Q Consensus 607 ~~~~~~~~~~~-~~~~~~~~~~~i~~~y~~-----~~~g~~ie~k~~~~~~~--~~~~d~~---------~~~~~~~el~ 669 (803)
+...+...++. .+.+....+.+..+.+.. ...+.+++..+...... +.++... .-.....++.
T Consensus 80 g~~i~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 159 (245)
T PLN02423 80 GKLIGTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMV 159 (245)
T ss_pred CEEEEEecccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHHHH
Confidence 65554432211 111111111111111110 11233443322111111 1111000 0011223444
Q ss_pred HHHHHHhcCCCe-EEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeC----ChhhHHHHHHcchhcCCCC
Q 003682 670 DHLESVLANEPV-SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVIKSAAAGPS 744 (803)
Q Consensus 670 ~~l~~~l~~~~~-~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD----~~NDi~Mf~~ag~s~a~~~ 744 (803)
+.+.+.+.+..+ ...+|..++||+|+|+|||.||+.|+ ++++++|||| +.||++|++.-|.
T Consensus 160 ~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~~~------ 225 (245)
T PLN02423 160 SVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESERT------ 225 (245)
T ss_pred HHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCCCc------
Confidence 555555544222 23445589999999999999999996 5899999999 8999999997654
Q ss_pred CCCCcceEEEEeCCCCccceeEeCCHhHHHHHHHHHH
Q 003682 745 LSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLA 781 (803)
Q Consensus 745 ~~~~~~~~~v~vG~~~s~A~~~v~~~~ev~~~L~~l~ 781 (803)
.+.+ |.+++++.++|+++.
T Consensus 226 -------~~~~-----------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 226 -------IGHT-----------VTSPDDTREQCTALF 244 (245)
T ss_pred -------ceEE-----------eCCHHHHHHHHHHhc
Confidence 1222 567999999988763
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-20 Score=206.23 Aligned_cols=274 Identities=18% Similarity=0.119 Sum_probs=189.9
Q ss_pred HHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCC----CChhhhhcCCCcHHHHH-HHhcCCEEeccCHhh
Q 003682 132 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPF----PSSEIYRTLPIRDELLR-ALLNADLIGFHTFDY 206 (803)
Q Consensus 132 i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pf----P~~~~~~~lp~~~~il~-~ll~~dligf~~~~~ 206 (803)
+++..+| |+|++|+....+....+.+ ..+.|+.+.+|... +.............+.+ .+-.+|.+-+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 5566777 8999997764444333333 34678888888422 11111000000111222 234578887777654
Q ss_pred HHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCccc
Q 003682 207 ARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDI 286 (803)
Q Consensus 207 ~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~ 286 (803)
.+.+... |. ...++.++|+|+|.+.|.+... ..+++.++++||+.+
T Consensus 154 ~~~~~~~-----~~---------------~~~~i~vi~~g~d~~~~~~~~~--------------~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----GF---------------PPEKVHVHPIGVDTAKFTPATP--------------ARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----CC---------------CHHHeEEecCCCCHHhcCCCCC--------------CCCCcEEEEEEeecc
Confidence 4444321 11 1235667899999887752110 134568999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHH
Q 003682 287 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 366 (803)
Q Consensus 287 ~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~ 366 (803)
.||+..+++|+..+.+++|+++ |+++|. ++.. +++++++.+ .+..+.+.+.|.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~----~~~~~~~~~-------~~~~~~v~~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPLL----AALEALARA-------LGLGGRVTFLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chHH----HHHHHHHHH-------cCCCCeEEECCCCCHHHHH
Confidence 9999999999999988888665 888873 2322 334444443 2233456778899999999
Q ss_pred HHHHhcccceeccc------ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC---CCCceeCC
Q 003682 367 AYYVIAECCLVTAV------RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL---SGAIRVNP 437 (803)
Q Consensus 367 aly~~Adv~v~~S~------~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l---~~~~lvnP 437 (803)
.+|+.||++++||. .||||++++|||+| |.|+|+|+.+|..+.+ .+|++++|
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~-------------------G~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQAS-------------------GVPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHc-------------------CCCEEEeCCCCchhheecCCeeEEECC
Confidence 99999999999997 59999999999999 6789999999998877 24899999
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHH
Q 003682 438 WNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFL 482 (803)
Q Consensus 438 ~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 482 (803)
.|+++++++|.++++. ++.+.......++++ ..+++..+++++.
T Consensus 321 ~d~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 321 GDVAALAAALGRLLAD-PDLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 9999999999999884 444555556666666 4588888887764
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.86 E-value=6e-20 Score=208.01 Aligned_cols=208 Identities=12% Similarity=0.134 Sum_probs=157.4
Q ss_pred EEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 003682 239 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIAN 318 (803)
Q Consensus 239 ~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~ 318 (803)
++.++++|+|.+.+... +. ....++++++++||+.+.||+..+|+||++++++.++-..++.|+++|.
T Consensus 244 ~i~vvyp~vd~~~~~~~---~~---------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~ 311 (463)
T PLN02949 244 RIKRVYPPCDTSGLQAL---PL---------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGS 311 (463)
T ss_pred CeEEEcCCCCHHHcccC---Cc---------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeC
Confidence 45678889998766311 10 0013457899999999999999999999998875443222455998885
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCC
Q 003682 319 PARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGN 398 (803)
Q Consensus 319 ~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~ 398 (803)
.. .++..++.+++++++.+ .+....+.|.+.++.+++.++|+.||+++.||..||||++++|||||
T Consensus 312 ~~---~~~~~~~~~eL~~la~~-------l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~---- 377 (463)
T PLN02949 312 CR---NKEDEERLQKLKDRAKE-------LGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAA---- 377 (463)
T ss_pred CC---CcccHHHHHHHHHHHHH-------cCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHc----
Confidence 42 12222344555555555 23334566778899999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCceEEecccccccccC-C------CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccccc
Q 003682 399 EKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S------GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST 471 (803)
Q Consensus 399 ~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~------~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~ 471 (803)
|.|+|++..+|..+.+ . .|++++ |++++|++|.++++++++++....++.++.+.+
T Consensus 378 ---------------G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~ 440 (463)
T PLN02949 378 ---------------GAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANR 440 (463)
T ss_pred ---------------CCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 6689999999875433 2 277774 899999999999998888777777777788888
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 003682 472 HDVAYWARSFLQDLERAC 489 (803)
Q Consensus 472 ~~~~~W~~~~l~~l~~~~ 489 (803)
++....++++++.+....
T Consensus 441 FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 441 FSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred cCHHHHHHHHHHHHHHHH
Confidence 999999999988877653
|
|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=3e-20 Score=205.06 Aligned_cols=265 Identities=14% Similarity=0.090 Sum_probs=178.6
Q ss_pred HHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHH-HHHhcCCEEeccCHhhHHHH
Q 003682 132 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELL-RALLNADLIGFHTFDYARHF 210 (803)
Q Consensus 132 i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il-~~ll~~dligf~~~~~~~~F 210 (803)
+++..+| |+|++|..+...++.++.+......+.+..|..+...+.+........+. ..+..+|.+-..+....+.+
T Consensus 75 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~ 152 (358)
T cd03812 75 LIKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWL 152 (358)
T ss_pred HHhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHH
Confidence 3445566 99999999877777777666555566777887665443322111100011 11223565555444333332
Q ss_pred HHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh--CCCEEEEeecCccccc
Q 003682 211 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDIFK 288 (803)
Q Consensus 211 l~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~--~~~~iil~V~Rld~~K 288 (803)
... ....++.++|+|+|.+.|... +...+. .++.. .++++|+++||+++.|
T Consensus 153 ~~~---------------------~~~~~~~vi~ngvd~~~~~~~---~~~~~~---~~~~~~~~~~~~i~~vGr~~~~K 205 (358)
T cd03812 153 FGK---------------------VKNKKFKVIPNGIDLEKFIFN---EEIRKK---RRELGILEDKFVIGHVGRFSEQK 205 (358)
T ss_pred HhC---------------------CCcccEEEEeccCcHHHcCCC---chhhhH---HHHcCCCCCCEEEEEEecccccc
Confidence 210 112367789999999877532 111111 11211 5688999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHH
Q 003682 289 GISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAY 368 (803)
Q Consensus 289 gi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~al 368 (803)
|+..+++|+..+.+++|+++ ++++|. ++..+.+++.++ + .+..+.+.+.|. .+++..+
T Consensus 206 g~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~~~~~~~----~-------~~~~~~v~~~g~--~~~~~~~ 263 (358)
T cd03812 206 NHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEEIKKKVK----E-------LGLEDKVIFLGV--RNDVPEL 263 (358)
T ss_pred ChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHHHHHHH----h-------cCCCCcEEEecc--cCCHHHH
Confidence 99999999999999888765 888873 333334444333 2 233344555655 6789999
Q ss_pred HHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCCC--CceeCCCCHHHHHHH
Q 003682 369 YVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG--AIRVNPWNIDAVAEA 446 (803)
Q Consensus 369 y~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~--~~lvnP~d~~~~a~a 446 (803)
|+.||++|+||..||||++++||||| |.|+|+|+.+|..+.+.+ +++..+.+++++|++
T Consensus 264 ~~~adi~v~ps~~E~~~~~~lEAma~-------------------G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~ 324 (358)
T cd03812 264 LQAMDVFLFPSLYEGLPLVLIEAQAS-------------------GLPCILSDTITKEVDLTDLVKFLSLDESPEIWAEE 324 (358)
T ss_pred HHhcCEEEecccccCCCHHHHHHHHh-------------------CCCEEEEcCCchhhhhccCccEEeCCCCHHHHHHH
Confidence 99999999999999999999999999 678999999999988843 555656678999999
Q ss_pred HHHHhCCCHHHHHHHHHHhh
Q 003682 447 MDSALGVSDAEKQMRHEKHY 466 (803)
Q Consensus 447 i~~aL~~~~~er~~r~~~~~ 466 (803)
|.++++.+..++..+.....
T Consensus 325 i~~l~~~~~~~~~~~~~~~~ 344 (358)
T cd03812 325 ILKLKSEDRRERSSESIKKK 344 (358)
T ss_pred HHHHHhCcchhhhhhhhhhc
Confidence 99999988766554443333
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-20 Score=221.16 Aligned_cols=282 Identities=14% Similarity=0.117 Sum_probs=182.4
Q ss_pred HhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEE-EEecCCCC---hhhhhcCCCcHHHHHHHhcCCEEeccC-HhhH
Q 003682 133 MEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGF-FLHSPFPS---SEIYRTLPIRDELLRALLNADLIGFHT-FDYA 207 (803)
Q Consensus 133 ~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~-flH~pfP~---~~~~~~lp~~~~il~~ll~~dligf~~-~~~~ 207 (803)
++..+| |+|++|.+.-..+..+..+.. .+|+.+ .+|. +|. ++.++. ....+.+.+..++.+.+.+ .++.
T Consensus 396 lk~~kp--DIVH~h~~~a~~lg~lAa~~~-gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~ 469 (694)
T PRK15179 396 MRSSVP--SVVHIWQDGSIFACALAALLA-GVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFA 469 (694)
T ss_pred HHHcCC--cEEEEeCCcHHHHHHHHHHHc-CCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHH
Confidence 344567 999999998777766665543 455544 4564 222 111110 0011222333333332222 1222
Q ss_pred -HHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh-CCCEEEEeecCcc
Q 003682 208 -RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMD 285 (803)
Q Consensus 208 -~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~-~~~~iil~V~Rld 285 (803)
+.+.. .++ ....++.++|+|||++.|.+ .+........++... .+.++|++|||++
T Consensus 470 ~~~l~~----~~g---------------~~~~kI~VI~NGVd~~~f~~---~~~~~~~~~~~~~~~~~~~~vIg~VGRL~ 527 (694)
T PRK15179 470 AHRYAD----WLG---------------VDERRIPVVYNGLAPLKSVQ---DDACTAMMAQFDARTSDARFTVGTVMRVD 527 (694)
T ss_pred HHHHHH----HcC---------------CChhHEEEECCCcCHHhcCC---CchhhHHHHhhccccCCCCeEEEEEEeCC
Confidence 22221 111 12246788999999988752 121111112222222 3467899999999
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHH
Q 003682 286 IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYER 365 (803)
Q Consensus 286 ~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l 365 (803)
+.||+..+++||.++++++|+++ |+++|.+ +.. +++++++.+ .+....+.|.|.. +++
T Consensus 528 ~~KG~~~LI~A~a~l~~~~p~~~----LvIvG~G-----~~~----~~L~~l~~~-------lgL~~~V~flG~~--~dv 585 (694)
T PRK15179 528 DNKRPFLWVEAAQRFAASHPKVR----FIMVGGG-----PLL----ESVREFAQR-------LGMGERILFTGLS--RRV 585 (694)
T ss_pred ccCCHHHHHHHHHHHHHHCcCeE----EEEEccC-----cch----HHHHHHHHH-------cCCCCcEEEcCCc--chH
Confidence 99999999999999999999765 8888843 333 334444444 3344567777765 479
Q ss_pred HHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCH--
Q 003682 366 IAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNI-- 440 (803)
Q Consensus 366 ~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~-- 440 (803)
..+|+.||+||+||.+||||++++|||+| |.|||+|+.+|..+.+. +|++|+|.|.
T Consensus 586 ~~ll~aaDv~VlpS~~Egfp~vlLEAMA~-------------------G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~ 646 (694)
T PRK15179 586 GYWLTQFNAFLLLSRFEGLPNVLIEAQFS-------------------GVPVVTTLAGGAGEAVQEGVTGLTLPADTVTA 646 (694)
T ss_pred HHHHHhcCEEEeccccccchHHHHHHHHc-------------------CCeEEEECCCChHHHccCCCCEEEeCCCCCCh
Confidence 99999999999999999999999999999 67899999999999883 4899998875
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHHHH
Q 003682 441 DAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFLQD 484 (803)
Q Consensus 441 ~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l~~ 484 (803)
++++++|.+++....... ...+..++++ +.+++...++++++.
T Consensus 647 ~~La~aL~~ll~~l~~~~-~l~~~ar~~a~~~FS~~~~~~~~~~l 690 (694)
T PRK15179 647 PDVAEALARIHDMCAADP-GIARKAADWASARFSLNQMIASTVRC 690 (694)
T ss_pred HHHHHHHHHHHhChhccH-HHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 689999988886543222 2233455555 468888887777654
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-19 Score=200.76 Aligned_cols=287 Identities=15% Similarity=0.126 Sum_probs=194.4
Q ss_pred HHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCC---CCeEEEEEecCCCChhhhhcCCCcH-HHHHHHhcCCEEe
Q 003682 125 NKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFN---RVKLGFFLHSPFPSSEIYRTLPIRD-ELLRALLNADLIG 200 (803)
Q Consensus 125 N~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~---~~~i~~flH~pfP~~~~~~~lp~~~-~il~~ll~~dlig 200 (803)
++.+.+.+ +..+| |+|++|.+....++.++..+.. +.++.+.+|-.-. .....-+... -+...+-.+|.+.
T Consensus 73 ~~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~--~~~~~~~~~~~~~~~~~~~~d~ii 147 (371)
T cd04962 73 ASKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDI--TLVGQDPSFQPATRFSIEKSDGVT 147 (371)
T ss_pred HHHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCcc--ccccccccchHHHHHHHhhCCEEE
Confidence 34455444 45577 8999998776666666654322 6788888883211 0011111112 2233456789888
Q ss_pred ccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEE
Q 003682 201 FHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIV 277 (803)
Q Consensus 201 f~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~i 277 (803)
..+....+.+...+ + ...++.++|+|+|...|.... . ...++++ .++++
T Consensus 148 ~~s~~~~~~~~~~~----~----------------~~~~i~vi~n~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~ 199 (371)
T cd04962 148 AVSESLRQETYELF----D----------------ITKEIEVIPNFVDEDRFRPKP-----D---EALKRRLGAPEGEKV 199 (371)
T ss_pred EcCHHHHHHHHHhc----C----------------CcCCEEEecCCcCHhhcCCCc-----h---HHHHHhcCCCCCCeE
Confidence 88877665554311 1 112467889999987764211 1 1122333 46789
Q ss_pred EEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEec
Q 003682 278 MLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLID 357 (803)
Q Consensus 278 il~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~ 357 (803)
++++||+.+.||+..+++|++++.++ +++ .|+++|.+ ++...+++. +.+ .+..+.+.+.
T Consensus 200 il~~g~l~~~K~~~~li~a~~~l~~~-~~~----~l~i~G~g-----~~~~~~~~~----~~~-------~~~~~~v~~~ 258 (371)
T cd04962 200 LIHISNFRPVKRIDDVIRIFAKVRKE-VPA----RLLLVGDG-----PERSPAERL----ARE-------LGLQDDVLFL 258 (371)
T ss_pred EEEecccccccCHHHHHHHHHHHHhc-CCc----eEEEEcCC-----cCHHHHHHH----HHH-------cCCCceEEEe
Confidence 99999999999999999999988665 333 37777743 333333333 333 2222334455
Q ss_pred CCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCce
Q 003682 358 TPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIR 434 (803)
Q Consensus 358 ~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~l 434 (803)
|.. +++..+|+.||++++||..||||++++|||+| |.|+|+|+.+|..+.+. .|++
T Consensus 259 g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~-------------------g~PvI~s~~~~~~e~i~~~~~G~~ 317 (371)
T cd04962 259 GKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMAC-------------------GVPVVASNAGGIPEVVKHGETGFL 317 (371)
T ss_pred cCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHc-------------------CCCEEEeCCCCchhhhcCCCceEE
Confidence 543 57999999999999999999999999999999 67899999999988883 4899
Q ss_pred eCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcc-cccCCHHHHHHHHHHHHHH
Q 003682 435 VNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRY-VSTHDVAYWARSFLQDLER 487 (803)
Q Consensus 435 vnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~-v~~~~~~~W~~~~l~~l~~ 487 (803)
++|.|+++++++|.+++.. ++.+....+..++. ...+++...++++++.+++
T Consensus 318 ~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 318 VDVGDVEAMAEYALSLLED-DELWQEFSRAARNRAAERFDSERIVPQYEALYRR 370 (371)
T ss_pred cCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 9999999999999999974 44555555556665 5668988888888776543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.2e-20 Score=202.89 Aligned_cols=268 Identities=17% Similarity=0.221 Sum_probs=188.7
Q ss_pred HhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHH
Q 003682 133 MEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLS 212 (803)
Q Consensus 133 ~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~ 212 (803)
++..+| |+|++|..+...+..++.+ ..+.|+.+.+|-.++....+ .. .+..+|.+-+.+....+.+.
T Consensus 74 ~~~~~~--dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~------~~---~~~~~~~vi~~s~~~~~~~~- 140 (355)
T cd03819 74 IREEKV--DIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFRY------NA---IMARGDRVIAVSNFIADHIR- 140 (355)
T ss_pred HHHcCC--CEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHHH------HH---HHHhcCEEEEeCHHHHHHHH-
Confidence 345566 9999998776555544443 34789999999776544311 12 23458888776654444333
Q ss_pred HHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCcccccC
Q 003682 213 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKG 289 (803)
Q Consensus 213 ~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~~Kg 289 (803)
...+. ...++.++|+|+|.+.|....... .....+++++ .++++|+++||+.+.||
T Consensus 141 ---~~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg 199 (355)
T cd03819 141 ---ENYGV---------------DPDRIRVIPRGVDLDRFDPGAVPP---ERILALAREWPLPKGKPVILLPGRLTRWKG 199 (355)
T ss_pred ---HhcCC---------------ChhhEEEecCCccccccCccccch---HHHHHHHHHcCCCCCceEEEEeeccccccC
Confidence 11221 123567789999998875432211 1122244444 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHH
Q 003682 290 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 369 (803)
Q Consensus 290 i~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly 369 (803)
+..+++|+..+.+++|+++ |+++|.+. ..+.+.+.+.+.+.+. +..+.+.+.|. .+++..+|
T Consensus 200 ~~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~~-------~~~~~v~~~g~--~~~~~~~l 261 (355)
T cd03819 200 QEVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKRL-------GLQDRVTFVGH--CSDMPAAY 261 (355)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHHc-------CCcceEEEcCC--cccHHHHH
Confidence 9999999999988766554 88888543 2223444444444432 22233455555 67899999
Q ss_pred Hhcccceecc-cccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHH
Q 003682 370 VIAECCLVTA-VRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAE 445 (803)
Q Consensus 370 ~~Adv~v~~S-~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ 445 (803)
+.||++++|| ..||||++++||||| |.|+|+|+.+|..+.+. +|++++|.|++++++
T Consensus 262 ~~ad~~i~ps~~~e~~~~~l~EA~a~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~ 322 (355)
T cd03819 262 ALADIVVSASTEPEAFGRTAVEAQAM-------------------GRPVIASDHGGARETVRPGETGLLVPPGDAEALAQ 322 (355)
T ss_pred HhCCEEEecCCCCCCCchHHHHHHhc-------------------CCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHH
Confidence 9999999999 789999999999999 67899999999888773 489999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHhhccccc
Q 003682 446 AMDSALGVSDAEKQMRHEKHYRYVST 471 (803)
Q Consensus 446 ai~~aL~~~~~er~~r~~~~~~~v~~ 471 (803)
+|..++..+++++....++.++++.+
T Consensus 323 ~i~~~~~~~~~~~~~~~~~a~~~~~~ 348 (355)
T cd03819 323 ALDQILSLLPEGRAKMFAKARMCVET 348 (355)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 99988888888887777777766644
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.2e-20 Score=204.24 Aligned_cols=203 Identities=14% Similarity=0.110 Sum_probs=149.8
Q ss_pred eEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhC---CCCCCcEEEEEEe
Q 003682 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQN---PSKRGKIVLVQIA 317 (803)
Q Consensus 241 ~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~---p~~~~~v~lv~i~ 317 (803)
.++|+|+|.+.|.+....+ ..+.....+++.+|+++||+.+.||+..+++|++++.+++ |++ .|+++|
T Consensus 182 ~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~----~l~i~G 252 (392)
T cd03805 182 EVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNV----RLVIAG 252 (392)
T ss_pred ceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCe----EEEEEc
Confidence 4789999998886422111 0111112257789999999999999999999999998887 554 488888
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecC
Q 003682 318 NPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 318 ~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~ 397 (803)
.+... ..+..++.+++++++.+. .+....+.|.|.++.+++..+|+.||++++||..||||++++|||||
T Consensus 253 ~~~~~-~~~~~~~~~~l~~~~~~~------~~l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~--- 322 (392)
T cd03805 253 GYDPR-VAENVEYLEELQRLAEEL------LLLEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYA--- 322 (392)
T ss_pred CCCCC-CchhHHHHHHHHHHHHHh------cCCCceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHc---
Confidence 54321 122234455555555441 12234566778999999999999999999999999999999999999
Q ss_pred CcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccCC
Q 003682 398 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STHD 473 (803)
Q Consensus 398 ~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~~ 473 (803)
|.|+|+|+.+|..+.+. +|++++| |++++|++|.++++.+. .+....+..++++ ..++
T Consensus 323 ----------------G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s 384 (392)
T cd03805 323 ----------------GKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPD-LADRMGAAGRKRVKEKFS 384 (392)
T ss_pred ----------------CCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChH-HHHHHHHHHHHHHHHhcC
Confidence 67899999999888883 3788877 99999999999998654 4455555566655 4578
Q ss_pred HHHHHHH
Q 003682 474 VAYWARS 480 (803)
Q Consensus 474 ~~~W~~~ 480 (803)
+..++++
T Consensus 385 ~~~~~~~ 391 (392)
T cd03805 385 TEAFAER 391 (392)
T ss_pred HHHHhhh
Confidence 7777654
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-20 Score=209.82 Aligned_cols=203 Identities=14% Similarity=0.061 Sum_probs=134.5
Q ss_pred hcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeCC
Q 003682 529 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNY 607 (803)
Q Consensus 529 ~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~~ 607 (803)
.+.+|+|++|+||||++ .+..+++.++++|++| +++|+.|++||||+...+..++..+. ..++|++||+.|+.++
T Consensus 413 ~~~~KLIfsDLDGTLLd---~d~~i~~~t~eAL~~L-~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~ 488 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLN---PLTYSYSTALDALRLL-KDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPK 488 (694)
T ss_pred CceeeEEEEECcCCCcC---CCCccCHHHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECC
Confidence 46689999999999999 6667788999999998 89999999999999999999987763 3469999999999865
Q ss_pred ce-------------eEEeecCCCCccHHHHHHHHHHHHhhcCC----------CceEeeccceEEEe----eccC----
Q 003682 608 GV-------------DWETCVSVPDFSWKQIAEPVMKLYTETTD----------GSTIETKESALVWN----FQYA---- 656 (803)
Q Consensus 608 ~~-------------~~~~~~~~~~~~~~~~~~~i~~~y~~~~~----------g~~ie~k~~~~~~~----~~~~---- 656 (803)
+. .+.... ..+ .+.+.++++...+... ..++.... ..... +...
T Consensus 489 ~~~~~~~~~~~~~~~~iI~~~-~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~-d~~~~ei~~~TgL~~~~ 563 (694)
T PRK14502 489 DYFRLPFAYDRVAGNYLVIEL-GMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFG-DMSVEDVSRLTDLNLKQ 563 (694)
T ss_pred CcccccccccccCCCeEEEEc-CCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCC-cccHHHHHHhhCCCHHH
Confidence 41 010000 111 1223333332222110 11111110 00000 0000
Q ss_pred ----C-----CccchhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEE--eC
Q 003682 657 ----D-----PDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCI--GD 725 (803)
Q Consensus 657 ----d-----~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~--GD 725 (803)
. ..+-.....+.++.+.+.+......+..++.++||+ +++|||.|++++++.+ +++.+++++| ||
T Consensus 564 a~~a~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~---gI~~~eViafalGD 639 (694)
T PRK14502 564 AELAKQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF---RLNFGNIHTFGLGD 639 (694)
T ss_pred HHHHhhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh---CCCccceEEEEcCC
Confidence 0 000000012234444444544456666799999999 5999999999999999 9999999999 99
Q ss_pred ChhhHHHHHHcchhcCCCC
Q 003682 726 DRSDEDMFEVIKSAAAGPS 744 (803)
Q Consensus 726 ~~NDi~Mf~~ag~s~a~~~ 744 (803)
+.||++||+.+|.+++|++
T Consensus 640 s~NDisMLe~Ag~gVAM~~ 658 (694)
T PRK14502 640 SENDYSMLETVDSPILVQR 658 (694)
T ss_pred cHhhHHHHHhCCceEEEcC
Confidence 9999999999998766654
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-19 Score=201.87 Aligned_cols=282 Identities=16% Similarity=0.166 Sum_probs=191.2
Q ss_pred CeEEEeCccccc-hHHHHHhhCCCCeEEEEEecCCCChhhhhc-CC--CcH----HHHH-HHhcCCEEeccCHhhHHHHH
Q 003682 141 DFVWVHDYHLMV-LPTFLRKRFNRVKLGFFLHSPFPSSEIYRT-LP--IRD----ELLR-ALLNADLIGFHTFDYARHFL 211 (803)
Q Consensus 141 d~iwihDyhl~l-lp~~lr~~~~~~~i~~flH~pfP~~~~~~~-lp--~~~----~il~-~ll~~dligf~~~~~~~~Fl 211 (803)
|+|++|...+.. ...++-.+..+.|+.+..|.-||..-.-.. .+ ... .+.+ .+-.+|.|...+....+.+.
T Consensus 108 Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~ 187 (412)
T PRK10307 108 DRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAR 187 (412)
T ss_pred CEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHH
Confidence 999999766543 233333344456788877866653311100 10 000 1111 13357888777776665543
Q ss_pred HHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCccccc
Q 003682 212 SCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFK 288 (803)
Q Consensus 212 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~~K 288 (803)
. .+ ....++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.|
T Consensus 188 ~-----~~---------------~~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 188 E-----KG---------------VAAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred H-----cC---------------CCcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 2 11 12236778999999988863211 1122345555 3568999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHH
Q 003682 289 GISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAY 368 (803)
Q Consensus 289 gi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~al 368 (803)
|+..+++|++++ +++|+ +.|+++|. ++..++++ +++.+ .+... +.|.|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~----~~l~ivG~-----g~~~~~l~----~~~~~-------~~l~~-v~f~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPD----LIFVICGQ-----GGGKARLE----KMAQC-------RGLPN-VHFLPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCC----eEEEEECC-----ChhHHHHH----HHHHH-------cCCCc-eEEeCCCCHHHHHHH
Confidence 999999999876 44555 44888873 34333333 33333 22233 456678999999999
Q ss_pred HHhcccceecccccCCCCC----ceeeeeeecCCcccccccCCCCCCCCCceEEecccccc--cccC-CCCceeCCCCHH
Q 003682 369 YVIAECCLVTAVRDGMNLI----PYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC--SPSL-SGAIRVNPWNID 441 (803)
Q Consensus 369 y~~Adv~v~~S~~EG~~lv----~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~--~~~l-~~~~lvnP~d~~ 441 (803)
|+.||++++||..|+++++ ..||||| |.|+|+|+.+|. .+.+ .+|++++|.|++
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~-------------------G~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~ 361 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLAS-------------------GRNVVATAEPGTELGQLVEGIGVCVEPESVE 361 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHc-------------------CCCEEEEeCCCchHHHHHhCCcEEeCCCCHH
Confidence 9999999999999996654 5899999 677999988774 3545 569999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhhcccc-cCCHHHHHHHHHHHHHHHH
Q 003682 442 AVAEAMDSALGVSDAEKQMRHEKHYRYVS-THDVAYWARSFLQDLERAC 489 (803)
Q Consensus 442 ~~a~ai~~aL~~~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l~~~~ 489 (803)
++|++|.++++++ +++....+..++++. .+++...++++++.+++..
T Consensus 362 ~la~~i~~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 362 ALVAAIAALARQA-LLRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 9999999998754 555666667777765 5899999999988887653
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=199.41 Aligned_cols=275 Identities=20% Similarity=0.187 Sum_probs=197.8
Q ss_pred cCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChh--hhhc---CCCcHHHHHHHhcCCEEeccCHhhHHHH
Q 003682 136 ISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE--IYRT---LPIRDELLRALLNADLIGFHTFDYARHF 210 (803)
Q Consensus 136 ~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~--~~~~---lp~~~~il~~ll~~dligf~~~~~~~~F 210 (803)
.++ |+||+|.+..... +..+.|+.+.+|-.+|... .+.. ...+.-+...+..+|.+.+.+....+.+
T Consensus 84 ~~~--Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~ 155 (365)
T cd03809 84 LGL--DLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDL 155 (365)
T ss_pred cCC--CeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHH
Confidence 455 9999998877766 4567899999997655321 1110 1122333445667888888877666555
Q ss_pred HHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCH
Q 003682 211 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 290 (803)
Q Consensus 211 l~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi 290 (803)
.... +. ...++.++|+|+|...+.... . +. ........++++|+++||+.+.||+
T Consensus 156 ~~~~----~~---------------~~~~~~vi~~~~~~~~~~~~~----~-~~-~~~~~~~~~~~~i~~~G~~~~~K~~ 210 (365)
T cd03809 156 LRYL----GV---------------PPDKIVVIPLGVDPRFRPPPA----E-AE-VLRALYLLPRPYFLYVGTIEPRKNL 210 (365)
T ss_pred HHHh----Cc---------------CHHHEEeeccccCccccCCCc----h-HH-HHHHhcCCCCCeEEEeCCCccccCH
Confidence 5421 11 122566789999988764211 1 11 1112223577899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 370 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~ 370 (803)
..+++|+..+.+++|+.+ |+++|... .........++ + .+..+.+.+.|.++.+++..+|+
T Consensus 211 ~~~l~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~~~~ 271 (365)
T cd03809 211 ERLLEAFARLPAKGPDPK----LVIVGKRG----WLNEELLARLR----E-------LGLGDRVRFLGYVSDEELAALYR 271 (365)
T ss_pred HHHHHHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHHH----H-------cCCCCeEEECCCCChhHHHHHHh
Confidence 999999999998887554 88887433 11112222221 1 23345677888999999999999
Q ss_pred hcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC-CCCceeCCCCHHHHHHHHHH
Q 003682 371 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDS 449 (803)
Q Consensus 371 ~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~~~~lvnP~d~~~~a~ai~~ 449 (803)
.||++++||..||+|++++|||+| |.|+|+|+.+|..+.+ .+|++++|.|.++++++|.+
T Consensus 272 ~~d~~l~ps~~e~~~~~~~Ea~a~-------------------G~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~ 332 (365)
T cd03809 272 GARAFVFPSLYEGFGLPVLEAMAC-------------------GTPVIASNISSLPEVAGDAALYFDPLDPEALAAAIER 332 (365)
T ss_pred hhhhhcccchhccCCCCHHHHhcC-------------------CCcEEecCCCCccceecCceeeeCCCCHHHHHHHHHH
Confidence 999999999999999999999999 6779999998888877 56899999999999999999
Q ss_pred HhCCCHHHHHHHHHHhhcccccCCHHHHHHHHH
Q 003682 450 ALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFL 482 (803)
Q Consensus 450 aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l 482 (803)
+++ +++.+....+..++...+++++.++++++
T Consensus 333 l~~-~~~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 333 LLE-DPALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred Hhc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 986 45555555666667788899999998775
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.4e-19 Score=203.79 Aligned_cols=278 Identities=14% Similarity=0.118 Sum_probs=182.5
Q ss_pred HHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcC--CC--------cHHHHHHH
Q 003682 124 VNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL--PI--------RDELLRAL 193 (803)
Q Consensus 124 vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~l--p~--------~~~il~~l 193 (803)
.=+.|.+.+ . .. +.|+|.++--.... +.++ +..+.+++...+|.-. |... +. -+..++.+
T Consensus 199 l~~~f~~~L-~-~~-~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h-----~~~~~~~~~~~~~~~~y~~~~~~~ 268 (500)
T TIGR02918 199 LIAYFLKQL-N-LT-KKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEH-----FSESATNETYILWNNYYEYQFSNA 268 (500)
T ss_pred HHHHHHHHH-h-CC-CCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhh-----hcCccCcchhHHHHHHHHHHHhch
Confidence 334455554 2 22 34888887555433 3444 5566899999999432 1110 11 11122333
Q ss_pred hcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhC
Q 003682 194 LNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFK 273 (803)
Q Consensus 194 l~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~ 273 (803)
-.+|.+-..|....+........ +.+...++.++|+|++...+. +. ...
T Consensus 269 ~~~D~iI~~S~~~~~~l~~~~~~----------------~~~~~~ki~viP~g~~~~~~~-----~~----------~~r 317 (500)
T TIGR02918 269 DYIDFFITATDIQNQILKNQFKK----------------YYNIEPRIYTIPVGSLDELQY-----PE----------QER 317 (500)
T ss_pred hhCCEEEECCHHHHHHHHHHhhh----------------hcCCCCcEEEEcCCCcccccC-----cc----------ccc
Confidence 34566665555433332221111 112233567889998754332 10 012
Q ss_pred CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003682 274 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 353 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v 353 (803)
.+..|++|||+.+.||+..+++|+.++.+++|+++ |+++|. +++.+ ++++++.+. +....
T Consensus 318 ~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~----l~i~G~-----G~~~~----~l~~~i~~~-------~l~~~ 377 (500)
T TIGR02918 318 KPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELT----FDIYGE-----GGEKQ----KLQKIINEN-------QAQDY 377 (500)
T ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeE----EEEEEC-----chhHH----HHHHHHHHc-------CCCCe
Confidence 34689999999999999999999999999999765 888873 34333 344444442 22344
Q ss_pred EEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccc-cccccCC--
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV-GCSPSLS-- 430 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~-G~~~~l~-- 430 (803)
+.+.|.. ++..+|+.||++|+||.+||||++++||||| |.|+|+|+.. |..+.+.
T Consensus 378 V~f~G~~---~~~~~~~~adv~v~pS~~Egfgl~~lEAma~-------------------G~PVI~~dv~~G~~eiI~~g 435 (500)
T TIGR02918 378 IHLKGHR---NLSEVYKDYELYLSASTSEGFGLTLMEAVGS-------------------GLGMIGFDVNYGNPTFIEDN 435 (500)
T ss_pred EEEcCCC---CHHHHHHhCCEEEEcCccccccHHHHHHHHh-------------------CCCEEEecCCCCCHHHccCC
Confidence 5677654 5788999999999999999999999999999 6789999986 7777773
Q ss_pred -CCceeCC----CC----HHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHH
Q 003682 431 -GAIRVNP----WN----IDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 486 (803)
Q Consensus 431 -~~~lvnP----~d----~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 486 (803)
+|++|++ .| ++++|++|.++++ +..+....+..++..+++++..-++++.+-++
T Consensus 436 ~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 436 KNGYLIPIDEEEDDEDQIITALAEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred CCEEEEeCCccccchhHHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 4899974 33 8899999999994 44566666677777788888888877776554
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.2e-19 Score=198.50 Aligned_cols=270 Identities=13% Similarity=0.096 Sum_probs=187.7
Q ss_pred CCCCeEEEeCccccc-hHHHHHhhCCCCeEEEEEecCCCChhhhhcC--CCcHHHHH-HHhcCCEEeccCHhhHHHHHHH
Q 003682 138 PDDDFVWVHDYHLMV-LPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL--PIRDELLR-ALLNADLIGFHTFDYARHFLSC 213 (803)
Q Consensus 138 ~~~d~iwihDyhl~l-lp~~lr~~~~~~~i~~flH~pfP~~~~~~~l--p~~~~il~-~ll~~dligf~~~~~~~~Fl~~ 213 (803)
++.|+++.|-++... ...++.++....++....|- .+++... +....+.+ .+-.+|.|.+.+....+.+..
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg----~d~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~l~~- 200 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHG----YDLYEDRYPSGYIPLRRYLLSSLDAVFPCSEQGRNYLQK- 200 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEecc----chhhhhhccccchHHHHHHHhcCCEEEECCHHHHHHHHH-
Confidence 334777776555433 33456666655568888883 2222111 11111222 234689998887766554432
Q ss_pred HHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHH
Q 003682 214 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 293 (803)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~ 293 (803)
..+ ....++.++|+|++...+... ....++..|+++||+.+.||+..+
T Consensus 201 ---~~~---------------~~~~ki~vi~~gv~~~~~~~~--------------~~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 201 ---RYP---------------AYKEKIKVSYLGVSDPGIISK--------------PSKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred ---HCC---------------CccccEEEEECCcccccccCC--------------CCCCCCEEEEEeeccccccCHHHH
Confidence 111 112356788999998765321 011356789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh--
Q 003682 294 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI-- 371 (803)
Q Consensus 294 l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~-- 371 (803)
++|+.++.+++|+.. +.++.+|. ++..+++++.+ .+ .+..+.+.+.|.++.+++.++|+.
T Consensus 249 i~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~~l~~~~----~~-------~~~~~~V~f~G~v~~~e~~~~~~~~~ 310 (407)
T cd04946 249 IKALAALAKARPSIK--IKWTHIGG-----GPLEDTLKELA----ES-------KPENISVNFTGELSNSEVYKLYKENP 310 (407)
T ss_pred HHHHHHHHHhCCCce--EEEEEEeC-----chHHHHHHHHH----Hh-------cCCCceEEEecCCChHHHHHHHhhcC
Confidence 999999999988764 66776763 34433444433 22 112245677889999999999986
Q ss_pred cccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCCC---CceeCC-CCHHHHHHHH
Q 003682 372 AECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG---AIRVNP-WNIDAVAEAM 447 (803)
Q Consensus 372 Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~---~~lvnP-~d~~~~a~ai 447 (803)
||+|+.||..||||++++||||| |.|+|+|+.+|..+.+.+ |++++| .|+++++++|
T Consensus 311 ~~v~v~~S~~Eg~p~~llEAma~-------------------G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I 371 (407)
T cd04946 311 VDVFVNLSESEGLPVSIMEAMSF-------------------GIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSL 371 (407)
T ss_pred CCEEEeCCccccccHHHHHHHHc-------------------CCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHH
Confidence 68899999999999999999999 678999999999998843 688876 4899999999
Q ss_pred HHHhCCCHHHHHHHHHHhhccc-ccCCHHHHHHHHH
Q 003682 448 DSALGVSDAEKQMRHEKHYRYV-STHDVAYWARSFL 482 (803)
Q Consensus 448 ~~aL~~~~~er~~r~~~~~~~v-~~~~~~~W~~~~l 482 (803)
.++++ +++.+....++.++++ .++++..+.++|+
T Consensus 372 ~~ll~-~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 372 SKFID-NEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHh-CHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99998 5556666666777666 4588888887775
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-20 Score=211.22 Aligned_cols=187 Identities=11% Similarity=0.024 Sum_probs=127.6
Q ss_pred EEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecC-c-ccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 003682 238 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDD-M-DIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 315 (803)
Q Consensus 238 ~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~R-l-d~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~ 315 (803)
.++.++|+|||++.+..... . ...+ ...++++|++++| + ++.||+..+++|+..+ .+ ++.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~---~----~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAE---L----PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccc---c----cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEE
Confidence 36788999999754321100 0 0001 1246788999999 4 4789999999999875 23 356888
Q ss_pred EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeee
Q 003682 316 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 395 (803)
Q Consensus 316 i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~ 395 (803)
+|.+. +. .. ..+.++....+.+++..+|+.||+||+||..||||+|++|||||
T Consensus 277 vG~g~----~~---~~-------------------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~- 329 (405)
T PRK10125 277 FGKFS----PF---TA-------------------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI- 329 (405)
T ss_pred EcCCC----cc---cc-------------------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc-
Confidence 88432 10 00 01333332346789999999999999999999999999999999
Q ss_pred cCCcccccccCCCCCCCCCceEEecccccccccCC--CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcc-cccC
Q 003682 396 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS--GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRY-VSTH 472 (803)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~--~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~-v~~~ 472 (803)
|.|||+|+.+|+.+.+. +|++|+|.|++++|+++...+... .........++. ...+
T Consensus 330 ------------------G~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~f 389 (405)
T PRK10125 330 ------------------GVPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAY 389 (405)
T ss_pred ------------------CCCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhC
Confidence 67899999999988883 599999999999998653322100 000011223333 4558
Q ss_pred CHHHHHHHHHHHHH
Q 003682 473 DVAYWARSFLQDLE 486 (803)
Q Consensus 473 ~~~~W~~~~l~~l~ 486 (803)
+....++++++-..
T Consensus 390 s~~~~~~~y~~lY~ 403 (405)
T PRK10125 390 SGQQMLEEYVNFYQ 403 (405)
T ss_pred CHHHHHHHHHHHHH
Confidence 88888888876543
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.5e-19 Score=195.01 Aligned_cols=273 Identities=17% Similarity=0.180 Sum_probs=181.0
Q ss_pred CeEEEeCccc-cchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHH------HHHHhcCCEEeccCHhhHHHHHHH
Q 003682 141 DFVWVHDYHL-MVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDEL------LRALLNADLIGFHTFDYARHFLSC 213 (803)
Q Consensus 141 d~iwihDyhl-~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~i------l~~ll~~dligf~~~~~~~~Fl~~ 213 (803)
|+|++|+... ...+.....+..+.++.+..|-.++...... -+.+..+ ...+-.+|.+.+.+.........
T Consensus 89 dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~- 166 (375)
T cd03821 89 DIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPH-KALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR- 166 (375)
T ss_pred CEEEEecccchHHHHHHHHHHHhCCCEEEEcccccccccccc-chhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh-
Confidence 9999998432 2222222222346789999997665433100 0001000 11123355665555332222111
Q ss_pred HHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCcccccCH
Q 003682 214 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGI 290 (803)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~~Kgi 290 (803)
.....++.++|+|+|.+.|.... ... . ++.+ .++++|+++||+++.||+
T Consensus 167 --------------------~~~~~~~~vi~~~~~~~~~~~~~---~~~--~---~~~~~~~~~~~~i~~~G~~~~~K~~ 218 (375)
T cd03821 167 --------------------LGLKAPIAVIPNGVDIPPFAALP---SRG--R---RRKFPILPDKRIILFLGRLHPKKGL 218 (375)
T ss_pred --------------------hCCcccEEEcCCCcChhccCcch---hhh--h---hhhccCCCCCcEEEEEeCcchhcCH
Confidence 11223677899999998875321 110 0 2222 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 370 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~ 370 (803)
..+++|+.++.+++|+++ |+++|... ..+. ..++.++.+ .+..+.+.+.|.++.+++..+|+
T Consensus 219 ~~li~a~~~l~~~~~~~~----l~i~G~~~----~~~~---~~~~~~~~~-------~~~~~~v~~~g~~~~~~~~~~~~ 280 (375)
T cd03821 219 DLLIEAFAKLAERFPDWH----LVIAGPDE----GGYR---AELKQIAAA-------LGLEDRVTFTGMLYGEDKAAALA 280 (375)
T ss_pred HHHHHHHHHhhhhcCCeE----EEEECCCC----cchH---HHHHHHHHh-------cCccceEEEcCCCChHHHHHHHh
Confidence 999999999998888765 88888432 1221 122222222 23345567788999999999999
Q ss_pred hcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC--CCceeCCCCHHHHHHHHH
Q 003682 371 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS--GAIRVNPWNIDAVAEAMD 448 (803)
Q Consensus 371 ~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~--~~~lvnP~d~~~~a~ai~ 448 (803)
.||++++||..||||++++|||+| |.|+|+|+.+|..+.+. .|+++ |.+.++++++|.
T Consensus 281 ~adv~v~ps~~e~~~~~~~Eama~-------------------G~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~ 340 (375)
T cd03821 281 DADLFVLPSHSENFGIVVAEALAC-------------------GTPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAALR 340 (375)
T ss_pred hCCEEEeccccCCCCcHHHHHHhc-------------------CCCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHHH
Confidence 999999999999999999999999 67899999999888883 35555 456699999999
Q ss_pred HHhCCCHHHHHHHHHHhhcc-cccCCHHHHHHHHH
Q 003682 449 SALGVSDAEKQMRHEKHYRY-VSTHDVAYWARSFL 482 (803)
Q Consensus 449 ~aL~~~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 482 (803)
++++++ +++....+..+++ .+.+++...+++++
T Consensus 341 ~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 341 RALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 999976 5555556666666 56688887777664
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.6e-19 Score=195.31 Aligned_cols=283 Identities=18% Similarity=0.172 Sum_probs=189.4
Q ss_pred HhhcCCCCCeEEEeCccccc---hHHHHHh--hCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhH
Q 003682 133 MEVISPDDDFVWVHDYHLMV---LPTFLRK--RFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYA 207 (803)
Q Consensus 133 ~~~~~~~~d~iwihDyhl~l---lp~~lr~--~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~ 207 (803)
++..+| |+|++|+.+-.. ....+.. +..+.|+.+.+|.+.|....+. ...-....+-.+|.|-+.+.+.+
T Consensus 72 ~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---~~~~~~~~~~~~d~ii~~s~~~~ 146 (366)
T cd03822 72 IRLSGP--DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPG---DRALLRLLLRRADAVIVMSSELL 146 (366)
T ss_pred HhhcCC--CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchh---hhHHHHHHHhcCCEEEEeeHHHH
Confidence 344566 899998733111 1111111 2367899999998622221111 11111223446898888764555
Q ss_pred HHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccc
Q 003682 208 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIF 287 (803)
Q Consensus 208 ~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~ 287 (803)
+.+.... ...++.++|+|+|...+.... .. +......++++|+++||+.+.
T Consensus 147 ~~~~~~~---------------------~~~~~~~i~~~~~~~~~~~~~------~~--~~~~~~~~~~~i~~~G~~~~~ 197 (366)
T cd03822 147 RALLLRA---------------------YPEKIAVIPHGVPDPPAEPPE------SL--KALGGLDGRPVLLTFGLLRPY 197 (366)
T ss_pred HHHHhhc---------------------CCCcEEEeCCCCcCcccCCch------hh--HhhcCCCCCeEEEEEeeccCC
Confidence 5544310 023667889999987654211 11 111122567899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc-EEEecCCCCHHHHH
Q 003682 288 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP-VVLIDTPLQFYERI 366 (803)
Q Consensus 288 Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~-v~~~~~~~~~~~l~ 366 (803)
||+..+++|++.+.+++|+++ |+++|... +..........+++.+ .+..+ |.+..+.++.+++.
T Consensus 198 K~~~~ll~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~-------~~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 198 KGLELLLEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAER-------LGLADRVIFINRYLPDEELP 262 (366)
T ss_pred CCHHHHHHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHh-------cCCCCcEEEecCcCCHHHHH
Confidence 999999999999998887655 88887432 1111111110012222 22233 44444459999999
Q ss_pred HHHHhcccceeccccc--CCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC---CCCceeCCCCHH
Q 003682 367 AYYVIAECCLVTAVRD--GMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL---SGAIRVNPWNID 441 (803)
Q Consensus 367 aly~~Adv~v~~S~~E--G~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l---~~~~lvnP~d~~ 441 (803)
.+|+.||++++||..| |++++++|||+| |.|+|+|+.+| .+.+ ..|+++++.|++
T Consensus 263 ~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~-------------------G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~ 322 (366)
T cd03822 263 ELFSAADVVVLPYRSADQTQSGVLAYAIGF-------------------GKPVISTPVGH-AEEVLDGGTGLLVPPGDPA 322 (366)
T ss_pred HHHhhcCEEEecccccccccchHHHHHHHc-------------------CCCEEecCCCC-hheeeeCCCcEEEcCCCHH
Confidence 9999999999999999 999999999999 66799999988 6666 348999999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHH
Q 003682 442 AVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 485 (803)
Q Consensus 442 ~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 485 (803)
+++++|.++++.+ +.+....+..++++.++++..+++++.+.+
T Consensus 323 ~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 323 ALAEAIRRLLADP-ELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHHHHHHcCh-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 9999999999854 445556667777888899999999887654
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-18 Score=191.98 Aligned_cols=274 Identities=16% Similarity=0.165 Sum_probs=192.2
Q ss_pred HHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhh
Q 003682 127 IFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDY 206 (803)
Q Consensus 127 ~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~ 206 (803)
.++..+ +..++ |+|++|..+...+..++..+....+..+.+|.+-. +... ....+...+-.+|.+-..+...
T Consensus 70 ~~~~~~-~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~vi~~s~~~ 141 (355)
T cd03799 70 VLAREL-RRLGI--DHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDI----FRSP-DAIDLDEKLARADFVVAISEYN 141 (355)
T ss_pred HHHHHH-HhcCC--CEEEECCCCchHHHHHHHHHhcCCCEEEEEecccc----cccC-chHHHHHHHhhCCEEEECCHHH
Confidence 344433 34556 99999987666666666665557888888884321 1111 1123334455789998888766
Q ss_pred HHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCccc
Q 003682 207 ARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDI 286 (803)
Q Consensus 207 ~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~ 286 (803)
.+.+... .+ ....++.++|+|+|.+.|.... .....++..|+++||+.+
T Consensus 142 ~~~l~~~----~~---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~ 190 (355)
T cd03799 142 RQQLIRL----LG---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVE 190 (355)
T ss_pred HHHHHHh----cC---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeecc
Confidence 6655431 11 1223677899999988775221 111245678999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHH
Q 003682 287 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 366 (803)
Q Consensus 287 ~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~ 366 (803)
.||+..+++|++.+.+++|++ .|+++|.. +...++++. +.+ .+..+.+.+.|.++.+++.
T Consensus 191 ~k~~~~l~~~~~~l~~~~~~~----~l~i~G~~-----~~~~~~~~~----~~~-------~~~~~~v~~~g~~~~~~l~ 250 (355)
T cd03799 191 KKGLDYLLEALALLKDRGIDF----RLDIVGDG-----PLRDELEAL----IAE-------LGLEDRVTLLGAKSQEEVR 250 (355)
T ss_pred ccCHHHHHHHHHHHhhcCCCe----EEEEEECC-----ccHHHHHHH----HHH-------cCCCCeEEECCcCChHHHH
Confidence 999999999999988776654 48877743 222333333 333 2334567788899999999
Q ss_pred HHHHhcccceecccc------cCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCC
Q 003682 367 AYYVIAECCLVTAVR------DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNP 437 (803)
Q Consensus 367 aly~~Adv~v~~S~~------EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP 437 (803)
.+|+.||++++||.. ||||++++|||+| |.|+|+|+.+|..+.+. .|++++|
T Consensus 251 ~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~~~i~~~~~g~~~~~ 311 (355)
T cd03799 251 ELLRAADLFVLPSVTAADGDREGLPVVLMEAMAM-------------------GLPVISTDVSGIPELVEDGETGLLVPP 311 (355)
T ss_pred HHHHhCCEEEecceecCCCCccCccHHHHHHHHc-------------------CCCEEecCCCCcchhhhCCCceEEeCC
Confidence 999999999999999 9999999999999 67799999988887773 4899999
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccc-cCCHHHHHH
Q 003682 438 WNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVS-THDVAYWAR 479 (803)
Q Consensus 438 ~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~-~~~~~~W~~ 479 (803)
.|+++++++|.++++.+.. +....+..++.+. .+++...++
T Consensus 312 ~~~~~l~~~i~~~~~~~~~-~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 312 GDPEALADAIERLLDDPEL-RREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred CCHHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHhcCHHHHhh
Confidence 9999999999999986544 4445555555553 466655543
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=190.55 Aligned_cols=286 Identities=19% Similarity=0.140 Sum_probs=199.9
Q ss_pred HHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhh----cCCCcHHHHHHHhcCCEEeccCHhhH
Q 003682 132 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYR----TLPIRDELLRALLNADLIGFHTFDYA 207 (803)
Q Consensus 132 i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~----~lp~~~~il~~ll~~dligf~~~~~~ 207 (803)
+++..++ |+|++|+++...+.. +..+.++.++.+.+|.++|...... ...........+..+|.+-+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 3444566 999999999887776 4445568899999998887543211 00111122233445788877776665
Q ss_pred HHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccc
Q 003682 208 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIF 287 (803)
Q Consensus 208 ~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~ 287 (803)
+.+... +.....++.++|+|+|...+.... ...........+++.|+++||+.+.
T Consensus 157 ~~~~~~-------------------~~~~~~~~~~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~g~~~~~ 211 (374)
T cd03801 157 EELREL-------------------GGVPPEKITVIPNGVDTERFRPAP------RAARRRLGIPEDEPVILFVGRLVPR 211 (374)
T ss_pred HHHHhc-------------------CCCCCCcEEEecCcccccccCccc------hHHHhhcCCcCCCeEEEEecchhhh
Confidence 555431 001113677889999988764211 0011111112457899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 003682 288 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIA 367 (803)
Q Consensus 288 Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~a 367 (803)
||+..+++|+..+.+++|+++ |+++|. ++....+++.++ + .+..+.+.+.+.++.+++..
T Consensus 212 k~~~~~i~~~~~~~~~~~~~~----l~i~G~-----~~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~ 271 (374)
T cd03801 212 KGVDLLLEALAKLRKEYPDVR----LVIVGD-----GPLREELEALAA----E-------LGLGDRVTFLGFVPDEDLPA 271 (374)
T ss_pred cCHHHHHHHHHHHhhhcCCeE----EEEEeC-----cHHHHHHHHHHH----H-------hCCCcceEEEeccChhhHHH
Confidence 999999999999988876544 887772 233333433332 2 12233556778899999999
Q ss_pred HHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHH
Q 003682 368 YYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVA 444 (803)
Q Consensus 368 ly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a 444 (803)
+|+.||+++.||..||+|++++|||+| |.|+|+++.+|..+.+. .|+++++.|+++++
T Consensus 272 ~~~~~di~i~~~~~~~~~~~~~Ea~~~-------------------g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 332 (374)
T cd03801 272 LYAAADVFVLPSLYEGFGLVLLEAMAA-------------------GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALA 332 (374)
T ss_pred HHHhcCEEEecchhccccchHHHHHHc-------------------CCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHH
Confidence 999999999999999999999999999 67899999999888884 48999999999999
Q ss_pred HHHHHHhCCCHHHHHHHHHHhh-cccccCCHHHHHHHHHHHH
Q 003682 445 EAMDSALGVSDAEKQMRHEKHY-RYVSTHDVAYWARSFLQDL 485 (803)
Q Consensus 445 ~ai~~aL~~~~~er~~r~~~~~-~~v~~~~~~~W~~~~l~~l 485 (803)
++|.++++.+... ....+..+ .....+++..+++++++.+
T Consensus 333 ~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 333 EAILRLLDDPELR-RRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHcChHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 9999999865443 33344444 4566789999998887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-18 Score=191.53 Aligned_cols=274 Identities=17% Similarity=0.145 Sum_probs=189.9
Q ss_pred hhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCc----HHHHH-HHhcCCEEeccCHhhHH
Q 003682 134 EVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIR----DELLR-ALLNADLIGFHTFDYAR 208 (803)
Q Consensus 134 ~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~----~~il~-~ll~~dligf~~~~~~~ 208 (803)
+..+| |+|++|.............+..+.|+.+.+|..||........... ..+.+ ..-.+|.+-+.+.....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 55677 8999996654333333333345688999999887743221111111 11222 23357777777765554
Q ss_pred HHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh--CCCEEEEeecCccc
Q 003682 209 HFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDI 286 (803)
Q Consensus 209 ~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~--~~~~iil~V~Rld~ 286 (803)
.+.. .. ...+.++|+|+|.+.|.+.... ...++.+ .++++|+++||+.+
T Consensus 158 ~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~G~~~~ 208 (364)
T cd03814 158 ELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD-------EALRARLGPPDRPVLLYVGRLAP 208 (364)
T ss_pred HHhc--------------------cC--CCceeecCCCccccccCccccc-------HHHHHHhCCCCCeEEEEEecccc
Confidence 2221 00 1245678999999877532211 1112222 45788999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHH
Q 003682 287 FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERI 366 (803)
Q Consensus 287 ~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~ 366 (803)
.||+..+++|++.+.++ |+++ |+++|.. ++...++ . ..+-+.+.|.++.+++.
T Consensus 209 ~k~~~~~i~~~~~l~~~-~~~~----l~i~G~~-----~~~~~~~--------~---------~~~~v~~~g~~~~~~~~ 261 (364)
T cd03814 209 EKNLEALLDADLPLRRR-PPVR----LVIVGDG-----PARARLE--------A---------RYPNVHFLGFLDGEELA 261 (364)
T ss_pred ccCHHHHHHHHHHhhhc-CCce----EEEEeCC-----chHHHHh--------c---------cCCcEEEEeccCHHHHH
Confidence 99999999999998876 6654 8888732 2222222 0 01234566678999999
Q ss_pred HHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHH
Q 003682 367 AYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAV 443 (803)
Q Consensus 367 aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~ 443 (803)
.+|+.||+++.||..||||++++||||| |.|+|+|+.+|..+.+. .|++++|.|.+++
T Consensus 262 ~~~~~~d~~l~~s~~e~~~~~~lEa~a~-------------------g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l 322 (364)
T cd03814 262 AAYASADVFVFPSRTETFGLVVLEAMAS-------------------GLPVVAPDAGGPADIVTDGENGLLVEPGDAEAF 322 (364)
T ss_pred HHHHhCCEEEECcccccCCcHHHHHHHc-------------------CCCEEEcCCCCchhhhcCCcceEEcCCCCHHHH
Confidence 9999999999999999999999999999 67899999999988884 4899999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHH
Q 003682 444 AEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 485 (803)
Q Consensus 444 a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 485 (803)
+++|.++++.+ +.+....+..++.+..+++..+++++++.+
T Consensus 323 ~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 323 AAALAALLADP-ELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHcCH-HHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 99999999744 455555666677777899999988887654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-19 Score=194.36 Aligned_cols=193 Identities=17% Similarity=0.172 Sum_probs=140.8
Q ss_pred ecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC
Q 003682 243 LPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARG 322 (803)
Q Consensus 243 ~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~ 322 (803)
+|.|||++.|.+... ...+..+++...+++..+|++|||+++.||+..+++|++++.+++|++..++.|+++|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 567999998863210 01111222222235678899999999999999999999999999998766677776651
Q ss_pred CchhHHHHHHHHHHHHHHHhcccCCCCcc-cEEEec--CCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCc
Q 003682 323 RGRDVQEVQSETHATVRRINKIFGRPGYQ-PVVLID--TPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNE 399 (803)
Q Consensus 323 ~~~~~~~l~~~v~~lv~~in~~~~~~~~~-~v~~~~--~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~ 399 (803)
. .+ .+ .+.. .|.+.. |.++.+++.++|+.||+||+||..||||++++|||||
T Consensus 192 --~---~~----~~-----------l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~----- 246 (335)
T PHA01633 192 --K---QF----TQ-----------LEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAM----- 246 (335)
T ss_pred --H---HH----HH-----------cCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHc-----
Confidence 1 11 11 1111 244443 6778999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCceEEecccccccccCCC---------------------CceeCCCCHHHHHHHHHHHhCCCHHHH
Q 003682 400 KLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG---------------------AIRVNPWNIDAVAEAMDSALGVSDAEK 458 (803)
Q Consensus 400 ~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~---------------------~~lvnP~d~~~~a~ai~~aL~~~~~er 458 (803)
|.|+|+|+.+|..|..++ |++++++|++++|++|.+++.+...+
T Consensus 247 --------------G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~- 311 (335)
T PHA01633 247 --------------GTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDRE- 311 (335)
T ss_pred --------------CCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChh-
Confidence 678999999887775331 45788899999999999998776432
Q ss_pred HHHHHHhhcccccCCHHHHHHHHH
Q 003682 459 QMRHEKHYRYVSTHDVAYWARSFL 482 (803)
Q Consensus 459 ~~r~~~~~~~v~~~~~~~W~~~~l 482 (803)
.+...+++..+++++..-.++++
T Consensus 312 -~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 312 -ERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred -hhhHHHHHHHHhcCHHHHHHHhh
Confidence 23445567777788887777664
|
|
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.9e-19 Score=192.81 Aligned_cols=270 Identities=18% Similarity=0.228 Sum_probs=184.0
Q ss_pred HHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCC---CcH----HH-HHHHhcCCEEeccC
Q 003682 132 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLP---IRD----EL-LRALLNADLIGFHT 203 (803)
Q Consensus 132 i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp---~~~----~i-l~~ll~~dligf~~ 203 (803)
+++..+| |+|++|+............+..+.++.+.+|.+|+....+.... ... .+ ...+-.+|.+-..+
T Consensus 79 ~~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s 156 (374)
T cd03817 79 ILKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPS 156 (374)
T ss_pred HHhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEecc
Confidence 3455666 89999987555444444444457899999998876332111111 000 11 12234578777766
Q ss_pred HhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEe
Q 003682 204 FDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLG 280 (803)
Q Consensus 204 ~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~ 280 (803)
......+.. . +...++.++|+|+|...+..... .. .++.+ .+++.|++
T Consensus 157 ~~~~~~~~~-----~----------------~~~~~~~vi~~~~~~~~~~~~~~----~~----~~~~~~~~~~~~~i~~ 207 (374)
T cd03817 157 EKIADLLRE-----Y----------------GVKRPIEVIPTGIDLDRFEPVDG----DD----ERRKLGIPEDEPVLLY 207 (374)
T ss_pred HHHHHHHHh-----c----------------CCCCceEEcCCccchhccCccch----hH----HHHhcCCCCCCeEEEE
Confidence 654433321 0 11124678899999887753211 11 12222 45788999
Q ss_pred ecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCC
Q 003682 281 VDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 360 (803)
Q Consensus 281 V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~ 360 (803)
+||+.+.||+..+++|++.+.++.|+++ |+++|.+ +... .+++++.+. +..+.+.+.+.+
T Consensus 208 ~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~~-----~~~~----~~~~~~~~~-------~~~~~v~~~g~~ 267 (374)
T cd03817 208 VGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGDG-----PERE----ELEELAREL-------GLADRVIFTGFV 267 (374)
T ss_pred EeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeCC-----chHH----HHHHHHHHc-------CCCCcEEEeccC
Confidence 9999999999999999999988766554 8888732 2222 233333332 223456677899
Q ss_pred CHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCC
Q 003682 361 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNP 437 (803)
Q Consensus 361 ~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP 437 (803)
+.+++..+|+.||++++||..||+|++++|||+| |.|+|+|+.+|..+.+. +|+++++
T Consensus 268 ~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~-------------------g~PvI~~~~~~~~~~i~~~~~g~~~~~ 328 (374)
T cd03817 268 PREELPDYYKAADLFVFASTTETQGLVLLEAMAA-------------------GLPVVAVDAPGLPDLVADGENGFLFPP 328 (374)
T ss_pred ChHHHHHHHHHcCEEEecccccCcChHHHHHHHc-------------------CCcEEEeCCCChhhheecCceeEEeCC
Confidence 9999999999999999999999999999999999 67899999999888873 4899999
Q ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCC
Q 003682 438 WNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHD 473 (803)
Q Consensus 438 ~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~ 473 (803)
.|. +++++|.++++++... +...+..++++.+++
T Consensus 329 ~~~-~~~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~ 362 (374)
T cd03817 329 GDE-ALAEALLRLLQDPELR-RRLSKNAEESAEKFS 362 (374)
T ss_pred CCH-HHHHHHHHHHhChHHH-HHHHHHHHHHHHHHH
Confidence 888 9999999999876543 445555666665554
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.7e-19 Score=203.47 Aligned_cols=266 Identities=12% Similarity=0.058 Sum_probs=165.7
Q ss_pred hhcCCCCCeEEEeCccccchH---HHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHH
Q 003682 134 EVISPDDDFVWVHDYHLMVLP---TFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHF 210 (803)
Q Consensus 134 ~~~~~~~d~iwihDyhl~llp---~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~F 210 (803)
...+| |+|++|..-.+... ....+++ + ++...+||.||.+--+..+.. ++.++ ..++.+|
T Consensus 431 ~~f~P--DVVHLatP~~LGw~~~Glr~ArKl-~-PVVasyHTny~eYl~~y~~g~----L~~~l---------lk~l~~~ 493 (794)
T PLN02501 431 PSKDA--DIAILEEPEHLNWYHHGKRWTDKF-N-HVVGVVHTNYLEYIKREKNGA----LQAFF---------VKHINNW 493 (794)
T ss_pred hccCC--CEEEECCchhhccHHHHHHHHHHc-C-CeEEEEeCCcHHHHhHhcchh----HHHHH---------HHHHHHH
Confidence 44567 99999988444433 3333333 3 699999999996432222211 11111 1133334
Q ss_pred HHH--HHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCcc
Q 003682 211 LSC--CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMD 285 (803)
Q Consensus 211 l~~--~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld 285 (803)
+.. |.+++.++..... + . +. .+. ..+|||++.|.+... . ... ..+ ...+.+++||||.
T Consensus 494 v~r~hcD~VIaPS~atq~----L--~-~~-vI~-nVnGVDte~F~P~~r---~----~~~-r~lgi~~~~kgiLfVGRLa 556 (794)
T PLN02501 494 VTRAYCHKVLRLSAATQD----L--P-KS-VIC-NVHGVNPKFLKIGEK---V----AEE-RELGQQAFSKGAYFLGKMV 556 (794)
T ss_pred HHHhhCCEEEcCCHHHHH----h--c-cc-cee-ecccccccccCCcch---h----HHH-HhcCCccccCceEEEEccc
Confidence 443 6666665532221 1 1 11 111 125999998874321 1 111 122 1224589999999
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHH
Q 003682 286 IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYER 365 (803)
Q Consensus 286 ~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l 365 (803)
+.||+..+|+|+..+.++.|+++ |+++| +|++.+++++.+. +.+ . .+++ .|.. ++.
T Consensus 557 ~EKGld~LLeAla~L~~~~pnvr----LvIVG-----DGP~reeLe~la~----eLg-------L-~V~F-LG~~--dd~ 612 (794)
T PLN02501 557 WAKGYRELIDLLAKHKNELDGFN----LDVFG-----NGEDAHEVQRAAK----RLD-------L-NLNF-LKGR--DHA 612 (794)
T ss_pred ccCCHHHHHHHHHHHHhhCCCeE----EEEEc-----CCccHHHHHHHHH----HcC-------C-EEEe-cCCC--CCH
Confidence 99999999999999888877654 88887 4555445544443 322 2 2444 4443 345
Q ss_pred HHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC--CCceeCCCCHHHH
Q 003682 366 IAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS--GAIRVNPWNIDAV 443 (803)
Q Consensus 366 ~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~--~~~lvnP~d~~~~ 443 (803)
..+|+.+||||+||.+||||+|++||||| |.|||+++.+|...... +|++ +.|.+++
T Consensus 613 ~~lyasaDVFVlPS~sEgFGlVlLEAMA~-------------------GlPVVATd~pG~e~V~~g~nGll--~~D~Eaf 671 (794)
T PLN02501 613 DDSLHGYKVFINPSISDVLCTATAEALAM-------------------GKFVVCADHPSNEFFRSFPNCLT--YKTSEDF 671 (794)
T ss_pred HHHHHhCCEEEECCCcccchHHHHHHHHc-------------------CCCEEEecCCCCceEeecCCeEe--cCCHHHH
Confidence 58999999999999999999999999999 67899999988543222 3443 4789999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHH
Q 003682 444 AEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQD 484 (803)
Q Consensus 444 a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~ 484 (803)
+++|.++|..++. +... .. ...+++..-++++++.
T Consensus 672 AeAI~~LLsd~~~-rl~~-~a----~~~~SWeAaadrLle~ 706 (794)
T PLN02501 672 VAKVKEALANEPQ-PLTP-EQ----RYNLSWEAATQRFMEY 706 (794)
T ss_pred HHHHHHHHhCchh-hhHH-HH----HhhCCHHHHHHHHHHh
Confidence 9999999997653 2111 11 2256777777776654
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.81 E-value=5e-19 Score=196.98 Aligned_cols=281 Identities=16% Similarity=0.086 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCC---ChhhhhcC-CCcHHHHHHHhc
Q 003682 120 AYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFP---SSEIYRTL-PIRDELLRALLN 195 (803)
Q Consensus 120 ~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP---~~~~~~~l-p~~~~il~~ll~ 195 (803)
...++-+.|-+.+.. .+. .|+|.+|-.+.... .+.......+...++|...- .......+ ...+.++..+-.
T Consensus 82 ~~~~l~~~~l~~l~~-~~~-~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (372)
T cd04949 82 NEEELFAFFLDELNK-DTK-PDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDK 157 (372)
T ss_pred CHHHHHHHHHHHHhc-CCC-CCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhh
Confidence 344455555555544 232 48999987776655 23333345566777774321 11000000 112344455567
Q ss_pred CCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCC
Q 003682 196 ADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQ 275 (803)
Q Consensus 196 ~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~ 275 (803)
+|.+.+.+..-.+.+.... +. ..++.++|+|++.+.+.... .....+
T Consensus 158 ~d~ii~~s~~~~~~l~~~~----~~----------------~~~v~~ip~g~~~~~~~~~~-------------~~~~~~ 204 (372)
T cd04949 158 VDGVIVATEQQKQDLQKQF----GN----------------YNPIYTIPVGSIDPLKLPAQ-------------FKQRKP 204 (372)
T ss_pred CCEEEEccHHHHHHHHHHh----CC----------------CCceEEEcccccChhhcccc-------------hhhcCC
Confidence 8888887776665554311 10 01267899999988765210 011345
Q ss_pred EEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEE
Q 003682 276 IVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVL 355 (803)
Q Consensus 276 ~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~ 355 (803)
..|+++||+.+.||+..+++|+.++.+++|+++ |+++|.+. ....+...+ .+ .+....+.
T Consensus 205 ~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g~-----~~~~~~~~~----~~-------~~~~~~v~ 264 (372)
T cd04949 205 HKIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYGD-----EEEKLKELI----EE-------LGLEDYVF 264 (372)
T ss_pred CeEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeCc-----hHHHHHHHH----HH-------cCCcceEE
Confidence 689999999999999999999999999999876 88787432 223333332 22 22334556
Q ss_pred ecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccc-cccccCC---C
Q 003682 356 IDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV-GCSPSLS---G 431 (803)
Q Consensus 356 ~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~-G~~~~l~---~ 431 (803)
+.|. .+++..+|+.||++|+||..||||++++|||+| |.|+|+|+.+ |..+.+. +
T Consensus 265 ~~g~--~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~-------------------G~PvI~~~~~~g~~~~v~~~~~ 323 (372)
T cd04949 265 LKGY--TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSH-------------------GLPVISYDVNYGPSEIIEDGEN 323 (372)
T ss_pred EcCC--CCCHHHHHhhhhEEEecccccccChHHHHHHhC-------------------CCCEEEecCCCCcHHHcccCCC
Confidence 6663 467999999999999999999999999999999 6789999987 7777772 4
Q ss_pred CceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHH
Q 003682 432 AIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 479 (803)
Q Consensus 432 ~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 479 (803)
|++++|.|++++|++|..+++.+ +.+....+..++...++++..+++
T Consensus 324 G~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 324 GYLVPKGDIEALAEAIIELLNDP-KLLQKFSEAAYENAERYSEENVWE 370 (372)
T ss_pred ceEeCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhhHHHHHh
Confidence 89999999999999999999865 444445555555566676666654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-18 Score=190.10 Aligned_cols=280 Identities=16% Similarity=0.172 Sum_probs=189.5
Q ss_pred hhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCC-cHHHHHHH-hcCCEEeccCHhhHHHHH
Q 003682 134 EVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPI-RDELLRAL-LNADLIGFHTFDYARHFL 211 (803)
Q Consensus 134 ~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~-~~~il~~l-l~~dligf~~~~~~~~Fl 211 (803)
+..+| |+|++|+++......+........++.+..|..++... ...+. ...+..-+ -.+|.+-..+......+.
T Consensus 77 ~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 152 (365)
T cd03807 77 RRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG--KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQ 152 (365)
T ss_pred HhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc--chhHhHHHHHHHHhccccCeEEeccHHHHHHHH
Confidence 44566 99999999987777776665467889999997665432 00011 11111111 234565444443333222
Q ss_pred HHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCccccc
Q 003682 212 SCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFK 288 (803)
Q Consensus 212 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~~K 288 (803)
. . +. ...++.++|+|+|...|..... .....++++ .++++|+++||+++.|
T Consensus 153 ~-~----~~---------------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K 206 (365)
T cd03807 153 A-I----GY---------------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQK 206 (365)
T ss_pred H-c----CC---------------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhc
Confidence 2 0 11 1225667899999887753211 112233333 4678899999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHH
Q 003682 289 GISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAY 368 (803)
Q Consensus 289 gi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~al 368 (803)
|+..+++|+..+.+++|+++ |+++|.++ .....+.... .. .+..+.+.+.+. .+++..+
T Consensus 207 ~~~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~~~~~~---~~-------~~~~~~v~~~g~--~~~~~~~ 265 (365)
T cd03807 207 DHATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANLELLAL---KE-------LGLEDKVILLGE--RSDVPAL 265 (365)
T ss_pred CHHHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHHHHHHH---Hh-------cCCCceEEEccc--cccHHHH
Confidence 99999999999988877654 88887433 2222222211 01 122334455553 4689999
Q ss_pred HHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC-CCceeCCCCHHHHHHHH
Q 003682 369 YVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-GAIRVNPWNIDAVAEAM 447 (803)
Q Consensus 369 y~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~-~~~lvnP~d~~~~a~ai 447 (803)
|+.||++++||..||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|+++++++|
T Consensus 266 ~~~adi~v~ps~~e~~~~~~~Ea~a~-------------------g~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i 326 (365)
T cd03807 266 LNALDVFVLSSLSEGFPNVLLEAMAC-------------------GLPVVATDVGDNAELVGDTGFLVPPGDPEALAEAI 326 (365)
T ss_pred HHhCCEEEeCCccccCCcHHHHHHhc-------------------CCCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHH
Confidence 99999999999999999999999999 67899999999988885 59999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHhhcccc-cCCHHHHHHHHHHH
Q 003682 448 DSALGVSDAEKQMRHEKHYRYVS-THDVAYWARSFLQD 484 (803)
Q Consensus 448 ~~aL~~~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~ 484 (803)
.++++++ +++....+..++++. .+++...++++.+.
T Consensus 327 ~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 327 EALLADP-ALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999866 445555556666654 48888888877664
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.6e-19 Score=181.06 Aligned_cols=190 Identities=19% Similarity=0.153 Sum_probs=117.8
Q ss_pred EEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeCCc----
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYG---- 608 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~~~---- 608 (803)
+|++|+||||++ .+. ++++++++|++| ++.|+.++++|||+...+..++..+. ..+++++||+.|..+..
T Consensus 1 li~~DlDGTLl~---~~~-~~~~~~~ai~~l-~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~ 75 (225)
T TIGR02461 1 VIFTDLDGTLLP---PGY-EPGPAREALEEL-KDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPF 75 (225)
T ss_pred CEEEeCCCCCcC---CCC-CchHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccc
Confidence 589999999998 333 556799999998 88899999999999999999887763 34799999999988542
Q ss_pred -----------eeEEeecCCCCccHHHHHHHHHHHHhhcCCCceEee---cc-c---eEEEe---e---ccCCCccchhh
Q 003682 609 -----------VDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIET---KE-S---ALVWN---F---QYADPDFGSCQ 664 (803)
Q Consensus 609 -----------~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~---k~-~---~~~~~---~---~~~d~~~~~~~ 664 (803)
..+...++. +.++++++...+..+-.++.. .. . .+... . +.....+-..
T Consensus 76 ~~~~~~~~~~~~i~~~~l~~------~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~- 148 (225)
T TIGR02461 76 PVGAGREVGNYEVIELGKPV------AKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLW- 148 (225)
T ss_pred cccccccCCCeEEEEcCCCH------HHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCC-
Confidence 122222211 222333322222111111000 00 0 00000 0 0000000000
Q ss_pred HHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCC--CcccEEEEeCChhhHHHHHHcchh
Q 003682 665 AKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGM--LPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 665 ~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi--~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
..+....+.+.+....+.+..+..++++ ++++|||.|++.+++.+ ++ +.+++++|||+.||++||+.+|.+
T Consensus 149 ~~e~~~~~~~~~~~~~~~~~~s~~~~~i-~~~~sK~~al~~l~~~~---~~~~~~~~~i~~GD~~nD~~ml~~ag~~ 221 (225)
T TIGR02461 149 SREGWEAILVTARARGLKYTHGGRFYTV-HGGSDKGKAIKRLLDLY---KLRPGAIESVGLGDSENDFPMFEVVDLA 221 (225)
T ss_pred CHHHHHHHHHHHHHcCCcEEECCEEEEE-CCCCCHHHHHHHHHHHh---ccccCcccEEEEcCCHHHHHHHHhCCCc
Confidence 0111222222233344566667777776 55999999999999998 66 566899999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.2e-19 Score=199.19 Aligned_cols=267 Identities=12% Similarity=0.058 Sum_probs=168.9
Q ss_pred HhhcCCCCCeEEEeCccccch---HHHHHhhCCCCeEEEEEecCCCChhhhhcCC--CcHHHHHHHhcCCEEeccCHhhH
Q 003682 133 MEVISPDDDFVWVHDYHLMVL---PTFLRKRFNRVKLGFFLHSPFPSSEIYRTLP--IRDELLRALLNADLIGFHTFDYA 207 (803)
Q Consensus 133 ~~~~~~~~d~iwihDyhl~ll---p~~lr~~~~~~~i~~flH~pfP~~~~~~~lp--~~~~il~~ll~~dligf~~~~~~ 207 (803)
++..+| |+|++|+.-.+.. ...++++. .. +..++|+.|+.+ ++... .....+... ...++
T Consensus 112 l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~~Y--~~~~~~g~~~~~l~~~---------~~~~~ 176 (462)
T PLN02846 112 IPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYLEY--VKREKNGRVKAFLLKY---------INSWV 176 (462)
T ss_pred HHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChHHH--HHHhccchHHHHHHHH---------HHHHH
Confidence 355677 9999999866665 34444444 34 777999988543 22111 001111111 11222
Q ss_pred HHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh-C-C--CEEEEeecC
Q 003682 208 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-K-G--QIVMLGVDD 283 (803)
Q Consensus 208 ~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~-~-~--~~iil~V~R 283 (803)
+.|. |+.++.++....+ +. . .+...+.|||++.|.+... . .++.+ + + .+++++|||
T Consensus 177 ~r~~--~d~vi~pS~~~~~----l~--~---~~i~~v~GVd~~~f~~~~~-----~----~~~~~~~~~~~~~~~l~vGR 236 (462)
T PLN02846 177 VDIY--CHKVIRLSAATQD----YP--R---SIICNVHGVNPKFLEIGKL-----K----LEQQKNGEQAFTKGAYYIGK 236 (462)
T ss_pred HHHh--cCEEEccCHHHHH----Hh--h---CEEecCceechhhcCCCcc-----c----HhhhcCCCCCcceEEEEEec
Confidence 2221 4444443321111 00 0 1222357999998763211 1 11122 2 2 357999999
Q ss_pred cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHH
Q 003682 284 MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFY 363 (803)
Q Consensus 284 ld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~ 363 (803)
|.+.||+..+|+|++.+.++.|+++ |+++| +||+.+++++.+.+ + +.. +++|.|..+.+
T Consensus 237 L~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~~~a~~----l-------~l~-~~vf~G~~~~~ 295 (462)
T PLN02846 237 MVWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVKAAAEK----L-------ELD-VRVYPGRDHAD 295 (462)
T ss_pred CcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHHHHHHh----c-------CCc-EEEECCCCCHH
Confidence 9999999999999999988888755 88777 56666666555443 2 222 44577755544
Q ss_pred HHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCH
Q 003682 364 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNI 440 (803)
Q Consensus 364 ~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~ 440 (803)
.+|+.+||||+||.+||||+|++||||| |.|||+++..| .+.+. +|+++ .|.
T Consensus 296 ---~~~~~~DvFv~pS~~Et~g~v~lEAmA~-------------------G~PVVa~~~~~-~~~v~~~~ng~~~--~~~ 350 (462)
T PLN02846 296 ---PLFHDYKVFLNPSTTDVVCTTTAEALAM-------------------GKIVVCANHPS-NEFFKQFPNCRTY--DDG 350 (462)
T ss_pred ---HHHHhCCEEEECCCcccchHHHHHHHHc-------------------CCcEEEecCCC-cceeecCCceEec--CCH
Confidence 6899999999999999999999999999 67799999887 46662 36666 489
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHH
Q 003682 441 DAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 486 (803)
Q Consensus 441 ~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 486 (803)
++++++|.++|..+++++..+ .+ ..+++..-++++++.+.
T Consensus 351 ~~~a~ai~~~l~~~~~~~~~~---a~---~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 351 KGFVRATLKALAEEPAPLTDA---QR---HELSWEAATERFLRVAD 390 (462)
T ss_pred HHHHHHHHHHHccCchhHHHH---HH---HhCCHHHHHHHHHHHhc
Confidence 999999999998654333211 11 36787877887777654
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.1e-19 Score=194.10 Aligned_cols=240 Identities=16% Similarity=0.141 Sum_probs=165.5
Q ss_pred HHHhhcCCCCCeEEEeCccccchHHHHHhhC-CCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHH
Q 003682 131 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRF-NRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARH 209 (803)
Q Consensus 131 ~i~~~~~~~~d~iwihDyhl~llp~~lr~~~-~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~ 209 (803)
++++..+| |+||+|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+-..+....+.
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 45566677 999999987776666666542 23456666776554332211 11234678877766654444
Q ss_pred HHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcc--cc
Q 003682 210 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMD--IF 287 (803)
Q Consensus 210 Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld--~~ 287 (803)
+.. .++. ..++.++|+|||.+.+... .+ ...+++.|+++||+. +.
T Consensus 148 ~~~-----~~~~---------------~~ki~vi~N~id~~~~~~~--~~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGIS---------------AQRISVIYNPVEIKTIIIP--PP-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCCC---------------HHHEEEEcCCCCHHHccCC--Cc-----------ccCCCcEEEEEEEEecccC
Confidence 332 1211 1245678999997655311 00 013467899999996 46
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCC--CHHHH
Q 003682 288 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL--QFYER 365 (803)
Q Consensus 288 Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~--~~~~l 365 (803)
||+..+++|+..+. + ++.|+++|. +++.++++ +++.+. +....+.|.|.+ +.+++
T Consensus 195 k~~~~l~~a~~~~~---~----~~~l~ivG~-----g~~~~~l~----~~~~~~-------~l~~~v~f~G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQTT---G----EWQLHIIGD-----GSDFEKCK----AYSREL-------GIEQRIIWHGWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhhC---C----CeEEEEEeC-----CccHHHHH----HHHHHc-------CCCCeEEEecccCCcHHHH
Confidence 99999999998762 2 456888883 34434443 333332 233345666655 45899
Q ss_pred HHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecc-cccccccCC---CCceeCCCCHH
Q 003682 366 IAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE-FVGCSPSLS---GAIRVNPWNID 441 (803)
Q Consensus 366 ~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~-~~G~~~~l~---~~~lvnP~d~~ 441 (803)
..+|+.||++|+||..||||++++||||| |.|+|+|+ .+|..+.+. +|++|+|.|++
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~-------------------G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSY-------------------GIPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHc-------------------CCCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 99999999999999999999999999999 67899999 888888773 38999999999
Q ss_pred HHHHHHHHHhCCCH
Q 003682 442 AVAEAMDSALGVSD 455 (803)
Q Consensus 442 ~~a~ai~~aL~~~~ 455 (803)
++|++|.++++.+.
T Consensus 313 ~la~~i~~l~~~~~ 326 (359)
T PRK09922 313 EFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999998764
|
|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.8e-18 Score=189.61 Aligned_cols=283 Identities=20% Similarity=0.211 Sum_probs=196.4
Q ss_pred hcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHHH
Q 003682 135 VISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCC 214 (803)
Q Consensus 135 ~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~~ 214 (803)
..++ |+|++|......+......+..+.++.+..|.+++....... ..+......+-.+|.+-+.+....+.+....
T Consensus 91 ~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 167 (377)
T cd03798 91 RFRP--DLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG 167 (377)
T ss_pred cCCC--CEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc
Confidence 4555 899999555444444444444457899999977664322211 1222333445678999888876666555311
Q ss_pred HHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHH
Q 003682 215 SRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKL 294 (803)
Q Consensus 215 ~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l 294 (803)
....++.++|+|+|...+..... ...... ....+++.|+++||+.+.||+..++
T Consensus 168 --------------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li 221 (377)
T cd03798 168 --------------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLI 221 (377)
T ss_pred --------------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHH
Confidence 11235678899999887753211 111111 1124678999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhccc
Q 003682 295 LAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAEC 374 (803)
Q Consensus 295 ~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv 374 (803)
+|++.+.+++|+++ |+++|.+ +....+.+.++ . .+..+.+.+.|.++.+++..+|+.||+
T Consensus 222 ~~~~~~~~~~~~~~----l~i~g~~-----~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (377)
T cd03798 222 EALARLLKKRPDVH----LVIVGDG-----PLREALEALAA----E-------LGLEDRVTFLGAVPHEEVPAYYAAADV 281 (377)
T ss_pred HHHHHHHhcCCCeE----EEEEcCC-----cchHHHHHHHH----h-------cCCcceEEEeCCCCHHHHHHHHHhcCe
Confidence 99999988766544 7777732 23333333332 2 333456677889999999999999999
Q ss_pred ceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHHHh
Q 003682 375 CLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSAL 451 (803)
Q Consensus 375 ~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL 451 (803)
++.||..||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|+++++++|.+++
T Consensus 282 ~i~~~~~~~~~~~~~Ea~~~-------------------G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~ 342 (377)
T cd03798 282 FVLPSLREGFGLVLLEAMAC-------------------GLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLL 342 (377)
T ss_pred eecchhhccCChHHHHHHhc-------------------CCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHh
Confidence 99999999999999999999 67899999999888873 368999999999999999999
Q ss_pred CCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHH
Q 003682 452 GVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLER 487 (803)
Q Consensus 452 ~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 487 (803)
+++.. ....+........+++..+++++.+.+++
T Consensus 343 ~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 343 ADPWL--RLGRAARRRVAERFSWENVAERLLELYRE 376 (377)
T ss_pred cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 87665 22223333445567888888888776543
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-18 Score=188.65 Aligned_cols=278 Identities=17% Similarity=0.180 Sum_probs=192.7
Q ss_pred hcCCCCCeEEEeC-ccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcC-CC-------cHHHH-HHHhcCCEEeccCH
Q 003682 135 VISPDDDFVWVHD-YHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTL-PI-------RDELL-RALLNADLIGFHTF 204 (803)
Q Consensus 135 ~~~~~~d~iwihD-yhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~l-p~-------~~~il-~~ll~~dligf~~~ 204 (803)
..+| |+|++|. ..+..++....++..+.++.+.+|..||........ .. ...+. ..+..+|.+-+.+.
T Consensus 97 ~~~~--D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~ 174 (394)
T cd03794 97 RRRP--DVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISP 174 (394)
T ss_pred ccCC--CEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECH
Confidence 4455 9999998 445555666555556889999999988754322111 11 11111 23456788888888
Q ss_pred hhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCc
Q 003682 205 DYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDM 284 (803)
Q Consensus 205 ~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rl 284 (803)
...+.+.. .+ ....++.++|+|+|...+...... .. ........++.+|+++||+
T Consensus 175 ~~~~~~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 175 GMREYLVR-----RG---------------VPPEKISVIPNGVDLELFKPPPAD----ES-LRKELGLDDKFVVLYAGNI 229 (394)
T ss_pred HHHHHHHh-----cC---------------CCcCceEEcCCCCCHHHcCCccch----hh-hhhccCCCCcEEEEEecCc
Confidence 77766551 01 112356789999998877532111 00 1111122567899999999
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHH
Q 003682 285 DIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYE 364 (803)
Q Consensus 285 d~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~ 364 (803)
.+.||+..+++|+..+.+. |++ .|+++|. ++....+++.+. . .+...++++ +.++.++
T Consensus 230 ~~~k~~~~l~~~~~~l~~~-~~~----~l~i~G~-----~~~~~~~~~~~~----~-------~~~~~v~~~-g~~~~~~ 287 (394)
T cd03794 230 GRAQGLDTLLEAAALLKDR-PDI----RFLIVGD-----GPEKEELKELAK----A-------LGLDNVTFL-GRVPKEE 287 (394)
T ss_pred ccccCHHHHHHHHHHHhhc-CCe----EEEEeCC-----cccHHHHHHHHH----H-------cCCCcEEEe-CCCChHH
Confidence 9999999999999998776 554 4777773 333333333221 1 122335444 5899999
Q ss_pred HHHHHHhcccceecccccCC-----CCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeC
Q 003682 365 RIAYYVIAECCLVTAVRDGM-----NLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVN 436 (803)
Q Consensus 365 l~aly~~Adv~v~~S~~EG~-----~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvn 436 (803)
+..+|+.||++++||..|++ +++++|||+| |.|+|+|+.+|..+.+. .|++++
T Consensus 288 ~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~-------------------G~pvi~~~~~~~~~~~~~~~~g~~~~ 348 (394)
T cd03794 288 LPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAA-------------------GKPVLASVDGESAELVEEAGAGLVVP 348 (394)
T ss_pred HHHHHHhhCeeEEeccCcccccccCchHHHHHHHC-------------------CCcEEEecCCCchhhhccCCcceEeC
Confidence 99999999999999999876 5557999999 67899999999998883 489999
Q ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccc-cCCHHHHHHHH
Q 003682 437 PWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVS-THDVAYWARSF 481 (803)
Q Consensus 437 P~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~-~~~~~~W~~~~ 481 (803)
+.|+++++++|.+++. +++++....+..++++. .+++..+++++
T Consensus 349 ~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 349 PGDPEALAAAILELLD-DPEERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred CCCHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 9999999999999995 45555566666666666 68888888765
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.1e-17 Score=187.30 Aligned_cols=316 Identities=14% Similarity=0.156 Sum_probs=184.7
Q ss_pred CCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCc-HHHHHHHhcCCEEeccCH-------hhHHHHH
Q 003682 140 DDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIR-DELLRALLNADLIGFHTF-------DYARHFL 211 (803)
Q Consensus 140 ~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~-~~il~~ll~~dligf~~~-------~~~~~Fl 211 (803)
.|+++.||++.-....+||+..++++..|+.| ..+.=|.|-.. ..+- .++-.|.-. -+.++.+
T Consensus 149 ~dViH~HeWm~g~a~~~lK~~~~~VptVfTtH----AT~~GR~l~~g~~~~y-----~~l~~~~~d~eA~~~~I~~r~~i 219 (590)
T cd03793 149 AVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTH----ATLLGRYLCAGNVDFY-----NNLDYFDVDKEAGKRGIYHRYCI 219 (590)
T ss_pred CeEEEEcchhHhHHHHHHHHhCCCCCEEEEec----ccccccccccCCcccc-----hhhhhcchhhhhhcccchHHHHH
Confidence 49999999999999999998889999999999 33333321100 0000 000001000 0122222
Q ss_pred HHH-----HHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCC----chHHHHHHH-----HHHHh---CC
Q 003682 212 SCC-----SRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNL----PETEAKVAE-----LQDQF---KG 274 (803)
Q Consensus 212 ~~~-----~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~----~~~~~~~~~-----l~~~~---~~ 274 (803)
+.. .+++.++...... .....++...+ |+|+|||++.|.+.... ...++++.+ ++.++ ++
T Consensus 220 E~~aa~~Ad~fttVS~it~~E--~~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d 296 (590)
T cd03793 220 ERAAAHCAHVFTTVSEITAYE--AEHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLD 296 (590)
T ss_pred HHHHHhhCCEEEECChHHHHH--HHHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCC
Confidence 211 1111111111000 01112333223 89999999998643211 011122222 34544 36
Q ss_pred CEEEEe-ecCccc-ccCHHHHHHHHHHHHHhCCCCC-CcEEEEEEecCCCCCc---------hhHHHHHHHHHHHHHHHh
Q 003682 275 QIVMLG-VDDMDI-FKGISLKLLAMEQLLSQNPSKR-GKIVLVQIANPARGRG---------RDVQEVQSETHATVRRIN 342 (803)
Q Consensus 275 ~~iil~-V~Rld~-~Kgi~~~l~A~~~ll~~~p~~~-~~v~lv~i~~~~~~~~---------~~~~~l~~~v~~lv~~in 342 (803)
++++++ +||+++ .||++.+|+|+.++-..-..-. +..|+..+..|..... +-..++++.+.++..+|.
T Consensus 297 ~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~ 376 (590)
T cd03793 297 KTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIG 376 (590)
T ss_pred CeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhh
Confidence 788888 799999 9999999999998755221111 2223333334443221 223456666666655555
Q ss_pred cc---------c-----------------------------------------------------CC-CCcccEEEecCC
Q 003682 343 KI---------F-----------------------------------------------------GR-PGYQPVVLIDTP 359 (803)
Q Consensus 343 ~~---------~-----------------------------------------------------~~-~~~~~v~~~~~~ 359 (803)
.+ . .. .+-..|+|....
T Consensus 377 ~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~ 456 (590)
T cd03793 377 KRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEF 456 (590)
T ss_pred hhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccc
Confidence 54 1 00 112234443333
Q ss_pred CC------HHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccccc----ccC
Q 003682 360 LQ------FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS----PSL 429 (803)
Q Consensus 360 ~~------~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~----~~l 429 (803)
++ ..+...+|+.||+||+||.+||||++++||||| |.|+|+|..+|.. +.+
T Consensus 457 L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~-------------------G~PvI~t~~~gf~~~v~E~v 517 (590)
T cd03793 457 LSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVM-------------------GIPSITTNLSGFGCFMEEHI 517 (590)
T ss_pred cCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHc-------------------CCCEEEccCcchhhhhHHHh
Confidence 22 235778899999999999999999999999999 6789999999984 444
Q ss_pred C----CCceeC-------CCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHH
Q 003682 430 S----GAIRVN-------PWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 486 (803)
Q Consensus 430 ~----~~~lvn-------P~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 486 (803)
. .|+.|. +.++++++++|.+.+.++..++........+....+++.+-+..+++.-.
T Consensus 518 ~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 518 EDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred ccCCCceEEEecCCccchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 2 378887 45678999999999876654444333333345556777777776665543
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.7e-18 Score=186.62 Aligned_cols=264 Identities=13% Similarity=0.090 Sum_probs=179.7
Q ss_pred hhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHHH
Q 003682 134 EVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSC 213 (803)
Q Consensus 134 ~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~~ 213 (803)
+..+| |+|++|+.+...+...+.... .++.+..|..++....... +.......+-.+|.+-+.+......+.
T Consensus 80 ~~~~~--d~i~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~-- 151 (348)
T cd03820 80 KNNKP--DVVISFLTSLLTFLASLGLKI--VKLIVSEHNSPDAYKKRLR--RLLLRRLLYRRADAVVVLTEEDRALYY-- 151 (348)
T ss_pred cccCC--CEEEEcCchHHHHHHHHhhcc--ccEEEecCCCccchhhhhH--HHHHHHHHHhcCCEEEEeCHHHHHHhh--
Confidence 44566 999999888222222222211 4788888876654322110 000122334567887776665441110
Q ss_pred HHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHH
Q 003682 214 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 293 (803)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~ 293 (803)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+
T Consensus 152 --------------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l 196 (348)
T cd03820 152 --------------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLL 196 (348)
T ss_pred --------------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHH
Confidence 0112356778999998765421 12467889999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcc
Q 003682 294 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAE 373 (803)
Q Consensus 294 l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Ad 373 (803)
++|++.+.+.+|+++ |+++|.+ ++...+.+ ++.+ .+..+.+.+.+. .+++..+|+.||
T Consensus 197 ~~~~~~l~~~~~~~~----l~i~G~~-----~~~~~~~~----~~~~-------~~~~~~v~~~g~--~~~~~~~~~~ad 254 (348)
T cd03820 197 IEAWAKIAKKHPDWK----LRIVGDG-----PEREALEA----LIKE-------LGLEDRVILLGF--TKNIEEYYAKAS 254 (348)
T ss_pred HHHHHHHHhcCCCeE----EEEEeCC-----CCHHHHHH----HHHH-------cCCCCeEEEcCC--cchHHHHHHhCC
Confidence 999999988777665 7777732 23333333 2333 233445666665 689999999999
Q ss_pred cceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC-C---CCceeCCCCHHHHHHHHHH
Q 003682 374 CCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S---GAIRVNPWNIDAVAEAMDS 449 (803)
Q Consensus 374 v~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~---~~~lvnP~d~~~~a~ai~~ 449 (803)
++++||..||||++++|||+| |.|+|+|+..|..+.+ . .|+++++.|+++++++|.+
T Consensus 255 ~~i~ps~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 315 (348)
T cd03820 255 IFVLTSRFEGFPMVLLEAMAF-------------------GLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLR 315 (348)
T ss_pred EEEeCccccccCHHHHHHHHc-------------------CCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHH
Confidence 999999999999999999999 6779999876655544 2 5899999999999999999
Q ss_pred HhCCCHHHHHHHHHHhhcccccCCHHHHHHHHH
Q 003682 450 ALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFL 482 (803)
Q Consensus 450 aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l 482 (803)
+++.+ +.+....+..++.++.+++..++++|.
T Consensus 316 ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 316 LMEDE-ELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHcCH-HHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 99844 444444555566778888888887764
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.8e-18 Score=175.12 Aligned_cols=189 Identities=14% Similarity=0.125 Sum_probs=127.3
Q ss_pred CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC-CCcEEecCcEEEEeCCcee
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGVD 610 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~-~l~lia~nGa~i~~~~~~~ 610 (803)
+|+||+||||||++ .+..+++.++++|++| +++|+.|++||||+..++..+.+.+. ..++|++||+.|+.+..
T Consensus 1 ~KLIftDLDGTLLd---~~~~~~~~a~~aL~~L-k~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~-- 74 (302)
T PRK12702 1 MRLVLSSLDGSLLD---LEFNSYGAARQALAAL-ERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEH-- 74 (302)
T ss_pred CcEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccc--
Confidence 48999999999999 6677889999999998 89999999999999999999988773 34799999999997743
Q ss_pred EEe-----------------ecCCCCccHHHHHHHHHHHHhhcCCC--------------ceE------eeccceEEEee
Q 003682 611 WET-----------------CVSVPDFSWKQIAEPVMKLYTETTDG--------------STI------ETKESALVWNF 653 (803)
Q Consensus 611 ~~~-----------------~~~~~~~~~~~~~~~i~~~y~~~~~g--------------~~i------e~k~~~~~~~~ 653 (803)
|.. .+...-..|+..+..+-..+.....| .-. ..++++-.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w 154 (302)
T PRK12702 75 YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSY 154 (302)
T ss_pred cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEe
Confidence 220 00011112333333332222111110 000 00111111111
Q ss_pred ccCCCccchhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEe------------------C---CCCHHHHHHHHHHHhhh
Q 003682 654 QYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKP------------------Q---GVNKGLVAQHQLETMHQ 712 (803)
Q Consensus 654 ~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p------------------~---gv~Kg~al~~ll~~l~~ 712 (803)
... ...+ .+.+...++.+..|..++.++. . +++||.|+++|.+.+..
T Consensus 155 ~~~--------~~~~----~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~ 222 (302)
T PRK12702 155 SGD--------PARL----REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQR 222 (302)
T ss_pred cCC--------HHHH----HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHh
Confidence 110 1111 4455666788888988988887 5 89999999999998833
Q ss_pred CCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 713 KGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 713 ~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
.. ..=.++++|||.||++||+++...
T Consensus 223 ~~-~~~~tiaLGDspND~~mLe~~D~~ 248 (302)
T PRK12702 223 HL-GPIKALGIGCSPPDLAFLRWSEQK 248 (302)
T ss_pred cc-CCceEEEecCChhhHHHHHhCCee
Confidence 22 233799999999999999999874
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-17 Score=183.59 Aligned_cols=263 Identities=16% Similarity=0.168 Sum_probs=178.3
Q ss_pred HHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHH
Q 003682 130 DKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARH 209 (803)
Q Consensus 130 ~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~ 209 (803)
.++++..+| |+|++|.+..+.++.+...+..+.|+.+.+|-.++.......+ .. ..|.+-..+....+.
T Consensus 89 ~~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~~~~~~------~~---~~d~ii~~s~~~~~~ 157 (359)
T cd03823 89 ARLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICPRQGLF------KK---GGDAVIAPSRFLLDR 157 (359)
T ss_pred HHHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecchhhhh------cc---CCCEEEEeCHHHHHH
Confidence 344555677 8999998855544433333334689999999665432111111 11 127777766655554
Q ss_pred HHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccC
Q 003682 210 FLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKG 289 (803)
Q Consensus 210 Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kg 289 (803)
|.. .+ ....++.++|+|+|...+..... ....++.+|+++||+.+.||
T Consensus 158 ~~~-----~~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~ 205 (359)
T cd03823 158 YVA-----NG---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKG 205 (359)
T ss_pred HHH-----cC---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccC
Confidence 442 01 00236788999999987652110 11246788999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHH
Q 003682 290 ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 369 (803)
Q Consensus 290 i~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly 369 (803)
+..+++|+..+.+ ++ +.|+++|... ......... +..+.+.+.|.++.+++..+|
T Consensus 206 ~~~li~~~~~l~~--~~----~~l~i~G~~~-----~~~~~~~~~--------------~~~~~v~~~g~~~~~~~~~~~ 260 (359)
T cd03823 206 VDLLLEAFKRLPR--GD----IELVIVGNGL-----ELEEESYEL--------------EGDPRVEFLGAYPQEEIDDFY 260 (359)
T ss_pred HHHHHHHHHHHHh--cC----cEEEEEcCch-----hhhHHHHhh--------------cCCCeEEEeCCCCHHHHHHHH
Confidence 9999999998866 44 4488887433 111111111 112356677889999999999
Q ss_pred Hhcccceeccc-ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHH
Q 003682 370 VIAECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAE 445 (803)
Q Consensus 370 ~~Adv~v~~S~-~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ 445 (803)
+.||++++||. .||+|++++|||+| |.|+|+|+.+|..+.+. .|++++|.|++++++
T Consensus 261 ~~ad~~i~ps~~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~ 321 (359)
T cd03823 261 AEIDVLVVPSIWPENFPLVIREALAA-------------------GVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAA 321 (359)
T ss_pred HhCCEEEEcCcccCCCChHHHHHHHC-------------------CCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHH
Confidence 99999999997 79999999999999 67899999999888883 489999999999999
Q ss_pred HHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHH
Q 003682 446 AMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQ 483 (803)
Q Consensus 446 ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 483 (803)
+|.++++ +++.+....+..++.+.. ..+++++++
T Consensus 322 ~i~~l~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 322 ALERLID-DPDLLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHHHHh-ChHHHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 9999998 444444444555544432 445554443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-17 Score=188.15 Aligned_cols=161 Identities=7% Similarity=0.010 Sum_probs=122.9
Q ss_pred CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCC--CCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcc
Q 003682 274 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSK--RGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 351 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~--~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~ 351 (803)
+..+++++||+.+.||+..+++|++.+.+..++. ..++.|+++|. |+..+++++.++ + .+..
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~-----G~~~~~l~~~~~----~-------~~l~ 294 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGK-----GPLKEKYLERIK----E-------LKLK 294 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEec-----CccHHHHHHHHH----H-------cCCC
Confidence 3568889999999999999999999987642111 11355888883 344444444443 3 3445
Q ss_pred cEEEecCCCCHHHHHHHHHhcccceecc---cccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccccccc
Q 003682 352 PVVLIDTPLQFYERIAYYVIAECCLVTA---VRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPS 428 (803)
Q Consensus 352 ~v~~~~~~~~~~~l~aly~~Adv~v~~S---~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~ 428 (803)
.++++.+.++.++++.+|++||++|+++ ..|||+++++||||| |.|+|+|+.+|..+.
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~-------------------G~PVI~s~~~~~~ei 355 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGC-------------------GLPVCALDFKCIDEL 355 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHc-------------------CCCEEEeCCCCHHHH
Confidence 6888888899999999999999998642 358899999999999 678999999999988
Q ss_pred CC---CCceeCCCCHHHHHHHHHHHhCCC--HHHHHHHHHHhhccccc
Q 003682 429 LS---GAIRVNPWNIDAVAEAMDSALGVS--DAEKQMRHEKHYRYVST 471 (803)
Q Consensus 429 l~---~~~lvnP~d~~~~a~ai~~aL~~~--~~er~~r~~~~~~~v~~ 471 (803)
+. +|++|+ |++++|++|.++++++ ++++..+.+..+++.+.
T Consensus 356 v~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~ 401 (415)
T cd03816 356 VKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESEL 401 (415)
T ss_pred hcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhc
Confidence 83 488884 8999999999999972 66666666666665543
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-17 Score=181.92 Aligned_cols=277 Identities=16% Similarity=0.134 Sum_probs=187.8
Q ss_pred HhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCC-cHHH-HHHHhcCCEEeccCHhhHHHH
Q 003682 133 MEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPI-RDEL-LRALLNADLIGFHTFDYARHF 210 (803)
Q Consensus 133 ~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~-~~~i-l~~ll~~dligf~~~~~~~~F 210 (803)
++..+| |+|++|..+..++..++.+.....++.+.+|...+.......... ...+ ...+-.+|.+.+.+....+.+
T Consensus 76 ~~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 153 (359)
T cd03808 76 LRKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLA 153 (359)
T ss_pred HHhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHH
Confidence 345567 899999888777777777655667788888764332111000000 0011 112335688888887776665
Q ss_pred HHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCH
Q 003682 211 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 290 (803)
Q Consensus 211 l~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi 290 (803)
.+. +.. .....+.+.|+|+|.+.+..... . ...++..|+++||+.+.||+
T Consensus 154 ~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~i~~~G~~~~~k~~ 203 (359)
T cd03808 154 LKL-----GII-------------KKKKTVLIPGSGVDLDRFSPSPE-----P-------IPEDDPVFLFVARLLKDKGI 203 (359)
T ss_pred HHh-----cCC-------------CcCceEEecCCCCChhhcCcccc-----c-------cCCCCcEEEEEeccccccCH
Confidence 541 100 01234566799999887652211 0 12467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 370 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~ 370 (803)
..+++|++.+.+++|+++ |+++|..... . ..... ++.. .+..+.+.+.|. .+++..+|+
T Consensus 204 ~~li~~~~~l~~~~~~~~----l~i~G~~~~~---~--~~~~~---~~~~-------~~~~~~v~~~g~--~~~~~~~~~ 262 (359)
T cd03808 204 DELLEAARILKAKGPNVR----LLLVGDGDEE---N--PAAIL---EIEK-------LGLEGRVEFLGF--RDDVPELLA 262 (359)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEcCCCcc---h--hhHHH---HHHh-------cCCcceEEEeec--cccHHHHHH
Confidence 999999999988777655 8888854311 1 11111 1111 112234445554 678999999
Q ss_pred hcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHH
Q 003682 371 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAM 447 (803)
Q Consensus 371 ~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai 447 (803)
.||++++||..||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|+++++++|
T Consensus 263 ~adi~i~ps~~e~~~~~~~Ea~~~-------------------G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i 323 (359)
T cd03808 263 AADVFVLPSYREGLPRVLLEAMAM-------------------GRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAI 323 (359)
T ss_pred hccEEEecCcccCcchHHHHHHHc-------------------CCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHH
Confidence 999999999999999999999999 67899999999998883 38999999999999999
Q ss_pred HHHhCCCHHHHHHHHHHhhcc-cccCCHHHHHHHHH
Q 003682 448 DSALGVSDAEKQMRHEKHYRY-VSTHDVAYWARSFL 482 (803)
Q Consensus 448 ~~aL~~~~~er~~r~~~~~~~-v~~~~~~~W~~~~l 482 (803)
.+++..+ +.+....+..+++ ...++...++++++
T Consensus 324 ~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 324 ERLIEDP-ELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9988744 4444445555555 56688888887764
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.1e-18 Score=183.55 Aligned_cols=186 Identities=13% Similarity=0.078 Sum_probs=137.0
Q ss_pred EEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 003682 239 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIAN 318 (803)
Q Consensus 239 ~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~ 318 (803)
++.++|+|||++.|.+... ...++.++++++|+.+.||+..+|+|++.+.+++|+++ ++++|.
T Consensus 119 ~i~vIpNGVd~~~f~~~~~-------------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~ 181 (331)
T PHA01630 119 PIYVIPHNLNPRMFEYKPK-------------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSS 181 (331)
T ss_pred CEEEECCCCCHHHcCCCcc-------------ccCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeC
Confidence 5678899999988753210 01245567778899999999999999999988877654 887772
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCC
Q 003682 319 PARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGN 398 (803)
Q Consensus 319 ~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~ 398 (803)
. .. +. .+. ++. .+.+.++.+++..+|+.||+||+||..||||++++|||||
T Consensus 182 ~-----~~--~~--~l~-------------~~~---~~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~---- 232 (331)
T PHA01630 182 N-----ML--DP--RLF-------------GLN---GVKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALAL---- 232 (331)
T ss_pred c-----cc--ch--hhc-------------ccc---ceeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHc----
Confidence 1 11 11 110 000 1234578999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCceEEecccccccccCCC-----------------------CceeCCCCHHHHHHHHHHHhCCC-
Q 003682 399 EKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG-----------------------AIRVNPWNIDAVAEAMDSALGVS- 454 (803)
Q Consensus 399 ~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~-----------------------~~lvnP~d~~~~a~ai~~aL~~~- 454 (803)
|.|+|+|+.+|..+.+.+ |++++| |.+++++++.++|..+
T Consensus 233 ---------------G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~ 296 (331)
T PHA01630 233 ---------------GLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWT 296 (331)
T ss_pred ---------------CCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCC
Confidence 678999999988887732 444555 7788999999998764
Q ss_pred -HHHHHHHHHHhhcccccCCHHHHHHHHHHHHH
Q 003682 455 -DAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 486 (803)
Q Consensus 455 -~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 486 (803)
++.+...........+++++...++++++.++
T Consensus 297 ~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 297 PEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 33333334444556778999999999988765
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.9e-18 Score=177.75 Aligned_cols=185 Identities=19% Similarity=0.306 Sum_probs=114.7
Q ss_pred CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC---CCcEEecCcEEEEeCCc
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE---GLGIAAEHGYFVRPNYG 608 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~---~l~lia~nGa~i~~~~~ 608 (803)
.++|++|+||||++ .+..-.....+.++. ....++.++++|||+.+++++.+...+ ...+|+.+|+.|+...
T Consensus 2 ~~ll~sDlD~Tl~~---~~~~~~~~l~~~l~~-~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~- 76 (247)
T PF05116_consen 2 PRLLASDLDGTLID---GDDEALARLEELLEQ-QARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGE- 76 (247)
T ss_dssp SEEEEEETBTTTBH---CHHHHHHHHHHHHHH-HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESS-
T ss_pred CEEEEEECCCCCcC---CCHHHHHHHHHHHHH-hhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcC-
Confidence 58999999999993 122223444455552 258899999999999999999887641 2457899999888832
Q ss_pred eeEEeecCCCCccHHHHHH-----HHHHHHhhcCCCceE----eeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCC
Q 003682 609 VDWETCVSVPDFSWKQIAE-----PVMKLYTETTDGSTI----ETKESALVWNFQYADPDFGSCQAKELLDHLESVLANE 679 (803)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~-----~i~~~y~~~~~g~~i----e~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~ 679 (803)
.|.. +..|.+.+. +..+....+.++... ....+.+++.+...+ ....++.|.+.+...
T Consensus 77 -~~~~-----d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~-------~~~~~~~i~~~l~~~ 143 (247)
T PF05116_consen 77 -NWQP-----DEEWQAHIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDD-------SADILEEIRARLRQR 143 (247)
T ss_dssp -TTEE------HHHHHHHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTS-------HCHHHHHHHHHHHCC
T ss_pred -CCcC-----hHHHHHHHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEeccc-------chhHHHHHHHHHHHc
Confidence 2211 122332222 111122222333221 122233444433221 122345556555554
Q ss_pred Ce---EEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcc
Q 003682 680 PV---SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK 737 (803)
Q Consensus 680 ~~---~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag 737 (803)
+. .+.++...++|.|+++|||.|++++++++ ++++++++++|||.||++||....
T Consensus 144 ~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~---~~~~~~vl~aGDSgND~~mL~~~~ 201 (247)
T PF05116_consen 144 GLRVNVIYSNGRDLDILPKGASKGAALRYLMERW---GIPPEQVLVAGDSGNDLEMLEGGD 201 (247)
T ss_dssp TCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHH---T--GGGEEEEESSGGGHHHHCCSS
T ss_pred CCCeeEEEccceeEEEccCCCCHHHHHHHHHHHh---CCCHHHEEEEeCCCCcHHHHcCcC
Confidence 43 34567889999999999999999999999 999999999999999999995554
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.6e-17 Score=180.10 Aligned_cols=261 Identities=16% Similarity=0.154 Sum_probs=173.0
Q ss_pred hcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHH-HHHHhcCCEEeccCHhhHHHHHHH
Q 003682 135 VISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDEL-LRALLNADLIGFHTFDYARHFLSC 213 (803)
Q Consensus 135 ~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~i-l~~ll~~dligf~~~~~~~~Fl~~ 213 (803)
..+| |+|++|+...+.....+... .+.+..+++|........+. .....+ -..+..+|.+-..+..+.+.+..
T Consensus 81 ~~~~--Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~- 154 (357)
T cd03795 81 AKKA--DVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV- 154 (357)
T ss_pred CCCC--CEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH-
Confidence 4455 89999976544332222222 46778888995432211110 111111 22445678877766655544332
Q ss_pred HHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHH
Q 003682 214 CSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK 293 (803)
Q Consensus 214 ~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~ 293 (803)
+ + ....++.++|+|+|.+.+..... .. ........++++|+++||+.+.||+..+
T Consensus 155 ---~-~---------------~~~~~~~~i~~gi~~~~~~~~~~---~~---~~~~~~~~~~~~i~~~G~~~~~K~~~~l 209 (357)
T cd03795 155 ---L-R---------------RFRDKVRVIPLGLDPARYPRPDA---LE---EAIWRRAAGRPFFLFVGRLVYYKGLDVL 209 (357)
T ss_pred ---h-c---------------CCccceEEecCCCChhhcCCcch---hh---hHhhcCCCCCcEEEEecccccccCHHHH
Confidence 0 0 01135678899999887753211 10 0111112467899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcc
Q 003682 294 LLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAE 373 (803)
Q Consensus 294 l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Ad 373 (803)
++|++++. ++.|+++|.+ +....+++ ++.+ .+..+-+.+.|.++.+++..+|+.||
T Consensus 210 i~a~~~l~--------~~~l~i~G~g-----~~~~~~~~----~~~~-------~~~~~~V~~~g~v~~~~~~~~~~~ad 265 (357)
T cd03795 210 LEAAAALP--------DAPLVIVGEG-----PLEAELEA----LAAA-------LGLLDRVRFLGRLDDEEKAALLAACD 265 (357)
T ss_pred HHHHHhcc--------CcEEEEEeCC-----hhHHHHHH----HHHh-------cCCcceEEEcCCCCHHHHHHHHHhCC
Confidence 99998763 4558888732 33333333 3322 23334567788999999999999999
Q ss_pred cceeccc--ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC----CCceeCCCCHHHHHHHH
Q 003682 374 CCLVTAV--RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS----GAIRVNPWNIDAVAEAM 447 (803)
Q Consensus 374 v~v~~S~--~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~----~~~lvnP~d~~~~a~ai 447 (803)
++++||. .||||++++|||+| |.|+|+|+.+|..+.+. .|++++|.|+++++++|
T Consensus 266 ~~i~ps~~~~e~~g~~~~Ea~~~-------------------g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i 326 (357)
T cd03795 266 VFVFPSVERSEAFGIVLLEAMAF-------------------GKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAI 326 (357)
T ss_pred EEEeCCcccccccchHHHHHHHc-------------------CCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHH
Confidence 9999996 59999999999999 67799999999888762 38899999999999999
Q ss_pred HHHhCCCHHHHHHHHHHhhcccc
Q 003682 448 DSALGVSDAEKQMRHEKHYRYVS 470 (803)
Q Consensus 448 ~~aL~~~~~er~~r~~~~~~~v~ 470 (803)
.++++.+ +++....+..++++.
T Consensus 327 ~~l~~~~-~~~~~~~~~~~~~~~ 348 (357)
T cd03795 327 RRLLEDP-ELRERLGEAARERAE 348 (357)
T ss_pred HHHHHCH-HHHHHHHHHHHHHHH
Confidence 9999844 445555555555543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.6e-16 Score=176.98 Aligned_cols=190 Identities=15% Similarity=0.124 Sum_probs=136.3
Q ss_pred EEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHH----HHHHHHHHhCCCCCCcEEEE
Q 003682 239 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKL----LAMEQLLSQNPSKRGKIVLV 314 (803)
Q Consensus 239 ~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l----~A~~~ll~~~p~~~~~v~lv 314 (803)
++.++|+|||.+.|.+..... . ....++++|+++||+++.||+..++ +++..+.+++|+++ |+
T Consensus 197 ~v~vipngvd~~~f~~~~~~~------~---~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ 263 (397)
T TIGR03087 197 RITAFPNGVDADFFSPDRDYP------N---PYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FY 263 (397)
T ss_pred CeEEeecccchhhcCCCcccc------C---CCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EE
Confidence 567889999999885321100 0 0013567899999999999999887 56667777888766 88
Q ss_pred EEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceeccc-ccCCCCCceeeee
Q 003682 315 QIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAV-RDGMNLIPYEYII 393 (803)
Q Consensus 315 ~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~-~EG~~lv~~Ea~a 393 (803)
++|.+ +. . +++++.. .+-+.+.|.++ ++..+|+.||++|+||. .||++++++||||
T Consensus 264 ivG~g-----~~-~----~~~~l~~-----------~~~V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma 320 (397)
T TIGR03087 264 IVGAK-----PS-P----AVRALAA-----------LPGVTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMA 320 (397)
T ss_pred EECCC-----Ch-H----HHHHhcc-----------CCCeEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHH
Confidence 88843 22 1 2222211 12245667776 68999999999999996 5999999999999
Q ss_pred eecCCcccccccCCCCCCCCCceEEecccccccccC--CCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-c
Q 003682 394 CRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL--SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-S 470 (803)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l--~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~ 470 (803)
| |.|+|+|..++..... +.|+++. .|++++|++|.++++. ++.+....++.++++ .
T Consensus 321 ~-------------------G~PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~~-~~~~~~~~~~ar~~v~~ 379 (397)
T TIGR03087 321 M-------------------AKPVVASPEAAEGIDALPGAELLVA-ADPADFAAAILALLAN-PAEREELGQAARRRVLQ 379 (397)
T ss_pred c-------------------CCCEEecCcccccccccCCcceEeC-CCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHH
Confidence 9 6679999864322111 3478885 8999999999999974 455566667777776 4
Q ss_pred cCCHHHHHHHHHHHH
Q 003682 471 THDVAYWARSFLQDL 485 (803)
Q Consensus 471 ~~~~~~W~~~~l~~l 485 (803)
.+++...++++.+-+
T Consensus 380 ~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 380 HYHWPRNLARLDALL 394 (397)
T ss_pred hCCHHHHHHHHHHHh
Confidence 689998888876654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=9e-17 Score=175.55 Aligned_cols=247 Identities=16% Similarity=0.083 Sum_probs=164.9
Q ss_pred HHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHH
Q 003682 132 VMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFL 211 (803)
Q Consensus 132 i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl 211 (803)
+++..++ |+|++|+....++ + .+..+.|+.+.+|..++.... .........+.+-.-+....+.+.
T Consensus 82 ~~~~~~~--Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~ 147 (335)
T cd03802 82 ALAAGDF--DIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP 147 (335)
T ss_pred HHhcCCC--CEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc
Confidence 3445566 9999999887776 2 234567899999977653221 122233334433332222221110
Q ss_pred HHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHH
Q 003682 212 SCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGIS 291 (803)
Q Consensus 212 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~ 291 (803)
. . .++.++|+|+|++.|... ..++.+|+++||+.+.||+.
T Consensus 148 --------------------~---~-~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~ 187 (335)
T cd03802 148 --------------------P---L-PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPH 187 (335)
T ss_pred --------------------c---c-cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHH
Confidence 0 0 356789999999887520 13466899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHh
Q 003682 292 LKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVI 371 (803)
Q Consensus 292 ~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~ 371 (803)
.+++|+++ ++ +.|+++|... ....+...+.+... ..+.+.+.|.++.+++..+|+.
T Consensus 188 ~li~~~~~-----~~----~~l~i~G~~~-----~~~~~~~~~~~~~~----------~~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 188 LAIRAARR-----AG----IPLKLAGPVS-----DPDYFYREIAPELL----------DGPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred HHHHHHHh-----cC----CeEEEEeCCC-----CHHHHHHHHHHhcc----------cCCcEEEeCCCCHHHHHHHHHh
Confidence 99999754 23 3488888432 11122222222100 1134567789999999999999
Q ss_pred cccceeccc-ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHH
Q 003682 372 AECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAM 447 (803)
Q Consensus 372 Adv~v~~S~-~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai 447 (803)
||++++||. .||||++++||||| |.|+|+|+.+|..+.+. +|+++++ +++++++|
T Consensus 244 ~d~~v~ps~~~E~~~~~~lEAma~-------------------G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l 302 (335)
T cd03802 244 ARALLFPILWEEPFGLVMIEAMAC-------------------GTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAV 302 (335)
T ss_pred CcEEEeCCcccCCcchHHHHHHhc-------------------CCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHH
Confidence 999999997 59999999999999 67899999999998883 4789987 99999999
Q ss_pred HHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHH
Q 003682 448 DSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQ 483 (803)
Q Consensus 448 ~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 483 (803)
.+++..+.+..+ .....++++..-++++++
T Consensus 303 ~~l~~~~~~~~~------~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 303 ARADRLDRAACR------RRAERRFSAARMVDDYLA 332 (335)
T ss_pred HHHhccHHHHHH------HHHHHhCCHHHHHHHHHH
Confidence 998765432111 111255777777766655
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.8e-17 Score=176.88 Aligned_cols=247 Identities=18% Similarity=0.159 Sum_probs=165.8
Q ss_pred hhcCCCCCeEEEeCc-cccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHHHH
Q 003682 134 EVISPDDDFVWVHDY-HLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLS 212 (803)
Q Consensus 134 ~~~~~~~d~iwihDy-hl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~Fl~ 212 (803)
+..+| |+|++|++ ...++..+ ..+. +.++.+.+|..++...... .+........+..+|.+-+.+....+.+..
T Consensus 78 ~~~~~--dii~~~~~~~~~~~~~~-~~~~-~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 152 (353)
T cd03811 78 RKEKP--DVVISHLTTTPNVLALL-AARL-GTKLIVWEHNSLSLELKRK-LRLLLLIRKLYRRADKIVAVSEGVKEDLLK 152 (353)
T ss_pred HhcCC--CEEEEcCccchhHHHHH-Hhhc-CCceEEEEcCcchhhhccc-hhHHHHHHhhccccceEEEeccchhhhHHH
Confidence 34466 99999988 44444443 3333 7899999998776432211 111112233455678887777665555443
Q ss_pred HHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHH
Q 003682 213 CCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISL 292 (803)
Q Consensus 213 ~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~ 292 (803)
.. + ....++.++|+|+|.+.+..... ... ......++.+|+++||+.+.||+..
T Consensus 153 ~~----~---------------~~~~~~~vi~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~i~~~g~~~~~k~~~~ 206 (353)
T cd03811 153 LL----G---------------IPPDKIEVIYNPIDIEEIRALAE-----EPL--ELGIPPDGPVILAVGRLSPQKGFDT 206 (353)
T ss_pred hh----c---------------CCccccEEecCCcChhhcCcccc-----hhh--hcCCCCCceEEEEEecchhhcChHH
Confidence 11 1 01236678899999887753211 000 0011256789999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhc
Q 003682 293 KLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIA 372 (803)
Q Consensus 293 ~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~A 372 (803)
+++|++.+.+++|+++ |+++|.+ +...++++ ++.+. +..+.+.+.+.. +++..+|+.|
T Consensus 207 ~i~~~~~l~~~~~~~~----l~i~G~~-----~~~~~~~~----~~~~~-------~~~~~v~~~g~~--~~~~~~~~~~ 264 (353)
T cd03811 207 LIRAFALLRKEGPDAR----LVILGDG-----PLREELEA----LAKEL-------GLADRVHFLGFQ--SNPYPYLKAA 264 (353)
T ss_pred HHHHHHHhhhcCCCce----EEEEcCC-----ccHHHHHH----HHHhc-------CCCccEEEeccc--CCHHHHHHhC
Confidence 9999999988766655 8877732 23333333 33332 223345556554 4788999999
Q ss_pred ccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHH
Q 003682 373 ECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDS 449 (803)
Q Consensus 373 dv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~ 449 (803)
|+++.||..||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|.+++++.+..
T Consensus 265 d~~i~ps~~e~~~~~~~Ea~~~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~ 325 (353)
T cd03811 265 DLFVLSSRYEGFPNVLLEAMAL-------------------GTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALA 325 (353)
T ss_pred CEEEeCcccCCCCcHHHHHHHh-------------------CCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHH
Confidence 9999999999999999999999 67899999999998883 4899999999999544444
Q ss_pred HhC
Q 003682 450 ALG 452 (803)
Q Consensus 450 aL~ 452 (803)
+..
T Consensus 326 i~~ 328 (353)
T cd03811 326 LLD 328 (353)
T ss_pred HHh
Confidence 433
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.1e-16 Score=174.65 Aligned_cols=191 Identities=13% Similarity=0.035 Sum_probs=139.7
Q ss_pred eEecccCChhHHHHHhCCchHHHHHHHHHHHh--CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 003682 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIAN 318 (803)
Q Consensus 241 ~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~--~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~ 318 (803)
.++|+|+|...+.. ....++.+ .+++.++++||+.+.||+..+++|+.++.. ++.|+++|.
T Consensus 167 ~~i~ngv~~~~~~~----------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~-------~~~l~ivG~ 229 (363)
T cd04955 167 TYIPYGADHVVSSE----------EDEILKKYGLEPGRYYLLVGRIVPENNIDDLIEAFSKSNS-------GKKLVIVGN 229 (363)
T ss_pred eeeCCCcChhhcch----------hhhhHHhcCCCCCcEEEEEecccccCCHHHHHHHHHhhcc-------CceEEEEcC
Confidence 57899999876542 01112222 345678899999999999999999987632 355888885
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccc-cCCCCCceeeeeeecC
Q 003682 319 PARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVR-DGMNLIPYEYIICRQG 397 (803)
Q Consensus 319 ~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~-EG~~lv~~Ea~a~~~~ 397 (803)
++ ...++.+.+.+ + .+..+.+.+.|.++.+++..+|+.||++++||.. ||||++++|||+|
T Consensus 230 ~~-----~~~~~~~~~~~---~-------~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~--- 291 (363)
T cd04955 230 AD-----HNTPYGKLLKE---K-------AAADPRIIFVGPIYDQELLELLRYAALFYLHGHSVGGTNPSLLEAMAY--- 291 (363)
T ss_pred CC-----CcchHHHHHHH---H-------hCCCCcEEEccccChHHHHHHHHhCCEEEeCCccCCCCChHHHHHHHc---
Confidence 43 11223333332 1 1112345677899999999999999999999999 9999999999999
Q ss_pred CcccccccCCCCCCCCCceEEecccccccccC-CCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccc-cCCHH
Q 003682 398 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVS-THDVA 475 (803)
Q Consensus 398 ~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~-~~~~~ 475 (803)
|.|+|+|+.+|..+.+ .+|.+++|.|. ++++|.+++..++. +....+..++.+. .+++.
T Consensus 292 ----------------G~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~~~~~~-~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 292 ----------------GCPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELEADPEE-VSAMAKAARERIREKYTWE 352 (363)
T ss_pred ----------------CCCEEEecCCccceeecCCeeEecCchH--HHHHHHHHHhCHHH-HHHHHHHHHHHHHHhCCHH
Confidence 6789999999988888 45888888776 99999999986643 4444455555554 48888
Q ss_pred HHHHHHHHHH
Q 003682 476 YWARSFLQDL 485 (803)
Q Consensus 476 ~W~~~~l~~l 485 (803)
.-++++++.+
T Consensus 353 ~~~~~~~~~y 362 (363)
T cd04955 353 KIADQYEELY 362 (363)
T ss_pred HHHHHHHHHh
Confidence 8888877643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.6e-17 Score=177.20 Aligned_cols=170 Identities=16% Similarity=0.210 Sum_probs=127.1
Q ss_pred eEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 003682 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPA 320 (803)
Q Consensus 241 ~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~ 320 (803)
.++|+|+|.+.|.... ..+++++++||+.+.||+..+++|++++ | ++ |+++|.
T Consensus 177 ~vi~~~~d~~~~~~~~----------------~~~~~il~~G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-- 229 (351)
T cd03804 177 TVIYPPVDTDRFTPAE----------------EKEDYYLSVGRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-- 229 (351)
T ss_pred EEECCCCCHhhcCcCC----------------CCCCEEEEEEcCccccChHHHHHHHHHC----C-Cc----EEEEEC--
Confidence 4678999988775211 2345799999999999999999999865 3 33 777773
Q ss_pred CCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcc
Q 003682 321 RGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEK 400 (803)
Q Consensus 321 ~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~ 400 (803)
+++.+++++ . ..+.+.+.|.++.+++.++|+.||++++||. ||||++++|||||
T Consensus 230 ---g~~~~~l~~-------~---------~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~------ 283 (351)
T cd03804 230 ---GPELDRLRA-------K---------AGPNVTFLGRVSDEELRDLYARARAFLFPAE-EDFGIVPVEAMAS------ 283 (351)
T ss_pred ---ChhHHHHHh-------h---------cCCCEEEecCCCHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHc------
Confidence 333333332 1 0123566779999999999999999999999 9999999999999
Q ss_pred cccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHH
Q 003682 401 LDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYW 477 (803)
Q Consensus 401 ~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W 477 (803)
|.|+|+|..+|..+.+. .|++++|.|++++|++|.++++.+...+. .+++....++..+.
T Consensus 284 -------------G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~~~la~~i~~l~~~~~~~~~----~~~~~~~~~~~~~~ 346 (351)
T cd03804 284 -------------GTPVIAYGKGGALETVIDGVTGILFEEQTVESLAAAVERFEKNEDFDPQ----AIRAHAERFSESRF 346 (351)
T ss_pred -------------CCCEEEeCCCCCcceeeCCCCEEEeCCCCHHHHHHHHHHHHhCcccCHH----HHHHHHHhcCHHHH
Confidence 67899999999888873 48999999999999999999987642222 22333334555555
Q ss_pred HHH
Q 003682 478 ARS 480 (803)
Q Consensus 478 ~~~ 480 (803)
.++
T Consensus 347 ~~~ 349 (351)
T cd03804 347 REK 349 (351)
T ss_pred HHH
Confidence 443
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.1e-16 Score=176.88 Aligned_cols=194 Identities=16% Similarity=0.180 Sum_probs=142.3
Q ss_pred EEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCccc--ccCHHHHHHHHHHHHHh-CCCCCCcE
Q 003682 238 VSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDI--FKGISLKLLAMEQLLSQ-NPSKRGKI 311 (803)
Q Consensus 238 ~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~--~Kgi~~~l~A~~~ll~~-~p~~~~~v 311 (803)
.++.++|+|+|.+.|.+.. . ...++.+ .++.+++.+++... .||+..+++|++.+.++ .| ++
T Consensus 159 ~~~~vi~ngi~~~~~~~~~-----~---~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~----~~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRD-----K---REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKD----DI 226 (365)
T ss_pred CceEEeCCCCcccccCCCc-----H---HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCC----Ce
Confidence 3677899999998774211 1 1223333 35567777767654 89999999999988665 34 45
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCC-HHHHHHHHHhcccceecccccCCCCCcee
Q 003682 312 VLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQ-FYERIAYYVIAECCLVTAVRDGMNLIPYE 390 (803)
Q Consensus 312 ~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~-~~~l~aly~~Adv~v~~S~~EG~~lv~~E 390 (803)
.++++|... .... . +....+.+.|.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~~~--~----------------~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEIP--P----------------DLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhhh--c----------------cCCCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 588777432 1000 0 0112345667777 88999999999999999999999999999
Q ss_pred eeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhc
Q 003682 391 YIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYR 467 (803)
Q Consensus 391 a~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~ 467 (803)
||+| |.|+|+|+.+|..+.+. .|+++++.|+++++++|.+++..+ +++....+..++
T Consensus 284 am~~-------------------g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~ 343 (365)
T cd03825 284 ALAC-------------------GTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADP-DEREELGEAARE 343 (365)
T ss_pred HHhc-------------------CCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHH
Confidence 9999 67899999999888883 489999999999999999999744 444455555566
Q ss_pred cc-ccCCHHHHHHHHHHHHH
Q 003682 468 YV-STHDVAYWARSFLQDLE 486 (803)
Q Consensus 468 ~v-~~~~~~~W~~~~l~~l~ 486 (803)
++ ..+++...++++++.++
T Consensus 344 ~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 344 LAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHhcCHHHHHHHHHHHHh
Confidence 55 45888888888877654
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.9e-16 Score=174.70 Aligned_cols=240 Identities=10% Similarity=-0.002 Sum_probs=155.6
Q ss_pred hcCCCCCeEEEeCccccc--hHHHHHhhCCCCeEEEEEecCCCChhhhhc-C---CC----cHHHHHH-HhcCCEEeccC
Q 003682 135 VISPDDDFVWVHDYHLMV--LPTFLRKRFNRVKLGFFLHSPFPSSEIYRT-L---PI----RDELLRA-LLNADLIGFHT 203 (803)
Q Consensus 135 ~~~~~~d~iwihDyhl~l--lp~~lr~~~~~~~i~~flH~pfP~~~~~~~-l---p~----~~~il~~-ll~~dligf~~ 203 (803)
..+| |+|++|..+.+. +++.+..+..+.|+.+.+|..+.. .+.. . +. ...+-+. .-.+|.|-..+
T Consensus 98 ~~~~--DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S 173 (371)
T PLN02275 98 IPRP--DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVT 173 (371)
T ss_pred CCCC--CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECC
Confidence 3466 999999877533 344443444467898899965311 1100 0 00 0111111 12356666666
Q ss_pred HhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecC
Q 003682 204 FDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDD 283 (803)
Q Consensus 204 ~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~R 283 (803)
....+...+ . .|.. +.++|+| +.+.|.+... . ..++ .+...+++++||
T Consensus 174 ~~~~~~l~~----~----------------~g~~--i~vi~n~-~~~~f~~~~~---~----~~~~--~~~~~~i~~~gr 221 (371)
T PLN02275 174 KAMQHELDQ----N----------------WGIR--ATVLYDQ-PPEFFRPASL---E----IRLR--PNRPALVVSSTS 221 (371)
T ss_pred HHHHHHHHH----h----------------cCCC--eEEECCC-CHHHcCcCCc---h----hccc--CCCcEEEEEeCc
Confidence 544443321 0 0111 5677888 4566643211 0 0111 134567889999
Q ss_pred cccccCHHHHHHHHHHHHH-----------------hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccC
Q 003682 284 MDIFKGISLKLLAMEQLLS-----------------QNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFG 346 (803)
Q Consensus 284 ld~~Kgi~~~l~A~~~ll~-----------------~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~ 346 (803)
+.+.||+..+++|+..+.. ++|+ +.|+++| +|++.+++++.+++
T Consensus 222 l~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~~~~~~---------- 282 (371)
T PLN02275 222 WTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKAMYEEKISR---------- 282 (371)
T ss_pred eeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHHHHHHHHHH----------
Confidence 9999999999999988753 2444 5588888 44554555554443
Q ss_pred CCCcccEEEecCCCCHHHHHHHHHhcccceecc---cccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccc
Q 003682 347 RPGYQPVVLIDTPLQFYERIAYYVIAECCLVTA---VRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV 423 (803)
Q Consensus 347 ~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S---~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~ 423 (803)
.+...++++.+.++.++++.+|+.||+||+|+ ..||||++++||||| |.|+|+|..+
T Consensus 283 -~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~-------------------G~PVVa~~~g 342 (371)
T PLN02275 283 -LNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGC-------------------GLPVCAVSYS 342 (371)
T ss_pred -cCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHC-------------------CCCEEEecCC
Confidence 33445777777889999999999999999753 248999999999999 6789999999
Q ss_pred cccccCC---CCceeCCCCHHHHHHHHHHHh
Q 003682 424 GCSPSLS---GAIRVNPWNIDAVAEAMDSAL 451 (803)
Q Consensus 424 G~~~~l~---~~~lvnP~d~~~~a~ai~~aL 451 (803)
|..+.+. +|++|+ |++++|++|.++|
T Consensus 343 g~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 343 CIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred ChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 9888883 488996 6999999998875
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=170.87 Aligned_cols=316 Identities=19% Similarity=0.172 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHHHHHHhh---cCCCCCeEEEeCccccchHHHHHhh---CCCCeEEEEEecC-----CC-ChhhhhcCCC
Q 003682 118 WQAYVSVNKIFADKVMEV---ISPDDDFVWVHDYHLMVLPTFLRKR---FNRVKLGFFLHSP-----FP-SSEIYRTLPI 185 (803)
Q Consensus 118 w~~Y~~vN~~fa~~i~~~---~~~~~d~iwihDyhl~llp~~lr~~---~~~~~i~~flH~p-----fP-~~~~~~~lp~ 185 (803)
+.-+....++-++-+-.. ..| |+|++||||.-|+|.++++. ...++..|+.|-= |+ ...-...||.
T Consensus 108 ~~Rf~~F~~a~~~~~~~~~~~~~p--DIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~ 185 (487)
T COG0297 108 AERFAFFSLAAAELAPLGLISWLP--DIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPF 185 (487)
T ss_pred HHHHHHHHHHHHHHhhhcCCCCCC--CEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCH
Confidence 444554444444433111 245 99999999999999999996 6789999999932 23 1112223441
Q ss_pred ------------c-HHHHHHHhcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHH
Q 003682 186 ------------R-DELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQL 252 (803)
Q Consensus 186 ------------~-~~il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f 252 (803)
. .-+-.|+..+|.|.--++.|++.-... ..|.. -.|. +.+ +..++.-+=+|||.+.+
T Consensus 186 ~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~---~~g~g---l~g~--l~~--~~~~l~GI~NgiD~~~w 255 (487)
T COG0297 186 EAYASFGLEFYGQISFLKGGLYYADAVTTVSPTYAGEIYTP---EYGEG---LEGL--LSW--RSGKLSGILNGIDYDLW 255 (487)
T ss_pred HHhhhceeeecCcchhhhhhheeccEEEEECHHHHHhhccc---ccccc---chhh--hhh--ccccEEEEEeeEEeccc
Confidence 1 222335677787777777777654410 00000 0010 111 11355556677777766
Q ss_pred HHHhCC-------ch----HHHHHHHHHHHh-----CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 003682 253 QSVLNL-------PE----TEAKVAELQDQF-----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQI 316 (803)
Q Consensus 253 ~~~~~~-------~~----~~~~~~~l~~~~-----~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i 316 (803)
.+.... .+ ..+....+++.+ .+.+++..|+|++..||++.+++|+..++++. ++ +|++
T Consensus 256 np~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vil 329 (487)
T COG0297 256 NPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLL 329 (487)
T ss_pred CcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEE
Confidence 432211 01 112223445555 25699999999999999999999999999987 44 7777
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeec
Q 003682 317 ANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQ 396 (803)
Q Consensus 317 ~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~ 396 (803)
|.+ ...++..+..++.++.++ +.+.-..+..-...+|..||++++||..|++||+-++||.-
T Consensus 330 G~g-------d~~le~~~~~la~~~~~~---------~~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry-- 391 (487)
T COG0297 330 GTG-------DPELEEALRALASRHPGR---------VLVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY-- 391 (487)
T ss_pred ecC-------cHHHHHHHHHHHHhcCce---------EEEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc--
Confidence 743 135777777777776543 22333455666679999999999999999999999999997
Q ss_pred CCcccccccCCCCCCCCCceEEecccccccccCC-----------CCceeCCCCHHHHHHHHHHHhCC---CHH-HHHHH
Q 003682 397 GNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-----------GAIRVNPWNIDAVAEAMDSALGV---SDA-EKQMR 461 (803)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~-----------~~~lvnP~d~~~~a~ai~~aL~~---~~~-er~~r 461 (803)
|+++|+.+.+|.++.+. .|+++.|.+.++++.+|.+|+.. ++. .|..+
T Consensus 392 -----------------GtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~ 454 (487)
T COG0297 392 -----------------GTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQ 454 (487)
T ss_pred -----------------CCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 78999999999999883 27888888999999999999965 333 23333
Q ss_pred HHHhhcccccCCHHHHHHHHHHHHHHHH
Q 003682 462 HEKHYRYVSTHDVAYWARSFLQDLERAC 489 (803)
Q Consensus 462 ~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 489 (803)
..++. ..++++.=++++.+-.+...
T Consensus 455 ~~~m~---~d~sw~~sa~~y~~lY~~~~ 479 (487)
T COG0297 455 PNAMG---ADFSWDLSAKEYVELYKPLL 479 (487)
T ss_pred Hhhcc---cccCchhHHHHHHHHHHHHh
Confidence 33333 45666777777766655543
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=4e-15 Score=168.83 Aligned_cols=287 Identities=18% Similarity=0.186 Sum_probs=175.8
Q ss_pred HHHHHHhhcCCCCCeEEEeCccccchHHHHHh-hCCCCeEEEEEecCCCC-hhhhhcCCCcHHHHHHHh-cCCEEeccCH
Q 003682 128 FADKVMEVISPDDDFVWVHDYHLMVLPTFLRK-RFNRVKLGFFLHSPFPS-SEIYRTLPIRDELLRALL-NADLIGFHTF 204 (803)
Q Consensus 128 fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~-~~~~~~i~~flH~pfP~-~~~~~~lp~~~~il~~ll-~~dligf~~~ 204 (803)
...++++..+| |+|++|.+.++ |.++.. +..++|+.+..|.-.+. ...|+.+ ..+.+.++ .+|.|..++.
T Consensus 115 ~~~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~ 187 (425)
T PRK05749 115 AVRRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSE 187 (425)
T ss_pred HHHHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCH
Confidence 44445677888 89999988765 555543 33457777766543322 2222212 22333332 4799988888
Q ss_pred hhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh-CCCEEEEeecC
Q 003682 205 DYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDD 283 (803)
Q Consensus 205 ~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~-~~~~iil~V~R 283 (803)
...+.+.. +|+. .. +.++|++ +.+.+.. +........+++.+ +++++++++++
T Consensus 188 ~~~~~l~~-----~g~~---------------~~-i~vi~n~-~~d~~~~----~~~~~~~~~~r~~~~~~~~vil~~~~ 241 (425)
T PRK05749 188 EDAERFLA-----LGAK---------------NE-VTVTGNL-KFDIEVP----PELAARAATLRRQLAPNRPVWIAAST 241 (425)
T ss_pred HHHHHHHH-----cCCC---------------CC-cEecccc-cccCCCC----hhhHHHHHHHHHHhcCCCcEEEEeCC
Confidence 88877664 2321 11 2344542 2221110 11112234456666 67788999987
Q ss_pred cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhH-HHHHHHHHHHHHHHhcc---cCCC---CcccEEEe
Q 003682 284 MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDV-QEVQSETHATVRRINKI---FGRP---GYQPVVLI 356 (803)
Q Consensus 284 ld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~-~~l~~~v~~lv~~in~~---~~~~---~~~~v~~~ 356 (803)
. .|+...+++||+++.+++|+++ |+++| ++++. +++++.+ .+.+-. +... .-...+++
T Consensus 242 ~--~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r~~~l~~~~----~~~gl~~~~~~~~~~~~~~~~v~l 306 (425)
T PRK05749 242 H--EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPERFKEVEELL----KKAGLSYVRRSQGEPPSADTDVLL 306 (425)
T ss_pred C--chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhhHHHHHHHH----HhCCCcEEEccCCCCCCCCCcEEE
Confidence 5 6889999999999998888765 77776 34443 3444443 332211 1000 00012344
Q ss_pred cCCCCHHHHHHHHHhccccee-cccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccc----ccccC-C
Q 003682 357 DTPLQFYERIAYYVIAECCLV-TAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG----CSPSL-S 430 (803)
Q Consensus 357 ~~~~~~~~l~aly~~Adv~v~-~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G----~~~~l-~ 430 (803)
.+ +..++..+|+.||++++ +|+.||+|++++||||| |.|+|++...| ..+.+ .
T Consensus 307 ~~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~-------------------G~PVI~g~~~~~~~e~~~~~~~ 365 (425)
T PRK05749 307 GD--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAF-------------------GVPVISGPHTFNFKEIFERLLQ 365 (425)
T ss_pred Ee--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHh-------------------CCCEEECCCccCHHHHHHHHHH
Confidence 33 36799999999999655 78889999999999999 66788876543 23333 4
Q ss_pred CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHH
Q 003682 431 GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLE 486 (803)
Q Consensus 431 ~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 486 (803)
+|.++.|.|++++|++|.++++ +++.+....++.++++.++. .-.+++++.+.
T Consensus 366 ~g~~~~~~d~~~La~~l~~ll~-~~~~~~~m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 366 AGAAIQVEDAEDLAKAVTYLLT-DPDARQAYGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred CCCeEEECCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 6888889999999999999997 45556666677777776552 33344444444
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.2e-16 Score=153.65 Aligned_cols=143 Identities=19% Similarity=0.320 Sum_probs=112.2
Q ss_pred CCCEEEEeecCcccccCHHHHHHHHHHHHHh-CCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcc
Q 003682 273 KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQ-NPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 351 (803)
Q Consensus 273 ~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~-~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~ 351 (803)
.++++|+++||+++.||+..+++|+..+.++ .|++ .|+++|. ++....+... +... +..
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~----~l~i~G~-----~~~~~~~~~~----~~~~-------~~~ 72 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNY----KLVIVGD-----GEYKKELKNL----IEKL-------NLK 72 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTE----EEEEESH-----CCHHHHHHHH----HHHT-------TCG
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCe----EEEEEcc-----cccccccccc----cccc-------ccc
Confidence 5789999999999999999999999999875 6654 4887772 2222333333 3332 222
Q ss_pred cEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC-
Q 003682 352 PVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS- 430 (803)
Q Consensus 352 ~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~- 430 (803)
..+.+.+.++.+++.++|+.||++|.||..||+|++++|||+| |.|+|+|+.+|..+.+.
T Consensus 73 ~~i~~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~-------------------g~pvI~~~~~~~~e~~~~ 133 (172)
T PF00534_consen 73 ENIIFLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC-------------------GCPVIASDIGGNNEIIND 133 (172)
T ss_dssp TTEEEEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT-------------------T-EEEEESSTHHHHHSGT
T ss_pred ccccccccccccccccccccceecccccccccccccccccccc-------------------ccceeeccccCCceeecc
Confidence 2334455677899999999999999999999999999999999 77899999999888883
Q ss_pred --CCceeCCCCHHHHHHHHHHHhCCC
Q 003682 431 --GAIRVNPWNIDAVAEAMDSALGVS 454 (803)
Q Consensus 431 --~~~lvnP~d~~~~a~ai~~aL~~~ 454 (803)
.|++++|.|+++++++|.+++.++
T Consensus 134 ~~~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 134 GVNGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp TTSEEEESTTSHHHHHHHHHHHHHHH
T ss_pred ccceEEeCCCCHHHHHHHHHHHHCCH
Confidence 368999999999999999999866
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.2e-15 Score=155.56 Aligned_cols=190 Identities=16% Similarity=0.169 Sum_probs=146.6
Q ss_pred HHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh-CCCEEEEeecCcccccCH
Q 003682 212 SCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF-KGQIVMLGVDDMDIFKGI 290 (803)
Q Consensus 212 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~-~~~~iil~V~Rld~~Kgi 290 (803)
....|++.+++.++.+.+ +.-.-...++.++|+-++++.|.+.... +. .+...|+.++||-+.||+
T Consensus 144 ~~id~~IcVshtskentv-lr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGi 210 (426)
T KOG1111|consen 144 ANIDRIICVSHTSKENTV-LRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGI 210 (426)
T ss_pred cCCCcEEEEeecCCCceE-EEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccch
Confidence 334555667776665432 3333344588999999999999853321 22 345889999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 370 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~ 370 (803)
+.++.+..++.+++|+.+ ++++| +||....+++.+++. ..+..+.+.|.++++++...|.
T Consensus 211 Dll~~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~-----------~l~~rV~~lG~v~h~~Vr~vl~ 270 (426)
T KOG1111|consen 211 DLLLEIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL-----------FLQDRVVMLGTVPHDRVRDVLV 270 (426)
T ss_pred HHHHHHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh-----------hccCceEEecccchHHHHHHHh
Confidence 999999999999999987 88777 566555566555552 2233456777999999999999
Q ss_pred hcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCCCC-ceeCCCCHHHHHHHHHH
Q 003682 371 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGA-IRVNPWNIDAVAEAMDS 449 (803)
Q Consensus 371 ~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~-~lvnP~d~~~~a~ai~~ 449 (803)
..|||+.||+.|.|+++++||+.| |-++|.+..+|..+.|... +..-+-+++++++++.+
T Consensus 271 ~G~IFlntSlTEafc~~ivEAaSc-------------------GL~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ 331 (426)
T KOG1111|consen 271 RGDIFLNTSLTEAFCMVIVEAASC-------------------GLPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEK 331 (426)
T ss_pred cCcEEeccHHHHHHHHHHHHHHhC-------------------CCEEEEeecCCccccCCccceeccCCChHHHHHHHHH
Confidence 999999999999999999999999 5568999999999999554 43455578889998888
Q ss_pred HhCC
Q 003682 450 ALGV 453 (803)
Q Consensus 450 aL~~ 453 (803)
+++.
T Consensus 332 ai~~ 335 (426)
T KOG1111|consen 332 AITK 335 (426)
T ss_pred HHHH
Confidence 8863
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.5e-14 Score=136.94 Aligned_cols=198 Identities=21% Similarity=0.226 Sum_probs=123.4
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC--CCCcEEecCcEEEEeCC
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC--EGLGIAAEHGYFVRPNY 607 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l--~~l~lia~nGa~i~~~~ 607 (803)
.++++||+|+||||++++ -+.. .....|.+| ++.|..|++||..+..++..+-..+ +.+++++|||+.|+.+.
T Consensus 5 ~~~~lIFtDlD~TLl~~~-ye~~---pA~pv~~el-~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHS-YEWQ---PAAPVLLEL-KDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred ccceEEEEcccCcccCCC-CCCC---ccchHHHHH-HHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 367999999999999932 2233 344556666 7779999999999999998887765 56889999999998764
Q ss_pred ceeEEeecC--------------CCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCcc-------------
Q 003682 608 GVDWETCVS--------------VPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDF------------- 660 (803)
Q Consensus 608 ~~~~~~~~~--------------~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~------------- 660 (803)
+ |...-. ..-..+++...++-+.|- -.++...+....-.+....++.
T Consensus 80 ~--~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g----~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti 153 (274)
T COG3769 80 G--WFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFG----FTTFDDVDDEEIAEWTGLPREQAALAMLREYSETI 153 (274)
T ss_pred c--ccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhC----eeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhhe
Confidence 3 222100 000112222222222221 1111110000000000000000
Q ss_pred chhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 661 GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 661 ~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
-.+..++...++...+...++.++.|..+..+......||.|+.++++.+...+. ..-+++.|||.||.+||+.+...
T Consensus 154 ~~rs~d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~-~r~t~~~GDg~nD~Pl~ev~d~A 231 (274)
T COG3769 154 IWRSSDERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGG-ARTTLGLGDGPNDAPLLEVMDYA 231 (274)
T ss_pred eecccchHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhcCc-eeEEEecCCCCCcccHHHhhhhh
Confidence 0011123345566777777899999999999999999999999999997633232 22599999999999999999763
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.2e-13 Score=151.85 Aligned_cols=266 Identities=15% Similarity=0.121 Sum_probs=166.1
Q ss_pred CCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCc-HHHHHHHhcCCEEeccCHhhHHHHHHHHH
Q 003682 137 SPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIR-DELLRALLNADLIGFHTFDYARHFLSCCS 215 (803)
Q Consensus 137 ~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~-~~il~~ll~~dligf~~~~~~~~Fl~~~~ 215 (803)
+.++.++|.+..-...+... .+..++.+-+|-.|+...... +.. ......+-.||+|-..+....+.+..
T Consensus 100 ~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~~--~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~--- 170 (373)
T cd04950 100 GFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGGP--PELLEAERRLLKRADLVFTTSPSLYEAKRR--- 170 (373)
T ss_pred CCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCCC--HHHHHHHHHHHHhCCEEEECCHHHHHHHhh---
Confidence 43347888875544444444 456778888776665432110 100 11223345688887777655543221
Q ss_pred HHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHHHH
Q 003682 216 RMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLL 295 (803)
Q Consensus 216 ~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~ 295 (803)
+ + .++.++|+|+|.+.|......+.. .+.+ ...++++|+++|++.+.+++. +|.
T Consensus 171 -----------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll~ 224 (373)
T cd04950 171 -----------------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LLE 224 (373)
T ss_pred -----------------C-C--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HHH
Confidence 0 1 246679999999999753221110 1111 114678999999999976664 333
Q ss_pred HHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccc
Q 003682 296 AMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECC 375 (803)
Q Consensus 296 A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~ 375 (803)
+ +.+.+|+++ |+++|... ...+ .. .+ . . .+.+.+.|.++.++++++|+.||++
T Consensus 225 ~---la~~~p~~~----~vliG~~~--~~~~---~~----~~----~------~-~~nV~~~G~~~~~~l~~~l~~~Dv~ 277 (373)
T cd04950 225 A---LAKARPDWS----FVLIGPVD--VSID---PS----AL----L------R-LPNVHYLGPKPYKELPAYLAGFDVA 277 (373)
T ss_pred H---HHHHCCCCE----EEEECCCc--CccC---hh----Hh----c------c-CCCEEEeCCCCHHHHHHHHHhCCEE
Confidence 3 334678775 88888431 0011 10 10 0 0 1235567789999999999999999
Q ss_pred eeccc-----ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCCCCceeCCCCHHHHHHHHHHH
Q 003682 376 LVTAV-----RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSA 450 (803)
Q Consensus 376 v~~S~-----~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~a 450 (803)
++|+. ++++++..+||||| |.|||+|...++.+.. ++..+.+.|+++++++|.++
T Consensus 278 l~P~~~~~~~~~~~P~Kl~EylA~-------------------G~PVVat~~~~~~~~~-~~~~~~~~d~~~~~~ai~~~ 337 (373)
T cd04950 278 ILPFRLNELTRATSPLKLFEYLAA-------------------GKPVVATPLPEVRRYE-DEVVLIADDPEEFVAAIEKA 337 (373)
T ss_pred ecCCccchhhhcCCcchHHHHhcc-------------------CCCEEecCcHHHHhhc-CcEEEeCCCHHHHHHHHHHH
Confidence 99985 35789999999999 5679988876554433 34445567999999999998
Q ss_pred hCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHH
Q 003682 451 LGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLER 487 (803)
Q Consensus 451 L~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~ 487 (803)
|..+..++..+.. +...++|++.-++++++.|.+
T Consensus 338 l~~~~~~~~~~~~---~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 338 LLEDGPARERRRL---RLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HhcCCchHHHHHH---HHHHHCCHHHHHHHHHHHHHh
Confidence 7654433332221 257779988888888866553
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.9e-12 Score=139.33 Aligned_cols=191 Identities=14% Similarity=0.158 Sum_probs=124.1
Q ss_pred EEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCcccccCHHHHHHHHHHHHHh----CCCCCCcE
Q 003682 239 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQ----NPSKRGKI 311 (803)
Q Consensus 239 ~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~----~p~~~~~v 311 (803)
++.+++++|+.+.+... . ....+++++ +++++|+.+||....|++..+++++..++.. .|+.+
T Consensus 174 ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~--- 243 (382)
T PLN02605 174 QIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ--- 243 (382)
T ss_pred HEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---
Confidence 45567888886543211 1 112355555 4688999999999999999999999876522 23322
Q ss_pred EEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceee
Q 003682 312 VLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEY 391 (803)
Q Consensus 312 ~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea 391 (803)
.++++| +++ +++++++++.. + ..+ .+.|.++ ++..+|++||++|.+| .|+++.||
T Consensus 244 ~~vi~G-----~~~---~~~~~L~~~~~------~----~~v-~~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 244 VVVICG-----RNK---KLQSKLESRDW------K----IPV-KVRGFVT--NMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred EEEEEC-----CCH---HHHHHHHhhcc------c----CCe-EEEeccc--cHHHHHHhCCEEEECC----CcchHHHH
Confidence 234344 222 23333333200 0 123 4556654 7999999999999865 37899999
Q ss_pred eeeecCCcccccccCCCCCCCCCceEEecccc-----cccccC-CCCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHh
Q 003682 392 IICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV-----GCSPSL-SGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKH 465 (803)
Q Consensus 392 ~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~-----G~~~~l-~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~ 465 (803)
||| |.|+|++... |.++.+ .+|.-+.+.|+++++++|.+++.++++.++.+.+..
T Consensus 299 ma~-------------------g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~ 359 (382)
T PLN02605 299 LIR-------------------GLPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENA 359 (382)
T ss_pred HHc-------------------CCCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999 5679998852 323333 344444568999999999999987566666666777
Q ss_pred hcccccCCHHHHHHHHHH
Q 003682 466 YRYVSTHDVAYWARSFLQ 483 (803)
Q Consensus 466 ~~~v~~~~~~~W~~~~l~ 483 (803)
++....+....-++.+++
T Consensus 360 ~~~~~~~a~~~i~~~l~~ 377 (382)
T PLN02605 360 LKLARPEAVFDIVHDLHE 377 (382)
T ss_pred HHhcCCchHHHHHHHHHH
Confidence 777776766666655543
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.3e-12 Score=142.17 Aligned_cols=186 Identities=12% Similarity=0.106 Sum_probs=143.5
Q ss_pred CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCC-cEEEEEEecC-CCCCchhHHHHHHHHHHHHHHHhcccCCCCcc
Q 003682 274 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRG-KIVLVQIANP-ARGRGRDVQEVQSETHATVRRINKIFGRPGYQ 351 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~-~v~lv~i~~~-~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~ 351 (803)
...++..+.|+.|.||+...|.||..+...-|+..- ...++..|.+ +.+...+..++..++.+++++.+ .+ .
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~-l~-----g 345 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYD-LL-----G 345 (495)
T ss_pred cceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhC-cc-----C
Confidence 378899999999999999999999999888765222 2344444432 43445566677777888877742 11 2
Q ss_pred cEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC--
Q 003682 352 PVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-- 429 (803)
Q Consensus 352 ~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-- 429 (803)
..++|....++.+.+.++..+.+.++++..|.||+|++|||+| |.|+|++..+|..|++
T Consensus 346 ~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~-------------------glPvvAt~~GGP~EiV~~ 406 (495)
T KOG0853|consen 346 QFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMAC-------------------GLPVVATNNGGPAEIVVH 406 (495)
T ss_pred ceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhc-------------------CCCEEEecCCCceEEEEc
Confidence 4677766788888888888888899999899999999999999 5679999999999999
Q ss_pred -CCCceeCCCCHH---HHHHHHHHHhCCCHHHHHHHHHHhhccccc-CCHHHHHHHHHHHHH
Q 003682 430 -SGAIRVNPWNID---AVAEAMDSALGVSDAEKQMRHEKHYRYVST-HDVAYWARSFLQDLE 486 (803)
Q Consensus 430 -~~~~lvnP~d~~---~~a~ai~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l~ 486 (803)
..|++++| +.+ .+|++|.++.+.+.. +....+..+++|.+ +++++..+++.+.+.
T Consensus 407 ~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l-~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 407 GVTGLLIDP-GQEAVAELADALLKLRRDPEL-WARMGKNGLKRVKEMFSWQHYSERIASVLG 466 (495)
T ss_pred CCcceeeCC-chHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHHhHHHHHHHHHHHhH
Confidence 34999999 666 599999999986655 77777788888877 877665555555544
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.29 E-value=6.8e-11 Score=120.75 Aligned_cols=111 Identities=16% Similarity=0.165 Sum_probs=81.4
Q ss_pred eecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCC
Q 003682 280 GVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTP 359 (803)
Q Consensus 280 ~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~ 359 (803)
++||+.+.||+..+++|+..+.+++|+++ ++++|... +.......+.. .+....+.+.+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~-----~~~~~~~~~~~-----------~~~~~~v~~~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP-----EREYLEELLAA-----------LLLLDRVIFLGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC-----ChHHHHHHHHh-----------cCCcccEEEeCC
Confidence 89999999999999999999988887655 88888432 11111111111 111123344445
Q ss_pred C-CHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC
Q 003682 360 L-QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL 429 (803)
Q Consensus 360 ~-~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l 429 (803)
+ +.+++..+++.||+++.||..||++.+++|||+| |.|+|+|+.++..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~-------------------g~pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMAC-------------------GLPVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhC-------------------CCCEEEcCCCCcceEE
Confidence 5 5566667777799999999999999999999999 6789999999988765
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.25 E-value=9.4e-11 Score=126.56 Aligned_cols=198 Identities=18% Similarity=0.255 Sum_probs=141.0
Q ss_pred EEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCC--CEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 003682 239 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKG--QIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQI 316 (803)
Q Consensus 239 ~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~--~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i 316 (803)
.+.+.|.|++++.+.... .....+ ..+++++||+.+.||+...++|+..+.+..++ +.++.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~~ 236 (381)
T COG0438 173 KIVVIPNGIDTEKFAPAR------------IGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVIV 236 (381)
T ss_pred CceEecCCcCHHHcCccc------------cCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEEE
Confidence 556789999998876320 000112 36899999999999999999999999887765 447777
Q ss_pred ecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeec
Q 003682 317 ANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQ 396 (803)
Q Consensus 317 ~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~ 396 (803)
|..... ...+.. ++.+.+. .+.+.+.+.++.+++..+|+.||++++||..||||++++|||+|
T Consensus 237 g~~~~~----~~~~~~----~~~~~~~-------~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~-- 299 (381)
T COG0438 237 GDGPER----REELEK----LAKKLGL-------EDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA-- 299 (381)
T ss_pred cCCCcc----HHHHHH----HHHHhCC-------CCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc--
Confidence 744311 122222 3333221 23445577888889999999999999999999999999999998
Q ss_pred CCcccccccCCCCCCCCCceEEecccccccccCCC---CceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhccc-ccC
Q 003682 397 GNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG---AIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV-STH 472 (803)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~---~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v-~~~ 472 (803)
|.|+|+|...|..+.+.+ |+++++.|.+++++++..++++. +.+.......++.+ ..+
T Consensus 300 -----------------g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~ 361 (381)
T COG0438 300 -----------------GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEEF 361 (381)
T ss_pred -----------------CCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhc
Confidence 567999999998888843 77888888999999999999877 33333333233333 567
Q ss_pred CHHHHHHHHHHHHHH
Q 003682 473 DVAYWARSFLQDLER 487 (803)
Q Consensus 473 ~~~~W~~~~l~~l~~ 487 (803)
++..-++.+.+.+..
T Consensus 362 ~~~~~~~~~~~~~~~ 376 (381)
T COG0438 362 SWERIAEQLLELYEE 376 (381)
T ss_pred CHHHHHHHHHHHHHH
Confidence 777766666555554
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.6e-10 Score=122.55 Aligned_cols=248 Identities=16% Similarity=0.122 Sum_probs=148.7
Q ss_pred HHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHH
Q 003682 129 ADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYAR 208 (803)
Q Consensus 129 a~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~ 208 (803)
+.++++..+| |+|+.|.... .++..+..+..+.|+.++.|..||.. . +.++ ...+|.|...++...+
T Consensus 81 ~~~~i~~~~p--DvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~~~~--~------~~~~--~~~~~~vi~~s~~~~~ 147 (350)
T cd03785 81 ARKILKKFKP--DVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAVPGL--A------NRLL--ARFADRVALSFPETAK 147 (350)
T ss_pred HHHHHHhcCC--CEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCCccH--H------HHHH--HHhhCEEEEcchhhhh
Confidence 3345566677 9999987654 34444544555677776555544421 0 1111 1125666555443222
Q ss_pred HHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCEEEEeecCcc
Q 003682 209 HFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMD 285 (803)
Q Consensus 209 ~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~iil~V~Rld 285 (803)
. -...++.++|+|+|.+.+... + . ++++ +++++|+.+++..
T Consensus 148 ~-------------------------~~~~~~~~i~n~v~~~~~~~~---~----~----~~~~~~~~~~~~i~~~~g~~ 191 (350)
T cd03785 148 Y-------------------------FPKDKAVVTGNPVREEILALD---R----E----RARLGLRPGKPTLLVFGGSQ 191 (350)
T ss_pred c-------------------------CCCCcEEEECCCCchHHhhhh---h----h----HHhcCCCCCCeEEEEECCcH
Confidence 1 011256678999998876521 1 0 2222 4677888999888
Q ss_pred cccCHHHHH-HHHHHHHHhCCCCCCcEEEE-EEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHH
Q 003682 286 IFKGISLKL-LAMEQLLSQNPSKRGKIVLV-QIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFY 363 (803)
Q Consensus 286 ~~Kgi~~~l-~A~~~ll~~~p~~~~~v~lv-~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~ 363 (803)
..|+...++ +|++.+. + ++ +.++ ++| ++ +.+++++.++++ + +.+.+.+.+ +
T Consensus 192 ~~~~~~~~l~~a~~~l~-~-~~----~~~~~i~G-----~g-~~~~l~~~~~~~--------~-----~~v~~~g~~--~ 244 (350)
T cd03785 192 GARAINEAVPEALAELL-R-KR----LQVIHQTG-----KG-DLEEVKKAYEEL--------G-----VNYEVFPFI--D 244 (350)
T ss_pred hHHHHHHHHHHHHHHhh-c-cC----eEEEEEcC-----Cc-cHHHHHHHHhcc--------C-----CCeEEeehh--h
Confidence 888887654 7776663 2 22 3333 344 22 233444433321 1 123455544 7
Q ss_pred HHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccc--------ccccC---CCC
Q 003682 364 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG--------CSPSL---SGA 432 (803)
Q Consensus 364 ~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G--------~~~~l---~~~ 432 (803)
++..+|+.||+++.+| | +.+++|||+| |.|+|++...| .++.+ ..|
T Consensus 245 ~~~~~l~~ad~~v~~s---g-~~t~~Eam~~-------------------G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g 301 (350)
T cd03785 245 DMAAAYAAADLVISRA---G-ASTVAELAAL-------------------GLPAILIPLPYAADDHQTANARALVKAGAA 301 (350)
T ss_pred hHHHHHHhcCEEEECC---C-HhHHHHHHHh-------------------CCCEEEeecCCCCCCcHHHhHHHHHhCCCE
Confidence 8999999999999876 3 5789999999 55688876543 12334 347
Q ss_pred ceeCCC--CHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHH
Q 003682 433 IRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAY 476 (803)
Q Consensus 433 ~lvnP~--d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~ 476 (803)
+++++. |.++++++|.+++. +++.+....+..++++..+...+
T Consensus 302 ~~v~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~ 346 (350)
T cd03785 302 VLIPQEELTPERLAAALLELLS-DPERLKAMAEAARSLARPDAAER 346 (350)
T ss_pred EEEecCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHH
Confidence 899887 89999999999996 45555555666666666554443
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.20 E-value=1e-09 Score=121.93 Aligned_cols=251 Identities=14% Similarity=0.120 Sum_probs=144.1
Q ss_pred HHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHh--cCCEEeccC
Q 003682 126 KIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL--NADLIGFHT 203 (803)
Q Consensus 126 ~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll--~~dligf~~ 203 (803)
..+++.+ +..+| |+|++|......+.+.+-.+..++|+....+-. -+.+.+. |+.+++.+-+. .+|++.-.+
T Consensus 76 ~~l~~~l-~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEELL-LEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHHHH-HHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 4555543 45677 999999655555544444444567776432211 0111111 11122222111 156655556
Q ss_pred HhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccC-ChhHHHHHhCCchHHHHHHHHHHHhC-C-CEEEEe
Q 003682 204 FDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGI-HIGQLQSVLNLPETEAKVAELQDQFK-G-QIVMLG 280 (803)
Q Consensus 204 ~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gi-d~~~f~~~~~~~~~~~~~~~l~~~~~-~-~~iil~ 280 (803)
....+++++ .|. ...+|.++++|+ |...... ... ....++++++ + ..+++.
T Consensus 150 ~~~~~~l~~-----~G~---------------~~~~I~vign~~~d~~~~~~-~~~-----~~~~~~~~~~~~~~~vl~~ 203 (365)
T TIGR00236 150 EQAKDNLLR-----ENV---------------KADSIFVTGNTVIDALLTNV-EIA-----YSSPVLSEFGEDKRYILLT 203 (365)
T ss_pred HHHHHHHHH-----cCC---------------CcccEEEeCChHHHHHHHHH-hhc-----cchhHHHhcCCCCCEEEEe
Confidence 666555543 122 223677888886 4332221 110 1123344442 2 344444
Q ss_pred ecCcc-cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCC
Q 003682 281 VDDMD-IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTP 359 (803)
Q Consensus 281 V~Rld-~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~ 359 (803)
..|.. ..||+..+++|++++.+++|+++ ++.++.|. ++ ...++ ...++ ..+.+.+.+.
T Consensus 204 ~hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~~---~~~~~-------~~~~v~~~~~ 262 (365)
T TIGR00236 204 LHRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREPL---HKHLG-------DSKRVHLIEP 262 (365)
T ss_pred cCchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHHH---HHHhC-------CCCCEEEECC
Confidence 55653 45999999999999988888765 66555332 11 11111 11211 1122455567
Q ss_pred CCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEec-ccccccccCC-C-CceeC
Q 003682 360 LQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS-EFVGCSPSLS-G-AIRVN 436 (803)
Q Consensus 360 ~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S-~~~G~~~~l~-~-~~lvn 436 (803)
++..++..+|+.||+++.+| |.+..|||+| |.|+|++ +.+|..+.+. + ++++
T Consensus 263 ~~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~-------------------g~PvI~~~~~~~~~e~~~~g~~~lv- 317 (365)
T TIGR00236 263 LEYLDFLNLAANSHLILTDS-----GGVQEEAPSL-------------------GKPVLVLRDTTERPETVEAGTNKLV- 317 (365)
T ss_pred CChHHHHHHHHhCCEEEECC-----hhHHHHHHHc-------------------CCCEEECCCCCCChHHHhcCceEEe-
Confidence 88999999999999999888 4457999999 5668885 5555555552 3 5566
Q ss_pred CCCHHHHHHHHHHHhCCC
Q 003682 437 PWNIDAVAEAMDSALGVS 454 (803)
Q Consensus 437 P~d~~~~a~ai~~aL~~~ 454 (803)
|.|+++++++|.+++..+
T Consensus 318 ~~d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 318 GTDKENITKAAKRLLTDP 335 (365)
T ss_pred CCCHHHHHHHHHHHHhCh
Confidence 579999999999998744
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.3e-10 Score=123.88 Aligned_cols=257 Identities=15% Similarity=0.057 Sum_probs=157.3
Q ss_pred HHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhHHHH
Q 003682 131 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHF 210 (803)
Q Consensus 131 ~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~~~F 210 (803)
++++..+| |+|+.|.....+. ..+..+..+.|+.++.|..+|.. .+.++. -.+|.+...+++- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~~-~~~~~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSGP-GGLAARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchhH-HHHHHHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---h
Confidence 44566677 9999998554433 33444555778887766544421 011111 1244443332211 0
Q ss_pred HHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCH
Q 003682 211 LSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 290 (803)
Q Consensus 211 l~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi 290 (803)
. . ....++.++|+|+|.+.+.. +... ..+ ..-++.++|+.+|+....|++
T Consensus 149 ~--------------------~--~~~~~i~vi~n~v~~~~~~~----~~~~---~~~-~~~~~~~~i~~~gg~~~~~~~ 198 (357)
T PRK00726 149 P--------------------E--FFKPKAVVTGNPVREEILAL----AAPP---ARL-AGREGKPTLLVVGGSQGARVL 198 (357)
T ss_pred h--------------------c--cCCCCEEEECCCCChHhhcc----cchh---hhc-cCCCCCeEEEEECCcHhHHHH
Confidence 0 0 11236778999999876542 1110 111 111367889999999999998
Q ss_pred HHHH-HHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHH
Q 003682 291 SLKL-LAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYY 369 (803)
Q Consensus 291 ~~~l-~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly 369 (803)
..++ +|++++.+. | ..++++|.+ +. +++.+.+ . . +.. +.+.+.+ +++..+|
T Consensus 199 ~~~l~~a~~~~~~~-~-----~~~~~~G~g-----~~-~~~~~~~----~-----~---~~~--v~~~g~~--~~~~~~~ 250 (357)
T PRK00726 199 NEAVPEALALLPEA-L-----QVIHQTGKG-----DL-EEVRAAY----A-----A---GIN--AEVVPFI--DDMAAAY 250 (357)
T ss_pred HHHHHHHHHHhhhC-c-----EEEEEcCCC-----cH-HHHHHHh----h-----c---CCc--EEEeehH--hhHHHHH
Confidence 7776 888777432 2 335666632 21 2222221 1 1 111 3455554 6899999
Q ss_pred HhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccc--------cccC---CCCceeCCC
Q 003682 370 VIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC--------SPSL---SGAIRVNPW 438 (803)
Q Consensus 370 ~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~--------~~~l---~~~~lvnP~ 438 (803)
+.||+++.+| | +.+++|||+| |.|+|++...|. ++.+ ..|++++|.
T Consensus 251 ~~~d~~i~~~---g-~~~~~Ea~~~-------------------g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~ 307 (357)
T PRK00726 251 AAADLVICRA---G-ASTVAELAAA-------------------GLPAILVPLPHAADDHQTANARALVDAGAALLIPQS 307 (357)
T ss_pred HhCCEEEECC---C-HHHHHHHHHh-------------------CCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcc
Confidence 9999999877 3 5788999999 556777654321 2334 347889888
Q ss_pred C--HHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHH
Q 003682 439 N--IDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 485 (803)
Q Consensus 439 d--~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 485 (803)
| +++++++|.+++.. ++.++...+..+++....+...-++.+++.+
T Consensus 308 ~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 308 DLTPEKLAEKLLELLSD-PERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred cCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 8 99999999999986 5555666666777777788888887776654
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.2e-09 Score=120.04 Aligned_cols=276 Identities=9% Similarity=0.096 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEe
Q 003682 121 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIG 200 (803)
Q Consensus 121 Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dlig 200 (803)
+...+..-..++++..+| |+|.+| +....++.+.+....++|+.... +.|-....| +.+ .+|.+-
T Consensus 88 ~~~~~~~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~-td~~~~~~~--------~~~---~ad~i~ 152 (380)
T PRK13609 88 YANFGRKRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVL-TDFCLHKIW--------VHR---EVDRYF 152 (380)
T ss_pred HHHHHHHHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEe-CCCCCCccc--------ccC---CCCEEE
Confidence 344444555667777788 899885 55566776666655566765333 222111111 111 478887
Q ss_pred ccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCCE-
Q 003682 201 FHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQI- 276 (803)
Q Consensus 201 f~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~~- 276 (803)
..+....+.+.+ .|+. ..++.++++.++ +.|.... .. ..+++++ ++++
T Consensus 153 ~~s~~~~~~l~~-----~gi~---------------~~ki~v~G~p~~-~~f~~~~---~~----~~~~~~~~l~~~~~~ 204 (380)
T PRK13609 153 VATDHVKKVLVD-----IGVP---------------PEQVVETGIPIR-SSFELKI---NP----DIIYNKYQLCPNKKI 204 (380)
T ss_pred ECCHHHHHHHHH-----cCCC---------------hhHEEEECcccC-hHHcCcC---CH----HHHHHHcCCCCCCcE
Confidence 766554443332 1221 112223333333 2332111 11 1244444 2444
Q ss_pred EEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEe
Q 003682 277 VMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLI 356 (803)
Q Consensus 277 iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~ 356 (803)
+++..|++...||+..+++++.. .|+++ +++++.. +++ +++++++++.+.+ ..+++
T Consensus 205 il~~~G~~~~~k~~~~li~~l~~----~~~~~----~viv~G~---~~~----~~~~l~~~~~~~~--------~~v~~- 260 (380)
T PRK13609 205 LLIMAGAHGVLGNVKELCQSLMS----VPDLQ----VVVVCGK---NEA----LKQSLEDLQETNP--------DALKV- 260 (380)
T ss_pred EEEEcCCCCCCcCHHHHHHHHhh----CCCcE----EEEEeCC---CHH----HHHHHHHHHhcCC--------CcEEE-
Confidence 56667999999999998888742 35443 6666521 122 3334444433211 12444
Q ss_pred cCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecc-ccccc----ccC-C
Q 003682 357 DTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE-FVGCS----PSL-S 430 (803)
Q Consensus 357 ~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~-~~G~~----~~l-~ 430 (803)
.|.+ +++..+|+.||+++. ++.|++++|||+| |.|+|++. ..|.. ..+ .
T Consensus 261 ~g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~-------------------g~PvI~~~~~~g~~~~n~~~~~~ 315 (380)
T PRK13609 261 FGYV--ENIDELFRVTSCMIT----KPGGITLSEAAAL-------------------GVPVILYKPVPGQEKENAMYFER 315 (380)
T ss_pred Eech--hhHHHHHHhccEEEe----CCCchHHHHHHHh-------------------CCCEEECCCCCCcchHHHHHHHh
Confidence 4565 468899999999874 4558999999999 56788876 34421 122 3
Q ss_pred CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHH
Q 003682 431 GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERAC 489 (803)
Q Consensus 431 ~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 489 (803)
.|..+.+.|+++++++|.++++. ++.+..+.+..++....++....++.+++.+....
T Consensus 316 ~G~~~~~~~~~~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~~ 373 (380)
T PRK13609 316 KGAAVVIRDDEEVFAKTEALLQD-DMKLLQMKEAMKSLYLPEPADHIVDDILAENHVEP 373 (380)
T ss_pred CCcEEEECCHHHHHHHHHHHHCC-HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhhh
Confidence 45556678999999999999985 44455555566666677888888888877665543
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.15 E-value=5.3e-10 Score=115.25 Aligned_cols=315 Identities=15% Similarity=0.228 Sum_probs=192.8
Q ss_pred HHhHHHHHHHHHHHHHHHHhh-----cCCCCCeEEEeCcc-ccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHH
Q 003682 115 RSLWQAYVSVNKIFADKVMEV-----ISPDDDFVWVHDYH-LMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDE 188 (803)
Q Consensus 115 ~~~w~~Y~~vN~~fa~~i~~~-----~~~~~d~iwihDyh-l~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~ 188 (803)
...|..+.-.-|..+..|+.. +.| | |||-.-- -+.+|.+-| +.+.||+-+.|-|--+.+....+-.|+.
T Consensus 123 a~~~~hfTllgQaigsmIl~~Eai~r~~P--d-i~IDtMGY~fs~p~~r~--l~~~~V~aYvHYP~iS~DML~~l~qrq~ 197 (465)
T KOG1387|consen 123 ASTWKHFTLLGQAIGSMILAFEAIIRFPP--D-IFIDTMGYPFSYPIFRR--LRRIPVVAYVHYPTISTDMLKKLFQRQK 197 (465)
T ss_pred cccccceehHHHHHHHHHHHHHHHHhCCc--h-heEecCCCcchhHHHHH--HccCceEEEEecccccHHHHHHHHhhhh
Confidence 345666666666666555431 235 3 7775322 223444433 5678999999977666666544433321
Q ss_pred HHHHHhcCCEEeccCHhhHHHHHHHHHHHhCcee------cc-cCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchH
Q 003682 189 LLRALLNADLIGFHTFDYARHFLSCCSRMLGVSY------QS-KRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPET 261 (803)
Q Consensus 189 il~~ll~~dligf~~~~~~~~Fl~~~~~~l~~~~------~~-~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~ 261 (803)
- ++ ...---.|-|-|..-... .|-.. .+ .+..+.-.+..+.+.+ |+|+. +++.+.....+
T Consensus 198 s--~~-----l~~~KlaY~rlFa~lY~~-~G~~ad~vm~NssWT~nHI~qiW~~~~~~i-VyPPC-~~e~lks~~~t--- 264 (465)
T KOG1387|consen 198 S--GI-----LVWGKLAYWRLFALLYQS-AGSKADIVMTNSSWTNNHIKQIWQSNTCSI-VYPPC-STEDLKSKFGT--- 264 (465)
T ss_pred c--ch-----hhhHHHHHHHHHHHHHHh-ccccceEEEecchhhHHHHHHHhhccceeE-EcCCC-CHHHHHHHhcc---
Confidence 1 11 111112344555432111 12110 00 0111111123333333 45543 55544432211
Q ss_pred HHHHHHHHHHhCCCEEEEeecCcccccCHHHHHHHHHHHHHhCCC--CCCcEEEEEEecCCCCCchhHHHHHHHHHHHHH
Q 003682 262 EAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPS--KRGKIVLVQIANPARGRGRDVQEVQSETHATVR 339 (803)
Q Consensus 262 ~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~--~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~ 339 (803)
.-.....+|++|.+.|.|++. .|+-++.++.+.|. ...++.|+++|+ .|+ ++-++..+.++.++.
T Consensus 265 ---------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRn--eeD~ervk~Lkd~a~ 331 (465)
T KOG1387|consen 265 ---------EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRN--EEDEERVKSLKDLAE 331 (465)
T ss_pred ---------cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCC--hhhHHHHHHHHHHHH
Confidence 013457899999999999999 77888888888887 334677887773 333 344455566777777
Q ss_pred HHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEe
Q 003682 340 RINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVV 419 (803)
Q Consensus 340 ~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~ 419 (803)
+++- ..-+.|.-.+|.+++..+|..|-+.+-+-..|-||+.+.||||+ |..+|+
T Consensus 332 ~L~i-------~~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAA-------------------GlIpi~ 385 (465)
T KOG1387|consen 332 ELKI-------PKHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAA-------------------GLIPIV 385 (465)
T ss_pred hcCC-------ccceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhc-------------------CceEEE
Confidence 7553 23355667899999999999999999999999999999999998 233344
Q ss_pred cccccccccC----C---CCceeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHH
Q 003682 420 SEFVGCSPSL----S---GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERA 488 (803)
Q Consensus 420 S~~~G~~~~l----~---~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~ 488 (803)
-..+|..-.+ + .|++. | +.++-|++|.++++++.++|....+..+..+.+++-+...++|.+.+...
T Consensus 386 h~SgGP~lDIV~~~~G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kl 459 (465)
T KOG1387|consen 386 HNSGGPLLDIVTPWDGETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICKL 459 (465)
T ss_pred eCCCCCceeeeeccCCccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHh
Confidence 3444422222 1 26776 3 56789999999999999998887777787888887777777777655543
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.14 E-value=9.1e-10 Score=121.35 Aligned_cols=181 Identities=13% Similarity=0.078 Sum_probs=115.8
Q ss_pred eEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccccCHHHH-HHHHHHHHHhCCCCCCcEEEEEEecC
Q 003682 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLK-LLAMEQLLSQNPSKRGKIVLVQIANP 319 (803)
Q Consensus 241 ~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~Kgi~~~-l~A~~~ll~~~p~~~~~v~lv~i~~~ 319 (803)
.++|+|+|...+... + . ...+ ..-+++++|+++||....|++... +.|++++.+. +++ ++.++
T Consensus 153 ~~i~n~v~~~~~~~~---~-~---~~~~-~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~-- 216 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP---V-P---RERF-GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQT-- 216 (348)
T ss_pred eEEcCCcCHHHhccc---c-h---hhhc-CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEEC--
Confidence 578999997655321 0 0 0111 111467889999999889997764 4788776542 222 33333
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCc
Q 003682 320 ARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNE 399 (803)
Q Consensus 320 ~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~ 399 (803)
|+++. +++++. +.+ .+...++.+. .. ++..+|+.||++|.+| | +.+++|||+|
T Consensus 217 --g~~~~-~~l~~~----~~~-------~~l~~~v~~~---~~-~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~----- 269 (348)
T TIGR01133 217 --GKNDL-EKVKNV----YQE-------LGIEAIVTFI---DE-NMAAAYAAADLVISRA---G-ASTVAELAAA----- 269 (348)
T ss_pred --CcchH-HHHHHH----Hhh-------CCceEEecCc---cc-CHHHHHHhCCEEEECC---C-hhHHHHHHHc-----
Confidence 12221 333333 322 2222344444 22 7899999999999865 4 6899999999
Q ss_pred ccccccCCCCCCCCCceEEeccccccc-------ccC---CCCceeCCCC--HHHHHHHHHHHhCCCHHHHHHHHHHhhc
Q 003682 400 KLDMTLGLDPSTAKSSMLVVSEFVGCS-------PSL---SGAIRVNPWN--IDAVAEAMDSALGVSDAEKQMRHEKHYR 467 (803)
Q Consensus 400 ~~~~~~~~~~~~~~~g~vV~S~~~G~~-------~~l---~~~~lvnP~d--~~~~a~ai~~aL~~~~~er~~r~~~~~~ 467 (803)
|.|+|++...|.. +.+ ..|++++|.| +++++++|.+++. +++.++.+.+..++
T Consensus 270 --------------g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 270 --------------GVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL-DPANLEAMAEAARK 334 (348)
T ss_pred --------------CCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc-CHHHHHHHHHHHHh
Confidence 5678888765532 234 3488998876 9999999999996 45556666777777
Q ss_pred ccccCCHHHHHH
Q 003682 468 YVSTHDVAYWAR 479 (803)
Q Consensus 468 ~v~~~~~~~W~~ 479 (803)
++..+...++++
T Consensus 335 ~~~~~~~~~i~~ 346 (348)
T TIGR01133 335 LAKPDAAKRIAE 346 (348)
T ss_pred cCCccHHHHHHh
Confidence 777776666554
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=7.7e-09 Score=116.02 Aligned_cols=268 Identities=8% Similarity=0.076 Sum_probs=152.9
Q ss_pred HHHHHHhhcCCCCCeEEEeCccccchHHHHH-hhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhh
Q 003682 128 FADKVMEVISPDDDFVWVHDYHLMVLPTFLR-KRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDY 206 (803)
Q Consensus 128 fa~~i~~~~~~~~d~iwihDyhl~llp~~lr-~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~ 206 (803)
-..++++..+| |+|.++ |...+-..++ +...++|+. +.++-|-....| +. -.+|.+-..+...
T Consensus 95 ~l~~~l~~~kP--DvVi~~--~p~~~~~~l~~~~~~~iP~~-~v~td~~~~~~w---------~~--~~~d~~~v~s~~~ 158 (391)
T PRK13608 95 KLINLLIKEKP--DLILLT--FPTPVMSVLTEQFNINIPVA-TVMTDYRLHKNW---------IT--PYSTRYYVATKET 158 (391)
T ss_pred HHHHHHHHhCc--CEEEEC--CcHHHHHHHHHhcCCCCCEE-EEeCCCCccccc---------cc--CCCCEEEECCHHH
Confidence 34455566788 898886 3332333333 344467774 345554211111 10 1478776666554
Q ss_pred HHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh---CCC-EEEEeec
Q 003682 207 ARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQ-IVMLGVD 282 (803)
Q Consensus 207 ~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~---~~~-~iil~V~ 282 (803)
.+.+.. .|+. ..++.+.++.|+. .|.... . ...+++.+ +++ .+++++|
T Consensus 159 ~~~l~~-----~gi~---------------~~ki~v~GiPv~~-~f~~~~---~----~~~~~~~~~l~~~~~~ilv~~G 210 (391)
T PRK13608 159 KQDFID-----VGID---------------PSTVKVTGIPIDN-KFETPI---D----QKQWLIDNNLDPDKQTILMSAG 210 (391)
T ss_pred HHHHHH-----cCCC---------------HHHEEEECeecCh-Hhcccc---c----HHHHHHHcCCCCCCCEEEEECC
Confidence 443332 1221 1133344555553 343111 1 11233333 234 4667899
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCH
Q 003682 283 DMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQF 362 (803)
Q Consensus 283 Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~ 362 (803)
|+...||+..+++++ ++..|+++ +++++. ..+ ++.+++.+. .+. . ..+ .+.|.+
T Consensus 211 ~lg~~k~~~~li~~~---~~~~~~~~----~vvv~G----~~~---~l~~~l~~~---~~~----~--~~v-~~~G~~-- 264 (391)
T PRK13608 211 AFGVSKGFDTMITDI---LAKSANAQ----VVMICG----KSK---ELKRSLTAK---FKS----N--ENV-LILGYT-- 264 (391)
T ss_pred CcccchhHHHHHHHH---HhcCCCce----EEEEcC----CCH---HHHHHHHHH---hcc----C--CCe-EEEecc--
Confidence 999999999999885 34445443 655542 222 122333221 111 1 123 455554
Q ss_pred HHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC------CCCceeC
Q 003682 363 YERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL------SGAIRVN 436 (803)
Q Consensus 363 ~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l------~~~~lvn 436 (803)
+++..+|+.||+++.. +.|+++.|||+| |.|+|++...+..+.. ..|.-+-
T Consensus 265 ~~~~~~~~~aDl~I~k----~gg~tl~EA~a~-------------------G~PvI~~~~~pgqe~~N~~~~~~~G~g~~ 321 (391)
T PRK13608 265 KHMNEWMASSQLMITK----PGGITISEGLAR-------------------CIPMIFLNPAPGQELENALYFEEKGFGKI 321 (391)
T ss_pred chHHHHHHhhhEEEeC----CchHHHHHHHHh-------------------CCCEEECCCCCCcchhHHHHHHhCCcEEE
Confidence 5799999999999863 458899999999 5678887543322221 2233333
Q ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHH
Q 003682 437 PWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERAC 489 (803)
Q Consensus 437 P~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 489 (803)
+.|.++++++|.++++. ++.+..+.+..++....++....++.+++.+....
T Consensus 322 ~~~~~~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~ 373 (391)
T PRK13608 322 ADTPEEAIKIVASLTNG-NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSS 373 (391)
T ss_pred eCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhh
Confidence 66999999999999974 45555666677777777888888888877766543
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.10 E-value=6e-09 Score=115.58 Aligned_cols=252 Identities=14% Similarity=0.073 Sum_probs=143.1
Q ss_pred HHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEec--CC--CChhhhhcCCCcHHHHHHHhcCCEE
Q 003682 124 VNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHS--PF--PSSEIYRTLPIRDELLRALLNADLI 199 (803)
Q Consensus 124 vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~--pf--P~~~~~~~lp~~~~il~~ll~~dli 199 (803)
....+.+.+.+. +| |+|++|++....++..+..+..++|+....|- +| +.++. .....+.. .+|.+
T Consensus 76 ~~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~~~~~~~-----~~r~~~~~--~ad~~ 145 (363)
T cd03786 76 LLIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFDRGMPDE-----ENRHAIDK--LSDLH 145 (363)
T ss_pred HHHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCCCCCCch-----HHHHHHHH--Hhhhc
Confidence 344455555444 77 99999988766676666555557888765541 11 11110 00111111 24555
Q ss_pred eccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccC-ChhHHHHHhCCchHHHHHHHHHHHh---CCC
Q 003682 200 GFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGI-HIGQLQSVLNLPETEAKVAELQDQF---KGQ 275 (803)
Q Consensus 200 gf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gi-d~~~f~~~~~~~~~~~~~~~l~~~~---~~~ 275 (803)
..-+....+++.. .| ....++.++++++ |...+....... ...++.+ .++
T Consensus 146 ~~~s~~~~~~l~~-----~G---------------~~~~kI~vign~v~d~~~~~~~~~~~------~~~~~~~~~~~~~ 199 (363)
T cd03786 146 FAPTEEARRNLLQ-----EG---------------EPPERIFVVGNTMIDALLRLLELAKK------ELILELLGLLPKK 199 (363)
T ss_pred cCCCHHHHHHHHH-----cC---------------CCcccEEEECchHHHHHHHHHHhhcc------chhhhhcccCCCC
Confidence 4444443333332 12 1223566677764 544433211100 1111222 345
Q ss_pred EEEEeecCccc---ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003682 276 IVMLGVDDMDI---FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 352 (803)
Q Consensus 276 ~iil~V~Rld~---~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~ 352 (803)
.+++.++|+.. .||+..+++|++.+.++ ++.++..+. ++...++++. +.+.+.. .+
T Consensus 200 ~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~------~~~vi~~~~-----~~~~~~l~~~----~~~~~~~------~~ 258 (363)
T cd03786 200 YILVTLHRVENVDDGEQLEEILEALAELAEE------DVPVVFPNH-----PRTRPRIREA----GLEFLGH------HP 258 (363)
T ss_pred EEEEEeCCccccCChHHHHHHHHHHHHHHhc------CCEEEEECC-----CChHHHHHHH----HHhhccC------CC
Confidence 67788999875 79999999999887442 233554432 2222334333 3332210 12
Q ss_pred EEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccc-cCCC
Q 003682 353 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSP-SLSG 431 (803)
Q Consensus 353 v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~-~l~~ 431 (803)
.+.+.+....+++..+|+.||++|.+|- | +..|||+| |.|+|++...+... .+.+
T Consensus 259 ~v~~~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~-------------------g~PvI~~~~~~~~~~~~~~ 314 (363)
T cd03786 259 NVLLISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFL-------------------GVPVLNLRDRTERPETVES 314 (363)
T ss_pred CEEEECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhc-------------------CCCEEeeCCCCccchhhhe
Confidence 3345556678899999999999999984 4 46899998 56688886555443 4455
Q ss_pred CceeCC-CCHHHHHHHHHHHhCCCHH
Q 003682 432 AIRVNP-WNIDAVAEAMDSALGVSDA 456 (803)
Q Consensus 432 ~~lvnP-~d~~~~a~ai~~aL~~~~~ 456 (803)
|..+.+ .|+++++++|.++++.+..
T Consensus 315 g~~~~~~~~~~~i~~~i~~ll~~~~~ 340 (363)
T cd03786 315 GTNVLVGTDPEAILAAIEKLLSDEFA 340 (363)
T ss_pred eeEEecCCCHHHHHHHHHHHhcCchh
Confidence 555444 3799999999999986543
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.3e-10 Score=109.52 Aligned_cols=74 Identities=24% Similarity=0.220 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeCCH--hH-HH
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDT--AE-IL 774 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~~~--~e-v~ 774 (803)
+|..+++.+++++ |+++++++++||+.||++|++.+|.++++.++.+ ..+..|+|++.++ ++ +.
T Consensus 76 ~k~~~~~~~~~~~---~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~----------~~~~~a~~i~~~~~~~g~~~ 142 (154)
T TIGR01670 76 NKLIAFSDILEKL---ALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHP----------LLIPRADYVTRIAGGRGAVR 142 (154)
T ss_pred chHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCH----------HHHHhCCEEecCCCCCcHHH
Confidence 3899999999999 9999999999999999999999998644333211 1245688888654 33 88
Q ss_pred HHHHHHHHhh
Q 003682 775 RMLLGLAEAS 784 (803)
Q Consensus 775 ~~L~~l~~~~ 784 (803)
++++++.+..
T Consensus 143 ~~~~~~~~~~ 152 (154)
T TIGR01670 143 EVCELLLLAQ 152 (154)
T ss_pred HHHHHHHHhh
Confidence 9998887654
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.3e-10 Score=112.00 Aligned_cols=109 Identities=23% Similarity=0.281 Sum_probs=81.6
Q ss_pred cCCeEEEEecCCcCCCCC----CCCCCCCHHHH---HHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEE
Q 003682 530 TKNRAILLDYDGTIMVPG----SISTSPNAEAV---AILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYF 602 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~----~~~~~is~~~~---~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~ 602 (803)
..+|+|+||+||||++.. .....+...+. .+++.| +++|+.++|+|||+...+..+++.+ ++..
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L-~~~Gi~v~I~T~~~~~~v~~~l~~l---gl~~----- 89 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCL-LTSGIEVAIITGRKSKLVEDRMTTL---GITH----- 89 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHH-HHCCCEEEEEeCCCcHHHHHHHHHc---CCce-----
Confidence 359999999999999831 11333444333 788888 7789999999999999888877543 1100
Q ss_pred EEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeE
Q 003682 603 VRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS 682 (803)
Q Consensus 603 i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~ 682 (803)
+ |. +
T Consensus 90 --------~---------------------f~----g------------------------------------------- 93 (183)
T PRK09484 90 --------L---------------------YQ----G------------------------------------------- 93 (183)
T ss_pred --------e---------------------ec----C-------------------------------------------
Confidence 0 00 0
Q ss_pred EEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 683 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 683 v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
.-+|..+++.+++++ |++++++++|||+.||++|++.+|.+
T Consensus 94 -------------~~~k~~~l~~~~~~~---gl~~~ev~~VGDs~~D~~~a~~aG~~ 134 (183)
T PRK09484 94 -------------QSNKLIAFSDLLEKL---AIAPEQVAYIGDDLIDWPVMEKVGLS 134 (183)
T ss_pred -------------CCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 012568899999999 99999999999999999999999974
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=98.97 E-value=7e-10 Score=104.52 Aligned_cols=128 Identities=21% Similarity=0.246 Sum_probs=88.7
Q ss_pred CEEEEeecCcccccCHHHHHH-HHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003682 275 QIVMLGVDDMDIFKGISLKLL-AMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 353 (803)
Q Consensus 275 ~~iil~V~Rld~~Kgi~~~l~-A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v 353 (803)
..+|++.|++.+.||+..+++ |++++.+++|+++ |.++|..+ + + +.++ .. +.
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~~~-----~--~----l~~~-~~-----------~~ 54 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGNGP-----D--E----LKRL-RR-----------PN 54 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECESS--------H----HCCH-HH-----------CT
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeCCH-----H--H----HHHh-cC-----------CC
Confidence 467999999999999999999 9999999999654 88888532 2 1 2221 01 12
Q ss_pred EEecCCCCHHHHHHHHHhcccceeccc-ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC--
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-- 430 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~Adv~v~~S~-~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~-- 430 (803)
+.+.+.+ +++.++|+.||+++.|+. .++++..++|||++ |.|+|+|.. |..+.+.
T Consensus 55 v~~~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~-------------------G~pvi~~~~-~~~~~~~~~ 112 (135)
T PF13692_consen 55 VRFHGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAA-------------------GKPVIASDN-GAEGIVEED 112 (135)
T ss_dssp EEEE-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCT-------------------T--EEEEHH-HCHCHS---
T ss_pred EEEcCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHh-------------------CCCEEECCc-chhhheeec
Confidence 3445566 689999999999999984 78999999999998 667999988 6666552
Q ss_pred -CCceeCCCCHHHHHHHHHHHhC
Q 003682 431 -GAIRVNPWNIDAVAEAMDSALG 452 (803)
Q Consensus 431 -~~~lvnP~d~~~~a~ai~~aL~ 452 (803)
.++.+ +.|+++++++|.+++.
T Consensus 113 ~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 113 GCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp SEEEE--TT-HHHHHHHHHHHHH
T ss_pred CCeEEE-CCCHHHHHHHHHHHhc
Confidence 36666 8899999999999875
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.7e-08 Score=110.08 Aligned_cols=134 Identities=18% Similarity=0.195 Sum_probs=88.3
Q ss_pred CCEE-EEee-cCcccccC-HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003682 274 GQIV-MLGV-DDMDIFKG-ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 350 (803)
Q Consensus 274 ~~~i-il~V-~Rld~~Kg-i~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~ 350 (803)
++++ ++.. +|....|+ +..+++|++.+.+++|+++ +++++. +++..++++ +++.+. + +.
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~~~~~~----~~~~~~----~--~~ 246 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKRREQIE----EALAEY----A--GL 246 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----ChhhHHHHH----HHHhhc----C--CC
Confidence 4444 3333 47766544 6889999999988888654 666652 122222333 332221 0 11
Q ss_pred ccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEec----------
Q 003682 351 QPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS---------- 420 (803)
Q Consensus 351 ~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S---------- 420 (803)
.+.++. .++..+|+.||+++.+| |.+.+|+|+| |.|+|++
T Consensus 247 -~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~-------------------G~PvI~~~~~~~~~~~~ 296 (380)
T PRK00025 247 -EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALL-------------------KVPMVVGYKVSPLTFWI 296 (380)
T ss_pred -CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHh-------------------CCCEEEEEccCHHHHHH
Confidence 133333 37899999999999998 6788899999 5667776
Q ss_pred -------ccccccccCCC-----CceeCCCCHHHHHHHHHHHhCCCH
Q 003682 421 -------EFVGCSPSLSG-----AIRVNPWNIDAVAEAMDSALGVSD 455 (803)
Q Consensus 421 -------~~~G~~~~l~~-----~~lvnP~d~~~~a~ai~~aL~~~~ 455 (803)
.+.|.++.+.+ +++.++.|++++++++.++|+.++
T Consensus 297 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 343 (380)
T PRK00025 297 AKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGA 343 (380)
T ss_pred HHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHH
Confidence 44455555532 367788899999999999998543
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=98.90 E-value=5e-07 Score=105.30 Aligned_cols=182 Identities=11% Similarity=0.114 Sum_probs=121.6
Q ss_pred CCCEEEEeecCcccccCHHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003682 273 KGQIVMLGVDDMDIFKGISLKLLAMEQLLS--QNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 350 (803)
Q Consensus 273 ~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~--~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~ 350 (803)
++..+|..|.|+...||...++.+++++++ ++|+. .+.+|..|.+...+.. -.++.+.+.+++.+ -.+..
T Consensus 387 pd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~~-gk~~i~~i~~la~~--~~~~~--- 458 (601)
T TIGR02094 387 PDVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADGE-GKEIIQRIVEFSKR--PEFRG--- 458 (601)
T ss_pred CCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccch-HHHHHHHHHHHHhc--ccCCC---
Confidence 356799999999999999999999999986 55552 4677777755422211 12344445444432 01211
Q ss_pred ccEEEecCCCCHHHHHHHHHhccccee-ccc-ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccccccc
Q 003682 351 QPVVLIDTPLQFYERIAYYVIAECCLV-TAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPS 428 (803)
Q Consensus 351 ~~v~~~~~~~~~~~l~aly~~Adv~v~-~S~-~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~ 428 (803)
.|+++. ..+..--..++..||+++. ||. .|.-|+.-+=||.- |.+..|-.-|...+
T Consensus 459 -kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n--------------------GgL~~sv~DG~~~E 516 (601)
T TIGR02094 459 -RIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN--------------------GVLNLSILDGWWGE 516 (601)
T ss_pred -CEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc--------------------CCceeecccCcccc
Confidence 355555 4555555589999999999 777 89999988777773 45666666665554
Q ss_pred C---CCCceeCC------------CCHHHHHHHHHHHh-C----C-----CHHHHHHHHHHhhcccccCCHHHHHHHHHH
Q 003682 429 L---SGAIRVNP------------WNIDAVAEAMDSAL-G----V-----SDAEKQMRHEKHYRYVSTHDVAYWARSFLQ 483 (803)
Q Consensus 429 l---~~~~lvnP------------~d~~~~a~ai~~aL-~----~-----~~~er~~r~~~~~~~v~~~~~~~W~~~~l~ 483 (803)
. .+|+.+.+ .|.+++-++|.+++ . . |..-...+.+.+......+++.+-++++.+
T Consensus 517 ~~~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~ 596 (601)
T TIGR02094 517 GYDGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVD 596 (601)
T ss_pred cCCCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHH
Confidence 4 34888885 89999999998877 2 1 112233334444544556888888888776
Q ss_pred H
Q 003682 484 D 484 (803)
Q Consensus 484 ~ 484 (803)
.
T Consensus 597 ~ 597 (601)
T TIGR02094 597 K 597 (601)
T ss_pred H
Confidence 4
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.7e-09 Score=101.82 Aligned_cols=142 Identities=18% Similarity=0.114 Sum_probs=100.3
Q ss_pred CCeEEEEecCCcCCCCC---CC----CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEE
Q 003682 531 KNRAILLDYDGTIMVPG---SI----STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFV 603 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~---~~----~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i 603 (803)
.+|+++||+||||++.+ .. ....+.+--.+|+.| ++.|+.+.|+|+++...+...+..+ ++.
T Consensus 6 ~i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L-~~~Gi~laIiT~k~~~~~~~~l~~l---gi~------- 74 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVL-QLCGIDVAIITSKKSGAVRHRAEEL---KIK------- 74 (169)
T ss_pred cCeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHH-HHCCCEEEEEECCCcHHHHHHHHHC---CCc-------
Confidence 38999999999999832 11 123456677888888 7789999999999888887777432 110
Q ss_pred EeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEE
Q 003682 604 RPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSV 683 (803)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v 683 (803)
.|.. .
T Consensus 75 ------~~f~------------------------------------------~--------------------------- 79 (169)
T TIGR02726 75 ------RFHE------------------------------------------G--------------------------- 79 (169)
T ss_pred ------EEEe------------------------------------------c---------------------------
Confidence 0000 0
Q ss_pred EECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccc
Q 003682 684 KSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKA 763 (803)
Q Consensus 684 ~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A 763 (803)
+. .|...++.+++++ +++++++++|||+.||++|++.+|.+++|.|+.+. .+..|
T Consensus 80 --------~k----pkp~~~~~~~~~l---~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~----------lk~~A 134 (169)
T TIGR02726 80 --------IK----KKTEPYAQMLEEM---NISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVAD----------VKEAA 134 (169)
T ss_pred --------CC----CCHHHHHHHHHHc---CcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHH----------HHHhC
Confidence 01 3677899999999 99999999999999999999999987666554321 24668
Q ss_pred eeEeC--CHh-HHHHHHHHHHHh
Q 003682 764 KYYLD--DTA-EILRMLLGLAEA 783 (803)
Q Consensus 764 ~~~v~--~~~-ev~~~L~~l~~~ 783 (803)
+|++. +.+ .+.++++.+.+.
T Consensus 135 ~~I~~~~~~~g~v~e~~e~il~~ 157 (169)
T TIGR02726 135 AYVTTARGGHGAVREVAELILKA 157 (169)
T ss_pred CEEcCCCCCCCHHHHHHHHHHHh
Confidence 88764 233 356666666553
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.9e-08 Score=93.96 Aligned_cols=200 Identities=19% Similarity=0.222 Sum_probs=132.0
Q ss_pred HHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc-C-C-CCcEEecCcEE
Q 003682 526 AYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS-C-E-GLGIAAEHGYF 602 (803)
Q Consensus 526 ~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~-l-~-~l~lia~nGa~ 602 (803)
+++++..-|+.||.||||+. ....++++..+.|++| + +.+.+.++-|-..+.+.+.++. + . -....++||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~l-r-~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKL-R-KKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHH-h-hheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 45667778999999999999 7889999999999998 4 3689999999999888777743 1 2 23445899988
Q ss_pred EEeCCceeEEe-ecCC-CCccHHHHHHHHHHHHhh----cCCCceEeeccceEEEee--ccCCC----ccc-----hhhH
Q 003682 603 VRPNYGVDWET-CVSV-PDFSWKQIAEPVMKLYTE----TTDGSTIETKESALVWNF--QYADP----DFG-----SCQA 665 (803)
Q Consensus 603 i~~~~~~~~~~-~~~~-~~~~~~~~~~~i~~~y~~----~~~g~~ie~k~~~~~~~~--~~~d~----~~~-----~~~~ 665 (803)
-+..|...-.. +... .+..+++.+.-.+.|..+ ...|.++|.+...+...- +++.. +|. ...-
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR 159 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIR 159 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhH
Confidence 77665432111 1000 011122222222333332 124788888766554431 22221 111 1123
Q ss_pred HHHHHHHHHHhcCCCeEE-EECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeC----ChhhHHHHHHc
Q 003682 666 KELLDHLESVLANEPVSV-KSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVI 736 (803)
Q Consensus 666 ~el~~~l~~~l~~~~~~v-~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD----~~NDi~Mf~~a 736 (803)
+.+.+.|++.+.+++... +.|.-.++|.|.|++|-.-++++-+. ..+.+..||| +.||.+.|..-
T Consensus 160 ~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d------gf~~IhFFGDkT~~GGNDyEIf~dp 229 (252)
T KOG3189|consen 160 EKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD------GFDTIHFFGDKTMPGGNDYEIFADP 229 (252)
T ss_pred HHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc------CCceEEEeccccCCCCCcceeeeCC
Confidence 456788888888887655 45677899999999998888887553 3688999999 68999887643
|
|
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.2e-08 Score=96.58 Aligned_cols=192 Identities=18% Similarity=0.270 Sum_probs=125.3
Q ss_pred HHHHHHHhcCCCCeEEEEcCCChhhHHHHhh-c-C--CCCcEEecCcEEEEeCCceeEEeecCCC--CccHHHHHHHHHH
Q 003682 558 VAILDNLCRDPKNVVFLVSGKDRDTLAEWFS-S-C--EGLGIAAEHGYFVRPNYGVDWETCVSVP--DFSWKQIAEPVMK 631 (803)
Q Consensus 558 ~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~-~-l--~~l~lia~nGa~i~~~~~~~~~~~~~~~--~~~~~~~~~~i~~ 631 (803)
.+.|++| .+ .+.|.|+||-....+++.+. . + ....+.++||...+..+...|...+... +...++.+..++.
T Consensus 2 ~~~L~~L-~~-~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l~ 79 (220)
T PF03332_consen 2 AELLQKL-RK-KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCLR 79 (220)
T ss_dssp HHHHHHH-HT-TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-Hh-cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHHH
Confidence 5678887 43 69999999999999888773 2 1 2235789999999999888886543110 1112222222333
Q ss_pred HHhh----cCCCceEeeccceEEEee--ccCCC----ccch-----hhHHHHHHHHHHHhcCCCeEE-EECCeEEEEEeC
Q 003682 632 LYTE----TTDGSTIETKESALVWNF--QYADP----DFGS-----CQAKELLDHLESVLANEPVSV-KSGPNIVEVKPQ 695 (803)
Q Consensus 632 ~y~~----~~~g~~ie~k~~~~~~~~--~~~d~----~~~~-----~~~~el~~~l~~~l~~~~~~v-~~g~~~vEI~p~ 695 (803)
+..+ ...|.++|.+...+.+.- +++.. .|.. ..-+.+++.|.+.|++..+.+ ..|...++|.|+
T Consensus 80 ~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp~ 159 (220)
T PF03332_consen 80 YISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFPK 159 (220)
T ss_dssp HHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEET
T ss_pred HHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEccccC
Confidence 3222 134889999988887753 22211 1110 112356778888888877654 567899999999
Q ss_pred CCCHHHHHHHHHHHhhhCCCCcccEEEEeC----ChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeCCHh
Q 003682 696 GVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTA 771 (803)
Q Consensus 696 gv~Kg~al~~ll~~l~~~gi~~d~vla~GD----~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~~~~ 771 (803)
|++|..+|++|.+. ..+++++||| +.||.++|...+. .+.+ |.+++
T Consensus 160 GwDKty~Lr~l~~~------~~~~I~FfGDkt~pGGNDyei~~~~rt-------------~g~~-----------V~~p~ 209 (220)
T PF03332_consen 160 GWDKTYCLRHLEDE------GFDEIHFFGDKTFPGGNDYEIFEDPRT-------------IGHT-----------VTSPE 209 (220)
T ss_dssp T-SGGGGGGGTTTT------T-SEEEEEESS-STTSTTHHHHHSTTS-------------EEEE------------SSHH
T ss_pred CccHHHHHHHHHhc------ccceEEEEehhccCCCCCceeeecCCc-------------cEEE-----------eCCHH
Confidence 99999999998653 2799999999 6999999987654 3332 67899
Q ss_pred HHHHHHHHHH
Q 003682 772 EILRMLLGLA 781 (803)
Q Consensus 772 ev~~~L~~l~ 781 (803)
+..+.|++|.
T Consensus 210 DT~~~l~~l~ 219 (220)
T PF03332_consen 210 DTIKQLKELF 219 (220)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998875
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.2e-08 Score=104.10 Aligned_cols=65 Identities=17% Similarity=0.139 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC---CccceeEeC--CHh
Q 003682 697 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLD--DTA 771 (803)
Q Consensus 697 v~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~---~s~A~~~v~--~~~ 771 (803)
..|+.+++.+++++ |++++++++|||+.||++|++.+|.+ |++..+ +..|++.++ +.+
T Consensus 247 k~K~~~L~~la~~l---gi~~~qtIaVGDg~NDl~m~~~AGlg--------------iA~nAkp~Vk~~Ad~~i~~~~l~ 309 (322)
T PRK11133 247 QYKADTLTRLAQEY---EIPLAQTVAIGDGANDLPMIKAAGLG--------------IAYHAKPKVNEQAQVTIRHADLM 309 (322)
T ss_pred ccHHHHHHHHHHHc---CCChhhEEEEECCHHHHHHHHHCCCe--------------EEeCCCHHHHhhCCEEecCcCHH
Confidence 46999999999999 99999999999999999999999975 344222 367888886 556
Q ss_pred HHHHHHH
Q 003682 772 EILRMLL 778 (803)
Q Consensus 772 ev~~~L~ 778 (803)
+|+-+|.
T Consensus 310 ~~l~~~~ 316 (322)
T PRK11133 310 GVLCILS 316 (322)
T ss_pred HHHHHhc
Confidence 6766654
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.7e-07 Score=107.73 Aligned_cols=147 Identities=10% Similarity=0.033 Sum_probs=112.9
Q ss_pred CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCC---
Q 003682 273 KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPG--- 349 (803)
Q Consensus 273 ~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~--- 349 (803)
.++.|.+++||| +.|-+..+|+|+.++++++|+.. |.+.|..+ . .++.+.+++++.++|..++...
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~~---~---~~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYNN---D---NDITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEecC---c---hhHHHHHHHHHHHHHhhhchhhhcc
Confidence 456677777799 99999999999999999999876 77666432 1 2235556666666665532210
Q ss_pred -------------------cccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCC
Q 003682 350 -------------------YQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPS 410 (803)
Q Consensus 350 -------------------~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~ 410 (803)
-...+.|.+..+..++...|..|.++|.+|..|||+ +.+|||+.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~---------------- 450 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISA---------------- 450 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHc----------------
Confidence 003567787777779999999999999999999999 99999997
Q ss_pred CCCCceEEecccccccccC---CCCceeCCCCHHHHHHHHHHHhCCCH
Q 003682 411 TAKSSMLVVSEFVGCSPSL---SGAIRVNPWNIDAVAEAMDSALGVSD 455 (803)
Q Consensus 411 ~~~~g~vV~S~~~G~~~~l---~~~~lvnP~d~~~~a~ai~~aL~~~~ 455 (803)
|-|+| .-|.++.+ .+|++| .|..++++||...|..+.
T Consensus 451 ---GiPqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 451 ---GIPQI---NKVETDYVEHNKNGYII--DDISELLKALDYYLDNLK 490 (519)
T ss_pred ---CCCee---ecCCceeeEcCCCcEEe--CCHHHHHHHHHHHHhCHH
Confidence 44555 66777777 359999 689999999999998553
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.79 E-value=2e-08 Score=93.98 Aligned_cols=55 Identities=22% Similarity=0.308 Sum_probs=45.8
Q ss_pred EEEEecCCcCCCCCC-----CCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 534 AILLDYDGTIMVPGS-----ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 534 li~~DlDGTLl~~~~-----~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
+++||+||||++..+ ....+.+.+.+.|++| ++.|+.++++|||....++.+++.
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~ivS~~~~~~~~~~~~~ 60 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKEL-KEKGIKLALATNKSRREVLELLEE 60 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHH-HHCCCeEEEEeCchHHHHHHHHHH
Confidence 489999999998421 1127789999999998 777999999999999999988854
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.6e-07 Score=103.00 Aligned_cols=236 Identities=13% Similarity=0.042 Sum_probs=134.0
Q ss_pred HHhhcCCCCCeEEEeCccccc--hHH-HHHh-hCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccCHhhH
Q 003682 132 VMEVISPDDDFVWVHDYHLMV--LPT-FLRK-RFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYA 207 (803)
Q Consensus 132 i~~~~~~~~d~iwihDyhl~l--lp~-~lr~-~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~~~~~ 207 (803)
++..++| +|+|.+|..-+.. ++. ++++ +..++|+.+++|.-||..-... -.........+-.+|.|..++....
T Consensus 58 ~~~~~~~-~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~-~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKP-GDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSN-YYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCC-CCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhcccc-chhhHHHHHHHHhCCEEEECCHHHH
Confidence 4555777 5999999754332 222 2222 1126999999998776421110 0012223344556899988887655
Q ss_pred HHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCEEEEeecCcccc
Q 003682 208 RHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIF 287 (803)
Q Consensus 208 ~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~iil~V~Rld~~ 287 (803)
+.+.+ .|+. ..++.+.|+..+..... + +....+++.|+++||+...
T Consensus 136 ~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~-----~---------~~~~~~~~~i~yaG~l~k~ 181 (333)
T PRK09814 136 DRLVE-----EGLT---------------TDKIIVQGIFDYLNDIE-----L---------VKTPSFQKKINFAGNLEKS 181 (333)
T ss_pred HHHHH-----cCCC---------------cCceEeccccccccccc-----c---------cccccCCceEEEecChhhc
Confidence 54432 1221 01222233322221100 0 0111345689999999943
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHH
Q 003682 288 KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIA 367 (803)
Q Consensus 288 Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~a 367 (803)
.++. +..|+. .|+++|.+. +.. . ..+.+.+.|.++.+++..
T Consensus 182 ~~l~----------~~~~~~----~l~i~G~g~-----~~~-------~-------------~~~~V~f~G~~~~eel~~ 222 (333)
T PRK09814 182 PFLK----------NWSQGI----KLTVFGPNP-----EDL-------E-------------NSANISYKGWFDPEELPN 222 (333)
T ss_pred hHHH----------hcCCCC----eEEEECCCc-----ccc-------c-------------cCCCeEEecCCCHHHHHH
Confidence 3211 124443 477777432 111 0 012356777999999999
Q ss_pred HHHhcccceeccc-----------ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC---CCc
Q 003682 368 YYVIAECCLVTAV-----------RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GAI 433 (803)
Q Consensus 368 ly~~Adv~v~~S~-----------~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~~ 433 (803)
+|+. |+.+++.- .-.++--..||||| |.|||++..++.++.+. .|+
T Consensus 223 ~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~-------------------G~PVI~~~~~~~~~~V~~~~~G~ 282 (333)
T PRK09814 223 ELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAA-------------------GLPVIVWSKAAIADFIVENGLGF 282 (333)
T ss_pred HHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHC-------------------CCCEEECCCccHHHHHHhCCceE
Confidence 9988 66555331 11233336778999 67899999999998882 388
Q ss_pred eeCCCCHHHHHHHHHHHhCCCHHHHHHHHHHhhc
Q 003682 434 RVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYR 467 (803)
Q Consensus 434 lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~ 467 (803)
+++ +.++++++|.++ +++++..+.++.++
T Consensus 283 ~v~--~~~el~~~l~~~---~~~~~~~m~~n~~~ 311 (333)
T PRK09814 283 VVD--SLEELPEIIDNI---TEEEYQEMVENVKK 311 (333)
T ss_pred EeC--CHHHHHHHHHhc---CHHHHHHHHHHHHH
Confidence 887 678899998873 45555544444443
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.68 E-value=7.9e-08 Score=98.83 Aligned_cols=79 Identities=24% Similarity=0.298 Sum_probs=62.4
Q ss_pred EEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC---
Q 003682 683 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--- 759 (803)
Q Consensus 683 v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~--- 759 (803)
+..+.....-+| +...+..+++.+ |.++++++++||+.+|+.|.+.+|. .+++|++|..
T Consensus 135 i~g~~~~~~~KP----~P~~l~~~~~~~---~~~~~~~l~VGDs~~Di~aA~~Ag~-----------~~v~v~~g~~~~~ 196 (220)
T COG0546 135 IVGGDDVPPPKP----DPEPLLLLLEKL---GLDPEEALMVGDSLNDILAAKAAGV-----------PAVGVTWGYNSRE 196 (220)
T ss_pred EEcCCCCCCCCc----CHHHHHHHHHHh---CCChhheEEECCCHHHHHHHHHcCC-----------CEEEEECCCCCCc
Confidence 333444544455 677888999998 8888899999999999999999995 3478999852
Q ss_pred ---CccceeEeCCHhHHHHHHHH
Q 003682 760 ---PSKAKYYLDDTAEILRMLLG 779 (803)
Q Consensus 760 ---~s~A~~~v~~~~ev~~~L~~ 779 (803)
...|++++++..++...|..
T Consensus 197 ~l~~~~~d~vi~~~~el~~~l~~ 219 (220)
T COG0546 197 ELAQAGADVVIDSLAELLALLAE 219 (220)
T ss_pred chhhcCCCEEECCHHHHHHHHhc
Confidence 25689999999999887753
|
|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.3e-06 Score=103.82 Aligned_cols=183 Identities=11% Similarity=0.065 Sum_probs=121.6
Q ss_pred CEEEEeecCcccccCHHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003682 275 QIVMLGVDDMDIFKGISLKLLAMEQLLS--QNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 352 (803)
Q Consensus 275 ~~iil~V~Rld~~Kgi~~~l~A~~~ll~--~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~ 352 (803)
..+|.++.|+...|+...++..++++.+ .+|+ ..+.+|..|.....+.. -.++.+.+.++... -++.. .
T Consensus 478 ~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~~-gK~iIk~i~~~a~~--p~~~~----k 548 (778)
T cd04299 478 VLTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADEP-GKELIQEIVEFSRR--PEFRG----R 548 (778)
T ss_pred ccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccchH-HHHHHHHHHHHHhC--cCCCC----c
Confidence 3489999999999999999999999865 3444 24778877754422211 12344444444331 02211 3
Q ss_pred EEEecCCCCHHHHHHHHHhcccceeccc--ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC-
Q 003682 353 VVLIDTPLQFYERIAYYVIAECCLVTAV--RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL- 429 (803)
Q Consensus 353 v~~~~~~~~~~~l~aly~~Adv~v~~S~--~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l- 429 (803)
|+++. ..+-.--..++..|||++.||. .|.-|+.-+=||. .|.+-+|-.-|.-.+.
T Consensus 549 Vvfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~--------------------NG~LnlSvlDGww~E~~ 607 (778)
T cd04299 549 IVFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAAL--------------------NGGLNLSVLDGWWDEGY 607 (778)
T ss_pred EEEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHH--------------------cCCeeeecccCcccccc
Confidence 55555 4555555689999999999999 8988887766666 3668888888766655
Q ss_pred --CCCceeCC------------CCHHHHHHHHHHHhC----------CCHHHHHHHHHHhhcccccCCHHHHHHHHHHHH
Q 003682 430 --SGAIRVNP------------WNIDAVAEAMDSALG----------VSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 485 (803)
Q Consensus 430 --~~~~lvnP------------~d~~~~a~ai~~aL~----------~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 485 (803)
.+|+.+.+ .|.+++.+.|.+.+- .|..-.+.+.+.+....-.+++.+.++++++.+
T Consensus 608 ~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 608 DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred CCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 34888887 556666677755443 133333334444555556789999999998887
Q ss_pred HH
Q 003682 486 ER 487 (803)
Q Consensus 486 ~~ 487 (803)
..
T Consensus 688 Y~ 689 (778)
T cd04299 688 YL 689 (778)
T ss_pred HH
Confidence 64
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.2e-07 Score=94.42 Aligned_cols=65 Identities=15% Similarity=0.175 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCCh-hhHHHHHHcchhcCCCCCCCCcceEEEEeCC-C-------CccceeEeCC
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-K-------PSKAKYYLDD 769 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~-NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~-~-------~s~A~~~v~~ 769 (803)
+...++.+++++ +.+++++++|||+. +|+.+-+.+|. .++.|..|. . ...+.|++++
T Consensus 181 ~p~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~~G~-----------~~i~v~~G~~~~~~~~~~~~~pd~~~~s 246 (257)
T TIGR01458 181 SKTFFLEALRAT---GCEPEEAVMIGDDCRDDVGGAQDCGM-----------RGIQVRTGKYRPSDEEKINVPPDLTCDS 246 (257)
T ss_pred CHHHHHHHHHHh---CCChhhEEEECCCcHHHHHHHHHcCC-----------eEEEECCCCCChHHhcccCCCCCEEECC
Confidence 455778888888 99999999999995 99999999997 335666663 1 1347788999
Q ss_pred HhHHHHHH
Q 003682 770 TAEILRML 777 (803)
Q Consensus 770 ~~ev~~~L 777 (803)
..++.++|
T Consensus 247 l~el~~~l 254 (257)
T TIGR01458 247 LPHAVDLI 254 (257)
T ss_pred HHHHHHHH
Confidence 99988765
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.1e-06 Score=91.73 Aligned_cols=59 Identities=17% Similarity=0.214 Sum_probs=49.9
Q ss_pred CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcE
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 595 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~l 595 (803)
+|+|+||+||||+. .+ .+.+.+.++|++| ++.|.+++++|+|+......+...+..+|+
T Consensus 1 ~~~v~~DlDGtL~~---~~-~~~p~a~~~l~~L-~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 1 IKNVICDIDGVLMH---DN-VAVPGAAEFLHRI-LDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CcEEEEeCCCceEe---CC-eeCccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 57999999999998 44 6788999999999 889999999999999887777766544444
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=8.8e-08 Score=88.70 Aligned_cols=72 Identities=18% Similarity=0.220 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeC---CHhHHH
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLD---DTAEIL 774 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~---~~~ev~ 774 (803)
+|-.+.+.|++++ ++.++++.++||+.||+++|+.+|.++|..++.. ..+.+|.|++. ....|.
T Consensus 83 dK~~a~~~L~~~~---~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~----------~v~~~a~~Vt~~~GG~GAvR 149 (170)
T COG1778 83 DKLAAFEELLKKL---NLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHP----------LLKQRADYVTSKKGGEGAVR 149 (170)
T ss_pred hHHHHHHHHHHHh---CCCHHHhhhhcCccccHHHHHHcCCcccccccCH----------HHHHhhHhhhhccCcchHHH
Confidence 3777888899999 9999999999999999999999998755433221 12456777763 334455
Q ss_pred HHHHHHHH
Q 003682 775 RMLLGLAE 782 (803)
Q Consensus 775 ~~L~~l~~ 782 (803)
++.+-+..
T Consensus 150 Ev~dlil~ 157 (170)
T COG1778 150 EVCDLILQ 157 (170)
T ss_pred HHHHHHHH
Confidence 55554444
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=4.2e-08 Score=100.46 Aligned_cols=68 Identities=19% Similarity=0.225 Sum_probs=57.4
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------CccceeEeCCHh
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTA 771 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------~s~A~~~v~~~~ 771 (803)
-|...++++++++ +.+++++++|||+.+|+.+.+.+|. .+++|.+|.. ...|.|.+++..
T Consensus 139 p~p~~~~~~~~~~---~~~~~~~~~iGDs~~Di~aa~~aG~-----------~~i~v~~g~~~~~~l~~~~~~~~i~~~~ 204 (214)
T PRK13288 139 PDPEPVLKALELL---GAKPEEALMVGDNHHDILAGKNAGT-----------KTAGVAWTIKGREYLEQYKPDFMLDKMS 204 (214)
T ss_pred CCcHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC-----------eEEEEcCCCCCHHHHhhcCcCEEECCHH
Confidence 3788999999999 9999999999999999999999997 3467877742 135889999999
Q ss_pred HHHHHHHH
Q 003682 772 EILRMLLG 779 (803)
Q Consensus 772 ev~~~L~~ 779 (803)
++.+++..
T Consensus 205 ~l~~~i~~ 212 (214)
T PRK13288 205 DLLAIVGD 212 (214)
T ss_pred HHHHHHhh
Confidence 99888754
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=98.55 E-value=5.7e-07 Score=94.22 Aligned_cols=54 Identities=22% Similarity=0.335 Sum_probs=45.6
Q ss_pred CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcC---CChhhHHHHhhcC
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSG---KDRDTLAEWFSSC 590 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTG---R~~~~l~~~~~~l 590 (803)
+|.|+||+||||++ .+..++ .+.++|++| ++.|.+|+++|| |+...+.+.+..+
T Consensus 1 ~~~~~~D~DGtl~~---~~~~i~-~a~~~l~~l-~~~g~~~~~~Tnn~~r~~~~~~~~l~~~ 57 (249)
T TIGR01457 1 YKGYLIDLDGTMYK---GKERIP-EAETFVHEL-QKRDIPYLFVTNNSTRTPESVAEMLASF 57 (249)
T ss_pred CCEEEEeCCCceEc---CCeeCc-CHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHc
Confidence 37899999999998 555554 799999998 889999999995 8899888887654
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.6e-07 Score=92.13 Aligned_cols=44 Identities=18% Similarity=0.211 Sum_probs=39.7
Q ss_pred EeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 693 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 693 ~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
.-.+-+|..+++.+++.+ |+++++++++|||.||++||+.+|..
T Consensus 139 ~~~~~~K~~~l~~~~~~~---g~~~~~~~a~gDs~nDlpml~~ag~~ 182 (212)
T COG0560 139 ICDGEGKAKALRELAAEL---GIPLEETVAYGDSANDLPMLEAAGLP 182 (212)
T ss_pred ecCcchHHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHhCCCC
Confidence 334567999999999999 99999999999999999999999974
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.2e-08 Score=101.56 Aligned_cols=66 Identities=17% Similarity=0.145 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC--C-----ccceeEeCCHh
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--P-----SKAKYYLDDTA 771 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~--~-----s~A~~~v~~~~ 771 (803)
+...+.++++++ |++++++++|||+.+|+.+.+.+|. .+++|.+|.. . ..|.|.++++.
T Consensus 153 ~p~~~~~~~~~l---~~~p~~~l~IGDs~~Di~aA~~aG~-----------~~i~v~~g~~~~~~~~~~~~~~~~i~~~~ 218 (229)
T PRK13226 153 HPLPLLVAAERI---GVAPTDCVYVGDDERDILAARAAGM-----------PSVAALWGYRLHDDDPLAWQADVLVEQPQ 218 (229)
T ss_pred CHHHHHHHHHHh---CCChhhEEEeCCCHHHHHHHHHCCC-----------cEEEEeecCCCCCcChhhcCCCeeeCCHH
Confidence 567799999999 9999999999999999999999997 3477888742 1 24889999999
Q ss_pred HHHHHHH
Q 003682 772 EILRMLL 778 (803)
Q Consensus 772 ev~~~L~ 778 (803)
++.+.|.
T Consensus 219 el~~~~~ 225 (229)
T PRK13226 219 LLWNPAT 225 (229)
T ss_pred HHHHHhc
Confidence 9988775
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.7e-07 Score=90.58 Aligned_cols=52 Identities=12% Similarity=0.261 Sum_probs=45.5
Q ss_pred EEEEecCCcCCCCCCCC-----------CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHH---HHhhc
Q 003682 534 AILLDYDGTIMVPGSIS-----------TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA---EWFSS 589 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~-----------~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~---~~~~~ 589 (803)
+|++|+||||++ ++ ..+++.+.++++++ +++|+.|+++|||+..... +++..
T Consensus 1 iVisDIDGTL~~---sd~~~~~~~~~~~~~~~~~~~~a~~~l-~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 1 IVISDIDGTITK---SDVLGHVVPIIGKDWTHPGVAKLYRDI-QNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CEEEecCCCCcc---cccccccccccccCcCCHHHHHHHHHH-HHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 589999999998 44 57899999999998 8999999999999998874 66654
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.9e-07 Score=95.79 Aligned_cols=70 Identities=19% Similarity=0.292 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------CccceeEeCCHh
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTA 771 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------~s~A~~~v~~~~ 771 (803)
.|..++..+++++ +++++++++|||+.+|+.+.+.+|. .+++|..|.. ...|.|.+++..
T Consensus 196 ~k~~~~~~~l~~~---~~~p~~~l~IGDs~~Di~aA~~AG~-----------~~I~v~~g~~~~~~l~~~~ad~~i~~~~ 261 (273)
T PRK13225 196 SKRRALSQLVARE---GWQPAAVMYVGDETRDVEAARQVGL-----------IAVAVTWGFNDRQSLVAACPDWLLETPS 261 (273)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEECCCHHHHHHHHHCCC-----------eEEEEecCCCCHHHHHHCCCCEEECCHH
Confidence 4778899999999 9999999999999999999999997 3477778742 245899999999
Q ss_pred HHHHHHHHHH
Q 003682 772 EILRMLLGLA 781 (803)
Q Consensus 772 ev~~~L~~l~ 781 (803)
++..++.+|.
T Consensus 262 eL~~~~~~~~ 271 (273)
T PRK13225 262 DLLQAVTQLM 271 (273)
T ss_pred HHHHHHHHHh
Confidence 9999988775
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.3e-06 Score=96.55 Aligned_cols=103 Identities=9% Similarity=0.128 Sum_probs=67.0
Q ss_pred HHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC--------CCCcee
Q 003682 364 ERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL--------SGAIRV 435 (803)
Q Consensus 364 ~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l--------~~~~lv 435 (803)
++..+.+.+|+.|+||.||..|.+++|+.|. |.|-|.|+.+|....+ ..|+.|
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~-------------------gVPsITTnLsGFG~~~~~~~~~~~~~GV~V 522 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAF-------------------GVPSITTNLSGFGCWMQEHIEDPEEYGVYV 522 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHT-------------------T--EEEETTBHHHHHHHTTS-HHGGGTEEE
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhc-------------------CCceeeccchhHHHHHHHhhccCcCCcEEE
Confidence 6788899999999999999999999999998 6789999999977544 125543
Q ss_pred -CC--CC----HHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHHHHHHHHHHH
Q 003682 436 -NP--WN----IDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDL 485 (803)
Q Consensus 436 -nP--~d----~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 485 (803)
+= .+ ++++++.|.+...++..+|....++..+.-..-+|.+....+.+.-
T Consensus 523 vdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay 579 (633)
T PF05693_consen 523 VDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAY 579 (633)
T ss_dssp E-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 32 22 3567777777778888887766555554444456665555554443
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.4e-07 Score=97.29 Aligned_cols=70 Identities=20% Similarity=0.202 Sum_probs=57.0
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------CccceeEeC
Q 003682 695 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLD 768 (803)
Q Consensus 695 ~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------~s~A~~~v~ 768 (803)
.+-.+...++.+++++ |++++++++|||+.+|+.+.+.+|. .+++|.+|.. ...|.+.++
T Consensus 155 ~~Kp~p~~~~~~~~~~---g~~~~~~l~IGD~~~Di~aA~~aGi-----------~~i~v~~G~~~~~~l~~~~~~~vi~ 220 (272)
T PRK13223 155 QKKPDPAALLFVMKMA---GVPPSQSLFVGDSRSDVLAAKAAGV-----------QCVALSYGYNHGRPIAEESPALVID 220 (272)
T ss_pred CCCCCcHHHHHHHHHh---CCChhHEEEECCCHHHHHHHHHCCC-----------eEEEEecCCCCchhhhhcCCCEEEC
Confidence 3444777899999999 9999999999999999999999997 3467777731 246888999
Q ss_pred CHhHHHHHHH
Q 003682 769 DTAEILRMLL 778 (803)
Q Consensus 769 ~~~ev~~~L~ 778 (803)
+..++.+++.
T Consensus 221 ~l~el~~~~~ 230 (272)
T PRK13223 221 DLRALLPGCA 230 (272)
T ss_pred CHHHHHHHHh
Confidence 9999886655
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=98.45 E-value=3.8e-06 Score=89.67 Aligned_cols=59 Identities=20% Similarity=0.335 Sum_probs=44.3
Q ss_pred CeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcE
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 595 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~l 595 (803)
+++|+||+||||++ ... +.+.+.++|++| +++|.+++++|+|+......+...+..+++
T Consensus 2 ~~~~~~D~DGtl~~---~~~-~~~ga~e~l~~L-~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~ 60 (279)
T TIGR01452 2 AQGFIFDCDGVLWL---GER-VVPGAPELLDRL-ARAGKAALFVTNNSTKSRAEYALKFARLGF 60 (279)
T ss_pred ccEEEEeCCCceEc---CCe-eCcCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 68999999999998 444 445599999999 888999999999886655554433333333
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.5e-06 Score=87.63 Aligned_cols=62 Identities=24% Similarity=0.370 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC---CccceeEeC--CHhH
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLD--DTAE 772 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~---~s~A~~~v~--~~~e 772 (803)
.|+..++.+++++ +++++++++|||+.+|+++++.+|.. +.++.. +..|++.+. +..+
T Consensus 152 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Di~aa~~ag~~--------------i~~~~~~~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 152 YKGKTLLILLRKE---GISPENTVAVGDGANDLSMIKAAGLG--------------IAFNAKPKLQQKADICINKKDLTD 214 (219)
T ss_pred ccHHHHHHHHHHc---CCCHHHEEEEECCHHHHHHHHhCCCe--------------EEeCCCHHHHHhchhccCCCCHHH
Confidence 4899999999999 99999999999999999999999874 334432 256788876 4455
Q ss_pred HHHH
Q 003682 773 ILRM 776 (803)
Q Consensus 773 v~~~ 776 (803)
++.+
T Consensus 215 ~~~~ 218 (219)
T TIGR00338 215 ILPL 218 (219)
T ss_pred HHhh
Confidence 5443
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=98.43 E-value=5.4e-06 Score=89.88 Aligned_cols=60 Identities=22% Similarity=0.283 Sum_probs=48.0
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcE
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 595 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~l 595 (803)
.+++|+||+||||+. .+ .+.+.+.++|++| ++.|.+++++|+|+....+.++..+..+|+
T Consensus 27 ~~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~l-r~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 27 SVETFIFDCDGVIWK---GD-KLIEGVPETLDML-RSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred hCCEEEEeCcCCeEe---CC-ccCcCHHHHHHHH-HHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 479999999999998 44 4568889999998 889999999999997766666654434444
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=5.7e-07 Score=92.76 Aligned_cols=67 Identities=24% Similarity=0.270 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------CccceeEeCCHhH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTAE 772 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------~s~A~~~v~~~~e 772 (803)
|..+++.+++++ +++++++++|||+.+|+++.+.+|.. ++.|.+|.. ...+.|++++..+
T Consensus 151 ~~~~~~~~~~~~---~~~~~~~i~igD~~~Di~~a~~~g~~-----------~i~v~~g~~~~~~~~~~~~~~~i~~~~~ 216 (226)
T PRK13222 151 DPAPLLLACEKL---GLDPEEMLFVGDSRNDIQAARAAGCP-----------SVGVTYGYNYGEPIALSEPDVVIDHFAE 216 (226)
T ss_pred ChHHHHHHHHHc---CCChhheEEECCCHHHHHHHHHCCCc-----------EEEECcCCCCccchhhcCCCEEECCHHH
Confidence 678899999999 99999999999999999999999973 366766632 2357899999999
Q ss_pred HHHHHHH
Q 003682 773 ILRMLLG 779 (803)
Q Consensus 773 v~~~L~~ 779 (803)
+...|.+
T Consensus 217 l~~~l~~ 223 (226)
T PRK13222 217 LLPLLGL 223 (226)
T ss_pred HHHHHHH
Confidence 9887753
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.36 E-value=2e-05 Score=88.13 Aligned_cols=134 Identities=16% Similarity=0.095 Sum_probs=82.5
Q ss_pred CCEEEE--eecCccc-ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003682 274 GQIVML--GVDDMDI-FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 350 (803)
Q Consensus 274 ~~~iil--~V~Rld~-~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~ 350 (803)
++++|+ +.+|..+ .|+++.+++|++.+.+++|+++ +++++.+. ...+.+ +++.... +. +.
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~~~~----~~~~~~~----~~-~~ 252 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRRLQF----EQIKAEY----GP-DL 252 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhHHHH----HHHHHHh----CC-CC
Confidence 555553 4469988 7999999999999998888765 54443221 111122 2222221 11 11
Q ss_pred ccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecc---------
Q 003682 351 QPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE--------- 421 (803)
Q Consensus 351 ~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~--------- 421 (803)
.++.+.+ +...+|++||++|.+| |.+.+|+|+|+ .|+|++-
T Consensus 253 -~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G-------------------~P~Vv~yk~~pl~~~~ 302 (385)
T TIGR00215 253 -QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIK-------------------TPMVVGYRMKPLTFLI 302 (385)
T ss_pred -cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcC-------------------CCEEEEEcCCHHHHHH
Confidence 2444433 3567999999999999 66777999994 4455551
Q ss_pred --------cccccccCCC-C----ceeCCCCHHHHHHHHHHHhCCC
Q 003682 422 --------FVGCSPSLSG-A----IRVNPWNIDAVAEAMDSALGVS 454 (803)
Q Consensus 422 --------~~G~~~~l~~-~----~lvnP~d~~~~a~ai~~aL~~~ 454 (803)
+.+.+..+.+ + ++-+-.+++.+++++.++|..+
T Consensus 303 ~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 303 ARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 2233333322 1 2224456889999999999866
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.1e-06 Score=84.80 Aligned_cols=41 Identities=27% Similarity=0.442 Sum_probs=37.0
Q ss_pred EeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHc
Q 003682 693 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVI 736 (803)
Q Consensus 693 ~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~a 736 (803)
.+.+.+|+.+++.+++.+ +++++++++||||.||++|++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~---~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEES---KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHh---CCCHHHEEEEeCCHHHHHHHhcC
Confidence 366788999999999988 89999999999999999999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.28 E-value=9.2e-06 Score=82.03 Aligned_cols=39 Identities=26% Similarity=0.358 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
+|+.+++.+++.+ |+++++++++||+.+|++|++.+|..
T Consensus 147 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~D~~~a~~ag~~ 185 (201)
T TIGR01491 147 NKGEAVERLKREL---NPSLTETVAVGDSKNDLPMFEVADIS 185 (201)
T ss_pred cHHHHHHHHHHHh---CCCHHHEEEEcCCHhHHHHHHhcCCe
Confidence 5999999999998 99999999999999999999999974
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.7e-07 Score=93.23 Aligned_cols=64 Identities=17% Similarity=0.187 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------CccceeEeCCHhH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTAE 772 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------~s~A~~~v~~~~e 772 (803)
+...+.++++++ |++++++++|||+.+|+.+.+.+|. .++.|..|.. ...|.+.+++..+
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~~~igDs~~d~~aa~~aG~-----------~~i~v~~g~~~~~~l~~~~a~~~i~~~~~ 208 (213)
T TIGR01449 143 HPDPLLLAAERL---GVAPQQMVYVGDSRVDIQAARAAGC-----------PSVLLTYGYRYGEAIDLLPPDVLYDSLNE 208 (213)
T ss_pred ChHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHCCC-----------eEEEEccCCCCCcchhhcCCCeEeCCHHH
Confidence 567899999999 9999999999999999999999997 3466766642 2458889999998
Q ss_pred HHHH
Q 003682 773 ILRM 776 (803)
Q Consensus 773 v~~~ 776 (803)
+..+
T Consensus 209 l~~~ 212 (213)
T TIGR01449 209 LPPL 212 (213)
T ss_pred HHhh
Confidence 7664
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.7e-05 Score=84.06 Aligned_cols=71 Identities=10% Similarity=0.082 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHhhhCCCC-cccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------------------
Q 003682 699 KGLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------------------ 759 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~-~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------------------ 759 (803)
+...+..+++++ |+. ++++++|||+.+|+.+.+.+|. .+++|..|..
T Consensus 160 ~p~~~~~a~~~l---~~~~~~e~l~IGDs~~Di~aA~~aG~-----------~~i~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (267)
T PRK13478 160 YPWMALKNAIEL---GVYDVAACVKVDDTVPGIEEGLNAGM-----------WTVGVILSGNELGLSEEEYQALSAAELA 225 (267)
T ss_pred ChHHHHHHHHHc---CCCCCcceEEEcCcHHHHHHHHHCCC-----------EEEEEccCcccccCCHHHHHhcCHHHHH
Confidence 567888999998 985 6999999999999999999997 3477777743
Q ss_pred -----------CccceeEeCCHhHHHHHHHHHHHh
Q 003682 760 -----------PSKAKYYLDDTAEILRMLLGLAEA 783 (803)
Q Consensus 760 -----------~s~A~~~v~~~~ev~~~L~~l~~~ 783 (803)
...|.+.+++..++.++|..+...
T Consensus 226 ~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~~ 260 (267)
T PRK13478 226 ARRERARARLRAAGAHYVIDTIADLPAVIADIEAR 260 (267)
T ss_pred HHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHHH
Confidence 234788999999999888766443
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.2e-06 Score=78.99 Aligned_cols=51 Identities=16% Similarity=0.296 Sum_probs=41.7
Q ss_pred eEEEEecCCcCCCCCC---CCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHH
Q 003682 533 RAILLDYDGTIMVPGS---ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 584 (803)
Q Consensus 533 kli~~DlDGTLl~~~~---~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~ 584 (803)
|+|++|+||||+.... ....+.+.++++|+++ ++.|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l-~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHY-KALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHH-HHCCCEEEEECCCCchhhh
Confidence 7999999999997321 1134778999999998 7889999999999987654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.20 E-value=0.00058 Score=74.38 Aligned_cols=300 Identities=20% Similarity=0.268 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHHhhcCCCCCeEEEeCcc----ccchHH--HHHhhCCCCeEEEEEecC---------CCChhhhhcCCCc
Q 003682 122 VSVNKIFADKVMEVISPDDDFVWVHDYH----LMVLPT--FLRKRFNRVKLGFFLHSP---------FPSSEIYRTLPIR 186 (803)
Q Consensus 122 ~~vN~~fa~~i~~~~~~~~d~iwihDyh----l~llp~--~lr~~~~~~~i~~flH~p---------fP~~~~~~~lp~~ 186 (803)
.+.+.+|+- ......|++..||+|-=- ...+|- -||++.|+.+|..+.-|| |++.-..+-+|..
T Consensus 32 ~r~~eRfg~-~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFGF-YKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhcc-cCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 466777771 122334556899999554 333443 478899999999998776 4444333445633
Q ss_pred HH-HHHHH---hcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEE---------------------EEe
Q 003682 187 DE-LLRAL---LNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTV---------------------SIK 241 (803)
Q Consensus 187 ~~-il~~l---l~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~---------------------~v~ 241 (803)
.. .++.+ ...|+.-|.-.+.=-|++..|.+. |+. .+-.|+|-. ..-
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p--------~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li 181 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIP--------LVLVNARLSDRSFARYAKLKFLARLLFKNIDLI 181 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCC--------EEEEeeeechhhhHHHHHHHHHHHHHHHhccee
Confidence 22 22322 245666665555555666655442 111 111122111 111
Q ss_pred EecccCChhHHHHHhC---------------CchHHHHHHHHHHHhCC-CEEEEeecCcccccCHHHHHHHHHHHHHhCC
Q 003682 242 ILPVGIHIGQLQSVLN---------------LPETEAKVAELQDQFKG-QIVMLGVDDMDIFKGISLKLLAMEQLLSQNP 305 (803)
Q Consensus 242 v~p~Gid~~~f~~~~~---------------~~~~~~~~~~l~~~~~~-~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p 305 (803)
+.-.-.|.++|..... .+........+|.++++ +++++..+.- ..--.-.+.++..+++++|
T Consensus 182 ~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaSTH--~GEeei~l~~~~~l~~~~~ 259 (419)
T COG1519 182 LAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAASTH--EGEEEIILDAHQALKKQFP 259 (419)
T ss_pred eecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecCC--CchHHHHHHHHHHHHhhCC
Confidence 1122334444443221 12334556677888876 8999999883 3333447889999999999
Q ss_pred CCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC---C----CcccEEEecCCCCHHHHHHHHHhcccceec
Q 003682 306 SKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGR---P----GYQPVVLIDTPLQFYERIAYYVIAECCLVT 378 (803)
Q Consensus 306 ~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~---~----~~~~v~~~~~~~~~~~l~aly~~Adv~v~~ 378 (803)
+.. +++ . | +.|+ --..+++++.+.+-+++. . .-++ +++... .-|+..+|+.||++.+-
T Consensus 260 ~~l----lIl-V-P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~td-V~l~Dt--mGEL~l~y~~adiAFVG 324 (419)
T COG1519 260 NLL----LIL-V-P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTD-VLLGDT--MGELGLLYGIADIAFVG 324 (419)
T ss_pred Cce----EEE-e-c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCc-EEEEec--HhHHHHHHhhccEEEEC
Confidence 763 333 2 2 3343 345667777776654432 1 1123 344433 45999999999997654
Q ss_pred -cc--ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecc----cccccccC---CCCceeCCCCHHHHHHHHH
Q 003682 379 -AV--RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSE----FVGCSPSL---SGAIRVNPWNIDAVAEAMD 448 (803)
Q Consensus 379 -S~--~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~----~~G~~~~l---~~~~lvnP~d~~~~a~ai~ 448 (803)
|+ .-|.| ++|+.++ +.|+|... |.-+++.+ ++++.|+. .+.++.++.
T Consensus 325 GSlv~~GGHN--~LEpa~~-------------------~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v~ 381 (419)
T COG1519 325 GSLVPIGGHN--PLEPAAF-------------------GTPVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAVE 381 (419)
T ss_pred CcccCCCCCC--hhhHHHc-------------------CCCEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHHH
Confidence 33 34555 5799998 45566543 33444444 23566764 777777777
Q ss_pred HHhCCCHHHHHHHHHHhhcccccC
Q 003682 449 SALGVSDAEKQMRHEKHYRYVSTH 472 (803)
Q Consensus 449 ~aL~~~~~er~~r~~~~~~~v~~~ 472 (803)
..+.. +++|..+.++....+.++
T Consensus 382 ~l~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 382 LLLAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HhcCC-HHHHHHHHHHHHHHHHHh
Confidence 76664 777777777777666554
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.6e-05 Score=79.09 Aligned_cols=66 Identities=17% Similarity=0.108 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC-----Cccc--eeEeCCHh
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKA--KYYLDDTA 771 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~-----~s~A--~~~v~~~~ 771 (803)
+...+..+++.+ |++++++++|||+.+|+.+.+.+|.. ++.+..|.. ...+ .+++++..
T Consensus 105 ~p~~~~~~~~~l---~~~~~~~~~VgDs~~Di~~A~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ii~~l~ 170 (181)
T PRK08942 105 KPGMLLSIAERL---NIDLAGSPMVGDSLRDLQAAAAAGVT-----------PVLVRTGKGVTTLAEGAAPGTWVLDSLA 170 (181)
T ss_pred CHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhcccCCCceeecCHH
Confidence 566788888988 99999999999999999999999973 356666642 2235 78888888
Q ss_pred HHHHHHH
Q 003682 772 EILRMLL 778 (803)
Q Consensus 772 ev~~~L~ 778 (803)
++.++|.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 8877664
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.20 E-value=8.8e-06 Score=80.27 Aligned_cols=65 Identities=12% Similarity=0.145 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------------CccceeE
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------------PSKAKYY 766 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------------~s~A~~~ 766 (803)
+...+.++++++ +.+++++++|||+.+|+.+.+.+|. .++.|..|.. ...++|.
T Consensus 95 ~p~~~~~~~~~l---~~~p~~~i~IGD~~~Di~aA~~aGi-----------~~i~v~~g~~~~~~~~~~~~l~~~~~~~~ 160 (173)
T PRK06769 95 STGMLLQAAEKH---GLDLTQCAVIGDRWTDIVAAAKVNA-----------TTILVRTGAGYDALHTYRDKWAHIEPNYI 160 (173)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCC-----------eEEEEecCCCchhhhhhhcccccCCCcch
Confidence 556778888888 9999999999999999999999997 3467777642 1247778
Q ss_pred eCCHhHHHHHH
Q 003682 767 LDDTAEILRML 777 (803)
Q Consensus 767 v~~~~ev~~~L 777 (803)
+++..++.++|
T Consensus 161 ~~~~~el~~~l 171 (173)
T PRK06769 161 AENFEDAVNWI 171 (173)
T ss_pred hhCHHHHHHHH
Confidence 88888887765
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.1e-06 Score=87.80 Aligned_cols=74 Identities=18% Similarity=0.156 Sum_probs=56.3
Q ss_pred eEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC-
Q 003682 681 VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK- 759 (803)
Q Consensus 681 ~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~- 759 (803)
..+..+...-.-+| +...+.++++++ |++++++++|||+.+|+.+.+.+|. .+++|.+|..
T Consensus 152 d~iv~~~~~~~~KP----~p~~~~~a~~~~---~~~~~~~l~vgDs~~Di~aA~~aGi-----------~~i~v~~g~~~ 213 (248)
T PLN02770 152 QAVIIGSECEHAKP----HPDPYLKALEVL---KVSKDHTFVFEDSVSGIKAGVAAGM-----------PVVGLTTRNPE 213 (248)
T ss_pred cEEEecCcCCCCCC----ChHHHHHHHHHh---CCChhHEEEEcCCHHHHHHHHHCCC-----------EEEEEeCCCCH
Confidence 34444443333344 667889999999 9999999999999999999999997 3467777642
Q ss_pred ----CccceeEeCCHhH
Q 003682 760 ----PSKAKYYLDDTAE 772 (803)
Q Consensus 760 ----~s~A~~~v~~~~e 772 (803)
...|.+.+++..+
T Consensus 214 ~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 214 SLLMEAKPTFLIKDYED 230 (248)
T ss_pred HHHhhcCCCEEeccchh
Confidence 2468889998888
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=5.6e-06 Score=85.02 Aligned_cols=61 Identities=10% Similarity=0.046 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC---CccceeEeCCHhHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLDDTAEI 773 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~---~s~A~~~v~~~~ev 773 (803)
+.......++.+ |++++++++|||+.+|+.+.+.+|.. +++|..|.. ...|.+.+++..++
T Consensus 140 ~p~~~~~~~~~~---g~~p~~~l~igDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLL---GLAPQECVVVEDAPAGVLSGLAAGCH-----------VIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHc---CCCcccEEEEecchhhhHHHHHCCCE-----------EEEECCCCchhhhccCCEEecchhhe
Confidence 567888888988 99999999999999999999999872 355555432 24577788877765
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.14 E-value=3.6e-05 Score=79.07 Aligned_cols=72 Identities=19% Similarity=0.156 Sum_probs=48.5
Q ss_pred CCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeCCHhHHHH
Q 003682 696 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILR 775 (803)
Q Consensus 696 gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~~~~ev~~ 775 (803)
+..|..+++. + +..++++++|||+.||+.|.+.+|..++...+. ..-.....+.+.+++..++.+
T Consensus 146 ~~~K~~~l~~----~---~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~--------~~~~~~~~~~~~~~~f~ei~~ 210 (219)
T PRK09552 146 GCCKPSLIRK----L---SDTNDFHIVIGDSITDLEAAKQADKVFARDFLI--------TKCEELGIPYTPFETFHDVQT 210 (219)
T ss_pred CCchHHHHHH----h---ccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHH--------HHHHHcCCCccccCCHHHHHH
Confidence 3457766654 4 677889999999999999999998743211000 000122345566789999999
Q ss_pred HHHHHHH
Q 003682 776 MLLGLAE 782 (803)
Q Consensus 776 ~L~~l~~ 782 (803)
.|+++.+
T Consensus 211 ~l~~~~~ 217 (219)
T PRK09552 211 ELKHLLE 217 (219)
T ss_pred HHHHHhc
Confidence 9988764
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.11 E-value=5.5e-06 Score=85.38 Aligned_cols=66 Identities=20% Similarity=0.300 Sum_probs=49.6
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------CccceeEeC
Q 003682 695 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLD 768 (803)
Q Consensus 695 ~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------~s~A~~~v~ 768 (803)
.+.+|..+++.+++++ +. +++++|||+.||+.|.+.++.. +.+++|.. ...|++.++
T Consensus 152 ~~~~K~~~i~~~~~~~---~~--~~~i~iGDs~~Di~aa~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~ 214 (224)
T PLN02954 152 RSGGKAEAVQHIKKKH---GY--KTMVMIGDGATDLEARKPGGAD------------LFIGYGGVQVREAVAAKADWFVT 214 (224)
T ss_pred CCccHHHHHHHHHHHc---CC--CceEEEeCCHHHHHhhhcCCCC------------EEEecCCCccCHHHHhcCCEEEC
Confidence 3456999999999887 64 6899999999999997776542 34555531 134889999
Q ss_pred CHhHHHHHH
Q 003682 769 DTAEILRML 777 (803)
Q Consensus 769 ~~~ev~~~L 777 (803)
+.+++.++|
T Consensus 215 ~~~el~~~~ 223 (224)
T PLN02954 215 DFQDLIEVL 223 (224)
T ss_pred CHHHHHHhh
Confidence 999887764
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.7e-05 Score=81.52 Aligned_cols=65 Identities=17% Similarity=0.151 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhhhCCCC-cccEEEEeCChhhHHHHHHcchhcCCCCCCCCcce-EEEEeCCC------CccceeEeCCH
Q 003682 699 KGLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEV-FACTVGQK------PSKAKYYLDDT 770 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~-~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~-~~v~vG~~------~s~A~~~v~~~ 770 (803)
+...+..+++++ |++ ++++++|||+.+|+.+.+.+|.. + +++..|.. ...|.+.+++.
T Consensus 147 ~p~~~~~a~~~~---~~~~~~~~~~igD~~~Di~aa~~aG~~-----------~~i~~~~g~~~~~~~~~~~~~~~i~~~ 212 (220)
T TIGR03351 147 APDLILRAMELT---GVQDVQSVAVAGDTPNDLEAGINAGAG-----------AVVGVLTGAHDAEELSRHPHTHVLDSV 212 (220)
T ss_pred CHHHHHHHHHHc---CCCChhHeEEeCCCHHHHHHHHHCCCC-----------eEEEEecCCCcHHHHhhcCCceeecCH
Confidence 678999999998 987 79999999999999999999984 3 55666632 24577888888
Q ss_pred hHHHHHH
Q 003682 771 AEILRML 777 (803)
Q Consensus 771 ~ev~~~L 777 (803)
.++..++
T Consensus 213 ~~l~~~~ 219 (220)
T TIGR03351 213 ADLPALL 219 (220)
T ss_pred HHHHHhh
Confidence 8877654
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=98.09 E-value=2.8e-05 Score=81.77 Aligned_cols=65 Identities=15% Similarity=0.165 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHhhhCCCC-cccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------------------
Q 003682 699 KGLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------------------ 759 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~-~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------------------ 759 (803)
+...+...++++ |+. ++++++|||+.+|+.+.+.+|. .+++|.+|..
T Consensus 158 ~p~~~~~a~~~l---~~~~~~~~l~IGDs~~Di~aA~~aGi-----------~~i~v~~g~~~~~~~~~~~~~~~~~~~~ 223 (253)
T TIGR01422 158 APWMALKNAIEL---GVYDVAACVKVGDTVPDIEEGRNAGM-----------WTVGLILSSNELGLSEEEYRALDPAELE 223 (253)
T ss_pred CHHHHHHHHHHc---CCCCchheEEECCcHHHHHHHHHCCC-----------eEEEEecCCcccCCCHHHHHhCCHHHHH
Confidence 567788888988 985 9999999999999999999997 3578887753
Q ss_pred -----------CccceeEeCCHhHHHHHH
Q 003682 760 -----------PSKAKYYLDDTAEILRML 777 (803)
Q Consensus 760 -----------~s~A~~~v~~~~ev~~~L 777 (803)
...|++++++..++..+|
T Consensus 224 ~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 224 ARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 134788888888876654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.09 E-value=3.7e-06 Score=73.58 Aligned_cols=87 Identities=20% Similarity=0.253 Sum_probs=71.1
Q ss_pred cceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCCC---CceeCCCCHHHHHHHHHHH
Q 003682 374 CCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLSG---AIRVNPWNIDAVAEAMDSA 450 (803)
Q Consensus 374 v~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~---~~lvnP~d~~~~a~ai~~a 450 (803)
+++.|+..+|+++..+|+||| |+|+|.+...+..+.+.. ++.++ |+++++++|..+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~-------------------G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~l 59 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC-------------------GTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYL 59 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC-------------------CCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHH
Confidence 467788889999999999999 677888778888888833 56776 899999999999
Q ss_pred hCCCHHHHHHHHHHhhcccc-cCCHHHHHHHHH
Q 003682 451 LGVSDAEKQMRHEKHYRYVS-THDVAYWARSFL 482 (803)
Q Consensus 451 L~~~~~er~~r~~~~~~~v~-~~~~~~W~~~~l 482 (803)
++ .+++++...++.++++. .|++.+-+++++
T Consensus 60 l~-~~~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 60 LE-NPEERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99 55667777777777776 689888888876
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.1e-05 Score=84.14 Aligned_cols=70 Identities=19% Similarity=0.249 Sum_probs=54.7
Q ss_pred CCeEEEEecCCcCCCCCCCCCCC---CHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC--C-CcEEecCcEEEE
Q 003682 531 KNRAILLDYDGTIMVPGSISTSP---NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE--G-LGIAAEHGYFVR 604 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~i---s~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~--~-l~lia~nGa~i~ 604 (803)
..++|+|||||||++ ..+.+ ++.+.++|.+| ++.|+.++|+|+++...+...++.+. . ...+..+|....
T Consensus 125 ~~kvIvFDLDgTLi~---~~~~v~irdPgV~EaL~~L-kekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~ 200 (301)
T TIGR01684 125 PPHVVVFDLDSTLIT---DEEPVRIRDPRIYDSLTEL-KKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE 200 (301)
T ss_pred cceEEEEecCCCCcC---CCCccccCCHHHHHHHHHH-HHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence 468999999999999 55554 69999999999 99999999999999998888876542 1 134555555443
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=7e-06 Score=84.50 Aligned_cols=62 Identities=11% Similarity=0.075 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC-----ccceeEeCCHhHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP-----SKAKYYLDDTAEI 773 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~-----s~A~~~v~~~~ev 773 (803)
+...++.+++.+ |++++++++|||+.+|+++.+.+|.. ++.+.-+... ..|.+++.+..++
T Consensus 150 ~~~~~~~~~~~~---~~~~~~~~~igDs~~Di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~~~dl 215 (222)
T PRK10826 150 HPEVYLNCAAKL---GVDPLTCVALEDSFNGMIAAKAARMR-----------SIVVPAPEQQNDPRWALADVKLESLTEL 215 (222)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCChhhHHHHHHcCCE-----------EEEecCCccCchhhhhhhheeccCHHHH
Confidence 567899999999 99999999999999999999999973 3444444321 2567777777776
Q ss_pred H
Q 003682 774 L 774 (803)
Q Consensus 774 ~ 774 (803)
.
T Consensus 216 ~ 216 (222)
T PRK10826 216 T 216 (222)
T ss_pred h
Confidence 4
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.2e-05 Score=82.66 Aligned_cols=61 Identities=15% Similarity=0.217 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCCh-hhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC-------ccceeEeCCH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP-------SKAKYYLDDT 770 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~-NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~-------s~A~~~v~~~ 770 (803)
+....+.+++++ |++++++++|||+. +|+.+.+.+|.. ++.|..|... ..+.+.+++.
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igDs~~~di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~~~~i~~~ 217 (221)
T TIGR02253 152 HPKIFYAALKRL---GVKPEEAVMVGDRLDKDIKGAKNLGMK-----------TVWINQGKSSKMEDDVYPYPDYEISSL 217 (221)
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCChHHHHHHHHHCCCE-----------EEEECCCCCcccccccccCCCeeeCcH
Confidence 567889999999 99999999999997 999999999972 3445444321 2356777777
Q ss_pred hHH
Q 003682 771 AEI 773 (803)
Q Consensus 771 ~ev 773 (803)
.++
T Consensus 218 ~el 220 (221)
T TIGR02253 218 REL 220 (221)
T ss_pred Hhh
Confidence 664
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=98.00 E-value=2.8e-05 Score=85.23 Aligned_cols=71 Identities=11% Similarity=0.148 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC---CccceeEeCCHhHH-H
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK---PSKAKYYLDDTAEI-L 774 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~---~s~A~~~v~~~~ev-~ 774 (803)
+.......++.+ |+.++++++|||+.+|+.+.+.+|. .+++|..+.. ...|.+.+++.+++ .
T Consensus 274 ~Peifl~A~~~l---gl~Peecl~IGDS~~DIeAAk~AGm-----------~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 274 DPEMFIYAAQLL---NFIPERCIVFGNSNQTVEAAHDARM-----------KCVAVASKHPIYELGAADLVVRRLDELSI 339 (381)
T ss_pred CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCC-----------EEEEECCCCChhHhcCCCEEECCHHHHHH
Confidence 677889999999 9999999999999999999999997 3456654431 13588899999998 5
Q ss_pred HHHHHHHHh
Q 003682 775 RMLLGLAEA 783 (803)
Q Consensus 775 ~~L~~l~~~ 783 (803)
..|+.|...
T Consensus 340 ~~l~~l~~~ 348 (381)
T PLN02575 340 VDLKNLADI 348 (381)
T ss_pred HHHhhhhhc
Confidence 666666653
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=3.1e-05 Score=81.58 Aligned_cols=64 Identities=13% Similarity=0.144 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC----CccceeEeCCHhHHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEIL 774 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~----~s~A~~~v~~~~ev~ 774 (803)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. +++|. |.. ...|.+.+++..++.
T Consensus 167 ~Pe~~~~a~~~l---~~~p~~~l~IgDs~~Di~aA~~aG~~-----------~i~v~-g~~~~~~l~~ad~vi~~~~el~ 231 (260)
T PLN03243 167 DPEMFMYAAERL---GFIPERCIVFGNSNSSVEAAHDGCMK-----------CVAVA-GKHPVYELSAGDLVVRRLDDLS 231 (260)
T ss_pred CHHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHcCCE-----------EEEEe-cCCchhhhccCCEEeCCHHHHH
Confidence 567889999999 99999999999999999999999973 35554 432 245788899998876
Q ss_pred HHH
Q 003682 775 RML 777 (803)
Q Consensus 775 ~~L 777 (803)
..+
T Consensus 232 ~~~ 234 (260)
T PLN03243 232 VVD 234 (260)
T ss_pred HHH
Confidence 544
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=97.96 E-value=4e-05 Score=71.56 Aligned_cols=54 Identities=20% Similarity=0.239 Sum_probs=41.8
Q ss_pred eEEEEecCCcCCCCCC--CCC-------CCCHHHHHHHHHHhcCCCCeEEEEcCC-ChhhHHHHh
Q 003682 533 RAILLDYDGTIMVPGS--IST-------SPNAEAVAILDNLCRDPKNVVFLVSGK-DRDTLAEWF 587 (803)
Q Consensus 533 kli~~DlDGTLl~~~~--~~~-------~is~~~~~aL~~L~~~~g~~v~IaTGR-~~~~l~~~~ 587 (803)
|+|++|+||||++... ... .+-+.+.+.|+.| +++|+.++|+|++ +...+...+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L-k~~g~~l~i~Sn~~~~~~~~~~l 64 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTL-KKNGFLLALASYNDDPHVAYELL 64 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHH-HHCCeEEEEEeCCCCHHHHHHHH
Confidence 6899999999998420 011 2467999999998 8899999999999 666555555
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.8e-05 Score=84.65 Aligned_cols=62 Identities=13% Similarity=0.083 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC----ccceeEeCCHhHHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP----SKAKYYLDDTAEIL 774 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~----s~A~~~v~~~~ev~ 774 (803)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. +++|..|... ..|++++++..++.
T Consensus 204 ~p~~~~~a~~~~---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~ad~vi~~~~~l~ 269 (286)
T PLN02779 204 DPDIYNLAAETL---GVDPSRCVVVEDSVIGLQAAKAAGMR-----------CIVTKSSYTADEDFSGADAVFDCLGDVP 269 (286)
T ss_pred CHHHHHHHHHHh---CcChHHEEEEeCCHHhHHHHHHcCCE-----------EEEEccCCccccccCCCcEEECChhhcc
Confidence 466889999999 99999999999999999999999973 4667666321 35888888887765
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.0001 Score=74.59 Aligned_cols=63 Identities=13% Similarity=0.088 Sum_probs=43.7
Q ss_pred CCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC---ccce-e-EeCCHh
Q 003682 697 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP---SKAK-Y-YLDDTA 771 (803)
Q Consensus 697 v~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~---s~A~-~-~v~~~~ 771 (803)
-.|...++.+. .. + .+++++|||.||++|++.+|.. |++..++ ..|. + .+.+.+
T Consensus 131 ~~K~~~l~~l~-~~---~---~~~v~vGDs~nDl~ml~~Ag~~--------------ia~~ak~~~~~~~~~~~~~~~~~ 189 (203)
T TIGR02137 131 DPKRQSVIAFK-SL---Y---YRVIAAGDSYNDTTMLSEAHAG--------------ILFHAPENVIREFPQFPAVHTYE 189 (203)
T ss_pred chHHHHHHHHH-hh---C---CCEEEEeCCHHHHHHHHhCCCC--------------EEecCCHHHHHhCCCCCcccCHH
Confidence 46988888874 44 4 3799999999999999999974 4555443 2222 2 346777
Q ss_pred HHHHHHHHH
Q 003682 772 EILRMLLGL 780 (803)
Q Consensus 772 ev~~~L~~l 780 (803)
+++..+..-
T Consensus 190 ~~~~~~~~~ 198 (203)
T TIGR02137 190 DLKREFLKA 198 (203)
T ss_pred HHHHHHHHH
Confidence 777766654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=97.87 E-value=9.4e-05 Score=83.38 Aligned_cols=122 Identities=10% Similarity=0.065 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecCCCCHHHHHHHHH
Q 003682 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYV 370 (803)
Q Consensus 291 ~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~ 370 (803)
...|+|++.+.++.|++. |=+ |.++ + +...+.++ .+ | ..++.+.+ +...++..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~t--e------~s~kL~~L-~~----y-----~nvvly~~-~~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALT--E------MSSKLMSL-DK----Y-----DNVKLYPN-ITTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecC--c------ccHHHHHH-Hh----c-----CCcEEECC-cChHHHHHHHH
Confidence 889999999999999987 544 4333 1 11333333 12 2 24666665 44567999999
Q ss_pred hcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccc-cccccCCCCceeCCCCHHHHHHHHHH
Q 003682 371 IAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFV-GCSPSLSGAIRVNPWNIDAVAEAMDS 449 (803)
Q Consensus 371 ~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~-G~~~~l~~~~lvnP~d~~~~a~ai~~ 449 (803)
.||+++.+|..||+++...||+.. |-|++.-+.. |..+.+.+|.++++.|+++|+++|.+
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~-------------------G~pI~afd~t~~~~~~i~~g~l~~~~~~~~m~~~i~~ 407 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY-------------------NLLILGFEETAHNRDFIASENIFEHNEVDQLISKLKD 407 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc-------------------CCcEEEEecccCCcccccCCceecCCCHHHHHHHHHH
Confidence 999999999999999999999996 3445555554 45555567999999999999999999
Q ss_pred HhCCCH
Q 003682 450 ALGVSD 455 (803)
Q Consensus 450 aL~~~~ 455 (803)
+|+.+.
T Consensus 408 lL~d~~ 413 (438)
T TIGR02919 408 LLNDPN 413 (438)
T ss_pred HhcCHH
Confidence 998764
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.84 E-value=5.2e-05 Score=75.04 Aligned_cols=63 Identities=14% Similarity=0.084 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC-----ccceeEeCCHhHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP-----SKAKYYLDDTAEI 773 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~-----s~A~~~v~~~~ev 773 (803)
+...+..+++++ |++++++++|||+.+|+...+.+|.. .++.|..|... ..|++++++..++
T Consensus 108 ~p~~~~~a~~~~---~~~~~~~v~VGDs~~Di~aA~~aG~~----------~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 108 KPGMLLQARKEL---HIDMAQSYMVGDKLEDMQAGVAAKVK----------TNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CHHHHHHHHHHc---CcChhhEEEEcCCHHHHHHHHHCCCc----------EEEEEecCCcccccccccCCEEeccHHHh
Confidence 566778888888 99999999999999999999999973 11466677431 3488999988877
Q ss_pred H
Q 003682 774 L 774 (803)
Q Consensus 774 ~ 774 (803)
.
T Consensus 175 ~ 175 (176)
T TIGR00213 175 P 175 (176)
T ss_pred h
Confidence 5
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.79 E-value=3.7e-05 Score=88.15 Aligned_cols=66 Identities=18% Similarity=0.162 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC----CccceeEeCCHhHHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEIL 774 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~----~s~A~~~v~~~~ev~ 774 (803)
|...+...++++ +++++++|||+.+|+.+.+.+|.. +++|..|.. ...|+|.+++..++.
T Consensus 387 kP~~~~~al~~l-----~~~~~v~VGDs~~Di~aAk~AG~~-----------~I~v~~~~~~~~~~~~~d~~i~~l~el~ 450 (459)
T PRK06698 387 KSDLVKSILNKY-----DIKEAAVVGDRLSDINAAKDNGLI-----------AIGCNFDFAQEDELAQADIVIDDLLELK 450 (459)
T ss_pred CcHHHHHHHHhc-----CcceEEEEeCCHHHHHHHHHCCCe-----------EEEEeCCCCcccccCCCCEEeCCHHHHH
Confidence 666788888765 468999999999999999999973 356666632 245889999999998
Q ss_pred HHHHHH
Q 003682 775 RMLLGL 780 (803)
Q Consensus 775 ~~L~~l 780 (803)
+++..+
T Consensus 451 ~~l~~~ 456 (459)
T PRK06698 451 GILSTV 456 (459)
T ss_pred HHHHHH
Confidence 877543
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=6.4e-05 Score=78.51 Aligned_cols=70 Identities=20% Similarity=0.245 Sum_probs=54.3
Q ss_pred CCeEEEEecCCcCCCCCCCCCCC---CHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCC--C-CcEEecCcEEEE
Q 003682 531 KNRAILLDYDGTIMVPGSISTSP---NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE--G-LGIAAEHGYFVR 604 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~i---s~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~--~-l~lia~nGa~i~ 604 (803)
..++|+||+||||++ .+..+ ++.+.++|++| ++.|+.++|+|+.+...+...++.+. . ...+..+|....
T Consensus 127 ~~~~i~~D~D~TL~~---~~~~v~irdp~V~EtL~eL-kekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~ 202 (303)
T PHA03398 127 IPHVIVFDLDSTLIT---DEEPVRIRDPFVYDSLDEL-KERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAG 202 (303)
T ss_pred eccEEEEecCCCccC---CCCccccCChhHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCccc
Confidence 358999999999999 66666 79999999999 89999999999888888888776542 1 123444554443
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00014 Score=69.79 Aligned_cols=37 Identities=19% Similarity=0.138 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
|...++.+++.+ +++++++++|||+..|+.+.+.+|.
T Consensus 103 ~~~~~~~~~~~~---~~~~~e~i~IGDs~~Di~~A~~~Gi 139 (147)
T TIGR01656 103 KPGLILEALKRL---GVDASRSLVVGDRLRDLQAARNAGL 139 (147)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHCCC
Confidence 677888999998 9999999999999999999999987
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=5e-05 Score=78.22 Aligned_cols=66 Identities=20% Similarity=0.095 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHhhhCCCC-cccEEEEeCCh-hhHHHHHHcchhcCCCCCCCCcceEEEEeCC-C---CccceeEeCCHhH
Q 003682 699 KGLVAQHQLETMHQKGML-PDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ-K---PSKAKYYLDDTAE 772 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~-~d~vla~GD~~-NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~-~---~s~A~~~v~~~~e 772 (803)
+.....++++++ |+. ++++++|||+. +|+...+.+|.. ++.+..+. . ...+.+.+++..+
T Consensus 152 ~p~~~~~~~~~~---~~~~~~~~~~vgD~~~~Di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~i~~~~e 217 (224)
T PRK09449 152 DVAIFDYALEQM---GNPDRSRVLMVGDNLHSDILGGINAGID-----------TCWLNAHGREQPEGIAPTYQVSSLSE 217 (224)
T ss_pred CHHHHHHHHHHc---CCCCcccEEEEcCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCeEEECCHHH
Confidence 566888999998 874 58999999997 799999999973 23343222 1 1357888999999
Q ss_pred HHHHHH
Q 003682 773 ILRMLL 778 (803)
Q Consensus 773 v~~~L~ 778 (803)
+.++|.
T Consensus 218 l~~~l~ 223 (224)
T PRK09449 218 LEQLLC 223 (224)
T ss_pred HHHHHh
Confidence 988764
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00079 Score=66.19 Aligned_cols=58 Identities=21% Similarity=0.389 Sum_probs=45.7
Q ss_pred ccCCCHHHHHHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCC
Q 003682 515 FRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKD 579 (803)
Q Consensus 515 ~~~l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~ 579 (803)
+..++.+.+ ++..++++++|+||||+.. ....+.+.+.++|++| ++.|..++|+|+.+
T Consensus 12 ~~~i~~~~~----~~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~L-k~~g~~l~I~Sn~~ 69 (170)
T TIGR01668 12 LNDLTIDLL----KKVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEEL-KAAGRKLLIVSNNA 69 (170)
T ss_pred hhhCCHHHH----HHCCCCEEEEecCCccccC--CCCCcChhHHHHHHHH-HHcCCEEEEEeCCc
Confidence 334555544 3467899999999999983 2336788999999998 88899999999987
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00015 Score=70.90 Aligned_cols=50 Identities=20% Similarity=0.290 Sum_probs=37.7
Q ss_pred hcCCeEEEEecCCcCCCCCCCCCC---------CCHHHHHHHHHHhcCCCCeEEEEcCCC
Q 003682 529 RTKNRAILLDYDGTIMVPGSISTS---------PNAEAVAILDNLCRDPKNVVFLVSGKD 579 (803)
Q Consensus 529 ~~~~kli~~DlDGTLl~~~~~~~~---------is~~~~~aL~~L~~~~g~~v~IaTGR~ 579 (803)
.|+.|++++|+||||+...+.... +-+.+.++|++| ++.|+.++|+|..+
T Consensus 10 ~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-k~~G~~l~I~TN~~ 68 (166)
T TIGR01664 10 KPQSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQEL-DDEGYKIVIFTNQS 68 (166)
T ss_pred CCcCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHH-HHCCCEEEEEeCCc
Confidence 356799999999999973211111 237789999998 88899999999754
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00026 Score=73.01 Aligned_cols=70 Identities=16% Similarity=0.072 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC--CccceeEeCCHhHHHHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--PSKAKYYLDDTAEILRM 776 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~--~s~A~~~v~~~~ev~~~ 776 (803)
+.....++++++ |++++++++|||+.+|+...+.+|... +++|..+.. ...+.....+.+++.++
T Consensus 151 ~p~~~~~~~~~~---~~~p~~~l~igDs~~di~aA~~aG~~~----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 217 (224)
T PRK14988 151 DQRLWQAVAEHT---GLKAERTLFIDDSEPILDAAAQFGIRY----------CLGVTNPDSGIAEKQYQRHPSLNDYRRL 217 (224)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCeE----------EEEEeCCCCCccchhccCCCcHHHHHHH
Confidence 467889999999 999999999999999999999999731 244555543 23344455777888887
Q ss_pred HHHHH
Q 003682 777 LLGLA 781 (803)
Q Consensus 777 L~~l~ 781 (803)
|+.|.
T Consensus 218 ~~~l~ 222 (224)
T PRK14988 218 IPSLM 222 (224)
T ss_pred hhhhc
Confidence 77664
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00022 Score=71.81 Aligned_cols=60 Identities=17% Similarity=0.102 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHc--chhcCCCCCCCCcceEEEEeCCCC--ccceeEeCCHhHHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVI--KSAAAGPSLSPVAEVFACTVGQKP--SKAKYYLDDTAEIL 774 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~a--g~s~a~~~~~~~~~~~~v~vG~~~--s~A~~~v~~~~ev~ 774 (803)
|...+..+++++ | ++.+++|||+.+|+...+.+ |. .++.|.+|... -.+.|.+++..|+.
T Consensus 132 kp~~~~~a~~~~---~--~~~~v~vgDs~~di~aA~~a~~Gi-----------~~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 132 KEKLFIKAKEKY---G--DRVVCFVDDLAHNLDAAHEALSQL-----------PVIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cHHHHHHHHHHh---C--CCcEEEeCCCHHHHHHHHHHHcCC-----------cEEEecchhhccccchhhhhccHHHHh
Confidence 678999999998 7 78899999999999999998 87 34777777632 25557777777664
|
2 hypothetical protein; Provisional |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00024 Score=69.07 Aligned_cols=37 Identities=19% Similarity=0.097 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
|...+..+++.+ +++++++++|||+.+|+.+.+.+|.
T Consensus 105 ~~~~~~~~~~~~---~~~~~e~l~IGD~~~Di~~A~~aGi 141 (161)
T TIGR01261 105 KIKLLEPYLKKN---LIDKARSYVIGDRETDMQLAENLGI 141 (161)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCC
Confidence 667888899988 9999999999999999999999997
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00095 Score=72.07 Aligned_cols=56 Identities=23% Similarity=0.388 Sum_probs=46.4
Q ss_pred CeEEEEecCCcCCCCCCC---------CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhh
Q 003682 532 NRAILLDYDGTIMVPGSI---------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 588 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~---------~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~ 588 (803)
.+++++|+||||...... +..+.+.+.++|++| ++.|..++++|||+....+..+.
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~i~T~r~~~~~~~~l~ 222 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMY-KAAGYEIIVVSGRDGVCEEDTVE 222 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHH-HhCCCEEEEEeCCChhhHHHHHH
Confidence 579999999999973211 346788999999999 88899999999999988877764
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00036 Score=69.46 Aligned_cols=43 Identities=26% Similarity=0.247 Sum_probs=34.6
Q ss_pred EeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcC
Q 003682 693 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 741 (803)
Q Consensus 693 ~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a 741 (803)
.+.|..|+..++.+.+.. +++++++||+.||+++.+.++..+|
T Consensus 144 ~~~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCCcccc
Confidence 355678988888887642 6889999999999999999987543
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00017 Score=80.27 Aligned_cols=62 Identities=15% Similarity=0.047 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC----CccceeEeCCHhHHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEIL 774 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~----~s~A~~~v~~~~ev~ 774 (803)
+......+++.+ |++++++++|||+.+|+.+.+.+|.. +++|+.|.. ...|.+.+++..++.
T Consensus 152 ~p~~~~~a~~~l---gv~p~~~l~VGDs~~Di~aA~~aGi~-----------~I~v~~g~~~~~~~~~ad~~i~sl~el~ 217 (382)
T PLN02940 152 SPDIFLEAAKRL---NVEPSNCLVIEDSLPGVMAGKAAGME-----------VIAVPSIPKQTHLYSSADEVINSLLDLQ 217 (382)
T ss_pred CHHHHHHHHHHc---CCChhHEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCcchhhccCccEEeCCHhHcC
Confidence 678899999999 99999999999999999999999973 456666542 245777888877754
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00052 Score=71.75 Aligned_cols=49 Identities=18% Similarity=0.308 Sum_probs=40.7
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHH
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 584 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~ 584 (803)
+++.++||+||||.. ...+-+...++|++| +++|.+++++|-.+..+-+
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L-~~~g~~~iflTNn~~~s~~ 55 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRL-KAAGKPVIFLTNNSTRSRE 55 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHH-HHcCCeEEEEeCCCCCCHH
Confidence 458899999999997 556678999999999 9999999999876655444
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0056 Score=63.64 Aligned_cols=50 Identities=26% Similarity=0.379 Sum_probs=41.9
Q ss_pred EEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEc---CCChhhHHHHhhc
Q 003682 535 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVS---GKDRDTLAEWFSS 589 (803)
Q Consensus 535 i~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaT---GR~~~~l~~~~~~ 589 (803)
++||+||||++ .... .+.+.++|+.+ ++.|.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~---~~~~-~~~a~e~i~~l-~~~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWL---GHKP-IPGAAEALNRL-RAKGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCc---CCcc-CcCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 58999999998 4444 45889999998 88899999998 8999988877754
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0016 Score=64.74 Aligned_cols=37 Identities=14% Similarity=0.165 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
+....+++++++ +++++++++|||+.+|+.+.+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~v~vgD~~~di~aA~~aG~ 179 (185)
T TIGR01990 143 DPEIFLAAAEGL---GVSPSECIGIEDAQAGIEAIKAAGM 179 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEecCHHHHHHHHHcCC
Confidence 677889999999 9999999999999999999999987
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0033 Score=61.72 Aligned_cols=56 Identities=21% Similarity=0.178 Sum_probs=43.0
Q ss_pred CeEEEEecCCcCCCCCC------C-----------------CCCCCHHHHHHHHHHhcCCCCeEEEEcCC-ChhhHHHHh
Q 003682 532 NRAILLDYDGTIMVPGS------I-----------------STSPNAEAVAILDNLCRDPKNVVFLVSGK-DRDTLAEWF 587 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~------~-----------------~~~is~~~~~aL~~L~~~~g~~v~IaTGR-~~~~l~~~~ 587 (803)
.||++||+|+||.++.. . ...+-+.+.+.|+.| +++|..++|+|+. +...++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~L-k~~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTL-KDAGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHH-HHCCCEEEEEeCCCChHHHHHHH
Confidence 68999999999998541 0 012347888999998 8889999999988 777776666
Q ss_pred h
Q 003682 588 S 588 (803)
Q Consensus 588 ~ 588 (803)
.
T Consensus 81 ~ 81 (174)
T TIGR01685 81 G 81 (174)
T ss_pred H
Confidence 3
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00046 Score=68.84 Aligned_cols=37 Identities=11% Similarity=-0.005 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
+...+.++++++ |++++++++|||+.+|+...+.+|.
T Consensus 144 ~p~~~~~~~~~~---~~~~~~~l~igDs~~di~aA~~aG~ 180 (188)
T PRK10725 144 APDTFLRCAQLM---GVQPTQCVVFEDADFGIQAARAAGM 180 (188)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeccHhhHHHHHHCCC
Confidence 667899999999 9999999999999999999999997
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.00087 Score=68.39 Aligned_cols=38 Identities=13% Similarity=0.179 Sum_probs=28.6
Q ss_pred CCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 696 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 696 gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
|-.|...++.. + +.+.+...+.|||.||++||+.+++.
T Consensus 161 g~~K~~~l~~~---~---~~~~~~~~aY~Ds~~D~pmL~~a~~~ 198 (211)
T PRK11590 161 GHEKVAQLERK---I---GTPLRLYSGYSDSKQDNPLLYFCQHR 198 (211)
T ss_pred ChHHHHHHHHH---h---CCCcceEEEecCCcccHHHHHhCCCC
Confidence 44565555544 3 45667789999999999999999974
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.004 Score=67.89 Aligned_cols=115 Identities=13% Similarity=0.120 Sum_probs=81.2
Q ss_pred CCeEEEEecCCcCCCCC--CC------CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEE
Q 003682 531 KNRAILLDYDGTIMVPG--SI------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYF 602 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~--~~------~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~ 602 (803)
.+|+|++|+|+||.... .. -..+.+.+.++|++| +++|+.++|||..+...+...+...+.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L-~~~Gi~lai~S~n~~~~a~~~l~~~~~---------- 70 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTL-KKQGFLLALASKNDEDDAKKVFERRKD---------- 70 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHhCcc----------
Confidence 37999999999998732 01 012347899999998 889999999999988887777632100
Q ss_pred EEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeE
Q 003682 603 VRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS 682 (803)
Q Consensus 603 i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~ 682 (803)
+... .++| ..
T Consensus 71 -----------~~~~------------~~~f-----------------------------------------------~~ 80 (320)
T TIGR01686 71 -----------FILQ------------AEDF-----------------------------------------------DA 80 (320)
T ss_pred -----------ccCc------------HHHe-----------------------------------------------eE
Confidence 0000 0000 00
Q ss_pred EEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 683 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 683 v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
+..+ .. .|...++.+++.+ |++++++++|||+..|+.+.+.+.-
T Consensus 81 ~~~~-----~~----pk~~~i~~~~~~l---~i~~~~~vfidD~~~d~~~~~~~lp 124 (320)
T TIGR01686 81 RSIN-----WG----PKSESLRKIAKKL---NLGTDSFLFIDDNPAERANVKITLP 124 (320)
T ss_pred EEEe-----cC----chHHHHHHHHHHh---CCCcCcEEEECCCHHHHHHHHHHCC
Confidence 0001 12 4999999999999 9999999999999999999988653
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0029 Score=74.40 Aligned_cols=64 Identities=11% Similarity=0.185 Sum_probs=51.2
Q ss_pred HHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCC-CeEEEEcCCChhhHHHHhhcC
Q 003682 526 AYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPK-NVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 526 ~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g-~~v~IaTGR~~~~l~~~~~~l 590 (803)
.+.....+.+++..||+++..-.-...+-+...++|++| ++.| +.++++||.+...++...+++
T Consensus 358 ~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L-~~~g~i~v~ivTgd~~~~a~~i~~~l 422 (556)
T TIGR01525 358 EGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAAL-KRAGGIKLVMLTGDNRSAAEAVAAEL 422 (556)
T ss_pred HHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHH-HHcCCCeEEEEeCCCHHHHHHHHHHh
Confidence 344556788999999988752213456789999999998 8889 999999999999998888543
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.00028 Score=72.47 Aligned_cols=38 Identities=11% Similarity=0.048 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
+......+++++ |++++++++|||+.+|+...+.+|..
T Consensus 144 ~p~~~~~a~~~~---~~~p~~~l~igDs~~di~aA~~aG~~ 181 (221)
T PRK10563 144 DPALMFHAAEAM---NVNVENCILVDDSSAGAQSGIAAGME 181 (221)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCCE
Confidence 678899999999 99999999999999999999999973
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.00014 Score=72.38 Aligned_cols=37 Identities=11% Similarity=0.045 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
+....+++++++ +++++++++|||+.+|+.+.+.+|.
T Consensus 144 ~~~~~~~~~~~~---~~~~~~~v~IgD~~~di~aA~~~G~ 180 (185)
T TIGR02009 144 HPETFLLAAELL---GVSPNECVVFEDALAGVQAARAAGM 180 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCC
Confidence 456788899998 9999999999999999999999987
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.00085 Score=62.84 Aligned_cols=55 Identities=20% Similarity=0.285 Sum_probs=42.9
Q ss_pred eEEEEecCCcCCCCCC-----CCCCCCHHHHHHHHHHhcCCCCeEEEEcCCC--------hhhHHHHhh
Q 003682 533 RAILLDYDGTIMVPGS-----ISTSPNAEAVAILDNLCRDPKNVVFLVSGKD--------RDTLAEWFS 588 (803)
Q Consensus 533 kli~~DlDGTLl~~~~-----~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~--------~~~l~~~~~ 588 (803)
|+++||+||||++... ....+.+.+.++|+.| ++.|+.++|+|+++ ...++..+.
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L-~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~ 68 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAEL-KEAGYKVVIVTNQSGIGRGKFSSGRVARRLE 68 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHH-HHCCCEEEEEECCccccccHHHHHHHHHHHH
Confidence 6899999999996210 1245678899999998 88899999999998 555666554
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.001 Score=64.07 Aligned_cols=35 Identities=26% Similarity=0.328 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcc
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK 737 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag 737 (803)
+...+.++++++ |+++ ++++|||+.+|+.+.+.+|
T Consensus 120 ~~~~~~~~~~~~---~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 120 EPEIFLAALESL---GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHHc---CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 678899999999 9998 9999999999999988775
|
HAD subfamilies caused by an overly broad single model. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0094 Score=65.20 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
|...+..+++.+ +++++++++|||+.+|+...+.+|..
T Consensus 106 ~p~~l~~a~~~l---~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 106 KTGLVEEYLAEG---AIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 566788888887 89999999999999999999999973
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0023 Score=66.16 Aligned_cols=69 Identities=16% Similarity=0.268 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHhcCCeEEEEecCCcCCCCCC---CCCC-CCH---------------------------HHHHHHHHHhc
Q 003682 518 LSIDHIVSAYKRTKNRAILLDYDGTIMVPGS---ISTS-PNA---------------------------EAVAILDNLCR 566 (803)
Q Consensus 518 l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~---~~~~-is~---------------------------~~~~aL~~L~~ 566 (803)
.+++++.++....+.-.|+|||||||+++.+ .... +++ ...+.|+.+ +
T Consensus 49 ~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l-~ 127 (237)
T TIGR01672 49 ISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMH-Q 127 (237)
T ss_pred EEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHH-H
Confidence 5678888887666656999999999998543 1001 121 267788887 8
Q ss_pred CCCCeEEEEcCC----ChhhHHHHh
Q 003682 567 DPKNVVFLVSGK----DRDTLAEWF 587 (803)
Q Consensus 567 ~~g~~v~IaTGR----~~~~l~~~~ 587 (803)
++|+.++++|+| ....++.++
T Consensus 128 ~~G~~i~iVTnr~~~k~~~~a~~ll 152 (237)
T TIGR01672 128 RRGDAIFFVTGRTPGKTDTVSKTLA 152 (237)
T ss_pred HCCCEEEEEeCCCCCcCHHHHHHHH
Confidence 889999999999 333444444
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.00092 Score=67.64 Aligned_cols=37 Identities=27% Similarity=0.275 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCCh-hhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~-NDi~Mf~~ag~ 738 (803)
+....+++++.+ |++++++++|||+. +|+...+.+|.
T Consensus 162 ~~~~~~~~~~~~---~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 162 DPKIFQEALERA---GISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred CHHHHHHHHHHc---CCChhHEEEECCCchHHHHHHHHcCC
Confidence 345788899999 99999999999997 99999999986
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.006 Score=75.28 Aligned_cols=64 Identities=19% Similarity=0.242 Sum_probs=47.8
Q ss_pred HHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 525 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 525 ~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
+.+.....+++++-.||+++..-.-...+-+...++|++| ++.|+.++++||.+....+.+.+.
T Consensus 623 ~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L-~~~gi~v~~~Tgd~~~~a~~ia~~ 686 (834)
T PRK10671 623 TAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRL-HKAGYRLVMLTGDNPTTANAIAKE 686 (834)
T ss_pred HHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHH
Confidence 3344455678888889987631112345667888999998 888999999999999998888754
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0056 Score=71.61 Aligned_cols=60 Identities=17% Similarity=0.204 Sum_probs=46.6
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCC-eEEEEcCCChhhHHHHhhcC
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKN-VVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~-~v~IaTGR~~~~l~~~~~~l 590 (803)
...+.++.-.||++...-.....+-+...++|++| ++.|+ +++++||.+....+...+.+
T Consensus 340 ~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L-~~~Gi~~v~vvTgd~~~~a~~i~~~l 400 (536)
T TIGR01512 340 AGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAEL-KALGIEKVVMLTGDRRAVAERVAREL 400 (536)
T ss_pred CCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHH-HHcCCCcEEEEcCCCHHHHHHHHHHc
Confidence 33466777778887642112456779999999998 88999 99999999999999988643
|
. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.006 Score=76.58 Aligned_cols=61 Identities=11% Similarity=0.052 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC-----CccceeEeCCHhHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSKAKYYLDDTAEI 773 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~-----~s~A~~~v~~~~ev 773 (803)
+......+++++ |++++++++|||+.+|+...+.+|. .+++|..|.. ...|.+.+++..++
T Consensus 220 ~Pe~~~~a~~~l---gv~p~e~v~IgDs~~Di~AA~~aGm-----------~~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKIL---GVPTSECVVIEDALAGVQAARAAGM-----------RCIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHc---CcCcccEEEEcCCHHHHHHHHHcCC-----------EEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 577888999999 9999999999999999999999997 3466666532 24677888988885
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.002 Score=64.92 Aligned_cols=34 Identities=12% Similarity=-0.025 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 735 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ 735 (803)
+...+..+++.+ |++++++++|||+.+|+.+.+.
T Consensus 163 ~p~~~~~~~~~~---~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 163 NPEPLILAAKAL---GVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred CHHHHHHHHHHh---CcCcccEEEEeCCHHHHHHHHh
Confidence 677788899998 9999999999999999988764
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.011 Score=67.68 Aligned_cols=36 Identities=17% Similarity=0.134 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 553 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 553 is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
+.+.+.+.|+++ ++.|.+++++||.+...++...+.
T Consensus 73 ~~pga~e~L~~l-k~~G~~v~LaTas~~~~a~~i~~~ 108 (479)
T PRK08238 73 YNEEVLDYLRAE-RAAGRKLVLATASDERLAQAVAAH 108 (479)
T ss_pred CChhHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHH
Confidence 346778888887 888888888888888888777643
|
|
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.092 Score=56.49 Aligned_cols=200 Identities=19% Similarity=0.197 Sum_probs=109.2
Q ss_pred CHHHHHHHHHhcCCeEEEEecCCcCCCCCCCCCCC--CHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC------
Q 003682 519 SIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSP--NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC------ 590 (803)
Q Consensus 519 ~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~~~~i--s~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l------ 590 (803)
+..++..--+....+|+-||=|+||.+ +...+ +..++.-|-+| -..|+.|.|+|.=.+....++.+++
T Consensus 134 N~AQi~al~~~~~L~LvTFDgDvTLY~---DG~sl~~d~pvi~~ii~L-L~~gv~VgIVTAAGY~~a~kY~~RL~GLL~a 209 (408)
T PF06437_consen 134 NTAQIMALAKNYGLKLVTFDGDVTLYE---DGASLEPDNPVIPRIIKL-LRRGVKVGIVTAAGYPGAEKYEERLHGLLDA 209 (408)
T ss_pred HHHHHHHhcccCCceEEEEcCCccccc---CCCCCCCCchHHHHHHHH-HhcCCeEEEEeCCCCCChHHHHHHHHHHHHH
Confidence 334443332333679999999999998 34433 56666667776 6779999999998887766655443
Q ss_pred -C---CCc------E---EecCcEEEEeCCc----------eeEEeecCCCCccHH--------HHHHHHHHHHhhc--C
Q 003682 591 -E---GLG------I---AAEHGYFVRPNYG----------VDWETCVSVPDFSWK--------QIAEPVMKLYTET--T 637 (803)
Q Consensus 591 -~---~l~------l---ia~nGa~i~~~~~----------~~~~~~~~~~~~~~~--------~~~~~i~~~y~~~--~ 637 (803)
. .+. + .+|.-+..+.+.. ..|.. ..-..|. +.++..+....++ .
T Consensus 210 ~~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~---~~m~~W~~~dI~~lLD~AE~~L~~~~~~l~L 286 (408)
T PF06437_consen 210 FKDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLL---PEMKTWSEEDITELLDIAEAALRDCVKRLNL 286 (408)
T ss_pred HHhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccC---ccccCcCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1 111 1 1233334443332 12321 1111232 2223333444332 2
Q ss_pred CCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcC------CCeEEEEC--CeEEEEEeCCCCHHHHHHHHHHH
Q 003682 638 DGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLAN------EPVSVKSG--PNIVEVKPQGVNKGLVAQHQLET 709 (803)
Q Consensus 638 ~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~------~~~~v~~g--~~~vEI~p~gv~Kg~al~~ll~~ 709 (803)
| ..+-.|+-++.+.- ........++.+|+.-.+...+.. .++....| +-++||= ||.-|++.+.++
T Consensus 287 p-a~IiRK~RAVGivP-~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDIG----dKs~GV~~lQ~y 360 (408)
T PF06437_consen 287 P-ATIIRKERAVGIVP-KPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDIG----DKSLGVRALQKY 360 (408)
T ss_pred C-eeEEeecceeeEec-CCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEcC----CcHHhHHHHHHH
Confidence 3 33344444443322 121223334556655444433322 34555554 3467775 499999988887
Q ss_pred hhh-CCCCcccEEEEeCC-----hhhHH
Q 003682 710 MHQ-KGMLPDFVLCIGDD-----RSDED 731 (803)
Q Consensus 710 l~~-~gi~~d~vla~GD~-----~NDi~ 731 (803)
+.. .+|.+.+++-+||- .||..
T Consensus 361 ~~~~~~i~~~~tLHVGDQF~s~GaNDfk 388 (408)
T PF06437_consen 361 FDPEGGIKPSETLHVGDQFLSAGANDFK 388 (408)
T ss_pred HHhccCCCccceeeehhhhhccCCcchh
Confidence 621 37999999999993 37754
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.018 Score=58.62 Aligned_cols=36 Identities=19% Similarity=0.201 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 700 GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 700 g~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
....+.+++++ |++++++++|||+..|+.+.+.+|.
T Consensus 155 p~~~~~~~~~~---g~~~~~~l~i~D~~~di~aA~~aG~ 190 (211)
T TIGR02247 155 PRIYQLMLERL---GVAPEECVFLDDLGSNLKPAAALGI 190 (211)
T ss_pred HHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHcCC
Confidence 56788899999 9999999999999999999999997
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0064 Score=57.76 Aligned_cols=66 Identities=21% Similarity=0.243 Sum_probs=56.4
Q ss_pred CCHHHHHHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 518 LSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 518 l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
++++.+ ++..+|-+++|+|.||++. .+...+++.++-+.++ ++.|+.++|+|--+...+..+...+
T Consensus 18 i~~~~L----~~~Gikgvi~DlDNTLv~w--d~~~~tpe~~~W~~e~-k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 18 ITPDIL----KAHGIKGVILDLDNTLVPW--DNPDATPELRAWLAEL-KEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CCHHHH----HHcCCcEEEEeccCceecc--cCCCCCHHHHHHHHHH-HhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 455444 4667999999999999996 6778899999999998 9999999999999999998888544
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.013 Score=68.85 Aligned_cols=60 Identities=13% Similarity=0.210 Sum_probs=48.1
Q ss_pred hcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 529 RTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 529 ~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
+...+.++++.||+++..-.-...+.+...++|++| ++.|+.++++||.+...++...+.
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~L-k~~Gi~v~ilSgd~~~~a~~ia~~ 441 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQAL-KRRGIEPVMLTGDNRKTAKAVAKE 441 (562)
T ss_pred hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHH
Confidence 344688999999998752112456788999999998 888999999999999999888854
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0048 Score=62.52 Aligned_cols=66 Identities=14% Similarity=0.247 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC------CccceeEeCCHhH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTAE 772 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~------~s~A~~~v~~~~e 772 (803)
|...++.+++++ |++++++++|||+.+|+.+.+.+|. .+++|.+|.. ...|.|.++++.+
T Consensus 133 ~~~~~~~~~~~~---~~~~~~~l~igD~~~Di~aA~~~Gi-----------~~i~~~~g~~~~~~l~~~~~~~~~~~~~~ 198 (205)
T TIGR01454 133 APDIVREALRLL---DVPPEDAVMVGDAVTDLASARAAGT-----------ATVAALWGEGDAGELLAARPDFLLRKPQS 198 (205)
T ss_pred ChHHHHHHHHHc---CCChhheEEEcCCHHHHHHHHHcCC-----------eEEEEEecCCChhhhhhcCCCeeeCCHHH
Confidence 678889999999 9999999999999999999999997 3478888852 3458899999999
Q ss_pred HHHHHH
Q 003682 773 ILRMLL 778 (803)
Q Consensus 773 v~~~L~ 778 (803)
+..++.
T Consensus 199 l~~~~~ 204 (205)
T TIGR01454 199 LLALCR 204 (205)
T ss_pred HHHHhh
Confidence 887654
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.00083 Score=59.80 Aligned_cols=51 Identities=25% Similarity=0.419 Sum_probs=37.9
Q ss_pred EEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 535 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 535 i~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
|+||+||||.. ...+-|.+.++|++| ++.|.+++++|-.+...-..+...+
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L-~~~g~~~~~lTNns~~s~~~~~~~L 51 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDAL-RERGKPVVFLTNNSSRSREEYAKKL 51 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHH-HHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHH-HHcCCCEEEEeCCCCCCHHHHHHHH
Confidence 68999999998 455677889999998 8889999999877755544444433
|
... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0027 Score=64.44 Aligned_cols=37 Identities=16% Similarity=0.198 Sum_probs=31.7
Q ss_pred CCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 553 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 553 is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+-+.+.++|++| ++.|+.++++||.+......+...+
T Consensus 128 ~~~~~~~~l~~L-~~~Gi~~~i~TGD~~~~a~~~~~~l 164 (215)
T PF00702_consen 128 LRPGAKEALQEL-KEAGIKVAILTGDNESTASAIAKQL 164 (215)
T ss_dssp BHTTHHHHHHHH-HHTTEEEEEEESSEHHHHHHHHHHT
T ss_pred chhhhhhhhhhh-hccCcceeeeecccccccccccccc
Confidence 456788999998 8889999999999999999888543
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0085 Score=58.11 Aligned_cols=36 Identities=14% Similarity=0.141 Sum_probs=31.1
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
.|+.+++.+.+ +.+...++++||+.||++|..-+..
T Consensus 159 gKa~~i~~lrk-----~~~~~~~~mvGDGatDlea~~pa~a 194 (227)
T KOG1615|consen 159 GKAEVIALLRK-----NYNYKTIVMVGDGATDLEAMPPADA 194 (227)
T ss_pred ccHHHHHHHHh-----CCChheeEEecCCccccccCCchhh
Confidence 69999999988 5778899999999999999877543
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.017 Score=68.36 Aligned_cols=66 Identities=15% Similarity=0.115 Sum_probs=50.6
Q ss_pred HHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 524 VSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 524 ~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
.+.+.+...+.+++-.|++++.--.-...+-++..+++++| ++.|+.++++||........+.+++
T Consensus 418 ~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l-~~~Gi~v~miTGD~~~ta~~iA~~l 483 (675)
T TIGR01497 418 VDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQL-RKMGIKTIMITGDNRLTAAAIAAEA 483 (675)
T ss_pred HHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 34445555678888788887742113445778999999998 9999999999999999999998643
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.014 Score=58.15 Aligned_cols=157 Identities=16% Similarity=0.183 Sum_probs=93.9
Q ss_pred HHHHHHHHHhcCCeEEEEecCCcCCCC-C--CCCC---------CCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHh
Q 003682 520 IDHIVSAYKRTKNRAILLDYDGTIMVP-G--SIST---------SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWF 587 (803)
Q Consensus 520 ~~~~~~~y~~~~~kli~~DlDGTLl~~-~--~~~~---------~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~ 587 (803)
.+.+.+.+++..+|+|++|+|.||++. + ..+. .++++.+..+++| ++.|+.|+|+|=-+...+
T Consensus 31 ~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l-~~~~I~v~VVTfSd~~~~---- 105 (219)
T PTZ00445 31 ADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRL-KNSNIKISVVTFSDKELI---- 105 (219)
T ss_pred HHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHH-HHCCCeEEEEEccchhhc----
Confidence 455666678889999999999999971 0 0222 2689999999998 899999999996554431
Q ss_pred hcCCCCcEEecCcEEEEeCCceeEEeecCCCCccHHHHHHHHHHHHhhcCCCceEeeccceEEEeeccCCCccchhhHHH
Q 003682 588 SSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKE 667 (803)
Q Consensus 588 ~~l~~l~lia~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~e 667 (803)
+. ..++.+|. | .+.++..++. ..-.. +.+. .+.| ..+.+ +-.+
T Consensus 106 ---~~----~~~~~~Is--g---------------~~li~~~lk~----s~~~~-~i~~---~~~y--yp~~w---~~p~ 148 (219)
T PTZ00445 106 ---PS----ENRPRYIS--G---------------DRMVEAALKK----SKCDF-KIKK---VYAY--YPKFW---QEPS 148 (219)
T ss_pred ---cc----cCCcceec--h---------------HHHHHHHHHh----cCccc-eeee---eeee--CCccc---CChh
Confidence 10 01111111 1 1122222211 11110 0000 1111 11111 1111
Q ss_pred HHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 668 LLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 668 l~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
....+ --+.|....|..=++++++.. |+.+++++.|=|+...++..+.+|.
T Consensus 149 ~y~~~-----------------gl~KPdp~iK~yHle~ll~~~---gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 149 DYRPL-----------------GLDAPMPLDKSYHLKQVCSDF---NVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred hhhhh-----------------cccCCCccchHHHHHHHHHHc---CCCHHHeEeecCCHHHHHHHHHCCC
Confidence 11111 114566667888889999999 9999999999999999999999987
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.026 Score=70.01 Aligned_cols=64 Identities=13% Similarity=0.149 Sum_probs=47.8
Q ss_pred HHHHhcCCeEEEEecCC-----cCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 525 SAYKRTKNRAILLDYDG-----TIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 525 ~~y~~~~~kli~~DlDG-----TLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
+.|.+...|++++=+++ |++.--.-..++-+.+.++|++| ++.|+.++++||.+......+..+
T Consensus 496 ~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l-~~~Gi~v~miTGD~~~tA~~ia~~ 564 (884)
T TIGR01522 496 AEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTL-ITGGVRIIMITGDSQETAVSIARR 564 (884)
T ss_pred HHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH
Confidence 34445567888877665 33321113456778999999997 999999999999999999999854
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.026 Score=68.45 Aligned_cols=65 Identities=9% Similarity=0.114 Sum_probs=50.7
Q ss_pred HHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 525 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 525 ~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+.+.....+.+++=.||+++..-.-...+-+...++|++| ++.|+.++++||.+....+.+.+.+
T Consensus 541 ~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L-~~~gi~~~llTGd~~~~a~~ia~~l 605 (741)
T PRK11033 541 NELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISEL-KALGIKGVMLTGDNPRAAAAIAGEL 605 (741)
T ss_pred HHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 3455556788888889987741112346778999999998 8899999999999999999998643
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0034 Score=64.61 Aligned_cols=64 Identities=20% Similarity=0.281 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhhhCCCCcccEEEEeCC-hhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC-------ccceeEeCCHh
Q 003682 700 GLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP-------SKAKYYLDDTA 771 (803)
Q Consensus 700 g~al~~ll~~l~~~gi~~d~vla~GD~-~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~-------s~A~~~v~~~~ 771 (803)
...-+.+++++ |+++++++.|||+ .||+.-.+.+|.. +|-+.... ..+.+.+.+..
T Consensus 157 ~~~f~~~~~~~---g~~p~~~l~VgD~~~~di~gA~~~G~~-------------~vwi~~~~~~~~~~~~~~~~~i~~l~ 220 (229)
T COG1011 157 PEIFEYALEKL---GVPPEEALFVGDSLENDILGARALGMK-------------TVWINRGGKPLPDALEAPDYEISSLA 220 (229)
T ss_pred cHHHHHHHHHc---CCCcceEEEECCChhhhhHHHHhcCcE-------------EEEECCCCCCCCCCccCCceEEcCHH
Confidence 35778888988 9999999999997 7787999999873 44333221 35667788888
Q ss_pred HHHHHHHH
Q 003682 772 EILRMLLG 779 (803)
Q Consensus 772 ev~~~L~~ 779 (803)
++.+.+..
T Consensus 221 ~l~~~~~~ 228 (229)
T COG1011 221 ELLDLLER 228 (229)
T ss_pred HHHHHHhh
Confidence 88877754
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.012 Score=49.18 Aligned_cols=59 Identities=20% Similarity=0.314 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhhhCCCCcccEEEEeCC-hhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC--------CccceeEeCCH
Q 003682 700 GLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--------PSKAKYYLDDT 770 (803)
Q Consensus 700 g~al~~ll~~l~~~gi~~d~vla~GD~-~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~--------~s~A~~~v~~~ 770 (803)
...+..+++.+ +++++++++|||+ .+|+.+.+.+|.. .+.|..|.. ...++|++++.
T Consensus 7 p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~-----------~ilV~tG~~~~~~~~~~~~~pd~vv~~l 72 (75)
T PF13242_consen 7 PGMLEQALKRL---GVDPSRCVMVGDSLETDIEAAKAAGID-----------TILVLTGVYSPEDLEKAEHKPDYVVDDL 72 (75)
T ss_dssp HHHHHHHHHHH---TSGGGGEEEEESSTTTHHHHHHHTTSE-----------EEEESSSSSCCCGHHHSSSTTSEEESSG
T ss_pred HHHHHHHHHHc---CCCHHHEEEEcCCcHhHHHHHHHcCCc-----------EEEECCCCCCHHHHhccCCCCCEEECCH
Confidence 34677888888 9999999999999 9999999999973 355666642 24688888887
Q ss_pred hH
Q 003682 771 AE 772 (803)
Q Consensus 771 ~e 772 (803)
.|
T Consensus 73 ~e 74 (75)
T PF13242_consen 73 KE 74 (75)
T ss_dssp GG
T ss_pred Hh
Confidence 65
|
... |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.082 Score=55.99 Aligned_cols=142 Identities=14% Similarity=0.143 Sum_probs=100.4
Q ss_pred CCEEEEeecCcccccCHHHHHHHHHHHHHhC---CCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCc
Q 003682 274 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQN---PSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 350 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~---p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~ 350 (803)
...++++--...|..++.-++.|+..+-++. +.---++ |.+|+ |.||..+.+.++|++ ..|
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~l-lciIT----GKGPlkE~Y~~~I~~-----------~~~ 317 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSL-LCIIT----GKGPLKEKYSQEIHE-----------KNL 317 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEc----CCCchhHHHHHHHHH-----------hcc
Confidence 3578889999999999999999998552211 1111123 33333 467888888888877 578
Q ss_pred ccEEEecCCCCHHHHHHHHHhcccce--ecccccCCCCC--ceeeeeeecCCcccccccCCCCCCCCCceEEeccccccc
Q 003682 351 QPVVLIDTPLQFYERIAYYVIAECCL--VTAVRDGMNLI--PYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS 426 (803)
Q Consensus 351 ~~v~~~~~~~~~~~l~aly~~Adv~v--~~S~~EG~~lv--~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~ 426 (803)
+.|.+.+--++-++.+.++..||..| -||. -|+-|+ +....-| +-|+++-.|.=..
T Consensus 318 ~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGc-------------------glPvcA~~fkcl~ 377 (444)
T KOG2941|consen 318 QHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGC-------------------GLPVCAVNFKCLD 377 (444)
T ss_pred cceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcC-------------------CCceeeecchhHH
Confidence 88888888899999999999999754 5553 555554 3344444 4466666776555
Q ss_pred ccC---CCCceeCCCCHHHHHHHHHHHhCC
Q 003682 427 PSL---SGAIRVNPWNIDAVAEAMDSALGV 453 (803)
Q Consensus 427 ~~l---~~~~lvnP~d~~~~a~ai~~aL~~ 453 (803)
|.+ .+|++++ |.+++|+.|..+.+.
T Consensus 378 ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~ 405 (444)
T KOG2941|consen 378 ELVKHGENGLVFE--DSEELAEQLQMLFKN 405 (444)
T ss_pred HHHhcCCCceEec--cHHHHHHHHHHHHhc
Confidence 555 4699986 799999999999873
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.034 Score=55.18 Aligned_cols=95 Identities=19% Similarity=0.283 Sum_probs=61.7
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhH-HHHHHcchhcCCCCCCCCcceEEEE--eCCCC--c
Q 003682 687 PNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDE-DMFEVIKSAAAGPSLSPVAEVFACT--VGQKP--S 761 (803)
Q Consensus 687 ~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi-~Mf~~ag~s~a~~~~~~~~~~~~v~--vG~~~--s 761 (803)
.+.....|++.-||..+.++.......|+..+.++++||+.||. +|++..+.-+||.. +.|.+. ....+ -
T Consensus 152 ~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampR-----kgfpl~k~~~~~p~~~ 226 (256)
T KOG3120|consen 152 QHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPR-----KGFPLWKLISANPMLL 226 (256)
T ss_pred CCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceeccc-----CCCchHhhhhcCccee
Confidence 35556688999999999999887767799999999999999998 45554444444422 112110 00011 1
Q ss_pred cceeEe-CCHhHHHHHHHHHHHhhcc
Q 003682 762 KAKYYL-DDTAEILRMLLGLAEASAQ 786 (803)
Q Consensus 762 ~A~~~v-~~~~ev~~~L~~l~~~~~~ 786 (803)
+|.-.. .+-.++...|..+++..+.
T Consensus 227 kasV~~W~sg~d~~~~L~~lik~~~~ 252 (256)
T KOG3120|consen 227 KASVLEWSSGEDLERILQQLIKTIQV 252 (256)
T ss_pred eeeEEecccHHHHHHHHHHHHHHhhh
Confidence 222222 5778888888888776543
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.41 Score=52.11 Aligned_cols=209 Identities=13% Similarity=0.142 Sum_probs=110.2
Q ss_pred HhHHHHHHHHHHHHHHHHhhcCCCCCeEEEeCcc--ccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHH
Q 003682 116 SLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYH--LMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRAL 193 (803)
Q Consensus 116 ~~w~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyh--l~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~l 193 (803)
..|..|++.=+. +++. +| |++..=|+- =..|...||+.+|+.||..+.- |.+|.=-|.|...+..
T Consensus 69 ~llk~~~~~~~~----i~~~-kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~-----PsVWAWr~~Ra~~i~~- 135 (381)
T COG0763 69 RLLKIRRELVRY----ILAN-KP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS-----PSVWAWRPKRAVKIAK- 135 (381)
T ss_pred HHHHHHHHHHHH----HHhc-CC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC-----cceeeechhhHHHHHH-
Confidence 456666554433 3332 56 777776763 3568889999999999998874 4555433555433333
Q ss_pred hcCCEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh-
Q 003682 194 LNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF- 272 (803)
Q Consensus 194 l~~dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~- 272 (803)
.+|++.--.+ +-..|.+. .|.. ..|=|++ =.|...+. +. .+..|+++
T Consensus 136 -~~D~lLailP-FE~~~y~k----~g~~---------~~yVGHp--------l~d~i~~~-----~~----r~~ar~~l~ 183 (381)
T COG0763 136 -YVDHLLAILP-FEPAFYDK----FGLP---------CTYVGHP--------LADEIPLL-----PD----REAAREKLG 183 (381)
T ss_pred -HhhHeeeecC-CCHHHHHh----cCCC---------eEEeCCh--------hhhhcccc-----cc----HHHHHHHhC
Confidence 2454432222 11122210 1111 1222332 12211111 01 12244444
Q ss_pred ---CCCEEEEeec-Cc-ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCC
Q 003682 273 ---KGQIVMLGVD-DM-DIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGR 347 (803)
Q Consensus 273 ---~~~~iil~V~-Rl-d~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~ 347 (803)
..+.+.+..| |- +-..-++-.++|++++.+++|+.+ ++.-..+ +.++.+..+... .
T Consensus 184 ~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~~~~---~------- 244 (381)
T COG0763 184 IDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEEALK---W------- 244 (381)
T ss_pred CCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHHHhh---c-------
Confidence 3344444443 33 335566777889999999999987 5544432 233333332211 1
Q ss_pred CCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecC
Q 003682 348 PGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 348 ~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~ 397 (803)
....+..++. ..+....+.+||+.+..| |.+.+|++.|+.|
T Consensus 245 ~~~~~~~~~~----~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P 285 (381)
T COG0763 245 EVAGLSLILI----DGEKRKAFAAADAALAAS-----GTATLEAALAGTP 285 (381)
T ss_pred cccCceEEec----CchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCC
Confidence 0000112222 346778899999999999 8899999999543
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.012 Score=53.45 Aligned_cols=56 Identities=20% Similarity=0.186 Sum_probs=42.6
Q ss_pred CCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC----ccceeEeCCHhHHHHHHHHH
Q 003682 714 GMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP----SKAKYYLDDTAEILRMLLGL 780 (803)
Q Consensus 714 gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~----s~A~~~v~~~~ev~~~L~~l 780 (803)
+-+.+.++++||+.||+.|++.+..+ ++++..++.+ ..|++++.+..++++++...
T Consensus 90 kk~~~k~vmVGnGaND~laLr~ADlG-----------I~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREADLG-----------ICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcccc-----------eEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 55678999999999999999999864 2444444444 45888888999988887654
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.028 Score=56.00 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 555 AEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 555 ~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
+.+.+.|+.+ ++.|..++|+||-+...++.+...
T Consensus 92 ~~~~e~i~~~-~~~~~~v~IvS~~~~~~i~~~~~~ 125 (192)
T PF12710_consen 92 PDAMELIREL-KDNGIKVVIVSGSPDEIIEPIAER 125 (192)
T ss_dssp TTHHHHHHHH-HHTTSEEEEEEEEEHHHHHHHHHH
T ss_pred hhHHHHHHHH-HHCCCEEEEECCCcHHHHHHHHHH
Confidence 5677888887 788999999999999888888754
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.74 Score=50.96 Aligned_cols=259 Identities=17% Similarity=0.248 Sum_probs=134.1
Q ss_pred HHHHHHHHhhcCCCCCeEEEeCcc--ccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHhcCCEEeccC
Q 003682 126 KIFADKVMEVISPDDDFVWVHDYH--LMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHT 203 (803)
Q Consensus 126 ~~fa~~i~~~~~~~~d~iwihDyh--l~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll~~dligf~~ 203 (803)
+..++.+. ..+| |+|..=||- =+.+...+|++++..||.++. +|.+|.==++|-..++.. +|.+-- .
T Consensus 72 ~~~~~~~~-~~~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~--~D~ll~-i 140 (373)
T PF02684_consen 72 RKLVERIK-EEKP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKY--VDHLLV-I 140 (373)
T ss_pred HHHHHHHH-HcCC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHH--HhheeE-C
Confidence 34444443 3467 888887884 355788999998888887766 355554346666666553 333211 1
Q ss_pred HhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHh--CCCEE--EE
Q 003682 204 FDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KGQIV--ML 279 (803)
Q Consensus 204 ~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~--~~~~i--il 279 (803)
+.+-..|.. +.| +...|=|++. +|.-. ..... ...++.+ .++++ ++
T Consensus 141 fPFE~~~y~------------~~g-~~~~~VGHPl--------~d~~~-----~~~~~----~~~~~~~l~~~~~iIaLL 190 (373)
T PF02684_consen 141 FPFEPEFYK------------KHG-VPVTYVGHPL--------LDEVK-----PEPDR----AEAREKLLDPDKPIIALL 190 (373)
T ss_pred CcccHHHHh------------ccC-CCeEEECCcc--------hhhhc-----cCCCH----HHHHHhcCCCCCcEEEEe
Confidence 112222332 111 1133334332 22111 00111 1112221 33332 33
Q ss_pred eecCcccccC-HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccEEEecC
Q 003682 280 GVDDMDIFKG-ISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDT 358 (803)
Q Consensus 280 ~V~Rld~~Kg-i~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v~~~~~ 358 (803)
-=+|-...|- ++..++|.+++.+++|+++ ++....+. . ..+.+++.....+.. .+++..
T Consensus 191 PGSR~~EI~rllP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~---~~~~i~~~~~~~~~~------~~~~~~-- 250 (373)
T PF02684_consen 191 PGSRKSEIKRLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----V---HEELIEEILAEYPPD------VSIVII-- 250 (373)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecCCH-----H---HHHHHHHHHHhhCCC------CeEEEc--
Confidence 4466665554 4888999999999999876 66544332 1 122222222221110 122222
Q ss_pred CCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCC-CCCceEEecccccccccCCCC-----
Q 003682 359 PLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPST-AKSSMLVVSEFVGCSPSLSGA----- 432 (803)
Q Consensus 359 ~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~-~~~g~vV~S~~~G~~~~l~~~----- 432 (803)
..+...+++.||+.+++| |.+.+|++..+.|.- ..-..++.+ -=+..+|-..+.|....+-+.
T Consensus 251 ---~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~V---v~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PE 319 (373)
T PF02684_consen 251 ---EGESYDAMAAADAALAAS-----GTATLEAALLGVPMV---VAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPE 319 (373)
T ss_pred ---CCchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEE---EEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchh
Confidence 235778899999999999 789999988855410 000000000 000112234555555555331
Q ss_pred ceeCCCCHHHHHHHHHHHhCCCHH
Q 003682 433 IRVNPWNIDAVAEAMDSALGVSDA 456 (803)
Q Consensus 433 ~lvnP~d~~~~a~ai~~aL~~~~~ 456 (803)
++-+-.+++.+++++...|..+..
T Consensus 320 liQ~~~~~~~i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 320 LIQEDATPENIAAELLELLENPEK 343 (373)
T ss_pred hhcccCCHHHHHHHHHHHhcCHHH
Confidence 444556889999999999986544
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.017 Score=59.66 Aligned_cols=61 Identities=16% Similarity=0.312 Sum_probs=42.5
Q ss_pred CCHHHHHHHHHhcCCeEEEEecCCcCCCCCCC-------------------------------CCCCCHHHHHHHHHHhc
Q 003682 518 LSIDHIVSAYKRTKNRAILLDYDGTIMVPGSI-------------------------------STSPNAEAVAILDNLCR 566 (803)
Q Consensus 518 l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~-------------------------------~~~is~~~~~aL~~L~~ 566 (803)
.+++++.++-...+.-.|+||+|||+++.++. ...+-+.+++.|+.| +
T Consensus 49 ~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L-~ 127 (237)
T PRK11009 49 VSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMH-V 127 (237)
T ss_pred EEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHH-H
Confidence 56778877765555559999999999973220 001223477778887 7
Q ss_pred CCCCeEEEEcCCC
Q 003682 567 DPKNVVFLVSGKD 579 (803)
Q Consensus 567 ~~g~~v~IaTGR~ 579 (803)
++|+.++++|||+
T Consensus 128 ~~G~~I~iVTnR~ 140 (237)
T PRK11009 128 KRGDSIYFITGRT 140 (237)
T ss_pred HCCCeEEEEeCCC
Confidence 7788888888886
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.023 Score=58.12 Aligned_cols=51 Identities=18% Similarity=0.242 Sum_probs=41.3
Q ss_pred CCeEEEEecCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhh
Q 003682 531 KNRAILLDYDGTIMVPGS-----------------------ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDT 582 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~-----------------------~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~ 582 (803)
.+-.++||+|.|+++..+ .....-+.++++++.+ ++.|+.|+++|||+...
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l-~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKI-IELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHH-HHCCCEEEEEcCCChHH
Confidence 457899999999997321 1234568899999998 89999999999999766
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.012 Score=60.54 Aligned_cols=50 Identities=12% Similarity=0.166 Sum_probs=39.4
Q ss_pred EEEECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 682 SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 682 ~v~~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
.++.+.....-+| ....-...+++| |..|++|++|.|+.+.+...+.+|.
T Consensus 131 ~~v~~~dv~~~KP----~Pd~yL~Aa~~L---gv~P~~CvviEDs~~Gi~Aa~aAGm 180 (221)
T COG0637 131 VIVTADDVARGKP----APDIYLLAAERL---GVDPEECVVVEDSPAGIQAAKAAGM 180 (221)
T ss_pred hhccHHHHhcCCC----CCHHHHHHHHHc---CCChHHeEEEecchhHHHHHHHCCC
Confidence 3444555555566 456667777888 9999999999999999999999997
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.063 Score=66.88 Aligned_cols=40 Identities=15% Similarity=0.308 Sum_probs=34.7
Q ss_pred CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 550 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 550 ~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
..++-+.+.++|+++ ++.|++++++||.+......+.+.+
T Consensus 535 ~Dplr~~v~e~I~~l-~~aGI~v~miTGD~~~tA~~ia~~~ 574 (917)
T TIGR01116 535 LDPPRPEVADAIEKC-RTAGIRVIMITGDNKETAEAICRRI 574 (917)
T ss_pred eCCCchhHHHHHHHH-HHCCCEEEEecCCCHHHHHHHHHHc
Confidence 345778999999997 9999999999999999999888543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.11 Score=59.56 Aligned_cols=64 Identities=23% Similarity=0.356 Sum_probs=44.7
Q ss_pred CCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCC----CCccceeEeCCHh
Q 003682 696 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ----KPSKAKYYLDDTA 771 (803)
Q Consensus 696 gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~----~~s~A~~~v~~~~ 771 (803)
..-|+..++.+-++- | ..+.||||+.||.+|++.|+.+ +++ +|+ +.-+|+|-+....
T Consensus 766 PtQKA~v~~llq~~t---~---krvc~IGDGGNDVsMIq~A~~G------------iGI-~gkEGkQASLAADfSItqF~ 826 (1051)
T KOG0210|consen 766 PTQKAQVVRLLQKKT---G---KRVCAIGDGGNDVSMIQAADVG------------IGI-VGKEGKQASLAADFSITQFS 826 (1051)
T ss_pred hhHHHHHHHHHHHhh---C---ceEEEEcCCCccchheeecccc------------eee-ecccccccchhccccHHHHH
Confidence 345888888777765 3 6799999999999999999764 333 343 2356777666555
Q ss_pred HHHHHHH
Q 003682 772 EILRMLL 778 (803)
Q Consensus 772 ev~~~L~ 778 (803)
-|.++|-
T Consensus 827 Hv~rLLl 833 (1051)
T KOG0210|consen 827 HVSRLLL 833 (1051)
T ss_pred HHHHHhh
Confidence 5555553
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.066 Score=67.29 Aligned_cols=38 Identities=18% Similarity=0.188 Sum_probs=34.1
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
.++-+++.++|+++ ++.|+.|+++|||+...+..+.++
T Consensus 567 Dplr~~v~~aI~~l-~~~Gi~v~~~TGd~~~ta~~ia~~ 604 (997)
T TIGR01106 567 DPPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIAKG 604 (997)
T ss_pred CCChHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH
Confidence 45678999999997 999999999999999999999854
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.092 Score=62.48 Aligned_cols=65 Identities=11% Similarity=0.093 Sum_probs=49.5
Q ss_pred HHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 525 SAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 525 ~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+.+.+...+.+++-.|++++.--.-...+-+++.+++++| ++.|+.++++||-+....+.+..++
T Consensus 418 ~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~L-r~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 418 DEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAEL-RKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 3444455677777778887741112345778999999997 9999999999999999999998643
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.026 Score=58.89 Aligned_cols=54 Identities=24% Similarity=0.319 Sum_probs=42.6
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHH--HHhhc
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA--EWFSS 589 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~--~~~~~ 589 (803)
++++++||+||||.. ...+.+.+.++|++| ++.|.+++++|..+..... +.+..
T Consensus 7 ~~~~~~~D~dG~l~~----~~~~~pga~e~L~~L-~~~G~~~~ivTN~~~~~~~~~~~L~~ 62 (242)
T TIGR01459 7 DYDVFLLDLWGVIID----GNHTYPGAVQNLNKI-IAQGKPVYFVSNSPRNIFSLHKTLKS 62 (242)
T ss_pred cCCEEEEeccccccc----CCccCccHHHHHHHH-HHCCCEEEEEeCCCCChHHHHHHHHH
Confidence 468999999999997 345679999999999 8889999999886665433 44443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.15 Score=63.95 Aligned_cols=137 Identities=16% Similarity=0.222 Sum_probs=85.5
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCcEEEEeCCceeEEeecCCCCccHHHHHHHHH
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVM 630 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~i~ 630 (803)
..+-+++.+++++| ++.|++++++||.+......+.++ +++...++..+. |. + .
T Consensus 578 Dplr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~iA~~---~GI~~~~~~vi~--G~------------~----~---- 631 (941)
T TIGR01517 578 DPLRPGVREAVQEC-QRAGITVRMVTGDNIDTAKAIARN---CGILTFGGLAME--GK------------E----F---- 631 (941)
T ss_pred CCCchhHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHH---cCCCCCCceEee--HH------------H----h----
Confidence 45778999999997 999999999999999999999854 445433221100 00 0 0
Q ss_pred HHHhhcCCCceEeeccceEEEeeccCCCccchhhHHHHHHHHHHHhcCCCeEEEECCeEEEEEeCCCCHHHHHHHHHHHh
Q 003682 631 KLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETM 710 (803)
Q Consensus 631 ~~y~~~~~g~~ie~k~~~~~~~~~~~d~~~~~~~~~el~~~l~~~l~~~~~~v~~g~~~vEI~p~gv~Kg~al~~ll~~l 710 (803)
+ ... . +++.+.+.+. .-+-.+.| -+|...++.+.+.
T Consensus 632 ~-----------------------~l~-------~----~el~~~i~~~-------~Vfar~sP--e~K~~iV~~lq~~- 667 (941)
T TIGR01517 632 R-----------------------RLV-------Y----EEMDPILPKL-------RVLARSSP--LDKQLLVLMLKDM- 667 (941)
T ss_pred h-----------------------hCC-------H----HHHHHHhccC-------eEEEECCH--HHHHHHHHHHHHC-
Confidence 0 000 0 1112222221 12334555 3588888887553
Q ss_pred hhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeC-C----CCccceeEeC--CHhHHHHHH
Q 003682 711 HQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG-Q----KPSKAKYYLD--DTAEILRML 777 (803)
Q Consensus 711 ~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG-~----~~s~A~~~v~--~~~ev~~~L 777 (803)
| .-|.++||+.||.+|++.|.. ++++| . ++..|++++- +...+.+.+
T Consensus 668 ---g---~vVam~GDGvNDapALk~AdV--------------GIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 668 ---G---EVVAVTGDGTNDAPALKLADV--------------GFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred ---C---CEEEEECCCCchHHHHHhCCc--------------ceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 3 369999999999999999986 45555 2 2456778763 555555554
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.028 Score=54.61 Aligned_cols=48 Identities=23% Similarity=0.401 Sum_probs=37.1
Q ss_pred ccccCCCHHHHHHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHH
Q 003682 513 PNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNL 564 (803)
Q Consensus 513 ~~~~~l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L 564 (803)
+.+..++.+.- ..++..+|.++||.|+||+.. ....++++..+.++++
T Consensus 24 ~si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l 71 (168)
T PF09419_consen 24 PSIRDIDFEAN--HLKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNEL 71 (168)
T ss_pred CChhhCCcchh--hhhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHH
Confidence 34556666540 135678999999999999974 6778999999999997
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.099 Score=62.14 Aligned_cols=69 Identities=14% Similarity=0.132 Sum_probs=49.0
Q ss_pred HHHHHHHHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 521 DHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 521 ~~~~~~y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+...+.+.+...+.++.-.|++++.--.-...+-++..+++++| ++.|+.++++||-+......+.+++
T Consensus 410 ~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~L-r~~GI~vvMiTGDn~~TA~aIA~el 478 (673)
T PRK14010 410 DALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFREL-REMGIETVMCTGDNELTAATIAKEA 478 (673)
T ss_pred HHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 33334454444566555457776641112345778999999997 9999999999999999999998643
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.087 Score=55.04 Aligned_cols=91 Identities=22% Similarity=0.454 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHhh-cCCCCCeEEEeCccccchHHHHHhhCC------CCeEEEEEec-CC----CChhhhhc--CC
Q 003682 119 QAYVSVNKIFADKVMEV-ISPDDDFVWVHDYHLMVLPTFLRKRFN------RVKLGFFLHS-PF----PSSEIYRT--LP 184 (803)
Q Consensus 119 ~~Y~~vN~~fa~~i~~~-~~~~~d~iwihDyhl~llp~~lr~~~~------~~~i~~flH~-pf----P~~~~~~~--lp 184 (803)
.-|.-.++.-++.+... .+| |+|++||+|-.++|.+|+.... ++|+.+++|- -| |. +.+.. +|
T Consensus 114 ~rf~~fs~a~le~~~~l~~~p--DIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~ 190 (245)
T PF08323_consen 114 ERFAFFSRAALELLKKLGWKP--DIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLP 190 (245)
T ss_dssp HHHHHHHHHHHHHHCTCT-S---SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-G
T ss_pred HHHHHHHHHHHHHHHhhCCCC--CEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCC
Confidence 34554555555554442 345 9999999999999999998753 6999999994 22 22 11111 23
Q ss_pred C--------------cHHHHHHHhcCCEEeccCHhhHHHHHH
Q 003682 185 I--------------RDELLRALLNADLIGFHTFDYARHFLS 212 (803)
Q Consensus 185 ~--------------~~~il~~ll~~dligf~~~~~~~~Fl~ 212 (803)
+ -.-+-.|+..||.|-.-++.|++.-++
T Consensus 191 ~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 191 DEYFQNLDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp GGGS-STTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred HHHhccccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 1 124556899999999999999876544
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.19 Score=63.60 Aligned_cols=46 Identities=11% Similarity=0.198 Sum_probs=37.8
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCc
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 600 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nG 600 (803)
..+.+++.++|++| ++.|++++++||.+......+.+ .++++..++
T Consensus 655 d~lr~~~~~~I~~l-~~agi~v~miTGD~~~TA~~iA~---~~gii~~~~ 700 (1054)
T TIGR01657 655 NPLKPDTKEVIKEL-KRASIRTVMITGDNPLTAVHVAR---ECGIVNPSN 700 (1054)
T ss_pred cCCCccHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCCCCCc
Confidence 35778999999997 99999999999999999999885 455554443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.018 Score=58.01 Aligned_cols=42 Identities=17% Similarity=0.127 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 695 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 695 ~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
.+-.|..+++.+++.. ++++++++++|||.+|++|++.+|..
T Consensus 152 ~g~~K~~~l~~~~~~~---~~~~~~~~~~gDs~~D~~~~~~a~~~ 193 (202)
T TIGR01490 152 KGEGKVHALAELLAEE---QIDLKDSYAYGDSISDLPLLSLVGHP 193 (202)
T ss_pred CChHHHHHHHHHHHHc---CCCHHHcEeeeCCcccHHHHHhCCCc
Confidence 4567999999999988 99999999999999999999999975
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.039 Score=52.78 Aligned_cols=55 Identities=15% Similarity=0.295 Sum_probs=40.6
Q ss_pred EEEEecCCcCCCCC------C--CCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhh---HHHHhhc
Q 003682 534 AILLDYDGTIMVPG------S--ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDT---LAEWFSS 589 (803)
Q Consensus 534 li~~DlDGTLl~~~------~--~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~---l~~~~~~ 589 (803)
++++|+||||+.+. + ......+.+.+..+++ +++|..++-+|+|+... .+.|+..
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i-~~~GY~ilYlTaRp~~qa~~Tr~~L~~ 66 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKI-ADNGYKILYLTARPIGQANRTRSWLAQ 66 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHH-HHCCeEEEEECcCcHHHHHHHHHHHHH
Confidence 48999999999832 0 0113457788889998 89999999999999754 3455543
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.042 Score=55.48 Aligned_cols=54 Identities=15% Similarity=0.161 Sum_probs=39.7
Q ss_pred CCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC----Ccccee-EeCCHhHHHHHHHHHHH
Q 003682 715 MLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKY-YLDDTAEILRMLLGLAE 782 (803)
Q Consensus 715 i~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~----~s~A~~-~v~~~~ev~~~L~~l~~ 782 (803)
..++++++|||+.||++|.+.+|.+ |.++.. ...+.+ .+++..++.+.|.+...
T Consensus 142 ~~~~~~v~iGDs~~D~~~~~aa~~~--------------v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 142 SLGYRVIAAGDSYNDTTMLGEADAG--------------ILFRPPANVIAEFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred HhCCeEEEEeCCHHHHHHHHhCCCC--------------EEECCCHHHHHhCCcccccCCHHHHHHHHHHHHh
Confidence 3457899999999999999999853 334432 123454 68899999888877654
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.015 Score=56.48 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=30.9
Q ss_pred eEEEEecCCcCCCCCCCC--------C-CCCHHHHHHHHHHhcCCCCeEEEEcC
Q 003682 533 RAILLDYDGTIMVPGSIS--------T-SPNAEAVAILDNLCRDPKNVVFLVSG 577 (803)
Q Consensus 533 kli~~DlDGTLl~~~~~~--------~-~is~~~~~aL~~L~~~~g~~v~IaTG 577 (803)
|+.+||+||||+...+.. - -..+.+.++|++| .+.|..++|+|-
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l-~~~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALREL-HKKGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHH-HHTTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHH-HhcCCeEEEEeC
Confidence 689999999999743211 1 1345799999998 888898888874
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.13 Score=65.12 Aligned_cols=45 Identities=11% Similarity=0.141 Sum_probs=34.9
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecC
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEH 599 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~n 599 (803)
.++-+.+.++|+.| ++.|++++++||-.......+... .+++..+
T Consensus 630 D~lq~~v~etI~~L-~~AGIkv~mlTGD~~~TA~~IA~~---~~ii~~~ 674 (1057)
T TIGR01652 630 DKLQEGVPETIELL-RQAGIKIWVLTGDKVETAINIGYS---CRLLSRN 674 (1057)
T ss_pred hhhhhccHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHHH---hCCCCCC
Confidence 34567788888887 888999999999999999888743 4444433
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.0073 Score=58.59 Aligned_cols=98 Identities=15% Similarity=0.277 Sum_probs=47.1
Q ss_pred HHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCc-----HHHHHH-HhcCCEEeccCH
Q 003682 131 KVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIR-----DELLRA-LLNADLIGFHTF 204 (803)
Q Consensus 131 ~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~-----~~il~~-ll~~dligf~~~ 204 (803)
++++..+| |+|++|.++...+..+... +.|+.+++|.+++........... ..+.+. .-.+|.+-.-+.
T Consensus 74 ~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~ 148 (177)
T PF13439_consen 74 RLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSE 148 (177)
T ss_dssp HHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSH
T ss_pred HHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEECH
Confidence 34455576 9999999987766554433 788999999887531111111111 111111 234676655554
Q ss_pred hhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHH
Q 003682 205 DYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQ 253 (803)
Q Consensus 205 ~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~ 253 (803)
...+.+.+ .|+. ..++.++|+|||.+.|+
T Consensus 149 ~~~~~l~~-----~~~~---------------~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 149 STKDELIK-----FGIP---------------PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHHH-----hCCc---------------ccCCEEEECCccHHHcC
Confidence 44433332 2211 13678899999999884
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.23 Score=55.80 Aligned_cols=138 Identities=14% Similarity=0.134 Sum_probs=79.0
Q ss_pred EEEEeecC-cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhc---------cc
Q 003682 276 IVMLGVDD-MDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINK---------IF 345 (803)
Q Consensus 276 ~iil~V~R-ld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~---------~~ 345 (803)
.+++.-+| =+-.++++.+++|++++.++ |+ +.++....+. .+++.+++.+.+. .++. .|
T Consensus 208 lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~----~~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 208 IALLPGSRPPEAYRNLKLLLRALEALPDS-QP----FVFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLF 276 (396)
T ss_pred EEEECCCCHHHHHccHHHHHHHHHHHhhC-CC----eEEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhh
Confidence 45666677 44567888999999988655 44 3355444332 2333444433221 0000 00
Q ss_pred CCCCcccEEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccc
Q 003682 346 GRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC 425 (803)
Q Consensus 346 ~~~~~~~v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~ 425 (803)
.. ..+.++. ...++..+|+.||++|..| |.+..|+++++. |.|+--+.+-
T Consensus 277 ~~---~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~-------------------P~Ilip~~~~ 326 (396)
T TIGR03492 277 QK---GTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGK-------------------PVIQLPGKGP 326 (396)
T ss_pred cc---CceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCC-------------------CEEEEeCCCC
Confidence 00 0122222 2457899999999999886 345589999844 4555432111
Q ss_pred ------ccc---C-CCCceeCCCCHHHHHHHHHHHhCCC
Q 003682 426 ------SPS---L-SGAIRVNPWNIDAVAEAMDSALGVS 454 (803)
Q Consensus 426 ------~~~---l-~~~~lvnP~d~~~~a~ai~~aL~~~ 454 (803)
.+. + .+++.+...+.+.+++++.++++.+
T Consensus 327 q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 327 QFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred HHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCH
Confidence 111 1 3455555677899999999998743
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.25 Score=62.73 Aligned_cols=38 Identities=13% Similarity=0.184 Sum_probs=33.0
Q ss_pred CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhh
Q 003682 550 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 588 (803)
Q Consensus 550 ~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~ 588 (803)
..++-+.+.+++++| ++.|+.++++||-.......+..
T Consensus 724 ~D~lr~~v~~~I~~l-~~agi~v~mlTGD~~~tAi~IA~ 761 (1178)
T PLN03190 724 EDKLQQGVPEAIESL-RTAGIKVWVLTGDKQETAISIGY 761 (1178)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHH
Confidence 345778899999998 89999999999999998888874
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.045 Score=57.54 Aligned_cols=54 Identities=28% Similarity=0.369 Sum_probs=40.7
Q ss_pred cCCeEEEEecCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHH
Q 003682 530 TKNRAILLDYDGTIMVPGS-----------------------ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLA 584 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~-----------------------~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~ 584 (803)
.+...|+||+|+|+++..+ ....+-+.+.+.|+.| .+.|..++++|+|+.....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L-~~~G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYA-NSKGVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCeEEEEeCCCcchHH
Confidence 3457999999999997431 0123447788999998 8889999999999965444
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.063 Score=55.90 Aligned_cols=55 Identities=18% Similarity=0.177 Sum_probs=40.7
Q ss_pred CeEEEEecCCcCCCCCC-----------------C-------CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHh
Q 003682 532 NRAILLDYDGTIMVPGS-----------------I-------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWF 587 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~-----------------~-------~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~ 587 (803)
.-.++||+|+|+++..+ . ....-+.+++..+.+ ++.|+.|+++|||+...-..-.
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l-~~~G~kIf~VSgR~e~~r~aT~ 179 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKL-VSLGFKIIFLSGRLKDKQAVTE 179 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHH-HHCCCEEEEEeCCchhHHHHHH
Confidence 46999999999995210 1 223457888999997 8999999999999965433333
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.51 Score=57.62 Aligned_cols=64 Identities=14% Similarity=0.118 Sum_probs=46.0
Q ss_pred HHHhcCCeEEEEec---CC--cCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 526 AYKRTKNRAILLDY---DG--TIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 526 ~y~~~~~kli~~Dl---DG--TLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
.+.....|.+++=+ ++ +++.--.-..++-+++.+++++| ++.|+.++++||.+......+.+++
T Consensus 411 ~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~l 479 (755)
T TIGR01647 411 ELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERA-RHLGVEVKMVTGDHLAIAKETARRL 479 (755)
T ss_pred HHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 33444567777655 33 44321113456778999999997 9999999999999999999998643
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=94.11 E-value=2.1 Score=47.49 Aligned_cols=73 Identities=10% Similarity=-0.003 Sum_probs=49.5
Q ss_pred EEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC-C
Q 003682 353 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-G 431 (803)
Q Consensus 353 v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~-~ 431 (803)
.+.+.+.++..++.++++.|++++-.|. =|+ .||.+.+. |+|. ...=.+.+. +
T Consensus 263 ~v~l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg~-------------------Pvv~--l~~R~e~~~~g 316 (365)
T TIGR03568 263 NFRLFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFGV-------------------PTIN--IGTRQKGRLRA 316 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcCC-------------------CEEe--ecCCchhhhhc
Confidence 4567778999999999999999885442 122 79999843 3442 222233332 2
Q ss_pred -C-ceeCCCCHHHHHHHHHHHhC
Q 003682 432 -A-IRVNPWNIDAVAEAMDSALG 452 (803)
Q Consensus 432 -~-~lvnP~d~~~~a~ai~~aL~ 452 (803)
. ++| +.|++++.+++.+++.
T Consensus 317 ~nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 317 DSVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred CeEEEe-CCCHHHHHHHHHHHhC
Confidence 2 447 6789999999999654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.42 Score=59.33 Aligned_cols=39 Identities=15% Similarity=0.222 Sum_probs=34.4
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
.++-+++.+++++| ++.|+.++++||-+......+.+++
T Consensus 549 Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~l 587 (902)
T PRK10517 549 DPPKETTAPALKAL-KASGVTVKILTGDSELVAAKVCHEV 587 (902)
T ss_pred CcchhhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 45678999999997 9999999999999999999998643
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.24 Score=62.38 Aligned_cols=38 Identities=13% Similarity=0.204 Sum_probs=33.8
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
..+-+.+.++++++ ++.|++|+++||........+.++
T Consensus 645 Dp~r~~v~~aI~~l-~~aGIkv~MiTGD~~~tA~~iA~~ 682 (1053)
T TIGR01523 645 DPPRNESAGAVEKC-HQAGINVHMLTGDFPETAKAIAQE 682 (1053)
T ss_pred cCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHH
Confidence 35678999999997 999999999999999999999854
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.86 Score=47.73 Aligned_cols=59 Identities=15% Similarity=0.189 Sum_probs=43.0
Q ss_pred EEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC
Q 003682 692 VKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP 760 (803)
Q Consensus 692 I~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~ 760 (803)
++-.|.+||.++..+++++ |..|+.|+++-|+...+.-++.+=.. .+..++++.+....
T Consensus 156 lft~~~~KG~~L~~fL~~~---~~~pk~IIfIDD~~~nl~sv~~a~k~-------~~I~f~G~~Yt~~~ 214 (252)
T PF11019_consen 156 LFTGGQDKGEVLKYFLDKI---NQSPKKIIFIDDNKENLKSVEKACKK-------SGIDFIGFHYTGAE 214 (252)
T ss_pred EEeCCCccHHHHHHHHHHc---CCCCCeEEEEeCCHHHHHHHHHHHhh-------CCCcEEEEEEcchh
Confidence 3456789999999999999 99999999999997666544433211 12356788887643
|
The function is not known. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.64 Score=57.65 Aligned_cols=39 Identities=13% Similarity=0.122 Sum_probs=34.3
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
..+-+++.++++++ ++.|+.++++||-+......+.+++
T Consensus 514 Dp~R~~~~~aI~~l-~~aGI~vvmiTGD~~~tA~aIA~~l 552 (867)
T TIGR01524 514 DPPKESTKEAIAAL-FKNGINVKVLTGDNEIVTARICQEV 552 (867)
T ss_pred CCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc
Confidence 45678999999997 9999999999999999999988643
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.34 Score=56.29 Aligned_cols=63 Identities=13% Similarity=0.140 Sum_probs=46.0
Q ss_pred HHhcCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 527 YKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 527 y~~~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+.....+.+++=+|++++..-.-...+-+.+.++++.| ++.|+.++++||..........+.+
T Consensus 322 ~~~~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l-~~~gi~~~~ltGD~~~~a~~ia~~l 384 (499)
T TIGR01494 322 LAQSGLRVLAVASKETLLGLLGLEDPLRDDAKETISEL-REAGIRVIMLTGDNVLTAKAIAKEL 384 (499)
T ss_pred HHhCCCEEEEEEECCeEEEEEEecCCCchhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 44445576666678776641112445678888888888 7789999999999999998888643
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.44 Score=59.38 Aligned_cols=40 Identities=18% Similarity=0.435 Sum_probs=34.8
Q ss_pred CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 550 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 550 ~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
..+|-+++.++++.+ ++.|++++.+||-.......+.+++
T Consensus 545 ~Dppr~~v~~aI~~l-~~AGI~v~MiTGD~~~TA~aIa~~~ 584 (917)
T COG0474 545 EDPPREDVKEAIEEL-REAGIKVWMITGDHVETAIAIAKEC 584 (917)
T ss_pred cCCCCccHHHHHHHH-HHCCCcEEEECCCCHHHHHHHHHHc
Confidence 445778999999996 9999999999999999999988654
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.73 Score=57.33 Aligned_cols=39 Identities=18% Similarity=0.258 Sum_probs=34.5
Q ss_pred CCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 551 ~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
..+-+++.++++++ ++.|+.++++||-+......+.+++
T Consensus 549 Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~aIA~~l 587 (903)
T PRK15122 549 DPPKESAAPAIAAL-RENGVAVKVLTGDNPIVTAKICREV 587 (903)
T ss_pred CccHHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 45678999999997 9999999999999999999998643
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.045 Score=55.90 Aligned_cols=70 Identities=14% Similarity=0.086 Sum_probs=45.9
Q ss_pred CCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCCccceeEeCCHhHHHHH
Q 003682 697 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRM 776 (803)
Q Consensus 697 v~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~s~A~~~v~~~~ev~~~ 776 (803)
..|..+++.+ +..++.+++|||+.||++|++.++..++...+.. .-.....+....++..+|.+.
T Consensus 143 ~~K~~~l~~~-------~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~--------~~~~~~~~~~~~~~f~di~~~ 207 (214)
T TIGR03333 143 CCKPSLIRKL-------SEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLN--------ECEELGLNHAPFQDFYDVRKE 207 (214)
T ss_pred CCHHHHHHHH-------hhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHH--------HHHHcCCCccCcCCHHHHHHH
Confidence 4588887765 3356789999999999999999987544221000 001122233446888999988
Q ss_pred HHHHH
Q 003682 777 LLGLA 781 (803)
Q Consensus 777 L~~l~ 781 (803)
|+++-
T Consensus 208 l~~~~ 212 (214)
T TIGR03333 208 LENVK 212 (214)
T ss_pred HHHHh
Confidence 87654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=93.19 E-value=13 Score=40.90 Aligned_cols=137 Identities=15% Similarity=0.137 Sum_probs=84.8
Q ss_pred CEEEEeecCcccc-cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003682 275 QIVMLGVDDMDIF-KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 353 (803)
Q Consensus 275 ~~iil~V~Rld~~-Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v 353 (803)
+.+++..-|-+-. +++...+.|+.++++++|+.. ++.-..+ + +-.++.. +.+++ -.+.
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----viyp~H~-~---~~v~e~~----------~~~L~---~~~~ 263 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VIYPVHP-R---PRVRELV----------LKRLK---NVER 263 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EEEeCCC-C---hhhhHHH----------HHHhC---CCCc
Confidence 4677777777766 999999999999999998764 4322222 1 2222222 11111 1223
Q ss_pred EEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccCC-C-
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS-G- 431 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~-~- 431 (803)
+.+..++...+...|+..|-+.+--| |-.--||-.-+.| ++++=+.+.=++.+. |
T Consensus 264 v~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~P------------------vl~lR~~TERPE~v~agt 320 (383)
T COG0381 264 VKLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGKP------------------VLVLRDTTERPEGVEAGT 320 (383)
T ss_pred EEEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCCc------------------EEeeccCCCCccceecCc
Confidence 44555799999999999996655444 1123355554221 345555555555553 3
Q ss_pred CceeCCCCHHHHHHHHHHHhCCCHH
Q 003682 432 AIRVNPWNIDAVAEAMDSALGVSDA 456 (803)
Q Consensus 432 ~~lvnP~d~~~~a~ai~~aL~~~~~ 456 (803)
.++|+ .|.+.+.+++.++++++..
T Consensus 321 ~~lvg-~~~~~i~~~~~~ll~~~~~ 344 (383)
T COG0381 321 NILVG-TDEENILDAATELLEDEEF 344 (383)
T ss_pred eEEeC-ccHHHHHHHHHHHhhChHH
Confidence 35665 4789999999999986544
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=92.93 E-value=0.16 Score=58.50 Aligned_cols=49 Identities=18% Similarity=0.162 Sum_probs=38.4
Q ss_pred CCeEEEEecCCcCCCCCCCC---------CCCCHHHHHHHHHHhcCCCCeEEEEcCCCh
Q 003682 531 KNRAILLDYDGTIMVPGSIS---------TSPNAEAVAILDNLCRDPKNVVFLVSGKDR 580 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~---------~~is~~~~~aL~~L~~~~g~~v~IaTGR~~ 580 (803)
..|+++||+||||+...+.. ..+.+.+.++|++| .+.|+.++|+|..+.
T Consensus 167 ~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L-~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 167 QEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKEL-EADGFKICIFTNQGG 224 (526)
T ss_pred cCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHH-HHCCCEEEEEECCcc
Confidence 46999999999999742110 12457889999999 899999999998665
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.93 E-value=0.2 Score=47.92 Aligned_cols=57 Identities=11% Similarity=0.070 Sum_probs=42.9
Q ss_pred CeEEEEecCCcCCCCCC-C-C----C-----------------CCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhh
Q 003682 532 NRAILLDYDGTIMVPGS-I-S----T-----------------SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 588 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~-~-~----~-----------------~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~ 588 (803)
++++++|+||||+.... + . . .+-+.+.+.|+.| + .++.++|+|+.+...++..+.
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L-~-~~~~l~I~Ts~~~~~~~~il~ 79 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRA-S-ELFELVVFTAGLRMYADPVLD 79 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHH-H-hccEEEEEeCCcHHHHHHHHH
Confidence 57899999999998521 0 0 0 1246788899998 5 479999999999998888775
Q ss_pred cC
Q 003682 589 SC 590 (803)
Q Consensus 589 ~l 590 (803)
.+
T Consensus 80 ~l 81 (148)
T smart00577 80 LL 81 (148)
T ss_pred Hh
Confidence 43
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=92.91 E-value=0.013 Score=60.38 Aligned_cols=60 Identities=17% Similarity=0.234 Sum_probs=42.8
Q ss_pred cCCeEEEEecCCcCCCCCC-----------------------CCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHH
Q 003682 530 TKNRAILLDYDGTIMVPGS-----------------------ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEW 586 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~-----------------------~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~ 586 (803)
.....|+||+|+|+++..+ .....-+.+++.++.+ .+.|..|+++|||+...-..-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~-~~~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYA-RSRGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHH-HHTTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHH-HHCCCeEEEEecCCchhHHHH
Confidence 3467999999999986210 0112335678888887 889999999999998854444
Q ss_pred hhcC
Q 003682 587 FSSC 590 (803)
Q Consensus 587 ~~~l 590 (803)
...+
T Consensus 149 ~~nL 152 (229)
T PF03767_consen 149 EKNL 152 (229)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4333
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.53 Score=58.57 Aligned_cols=45 Identities=20% Similarity=0.316 Sum_probs=33.9
Q ss_pred EEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 689 IVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 689 ~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
.+-.+..-.-|+..++.+.+.. ...++||||+.||..|++.|+.+
T Consensus 772 ViCCR~sPlQKA~Vv~lVk~~~------~~~TLAIGDGANDVsMIQ~AhVG 816 (1151)
T KOG0206|consen 772 VICCRVSPLQKALVVKLVKKGL------KAVTLAIGDGANDVSMIQEAHVG 816 (1151)
T ss_pred EEEccCCHHHHHHHHHHHHhcC------CceEEEeeCCCccchheeeCCcC
Confidence 3444444456999999885433 56799999999999999988753
|
|
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.17 Score=50.41 Aligned_cols=70 Identities=16% Similarity=0.138 Sum_probs=53.3
Q ss_pred HHHHHHHHHHhhhCCCC-cccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCC--CCccceeEeCCHhHHHHH
Q 003682 700 GLVAQHQLETMHQKGML-PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ--KPSKAKYYLDDTAEILRM 776 (803)
Q Consensus 700 g~al~~ll~~l~~~gi~-~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~--~~s~A~~~v~~~~ev~~~ 776 (803)
..|.+..++.. |+. +.++++|-||.+.+.-.+.+|. -+|-+|. ....+.|.+.+..+..+.
T Consensus 163 ~~afE~a~k~a---gi~~p~~t~FfDDS~~NI~~ak~vGl-------------~tvlv~~~~~~~~~d~~l~~ih~~k~a 226 (244)
T KOG3109|consen 163 EEAFEKAMKVA---GIDSPRNTYFFDDSERNIQTAKEVGL-------------KTVLVGREHKIKGVDYALEQIHNNKEA 226 (244)
T ss_pred HHHHHHHHHHh---CCCCcCceEEEcCchhhHHHHHhccc-------------eeEEEEeeecccchHHHHHHhhchhhh
Confidence 45788888887 998 9999999999999999999997 2555664 345677777666666666
Q ss_pred HHHHHHhhc
Q 003682 777 LLGLAEASA 785 (803)
Q Consensus 777 L~~l~~~~~ 785 (803)
+-.|.+...
T Consensus 227 ~p~l~~~~~ 235 (244)
T KOG3109|consen 227 LPELWEILE 235 (244)
T ss_pred chHHhhccc
Confidence 666666543
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=92.70 E-value=0.37 Score=54.55 Aligned_cols=101 Identities=18% Similarity=0.239 Sum_probs=59.1
Q ss_pred CCCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003682 273 KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 352 (803)
Q Consensus 273 ~~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~ 352 (803)
.+..++.+..++ .|=-+..++.+.++|+.-|+.+ |++...+.. . ++.+.+.+.+ .| ..-.-
T Consensus 283 ~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~~----~----~~~l~~~~~~----~G-v~~~R 343 (468)
T PF13844_consen 283 EDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPAS----G----EARLRRRFAA----HG-VDPDR 343 (468)
T ss_dssp SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETSTT----H----HHHHHHHHHH----TT-S-GGG
T ss_pred CCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCHH----H----HHHHHHHHHH----cC-CChhh
Confidence 456666666665 4667889999999999999866 666554431 1 1223333332 22 22223
Q ss_pred EEEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeee
Q 003682 353 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIIC 394 (803)
Q Consensus 353 v~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~ 394 (803)
++ |.+..+.++..+.|+.+||++-|..+-|- .+.+||+.+
T Consensus 344 i~-f~~~~~~~ehl~~~~~~DI~LDT~p~nG~-TTt~dALwm 383 (468)
T PF13844_consen 344 II-FSPVAPREEHLRRYQLADICLDTFPYNGG-TTTLDALWM 383 (468)
T ss_dssp EE-EEE---HHHHHHHGGG-SEEE--SSS--S-HHHHHHHHH
T ss_pred EE-EcCCCCHHHHHHHhhhCCEEeeCCCCCCc-HHHHHHHHc
Confidence 44 55567889999999999999999887774 477899998
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.60 E-value=1.6 Score=43.21 Aligned_cols=61 Identities=25% Similarity=0.377 Sum_probs=46.2
Q ss_pred cCCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcE
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGI 595 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~l 595 (803)
+.++-+.+|+-|||.. ++. ..+...++|++| ++.+..|=++|.-+.++-+...+++.++++
T Consensus 5 ~~v~gvLlDlSGtLh~---e~~-avpga~eAl~rL-r~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHI---EDA-AVPGAVEALKRL-RDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred cccceEEEeccceEec---ccc-cCCCHHHHHHHH-HhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 4578899999999988 444 557889999999 888999999888777766555555444443
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=92.45 E-value=5.6 Score=44.55 Aligned_cols=73 Identities=12% Similarity=0.118 Sum_probs=48.5
Q ss_pred EEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccc----cccC
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC----SPSL 429 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~----~~~l 429 (803)
+.+.+.++.. +++..||++| ..-|+| +..|+++++ .|+|+.-..+- ++.+
T Consensus 290 v~~~~~~p~~---~ll~~~d~~I---~hgG~~-t~~eal~~G-------------------vP~v~~P~~~dQ~~~a~~~ 343 (401)
T cd03784 290 VRVVDFVPHD---WLLPRCAAVV---HHGGAG-TTAAALRAG-------------------VPQLVVPFFGDQPFWAARV 343 (401)
T ss_pred eEEeCCCCHH---HHhhhhheee---ecCCch-hHHHHHHcC-------------------CCEEeeCCCCCcHHHHHHH
Confidence 4556667754 4578899998 356765 668999984 44555544441 2222
Q ss_pred ---CCCceeCCC--CHHHHHHHHHHHhC
Q 003682 430 ---SGAIRVNPW--NIDAVAEAMDSALG 452 (803)
Q Consensus 430 ---~~~~lvnP~--d~~~~a~ai~~aL~ 452 (803)
+.|+.+++. +.+++++++.++|+
T Consensus 344 ~~~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 344 AELGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred HHCCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 236666554 68999999999998
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=92.43 E-value=11 Score=41.54 Aligned_cols=91 Identities=12% Similarity=0.068 Sum_probs=55.2
Q ss_pred HHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccccc--ccC---------C
Q 003682 362 FYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS--PSL---------S 430 (803)
Q Consensus 362 ~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~--~~l---------~ 430 (803)
.+++.++|++||+++.=| | ++++-|..+++. |.|+=-+...+ ++. .
T Consensus 243 ~~dm~~~~~~ADLvIsRa---G-a~Ti~E~~a~g~-------------------P~IliP~p~~~~~~Q~~NA~~l~~~g 299 (357)
T COG0707 243 IDDMAALLAAADLVISRA---G-ALTIAELLALGV-------------------PAILVPYPPGADGHQEYNAKFLEKAG 299 (357)
T ss_pred HhhHHHHHHhccEEEeCC---c-ccHHHHHHHhCC-------------------CEEEeCCCCCccchHHHHHHHHHhCC
Confidence 346999999999988533 3 467889999954 34444444331 221 2
Q ss_pred CCceeCCCC--HHHHHHHHHHHhCCCHHHHHHHHHHhhcccccCCHHH
Q 003682 431 GAIRVNPWN--IDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAY 476 (803)
Q Consensus 431 ~~~lvnP~d--~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~ 476 (803)
.|+.+.-.+ .+.+++.|.+++.. ++....+.+..+..-..+...+
T Consensus 300 aa~~i~~~~lt~~~l~~~i~~l~~~-~~~l~~m~~~a~~~~~p~aa~~ 346 (357)
T COG0707 300 AALVIRQSELTPEKLAELILRLLSN-PEKLKAMAENAKKLGKPDAAER 346 (357)
T ss_pred CEEEeccccCCHHHHHHHHHHHhcC-HHHHHHHHHHHHhcCCCCHHHH
Confidence 366666555 78999999999974 3333333333343333343333
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=92.36 E-value=12 Score=41.20 Aligned_cols=261 Identities=15% Similarity=0.078 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHHHHHh--cC
Q 003682 119 QAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL--NA 196 (803)
Q Consensus 119 ~~Y~~vN~~fa~~i~~~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il~~ll--~~ 196 (803)
+..-..=..|++.+.+ .+| |+|.||.=-...+..-+....-++||+..--= -=+.+. .-|.-+|..|-+. -+
T Consensus 50 ~~~~~~~~~~~~~~~~-~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~HieaG-lRs~d~--~~g~~de~~R~~i~~la 123 (346)
T PF02350_consen 50 KSTGLAIIELADVLER-EKP--DAVLVLGDRNEALAAALAAFYLNIPVAHIEAG-LRSGDR--TEGMPDEINRHAIDKLA 123 (346)
T ss_dssp HHHHHHHHHHHHHHHH-HT---SEEEEETTSHHHHHHHHHHHHTT-EEEEES------S-T--TSSTTHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHh-cCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEecCC-CCcccc--CCCCchhhhhhhhhhhh
Confidence 3444444555555544 478 99999988877777666666667776543210 000011 1123344443321 14
Q ss_pred CEEeccCHhhHHHHHHHHHHHhCceecccCceeeEEEcCeEEEEeEecccCChhHHHHHhCCchHHHHHHHHHHHhCCCE
Q 003682 197 DLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQI 276 (803)
Q Consensus 197 dligf~~~~~~~~Fl~~~~~~l~~~~~~~~~~~~~~~~g~~~~v~v~p~Gid~~~f~~~~~~~~~~~~~~~l~~~~~~~~ 276 (803)
|+-.--+..+.++.++ .|.+. .+ + ..+-.+++|.-........+... ...+.....++.
T Consensus 124 ~lhf~~t~~~~~~L~~-----~G~~~--~r----I--------~~vG~~~~D~l~~~~~~~~~~~~--~~~i~~~~~~~~ 182 (346)
T PF02350_consen 124 HLHFAPTEEARERLLQ-----EGEPP--ER----I--------FVVGNPGIDALLQNKEEIEEKYK--NSGILQDAPKPY 182 (346)
T ss_dssp SEEEESSHHHHHHHHH-----TT--G--GG----E--------EE---HHHHHHHHHHHTTCC-HH--HHHHHHCTTSEE
T ss_pred hhhccCCHHHHHHHHh-----cCCCC--Ce----E--------EEEChHHHHHHHHhHHHHhhhhh--hHHHHhccCCCE
Confidence 5555556766666664 24321 11 1 11234567755333221111110 112222234555
Q ss_pred EEEeecCcccc---cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003682 277 VMLGVDDMDIF---KGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 353 (803)
Q Consensus 277 iil~V~Rld~~---Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v 353 (803)
+++..=|.... ........+++.+.+. +++ .+|....++ + .....+.+...++ ..+
T Consensus 183 iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~----~vi~~~hn~----p---~~~~~i~~~l~~~---------~~v 241 (346)
T PF02350_consen 183 ILVTLHPVTNEDNPERLEQILEALKALAER-QNV----PVIFPLHNN----P---RGSDIIIEKLKKY---------DNV 241 (346)
T ss_dssp EEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTE----EEEEE--S-----H---HHHHHHHHHHTT----------TTE
T ss_pred EEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCC----cEEEEecCC----c---hHHHHHHHHhccc---------CCE
Confidence 56666555543 3456777788887776 443 355444322 1 2223332222221 124
Q ss_pred EEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC---C
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL---S 430 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l---~ 430 (803)
+ +..+++..++..+++.|++.|-.|- | +..||.++ +.|+|.=...|-.++. .
T Consensus 242 ~-~~~~l~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~l-------------------g~P~v~iR~~geRqe~r~~~ 296 (346)
T PF02350_consen 242 R-LIEPLGYEEYLSLLKNADLVVGDSS--G---IQEEAPSL-------------------GKPVVNIRDSGERQEGRERG 296 (346)
T ss_dssp E-EE----HHHHHHHHHHESEEEESSH--H---HHHHGGGG-------------------T--EEECSSS-S-HHHHHTT
T ss_pred E-EECCCCHHHHHHHHhcceEEEEcCc--c---HHHHHHHh-------------------CCeEEEecCCCCCHHHHhhc
Confidence 4 4447899999999999999887763 2 23398888 3446655555555544 3
Q ss_pred CCceeCCCCHHHHHHHHHHHhCC
Q 003682 431 GAIRVNPWNIDAVAEAMDSALGV 453 (803)
Q Consensus 431 ~~~lvnP~d~~~~a~ai~~aL~~ 453 (803)
.+++|. .|.+++.++|.+++..
T Consensus 297 ~nvlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 297 SNVLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp SEEEET-SSHHHHHHHHHHHHH-
T ss_pred ceEEeC-CCHHHHHHHHHHHHhC
Confidence 456664 7999999999999974
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=92.26 E-value=0.23 Score=54.13 Aligned_cols=49 Identities=24% Similarity=0.295 Sum_probs=37.6
Q ss_pred EEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCC----CCeEEEEc---CCChhhHHHHh
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDP----KNVVFLVS---GKDRDTLAEWF 587 (803)
Q Consensus 534 li~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~----g~~v~IaT---GR~~~~l~~~~ 587 (803)
.|+||+||||.. ...+-+...++|+.| ... |..+.++| |++.....+.+
T Consensus 2 ~~ifD~DGvL~~----g~~~i~ga~eal~~L-~~~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFR----GKKPIAGASDALRRL-NRNQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceEC----CccccHHHHHHHHHH-hccccccCCCEEEEecCCCCCHHHHHHHH
Confidence 589999999998 344588999999999 776 88888876 55566644443
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=92.18 E-value=0.38 Score=48.99 Aligned_cols=23 Identities=9% Similarity=0.174 Sum_probs=19.9
Q ss_pred cccEEEEeCChhhHHHHHHcchh
Q 003682 717 PDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 717 ~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
.+.+.+.|||.||.+||+.|++.
T Consensus 175 ~~~~~aYsDS~~D~pmL~~a~~~ 197 (210)
T TIGR01545 175 LKLYSGYSDSKQDNPLLAFCEHR 197 (210)
T ss_pred hhheEEecCCcccHHHHHhCCCc
Confidence 34568999999999999999974
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=92.04 E-value=1.4 Score=47.44 Aligned_cols=141 Identities=16% Similarity=0.166 Sum_probs=89.9
Q ss_pred CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003682 274 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 353 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v 353 (803)
++..|+-=-.-|++-++...|+++.+.+. . ++.++.-- +.+..++++.++|.+...++ ||. ..+
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~~--~----~~kIivPL----sYg~~n~~Yi~~V~~~~~~l---F~~---~~~ 247 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQFG--D----DVKIIVPL----SYGANNQAYIQQVIQAGKEL---FGA---ENF 247 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhcC--C----CeEEEEEC----CCCCchHHHHHHHHHHHHHh---cCc---cce
Confidence 34445444567888889888887765432 1 22233211 23333566777777766554 332 235
Q ss_pred EEecCCCCHHHHHHHHHhcccceecccc-cCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC-CC
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVR-DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-SG 431 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~Adv~v~~S~~-EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~~ 431 (803)
..+++.++.+|+.++++.+|+.++...| .|+|..++ .+.+ |.++++|+-.-....+ +.
T Consensus 248 ~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~-------------------G~~v~L~~~np~~~~l~~~ 307 (360)
T PF07429_consen 248 QILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL-------------------GKKVFLSRDNPFWQDLKEQ 307 (360)
T ss_pred eEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc-------------------CCeEEEecCChHHHHHHhC
Confidence 6788899999999999999999999975 89997643 2332 6789999988777777 34
Q ss_pred Ccee----CCCCHHHHHHHHHHH
Q 003682 432 AIRV----NPWNIDAVAEAMDSA 450 (803)
Q Consensus 432 ~~lv----nP~d~~~~a~ai~~a 450 (803)
++.| +.-|...+++|=+++
T Consensus 308 ~ipVlf~~d~L~~~~v~ea~rql 330 (360)
T PF07429_consen 308 GIPVLFYGDELDEALVREAQRQL 330 (360)
T ss_pred CCeEEeccccCCHHHHHHHHHHH
Confidence 5443 334445555444433
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.70 E-value=0.19 Score=50.65 Aligned_cols=34 Identities=24% Similarity=0.200 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 555 AEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 555 ~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+.+.+.|+.| ++. +.++|+|+.....++.++..+
T Consensus 71 pg~~e~L~~L-~~~-~~~~IvS~~~~~~~~~~l~~~ 104 (205)
T PRK13582 71 PGAVEFLDWL-RER-FQVVILSDTFYEFAGPLMRQL 104 (205)
T ss_pred CCHHHHHHHH-Hhc-CCEEEEeCCcHHHHHHHHHHc
Confidence 4456788887 666 899999999999988887654
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=91.43 E-value=0.22 Score=50.28 Aligned_cols=37 Identities=14% Similarity=0.105 Sum_probs=28.1
Q ss_pred CCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 553 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 553 is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+.+.+.+.|++| ++.|+.++|+||.+...+...+..+
T Consensus 76 ~~~g~~~~L~~L-~~~g~~~~i~Sn~~~~~~~~~l~~~ 112 (205)
T TIGR01454 76 VFPGVPELLAEL-RADGVGTAIATGKSGPRARSLLEAL 112 (205)
T ss_pred cCCCHHHHHHHH-HHCCCeEEEEeCCchHHHHHHHHHc
Confidence 345667788887 7778999999998888887777543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=90.94 E-value=0.54 Score=47.92 Aligned_cols=37 Identities=5% Similarity=-0.009 Sum_probs=29.7
Q ss_pred CCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 553 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 553 is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
+.+.+.+.|+.+ ++.|+.++|+||.....++.++..+
T Consensus 71 l~pg~~e~l~~l-~~~g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 71 IREGFREFVAFI-NEHGIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred ccccHHHHHHHH-HHCCCeEEEECCCcHHHHHHHHHhh
Confidence 345566778887 7889999999999998888888654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=90.77 E-value=0.49 Score=47.55 Aligned_cols=36 Identities=14% Similarity=0.029 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 554 NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 554 s~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
.+.+.+.|+.+ ++.|..++|+||.+...++.+.+.+
T Consensus 89 ~~~~~~~l~~l-~~~g~~v~ivS~s~~~~v~~~~~~l 124 (202)
T TIGR01490 89 YPEARDLIRWH-KAEGHTIVLVSASLTILVKPLARIL 124 (202)
T ss_pred cHHHHHHHHHH-HHCCCEEEEEeCCcHHHHHHHHHHc
Confidence 45667788887 7889999999999988888887654
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=90.41 E-value=2.5 Score=41.25 Aligned_cols=49 Identities=12% Similarity=0.145 Sum_probs=34.0
Q ss_pred ECCeEEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 685 SGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 685 ~g~~~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
..-.++||.|. +|-.-++.|.+.. |++++++++|=|.....+--+..|.
T Consensus 97 ~~F~~~eI~~g--sK~~Hf~~i~~~t---gI~y~eMlFFDDe~~N~~~v~~lGV 145 (169)
T PF12689_consen 97 EYFDYLEIYPG--SKTTHFRRIHRKT---GIPYEEMLFFDDESRNIEVVSKLGV 145 (169)
T ss_dssp CCECEEEESSS---HHHHHHHHHHHH------GGGEEEEES-HHHHHHHHTTT-
T ss_pred hhcchhheecC--chHHHHHHHHHhc---CCChhHEEEecCchhcceeeEecCc
Confidence 33456899885 9999999999998 9999999999997665555555554
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=90.14 E-value=0.99 Score=47.08 Aligned_cols=58 Identities=17% Similarity=0.231 Sum_probs=45.0
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
...+|+||+|.||++.........+.+.+.|.+| ++.|..+++=|--+.+-+..-+..
T Consensus 121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~L-k~~g~vLvLWSyG~~eHV~~sl~~ 178 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLREL-KEQGCVLVLWSYGNREHVRHSLKE 178 (297)
T ss_pred CCcEEEEECCCcccccCCccccCChHHHHHHHHH-HHcCCEEEEecCCCHHHHHHHHHH
Confidence 4579999999999984322334678999999999 889988888777777766666644
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=90.04 E-value=0.59 Score=48.16 Aligned_cols=47 Identities=28% Similarity=0.364 Sum_probs=38.1
Q ss_pred EEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 692 VKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 692 I~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
..|.+.-||..++.+++.....|.+.+.|+++|||.||.......+.
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~ 190 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRP 190 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCC
Confidence 44677889999999998754447889999999999999987766544
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.59 E-value=0.37 Score=47.37 Aligned_cols=38 Identities=16% Similarity=0.037 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchh
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s 739 (803)
|.-.+..+++++ ++++...+++||...|+.....+|..
T Consensus 107 ~~gm~~~~~~~~---~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 107 KPGMLLSALKEY---NIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ChHHHHHHHHHh---CCCccceEEecCcHHHHHHHHHCCCC
Confidence 556777888888 89999999999999999999999873
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=89.30 E-value=0.68 Score=47.18 Aligned_cols=66 Identities=18% Similarity=0.114 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCCh-hhHHHHHHcchhcCCCCCCCCcceEEEEeCCC----CccceeEeCCHhHH
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEI 773 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~-NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~----~s~A~~~v~~~~ev 773 (803)
+....+.+++++. |++++++++|||+. +|+...+.+|.. .+.+..|.. ...+.+.+++..++
T Consensus 154 ~~~~~~~~~~~~~--~~~~~~~v~igD~~~~di~~A~~~G~~-----------~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 154 DKEIFNYALERMP--KFSKEEVLMIGDSLTADIKGGQNAGLD-----------TCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred CHHHHHHHHHHhc--CCCchheEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCceEECCHHHH
Confidence 5566777777642 68899999999997 899999999973 245555432 23567888888888
Q ss_pred HHHH
Q 003682 774 LRML 777 (803)
Q Consensus 774 ~~~L 777 (803)
..+|
T Consensus 221 ~~~~ 224 (224)
T TIGR02254 221 YEIL 224 (224)
T ss_pred HhhC
Confidence 7653
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=89.08 E-value=0.28 Score=47.41 Aligned_cols=56 Identities=18% Similarity=0.281 Sum_probs=38.2
Q ss_pred eEEEEecCCcCCCCCCCCC----------------CCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 533 RAILLDYDGTIMVPGSIST----------------SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 533 kli~~DlDGTLl~~~~~~~----------------~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
|++++|+||||+....... ..-|.+.+.|+.+++ ...++|.|..+...+...+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 6899999999997431111 024677777887733 5899999999999888888766
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.61 E-value=1.2 Score=53.61 Aligned_cols=47 Identities=13% Similarity=0.143 Sum_probs=34.0
Q ss_pred CCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcCCCCcEEecCc
Q 003682 550 STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHG 600 (803)
Q Consensus 550 ~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l~~l~lia~nG 600 (803)
.+++-+.+..+|++| .+.++..+.|||-+.-..-...+ +-|++.+.+
T Consensus 703 eNkLK~~T~~VI~eL-~~AnIRtVMcTGDNllTaisVak---eCgmi~p~~ 749 (1140)
T KOG0208|consen 703 ENKLKEETKRVIDEL-NRANIRTVMCTGDNLLTAISVAK---ECGMIEPQV 749 (1140)
T ss_pred ecccccccHHHHHHH-HhhcceEEEEcCCchheeeehhh---cccccCCCC
Confidence 345667788888888 77899999999999887666553 445554443
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=88.21 E-value=4.7 Score=42.95 Aligned_cols=125 Identities=16% Similarity=0.172 Sum_probs=82.0
Q ss_pred CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE-EecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCccc
Q 003682 274 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ-IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQP 352 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~-i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~ 352 (803)
++..|+---.=|++-++.+.|+++.+++.+ ++.++. .+.|+ + .+++.++|.+...+ .||. ..
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~~------~v~ii~PlsYp~-g----n~~Yi~~V~~~~~~---lF~~---~~ 207 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFGD------NVKIIVPMGYPA-N----NQAYIEEVRQAGLA---LFGA---EN 207 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhCC------CeEEEEECCcCC-C----CHHHHHHHHHHHHH---hcCc---cc
Confidence 344454445678999999999998776432 233433 23332 2 24566777765554 3442 24
Q ss_pred EEEecCCCCHHHHHHHHHhcccceeccc-ccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEecccccccccC-C
Q 003682 353 VVLIDTPLQFYERIAYYVIAECCLVTAV-RDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL-S 430 (803)
Q Consensus 353 v~~~~~~~~~~~l~aly~~Adv~v~~S~-~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l-~ 430 (803)
+..+++.++.+|+.++++.+|+.++.-- .+|+|..++=- .. |.|+++|+-.-.-..+ +
T Consensus 208 ~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi-~~-------------------G~~v~l~r~n~fwqdl~e 267 (322)
T PRK02797 208 FQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLI-QL-------------------GKPVVLSRDNPFWQDLTE 267 (322)
T ss_pred EEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHH-HC-------------------CCcEEEecCCchHHHHHh
Confidence 6778999999999999999999998875 58999775421 11 5678888666655555 4
Q ss_pred CCcee
Q 003682 431 GAIRV 435 (803)
Q Consensus 431 ~~~lv 435 (803)
.++-|
T Consensus 268 ~gv~V 272 (322)
T PRK02797 268 QGLPV 272 (322)
T ss_pred CCCeE
Confidence 45544
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.09 E-value=0.91 Score=47.11 Aligned_cols=37 Identities=16% Similarity=0.046 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCC-hhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~-~NDi~Mf~~ag~ 738 (803)
+......+++++ |++++++++|||+ ..|+...+.+|.
T Consensus 165 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~A~~aG~ 202 (238)
T PRK10748 165 FSDMYHLAAEKL---NVPIGEILHVGDDLTTDVAGAIRCGM 202 (238)
T ss_pred cHHHHHHHHHHc---CCChhHEEEEcCCcHHHHHHHHHCCC
Confidence 577888888988 9999999999999 699999999997
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=87.72 E-value=0.73 Score=47.14 Aligned_cols=60 Identities=13% Similarity=0.016 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHhhhCC---CCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCCC----ccceeEeCCHh
Q 003682 699 KGLVAQHQLETMHQKG---MLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP----SKAKYYLDDTA 771 (803)
Q Consensus 699 Kg~al~~ll~~l~~~g---i~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~~----s~A~~~v~~~~ 771 (803)
+.......++++ + ++++++++|||+..|+.+.+.+|. .+++|..|... ..+.+++++..
T Consensus 139 ~p~~~~~a~~~~---~~~~~~~~~~v~IgDs~~di~aA~~aG~-----------~~i~v~~~~~~~~~~~~~d~vi~~~~ 204 (220)
T PLN02811 139 APDIFLAAARRF---EDGPVDPGKVLVFEDAPSGVEAAKNAGM-----------SVVMVPDPRLDKSYCKGADQVLSSLL 204 (220)
T ss_pred CcHHHHHHHHHh---CCCCCCccceEEEeccHhhHHHHHHCCC-----------eEEEEeCCCCcHhhhhchhhHhcCHh
Confidence 556788888888 6 889999999999999999999997 34666655321 23445555554
Q ss_pred H
Q 003682 772 E 772 (803)
Q Consensus 772 e 772 (803)
+
T Consensus 205 e 205 (220)
T PLN02811 205 D 205 (220)
T ss_pred h
Confidence 4
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=87.60 E-value=1 Score=43.74 Aligned_cols=57 Identities=9% Similarity=0.105 Sum_probs=36.9
Q ss_pred CeEEEEecCCcCCCCCCCCCC---------------------CCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhcC
Q 003682 532 NRAILLDYDGTIMVPGSISTS---------------------PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 532 ~kli~~DlDGTLl~~~~~~~~---------------------is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~l 590 (803)
++.+++|+|+||+........ .-|.+.+.|++| .+. ..++|.|.-+...++.++..+
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l-~~~-yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERV-SKW-YELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHH-Hhc-CEEEEEcCCcHHHHHHHHHHH
Confidence 368999999999974311110 125566777776 433 777777777777776666543
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=87.27 E-value=1.1 Score=44.76 Aligned_cols=58 Identities=12% Similarity=0.059 Sum_probs=42.4
Q ss_pred cCCeEEEEecCCcCCCCCCCCC----CCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHHhhc
Q 003682 530 TKNRAILLDYDGTIMVPGSIST----SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSS 589 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~~----~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~~~~ 589 (803)
..+|++++|||+||++..+... ..-|.+.+.|+.+.+ ...|+|=|..+...+...+..
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~ 80 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTE 80 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHH
Confidence 4568999999999998432121 123677888888743 788999999888888777754
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=86.97 E-value=1.8 Score=48.21 Aligned_cols=71 Identities=17% Similarity=0.205 Sum_probs=55.1
Q ss_pred HHHHHHHHHhcCCeEEEEecCCcCCCCC-------------CCCCCCCHHHHHHHHHHhcCCCCeEEEEcCCChhhHHHH
Q 003682 520 IDHIVSAYKRTKNRAILLDYDGTIMVPG-------------SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEW 586 (803)
Q Consensus 520 ~~~~~~~y~~~~~kli~~DlDGTLl~~~-------------~~~~~is~~~~~aL~~L~~~~g~~v~IaTGR~~~~l~~~ 586 (803)
...+..+......|.+++|+|+||.... ...+..-....+.+..| .++|+.++|||=-....+++.
T Consensus 210 i~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l-~kqGVlLav~SKN~~~da~ev 288 (574)
T COG3882 210 IASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGL-KKQGVLLAVCSKNTEKDAKEV 288 (574)
T ss_pred HHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHH-HhccEEEEEecCCchhhHHHH
Confidence 4556666666778999999999998621 01223446778888898 999999999999999999999
Q ss_pred hhcCC
Q 003682 587 FSSCE 591 (803)
Q Consensus 587 ~~~l~ 591 (803)
+...|
T Consensus 289 F~khp 293 (574)
T COG3882 289 FRKHP 293 (574)
T ss_pred HhhCC
Confidence 97644
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=86.49 E-value=1.1 Score=43.40 Aligned_cols=42 Identities=21% Similarity=0.178 Sum_probs=34.2
Q ss_pred EeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcC
Q 003682 693 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 741 (803)
Q Consensus 693 ~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a 741 (803)
-+-|.+|+..++.+.+. ++.++++|||..|++..+.....+|
T Consensus 142 s~fG~dK~~vI~~l~e~-------~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 142 SQFGHDKSSVIHELSEP-------NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cccCCCcchhHHHhhcC-------CceEEEecCCcccccHhhhhhhHhh
Confidence 35588899999888653 5669999999999999988887655
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.31 E-value=0.4 Score=49.78 Aligned_cols=31 Identities=16% Similarity=0.080 Sum_probs=20.0
Q ss_pred CCeEEEEecCCcCCCCCCCCCCCCHHHHHHHHHH
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNL 564 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~~~~~is~~~~~aL~~L 564 (803)
++|.|+||+||||++ ....+.....++++.+
T Consensus 9 ~~k~iiFDlDGTL~D---~~~~~~~a~~~~~~~~ 39 (238)
T PRK10748 9 RISALTFDLDDTLYD---NRPVILRTEQEALAFV 39 (238)
T ss_pred CceeEEEcCcccccC---ChHHHHHHHHHHHHHH
Confidence 468999999999999 3333333333444333
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=86.08 E-value=3.7 Score=45.97 Aligned_cols=75 Identities=15% Similarity=0.094 Sum_probs=48.5
Q ss_pred EEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeecCCcccccccCCCCCCCCCceEEeccccccc----ccC
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS----PSL 429 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~----~~l 429 (803)
+.+.+.+++. .++..||++|.. -|.| +..|+++++ .|+|+.-..+-. ..+
T Consensus 277 v~~~~~~p~~---~ll~~~~~~I~h---gG~~-t~~Eal~~G-------------------~P~v~~p~~~dq~~~a~~l 330 (392)
T TIGR01426 277 VEVRQWVPQL---EILKKADAFITH---GGMN-STMEALFNG-------------------VPMVAVPQGADQPMTARRI 330 (392)
T ss_pred eEEeCCCCHH---HHHhhCCEEEEC---CCch-HHHHHHHhC-------------------CCEEecCCcccHHHHHHHH
Confidence 3455677764 567899988864 4665 668999984 455654333321 112
Q ss_pred ---CCCceeCC--CCHHHHHHHHHHHhCCC
Q 003682 430 ---SGAIRVNP--WNIDAVAEAMDSALGVS 454 (803)
Q Consensus 430 ---~~~~lvnP--~d~~~~a~ai~~aL~~~ 454 (803)
..|..++. .+.++++++|.++|..+
T Consensus 331 ~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~ 360 (392)
T TIGR01426 331 AELGLGRHLPPEEVTAEKLREAVLAVLSDP 360 (392)
T ss_pred HHCCCEEEeccccCCHHHHHHHHHHHhcCH
Confidence 22555553 46789999999999854
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=85.83 E-value=0.69 Score=48.85 Aligned_cols=39 Identities=18% Similarity=0.198 Sum_probs=31.9
Q ss_pred CCCHHHHHH-HHHHHhhhCC--CCcccEEEEeCChhhHHHHHHcc
Q 003682 696 GVNKGLVAQ-HQLETMHQKG--MLPDFVLCIGDDRSDEDMFEVIK 737 (803)
Q Consensus 696 gv~Kg~al~-~ll~~l~~~g--i~~d~vla~GD~~NDi~Mf~~ag 737 (803)
..+|...+. ..++++ + .++++|+++|||.||+.|...+.
T Consensus 190 ~~~K~~~v~~~~~~~~---~~~~~~~~vI~vGDs~~Dl~ma~g~~ 231 (277)
T TIGR01544 190 TFNKNHDVALRNTEYF---NQLKDRSNIILLGDSQGDLRMADGVA 231 (277)
T ss_pred ccccHHHHHHHHHHHh---CccCCcceEEEECcChhhhhHhcCCC
Confidence 467887666 577777 6 78999999999999999977763
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=85.55 E-value=3.1 Score=41.70 Aligned_cols=37 Identities=22% Similarity=0.322 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 698 ~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
-|+..++.+++.- +++.. ++|+|||.+|.+||+.+..
T Consensus 191 ~ka~i~e~~~ele---~~d~s-a~~VGDSItDv~ml~~~rg 227 (315)
T COG4030 191 EKAKIMEGYCELE---GIDFS-AVVVGDSITDVKMLEAARG 227 (315)
T ss_pred chhHHHHHHHhhc---CCCcc-eeEecCcccchHHHHHhhc
Confidence 3677777777764 55444 8999999999999999865
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=84.53 E-value=1.6 Score=41.94 Aligned_cols=37 Identities=24% Similarity=0.353 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
+..+.+.+++.+ |++++++++|||+..|+.+.+.+|.
T Consensus 135 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~d~~~A~~~G~ 171 (176)
T PF13419_consen 135 DPDAYRRALEKL---GIPPEEILFVGDSPSDVEAAKEAGI 171 (176)
T ss_dssp SHHHHHHHHHHH---TSSGGGEEEEESSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHcCC
Confidence 468899999999 9999999999999999999999997
|
... |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=84.04 E-value=0.79 Score=43.19 Aligned_cols=71 Identities=20% Similarity=0.187 Sum_probs=39.1
Q ss_pred hcCCCCCeEEEeCccccchHHHHHhhCCCCeEEEEEecCCCChhhhhcCCCcHHHH-----HHHhcCCEEeccCHhhHHH
Q 003682 135 VISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELL-----RALLNADLIGFHTFDYARH 209 (803)
Q Consensus 135 ~~~~~~d~iwihDyhl~llp~~lr~~~~~~~i~~flH~pfP~~~~~~~lp~~~~il-----~~ll~~dligf~~~~~~~~ 209 (803)
..+| |+|++|+++..+++.++++. .++|+.+.+|..+.... .++...++ ..+-.+|.+-..+....+.
T Consensus 71 ~~~~--Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~ 143 (160)
T PF13579_consen 71 RERP--DVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRY 143 (160)
T ss_dssp T-----SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHH
T ss_pred ccCC--eEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHH
Confidence 3345 99999999877777777733 37999999997543221 11111121 3445688888888776666
Q ss_pred HHH
Q 003682 210 FLS 212 (803)
Q Consensus 210 Fl~ 212 (803)
+.+
T Consensus 144 l~~ 146 (160)
T PF13579_consen 144 LRR 146 (160)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=83.56 E-value=1.1 Score=41.54 Aligned_cols=37 Identities=19% Similarity=0.188 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhhhCC-CCcccEEEEeC-ChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKG-MLPDFVLCIGD-DRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~g-i~~d~vla~GD-~~NDi~Mf~~ag~ 738 (803)
|...++++++.+ + ++++++++||| +.+|+.+.+.+|.
T Consensus 87 ~~~~~~~~~~~~---~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 87 KPGMFLEALKRF---NEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred ChHHHHHHHHHc---CCCChhheEEEcCCCcccHHHHHHCCC
Confidence 678999999988 7 99999999999 7999999999987
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=83.47 E-value=0.85 Score=45.56 Aligned_cols=28 Identities=25% Similarity=0.483 Sum_probs=21.2
Q ss_pred CCHHHHHHHHHHhcCCCCeEEEEcCCChh
Q 003682 553 PNAEAVAILDNLCRDPKNVVFLVSGKDRD 581 (803)
Q Consensus 553 is~~~~~aL~~L~~~~g~~v~IaTGR~~~ 581 (803)
+-+.+.++|++| .+.|..++++|+|+..
T Consensus 74 p~~gA~e~l~~L-~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 74 PIPGAVEALKKL-RDKGHEIVIITARPPE 101 (191)
T ss_dssp B-TTHHHHHHHH-HTSTTEEEEEEE-SSS
T ss_pred ccHHHHHHHHHH-HHcCCcEEEEEecCcc
Confidence 456788999999 7788888888888764
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=83.08 E-value=3.9 Score=43.57 Aligned_cols=92 Identities=9% Similarity=0.005 Sum_probs=56.5
Q ss_pred CCEEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCchhHHHHHHHHHHHHHHHhcccCCCCcccE
Q 003682 274 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 353 (803)
Q Consensus 274 ~~~iil~V~Rld~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~i~~~~~~~~~~~~~l~~~v~~lv~~in~~~~~~~~~~v 353 (803)
.+++++..|-.|+.+.....++|+..+ .++++ + .+++| +.. +.+++++ +.+.. + + .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~--i-~vv~G-~~~---~~~~~l~----~~~~~-~---~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS--I-TLVTG-SSN---PNLDELK----KFAKE-Y---P-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce--E-EEEEC-CCC---cCHHHHH----HHHHh-C---C-----CE
Confidence 367999999999988667778777653 22222 2 23344 221 2233333 33222 1 1 13
Q ss_pred EEecCCCCHHHHHHHHHhcccceecccccCCCCCceeeeeeec
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQ 396 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~Adv~v~~S~~EG~~lv~~Ea~a~~~ 396 (803)
. +.++ .+++..+|+.||+++.+ -|.+..|+++++.
T Consensus 227 ~-~~~~--~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~ 261 (279)
T TIGR03590 227 I-LFID--VENMAELMNEADLAIGA-----AGSTSWERCCLGL 261 (279)
T ss_pred E-EEeC--HHHHHHHHHHCCEEEEC-----CchHHHHHHHcCC
Confidence 3 3333 56899999999998874 4578999999954
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=83.04 E-value=0.7 Score=47.10 Aligned_cols=14 Identities=36% Similarity=0.634 Sum_probs=13.1
Q ss_pred CeEEEEecCCcCCC
Q 003682 532 NRAILLDYDGTIMV 545 (803)
Q Consensus 532 ~kli~~DlDGTLl~ 545 (803)
+|+|+||+||||++
T Consensus 1 ~k~viFD~DGTL~d 14 (224)
T TIGR02254 1 YKTLLFDLDDTILD 14 (224)
T ss_pred CCEEEEcCcCcccc
Confidence 57999999999999
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=82.46 E-value=1.5 Score=44.62 Aligned_cols=15 Identities=40% Similarity=0.685 Sum_probs=13.6
Q ss_pred CCeEEEEecCCcCCC
Q 003682 531 KNRAILLDYDGTIMV 545 (803)
Q Consensus 531 ~~kli~~DlDGTLl~ 545 (803)
.+|+.+||+||||++
T Consensus 4 ~~~la~FDfDgTLt~ 18 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQ 18 (210)
T ss_pred cCcEEEEcCCCCCcc
Confidence 468999999999998
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=82.38 E-value=2.7 Score=40.60 Aligned_cols=59 Identities=12% Similarity=0.017 Sum_probs=44.0
Q ss_pred cCCeEEEEecCCcCCCCCCCC-----C---------------------------CCCHHHHHHHHHHhcCCCCeEEEEcC
Q 003682 530 TKNRAILLDYDGTIMVPGSIS-----T---------------------------SPNAEAVAILDNLCRDPKNVVFLVSG 577 (803)
Q Consensus 530 ~~~kli~~DlDGTLl~~~~~~-----~---------------------------~is~~~~~aL~~L~~~~g~~v~IaTG 577 (803)
.++..+++|||.||+...... . .+-|.+.+.|+++ + ++..++|+|.
T Consensus 4 ~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l-~-~~yel~I~T~ 81 (156)
T TIGR02250 4 EKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEA-S-KLYEMHVYTM 81 (156)
T ss_pred CCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHH-H-hhcEEEEEeC
Confidence 457889999999999743110 0 0135778899998 4 3599999999
Q ss_pred CChhhHHHHhhcC
Q 003682 578 KDRDTLAEWFSSC 590 (803)
Q Consensus 578 R~~~~l~~~~~~l 590 (803)
.+...+...+..+
T Consensus 82 ~~~~yA~~vl~~l 94 (156)
T TIGR02250 82 GTRAYAQAIAKLI 94 (156)
T ss_pred CcHHHHHHHHHHh
Confidence 9999888888655
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=82.20 E-value=1.1 Score=44.24 Aligned_cols=37 Identities=11% Similarity=0.157 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
+....+++++++ |++++++++|||+..|+..-+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~l~vgD~~~di~aA~~~G~ 179 (184)
T TIGR01993 143 SPQAYEKALREA---GVDPERAIFFDDSARNIAAAKALGM 179 (184)
T ss_pred CHHHHHHHHHHh---CCCccceEEEeCCHHHHHHHHHcCC
Confidence 567889999999 9999999999999999999999986
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.97 E-value=3 Score=50.12 Aligned_cols=67 Identities=19% Similarity=0.272 Sum_probs=47.2
Q ss_pred EEEEEeCCCCHHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcchhcCCCCCCCCcceEEEEeCCC----Cccce
Q 003682 689 IVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAK 764 (803)
Q Consensus 689 ~vEI~p~gv~Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~s~a~~~~~~~~~~~~v~vG~~----~s~A~ 764 (803)
+-|+.|. +|...++.+.++ | ..|+++||+.||-+.+..+.. ++++|.. ...|+
T Consensus 580 ~AellPe--dK~~~V~~l~~~----g---~~VamVGDGINDAPALA~AdV--------------GiAmG~GtDvA~eaAD 636 (713)
T COG2217 580 RAELLPE--DKAEIVRELQAE----G---RKVAMVGDGINDAPALAAADV--------------GIAMGSGTDVAIEAAD 636 (713)
T ss_pred eccCCcH--HHHHHHHHHHhc----C---CEEEEEeCCchhHHHHhhcCe--------------eEeecCCcHHHHHhCC
Confidence 3455663 588888887653 3 569999999999999999975 5666652 35577
Q ss_pred eEe--CCHhHHHHHHH
Q 003682 765 YYL--DDTAEILRMLL 778 (803)
Q Consensus 765 ~~v--~~~~ev~~~L~ 778 (803)
..+ ++...+.+.++
T Consensus 637 vvL~~~dL~~v~~ai~ 652 (713)
T COG2217 637 VVLMRDDLSAVPEAID 652 (713)
T ss_pred EEEecCCHHHHHHHHH
Confidence 765 56666665554
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.66 E-value=3 Score=40.26 Aligned_cols=68 Identities=16% Similarity=0.268 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHhcCCeEEEEecCCcCCCCCC------------------------------CCCCCCHHHHHHHHHHhcC
Q 003682 518 LSIDHIVSAYKRTKNRAILLDYDGTIMVPGS------------------------------ISTSPNAEAVAILDNLCRD 567 (803)
Q Consensus 518 l~~~~~~~~y~~~~~kli~~DlDGTLl~~~~------------------------------~~~~is~~~~~aL~~L~~~ 567 (803)
.++.++..+....+.-.+-||+|.|++-.++ ..-.++.+...-|-.+-+.
T Consensus 49 iSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~ 128 (237)
T COG3700 49 ISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR 128 (237)
T ss_pred EEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHh
Confidence 4567777777666666788899999995331 1123566666666666678
Q ss_pred CCCeEEEEcCCChhhHHH
Q 003682 568 PKNVVFLVSGKDRDTLAE 585 (803)
Q Consensus 568 ~g~~v~IaTGR~~~~l~~ 585 (803)
+|-.++++|||+...++.
T Consensus 129 RGD~i~FvTGRt~gk~d~ 146 (237)
T COG3700 129 RGDAIYFVTGRTPGKTDT 146 (237)
T ss_pred cCCeEEEEecCCCCcccc
Confidence 899999999998775443
|
|
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.54 E-value=2.2 Score=49.12 Aligned_cols=77 Identities=13% Similarity=0.239 Sum_probs=50.1
Q ss_pred CCeEEEEecCCcCCCCCC-------CCCCC-CHHHHHHHHHHhcCCCCeEEEEcCCChhh---HHHHhhcCCCCcEEecC
Q 003682 531 KNRAILLDYDGTIMVPGS-------ISTSP-NAEAVAILDNLCRDPKNVVFLVSGKDRDT---LAEWFSSCEGLGIAAEH 599 (803)
Q Consensus 531 ~~kli~~DlDGTLl~~~~-------~~~~i-s~~~~~aL~~L~~~~g~~v~IaTGR~~~~---l~~~~~~l~~l~lia~n 599 (803)
.-|+|+.|+|||++...- ..+.- ...+.+...+. +++|++++.+|.|+... .+.++..+.+.|-.--.
T Consensus 529 n~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~I-k~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPd 607 (738)
T KOG2116|consen 529 NDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKI-KENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPD 607 (738)
T ss_pred CCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHH-HhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCC
Confidence 468999999999997210 01111 24455666665 78899999999999764 34555544445555556
Q ss_pred cEEEEeCCc
Q 003682 600 GYFVRPNYG 608 (803)
Q Consensus 600 Ga~i~~~~~ 608 (803)
|-+|..+++
T Consensus 608 GPViLSPd~ 616 (738)
T KOG2116|consen 608 GPVILSPDS 616 (738)
T ss_pred CCEEeCCCc
Confidence 666665543
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=80.48 E-value=2.2 Score=42.66 Aligned_cols=37 Identities=27% Similarity=0.227 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhhhCCCCcccEEEEeCChhhHHHHHHcch
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~al~~ll~~l~~~gi~~d~vla~GD~~NDi~Mf~~ag~ 738 (803)
+....+.+++++ |++++++++|||+.+|+...+.+|.
T Consensus 150 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~Di~~A~~~G~ 186 (198)
T TIGR01428 150 APQVYQLALEAL---GVPPDEVLFVASNPWDLGGAKKFGF 186 (198)
T ss_pred CHHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHCCC
Confidence 467889999999 9999999999999999999999997
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 803 | ||||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 3e-59 | ||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 3e-59 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 4e-58 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 4e-12 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 4e-12 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 8e-11 |
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 803 | |||
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 0.0 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 0.0 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 2e-67 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 1e-08 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 9e-08 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 3e-06 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 3e-06 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 3e-05 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 1e-04 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 4e-04 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 4e-04 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 5e-04 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 5e-04 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 6e-04 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 6e-04 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 7e-04 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 8e-04 |
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 625 bits (1613), Expect = 0.0
Identities = 143/527 (27%), Positives = 246/527 (46%), Gaps = 48/527 (9%)
Query: 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQ 60
+++V N++ ++ G L + + L + ++ G E + E
Sbjct: 4 LVVVSNRIAPPDEHAASAGG----------LAVGILGAL-KAAGGLWFGWSGETGN--ED 50
Query: 61 DEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQA 120
+ + + + ++Y+ F LWP FHY L L +F R W
Sbjct: 51 QPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWDG 105
Query: 121 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 180
Y+ VN + ADK++ ++ DD +W+HDYHL+ LRKR ++GFFLH PFP+ EI+
Sbjct: 106 YLRVNALLADKLLPLLQDDD-IIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIF 164
Query: 181 RTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 240
LP D LL L + DL+GF T + FL C S + V+ +S + + +G+
Sbjct: 165 NALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFRT 221
Query: 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 300
++ P+GI ++ P K+A+L+ + K + V+ +D KG+ + LA E L
Sbjct: 222 EVYPIGIEPKEIAKQAAGPLPP-KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEAL 280
Query: 301 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 360
L + P GKI QIA +RG + Q+++ + RIN +G+ G+ P+ ++
Sbjct: 281 LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHF 340
Query: 361 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS 420
+ + ++ LVT +RDGMNL+ EY+ + A +LV+S
Sbjct: 341 DRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP--------------ANPGVLVLS 386
Query: 421 EFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 480
+F G + L+ A+ VNP++ D VA A+D AL +S AE+ RH + + +D+ +W
Sbjct: 387 QFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQEC 446
Query: 481 FLQDLERACRDHMRRRCWGIGFGLGFRVVALDPNFRKLSIDHIVSAY 527
F+ DL++ + F KL+++H +
Sbjct: 447 FISDLKQIVPRSAES-----------QQRDKVATFPKLALEHHHHHH 482
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 570 bits (1472), Expect = 0.0
Identities = 90/507 (17%), Positives = 173/507 (34%), Gaps = 41/507 (8%)
Query: 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDL--- 57
+ + + + +G W + + + ++ + D
Sbjct: 5 IFLASKRAAITYDTDPA-TGEPRA-WLAPGGTGNVVAEQAGVLNISWIASADSEDDRRAS 62
Query: 58 -SEQDEVSQTLLETFKC--VPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLG-GRF 113
D V+ L + P +F + +W +Y G
Sbjct: 63 ALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSFGSD 122
Query: 114 DRSLWQAYVSVNKIFADKVMEVISP-DDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHS 172
R W + + FAD +++ + D VHDY L+ +P LR++ + F+H
Sbjct: 123 AREGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHI 182
Query: 173 PFPSSEIYRTLP--IRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIG 230
P+PS++ +R LP IR +L +L A IGF + R+FL + +L + R +
Sbjct: 183 PWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLP-DARIDREAMT 241
Query: 231 LEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGI 290
+E+ G ++ +P+G L +++ G +++ D K
Sbjct: 242 VEWRGHRTRLRTMPLGYSPLTLDG-----RNPQLPEGIEEWADGHRLVVHSGRTDPIKNA 296
Query: 291 SLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGY 350
+ A +L+ K ++ NP R + V N G
Sbjct: 297 ERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELG---- 350
Query: 351 QPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPS 410
V ID IA + A+ + + DG NL +E + + +
Sbjct: 351 SDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERD------------ 398
Query: 411 TAKSSMLVVSEFVGCSPSLSGAIR-VNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYV 469
+ +++SE G + L R VNP+++ AEA+ +AL ++ +
Sbjct: 399 ----ADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAA 454
Query: 470 STHDVAYWARSFLQDLERACRDHMRRR 496
+ W ++ L L
Sbjct: 455 RPWTLEAWVQAQLDGLAADHAARTATA 481
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 222 bits (567), Expect = 2e-67
Identities = 46/255 (18%), Positives = 94/255 (36%), Gaps = 31/255 (12%)
Query: 534 AILLDYDGTIM--VPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE 591
I LDYDGT++ + + +A ++++ +L + ++V+G+ + ++ +
Sbjct: 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDL--KERFDTYIVTGRSPEEISRFLPLD- 59
Query: 592 GLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVW 651
+ + HG + N + + + + G I K A+++
Sbjct: 60 -INMICYHGACSKINGQIVYNNGSDRFL-GVFDRIYEDTRSWVSDFPGLRIYRKNLAVLY 117
Query: 652 NFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMH 711
+ D +L +E + V G I+E++ GVNKG +
Sbjct: 118 HLGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGE-- 171
Query: 712 QKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTA 771
+ GDD +DE FE A VG+ + AK+++ D
Sbjct: 172 ------RPAIIAGDDATDEAAFEANDDA------------LTIKVGEGETHAKFHVADYI 213
Query: 772 EILRMLLGLAEASAQ 786
E+ ++L + Q
Sbjct: 214 EMRKILKFIEMLGVQ 228
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 78.4 bits (192), Expect = 5e-15
Identities = 101/639 (15%), Positives = 178/639 (27%), Gaps = 191/639 (29%)
Query: 56 DLSEQDEVSQTLLETFKCVPAFI-----------PPELFSK--FYHGFCKQHLWPLFHYM 102
+ E + +L F AF+ P + SK H
Sbjct: 10 ETGEHQYQYKDILSVF--EDAFVDNFDCKDVQDMPKSILSKEEIDH-------------- 53
Query: 103 LPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFN 162
+ +S D R W ++ V EV+ + F+ P+ + + +
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI 113
Query: 163 --RVKLGFFLHSPFPSSEIYRTLPIRDELLRALLN---ADLIGFHTFDYARHFLSCCSRM 217
R +L + + F + R P +L +ALL A + +
Sbjct: 114 EQRDRL-YNDNQVFAKYNVSRLQPY-LKLRQALLELRPAKNVLIDG-------------V 158
Query: 218 LGVSYQSKRGYIGLEYFGRTV-------SIKIL---PVGIH---IGQLQSVLNLPETEAK 264
LG G+T S K+ I + S E
Sbjct: 159 LG--------------SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNS------PETV 198
Query: 265 VAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQ----LLSQNPSKRGKIVLVQIANPA 320
+ LQ QI D I L++ +++ LL P + +VL
Sbjct: 199 LEMLQK-LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL------- 250
Query: 321 RGRGRDVQ--------EVQSETHATVRRINKIFGRPG--YQPVVLIDTPLQFYERIAYYV 370
+VQ + + T R + L + +
Sbjct: 251 ----LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306
Query: 371 IAEC--------------------CLVTA-VRDGMNLI-PYEYIICRQGNEKLDMTL-GL 407
+ + ++ +RDG+ ++++ C + ++ +L L
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366
Query: 408 DPSTAKS--SMLVVSEF---VGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQM-- 460
+P+ + L V F L I W ++ M + +
Sbjct: 367 EPAEYRKMFDRLSV--FPPSAHIPTILLSLI----WFDVIKSDVMVVV--NKLHKYSLVE 418
Query: 461 RHEKHYRYVSTHDVAYWAR---SFLQDLERACRDH---MRRRCWG--------------I 500
+ K S + + L R+ DH + I
Sbjct: 419 KQPKESTI-SIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI 477
Query: 501 GFGL----------GFRVVALDPNFRKLSIDHIVSAYKRTKNRA-ILLD---YDGTIMVP 546
G L FR+V LD F + I H +A+ + + L Y I
Sbjct: 478 GHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI--- 534
Query: 547 GSISTSPNAEAV--AILDNLCRDPKNVVFLVSGKDRDTL 583
P E + AILD L + +N L+ K D L
Sbjct: 535 --CDNDPKYERLVNAILDFLPKIEEN---LICSKYTDLL 568
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 2e-04
Identities = 46/332 (13%), Positives = 80/332 (24%), Gaps = 110/332 (33%)
Query: 462 HEKHYRYVSTHDVAYWARSFLQDLERA-CRDHMRRRCWGIGFGLGFRVV--ALDPNFRKL 518
H H+ T + Y + L E A + + V K
Sbjct: 2 HHHHHMDFETGEHQYQYKDILSVFEDAFVDN------------FDCKDVQDMPKSILSKE 49
Query: 519 SIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVV--FLVS 576
IDHI+ + K + + L L + +V F+
Sbjct: 50 EIDHIIMS-KDAVSGTLRL-----------------------FWTLLSKQEEMVQKFVEE 85
Query: 577 GKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTET 636
+R NY F I TE
Sbjct: 86 V-------------------------LRINY-----------KFLMSPIK-------TEQ 102
Query: 637 TDGSTIETKESALVWNFQYADPDFGSCQA--------KELLDHLESVLANEPVSVKSGPN 688
S + + D + Q + L L ++ N
Sbjct: 103 RQPSMMTRMYI------EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLE----LRPAKN 152
Query: 689 IVEVKPQGVNKGLVAQHQLETMHQKGMLPDFV--LCIGDDRSDEDMFEVIKSAAAGPSLS 746
++ G K VA + + + + L + + S E + E+++ L
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ------KLL 206
Query: 747 PVAEVFACTVGQKPSKAKYYLDDTAEILRMLL 778
+ + S K + LR LL
Sbjct: 207 YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* Length = 262 | Back alignment and structure |
|---|
Score = 55.7 bits (133), Expect = 1e-08
Identities = 34/239 (14%), Positives = 75/239 (31%), Gaps = 38/239 (15%)
Query: 526 AYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAE 585
A +R + L D DGT+ A + L + + + +V G D +AE
Sbjct: 7 AARRKERVLCLFDVDGTLTPARQKIDPEVAAFLQKLRS-----RVQIGVVGGSDYCKIAE 61
Query: 586 WFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKL-----------YT 634
+ + ++ + +S E + L
Sbjct: 62 QLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRL 121
Query: 635 ETTDGSTIETKESALVWNF-----------QYADPDFGSCQAKELLDHLESVLANEPVSV 683
G+ IE + L + ++++ D ++ ++ L++ A + +
Sbjct: 122 PKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRF 181
Query: 684 KS-GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRS----DEDMFEVIK 737
G +V P+G +K + D + G++ S D ++F +
Sbjct: 182 SRGGMISFDVFPEGWDKRYCLDSLDQDS------FDTIHFFGNETSPGGNDFEIFADPR 234
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 Length = 275 | Back alignment and structure |
|---|
Score = 53.5 bits (128), Expect = 9e-08
Identities = 37/225 (16%), Positives = 61/225 (27%), Gaps = 24/225 (10%)
Query: 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNV-VFLVSGKDRDTLAEWFS 588
+ + D DGT++ S P A + L NV V L S K +
Sbjct: 7 QQPLLVFSDLDGTLLDSHSYDWQPAAPWLTRLRE-----ANVPVILCSSKTSAEMLYLQK 61
Query: 589 SC--EGLGIAAEHGYFVRPNYGVDWETCVSVPDF--SWKQIAEPVMKLYTETTDGSTIET 644
+ +GL + AE+G ++ S +I+ + L + T
Sbjct: 62 TLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFD 121
Query: 645 KESALVWNFQYADPDFGSCQA--------------KELLDHLESVLANEPVSVKSGPNIV 690
+ E + + L + G
Sbjct: 122 DVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFW 181
Query: 691 EVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 735
V K A + T Q L +GD +D + EV
Sbjct: 182 HVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEV 226
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 3e-06
Identities = 39/206 (18%), Positives = 76/206 (36%), Gaps = 27/206 (13%)
Query: 533 RAILLDYDGTIMVP-GSISTSPNAEAVAILDNLCRDPKNV-VFLVSGKDRDTLAEWFSSC 590
R +D DG + IST E++ + K + V L+SG +
Sbjct: 6 RLAAIDVDGNLTDRDRLISTK-AIESIRSAEK-----KGLTVSLLSGNVIPVVYALK--- 56
Query: 591 EGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALV 650
LGI +G N G+ ++ S+ F + ++ ++ T +I T
Sbjct: 57 IFLGI---NGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNR---- 109
Query: 651 WNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETM 710
++ A F E +D++ + + + +G +K A + +
Sbjct: 110 --WREASTGF--DIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKA-FA---VNKL 161
Query: 711 HQK-GMLPDFVLCIGDDRSDEDMFEV 735
+ + D +L IGD +D MF++
Sbjct: 162 KEMYSLEYDEILVIGDSNNDMPMFQL 187
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A Length = 271 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 3e-06
Identities = 34/230 (14%), Positives = 76/230 (33%), Gaps = 60/230 (26%)
Query: 510 ALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPK 569
L F +L + A N A++ ++ + E+ ++ L +D
Sbjct: 50 QLISFFPELKDEISFVAE----NGALVYEHGKQLFH----GELTRHESRIVIGELLKDK- 100
Query: 570 NVVFLVSGKDR----DTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQI 625
+ F+ G + E F +A ++ R V D+ ++I
Sbjct: 101 QLNFVACGLQSAYVSENAPEAF-------VALMAKHYHRLKP---------VKDY--QEI 142
Query: 626 AEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKS 685
+ + K ++ + + ++D L L V S
Sbjct: 143 DDVLFKF--------SLNLPDEQI----------------PLVIDKLHVALDGIMKPVTS 178
Query: 686 GPNIVEVKPQGVNKGLVAQHQLETMHQK-GMLPDFVLCIGDDRSDEDMFE 734
G +++ G++K + + ++ + P V+ IGD +D +M +
Sbjct: 179 GFGFIDLIIPGLHKA-NG---ISRLLKRWDLSPQNVVAIGDSGNDAEMLK 224
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} Length = 289 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 3e-05
Identities = 36/228 (15%), Positives = 74/228 (32%), Gaps = 36/228 (15%)
Query: 535 ILLDYDGTIMVPGSISTSPN---AEAVAILDNLCRDPKNVVFLVSGKDR------DTLAE 585
+ D+D T P +I E L+ +D + ++ V+G D +
Sbjct: 25 VFCDFDET-YFPHTIDEQKQQDIYELEDYLEQKSKDGELIIGWVTG--SSIESILDKMGR 81
Query: 586 WFSSCEGLGIAAEHG---YFVRPNYGV----DWETCVSVPDFSWKQIAEPVMKLYTE--T 636
IA++ G + + W + ++ FS +++ + V +L+
Sbjct: 82 GKFRYFPHFIASDLGTEITYFSEHNFGQQDNKWNSRINE-GFSKEKVEKLVKQLHENHNI 140
Query: 637 TDGSTIETKESALVWNFQYADPDFGSCQ---------AKELLDHLESVLANEPVSVKSGP 687
+ +S NF Y + D + + +E + N
Sbjct: 141 LLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDS 200
Query: 688 NIVEVKPQGVNKGLVAQHQLETMHQK-GMLPDFVLCIGDDRSDEDMFE 734
V+ P G K + M +K + + + GD +D M +
Sbjct: 201 YDVDFIPIGTGKN----EIVTFMLEKYNLNTERAIAFGDSGNDVRMLQ 244
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 1e-04
Identities = 40/210 (19%), Positives = 71/210 (33%), Gaps = 33/210 (15%)
Query: 533 RAILLDYDGTIMVP-GSISTSPNAEAVAILDNLCRDPKNV-VFLVSGKDRDTLAEWFSSC 590
+AI +D DGTI P I EA+ ++ + + LV+G
Sbjct: 4 KAISIDIDGTITYPNRMIHEK-ALEAIRRAES-----LGIPIMLVTGNTVQFAEAAS--- 54
Query: 591 EGLGIAAEHGYFVRPNYGV----DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKE 646
+G G V + G ++ D W E + T + + +
Sbjct: 55 ILIGT---SGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRA 111
Query: 647 SALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQ 706
++ +E+++ L N + + VK +NKG
Sbjct: 112 GLVI-----MRETINVETVREIINEL-----NLNLVAVDSGFAIHVKKPWINKG-SG--- 157
Query: 707 LETMHQK-GMLPDFVLCIGDDRSDEDMFEV 735
+E + G+ P V +GD +D D F+V
Sbjct: 158 IEKASEFLGIKPKEVAHVGDGENDLDAFKV 187
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} Length = 279 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 4e-04
Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 11/74 (14%)
Query: 666 KELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKG----LVAQHQLETMHQKGMLPDFVL 721
+++ ++ + V+S P +EV + +KG + G+ D V+
Sbjct: 165 EQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQ-------LGLTADDVM 217
Query: 722 CIGDDRSDEDMFEV 735
+GD +D M +
Sbjct: 218 TLGDQGNDLTMIKY 231
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A Length = 279 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 4e-04
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 666 KELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD 725
+ L L + +S P +E+ PQG++K ++ L + GM + V+ IGD
Sbjct: 165 IPVESELCIRLQGKINVFRSEPYFLELVPQGIDKA-LSLSVL--LENIGMTREEVIAIGD 221
Query: 726 DRSDEDMFEV 735
+D M +
Sbjct: 222 GYNDLSMIKF 231
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 Length = 288 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 5e-04
Identities = 36/232 (15%), Positives = 70/232 (30%), Gaps = 37/232 (15%)
Query: 510 ALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPK 569
+ F L I V + N A++ D +G + +I A IL +
Sbjct: 50 DVMSIFEPLGIKTWVISA----NGAVIHDPEGRLYHHETI---DKKRAYDILS-WLES-E 100
Query: 570 NVVFLVSGKDRDTLAEWFSSCEGLG-IAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEP 628
N + V ++ G + E F N D + + Q
Sbjct: 101 NYYYEVFTGSA-----IYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFA 155
Query: 629 VMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSV-KSGP 687
+ + E E E +N ++L + E +++ S
Sbjct: 156 YINSFQEL-----FEADEPIDFYNILGFSFF-----KEKLEAGWKRYEHAEDLTLVSSAE 205
Query: 688 NIVEVKPQGVNKGL----VAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 735
+ E+ + +KG +A+ + + +GD +D+ M E
Sbjct: 206 HNFELSSRKASKGQALKRLAKQ-------LNIPLEETAAVGDSLNDKSMLEA 250
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 Length = 282 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 5e-04
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 16/81 (19%)
Query: 666 KELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKG----LVAQHQLETMHQKGMLPDFVL 721
+ + + + + +KS P +E+ + VNKG +A G+ P+ ++
Sbjct: 166 DQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADV-------LGIKPEEIM 218
Query: 722 CIGDDRSDEDMFEVIKSAAAG 742
IGD +D M E AG
Sbjct: 219 AIGDQENDIAMIE-----YAG 234
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* Length = 244 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 6e-04
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 655 YADPDFGSCQAKELLDHLESVLAN--EPVSV-KSGPNIVEVKPQGVNKGLVAQHQLETMH 711
+ DP ++D L +L PV V S V++ PQ NKG + + +
Sbjct: 120 HLDPQ----ACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKG----NATQYLQ 171
Query: 712 QK-GMLPDFVLCIGDDRSDEDMFE 734
Q M P L GD +D +FE
Sbjct: 172 QHLAMEPSQTLVCGDSGNDIGLFE 195
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 Length = 301 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 11/74 (14%)
Query: 666 KELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKG----LVAQHQLETMHQKGMLPDFVL 721
K ++ +L+ N+ + EV G +K + +H + D VL
Sbjct: 192 KTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKH-------YNISNDQVL 244
Query: 722 CIGDDRSDEDMFEV 735
+GD +D M
Sbjct: 245 VVGDAENDIAMLSN 258
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 Length = 268 | Back alignment and structure |
|---|
Score = 41.3 bits (98), Expect = 7e-04
Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 11/74 (14%)
Query: 666 KELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKG----LVAQHQLETMHQKGMLPDFVL 721
EL + L + KS P +E+ P+ V+KG + + + ++
Sbjct: 158 DELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRER-------MNWKKEEIV 210
Query: 722 CIGDDRSDEDMFEV 735
GD+ +D MFE
Sbjct: 211 VFGDNENDLFMFEE 224
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} Length = 304 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 8e-04
Identities = 32/227 (14%), Positives = 73/227 (32%), Gaps = 51/227 (22%)
Query: 510 ALDPNFRKLSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPK 569
L +F N A ++ + +++ + +I+ +
Sbjct: 84 QLREHFPDCHEQLTFVGE----NGANIISKNQSLIE----VFQQREDIASIIYFIEEKYP 135
Query: 570 NVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPV 629
V +SG+ + L + S + P + V FS E
Sbjct: 136 QAVIALSGEKKGYLKKGVSE--------NIVKMLSPFF----PVLELVNSFS-PLPDERF 182
Query: 630 MKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS-VKSGPN 688
KL T++ KE +++ + ++ + SG
Sbjct: 183 FKL--------TLQVKEEES----------------AQIMKAIADYKTSQRLVGTASGFG 218
Query: 689 IVEVKPQGVNKGLVAQHQLETMHQK-GMLPDFVLCIGDDRSDEDMFE 734
+++ +G++KG A L+ + ++ D ++ GD +D +M +
Sbjct: 219 YIDIITKGLHKG-WA---LQQLLKRWNFTSDHLMAFGDGGNDIEMLK 261
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 803 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-119 | |
| d1u02a_ | 229 | c.108.1.15 (A:) Trehalose-6-phosphate phosphatase | 6e-30 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-10 | |
| d1s2oa1 | 244 | c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 { | 2e-09 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 5e-07 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 4e-06 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 5e-06 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 5e-06 | |
| d2amya1 | 243 | c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human ( | 8e-06 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 1e-05 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 4e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 5e-04 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 8e-04 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 364 bits (936), Expect = e-119
Identities = 140/487 (28%), Positives = 239/487 (49%), Gaps = 37/487 (7%)
Query: 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQ 60
+++V N++ ++ +GG L + + G + ++ G E + E
Sbjct: 3 LVVVSNRIAPPDEHAA-SAGG---------LAVGIL-GALKAAGGLWFGWSGETGN--ED 49
Query: 61 DEVSQTLLETFKCVPAFIPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQA 120
+ + + + ++Y+ F LWP FHY L L +F R W
Sbjct: 50 QPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWDG 104
Query: 121 YVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 180
Y+ VN + ADK++ ++ DD +W+HDYHL+ LRKR ++GFFLH PFP+ EI+
Sbjct: 105 YLRVNALLADKLLPLLQDDD-IIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIF 163
Query: 181 RTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 240
LP D LL L + DL+GF T + FL C S + V+ +S + + +G+
Sbjct: 164 NALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFRT 220
Query: 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQL 300
++ P+GI ++ P K+A+L+ + K + V+ +D KG+ + LA E L
Sbjct: 221 EVYPIGIEPKEIAKQAAGPLPP-KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEAL 279
Query: 301 LSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPL 360
L + P GKI QIA +RG + Q+++ + RIN +G+ G+ P+ ++
Sbjct: 280 LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHF 339
Query: 361 QFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVS 420
+ + ++ LVT +RDGMNL+ EY+ + A +LV+S
Sbjct: 340 DRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP--------------ANPGVLVLS 385
Query: 421 EFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 480
+F G + L+ A+ VNP++ D VA A+D AL +S AE+ RH + + +D+ +W
Sbjct: 386 QFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQEC 445
Query: 481 FLQDLER 487
F+ DL++
Sbjct: 446 FISDLKQ 452
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 116 bits (291), Expect = 6e-30
Identities = 47/254 (18%), Positives = 92/254 (36%), Gaps = 31/254 (12%)
Query: 535 ILLDYDGTIM--VPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG 592
I LDYDGT++ + + +A ++++ +L + ++V+G+ + ++ +
Sbjct: 3 IFLDYDGTLVPIIMNPEESYADAGLLSLISDLK--ERFDTYIVTGRSPEEISRFLPLDIN 60
Query: 593 LGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWN 652
+ HG G S + + G I K A++++
Sbjct: 61 --MICYHGA-CSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYH 117
Query: 653 FQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQ 712
D +L +E + V G I+E++ GVNKG + +
Sbjct: 118 LGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKG--------SAIR 165
Query: 713 KGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAE 772
+ GDD +DE FE A VG+ + AK+++ D E
Sbjct: 166 SVRGERPAIIAGDDATDEAAFEANDDA------------LTIKVGEGETHAKFHVADYIE 213
Query: 773 ILRMLLGLAEASAQ 786
+ ++L + Q
Sbjct: 214 MRKILKFIEMLGVQ 227
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 60.0 bits (144), Expect = 1e-10
Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 21/209 (10%)
Query: 533 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG 592
R +D DG + + ++ E++ V L+SG + ++
Sbjct: 4 RLAAIDVDGNLTDRDRLISTKAIESIR----SAEKKGLTVSLLSGN---VIPVVYALKIF 56
Query: 593 LGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWN 652
LGI +G N G+ ++ S+ F + ++ ++ T +I
Sbjct: 57 LGI---NGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSI--------LT 105
Query: 653 FQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQ 712
++ + G E +D++ + + + +G +K +
Sbjct: 106 NRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKA---FAVNKLKEM 162
Query: 713 KGMLPDFVLCIGDDRSDEDMFEVIKSAAA 741
+ D +L IGD +D MF++ A
Sbjct: 163 YSLEYDEILVIGDSNNDMPMFQLPVRKAC 191
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Score = 56.6 bits (135), Expect = 2e-09
Identities = 32/208 (15%), Positives = 61/208 (29%), Gaps = 16/208 (7%)
Query: 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDT---LAEWF 587
+ ++ D D T + G + + R + +G+ + L +
Sbjct: 2 RQLLLISDLDNTWV--GDQQALEHLQEYLGD----RRGNFYLAYATGRSYHSARELQKQV 55
Query: 588 SSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKES 647
E G + G+D + + + I + + + S +E
Sbjct: 56 GLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPW 115
Query: 648 ALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQL 707
+ ++ Q E+L + S V++ PQ NKG
Sbjct: 116 KISYHLDPQACPTVIDQLTEMLKETG----IPVQVIFSSGKDVDLLPQRSNKG---NATQ 168
Query: 708 ETMHQKGMLPDFVLCIGDDRSDEDMFEV 735
M P L GD +D +FE
Sbjct: 169 YLQQHLAMEPSQTLVCGDSGNDIGLFET 196
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 49.2 bits (116), Expect = 5e-07
Identities = 37/211 (17%), Positives = 63/211 (29%), Gaps = 19/211 (9%)
Query: 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590
K +AI +D DGTI P + EA+ + LV+G
Sbjct: 1 KIKAISIDIDGTITYPNRMIHEKALEAIR----RAESLGIPIMLVTGNTVQFAEAASILI 56
Query: 591 EGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALV 650
G + + + + K + T+ + + LV
Sbjct: 57 ---GTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLV 113
Query: 651 WNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETM 710
+ + + EL N + + VK +NKG +
Sbjct: 114 IMRETINVETVREIINEL---------NLNLVAVDSGFAIHVKKPWINKG---SGIEKAS 161
Query: 711 HQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 741
G+ P V +GD +D D F+V+ A
Sbjct: 162 EFLGIKPKEVAHVGDGENDLDAFKVVGYKVA 192
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 47.3 bits (111), Expect = 4e-06
Identities = 44/240 (18%), Positives = 74/240 (30%), Gaps = 38/240 (15%)
Query: 533 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKD----RDTLAEWFS 588
+ I +D DGT+++P + A+A R V L +G+ + L E
Sbjct: 5 KLIAIDMDGTLLLPDHTISPAVKNAIAAA----RARGVNVVLTTGRPYAGVHNYLKELHM 60
Query: 589 SCEGLGIAAEHG------------YFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTET 636
G +G +Y + A LYT
Sbjct: 61 EQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTAN 120
Query: 637 TDGSTIETKESAL------VWNFQYADPDF---------GSCQAKELLDHLESVLANEPV 681
D S ES + + DP+ + + + + +
Sbjct: 121 RDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYT 180
Query: 682 SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 741
+KS P +E+ + VNKG G+ P+ ++ IGD +D M E A
Sbjct: 181 VLKSAPYFLEILDKRVNKG---TGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVA 237
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 46.5 bits (109), Expect = 5e-06
Identities = 33/234 (14%), Positives = 64/234 (27%), Gaps = 31/234 (13%)
Query: 533 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEG 592
+ I+ D DGT + P A + + SG L +F +
Sbjct: 3 KVIVTDMDGTFLNDAKTYNQPRFMAQY---QELKKRGIKFVVASGNQYYQLISFFPELKD 59
Query: 593 LGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQ------------IAEPVMKLYTETTDGS 640
+ +G S +A + Y
Sbjct: 60 EISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPE 119
Query: 641 TIETKESALVWNFQYADP-------------DFGSCQAKELLDHLESVLANEPVSVKSGP 687
+ + + Q ++D L L V SG
Sbjct: 120 AFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGF 179
Query: 688 NIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 741
+++ G++K A + + + P V+ IGD +D +M ++ + + A
Sbjct: 180 GFIDLIIPGLHK---ANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA 230
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 46.2 bits (108), Expect = 5e-06
Identities = 33/219 (15%), Positives = 57/219 (26%), Gaps = 22/219 (10%)
Query: 535 ILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS------ 588
+ D DGT++ S P A + L R+ V L S K +
Sbjct: 7 VFSDLDGTLLDSHSYDWQPAAPWLTRL----REANVPVILCSSKTSAEMLYLQKTLGLQG 62
Query: 589 ----SCEGLGIAAEHGYFVRPNYGV--------DWETCVSVPDFSWKQIAEPVMKLYTET 636
+ G I + + + ++ + T
Sbjct: 63 LPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDDAT 122
Query: 637 TDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQG 696
T ++ A + A + E + + L + G V
Sbjct: 123 IAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDAS 182
Query: 697 VNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 735
K A + T Q L +GD +D + EV
Sbjct: 183 AGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEV 221
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.8 bits (107), Expect = 8e-06
Identities = 32/230 (13%), Positives = 61/230 (26%), Gaps = 36/230 (15%)
Query: 533 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS---- 588
L D DGT+ P T + + L K + +V G D + + E
Sbjct: 4 ALCLFDVDGTLTAPRQKITKEMDDFLQKLRQ-----KIKIGVVGGSDFEKVQEQLGNDVV 58
Query: 589 -----SCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIE 643
G+ A + + ++ + K+ G+ IE
Sbjct: 59 EKYDYVFPENGLVAYKDGKLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIE 118
Query: 644 TKESALVWNFQYADPDFGSCQAK-----------ELLDHLESVLANEPVSVK-SGPNIVE 691
+ L + + + L A + ++ G +
Sbjct: 119 FRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQISFD 178
Query: 692 VKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRS----DEDMFEVIK 737
V P G +K +H + GD D ++F +
Sbjct: 179 VFPDGWDKRYCLRHVE------NDGYKTIYFFGDKTMPGGNDHEIFTDPR 222
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 45.4 bits (106), Expect = 1e-05
Identities = 43/300 (14%), Positives = 84/300 (28%), Gaps = 66/300 (22%)
Query: 526 AYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAE 585
A K + +L+D+DGT+ V I E + + + +V + +G+ + +
Sbjct: 4 ALKGADIKLLLIDFDGTLFVDKDIKVPS--ENIDAIKEA-IEKGYMVSICTGRSKVGILS 60
Query: 586 WFSSCEGLGIAAEHGYFVRPNYGV------------------------------------ 609
F + V N +
Sbjct: 61 AFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELISYLVEKNLVNQTI 120
Query: 610 --DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKE 667
E+ D + + + K + DP ++K
Sbjct: 121 FHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPS----ESKT 176
Query: 668 LLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDR 727
++ +L+ N+ + EV G +K + L+ + + D VL +GD
Sbjct: 177 VIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYN---ISNDQVLVVGDAE 233
Query: 728 SDEDMFE-VIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDT------AEILRMLLGL 780
+D M S A + AK L + A +L+ + L
Sbjct: 234 NDIAMLSNFKYSFAVANATDSAKSH-----------AKCVLPVSHREGAVAYLLKKVFDL 282
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 40.7 bits (94), Expect = 4e-04
Identities = 38/236 (16%), Positives = 70/236 (29%), Gaps = 35/236 (14%)
Query: 533 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC-- 590
R + D DGT++ + + + L K V SG+ +
Sbjct: 3 RVFVFDLDGTLLNDNLEISEKDRRNIEKLSR-----KCYVVFASGRMLVSTLNVEKKYFK 57
Query: 591 EGLGIAAEHGYFV-------RPNYGVDWETCVSVPDFSWKQIAEPVM----KLYTETTDG 639
A +G V N + E + ++ LY+E +
Sbjct: 58 RTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNE 117
Query: 640 STIETKESA-----LVWNFQYADPDFGSC---------QAKELLDHLESVLANEPVSVKS 685
+ + N G+ + EL + L + KS
Sbjct: 118 EIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKS 177
Query: 686 GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAA 741
P +E+ P+ V+KG + + + ++ GD+ +D MFE A
Sbjct: 178 FPTYLEIVPKNVDKGKALRFL---RERMNWKKEEIVVFGDNENDLFMFEEAGLRVA 230
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 40.3 bits (93), Expect = 5e-04
Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 38/229 (16%)
Query: 533 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDR---DTLAEWFSS 589
+A+ D DGT++ + + L+ +F+ +G+ + + L+E
Sbjct: 2 KALFFDIDGTLVSFETHRIPS--STIEALEAA-HAKGLKIFIATGRPKAIINNLSELQDR 58
Query: 590 CEGLGIAAEHGYFVRPNYGVDWETCVSVPD----------------------FSWKQIAE 627
G +G + V +++ + + S Q E
Sbjct: 59 NLIDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNE 118
Query: 628 PVMKLYTETTDGSTIETK--ESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKS 685
V K++ + + I T E A P + KE+L + + +
Sbjct: 119 MVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPTC-----EIGRW 173
Query: 686 GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFE 734
P +V +G K + + + + GD +D M
Sbjct: 174 YPAFADVTAKGDTKQKGIDEIIRHFG---IKLEETMSFGDGGNDISMLR 219
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 39.7 bits (91), Expect = 8e-04
Identities = 36/221 (16%), Positives = 53/221 (23%), Gaps = 27/221 (12%)
Query: 533 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWF----- 587
R I LD D T++ P + L +D + S K R +
Sbjct: 3 RLIFLDIDKTLI--PGYEPDPAKPIIEEL----KDMGFEIIFNSSKTRAEQEYYRKELEV 56
Query: 588 ----SSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIE 643
S G I GYF G + + + + +K
Sbjct: 57 ETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYG 116
Query: 644 TKESALVWNFQYADPDFGSCQAKELLD---------HLESVLANEPVSVKSGPNIVEVKP 694
+ F P+ + E VL V G V
Sbjct: 117 NSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTVHG 176
Query: 695 QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEV 735
K + +GD +D MFEV
Sbjct: 177 NSDKGKAAKILL---DFYKRLGQIESYAVGDSYNDFPMFEV 214
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 803 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 100.0 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.97 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.97 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.97 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.97 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.97 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.97 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.96 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.96 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.95 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.95 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.93 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.93 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.92 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.91 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.91 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.9 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.88 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.74 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.41 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.22 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.21 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.18 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.17 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.16 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.01 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 98.88 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 98.84 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 98.83 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.81 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 98.79 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 98.75 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 98.6 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 98.56 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 98.56 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 98.56 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 98.53 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 98.49 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 98.38 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 98.38 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 98.35 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 98.32 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 98.31 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 98.11 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 97.93 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.87 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 97.86 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 97.76 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 97.59 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.55 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.25 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 97.24 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.21 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 95.29 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 95.12 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.06 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 94.45 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 94.26 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 92.95 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 92.58 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 92.47 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 91.69 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 90.89 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 88.96 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 88.88 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 87.96 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 87.68 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 87.32 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 84.08 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 83.43 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 82.57 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 80.27 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=0 Score=778.74 Aligned_cols=451 Identities=30% Similarity=0.566 Sum_probs=414.8
Q ss_pred CEEEECCCCCCEEECCCCCCCEEEEECCCCCHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCH
Q ss_conf 99998268520276799988849983898417864201378996289950497579033567789441383199963792
Q 003682 1 MIIVGNQLPLRAHRSSDGSGGWTFSWDEDSLLLQLKDGLGEDVEVIYVGCIKEQIDLSEQDEVSQTLLETFKCVPAFIPP 80 (803)
Q Consensus 1 ~ivvs~rlP~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~ 80 (803)
|||||||+|+...+ ..++|||+++|.+.+. +.+++||||+|...++.+. .......+++|.||++++
T Consensus 3 livvsnr~~~~~~~----------~~~~gGl~~al~~~~~-~~~g~Wvgw~g~~~~~~~~--~~~~~~~~~~~~~v~l~~ 69 (456)
T d1uqta_ 3 LVVVSNRIAPPDEH----------AASAGGLAVGILGALK-AAGGLWFGWSGETGNEDQP--LKKVKKGNITWASFNLSE 69 (456)
T ss_dssp EEEEEEECCCCC--------------CCCHHHHHHHHHHH-HHCEEEEEEEEEESCCSSC--CEEEEETTEEEEEEEECH
T ss_pred EEEEECCCCCCCCC----------CCCCCCHHHHHHHHHH-HCCCEEEECCCCCCCCCCH--HHHHHCCCCEEEEECCCH
T ss_conf 89997999978887----------7899618997299995-1797899669988766423--455540585169956999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 54543521012346455544578899998886587749999999999999998651999996898386433158999850
Q 003682 81 ELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKR 160 (803)
Q Consensus 81 ~~~~~~y~~~~~~~lwp~~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~~~~~d~vwihDyhl~llp~~lr~~ 160 (803)
++++.||+||||++|||+|||+.+. .+|++++|++|++||+.||+++.+.+++ +|+||||||||+++|.+||++
T Consensus 70 ~~~~~~Y~gf~n~~LWpl~H~~~~~-----~~~~~~~~~~Y~~vN~~fA~~l~~~~~~-~d~iwvhDyhl~llp~~lR~~ 143 (456)
T d1uqta_ 70 QDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRKR 143 (456)
T ss_dssp HHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHCCC-CCEEEEECCCHHHHHHHHHHH
T ss_conf 9999999871544262101576665-----4403788888999999999999872568-986999545255569999985
Q ss_pred CCCCEEEEEEECCCCCHHHHHCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCEECCCCCEEEEEECCEEEEE
Q ss_conf 79972998970679993654029880899999760998801597669989999998719602256760149986939999
Q 003682 161 FNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSI 240 (803)
Q Consensus 161 ~~~~~i~~f~H~pfP~~~~~~~lp~~~~ll~~ll~~dligf~~~~~~~~Fl~~~~~~lg~~~~~~~~~~~~~~~g~~~~i 240 (803)
.|+++|+||+|+|||++++|+++|++++|+++|+++|+||||+++|++||+.+|.++++....... .+.+.|+.+++
T Consensus 144 ~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~---~i~~~gr~v~v 220 (456)
T d1uqta_ 144 GVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK---SHTAWGKAFRT 220 (456)
T ss_dssp TCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTT---EEEETTEEEEE
T ss_pred CCCCCEEEEECCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC---EEEECCCEEEE
T ss_conf 899858999689999857755485069999776322620035899999999999997386112687---29956815530
Q ss_pred EEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
Q ss_conf 68225579168997709943899999999981897799941474323488899999999998199998957899993289
Q 003682 241 KILPVGIHIGQLQSVLNLPETEAKVAELQDQFKGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPA 320 (803)
Q Consensus 241 ~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~iil~v~Rl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~li~i~~~~ 320 (803)
.++|+|||++.|......+ ..+...+++..++++++|++|||+++.||+..+|+||++|++++|+++++++|+|++.|+
T Consensus 221 ~~~p~GID~~~~~~~~~~~-~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~ 299 (456)
T d1uqta_ 221 EVYPIGIEPKEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTS 299 (456)
T ss_dssp EECCCCCCHHHHHHHHHSC-CCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBC
T ss_pred EEECCCCCCHHHHHHCCCH-HHHHHHHHHHHCCCCEEEEEECCCCHHHCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
T ss_conf 1206765626654311407-799999977752898599993787432065899999999987584314618999974875
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 99914699999999999999860219999510899618999989999998543230035566788883113452138853
Q 003682 321 RGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEK 400 (803)
Q Consensus 321 ~~~~~~~~~l~~~i~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~adv~v~tS~~Eg~~Lv~~Ea~a~~~~~~~ 400 (803)
+++.+++.++..++.+++++||+++++.+|.|++++.+.++++++.++|+.||++++||++||||||++|||+|+.+.
T Consensus 300 ~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~-- 377 (456)
T d1uqta_ 300 RGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPA-- 377 (456)
T ss_dssp STTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTT--
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCEEECCCCCCCCCCHHHHHHHHCCCC--
T ss_conf 345688999999999999998765212798750211587678887677753054525876578883999999908988--
Q ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 22224899999998608962442431238898052899989999999999379999999999986020022797799999
Q 003682 401 LDMTLGLDPSTAKSSMLVVSEFVGCSPSLSGAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARS 480 (803)
Q Consensus 401 ~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~ 480 (803)
++|++|+|+++|+++++.+|++|||+|++++|++|.++|+|+++||+.|+++++++|.+|+++.|+++
T Consensus 378 ------------~~g~lIlS~~~G~~~~l~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~ 445 (456)
T d1uqta_ 378 ------------NPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQEC 445 (456)
T ss_dssp ------------SCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred ------------CCCCEEEECCCCCHHHHCCEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf ------------89758972897877885976998959999999999999749999999999999899997899999999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q 003682 481 FLQDLERA 488 (803)
Q Consensus 481 ~l~~l~~~ 488 (803)
||.+|+++
T Consensus 446 fl~~l~~~ 453 (456)
T d1uqta_ 446 FISDLKQI 453 (456)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHH
T ss_conf 99998755
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=1.4e-32 Score=218.58 Aligned_cols=224 Identities=21% Similarity=0.300 Sum_probs=178.3
Q ss_pred EEEEEECCCCCCCCCC--CCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEECCCEEEEECCCEE
Q ss_conf 5999943886789999--99999989999999973189983999958996549998622789717811858999389422
Q 003682 533 RAILLDYDGTIMVPGS--ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVD 610 (803)
Q Consensus 533 klii~DlDGTL~~~~~--~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~~l~liaenG~~i~~~~~~~ 610 (803)
.||+||+||||++..+ ....+++++.++|++| ++ ++.|+|+|||+...++..+. +..+++++||+.+..++...
T Consensus 1 ~Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l-~~-~~~v~i~TGR~~~~l~~~~~--~~~~~~~~ng~~~~~~~~~~ 76 (229)
T d1u02a_ 1 SLIFLDYDGTLVPIIMNPEESYADAGLLSLISDL-KE-RFDTYIVTGRSPEEISRFLP--LDINMICYHGACSKINGQIV 76 (229)
T ss_dssp CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHH-HH-HSEEEEECSSCHHHHHHHSC--SSCEEEEGGGTEEEETTEEE
T ss_pred CEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHH-HH-CCCEEEECCCCHHHHHHHCC--CCCCEEECCEEEEECCCCEE
T ss_conf 9899995577789978965488999999999998-50-99789996998799664347--66628964708983499346
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCEEE
Q ss_conf 78606888801899999999998405997258413432897410479761134499999999998618990998879099
Q 003682 611 WETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIV 690 (803)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~il~~~~~~~~gs~ie~k~~~~~~~~~~~d~~~~~~~a~~l~~~l~~~l~~~~~~v~~g~~~i 690 (803)
+.. .......+.+.+...+..+....++.+...+.....+++....... ..+..+.+.+.+....+.+.++..++
T Consensus 77 ~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~i 151 (229)
T d1u02a_ 77 YNN-GSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADM----KPKLRSRIEEIARIFGVETYYGKMII 151 (229)
T ss_dssp ECT-TGGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCSTT----HHHHHHHHHHHHHHHTCEEEECSSEE
T ss_pred EEC-CHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEHHHHHHH----HHHHHHHHHHHHHCCCEEEEEECEEE
T ss_conf 623-3054499999999986776506677210355421342203332445----79999999998523876999602189
Q ss_pred EEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCCCCCCEEEECCH
Q ss_conf 99939999999999999975447999462999909900399999802402899999985058999279886240680997
Q 003682 691 EVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDT 770 (803)
Q Consensus 691 ev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~~s~A~~~i~~~ 770 (803)
||.|+|+|||.|+++++++ +++++||||.||++||+.++.+ |+|++|+++++|+|+++++
T Consensus 152 di~p~g~~Kg~al~~l~~~--------~~~i~~GDs~ND~~Mf~~~~~~------------~av~~g~~~~~A~~~~~~~ 211 (229)
T d1u02a_ 152 ELRVPGVNKGSAIRSVRGE--------RPAIIAGDDATDEAAFEANDDA------------LTIKVGEGETHAKFHVADY 211 (229)
T ss_dssp EEECTTCCHHHHHHHHHTT--------SCEEEEESSHHHHHHHHTTTTS------------EEEEESSSCCCCSEEESSH
T ss_pred EEECCCCCHHHHHHHHHCC--------CCCEEECCCCCHHHHHHCCCCE------------EEEEECCCCCCCEEECCCH
T ss_conf 9736989889999997440--------4456643888709999602882------------8999689876672875999
Q ss_pred HHHHHHHHHHHHHHC
Q ss_conf 599999999897302
Q 003682 771 AEILRMLLGLAEASA 785 (803)
Q Consensus 771 ~ev~~~L~~l~~~~~ 785 (803)
+||.++|+.|.....
T Consensus 212 ~ev~~~l~~l~~~~~ 226 (229)
T d1u02a_ 212 IEMRKILKFIEMLGV 226 (229)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999986
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=4.7e-30 Score=202.87 Aligned_cols=227 Identities=19% Similarity=0.263 Sum_probs=161.5
Q ss_pred CEEEEEECCCCCCCCCCCCCCC-CHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC-CCCEEECCCEEEEECCCE
Q ss_conf 9599994388678999999999-98999999997318998399995899654999862278-971781185899938942
Q 003682 532 NRAILLDYDGTIMVPGSISTSP-NAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGV 609 (803)
Q Consensus 532 ~klii~DlDGTL~~~~~~~~~i-~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~-~l~liaenG~~i~~~~~~ 609 (803)
+|+|+||+||||++ ....+ ++.+.++|++| ++.|+.++++|||+...+.+.+..+. ..+++++||+.+..++..
T Consensus 2 IKli~~DlDGTLl~---~~~~~~~~~~~~~l~~l-~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (269)
T d1rlma_ 2 VKVIVTDMDGTFLN---DAKTYNQPRFMAQYQEL-KKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQ 77 (269)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHH-HHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEE
T ss_pred EEEEEEECCCCCCC---CCCCCCHHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECEEEEEECCCE
T ss_conf 79999947756727---99839969999999999-978998999959998999999998286662674121699989908
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCC---------CCCEEEECCC--------------EEEEEECCCCCC-------
Q ss_conf 2786068888018999999999984059---------9725841343--------------289741047976-------
Q 003682 610 DWETCVSVPDFSWKQIAEPVMKLYTETT---------DGSTIETKES--------------ALVWNFQYADPD------- 659 (803)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~il~~~~~~~---------~gs~ie~k~~--------------~~~~~~~~~d~~------- 659 (803)
.+..... .......+..+.+.. ++.++..... .....+...+..
T Consensus 78 ~~~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (269)
T d1rlma_ 78 LFHGELT------RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLN 151 (269)
T ss_dssp EEECCCC------HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEE
T ss_pred EEEECCC------HHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHCCHHEEEEEC
T ss_conf 9973266------5888999999986248429998157368846881889999875234552025376622102477750
Q ss_pred CCHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHH
Q ss_conf 11344999999999986189909988790999993999999999999997544799946299990990039999980240
Q 003682 660 FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 660 ~~~~~a~~l~~~l~~~l~~~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~ 739 (803)
....+...+.+.+...+......+.++..++||.|+++|||.|+++|++++ |++++++++||||.||++||+.++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~l---gi~~~~vi~~GD~~ND~~Ml~~ag~- 227 (269)
T d1rlma_ 152 LPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRW---DLSPQNVVAIGDSGNDAEMLKMARY- 227 (269)
T ss_dssp CCGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHCSE-
T ss_pred CCHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEECCCHHHHHHHHHHHHHH---CCCCCCEEEECCCCCHHHHHHHCCE-
T ss_conf 888999999999999851533899975826888458657778888776650---2142418999088441999985891-
Q ss_pred CCCCCCCCCCCEEEEEECCC----CCCCEEEECC--HHHHHHHHHHHHHHHC
Q ss_conf 28999999850589992798----8624068099--7599999999897302
Q 003682 740 AAGPSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRMLLGLAEASA 785 (803)
Q Consensus 740 ~a~~~~~~~~~~~~V~vG~~----~s~A~~~i~~--~~ev~~~L~~l~~~~~ 785 (803)
+|+|+++ +..|+|++.+ .++|+..|+++.+...
T Consensus 228 -------------~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~~~~ 266 (269)
T d1rlma_ 228 -------------SFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTY 266 (269)
T ss_dssp -------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHTCT
T ss_pred -------------EEEECCCCHHHHHHCCEECCCCCCCHHHHHHHHHHHCCC
T ss_conf -------------899589989999847888188984599999999981679
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.97 E-value=8.9e-30 Score=201.14 Aligned_cols=318 Identities=14% Similarity=0.149 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHC---CCCCCEEEEECCCCCCHHHHHHH-HCCCCEEEEEEECCCC----CHHHHHCCC---
Q ss_conf 749999999999999998651---99999689838643315899985-0799729989706799----936540298---
Q 003682 116 SLWQAYVSVNKIFADKVMEVI---SPDDDFVWVHDYHLMVLPTFLRK-RFNRVKLGFFLHSPFP----SSEIYRTLP--- 184 (803)
Q Consensus 116 ~~w~~Y~~vN~~fa~~i~~~~---~~~~d~vwihDyhl~llp~~lr~-~~~~~~i~~f~H~pfP----~~~~~~~lp--- 184 (803)
+.|..|...++.+++.+.+.. +| |+|++||.|..+.+.+++. +.+++|+.+++|.... ....+..+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~p--DIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~ 183 (477)
T d1rzua_ 106 DNWKRFAALSLAAARIGAGVLPGWRP--DMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPA 183 (477)
T ss_dssp THHHHHHHHHHHHHHHHTTCSSSCCC--SEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCG
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCC--CEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCH
T ss_conf 21889999998877665302568888--8799336067788999998547898889998324423467888998862114
Q ss_pred ------------CCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCEECCCCCEEEEEECCEEEEEEEECCCCCHHHH
Q ss_conf ------------80899999760998801597669989999998719602256760149986939999682255791689
Q 003682 185 ------------IRDELLRALLNADLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQL 252 (803)
Q Consensus 185 ------------~~~~ll~~ll~~dligf~~~~~~~~Fl~~~~~~lg~~~~~~~~~~~~~~~g~~~~i~v~p~GId~~~~ 252 (803)
....+..++..+|.+-..+..+++..+..-... +.... ...+..++.++|+|+|.+.|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~~vi~ngv~~~~~ 253 (477)
T d1rzua_ 184 HAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGM-GLEGV---------IGSRAHVLHGIVNGIDADVW 253 (477)
T ss_dssp GGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHT-TCHHH---------HHTTGGGEEECCCCBCTTTS
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC-CHHHH---------HHHCCCCEEEEECCCCHHHC
T ss_conf 440654434320568999887764442131199999999875475-36656---------66515647999789340120
Q ss_pred HHHHCC-----------CHHHHHHHHHHHHH----CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEE
Q ss_conf 977099-----------43899999999981----897799941474323488899999999998199998957899993
Q 003682 253 QSVLNL-----------PETEAKVAELQDQF----KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIA 317 (803)
Q Consensus 253 ~~~~~~-----------~~~~~~~~~l~~~~----~~~~iil~v~Rl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~li~i~ 317 (803)
.+.... .......+.++... .++++|+++||+++.||+..+++|++.+++.++ .++++|
T Consensus 254 ~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~------~l~~~G 327 (477)
T d1rzua_ 254 NPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGG------RLVVLG 327 (477)
T ss_dssp CTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTC------EEEEEE
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCC------EEEEEE
T ss_conf 56645333333104567776663899887414466786389998500215883799999998786598------399993
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEECC
Q ss_conf 28999914699999999999999860219999510899618999989999998543230035566788883113452138
Q 003682 318 NPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQG 397 (803)
Q Consensus 318 ~~~~~~~~~~~~l~~~i~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~adv~v~tS~~Eg~~Lv~~Ea~a~~~~ 397 (803)
.+ +.. ...++.++..+... .+. +.+..+.+++..+|+.||+||+||.+||||+|++|||+|
T Consensus 328 ~G---~~~----~~~~~~~~~~~~~~--------~v~-~~~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~--- 388 (477)
T d1rzua_ 328 AG---DVA----LEGALLAAASRHHG--------RVG-VAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY--- 388 (477)
T ss_dssp CB---CHH----HHHHHHHHHHHTTT--------TEE-EEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH---
T ss_pred CC---CCH----HHHHHHHHHHHCCC--------EEE-EECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHC---
T ss_conf 67---745----77899998763587--------278-971547057999998385134886535788899999983---
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC------------CCCEECCCCHHHHHHHHHHHHCC--CHHHHHHHHH
Q ss_conf 853222248999999986089624424312388------------98052899989999999999379--9999999999
Q 003682 398 NEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS------------GAIRVNPWNIDAVAEAMDSALGV--SDAEKQMRHE 463 (803)
Q Consensus 398 ~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~------------~~~lvnP~d~~~~a~ai~~aL~~--~~~er~~r~~ 463 (803)
|.|+|+|+.+|..+.+. .|++|+|.|++++|++|.++|+. .++.+..+.+
T Consensus 389 ----------------G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~ 452 (477)
T d1rzua_ 389 ----------------GCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQK 452 (477)
T ss_dssp ----------------TCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred ----------------CCCEEECCCCCCCCEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf ----------------9989990799974055248755334678744896999999999999999860079999999999
Q ss_pred HHHCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 8602002279779999999999999
Q 003682 464 KHYRYVSTHDVAYWARSFLQDLERA 488 (803)
Q Consensus 464 ~~~~~v~~~~~~~W~~~~l~~l~~~ 488 (803)
+.. -+.++|+.-++++++.++++
T Consensus 453 ~a~--~~~fsw~~~a~~~~~lY~~l 475 (477)
T d1rzua_ 453 LGM--KSDVSWEKSAGLYAALYSQL 475 (477)
T ss_dssp HHH--TCCCBHHHHHHHHHHHHHHH
T ss_pred HHH--HHHCCHHHHHHHHHHHHHHH
T ss_conf 999--85189999999999999998
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=5.4e-30 Score=202.49 Aligned_cols=230 Identities=16% Similarity=0.217 Sum_probs=153.6
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCC----CCCCEEECCCEEEEE
Q ss_conf 5995999943886789999999999899999999731899839999589965499986227----897178118589993
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC----EGLGIAAEHGYFVRP 605 (803)
Q Consensus 530 ~~~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~----~~l~liaenG~~i~~ 605 (803)
|.+|+|+||+||||++ .++.+++++.++|++| ++.|+.++++|||+...+.+.+..+ +..+++++||+.+..
T Consensus 2 ~~iKli~~DlDGTL~~---~~~~i~~~~~~al~~L-~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~ 77 (271)
T d1rkqa_ 2 LAIKLIAIDMDGTLLL---PDHTISPAVKNAIAAA-RARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQK 77 (271)
T ss_dssp CCCCEEEECCCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEE
T ss_pred CCEEEEEEECCCCCCC---CCCCCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEECCCEEEEC
T ss_conf 8706999957766438---9795199999999999-97899999998999899999999846768985899868516750
Q ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHHC----C-CCCEEEECCC-------------EEEEE-ECCCCC--CC----
Q ss_conf 8942278606888801899999999998405----9-9725841343-------------28974-104797--61----
Q 003682 606 NYGVDWETCVSVPDFSWKQIAEPVMKLYTET----T-DGSTIETKES-------------ALVWN-FQYADP--DF---- 660 (803)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~----~-~gs~ie~k~~-------------~~~~~-~~~~d~--~~---- 660 (803)
.......... .........+.......... . ...+...... ...+. ....++ ..
T Consensus 78 ~~~~~~i~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (271)
T d1rkqa_ 78 AADGSTVAQT-ALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVM 156 (271)
T ss_dssp TTTCCEEEEC-CBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEE
T ss_pred CCCCEEEEEE-CCCHHHHHHHHHHHHHHCCEEEEEECCEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEE
T ss_conf 6777089850-200778888788888616407887313277405661167777776405761003165507655458999
Q ss_pred ---CHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCC
Q ss_conf ---13449999999999861899099887909999939999999999999975447999462999909900399999802
Q 003682 661 ---GSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIK 737 (803)
Q Consensus 661 ---~~~~a~~l~~~l~~~l~~~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~ 737 (803)
......+..+.+.+.+.+....+..+..++||.|+++|||.|++++++++ +++.+++++|||+.||++||+.++
T Consensus 157 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~---~i~~~~ii~~GD~~ND~~ml~~~~ 233 (271)
T d1rkqa_ 157 MIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVL---GIKPEEIMAIGDQENDIAMIEYAG 233 (271)
T ss_dssp EECCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSS
T ss_pred EECCHHHHHHHHHHHHHHHHCCEEEEEECCCEEEECCCCCCCCCCCCEEHHHC---CCCHHCEEEEECCHHHHHHHHHCC
T ss_conf 94677789999999999850563899954726885278887654200001100---114201799918676799998589
Q ss_pred HHCCCCCCCCCCCEEEEEECCC----CCCCEEEECC--HHHHHHHHHHHH
Q ss_conf 4028999999850589992798----8624068099--759999999989
Q 003682 738 SAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRMLLGLA 781 (803)
Q Consensus 738 ~~~a~~~~~~~~~~~~V~vG~~----~s~A~~~i~~--~~ev~~~L~~l~ 781 (803)
.+ ++|+++ +..|++++.+ .+++++.|+++.
T Consensus 234 ~~--------------~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~~ 269 (271)
T d1rkqa_ 234 VG--------------VAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYV 269 (271)
T ss_dssp EE--------------EECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred CE--------------EEECCCCHHHHHHCCEECCCCCCCHHHHHHHHHH
T ss_conf 18--------------9967987999985898838898583999999984
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.97 E-value=2.4e-29 Score=198.48 Aligned_cols=225 Identities=16% Similarity=0.122 Sum_probs=157.8
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCC--CCCCEEECCCEEEEECCC
Q ss_conf 995999943886789999999999899999999731899839999589965499986227--897178118589993894
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC--EGLGIAAEHGYFVRPNYG 608 (803)
Q Consensus 531 ~~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~--~~l~liaenG~~i~~~~~ 608 (803)
|+|+|+||+||||++ .+..+++++.++|++| ++ +..++++|||+...+.+.+... ...+++++||+.+..+++
T Consensus 1 m~Kli~~DlDGTL~~---~~~~i~~~~~~al~~l-~~-~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~ 75 (267)
T d1nf2a_ 1 MYRVFVFDLDGTLLN---DNLEISEKDRRNIEKL-SR-KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEE 75 (267)
T ss_dssp CBCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-TT-TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTT
T ss_pred CEEEEEEECCCCCCC---CCCCCCHHHHHHHHHH-HC-CCEEEEECCCCHHHHHHHHHHHCCCCCCEECCCCEEEEECCC
T ss_conf 949999917756548---9594499999999999-74-997999899985888999998465677311369828995466
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEE--------ECCC------CCC---------------
Q ss_conf 22786068888018999999999984059972584134328974--------1047------976---------------
Q 003682 609 VDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWN--------FQYA------DPD--------------- 659 (803)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~il~~~~~~~~gs~ie~k~~~~~~~--------~~~~------d~~--------------- 659 (803)
...... .... +.+..+.+...+..........+...... .+.. .+.
T Consensus 76 ~~i~~~--~i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 150 (267)
T d1nf2a_ 76 GVILNE--KIPP---EVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLL 150 (267)
T ss_dssp EEEEEC--CBCH---HHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEE
T ss_pred CCCCCC--CCCH---HHHHHHHHHHHHCCCEEEEEECCEEEECCCCHHHHHHHHHCCCCCEECCCHHHHHHHCCCEEEEE
T ss_conf 643245--7998---99999999997338427874076688627748889898860787220476888744116237888
Q ss_pred -CCHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCH
Q ss_conf -1134499999999998618990998879099999399999999999999754479994629999099003999998024
Q 003682 660 -FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 660 -~~~~~a~~l~~~l~~~l~~~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~ 738 (803)
....+..++.+.+.+.+.+....+.++..++||.|+++|||.|++++++++ +++.+++++|||+.||++||+.++.
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~---~i~~~~vva~GD~~ND~~ml~~~~~ 227 (267)
T d1nf2a_ 151 IDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERM---NWKKEEIVVFGDNENDLFMFEEAGL 227 (267)
T ss_dssp ECCHHHHHHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHH---TCCGGGEEEEECSHHHHHHHTTCSE
T ss_pred ECCHHHHHHHHHHHHHHHCCCEEEEEEECCEEEECCCCCCHHHHHHHHHHHH---CCCCCCEEEECCCCCHHHHHHHCCC
T ss_conf 4559999999999988607838999962114565587775167899998860---3682208998088440999986890
Q ss_pred HCCCCCCCCCCCEEEEEECCC----CCCCEEEEC--CHHHHHHHHHHHHH
Q ss_conf 028999999850589992798----862406809--97599999999897
Q 003682 739 AAAGPSLSPVAEVFACTVGQK----PSKAKYYLD--DTAEILRMLLGLAE 782 (803)
Q Consensus 739 ~~a~~~~~~~~~~~~V~vG~~----~s~A~~~i~--~~~ev~~~L~~l~~ 782 (803)
+|+||++ +..|+|++. +.++|+.+|++|..
T Consensus 228 --------------sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~~ll~ 263 (267)
T d1nf2a_ 228 --------------RVAMENAIEKVKEASDIVTLTNNDSGVSYVLERIST 263 (267)
T ss_dssp --------------EEECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBCB
T ss_pred --------------EEEECCCCHHHHHHCCEECCCCCCCHHHHHHHHHHH
T ss_conf --------------899489989999858988588875389999999985
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.97 E-value=3.3e-29 Score=197.62 Aligned_cols=304 Identities=15% Similarity=0.142 Sum_probs=213.0
Q ss_pred HHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCCH---HHHH------CC--CCCHHHHHHHHCC
Q ss_conf 99999865199999689838643315899985079972998970679993---6540------29--8808999997609
Q 003682 128 FADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS---EIYR------TL--PIRDELLRALLNA 196 (803)
Q Consensus 128 fa~~i~~~~~~~~d~vwihDyhl~llp~~lr~~~~~~~i~~f~H~pfP~~---~~~~------~l--p~~~~ll~~ll~~ 196 (803)
.++.+.+... ..|+|++|+++..+++.++.+. .+.++.+.+|..++.. ..+. .. +.......+...+
T Consensus 110 ~~~~~~~~~~-~pDiIh~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (437)
T d2bisa1 110 LLNDLLREEP-LPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIA 187 (437)
T ss_dssp HHHHHTTSSC-CCSEEEEETGGGHHHHHHHHHH-HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHS
T ss_pred HHHHHHHCCC-CCCEEEECCHHHHHHHHHHHCC-CCCCEEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 8999984089-9978998970466676543013-4676258996214455512332101201345677889998888765
Q ss_pred CEEECCCHHHHHHHHHHHHHHHCCEECCCCCEEEEEECCEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHH--CC
Q ss_conf 9880159766998999999871960225676014998693999968225579168997709943899999999981--89
Q 003682 197 DLIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF--KG 274 (803)
Q Consensus 197 dligf~~~~~~~~Fl~~~~~~lg~~~~~~~~~~~~~~~g~~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~ 274 (803)
|.+......+...... ..+. ...++.++|+|+|++.|.+....+........++..+ .+
T Consensus 188 d~v~~~~~~~~~~~~~----~~~~---------------~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (437)
T d2bisa1 188 DIVTTVSRGYLIDEWG----FFRN---------------FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDE 248 (437)
T ss_dssp SEEEESCHHHHHHTHH----HHGG---------------GTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCS
T ss_pred HHHCCCCHHHHHHHHH----HHCC---------------CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 2211110245666666----5134---------------56751897046544343322220105888876545540267
Q ss_pred CEEEEEECCCCC-CCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
Q ss_conf 779994147432-3488899999999998199998957899993289999146999999999999998602199995108
Q 003682 275 QIVMLGVDDMDI-FKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 353 (803)
Q Consensus 275 ~~iil~v~Rl~~-~Kgi~~~l~A~~~ll~~~p~~~~~v~li~i~~~~~~~~~~~~~l~~~i~~lv~~in~~~~~~~~~~v 353 (803)
+++|+++||++. .||+..+++|+..+..+... .++.|+++|.+. +.+....+.+.+ .. ..+
T Consensus 249 ~~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~--~~~~lvi~G~~~----~~~~~~~~~~~~-------~~-----~~~ 310 (437)
T d2bisa1 249 GVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKGD----PELEGWARSLEE-------KH-----GNV 310 (437)
T ss_dssp CEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCBC----HHHHHHHHHHHH-------TC-----TTE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCC--CCCEEEEECCCC----CCCCCCHHHHCC-------CC-----CCC
T ss_conf 866987303566512589998641023323333--321145310223----333210022102-------32-----100
Q ss_pred EEECCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC--C
Q ss_conf 99618999989999998543230035566788883113452138853222248999999986089624424312388--9
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS--G 431 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~adv~v~tS~~Eg~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~--~ 431 (803)
+++.+.++.+++..+|+.||+++.||..||++++++|||+| |.|+|+|+.+|..+.+. .
T Consensus 311 ~~~~~~~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~-------------------G~Pvi~~~~g~~~e~i~~~~ 371 (437)
T d2bisa1 311 KVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL-------------------GAIPIASAVGGLRDIITNET 371 (437)
T ss_dssp EEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTT-------------------TCEEEEESCTTHHHHCCTTT
T ss_pred EECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHC-------------------CCCEEEECCCCCHHHEECCC
T ss_conf 00234576888999876422354446555642689999987-------------------99899938998077377895
Q ss_pred CCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8052899989999999999379999999999986020022797799999999999999
Q 003682 432 AIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERAC 489 (803)
Q Consensus 432 ~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~~~~ 489 (803)
|++|+|.|++++|++|.++|.++++.++...++.++..++++|+.+++++++.+.++.
T Consensus 372 G~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~i 429 (437)
T d2bisa1 372 GILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSI 429 (437)
T ss_dssp CEEECTTCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTCS
T ss_pred EEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 8997799999999999999837999999999999999996999999999999999999
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.97 E-value=3.7e-28 Score=191.06 Aligned_cols=223 Identities=18% Similarity=0.188 Sum_probs=148.3
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC-CCCEEECCCEEEEECCCEE
Q ss_conf 959999438867899999999998999999997318998399995899654999862278-9717811858999389422
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGVD 610 (803)
Q Consensus 532 ~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~-~l~liaenG~~i~~~~~~~ 610 (803)
+|+|+||+||||++ .+..+++++.++|++| +++|+.++++|||+...+.+.+..+. ..+++++||+.+..+++..
T Consensus 1 iKli~~DlDGTLl~---~~~~i~~~~~~~l~~l-~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~~ 76 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLN---SKHQVSLENENALRQA-QRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRL 76 (285)
T ss_dssp CCEEEEECCCCCSC---TTSCCCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCE
T ss_pred CEEEEEECCCCCCC---CCCCCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCEEEEECCCCE
T ss_conf 90999978866418---8794199999999999-9788999999799989999999980998589954731699568743
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECC-----------------------------------------CEE
Q ss_conf 786068888018999999999984059972584134-----------------------------------------328
Q 003682 611 WETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKE-----------------------------------------SAL 649 (803)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~il~~~~~~~~gs~ie~k~-----------------------------------------~~~ 649 (803)
+.... .+ .+.+.++++.+.+......+.... ...
T Consensus 77 i~~~~--i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (285)
T d1nrwa_ 77 YHHET--ID---KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGF 151 (285)
T ss_dssp EEECC--CC---HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCE
T ss_pred EEECC--CC---HHHHHHHHHHHHHCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf 56416--88---89999999999976971687417648860663777777777664057421055653333333101452
Q ss_pred EE--EECCC---C-CC-C-----CHHHHHHHHHHHHHHHCCCCE-EEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 97--41047---9-76-1-----134499999999998618990-99887909999939999999999999975447999
Q 003682 650 VW--NFQYA---D-PD-F-----GSCQAKELLDHLESVLANEPV-SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGML 716 (803)
Q Consensus 650 ~~--~~~~~---d-~~-~-----~~~~a~~l~~~l~~~l~~~~~-~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~ 716 (803)
.. .+... + +. . .......+...+......... .+.++..++||.|+++|||.|++++++++ |++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ldi~~~~~~K~~ai~~l~~~~---gi~ 228 (285)
T d1nrwa_ 152 AYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQL---NIP 228 (285)
T ss_dssp EECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHT---TCC
T ss_pred EEECHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHC---CCC
T ss_conf 01031888763145211201311232189999999986327976999947968999555402366898877650---557
Q ss_pred CCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCC----CCCCEEEECC--HHHHHHHHHHH
Q ss_conf 4629999099003999998024028999999850589992798----8624068099--75999999998
Q 003682 717 PDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRMLLGL 780 (803)
Q Consensus 717 ~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~----~s~A~~~i~~--~~ev~~~L~~l 780 (803)
++++++|||+.||++||+.++. +|+|+++ +..|+|++.+ .++|+++|++|
T Consensus 229 ~~~vi~~GD~~ND~~Ml~~a~~--------------svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~l 284 (285)
T d1nrwa_ 229 LEETAAVGDSLNDKSMLEAAGK--------------GVAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 284 (285)
T ss_dssp GGGEEEEESSGGGHHHHHHSSE--------------EEECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred CCCEEEEECCHHHHHHHHHCCE--------------EEEECCCCHHHHHHCCEECCCCCCCHHHHHHHHH
T ss_conf 2049999297888999984891--------------8996899899998589882788755899999986
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.96 E-value=1.4e-27 Score=187.42 Aligned_cols=235 Identities=18% Similarity=0.206 Sum_probs=161.2
Q ss_pred HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCC-------CCCCEE
Q ss_conf 9999815995999943886789999999999899999999731899839999589965499986227-------897178
Q 003682 524 VSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC-------EGLGIA 596 (803)
Q Consensus 524 ~~~y~~~~~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~-------~~l~li 596 (803)
.++++.+++|+|+||+||||+.. .+..+++.++++|++| +++|+.|+++|||++..+.+.++.+ .....+
T Consensus 2 ~~~~~~~~ikli~~DlDGTLl~~--~~~~i~~~~~~al~~l-~~~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i 78 (283)
T d2b30a1 2 EEALKGADIKLLLIDFDGTLFVD--KDIKVPSENIDAIKEA-IEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGV 78 (283)
T ss_dssp HHHTTTCCCCEEEEETBTTTBCC--TTTCSCHHHHHHHHHH-HHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEE
T ss_pred CCCCCCCCCCEEEEECCCCCCCC--CCCCCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEE
T ss_conf 66675359619999888888489--8996799999999999-98899899986999899999999847665455577437
Q ss_pred ECCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCC--CCEEEECCCEEEE---------------------EE
Q ss_conf 118589993894227860688880189999999999840599--7258413432897---------------------41
Q 003682 597 AEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTD--GSTIETKESALVW---------------------NF 653 (803)
Q Consensus 597 aenG~~i~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~--gs~ie~k~~~~~~---------------------~~ 653 (803)
+.||+.++.......... ..+. .....+++.+..... ..+.......... ..
T Consensus 79 ~~~g~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (283)
T d2b30a1 79 YINGTIVYDQIGYTLLDE--TIET---DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRH 153 (283)
T ss_dssp EGGGTEEECTTCCEEEEC--CCCH---HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECH
T ss_pred EEEEEEEECCCCCEEEEC--CCCH---HHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCHHHHHHHHHHHCCCCCCCCH
T ss_conf 875458984899683102--5687---88899998877506651589973230687046327788888741165533667
Q ss_pred CC-CC-CC-------CCHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 04-79-76-------11344999999999986189909988790999993999999999999997544799946299990
Q 003682 654 QY-AD-PD-------FGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIG 724 (803)
Q Consensus 654 ~~-~d-~~-------~~~~~a~~l~~~l~~~l~~~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iG 724 (803)
.. .. .. ....+...+.+.+.+.+......+..+..++|+.|++++|+.+++.+++++ +++.+++++||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~~---~i~~~~vi~~G 230 (283)
T d2b30a1 154 NEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHY---NISNDQVLVVG 230 (283)
T ss_dssp HHHTTCCCCSEEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHT---TCCGGGEEEEE
T ss_pred HHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHC---CCCCCEEEEEC
T ss_conf 777402661389996688999999999999845661378852406762477650577888776641---00202079964
Q ss_pred CCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCC----CCCCEEEECC---HHHHHHHHHHHHHH
Q ss_conf 99003999998024028999999850589992798----8624068099---75999999998973
Q 003682 725 DDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDD---TAEILRMLLGLAEA 783 (803)
Q Consensus 725 D~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~----~s~A~~~i~~---~~ev~~~L~~l~~~ 783 (803)
|+.||++||+.++. +|+||++ +..|+|++.. ...|..+|+++.+.
T Consensus 231 D~~ND~~Ml~~a~~--------------~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~~ 282 (283)
T d2b30a1 231 DAENDIAMLSNFKY--------------SFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 282 (283)
T ss_dssp CSGGGHHHHHSCSE--------------EEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHCCC--------------EEEECCCCHHHHHHCCEEECCCCCCCHHHHHHHHHHCC
T ss_conf 87636999985891--------------89968998999984899999848886999999999737
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.96 E-value=6.2e-28 Score=189.63 Aligned_cols=224 Identities=13% Similarity=0.155 Sum_probs=144.0
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH--CC-CCCCEEECCCEEEEECCC
Q ss_conf 959999438867899999999998999999997318998399995899654999862--27-897178118589993894
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS--SC-EGLGIAAEHGYFVRPNYG 608 (803)
Q Consensus 532 ~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~--~~-~~l~liaenG~~i~~~~~ 608 (803)
.|+||||+||||++. ....++++++++|++| ++.|+.|+++|||+...+..... .+ ...+++++||++++.++.
T Consensus 1 ~k~if~DlDGTL~~~--~~~~i~~~~~~al~~l-~~~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~nGa~i~~~~~ 77 (260)
T d2rbka1 1 TKALFFDIDGTLVSF--ETHRIPSSTIEALEAA-HAKGLKIFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEE 77 (260)
T ss_dssp CCEEEECSBTTTBCT--TTSSCCHHHHHHHHHH-HHTTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEEGGGTEEEETTE
T ss_pred CEEEEEECCCCCCCC--CCCCCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
T ss_conf 929999888887189--9799899999999999-9788999998899889999999997158877347627740125753
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEE----------ECCC--CCCCC-------------HH
Q ss_conf 22786068888018999999999984059972584134328974----------1047--97611-------------34
Q 003682 609 VDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWN----------FQYA--DPDFG-------------SC 663 (803)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~il~~~~~~~~gs~ie~k~~~~~~~----------~~~~--d~~~~-------------~~ 663 (803)
..+...++ .+....+...+..+. .+.............. +... .+... ..
T Consensus 78 ~i~~~~l~---~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (260)
T d2rbka1 78 VIYKSAIP---QEEVKAMAAFCEKKG--VPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPF 152 (260)
T ss_dssp EEEECCCC---HHHHHHHHHHHHHHT--CCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEEC
T ss_pred CCCCCCCC---HHHHHHHHHHHHHCC--CCEEEEECCCEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEC
T ss_conf 21046788---899999999999739--8689983575541364078999999863257676567767367646988512
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCC
Q ss_conf 49999999999861899099887909999939999999999999975447999462999909900399999802402899
Q 003682 664 QAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGP 743 (803)
Q Consensus 664 ~a~~l~~~l~~~l~~~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~ 743 (803)
...+....+.+.+.. ......+..++||.|+++|||.|++++++++ +++++++++|||+.||++||+.++.
T Consensus 153 ~~~~~~~~~~~~~~~-~~~~~~~~~~~ei~p~~~sK~~al~~l~~~~---~i~~~~~~a~GD~~ND~~Ml~~a~~----- 223 (260)
T d2rbka1 153 ITEEEEKEVLPSIPT-CEIGRWYPAFADVTAKGDTKQKGIDEIIRHF---GIKLEETMSFGDGGNDISMLRHAAI----- 223 (260)
T ss_dssp CCHHHHHHHGGGSTT-CEEECSSTTCCEEESTTCSHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSE-----
T ss_pred CCHHHHHHHHHHHCC-CCCEEECCCEEEEEECCCCHHHHHHHHHHHC---CCCHHHEEEECCCCCCHHHHHHCCE-----
T ss_conf 788999999987215-5401455867999748899999999998732---2357551676588555999984890-----
Q ss_pred CCCCCCCEEEEEECCC----CCCCEEEECC--HHHHHHHHHHHH
Q ss_conf 9999850589992798----8624068099--759999999989
Q 003682 744 SLSPVAEVFACTVGQK----PSKAKYYLDD--TAEILRMLLGLA 781 (803)
Q Consensus 744 ~~~~~~~~~~V~vG~~----~s~A~~~i~~--~~ev~~~L~~l~ 781 (803)
+|+|+++ +..|+|++.+ .++|++.|+++.
T Consensus 224 ---------svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~~~ 258 (260)
T d2rbka1 224 ---------GVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHFG 258 (260)
T ss_dssp ---------EEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHHT
T ss_pred ---------EEEECCCCHHHHHHCCEEECCCCCCHHHHHHHHHC
T ss_conf ---------89958998999984797808887568999999858
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.95 E-value=3.9e-26 Score=178.43 Aligned_cols=218 Identities=20% Similarity=0.214 Sum_probs=151.9
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCC-CCCCEEECCCEEEEECCCE
Q ss_conf 995999943886789999999999899999999731899839999589965499986227-8971781185899938942
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC-EGLGIAAEHGYFVRPNYGV 609 (803)
Q Consensus 531 ~~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~-~~l~liaenG~~i~~~~~~ 609 (803)
++|+|+||+||||++ ....+++++.++|++| ++.|+.|+++|||+...+...+..+ .+..++++||+.+......
T Consensus 1 kiK~i~~D~DGTL~~---~~~~i~~~~~~~l~~l-~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~ 76 (230)
T d1wr8a_ 1 KIKAISIDIDGTITY---PNRMIHEKALEAIRRA-ESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76 (230)
T ss_dssp CCCEEEEESTTTTBC---TTSCBCHHHHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEE
T ss_pred CCEEEEEECCCCCCC---CCCCCCHHHHHHHHHH-HHCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCC
T ss_conf 936999916777737---9894699999999999-867995999927868889999986488732001222010024210
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCEE
Q ss_conf 27860688880189999999999840599725841343289741047976113449999999999861899099887909
Q 003682 610 DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNI 689 (803)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~il~~~~~~~~gs~ie~k~~~~~~~~~~~d~~~~~~~a~~l~~~l~~~l~~~~~~v~~g~~~ 689 (803)
.+... ....+ .....+...+...........+...+.+.....+ ....+++.+ .+. .......+...
T Consensus 77 ~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~-~~~~~~~~~~~ 143 (230)
T d1wr8a_ 77 IFLAS---MDEEW-ILWNEIRKRFPNARTSYTMPDRRAGLVIMRETIN----VETVREIIN----ELN-LNLVAVDSGFA 143 (230)
T ss_dssp EESCC---CSHHH-HHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSC----HHHHHHHHH----HTT-CSCEEEECSSC
T ss_pred CCCCC---CCHHH-HHHHHHHHHCCCCCCEEECCCCEEEEEEECCCCC----HHHHHHHHH----HHC-CCEEEEECCCE
T ss_conf 00234---41889-9999999862665421441442245899346116----999999999----836-65289608948
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCC----CCCCEE
Q ss_conf 9999399999999999999754479994629999099003999998024028999999850589992798----862406
Q 003682 690 VEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKY 765 (803)
Q Consensus 690 iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~----~s~A~~ 765 (803)
+|+.|.+.+|+.+++++++++ +++++++++|||+.||++||+.++. +|+||++ +..|+|
T Consensus 144 iei~~~~~~K~~al~~l~~~~---~i~~~~~~~iGD~~NDi~ml~~ag~--------------~vav~na~~~~k~~A~~ 206 (230)
T d1wr8a_ 144 IHVKKPWINKGSGIEKASEFL---GIKPKEVAHVGDGENDLDAFKVVGY--------------KVAVAQAPKILKENADY 206 (230)
T ss_dssp EEEECTTCCHHHHHHHHHHHH---TSCGGGEEEEECSGGGHHHHHHSSE--------------EEECTTSCHHHHTTCSE
T ss_pred EEEEECCCCCCHHHCCCCCCC---CCCHHHEEEEECCCCHHHHHHHCCE--------------EEEECCCCHHHHHHCCE
T ss_conf 999407767613320112110---0133242566267307999997890--------------79988987999985799
Q ss_pred EECC--HHHHHHHHHHHHH
Q ss_conf 8099--7599999999897
Q 003682 766 YLDD--TAEILRMLLGLAE 782 (803)
Q Consensus 766 ~i~~--~~ev~~~L~~l~~ 782 (803)
++.+ .+++++.+..+..
T Consensus 207 v~~~~~~~gv~~~i~~~l~ 225 (230)
T d1wr8a_ 207 VTKKEYGEGGAEAIYHILE 225 (230)
T ss_dssp ECSSCHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHH
T ss_conf 9899984789999999999
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.95 E-value=7.7e-26 Score=176.56 Aligned_cols=212 Identities=16% Similarity=0.136 Sum_probs=150.4
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC-CCCEEECCCEEEEECCCE
Q ss_conf 9959999438867899999999998999999997318998399995899654999862278-971781185899938942
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGV 609 (803)
Q Consensus 531 ~~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~-~l~liaenG~~i~~~~~~ 609 (803)
|+|+++||+||||++ ....+++.+.++|++| .+.|+.++++|||+...+......++ ...++++||+.+..+...
T Consensus 2 miKli~~D~DGTL~~---~~~~i~~~~~~al~~l-~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~ 77 (225)
T d1l6ra_ 2 MIRLAAIDVDGNLTD---RDRLISTKAIESIRSA-EKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77 (225)
T ss_dssp CCCEEEEEHHHHSBC---TTSCBCHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSC
T ss_pred CEEEEEEECCCCCCC---CCCCCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCEEEEECCCC
T ss_conf 708999965887738---9994799999999999-877998999828860326999998198852886041699967951
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEE---CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 27860688880189999999999840599725841---343289741047976113449999999999861899099887
Q 003682 610 DWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIET---KESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSG 686 (803)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~il~~~~~~~~gs~ie~---k~~~~~~~~~~~d~~~~~~~a~~l~~~l~~~l~~~~~~v~~g 686 (803)
.+... . . +......+....+..-..... ......+ . .++ .+.. .+..........+..+
T Consensus 78 ~~~~~-~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~----~~~~----~~~~~~~~~~~~i~~~ 139 (225)
T d1l6ra_ 78 IKKFF-S--N----EGTNKFLEEMSKRTSMRSILTNRWREASTGF--D-IDP----EDVD----YVRKEAESRGFVIFYS 139 (225)
T ss_dssp EEESS-C--S----HHHHHHHHHHTTTSSCBCCGGGGGCSSSEEE--B-CCG----GGHH----HHHHHHHTTTEEEEEE
T ss_pred EEEEC-C--H----HHHHHHHHHHHHHCCCCEEECCCCEEEEECC--C-CCH----HHHH----HHHHHHHHCCCEEEEC
T ss_conf 78736-8--6----8999999999873485424203220231002--3-589----9999----9999874257299988
Q ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCC----CCC
Q ss_conf 9099999399999999999999754479994629999099003999998024028999999850589992798----862
Q 003682 687 PNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSK 762 (803)
Q Consensus 687 ~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~----~s~ 762 (803)
...+|+.|++.+||.+++++++++ +++++++++|||+.||++||+.++. +|+|++. +..
T Consensus 140 ~~~~~i~~~~~~K~~ai~~l~~~~---~i~~~~v~~~GDs~nD~~m~~~a~~--------------~vav~na~~~~k~~ 202 (225)
T d1l6ra_ 140 GYSWHLMNRGEDKAFAVNKLKEMY---SLEYDEILVIGDSNNDMPMFQLPVR--------------KACPANATDNIKAV 202 (225)
T ss_dssp TTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEECCSGGGHHHHTSSSE--------------EEECTTSCHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHH---CCCHHHEEEECCCCCHHHHHHHCCE--------------EEEECCCCHHHHHH
T ss_conf 917996387652278999876651---0023022564488435999997790--------------89988975999984
Q ss_pred CEEEEC--CHHHHHHHHHHHH
Q ss_conf 406809--9759999999989
Q 003682 763 AKYYLD--DTAEILRMLLGLA 781 (803)
Q Consensus 763 A~~~i~--~~~ev~~~L~~l~ 781 (803)
|+|++. +.+++++.++.+.
T Consensus 203 ad~v~~~~~~~gi~~~l~~~~ 223 (225)
T d1l6ra_ 203 SDFVSDYSYGEEIGQIFKHFE 223 (225)
T ss_dssp CSEECSCCTTHHHHHHHHHTT
T ss_pred CCEEECCCCCCHHHHHHHHHC
T ss_conf 999989898488999999867
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.93 E-value=1.2e-25 Score=175.25 Aligned_cols=215 Identities=17% Similarity=0.211 Sum_probs=137.1
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC---CCCEEECCCEEEEEC
Q ss_conf 59959999438867899999999998999999997318998399995899654999862278---971781185899938
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE---GLGIAAEHGYFVRPN 606 (803)
Q Consensus 530 ~~~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~---~l~liaenG~~i~~~ 606 (803)
|++.+|++|+||||++ ..+. ++...++.++ ..+|+.|+++|||+...+.+.+..+. .-.++++||+.++.+
T Consensus 1 m~~~li~~DlDGTL~~---~~~~--~~~~~~~~~~-~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~ 74 (244)
T d1s2oa1 1 MRQLLLISDLDNTWVG---DQQA--LEHLQEYLGD-RRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHP 74 (244)
T ss_dssp CCSEEEEECTBTTTBS---CHHH--HHHHHHHHHT-TGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEET
T ss_pred CCCEEEEEECCCCCCC---CCCC--HHHHHHHHHH-HCCCCEEEEECCCCHHHHHHHHHHCCCCCCCEEEECCCEEEEEC
T ss_conf 9766999989666799---9989--8999999999-81999899988999899999999739987765885162599971
Q ss_pred CCEE--EEEECCCCCCCHHHHHHHHHHHHHHCCCCCEE----EECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC--
Q ss_conf 9422--78606888801899999999998405997258----413432897410479761134499999999998618--
Q 003682 607 YGVD--WETCVSVPDFSWKQIAEPVMKLYTETTDGSTI----ETKESALVWNFQYADPDFGSCQAKELLDHLESVLAN-- 678 (803)
Q Consensus 607 ~~~~--~~~~~~~~~~~~~~~~~~il~~~~~~~~gs~i----e~k~~~~~~~~~~~d~~~~~~~a~~l~~~l~~~l~~-- 678 (803)
.... |...... .|. ......+.+..+.... +.....+.+.+...... +..+.+...+..
T Consensus 75 ~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 141 (244)
T d1s2oa1 75 EGLDQHWADYLSE---HWQ---RDILQAIADGFEALKPQSPLEQNPWKISYHLDPQACP-------TVIDQLTEMLKETG 141 (244)
T ss_dssp TEECHHHHHHHHT---TCC---HHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSCT-------HHHHHHHHHHHTSS
T ss_pred CCCCHHHHHHHHH---HHH---HHHHHHHHHHCCCCCCCCHHHHCCEEEEEECCCCCCH-------HHHHHHHHHHHHHC
T ss_conf 6741678988878---876---8799999853554332572440626899952521158-------99999999998632
Q ss_pred -CCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEEC
Q ss_conf -9909988790999993999999999999997544799946299990990039999980240289999998505899927
Q 003682 679 -EPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG 757 (803)
Q Consensus 679 -~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG 757 (803)
.......+...+++.|++++||.|++++++.+ |++.+++++|||+.||++||+.++. +|+||
T Consensus 142 ~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~---gi~~~~~v~~GD~~ND~~Ml~~~~~--------------~vav~ 204 (244)
T d1s2oa1 142 IPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHL---AMEPSQTLVCGDSGNDIGLFETSAR--------------GVIVR 204 (244)
T ss_dssp CCEEEEEETTTEEEEEETTCSHHHHHHHHHHHT---TCCGGGEEEEECSGGGHHHHTSSSE--------------EEECT
T ss_pred CCCEEEECCCCEEEEEECCCCHHHHHHHHHHHC---CCCHHHEEEECCCCCCHHHHHHCCC--------------EEEEC
T ss_conf 341266307818999867641557788887741---5773037997588877999961891--------------89967
Q ss_pred CCC----CCCE-------EEEC--CHHHHHHHHHHH
Q ss_conf 988----6240-------6809--975999999998
Q 003682 758 QKP----SKAK-------YYLD--DTAEILRMLLGL 780 (803)
Q Consensus 758 ~~~----s~A~-------~~i~--~~~ev~~~L~~l 780 (803)
++. ..|+ |+.. ..+++++.|+..
T Consensus 205 na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~f 240 (244)
T d1s2oa1 205 NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAHF 240 (244)
T ss_dssp TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHH
T ss_conf 999999998632366653771899714899999982
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.93 E-value=9.5e-26 Score=175.99 Aligned_cols=220 Identities=19% Similarity=0.161 Sum_probs=136.8
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC-CCCEEECCCEEEEECCCE
Q ss_conf 9959999438867899999999998999999997318998399995899654999862278-971781185899938942
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE-GLGIAAEHGYFVRPNYGV 609 (803)
Q Consensus 531 ~~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~-~l~liaenG~~i~~~~~~ 609 (803)
|+|+|++|+||||++ ... ++++.++|++| ++.|+.|+++|||++..+.+++..++ ..+++++||+.+..++..
T Consensus 1 miKli~~DlDGTLl~---~~~--~~~~~~ai~~l-~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 74 (243)
T d1wzca1 1 MIRLIFLDIDKTLIP---GYE--PDPAKPIIEEL-KDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGY 74 (243)
T ss_dssp CEEEEEECCBTTTBS---SSC--SGGGHHHHHHH-HHTTEEEEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEECTTC
T ss_pred CCEEEEEECCCCCCC---CCC--CHHHHHHHHHH-HHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCC
T ss_conf 937999927777789---998--88999999999-988999999919888999999998364421001478489708984
Q ss_pred EEEEECC-----------CCCC-CHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCC---------CCCHHHHHHH
Q ss_conf 2786068-----------8880-18999999999984059972584134328974104797---------6113449999
Q 003682 610 DWETCVS-----------VPDF-SWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADP---------DFGSCQAKEL 668 (803)
Q Consensus 610 ~~~~~~~-----------~~~~-~~~~~~~~il~~~~~~~~gs~ie~k~~~~~~~~~~~d~---------~~~~~~a~~l 668 (803)
....... .... .+.......-..+... ........... .+....+ .+........
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (243)
T d1wzca1 75 FPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLK-YYGNSTKEEIE---KFTGMPPELVPLAMEREYSETIFEWS 150 (243)
T ss_dssp CC----------CEEEECSCCHHHHHHHHHHHHHHHTCB-CGGGSCHHHHH---HHHCCCGGGHHHHTCCSSEEEECBCS
T ss_pred EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHH---HHHCCCHHHHHHHHHHHCCHHHHHHH
T ss_conf 303543067788999987521999999997655311210-03134488887---76247646778888631341134444
Q ss_pred HHHHHHHHCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCC-CCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCC
Q ss_conf 9999998618990998879099999399999999999999754479-994629999099003999998024028999999
Q 003682 669 LDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKG-MLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSP 747 (803)
Q Consensus 669 ~~~l~~~l~~~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g-~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~ 747 (803)
...+.+........+..+. .+++.|++++|+.|++++++++ + ++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~K~~al~~l~~~~---~~~~~~~~~a~GD~~ND~~Ml~~a~~--------- 217 (243)
T d1wzca1 151 RDGWEEVLVEGGFKVTMGS-RFYTVHGNSDKGKAAKILLDFY---KRLGQIESYAVGDSYNDFPMFEVVDK--------- 217 (243)
T ss_dssp SSCHHHHHHHTTCEEEECS-SSEEEECSCCHHHHHHHHHHHH---HTTSCEEEEEEECSGGGHHHHTTSSE---------
T ss_pred HHHHHHHHHHCCEEEEECC-CCCCHHHHHCCHHHHHHHHHHH---CCCCCCCEEEECCCHHHHHHHHCCCC---------
T ss_conf 6789986552376884236-5300103110077999999983---59991419998498858999984993---------
Q ss_pred CCCEEEEEECCCCCCCEEEECCHHHHHHHHH
Q ss_conf 8505899927988624068099759999999
Q 003682 748 VAEVFACTVGQKPSKAKYYLDDTAEILRMLL 778 (803)
Q Consensus 748 ~~~~~~V~vG~~~s~A~~~i~~~~ev~~~L~ 778 (803)
+|+||++....+-.+++..|+.++++
T Consensus 218 -----~va~~Na~~~~~~~~~~i~~~~~~i~ 243 (243)
T d1wzca1 218 -----VFIVGSLKHKKAQNVSSIIDVLEVIK 243 (243)
T ss_dssp -----EEEESSCCCTTCEEESCHHHHHHHHT
T ss_pred -----EEEECCCCHHHHHHHHHHHHHHHHHC
T ss_conf -----89927998688702318888887419
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=6.7e-25 Score=170.68 Aligned_cols=207 Identities=17% Similarity=0.122 Sum_probs=128.3
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC--CCCEEECCCEEEEECCCE
Q ss_conf 959999438867899999999998999999997318998399995899654999862278--971781185899938942
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCE--GLGIAAEHGYFVRPNYGV 609 (803)
Q Consensus 532 ~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~--~l~liaenG~~i~~~~~~ 609 (803)
..+||+|+||||++ .+..+++.++++|++| ++.|+.|+++|||+...+.+.+..+. ...++++||+.+......
T Consensus 4 ~~li~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 79 (232)
T d1xvia_ 4 PLLVFSDLDGTLLD---SHSYDWQPAAPWLTRL-REANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQW 79 (232)
T ss_dssp CEEEEEECTTTTSC---SSCCSCCTTHHHHHHH-HHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTC
T ss_pred CEEEEEECCCCCCC---CCCCCCHHHHHHHHHH-HHCCCEEEEEECCCHHHCHHHHHHHCCCCCEEECCCCEEEEECCCC
T ss_conf 87999978887528---9694799999999999-9779989999689736530688873457845971697699935775
Q ss_pred EEEEE----CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECC---CE-E-EEE--E------CCCCCCCCHHHHHHHHHHH
Q ss_conf 27860----68888018999999999984059972584134---32-8-974--1------0479761134499999999
Q 003682 610 DWETC----VSVPDFSWKQIAEPVMKLYTETTDGSTIETKE---SA-L-VWN--F------QYADPDFGSCQAKELLDHL 672 (803)
Q Consensus 610 ~~~~~----~~~~~~~~~~~~~~il~~~~~~~~gs~ie~k~---~~-~-~~~--~------~~~d~~~~~~~a~~l~~~l 672 (803)
..... .......+............ ........... .. . ... . ..................+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (232)
T d1xvia_ 80 QEIDGFPRIISGISHGEISLVLNTLREKE-HFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQF 158 (232)
T ss_dssp TTSTTTTEEECSSCHHHHHHHHHHHHHHH-CCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCHHHHHHH
T ss_conf 31201455555778999987654222220-21212332023555433310230134554411124531022529999889
Q ss_pred HHHHCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCC
Q ss_conf 99861899099887909999939999999999999975447999462999909900399999802402899
Q 003682 673 ESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGP 743 (803)
Q Consensus 673 ~~~l~~~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~ 743 (803)
.............+...+++.|.+++|+.+++.+++.+...|++++++++|||+.||++||+.++.++++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~vaV~ 229 (232)
T d1xvia_ 159 TARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK 229 (232)
T ss_dssp HHHHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC
T ss_pred HHHHHHCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHHHCCCCHHCEEEECCCHHHHHHHHHCCEEEEEE
T ss_conf 98765305503322530221478851789999999999975989521999849786899998199089971
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.91 E-value=9.1e-24 Score=163.63 Aligned_cols=189 Identities=15% Similarity=0.169 Sum_probs=146.4
Q ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHH--CCCEEEEEECCCC-CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf 579168997709943899999999981--8977999414743-2348889999999999819999895789999328999
Q 003682 246 GIHIGQLQSVLNLPETEAKVAELQDQF--KGQIVMLGVDDMD-IFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARG 322 (803)
Q Consensus 246 GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~iil~v~Rl~-~~Kgi~~~l~A~~~ll~~~p~~~~~v~li~i~~~~~~ 322 (803)
|||++.|.+........+....+++++ +++++|+++||++ +.||+..+++|++.+.++.+. .++.|+++|.+
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~--~~~~l~i~G~g--- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEF--QEMRFIIIGKG--- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGG--GGEEEEEECCB---
T ss_pred CCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCC--CCEEEEEEEEC---
T ss_conf 9181330898887016899999999959799988999768881104999999998864112578--88189999613---
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEECCCCCCC
Q ss_conf 91469999999999999986021999951089961899998999999854323003556678888311345213885322
Q 003682 323 RGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLD 402 (803)
Q Consensus 323 ~~~~~~~l~~~i~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~adv~v~tS~~Eg~~Lv~~Ea~a~~~~~~~~~ 402 (803)
.+.++.+.+.+.. . + ..++++.+.++.+++..+|+.||++++||..||+|++.+|||+|
T Consensus 76 -~~~~~~~~~~~~~---~----~-----~~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~-------- 134 (196)
T d2bfwa1 76 -DPELEGWARSLEE---K----H-----GNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL-------- 134 (196)
T ss_dssp -CHHHHHHHHHHHH---H----C-----TTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT--------
T ss_pred -CCCHHHHHHHHHH---C----C-----CEEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHC--------
T ss_conf -5521345433221---1----3-----11577530233211000012323344322211233220133314--------
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCC--CCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
Q ss_conf 2248999999986089624424312388--98052899989999999999379999999999986020022
Q 003682 403 MTLGLDPSTAKSSMLVVSEFVGCSPSLS--GAIRVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST 471 (803)
Q Consensus 403 ~~~~~~~~~~~~g~vV~S~~~G~~~~l~--~~~lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~ 471 (803)
|.|+|+|+.+|..+.+. .|++++|.|+++++++|.+++.+..+.+....+..+++..+
T Consensus 135 -----------G~pvI~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~ 194 (196)
T d2bfwa1 135 -----------GAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 194 (196)
T ss_dssp -----------TCEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred -----------CCEEEECCCCCCCEEECCCCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf -----------860465178853201028731467899999999999999957999999999999999983
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=4.2e-23 Score=159.50 Aligned_cols=216 Identities=16% Similarity=0.121 Sum_probs=134.4
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCC---CCCCEEECCCEEEEECC
Q ss_conf 995999943886789999999999899999999731899839999589965499986227---89717811858999389
Q 003682 531 KNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC---EGLGIAAEHGYFVRPNY 607 (803)
Q Consensus 531 ~~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~---~~l~liaenG~~i~~~~ 607 (803)
..||++||+||||++ .+..++++++++|++| ++.| .++++|||+...+.+.+... ........+|+++...+
T Consensus 2 ~~kl~~fDlDGTLl~---~~~~i~~~~~~al~~l-~~~g-~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T d2amya1 2 GPALCLFDVDGTLTA---PRQKITKEMDDFLQKL-RQKI-KIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDG 76 (243)
T ss_dssp CSEEEEEESBTTTBC---TTSCCCHHHHHHHHHH-TTTS-EEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETT
T ss_pred CCEEEEECCCCCEEC---CCCCCCHHHHHHHHHH-HCCC-CEEEECCCCHHHHHHHHHHHCCCCCEEEECCCEEEEECCC
T ss_conf 987999867478208---9994899999999999-8099-8999958986886788765216564299527479993388
Q ss_pred CEEEEEECCCCC-CCHHHHHHH-HHHHHHHCC----CCCEEEECCCEEEEEECCCCCCCC-----------HHHHHHHHH
Q ss_conf 422786068888-018999999-999984059----972584134328974104797611-----------344999999
Q 003682 608 GVDWETCVSVPD-FSWKQIAEP-VMKLYTETT----DGSTIETKESALVWNFQYADPDFG-----------SCQAKELLD 670 (803)
Q Consensus 608 ~~~~~~~~~~~~-~~~~~~~~~-il~~~~~~~----~gs~ie~k~~~~~~~~~~~d~~~~-----------~~~a~~l~~ 670 (803)
...+........ ......... ....+.... .....+.......+.......... .....+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (243)
T d2amya1 77 KLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVA 156 (243)
T ss_dssp EEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred CCCEECCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 51110001288888898888764000100014531222022310112112222223542330123211001033589999
Q ss_pred HHHHHHCCCCE-EEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEEC----CHHHHHHHHHCCHHCCCCCC
Q ss_conf 99998618990-99887909999939999999999999975447999462999909----90039999980240289999
Q 003682 671 HLESVLANEPV-SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGD----DRSDEDMFEVIKSAAAGPSL 745 (803)
Q Consensus 671 ~l~~~l~~~~~-~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD----~~nD~~Mf~~~~~~~a~~~~ 745 (803)
.+.+.+..... ....+..++|+.|+++|||.|+++++ +++.+++++||| |.||++||+.+|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~l~------~~~~~ev~afGD~~~~g~NDi~Ml~~~g~------- 223 (243)
T d2amya1 157 DLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVE------NDGYKTIYFFGDKTMPGGNDHEIFTDPRT------- 223 (243)
T ss_dssp HHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTT------TSCCSEEEEEECSCC---CCCHHHHCTTE-------
T ss_pred HHHHHHCCCCEEEEECCCCCCEEECCCCCHHHHHHHHH------CCCCCEEEEECCCCCCCCCCHHHHHCCCC-------
T ss_conf 99987134552799528964155132167899999984------89936299986899999976999971597-------
Q ss_pred CCCCCEEEEEECCCCCCCEEEECCHHHHHHHHHHHH
Q ss_conf 998505899927988624068099759999999989
Q 003682 746 SPVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGLA 781 (803)
Q Consensus 746 ~~~~~~~~V~vG~~~s~A~~~i~~~~ev~~~L~~l~ 781 (803)
.+++ +++++++.+.++.|+
T Consensus 224 ------~~~~-----------v~~~~~~~~~~~~l~ 242 (243)
T d2amya1 224 ------MGYS-----------VTAPEDTRRICELLF 242 (243)
T ss_dssp ------EEEE-----------CSSHHHHHHHHHHHC
T ss_pred ------CEEE-----------ECCHHHHHHHHHHHH
T ss_conf ------2999-----------079999999999984
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=2.9e-24 Score=166.68 Aligned_cols=202 Identities=15% Similarity=0.171 Sum_probs=146.8
Q ss_pred EEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHH---CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE
Q ss_conf 9968225579168997709943899999999981---8977999414743234888999999999981999989578999
Q 003682 239 SIKILPVGIHIGQLQSVLNLPETEAKVAELQDQF---KGQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQ 315 (803)
Q Consensus 239 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iil~v~Rl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~li~ 315 (803)
++.++|+|+|++.+..... +... ...+..+ .++++++++||+.+.||+..+++|++.+.++.|+.. ++.
T Consensus 160 ~i~vi~~gv~~~~~~~~~~-~~~~---~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~----~~i 231 (370)
T d2iw1a1 160 RFQILPPGIYPDRKYSEQI-PNSR---EIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLF 231 (370)
T ss_dssp GEEECCCCCCGGGSGGGSC-TTHH---HHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEE
T ss_pred EEEEEEEECCCCCCCCCCC-HHHH---HHHHHCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCE----EEE
T ss_conf 2899974022221124676-5666---6654304888663699998514554203332011123323322100----000
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEE
Q ss_conf 93289999146999999999999998602199995108996189999899999985432300355667888831134521
Q 003682 316 IANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICR 395 (803)
Q Consensus 316 i~~~~~~~~~~~~~l~~~i~~lv~~in~~~~~~~~~~v~~~~~~~~~~~l~aly~~adv~v~tS~~Eg~~Lv~~Ea~a~~ 395 (803)
++.+. . + .++ ++++.+.+. ...+.+.+. .+++..+|+.||++++||..|||+++++|||+|
T Consensus 232 i~g~~--~-~--~~~----~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~- 292 (370)
T d2iw1a1 232 VVGQD--K-P--RKF----EALAEKLGV-------RSNVHFFSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITA- 292 (370)
T ss_dssp EESSS--C-C--HHH----HHHHHHHTC-------GGGEEEESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHH-
T ss_pred CCCCC--C-C--CCC----CCCCCCCCC-------CCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC-
T ss_conf 11222--2-2--232----222222222-------222222332--334442223333444322223433113321457-
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC---CCCC-EECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
Q ss_conf 3885322224899999998608962442431238---8980-52899989999999999379999999999986020022
Q 003682 396 QGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSL---SGAI-RVNPWNIDAVAEAMDSALGVSDAEKQMRHEKHYRYVST 471 (803)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l---~~~~-lvnP~d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~ 471 (803)
|.|+|+|+.+|..+.+ ..|. +++|.|++++|++|.+++++ ++.+....++.++++++
T Consensus 293 ------------------G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d-~~~~~~~~~~ar~~~~~ 353 (370)
T d2iw1a1 293 ------------------GLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADT 353 (370)
T ss_dssp ------------------TCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHH
T ss_pred ------------------CEEEEEECCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHH
T ss_conf ------------------70399938997188852798369986999999999999999769-99999999999999998
Q ss_pred CCHHHHHHHHHHHHH
Q ss_conf 797799999999999
Q 003682 472 HDVAYWARSFLQDLE 486 (803)
Q Consensus 472 ~~~~~W~~~~l~~l~ 486 (803)
+++..|.+...+-++
T Consensus 354 ~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 354 QDLYSLPEKAADIIT 368 (370)
T ss_dssp SCCSCHHHHHHHHHH
T ss_pred HCHHHHHHHHHHHHH
T ss_conf 285479999999984
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=5.8e-21 Score=146.10 Aligned_cols=212 Identities=17% Similarity=0.126 Sum_probs=122.8
Q ss_pred EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCC-----CCCCEEECCCEEEEECCC
Q ss_conf 999943886789999999999899999999731899839999589965499986227-----897178118589993894
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC-----EGLGIAAEHGYFVRPNYG 608 (803)
Q Consensus 534 lii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~-----~~l~liaenG~~i~~~~~ 608 (803)
+++||+||||++ .+..++++++++|+++ ++.|. ++++|||........+... ....+++.+|+++...+.
T Consensus 3 i~lFDlDGTLl~---~~~~is~~~~~~i~~l-~~~g~-~~i~tgrr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 77 (244)
T d2fuea1 3 LCLFDVDGTLTP---ARQKIDPEVAAFLQKL-RSRVQ-IGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHGR 77 (244)
T ss_dssp EEEEESBTTTBS---TTSCCCHHHHHHHHHH-TTTSE-EEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEETTE
T ss_pred EEEECCCCCCCC---CCCCCCHHHHHHHHHH-HHCCC-EEEEECCCHHHHHHHHHHHHCCCCCCCEEECCCCEEECCCCC
T ss_conf 999844568349---9895899999999999-86899-999966980651345665423345542231144002303785
Q ss_pred EEEEEECCCCC-CCHHHHHHH-HHHHHHHCC----CCCEEEECCCEEEEEECCCCCCCC-----------HHHHHHHHHH
Q ss_conf 22786068888-018999999-999984059----972584134328974104797611-----------3449999999
Q 003682 609 VDWETCVSVPD-FSWKQIAEP-VMKLYTETT----DGSTIETKESALVWNFQYADPDFG-----------SCQAKELLDH 671 (803)
Q Consensus 609 ~~~~~~~~~~~-~~~~~~~~~-il~~~~~~~----~gs~ie~k~~~~~~~~~~~d~~~~-----------~~~a~~l~~~ 671 (803)
..+........ ......... ......... ...+.........++......... .....+....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (244)
T d2fuea1 78 LLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEA 157 (244)
T ss_dssp ECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred CCEEECHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 12120135777666777777642333101102211242123444442023223332034545666530010367888999
Q ss_pred HHHHHCCCC-EEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECC----HHHHHHHHHCCHHCCCCCCC
Q ss_conf 999861899-0998879099999399999999999999754479994629999099----00399999802402899999
Q 003682 672 LESVLANEP-VSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDD----RSDEDMFEVIKSAAAGPSLS 746 (803)
Q Consensus 672 l~~~l~~~~-~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~----~nD~~Mf~~~~~~~a~~~~~ 746 (803)
+........ .....+..++||.|+++|||.|+++|++ ++.+++++|||+ .||++||+.++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~L~~------~~~~ev~afGD~~~~G~ND~eml~~a~~-------- 223 (244)
T d2fuea1 158 LKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQ------DSFDTIHFFGNETSPGGNDFEIFADPRT-------- 223 (244)
T ss_dssp HHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHHTT------SCCSEEEEEESCCSTTSTTHHHHHSTTS--------
T ss_pred HHHHHHCCCEEEEECCCCCCEECCHHCCHHHHHHHHHC------CCHHHEEEECCCCCCCCCCHHHHHCCCC--------
T ss_conf 99885103426764167600320322027899999966------9844599986889999972999971798--------
Q ss_pred CCCCEEEEEECCCCCCCEEEECCHHHHHHHHHHH
Q ss_conf 9850589992798862406809975999999998
Q 003682 747 PVAEVFACTVGQKPSKAKYYLDDTAEILRMLLGL 780 (803)
Q Consensus 747 ~~~~~~~V~vG~~~s~A~~~i~~~~ev~~~L~~l 780 (803)
.+++|+ ++++.++.+..+
T Consensus 224 -----~~~av~-----------na~~~~k~~~~~ 241 (244)
T d2fuea1 224 -----VGHSVV-----------SPQDTVQRCREI 241 (244)
T ss_dssp -----EEEECS-----------SHHHHHHHHHHH
T ss_pred -----CEEECC-----------CHHHHHHHHHHH
T ss_conf -----589918-----------989999999986
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.74 E-value=8.8e-18 Score=126.24 Aligned_cols=143 Identities=18% Similarity=0.186 Sum_probs=110.6
Q ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf 79994147432348889999999999819999895789999328999914699999999999999860219999510899
Q 003682 276 IVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPVVL 355 (803)
Q Consensus 276 ~iil~v~Rl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~li~i~~~~~~~~~~~~~l~~~i~~lv~~in~~~~~~~~~~v~~ 355 (803)
..++++||+++.||+..+++|+.++ |+.+ |+++|.+. +++..+.+.+++.+. ....|++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~----l~ivg~~~--~~~~~~~~~~~~~~~-----------~~~~v~~ 71 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS--KGDHAERYARKIMKI-----------APDNVKF 71 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC--TTSTHHHHHHHHHHH-----------SCTTEEE
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHH----CCCE----EEEEEECC--CCCCHHHHHHHHCCC-----------CCCCEEE
T ss_conf 9999992375434999999999983----3974----99997224--454223333220235-----------6675887
Q ss_pred ECCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC---CC
Q ss_conf 618999989999998543230035566788883113452138853222248999999986089624424312388---98
Q 003682 356 IDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPSLS---GA 432 (803)
Q Consensus 356 ~~~~~~~~~l~aly~~adv~v~tS~~Eg~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~l~---~~ 432 (803)
.+.++.+++..+|+.||+++.||..||++++.+|||+| |.|+|+|+.+|..+.+. .|
T Consensus 72 -~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~-------------------g~pvi~s~~~~~~e~i~~~~~g 131 (166)
T d2f9fa1 72 -LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMAS-------------------GKPVIAVNEGGFKETVINEKTG 131 (166)
T ss_dssp -EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHT-------------------TCCEEEESSHHHHHHCCBTTTE
T ss_pred -EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-------------------CCCCEEECCCCCEEEECCCCCC
T ss_conf -42122111222222222233212211233221101122-------------------3322055278640330488412
Q ss_pred CEECCCCHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 0528999899999999993799999999
Q 003682 433 IRVNPWNIDAVAEAMDSALGVSDAEKQM 460 (803)
Q Consensus 433 ~lvnP~d~~~~a~ai~~aL~~~~~er~~ 460 (803)
+.+++ |+++++++|.+++.++...++.
T Consensus 132 ~~~~~-d~~~~~~~i~~l~~~~~~~~~~ 158 (166)
T d2f9fa1 132 YLVNA-DVNEIIDAMKKVSKNPDKFKKD 158 (166)
T ss_dssp EEECS-CHHHHHHHHHHHHHCTTTTHHH
T ss_pred CCCCC-CHHHHHHHHHHHHHCHHHHHHH
T ss_conf 46899-9999999999998099999999
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.41 E-value=2.7e-15 Score=110.73 Aligned_cols=195 Identities=14% Similarity=0.090 Sum_probs=101.8
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEECCCEEEEECCCEEE
Q ss_conf 95999943886789999999999899999999731899839999589965499986227897178118589993894227
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDW 611 (803)
Q Consensus 532 ~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~~l~liaenG~~i~~~~~~~~ 611 (803)
.||++||+||||++ . .+++++++.|+.++++|||+.-...+++.. .+.+..++|..... .+
T Consensus 2 mkli~fDlDGTLl~---e----------~~~~~a~~~Gi~~~~~tgR~~~~~~~~~~~--~v~ll~~~~~~~~~----~~ 62 (206)
T d1rkua_ 2 MEIACLDLEGVLVP---E----------IWIAFAEKTGIDALKATTRDIPDYDVLMKQ--RLRILDEHGLKLGD----IQ 62 (206)
T ss_dssp CEEEEEESBTTTBC---C----------HHHHHHHHHTCGGGGCCTTTCCCHHHHHHH--HHHHHHHTTCCHHH----HH
T ss_pred CEEEEECCCCCHHH---H----------HHHHHHHHCCCHHHHHHCCCCCCHHHHHHH--HHHHHHHCCCCEEH----HH
T ss_conf 57999868655199---9----------999999985989899877999888999999--99999717873003----56
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCC--EEEEECCEE
Q ss_conf 860688880189999999999840599725841343289741047976113449999999999861899--099887909
Q 003682 612 ETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEP--VSVKSGPNI 689 (803)
Q Consensus 612 ~~~~~~~~~~~~~~~~~il~~~~~~~~gs~ie~k~~~~~~~~~~~d~~~~~~~a~~l~~~l~~~l~~~~--~~v~~g~~~ 689 (803)
.......... ........... +... ......+. .............. .........
T Consensus 63 ~~~~~~~~~~---~~~~~~~~~~~---~~~~----~~~s~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~ 120 (206)
T d1rkua_ 63 EVIATLKPLE---GAVEFVDWLRE---RFQV----VILSDTFY------------EFSQPLMRQLGFPTLLCHKLEIDDS 120 (206)
T ss_dssp HHHTTCCCCT---THHHHHHHHHT---TSEE----EEEEEEEH------------HHHHHHHHHTTCCCEEEEEEEECTT
T ss_pred HHHHHCCCCC---HHHHHHHHHHC---CCEE----EEECCCCH------------HHHHHHHHHHCCCHHHCCEEEEECC
T ss_conf 5542025562---48899988604---7468----88516713------------8888999984783333110256214
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCC----CCCCEE
Q ss_conf 9999399999999999999754479994629999099003999998024028999999850589992798----862406
Q 003682 690 VEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKY 765 (803)
Q Consensus 690 iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~----~s~A~~ 765 (803)
....+....|+......++++ ++++++++||||+.||++||+.||. +|+++.. +..|+|
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~---~i~~~eviaiGDg~NDi~Ml~~Ag~--------------gIAmna~~~v~~~~~~~ 183 (206)
T d1rkua_ 121 DRVVGYQLRQKDPKRQSVIAF---KSLYYRVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQF 183 (206)
T ss_dssp SCEEEEECCSSSHHHHHHHHH---HHTTCEEEEEECSSTTHHHHHHSSE--------------EEEESCCHHHHHHCTTS
T ss_pred CCCCCCCCCCHHHHHHHHHHH---CCCCCCEEEECCCCCCHHHHHHCCC--------------CEEECCCHHHHHHCCCC
T ss_conf 445432112014578899986---4256521884387327999985894--------------09978977999867895
Q ss_pred E-ECCHHHHHHHHHHHHHHH
Q ss_conf 8-099759999999989730
Q 003682 766 Y-LDDTAEILRMLLGLAEAS 784 (803)
Q Consensus 766 ~-i~~~~ev~~~L~~l~~~~ 784 (803)
. .++.+++.+.|.+..+.+
T Consensus 184 ~~~~~~~d~~~~~~~~~~~~ 203 (206)
T d1rkua_ 184 PAVHTYEDLKREFLKASSRS 203 (206)
T ss_dssp CEECSHHHHHHHHHHHCSSC
T ss_pred EEECCHHHHHHHHHHHHHCC
T ss_conf 56268899999999976473
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.22 E-value=7e-12 Score=89.40 Aligned_cols=206 Identities=17% Similarity=0.178 Sum_probs=101.3
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEC---CCCHHHHHHHHHCCCCCCEEECCCEEEEE-
Q ss_conf 59959999438867899999999998999999997318998399995---89965499986227897178118589993-
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVS---GKDRDTLAEWFSSCEGLGIAAEHGYFVRP- 605 (803)
Q Consensus 530 ~~~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~T---GR~~~~l~~~~~~~~~l~liaenG~~i~~- 605 (803)
|++|.|+||+||||++ ....+ +.+.++|+.| ++.|..++++| +|+...+.+.+..+ ++.+-. .-++..
T Consensus 1 M~ik~VifDlDGTL~~---~~~~i-~~a~e~i~~l-~~~g~~~~~~TN~~~~~~~~~~~~l~~~-G~~~~~--~~i~~~~ 72 (250)
T d2c4na1 1 MTIKNVICDIDGVLMH---DNVAV-PGAAEFLHGI-MDKGLPLVLLTNYPSQTGQDLANRFATA-GVDVPD--SVFYTSA 72 (250)
T ss_dssp CCCCEEEEECBTTTEE---TTEEC-TTHHHHHHHH-HHTTCCEEEEESCCSCCHHHHHHHHHHT-TCCCCG--GGEEEHH
T ss_pred CCCCEEEEECCCEEEE---CCCCC-CCHHHHHHHH-HHCCCCEEEEECCCCCCHHHHHHHHHHC-CCCCCC--EEEECHH
T ss_conf 9887999979980187---99858-2099999999-9779958999289999999998887630-356654--1673049
Q ss_pred ---------CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEE--C---------------CCEEEEEECCCCCC
Q ss_conf ---------894227860688880189999999999840599725841--3---------------43289741047976
Q 003682 606 ---------NYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIET--K---------------ESALVWNFQYADPD 659 (803)
Q Consensus 606 ---------~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~gs~ie~--k---------------~~~~~~~~~~~d~~ 659 (803)
.....+... ....+.+........+.+..+...+.. . ....... ...+..
T Consensus 73 ~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 148 (250)
T d2c4na1 73 MATADFLRRQEGKKAYVV---GEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIA-TNPDTH 148 (250)
T ss_dssp HHHHHHHHTSSCCEEEEE---CCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEE-SCCCSB
T ss_pred HHHHHHHHHHHCCCCCCC---CCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCC-CCCCCC
T ss_conf 999999986305531035---8778899999744310023552011267755425788999998742652101-354323
Q ss_pred C-C-HHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCH-HHHHHHHHC
Q ss_conf 1-1-344999999999986189909988790999993999999999999997544799946299990990-039999980
Q 003682 660 F-G-SCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVI 736 (803)
Q Consensus 660 ~-~-~~~a~~l~~~l~~~l~~~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~-nD~~Mf~~~ 736 (803)
. + ......+...+........ ...-+| +....+.+++++ |++++++++|||+. +|+.|.+.+
T Consensus 149 ~~~~~~~~g~~~~~~~~~~~~~~--------~~~~KP----~p~~~~~a~~~l---gi~p~e~v~IGD~~~~DI~~a~~a 213 (250)
T d2c4na1 149 GRGFYPACGALCAGIEKISGRKP--------FYVGKP----SPWIIRAALNKM---QAHSEETVIVGDNLRTDILAGFQA 213 (250)
T ss_dssp SSTTCBCHHHHHHHHHHHHCCCC--------EECSTT----STHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHT
T ss_pred CCCEEECCCCHHHHHHHHHCCCC--------HHCCCC----HHHHHHHHHHHH---CCCCHHEEEECCCHHHHHHHHHHC
T ss_conf 57554347625789987502100--------001342----046676666663---278034578468727799999987
Q ss_pred CHHCCCCCCCCCCCEEEEEECCC--------CCCCEEEECCHHHH
Q ss_conf 24028999999850589992798--------86240680997599
Q 003682 737 KSAAAGPSLSPVAEVFACTVGQK--------PSKAKYYLDDTAEI 773 (803)
Q Consensus 737 ~~~~a~~~~~~~~~~~~V~vG~~--------~s~A~~~i~~~~ev 773 (803)
|. ..+.|..|.. +.+++|++++..|+
T Consensus 214 G~-----------~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL 247 (250)
T d2c4na1 214 GL-----------ETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp TC-----------EEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred CC-----------CEEEECCCCCCHHHHHHCCCCCCEEECCHHHH
T ss_conf 99-----------89998999999889973789999998997893
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.21 E-value=4e-11 Score=84.68 Aligned_cols=68 Identities=19% Similarity=0.245 Sum_probs=54.4
Q ss_pred EECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECC---CCCCCEEEECC
Q ss_conf 939999999999999975447999462999909900399999802402899999985058999279---88624068099
Q 003682 693 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ---KPSKAKYYLDD 769 (803)
Q Consensus 693 ~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~---~~s~A~~~i~~ 769 (803)
...+..|+.++..+++.+ +++++++++|||+.||++|++.+|.+ |+++. .+..|+|++++
T Consensus 137 ~~~~~~~~~~~~~~~~~~---~~~~~~~i~iGDs~nDi~m~~~ag~~--------------va~na~~~lk~~Ad~vi~~ 199 (210)
T d1j97a_ 137 VLKENAKGEILEKIAKIE---GINLEDTVAVGDGANDISMFKKAGLK--------------IAFCAKPILKEKADICIEK 199 (210)
T ss_dssp SCSTTHHHHHHHHHHHHH---TCCGGGEEEEESSGGGHHHHHHCSEE--------------EEESCCHHHHTTCSEEECS
T ss_pred CCCCCCCCCHHHHHHHHH---CCCCCCEEEECCCCCHHHHHHHCCCC--------------EEECCCHHHHHHCCEEECC
T ss_conf 111234541033578884---66655417863784749999988987--------------8999899999749999917
Q ss_pred --HHHHHHHH
Q ss_conf --75999999
Q 003682 770 --TAEILRML 777 (803)
Q Consensus 770 --~~ev~~~L 777 (803)
.++|+++|
T Consensus 200 ~d~~~vl~~l 209 (210)
T d1j97a_ 200 RDLREILKYI 209 (210)
T ss_dssp SCGGGGGGGC
T ss_pred CCHHHHHHHH
T ss_conf 9999999986
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.18 E-value=3.7e-10 Score=78.62 Aligned_cols=61 Identities=20% Similarity=0.314 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEECCH-HHHHHHHHCCHHCCCCCCCCCCCEEEEEECCC--------CCCCEEEECC
Q ss_conf 99999999997544799946299990990-03999998024028999999850589992798--------8624068099
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--------PSKAKYYLDD 769 (803)
Q Consensus 699 Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~-nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~--------~s~A~~~i~~ 769 (803)
++...+++++++ |++++++++|||+. +|+.|++.+|.. .+.|..|.. +..|+|++++
T Consensus 182 ~~~~~~~~~~~~---gi~~~~~l~IGD~~~~DI~~a~~aG~~-----------si~V~~G~~~~~~~~~~~~~Pd~vi~s 247 (253)
T d1yv9a1 182 KAIIMERAIAHL---GVEKEQVIMVGDNYETDIQSGIQNGID-----------SLLVTSGFTPKSAVPTLPTPPTYVVDS 247 (253)
T ss_dssp SHHHHHHHHHHH---CSCGGGEEEEESCTTTHHHHHHHHTCE-----------EEEETTSSSCSSSTTTCSSCCSEEESS
T ss_pred CHHHHHHHHHHH---CCCCCCEEEECCCHHHHHHHHHHCCCC-----------EEEECCCCCCHHHHHHCCCCCCEEECC
T ss_conf 126787899984---888442378437827799999987998-----------999898999978897368999789799
Q ss_pred HHHH
Q ss_conf 7599
Q 003682 770 TAEI 773 (803)
Q Consensus 770 ~~ev 773 (803)
..|.
T Consensus 248 l~e~ 251 (253)
T d1yv9a1 248 LDEW 251 (253)
T ss_dssp GGGC
T ss_pred HHHC
T ss_conf 7876
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.17 E-value=6.3e-10 Score=77.18 Aligned_cols=79 Identities=15% Similarity=0.160 Sum_probs=61.2
Q ss_pred EEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCC----CCCCEEEE
Q ss_conf 99399999999999999754479994629999099003999998024028999999850589992798----86240680
Q 003682 692 VKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYL 767 (803)
Q Consensus 692 v~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~----~s~A~~~i 767 (803)
+.....+|..+++.+++++ +++++++++|||+.||++|++.++.+ ++++++ +..|+|++
T Consensus 74 ~~~~~~~K~~~l~~~~~~~---~i~~~~v~~vGDd~nDl~~l~~~g~s--------------iap~nA~~~vk~~A~~Vt 136 (177)
T d1k1ea_ 74 FFLGKLEKETACFDLMKQA---GVTAEQTAYIGDDSVDLPAFAACGTS--------------FAVADAPIYVKNAVDHVL 136 (177)
T ss_dssp EEESCSCHHHHHHHHHHHH---TCCGGGEEEEECSGGGHHHHHHSSEE--------------EECTTSCHHHHTTSSEEC
T ss_pred CCCCCCCHHHHHHHHHHHH---CCCCCEEEEECCCCCHHHHHHHCCEE--------------EECCCCCHHHHHHCCEEE
T ss_conf 1101363888999999986---67752257705884078999668928--------------984886499998589991
Q ss_pred CC---HHHHHHHHHHHHHHHCCC
Q ss_conf 99---759999999989730244
Q 003682 768 DD---TAEILRMLLGLAEASAQD 787 (803)
Q Consensus 768 ~~---~~ev~~~L~~l~~~~~~~ 787 (803)
.. ..-|.++.+.+...-.+.
T Consensus 137 ~~~GG~GavrE~~e~il~~~~~~ 159 (177)
T d1k1ea_ 137 STHGGKGAFREMSDMILQAQGKS 159 (177)
T ss_dssp SSCTTTTHHHHHHHHHHHHTTCT
T ss_pred CCCCCCCHHHHHHHHHHHHCCCH
T ss_conf 78899763999999999988970
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.16 E-value=7.4e-12 Score=89.24 Aligned_cols=66 Identities=15% Similarity=0.242 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEECC-HHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCC--------CCCCEEEECC
Q ss_conf 9999999999754479994629999099-003999998024028999999850589992798--------8624068099
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--------PSKAKYYLDD 769 (803)
Q Consensus 699 Kg~ai~~ll~~l~~~g~~~d~vl~iGD~-~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~--------~s~A~~~i~~ 769 (803)
+......+++++ |++++++++|||+ .+|+.+.+.+|.. .+.|..|.. ...++|++++
T Consensus 187 ~p~~~~~a~~~l---~~~~~~~lmVGD~~~~DI~ga~~aG~~-----------si~V~~G~~~~~~~~~~~~~PD~ii~~ 252 (261)
T d1vjra_ 187 NPLVVDVISEKF---GVPKERMAMVGDRLYTDVKLGKNAGIV-----------SILVLTGETTPEDLERAETKPDFVFKN 252 (261)
T ss_dssp STHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHHHTCE-----------EEEESSSSCCHHHHHHCSSCCSEEESS
T ss_pred CHHHHHHHHHHH---CCCCHHCCEECCCHHHHHHHHHHCCCC-----------EEEECCCCCCHHHHHHCCCCCCEEECC
T ss_conf 578888887664---047221103168716789999987996-----------999898999877886368999899889
Q ss_pred HHHHHHHHH
Q ss_conf 759999999
Q 003682 770 TAEILRMLL 778 (803)
Q Consensus 770 ~~ev~~~L~ 778 (803)
..|+.++|+
T Consensus 253 l~eL~~~l~ 261 (261)
T d1vjra_ 253 LGELAKAVQ 261 (261)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHC
T ss_conf 999999769
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.01 E-value=1.6e-10 Score=80.98 Aligned_cols=72 Identities=13% Similarity=0.158 Sum_probs=53.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCC-----CCC-CEEEECC
Q ss_conf 9999999999999754479994629999099003999998024028999999850589992798-----862-4068099
Q 003682 696 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK-----PSK-AKYYLDD 769 (803)
Q Consensus 696 ~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~-----~s~-A~~~i~~ 769 (803)
+.+|+..+..+++.+ +.+++.+++|||+.||+.|++.|+. +++++.. ... +....++
T Consensus 143 ~~~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Dl~~a~~A~~--------------~~a~~~~~~~~~~~~~~~~~~~d 205 (226)
T d2feaa1 143 SNQCGCCKPSVIHEL---SEPNQYIIMIGDSVTDVEAAKLSDL--------------CFARDYLLNECREQNLNHLPYQD 205 (226)
T ss_dssp CSCCSSCHHHHHHHH---CCTTCEEEEEECCGGGHHHHHTCSE--------------EEECHHHHHHHHHTTCCEECCSS
T ss_pred CCCCHHHHHHHHHHH---CCCCCEEEEEECCHHHHHHHHHCCE--------------EEEECCHHHHHHHCCCCEEECCC
T ss_conf 567899999999984---6788638998076313999998899--------------78706467999982998362499
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 759999999989730
Q 003682 770 TAEILRMLLGLAEAS 784 (803)
Q Consensus 770 ~~ev~~~L~~l~~~~ 784 (803)
-.++...|+.+...-
T Consensus 206 ~~~i~~~l~~~~~~~ 220 (226)
T d2feaa1 206 FYEIRKEIENVKEVQ 220 (226)
T ss_dssp HHHHHHHHHTSHHHH
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999987899
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.88 E-value=5.4e-09 Score=71.36 Aligned_cols=68 Identities=16% Similarity=0.190 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCC------CCCCEEEECCHHHHHH
Q ss_conf 9999999754479994629999099003999998024028999999850589992798------8624068099759999
Q 003682 702 VAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDDTAEILR 775 (803)
Q Consensus 702 ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~------~s~A~~~i~~~~ev~~ 775 (803)
++..+.... ..+++++++++|||+.+|+.+.+.+|. .+++|.+|.. +..|++++++..++.+
T Consensus 154 ~~~~~~~~~-~~~~~p~~~l~VGD~~~Di~aA~~aG~-----------~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~ 221 (228)
T d2hcfa1 154 ALERARRMT-GANYSPSQIVIIGDTEHDIRCARELDA-----------RSIAVATGNFTMEELARHKPGTLFKNFAETDE 221 (228)
T ss_dssp HHHHHHHHH-CCCCCGGGEEEEESSHHHHHHHHTTTC-----------EEEEECCSSSCHHHHHTTCCSEEESCSCCHHH
T ss_pred HHHHHHHHC-CCCCCHHHHEEECCCHHHHHHHHHCCC-----------EEEEECCCCCCHHHHHHCCCCEEECCHHHHHH
T ss_conf 888765300-248776680232487278999998499-----------79998079999889965899999899999999
Q ss_pred HHHHHH
Q ss_conf 999989
Q 003682 776 MLLGLA 781 (803)
Q Consensus 776 ~L~~l~ 781 (803)
+|..|.
T Consensus 222 ~l~~l~ 227 (228)
T d2hcfa1 222 VLASIL 227 (228)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999971
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.84 E-value=1e-08 Score=69.62 Aligned_cols=71 Identities=23% Similarity=0.262 Sum_probs=58.9
Q ss_pred ECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCC------CCCCEEEE
Q ss_conf 399999999999999754479994629999099003999998024028999999850589992798------86240680
Q 003682 694 PQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYL 767 (803)
Q Consensus 694 p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~------~s~A~~~i 767 (803)
+.+-.|...+..+++.+ +++++++++|||+.+|+.+.+.+|. .++.|..|.. ...|++++
T Consensus 134 ~~~~~~p~~~~~~~~~~---~~~~~~~v~VGDs~~Di~aa~~aGi-----------~~i~v~~g~~~~~~l~~~~pd~vi 199 (210)
T d2ah5a1 134 PEAPHKADVIHQALQTH---QLAPEQAIIIGDTKFDMLGARETGI-----------QKLAITWGFGEQADLLNYQPDYIA 199 (210)
T ss_dssp SSCCSHHHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTC-----------EEEEESSSSSCHHHHHTTCCSEEE
T ss_pred CCCCCCCCCCCHHHHHH---HCCCCCCEEECCCHHHHHHHHHCCC-----------EEEEECCCCCCHHHHHHCCCCEEE
T ss_conf 22222333211012332---0120016465477789999998599-----------399985798997789768999998
Q ss_pred CCHHHHHHHHH
Q ss_conf 99759999999
Q 003682 768 DDTAEILRMLL 778 (803)
Q Consensus 768 ~~~~ev~~~L~ 778 (803)
++..|+..+|+
T Consensus 200 ~~l~el~~~le 210 (210)
T d2ah5a1 200 HKPLEVLAYFQ 210 (210)
T ss_dssp SSTTHHHHHTC
T ss_pred CCHHHHHHHHC
T ss_conf 99999999859
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=98.83 E-value=3.6e-09 Score=72.47 Aligned_cols=85 Identities=21% Similarity=0.248 Sum_probs=60.9
Q ss_pred HCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEE
Q ss_conf 61899099887909999939999999999999975447999462999909900399999802402899999985058999
Q 003682 676 LANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACT 755 (803)
Q Consensus 676 l~~~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~ 755 (803)
+..++..++.+...-. .-.|......+++.+ +++++++++|||+.+|+.+.+.+|. .++.|.
T Consensus 134 l~~~f~~~~~~~~~~~----~kp~p~~~~~~~~~~---~~~~~~~~~igD~~~Di~~A~~aG~-----------~~i~v~ 195 (224)
T d2hsza1 134 IDHLFSEMLGGQSLPE----IKPHPAPFYYLCGKF---GLYPKQILFVGDSQNDIFAAHSAGC-----------AVVGLT 195 (224)
T ss_dssp CGGGCSEEECTTTSSS----CTTSSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTC-----------EEEEES
T ss_pred CHHHCCCCCCCCCCCC----CCCCCHHHHHHHHHH---HHHHHCCCHHCCCHHHHHHHHHCCC-----------EEEEEE
T ss_conf 6342143112333454----432101357899886---4311002021176989999999099-----------599991
Q ss_pred ECCC------CCCCEEEECCHHHHHHHHH
Q ss_conf 2798------8624068099759999999
Q 003682 756 VGQK------PSKAKYYLDDTAEILRMLL 778 (803)
Q Consensus 756 vG~~------~s~A~~~i~~~~ev~~~L~ 778 (803)
.|.. ...|+|++++..++.++++
T Consensus 196 ~g~~~~~~l~~~~~d~~v~~l~dL~~iie 224 (224)
T d2hsza1 196 YGYNYNIPIAQSKPDWIFDDFADILKITQ 224 (224)
T ss_dssp SSCSTTCCGGGGCCSEEESSGGGGGGGTC
T ss_pred CCCCCCCHHHHCCCCEEECCHHHHHHHHC
T ss_conf 79998340666699999899999988639
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.81 E-value=9.7e-09 Score=69.76 Aligned_cols=59 Identities=24% Similarity=0.319 Sum_probs=45.8
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCC------CCCCEEEECC
Q ss_conf 9999999999999754479994629999099003999998024028999999850589992798------8624068099
Q 003682 696 GVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK------PSKAKYYLDD 769 (803)
Q Consensus 696 ~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~------~s~A~~~i~~ 769 (803)
+..|+..++.+.+.. +++.++++||+.||++|++.+|. .|++|.. +..|+|.+.+
T Consensus 151 ~~~K~~~v~~~~~~~-----~~~~~~~vGDs~~Di~~~~~ag~--------------~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 151 SGGKGKVIKLLKEKF-----HFKKIIMIGDGATDMEACPPADA--------------FIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp TTHHHHHHHHHHHHH-----CCSCEEEEESSHHHHTTTTTSSE--------------EEEECSSCCCHHHHHHCSEEESC
T ss_pred CCHHHHHHHHHHHCC-----CCCCCEEEEECHHHHHHHHHCCC--------------EEEECCCHHHHHHHHHCCCEECC
T ss_conf 220899999998634-----86663899717865998986892--------------19979877789999868998689
Q ss_pred HHHH
Q ss_conf 7599
Q 003682 770 TAEI 773 (803)
Q Consensus 770 ~~ev 773 (803)
..++
T Consensus 212 f~el 215 (217)
T d1nnla_ 212 FVEL 215 (217)
T ss_dssp GGGG
T ss_pred HHHH
T ss_conf 8884
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=98.79 E-value=3.6e-09 Score=72.44 Aligned_cols=64 Identities=23% Similarity=0.284 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCC----CCCCEEEECCHHHHH
Q ss_conf 9999999999754479994629999099003999998024028999999850589992798----862406809975999
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEIL 774 (803)
Q Consensus 699 Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~----~s~A~~~i~~~~ev~ 774 (803)
+...++.+++++ |.+++++++|||+.+|+.+.+.+|. .++.|.+|.. ...+.|.+.+..+++
T Consensus 139 ~p~~~~~~~~~~---~~~~~~~l~VgDs~~Di~~a~~aG~-----------~~i~v~~g~~~~~~~~~~~~~i~~l~dll 204 (207)
T d2hdoa1 139 DPLPLLTALEKV---NVAPQNALFIGDSVSDEQTAQAANV-----------DFGLAVWGMDPNADHQKVAHRFQKPLDIL 204 (207)
T ss_dssp SSHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTC-----------EEEEEGGGCCTTGGGSCCSEEESSGGGGG
T ss_pred HHHHHCCCCCCE---EEECCCEEEECCCHHHHHHHHHCCC-----------EEEEEECCCCCHHHHHHCCCEECCHHHHH
T ss_conf 444300234210---4511340685477878999998499-----------29999358897567653292748999998
Q ss_pred HH
Q ss_conf 99
Q 003682 775 RM 776 (803)
Q Consensus 775 ~~ 776 (803)
++
T Consensus 205 ~l 206 (207)
T d2hdoa1 205 EL 206 (207)
T ss_dssp GG
T ss_pred HH
T ss_conf 53
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=98.75 E-value=3.9e-10 Score=78.52 Aligned_cols=59 Identities=19% Similarity=0.295 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEEECCH-HHHHHHHHCCHHCCCCCCCCCCCEEEEEECCC--------CCCCEEEECCH
Q ss_conf 9999999997544799946299990990-03999998024028999999850589992798--------86240680997
Q 003682 700 GLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK--------PSKAKYYLDDT 770 (803)
Q Consensus 700 g~ai~~ll~~l~~~g~~~d~vl~iGD~~-nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~--------~s~A~~~i~~~ 770 (803)
....+.+++++ |++++++++|||+. +|+.+.+.+|. ..+.|..|.. ...++|++++.
T Consensus 183 p~~~~~al~~l---~i~~~~~~mIGDs~~~DI~gA~~aG~-----------~si~V~~G~~~~~~~~~~~~~PD~vi~sl 248 (253)
T d1wvia_ 183 AVIMNKALDRL---GVKRHEAIMVGDNYLTDITAGIKNDI-----------ATLLVTTGFTKPEEVPALPIQPDFVLSSL 248 (253)
T ss_dssp HHHHHHHHHHH---TSCGGGEEEEESCTTTTHHHHHHTTC-----------EEEEESSSSSCTTTGGGCSSCCSEEESCG
T ss_pred CCCCEEHHHHC---CCCCCCEEEECCCHHHHHHHHHHCCC-----------CEEEECCCCCCHHHHHHCCCCCCEEECCH
T ss_conf 42001100110---34545169982780777999998799-----------79998989999788863689998898997
Q ss_pred HH
Q ss_conf 59
Q 003682 771 AE 772 (803)
Q Consensus 771 ~e 772 (803)
.|
T Consensus 249 ~e 250 (253)
T d1wvia_ 249 AE 250 (253)
T ss_dssp GG
T ss_pred HH
T ss_conf 77
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.60 E-value=1.1e-06 Score=57.03 Aligned_cols=62 Identities=10% Similarity=0.038 Sum_probs=46.4
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCCCCCCEEEECCHHHHHHHH
Q ss_conf 99999999999754479994629999099003999998024028999999850589992798862406809975999999
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRML 777 (803)
Q Consensus 698 ~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~~s~A~~~i~~~~ev~~~L 777 (803)
.|...+..+++.+ |++++++++|||+..|+...+.+|.. +|.+... . +.+++.+-+
T Consensus 99 p~~~~~~~~~~~~---~~~~~~~l~igD~~~di~aA~~aG~~-------------~i~v~~G-------~-~~~~~~~~l 154 (164)
T d1u7pa_ 99 SKVTHFERLHHKT---GVPFSQMVFFDDENRNIIDVGRLGVT-------------CIHIRDG-------M-SLQTLTQGL 154 (164)
T ss_dssp CHHHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHTTTCE-------------EEECSSC-------C-CHHHHHHHH
T ss_pred CCHHHHHHHHHHH---CCCHHHEEEECCCHHHHHHHHHCCCE-------------EEEECCC-------C-CHHHHHHHH
T ss_conf 9769999999996---88869979874878789999986997-------------9997999-------9-869999999
Q ss_pred HHHHHH
Q ss_conf 998973
Q 003682 778 LGLAEA 783 (803)
Q Consensus 778 ~~l~~~ 783 (803)
+..+.+
T Consensus 155 ~~f~~~ 160 (164)
T d1u7pa_ 155 ETFAKA 160 (164)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999886
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=98.56 E-value=6.5e-09 Score=70.85 Aligned_cols=68 Identities=12% Similarity=0.152 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHCCC-CCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCCC-----------------
Q ss_conf 99999999997544799-946299990990039999980240289999998505899927988-----------------
Q 003682 699 KGLVAQHQLETMHQKGM-LPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP----------------- 760 (803)
Q Consensus 699 Kg~ai~~ll~~l~~~g~-~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~~----------------- 760 (803)
........++++ ++ +++++++|||+.+|+.+.+.+|. .+++|..|...
T Consensus 158 ~p~~~~~~~~~l---~~~p~~~~v~VgDs~~Di~aA~~aG~-----------~ti~v~~G~~~~~~~~~~~~~~~~~~~~ 223 (257)
T d1swva_ 158 YPWMCYKNAMEL---GVYPMNHMIKVGDTVSDMKEGRNAGM-----------WTVGVILGSSELGLTEEEVENMDSVELR 223 (257)
T ss_dssp SSHHHHHHHHHH---TCCSGGGEEEEESSHHHHHHHHHTTS-----------EEEEECTTCTTTCCCHHHHHHSCHHHHH
T ss_pred CHHHHHHHHHHH---CCCCCCEEEEEECCHHHHHHHHHCCC-----------EEEEECCCCCCCCCCHHHHHHCCHHHHH
T ss_conf 817789999995---89876518999687340899998799-----------8999813777789898998627999999
Q ss_pred ------------CCCEEEECCHHHHHHHHHHH
Q ss_conf ------------62406809975999999998
Q 003682 761 ------------SKAKYYLDDTAEILRMLLGL 780 (803)
Q Consensus 761 ------------s~A~~~i~~~~ev~~~L~~l 780 (803)
..|+|++++..|+..+|+.+
T Consensus 224 ~~~~~~~~~l~~~gad~vi~~l~eL~~ii~~~ 255 (257)
T d1swva_ 224 EKIEVVRNRFVENGAHFTIETMQELESVMEHI 255 (257)
T ss_dssp HHHHHHHHHHHHTTCSEEESSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEECCHHHHHHHHHHH
T ss_conf 99999999997479989987999999999997
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=98.56 E-value=7.5e-08 Score=64.24 Aligned_cols=172 Identities=12% Similarity=0.069 Sum_probs=98.2
Q ss_pred CCEEEEEECCCCCCCCCC-----CCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEECCCEEEEE
Q ss_conf 995999943886789999-----999999899999999731899839999589965499986227897178118589993
Q 003682 531 KNRAILLDYDGTIMVPGS-----ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRP 605 (803)
Q Consensus 531 ~~klii~DlDGTL~~~~~-----~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~~l~liaenG~~i~~ 605 (803)
.++.+|||.||||....+ .+-.+-+.+.++|+.| ++.|..++++|..+.-..
T Consensus 1 ~~~Av~~DrDGtl~~~~~y~~~~~~~~~~~gv~e~l~~L-~~~g~~~~ivTNq~~i~~---------------------- 57 (182)
T d2gmwa1 1 SVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMREL-KKMGFALVVVTNQSGIAR---------------------- 57 (182)
T ss_dssp CBCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHH-HHTTCEEEEEEECTHHHH----------------------
T ss_pred CCCEEEEECCCCCCCCCCCCCCHHHEEECCCHHHHHHHH-HHCCCHHHHHHCCCHHHH----------------------
T ss_conf 998899948998548899899889936887899999998-661841666642202355----------------------
Q ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 89422786068888018999999999984059972584134328974104797611344999999999986189909988
Q 003682 606 NYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKS 685 (803)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~gs~ie~k~~~~~~~~~~~d~~~~~~~a~~l~~~l~~~l~~~~~~v~~ 685 (803)
+...+ .........+...+... +.. . ....+.....+..... +...
T Consensus 58 -~~~~~--------~~~~~~~~~~~~~~~~~--~~~--~--~~~~~cp~~p~~~~~~-------------~~~~------ 103 (182)
T d2gmwa1 58 -GKFTE--------AQFETLTEWMDWSLADR--DVD--L--DGIYYCPHHPQGSVEE-------------FRQV------ 103 (182)
T ss_dssp -TSSCH--------HHHHHHHHHHHHHHHHT--TCC--C--SEEEEECCBTTCSSGG-------------GBSC------
T ss_pred -HHHHH--------HHHHHHHHHHHHHHHHH--CCC--C--CCEEECCCCCCCCCCC-------------CCCC------
T ss_conf -66678--------76540101244555540--134--4--5405655333466553-------------3345------
Q ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCCC-----
Q ss_conf 790999993999999999999997544799946299990990039999980240289999998505899927988-----
Q 003682 686 GPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP----- 760 (803)
Q Consensus 686 g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~~----- 760 (803)
+.--+| +...+..+++.+ +++++++++|||+.+|+.+.+.+|.. ..+.|..|...
T Consensus 104 ---~~~rKP----~p~m~~~~~~~~---~i~~~~s~mVGDs~~Di~aA~~Ag~~----------~~~lv~~g~~~~~~~~ 163 (182)
T d2gmwa1 104 ---CDCRKP----HPGMLLSARDYL---HIDMAASYMVGDKLEDMQAAVAANVG----------TKVLVRTGKPITPEAE 163 (182)
T ss_dssp ---CSSSTT----SCHHHHHHHHHH---TBCGGGCEEEESSHHHHHHHHHTTCS----------EEEEESSSSCCCHHHH
T ss_pred ---CCCCCC----CCCCCCCHHHHC---CCCCCCCCCCCCCHHHHHHHHHHCCC----------CEEEECCCCCCCCCCC
T ss_conf ---555687----432231012211---65534451227989999999982888----------4799899977772102
Q ss_pred CCCEEEECCHHHHHHHHHH
Q ss_conf 6240680997599999999
Q 003682 761 SKAKYYLDDTAEILRMLLG 779 (803)
Q Consensus 761 s~A~~~i~~~~ev~~~L~~ 779 (803)
..|+|++++..++.++|++
T Consensus 164 ~~ad~v~~~l~dl~~~ikk 182 (182)
T d2gmwa1 164 NAADWVLNSLADLPQAIKK 182 (182)
T ss_dssp HHCSEEESCGGGHHHHHHC
T ss_pred CCCCEEECCHHHHHHHHCC
T ss_conf 4798898999999999639
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=98.56 E-value=2e-07 Score=61.59 Aligned_cols=177 Identities=18% Similarity=0.208 Sum_probs=96.5
Q ss_pred HCCCEEEEEECCCCCCCCCC-----CCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEECCCEEE
Q ss_conf 15995999943886789999-----9999998999999997318998399995899654999862278971781185899
Q 003682 529 RTKNRAILLDYDGTIMVPGS-----ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFV 603 (803)
Q Consensus 529 ~~~~klii~DlDGTL~~~~~-----~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~~l~liaenG~~i 603 (803)
..+++.+|||.||||..... .+-.+-+.+.++|++| ++.|..++|+|..+-- + .|.+
T Consensus 20 p~~~~Aif~DrDGtl~~~~~y~~~~~~~~l~pgv~e~L~~L-~~~G~~l~IvTNQ~gi------~----------~g~~- 81 (209)
T d2o2xa1 20 PPHLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATA-NRAGIPVVVVTNQSGI------A----------RGYF- 81 (209)
T ss_dssp CSSCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHH-HHHTCCEEEEEECHHH------H----------TTSC-
T ss_pred CCCCCEEEEECCCCEECCCCCCCCHHHEEECCCHHHHHHHH-HHHCCEEEEECCCCCC------H----------HHHH-
T ss_conf 88797899959997478899999999927634489999999-8629757986165432------1----------4454-
Q ss_pred EECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECC-CCCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 9389422786068888018999999999984059972584134328974104-797611344999999999986189909
Q 003682 604 RPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQY-ADPDFGSCQAKELLDHLESVLANEPVS 682 (803)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~gs~ie~k~~~~~~~~~~-~d~~~~~~~a~~l~~~l~~~l~~~~~~ 682 (803)
.+ .........+.+.+.. .|.++.. .....+... ..+... .+..
T Consensus 82 ------~~--------~~~~~~~~~~~~~l~~--~g~~~~~--~~~~~~~~~~~~~~~~---------------~~~~-- 126 (209)
T d2o2xa1 82 ------GW--------SAFAAVNGRVLELLRE--EGVFVDM--VLACAYHEAGVGPLAI---------------PDHP-- 126 (209)
T ss_dssp ------CH--------HHHHHHHHHHHHHHHH--TTCCCSE--EEEECCCTTCCSTTCC---------------SSCT--
T ss_pred ------HH--------HHHHHHHHHHHHHHHH--CCCCCCE--EEEECCCCCCCCCCCC---------------CCCC--
T ss_conf ------24--------3444433677777664--1355325--8874246445664212---------------3664--
Q ss_pred EEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 98879099999399999999999999754479994629999099003999998024028999999850589992798862
Q 003682 683 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSK 762 (803)
Q Consensus 683 v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~~s~ 762 (803)
--+| +...+..+++.+ +++++++++|||+.+|+.+.+.+|.. .+.+..|.....
T Consensus 127 --------~rKP----~p~ml~~a~~~~---~i~~~~~~~VGD~~~Di~aA~~AGi~-----------~i~v~~g~~~~~ 180 (209)
T d2o2xa1 127 --------MRKP----NPGMLVEAGKRL---ALDLQRSLIVGDKLADMQAGKRAGLA-----------QGWLVDGEAAVQ 180 (209)
T ss_dssp --------TSTT----SCHHHHHHHHHH---TCCGGGCEEEESSHHHHHHHHHTTCS-----------EEEEETCCCEEE
T ss_pred --------CCCC----CCHHHHHHHHHH---CCCCCCEEEECCCHHHHHHHHHCCCC-----------EEEEECCCCCCC
T ss_conf --------0243----201566767773---89941268957978899999987994-----------899948997656
Q ss_pred CE---EEECCHHHHHHHHHHHHHHH
Q ss_conf 40---68099759999999989730
Q 003682 763 AK---YYLDDTAEILRMLLGLAEAS 784 (803)
Q Consensus 763 A~---~~i~~~~ev~~~L~~l~~~~ 784 (803)
.. ..+.+..++.++++.+-...
T Consensus 181 ~~~~~~~~~~~~e~~dll~~v~~l~ 205 (209)
T d2o2xa1 181 PGFAIRPLRDSSELGDLLAAIETLG 205 (209)
T ss_dssp TTEEEEEESSHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 7755467630527879999999998
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.53 E-value=1.3e-06 Score=56.40 Aligned_cols=73 Identities=14% Similarity=0.109 Sum_probs=56.1
Q ss_pred CCCH--HHHHHHHHHHHHHCCCCCCCEEEEECCH-HHHHHHHHCCHHCCCCCCCCCCCEEEEEECC------CCCCCEEE
Q ss_conf 9999--9999999997544799946299990990-0399999802402899999985058999279------88624068
Q 003682 696 GVNK--GLVAQHQLETMHQKGMLPDFVLCIGDDR-SDEDMFEVIKSAAAGPSLSPVAEVFACTVGQ------KPSKAKYY 766 (803)
Q Consensus 696 ~~~K--g~ai~~ll~~l~~~g~~~d~vl~iGD~~-nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~------~~s~A~~~ 766 (803)
+..| ....+.+++.+ |++++++++|||+. +|+.+.+.+|.. ...+..+. ....++|+
T Consensus 161 ~~~KP~p~~~~~~~~~~---~~~~~~~l~iGD~~~~Di~~A~~~G~~-----------~~~~~~~~~~~~~~~~~~p~~~ 226 (247)
T d2gfha1 161 KEEKPAPSIFYHCCDLL---GVQPGDCVMVGDTLETDIQGGLNAGLK-----------ATVWINKSGRVPLTSSPMPHYM 226 (247)
T ss_dssp SSCTTCHHHHHHHHHHH---TCCGGGEEEEESCTTTHHHHHHHTTCS-----------EEEEECTTCCCCSSCCCCCSEE
T ss_pred CCCHHHHHHHHHHHHHH---HCCHHHCCEECCCHHHHHHHHHHCCCE-----------EEEEECCCCCCCCCCCCCCCEE
T ss_conf 21003332478899996---028775242035718679999983994-----------9999779988764335799989
Q ss_pred ECCHHHHHHHHHHHHH
Q ss_conf 0997599999999897
Q 003682 767 LDDTAEILRMLLGLAE 782 (803)
Q Consensus 767 i~~~~ev~~~L~~l~~ 782 (803)
+.+..++.++|+.+-.
T Consensus 227 i~~l~eL~~ll~~i~~ 242 (247)
T d2gfha1 227 VSSVLELPALLQSIDC 242 (247)
T ss_dssp ESSGGGHHHHHHHHTT
T ss_pred ECCHHHHHHHHHHHHH
T ss_conf 8999999999999865
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=98.49 E-value=3.3e-08 Score=66.48 Aligned_cols=64 Identities=16% Similarity=0.113 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHH
Q ss_conf 99999999997544799946299990990039999980240289999998505899927988624068099759999999
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKPSKAKYYLDDTAEILRMLL 778 (803)
Q Consensus 699 Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~~s~A~~~i~~~~ev~~~L~ 778 (803)
+....+.+++.+ +++++++++|||+.+|+.+.+.+|. -+|.+......+++.+.+..++.++++
T Consensus 139 ~~~~~~~~~~~~---~~~p~~~l~VgD~~~Di~~A~~~G~-------------~~i~v~~~~~~~~~~~~~~~dl~~l~~ 202 (204)
T d2go7a1 139 SPEAATYLLDKY---QLNSDNTYYIGDRTLDVEFAQNSGI-------------QSINFLESTYEGNHRIQALADISRIFE 202 (204)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHHTC-------------EEEESSCCSCTTEEECSSTTHHHHHTS
T ss_pred HHHHHHHHHHHH---CCCCCEEEEEECCHHHHHHHHHCCC-------------EEEEECCCCCCCCEECCCHHHHHHHHC
T ss_conf 578889999982---9997518999479899999998699-------------699984799995800489989999864
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=98.38 E-value=2.6e-07 Score=60.86 Aligned_cols=51 Identities=22% Similarity=0.270 Sum_probs=41.3
Q ss_pred HCCCEEEEEECCCCCCCCCCC---------CCCCCHHHHHHHHHHHCCCCCEEEEECCCCH
Q ss_conf 159959999438867899999---------9999989999999973189983999958996
Q 003682 529 RTKNRAILLDYDGTIMVPGSI---------STSPNAEAVAILDNLCRDPKNVVFLVSGKDR 580 (803)
Q Consensus 529 ~~~~klii~DlDGTL~~~~~~---------~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~ 580 (803)
.++.|.++||+||||++.... ...+-+.+.+.|+.| .+.|..++++|||+.
T Consensus 4 ~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l-~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 4 PGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMY-ALMGYQIVVVSGRES 63 (149)
T ss_dssp TTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHH-HHTTCEEEEEECSCC
T ss_pred CCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHCCCEEEEEECCCH
T ss_conf 999968999748883827898757733304084487899999999-844480899926857
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.38 E-value=2.9e-08 Score=66.83 Aligned_cols=68 Identities=13% Similarity=0.178 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEECC-HHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCC----CCCCEEEECCHHHH
Q ss_conf 9999999999754479994629999099-003999998024028999999850589992798----86240680997599
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDD-RSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLDDTAEI 773 (803)
Q Consensus 699 Kg~ai~~ll~~l~~~g~~~d~vl~iGD~-~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~----~s~A~~~i~~~~ev 773 (803)
++...+.+++++ |+++++++.|||+ .+|+.+.+.+|.. ++.+..+.. ...++|++.+..++
T Consensus 157 ~~~~~~~~~~~l---~~~p~~~l~vgD~~~~Di~~A~~~G~~-----------~v~v~~~~~~~~~~~~~d~~i~~l~el 222 (230)
T d1x42a1 157 HPRIFELALKKA---GVKGEEAVYVGDNPVKDCGGSKNLGMT-----------SILLDRKGEKREFWDKCDFIVSDLREV 222 (230)
T ss_dssp SHHHHHHHHHHH---TCCGGGEEEEESCTTTTHHHHHTTTCE-----------EEEECTTSCCGGGGGGSSEEESSTTHH
T ss_pred HHHHHHHHHHHH---CCCCCCCCEEECCCHHHHHHHHHCCCE-----------EEEECCCCCCCCCCCCCCEEECCHHHH
T ss_conf 357788777640---664312645621748679999985998-----------999889998701045899998899999
Q ss_pred HHHHHHH
Q ss_conf 9999998
Q 003682 774 LRMLLGL 780 (803)
Q Consensus 774 ~~~L~~l 780 (803)
.++|++|
T Consensus 223 ~~~l~~l 229 (230)
T d1x42a1 223 IKIVDEL 229 (230)
T ss_dssp HHHHHHH
T ss_pred HHHHHHC
T ss_conf 9999970
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=98.35 E-value=5.2e-06 Score=52.73 Aligned_cols=82 Identities=17% Similarity=0.132 Sum_probs=60.0
Q ss_pred CCCEEEEECCEEEEEEECCCCH--HHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEE
Q ss_conf 8990998879099999399999--99999999975447999462999909900399999802402899999985058999
Q 003682 678 NEPVSVKSGPNIVEVKPQGVNK--GLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACT 755 (803)
Q Consensus 678 ~~~~~v~~g~~~iev~p~~~~K--g~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~ 755 (803)
.....++.+... +..| .....++++.+ |++++++++|||+.+|+...+.+|.. +|.
T Consensus 132 ~~fd~v~~s~~~------~~~KP~p~~f~~a~~~l---g~~p~e~l~VgD~~~di~~A~~aG~~-------------tv~ 189 (245)
T d1qq5a_ 132 DSFDAVISVDAK------RVFKPHPDSYALVEEVL---GVTPAEVLFVSSNGFDVGGAKNFGFS-------------VAR 189 (245)
T ss_dssp GGCSEEEEGGGG------TCCTTSHHHHHHHHHHH---CCCGGGEEEEESCHHHHHHHHHHTCE-------------EEE
T ss_pred CCCCCCCCCCCC------CCCCCCHHHHHHHHHHH---CCCHHHEEEEECCHHHHHHHHHCCCE-------------EEE
T ss_conf 222222322222------34686389999999991---97843389993899999999986992-------------999
Q ss_pred ECC------------------------------CCCCCEEEECCHHHHHHHHHHHH
Q ss_conf 279------------------------------88624068099759999999989
Q 003682 756 VGQ------------------------------KPSKAKYYLDDTAEILRMLLGLA 781 (803)
Q Consensus 756 vG~------------------------------~~s~A~~~i~~~~ev~~~L~~l~ 781 (803)
+.. ....+++++.+..++.++++.++
T Consensus 190 v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~lv~~~~ 245 (245)
T d1qq5a_ 190 VARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVRGMA 245 (245)
T ss_dssp ECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHHHHHC
T ss_pred ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHC
T ss_conf 84788654221224443454012110000355425899999899999999998519
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.32 E-value=7.8e-08 Score=64.11 Aligned_cols=70 Identities=17% Similarity=0.193 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCCC----------CCCEEEEC
Q ss_conf 99999999997544799946299990990039999980240289999998505899927988----------62406809
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP----------SKAKYYLD 768 (803)
Q Consensus 699 Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~~----------s~A~~~i~ 768 (803)
+......+++++ +++++++++|||+..|+.+.+.+|. .+++|+.|... ..|+++++
T Consensus 143 ~~~~~~~~~~~l---~~~p~~~l~vgDs~~dv~aA~~aG~-----------~~i~v~~~~~~~~~~~~~l~~~~ad~vi~ 208 (222)
T d2fdra1 143 KPDIFLHGAAQF---GVSPDRVVVVEDSVHGIHGARAAGM-----------RVIGFTGASHTYPSHADRLTDAGAETVIS 208 (222)
T ss_dssp SSHHHHHHHHHH---TCCGGGEEEEESSHHHHHHHHHTTC-----------EEEEECCSTTCCTTHHHHHHHHTCSEEES
T ss_pred CHHHHHHHHHHH---CCCCCEEEEECCCHHHHHHHHHCCC-----------EEEEECCCCCCCCCHHHHHHHCCCCEEEC
T ss_conf 889998778750---8987328997587878999998499-----------89998369878753177897679999999
Q ss_pred CHHHHHHHHHHHHH
Q ss_conf 97599999999897
Q 003682 769 DTAEILRMLLGLAE 782 (803)
Q Consensus 769 ~~~ev~~~L~~l~~ 782 (803)
+..++..+|..|+.
T Consensus 209 ~l~eL~~ll~~l~~ 222 (222)
T d2fdra1 209 RMQDLPAVIAAMAE 222 (222)
T ss_dssp CGGGHHHHHHHHTC
T ss_pred CHHHHHHHHHHHCC
T ss_conf 99999999998509
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=98.31 E-value=8e-09 Score=70.30 Aligned_cols=80 Identities=14% Similarity=0.086 Sum_probs=55.6
Q ss_pred HCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEE
Q ss_conf 61899099887909999939999999999999975447999462999909900399999802402899999985058999
Q 003682 676 LANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACT 755 (803)
Q Consensus 676 l~~~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~ 755 (803)
+.+++..++.+...-.-+| +....+.+++++ +++++++++|||+.+|+.+.+.+|. .++.|.
T Consensus 127 l~~~F~~i~~~~~~~~~Kp----~~~~~~~~~~~l---~~~~~~~l~igD~~~di~aA~~~G~-----------~~i~v~ 188 (218)
T d1te2a_ 127 LRDSFDALASAEKLPYSKP----HPQVYLDCAAKL---GVDPLTCVALEDSVNGMIASKAARM-----------RSIVVP 188 (218)
T ss_dssp CGGGCSEEEECTTSSCCTT----STHHHHHHHHHH---TSCGGGEEEEESSHHHHHHHHHTTC-----------EEEECC
T ss_pred CCCCCCCCCCCCCCCCCHH----HHHHHHHHHHHC---CCCCHHCEEEEECHHHHHHHHHCCC-----------EEEEEC
T ss_conf 3322222223232221014----578999999972---9995130899609899999998399-----------799989
Q ss_pred ECCC-----CCCCEEEECCHHHH
Q ss_conf 2798-----86240680997599
Q 003682 756 VGQK-----PSKAKYYLDDTAEI 773 (803)
Q Consensus 756 vG~~-----~s~A~~~i~~~~ev 773 (803)
.+.. ...|++.+++..|+
T Consensus 189 ~~~~~~~~~~~~a~~~i~~l~el 211 (218)
T d1te2a_ 189 APEAQNDPRFVLANVKLSSLTEL 211 (218)
T ss_dssp CTTTTTCGGGGGSSEECSCGGGC
T ss_pred CCCCCCCHHHCCCCEEECCHHHC
T ss_conf 98776662235899998992669
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=98.11 E-value=5e-06 Score=52.81 Aligned_cols=66 Identities=11% Similarity=0.144 Sum_probs=50.9
Q ss_pred CCCCHH--HHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEEC--C-----CCCCCEE
Q ss_conf 999999--999999997544799946299990990039999980240289999998505899927--9-----8862406
Q 003682 695 QGVNKG--LVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG--Q-----KPSKAKY 765 (803)
Q Consensus 695 ~~~~Kg--~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG--~-----~~s~A~~ 765 (803)
.+..|. ...+.+++++ |++++++++|||+..|+...+.+|.. +|.+. . ....|+|
T Consensus 145 ~~~~KP~p~~~~~~~~~~---g~~p~e~l~VgD~~~Di~~A~~aG~~-------------~v~v~r~~~~~~~~~~~~d~ 208 (220)
T d1zrna_ 145 VQVYKPDNRVYELAEQAL---GLDRSAILFVASNAWDATGARYFGFP-------------TCWINRTGNVFEEMGQTPDW 208 (220)
T ss_dssp GTCCTTSHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHHTCC-------------EEEECTTCCCCCSSSCCCSE
T ss_pred EECCCCHHHHHHHHHHHH---CCCCCEEEEEECCHHHHHHHHHCCCE-------------EEEECCCCCCCCCCCCCCCE
T ss_conf 001450778899999981---77871489980483769999986997-------------99981799876433689999
Q ss_pred EECCHHHHHHH
Q ss_conf 80997599999
Q 003682 766 YLDDTAEILRM 776 (803)
Q Consensus 766 ~i~~~~ev~~~ 776 (803)
.+++..++.++
T Consensus 209 ~i~~l~el~~l 219 (220)
T d1zrna_ 209 EVTSLRAVVEL 219 (220)
T ss_dssp EESSHHHHHTT
T ss_pred EECCHHHHHHH
T ss_conf 98999999854
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=97.93 E-value=4.2e-08 Score=65.78 Aligned_cols=83 Identities=13% Similarity=0.169 Sum_probs=51.7
Q ss_pred CCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEEC
Q ss_conf 89909988790999993999999999999997544799946299990990039999980240289999998505899927
Q 003682 678 NEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVG 757 (803)
Q Consensus 678 ~~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG 757 (803)
++...++.+....--+| +....+.+++.+ |++++++++|||+.+|+.+.+.+|. -+|.++
T Consensus 130 ~~f~~i~~~~~~~~~KP----~~~~~~~~l~~~---~i~~~~~l~VgD~~~di~~A~~aG~-------------~~i~v~ 189 (221)
T d1o08a_ 130 GYFDAIADPAEVAASKP----APDIFIAAAHAV---GVAPSESIGLEDSQAGIQAIKDSGA-------------LPIGVG 189 (221)
T ss_dssp GGCSEECCTTTSSSCTT----STHHHHHHHHHT---TCCGGGEEEEESSHHHHHHHHHHTC-------------EEEEES
T ss_pred CCCCCCCCCCCCCCCCC----CHHHHHHHHHHC---CCCCCEEEEEECCHHHHHHHHHCCC-------------EEEEEC
T ss_conf 43331111111111235----758888889873---9887407999669888999998699-------------899999
Q ss_pred C--CCCCCEEEECCHHH-HHHHHHHH
Q ss_conf 9--88624068099759-99999998
Q 003682 758 Q--KPSKAKYYLDDTAE-ILRMLLGL 780 (803)
Q Consensus 758 ~--~~s~A~~~i~~~~e-v~~~L~~l 780 (803)
. ....+...+.+..+ ..+.|..|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~l~el 215 (221)
T d1o08a_ 190 RPEDLGDDIVIVPDTSHYTLEFLKEV 215 (221)
T ss_dssp CHHHHCSSSEEESSGGGCCHHHHHHH
T ss_pred CHHHCCCCCEECCCCCCCCHHHHHHH
T ss_conf 81124656477588450789899999
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.87 E-value=0.00031 Score=41.63 Aligned_cols=56 Identities=14% Similarity=0.159 Sum_probs=45.8
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCC
Q ss_conf 95999943886789999999999899999999731899839999589965499986227
Q 003682 532 NRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 532 ~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~ 590 (803)
...+++|-+||++.. ....+.+...++++.| ++.|+.++++||........+...+
T Consensus 3 ~~~~~~d~~~~~~~g--~~D~lr~~a~~~I~~L-~~~Gi~v~ilTGD~~~~a~~ia~~l 58 (135)
T d2b8ea1 3 VTAVIFDKTGTLTKG--KPDTLKESAKPAVQEL-KRMGIKVGMITGDNWRSAEAISREL 58 (135)
T ss_dssp CCEEEEECCCCCBCS--CCCCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred EEEEEECCCEEEEEE--CCCCCCCCHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHH
T ss_conf 899999891479973--6889981199999999-9859979997586335556777654
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=97.86 E-value=1.1e-05 Score=50.76 Aligned_cols=135 Identities=16% Similarity=0.217 Sum_probs=74.4
Q ss_pred CCEEEEEECCCCCCCCCCC--------CCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEECCCEE
Q ss_conf 9959999438867899999--------99999899999999731899839999589965499986227897178118589
Q 003682 531 KNRAILLDYDGTIMVPGSI--------STSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYF 602 (803)
Q Consensus 531 ~~klii~DlDGTL~~~~~~--------~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~~l~liaenG~~ 602 (803)
.+|.+|||.||||...... .-.+.|.+.++|+.| ++.|..++++|..+--.
T Consensus 1 ~~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-~~~g~~l~i~TNq~~ia-------------------- 59 (161)
T d2fpwa1 1 SQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKL-QKAGYKLVMITNQDGLG-------------------- 59 (161)
T ss_dssp CCEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHH-HHTTEEEEEEEECTTTT--------------------
T ss_pred CCCEEEEECCCCEEEECCCCCCCCCHHHCEECCCHHHHHHHH-HHCCCCEEEECCCCCCH--------------------
T ss_conf 981999918897673579887428889906875599999999-87387301104643003--------------------
Q ss_pred EEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 99389422786068888018999999999984059972584134328974104797611344999999999986189909
Q 003682 603 VRPNYGVDWETCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVS 682 (803)
Q Consensus 603 i~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~gs~ie~k~~~~~~~~~~~d~~~~~~~a~~l~~~l~~~l~~~~~~ 682 (803)
.+ .+ . ..........+.+.+.. .+... ....+..|....+ ..
T Consensus 60 ---~~--~~----~--~~~~~~~~~~l~~~l~~--~~~~~--~~i~~~~~~~~~~---------------------~~-- 101 (161)
T d2fpwa1 60 ---TQ--SF----P--QADFDGPHNLMMQIFTS--QGVQF--DEVLICPHLPADE---------------------CD-- 101 (161)
T ss_dssp ---ST--TS----C--HHHHHHHHHHHHHHHHH--TTCCE--EEEEEECCCGGGC---------------------CS--
T ss_pred ---HH--HH----H--HHHHHHHHHHHHHHCCC--CCCCC--CEEEECCCCCCCC---------------------CC--
T ss_conf ---67--77----7--87765454300010012--33333--1066414313454---------------------23--
Q ss_pred EEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHH
Q ss_conf 988790999993999999999999997544799946299990990039999980240
Q 003682 683 VKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSA 739 (803)
Q Consensus 683 v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~ 739 (803)
--+| ....+..+++++ +++++++++|||+..|+.+.+.+|..
T Consensus 102 --------~~KP----~p~~~~~~~~~~---~id~~~~~~IGD~~~Di~aA~~aG~~ 143 (161)
T d2fpwa1 102 --------CRKP----KVKLVERYLAEQ---AMDRANSYVIGDRATDIQLAENMGIN 143 (161)
T ss_dssp --------SSTT----SSGGGGGGC-------CCGGGCEEEESSHHHHHHHHHHTSE
T ss_pred --------CCCC----CCHHHHHHHHHC---CCCHHCEEEECCCHHHHHHHHHCCCE
T ss_conf --------3364----218999998761---98940489989989999999986990
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.76 E-value=2.9e-05 Score=48.06 Aligned_cols=56 Identities=16% Similarity=0.119 Sum_probs=41.6
Q ss_pred HCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCH
Q ss_conf 618990998879099999399999999999999754479994629999099003999998024
Q 003682 676 LANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 676 l~~~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~ 738 (803)
+.++...++.+...-.-+| +......+++++ +++++++++|||+..|+.+.+.+|.
T Consensus 140 l~~~fd~i~~s~~~~~~KP----~p~~~~~~~~~~---~v~p~~~l~IgD~~~Di~~A~~aG~ 195 (222)
T d1cr6a1 140 LSQHFDFLIESCQVGMIKP----EPQIYNFLLDTL---KAKPNEVVFLDDFGSNLKPARDMGM 195 (222)
T ss_dssp HGGGCSEEEEHHHHSCCTT----CHHHHHHHHHHH---TSCTTSEEEEESSSTTTHHHHHHTC
T ss_pred HHHHHCEEEEHHHCCCCCC----CHHHHHHHHHHH---CCCCCEEEEEECCHHHHHHHHHCCC
T ss_conf 0755111000544137799----827777888872---8986328999779887999998599
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.59 E-value=3.2e-05 Score=47.82 Aligned_cols=162 Identities=16% Similarity=0.059 Sum_probs=75.4
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEECCCEEEEECCCE
Q ss_conf 59959999438867899999999998999999997318998399995899654999862278971781185899938942
Q 003682 530 TKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGV 609 (803)
Q Consensus 530 ~~~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~~l~liaenG~~i~~~~~~ 609 (803)
|+++.++||+||||++. .+....+++++.+..|.. .+.......++.. .. .
T Consensus 1 M~~k~viFD~DGTL~dt-------~~~~~~~~~~~~~~~g~~------~~~~~~~~~~~~~--~~--------------~ 51 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDN-------YETSTAAFVETLALYGIT------QDHDSVYQALKVS--TP--------------F 51 (187)
T ss_dssp CCCSEEEECTBTTTBCH-------HHHHHHHHHHHHHHTTCC------CCHHHHHHHHHHC--HH--------------H
T ss_pred CCCCEEEEECCCCCCCC-------HHHHHHHHHHHHHHCCCC------CCHHHHHHHHHCC--CH--------------H
T ss_conf 99879999688975569-------999999999999985999------6378887643101--11--------------2
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHC---CCCC-----EEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCE
Q ss_conf 278606888801899999999998405---9972-----58413432897410479761134499999999998618990
Q 003682 610 DWETCVSVPDFSWKQIAEPVMKLYTET---TDGS-----TIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPV 681 (803)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~il~~~~~~---~~gs-----~ie~k~~~~~~~~~~~d~~~~~~~a~~l~~~l~~~l~~~~~ 681 (803)
.++..... ...+.+...+........ .||. .+..+...+..-. +. +. ...+.++.+. +.+.+.
T Consensus 52 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gv~~~l~~l~~~g~~~~i~S-n~-~~----~~~~~l~~~~--l~~~fd 122 (187)
T d2fi1a1 52 AIETFAPN-LENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVS-HR-ND----QVLEILEKTS--IAAYFT 122 (187)
T ss_dssp HHHHHCTT-CTTHHHHHHHHHHHHTTSCCBCTTHHHHHHHHHHTTCEEEEEC-SS-CT----HHHHHHHHTT--CGGGEE
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC-CC-CC----CHHHHHHHHC--CCCCCC
T ss_conf 10024678-9999999999999876247024426888887776421223345-57-62----1013455420--221222
Q ss_pred EEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCH
Q ss_conf 998879099999399999999999999754479994629999099003999998024
Q 003682 682 SVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 682 ~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~ 738 (803)
.++.+.....-+| +....+.+++++ +. +.+++|||+.+|+.+.+.+|.
T Consensus 123 ~i~~~~~~~~~KP----~p~~~~~~~~~~---~~--~~~l~vgDs~~Di~aA~~aG~ 170 (187)
T d2fi1a1 123 EVVTSSSGFKRKP----NPESMLYLREKY---QI--SSGLVIGDRPIDIEAGQAAGL 170 (187)
T ss_dssp EEECGGGCCCCTT----SCHHHHHHHHHT---TC--SSEEEEESSHHHHHHHHHTTC
T ss_pred CCCCCCCCCCCCC----CHHHHHHHHHHC---CC--CCEEEEECCHHHHHHHHHCCC
T ss_conf 2122222345688----899999999984---99--976999079999999998599
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.55 E-value=0.00043 Score=40.73 Aligned_cols=159 Identities=15% Similarity=0.212 Sum_probs=95.0
Q ss_pred EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEECCCEEEEECCCEEEE
Q ss_conf 59999438867899999999998999999997318998399995899654999862278971781185899938942278
Q 003682 533 RAILLDYDGTIMVPGSISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWE 612 (803)
Q Consensus 533 klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~~l~liaenG~~i~~~~~~~~~ 612 (803)
.++.+|-+|||.-. .-..+.+.+.++++.| ++.|+.++++||-.......+... +++...+- ..+
T Consensus 3 ~~~~~d~~~~~~~~--~~Dp~R~~~~~~I~~l-~~~GI~v~miTGD~~~tA~~ia~~---~Gi~~~~~--------~v~- 67 (168)
T d1wpga2 3 SVICSDKTGTLTTN--QLDPPRKEVMGSIQLC-RDAGIRVIMITGDNKGTAIAICRR---IGIFGENE--------EVA- 67 (168)
T ss_dssp CEEEECCTTTTBCC--CECCBCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHH---TTSSCTTC--------CCT-
T ss_pred EEEEECCCCEEEEE--ECCCCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHH---CCCCCCCC--------CCC-
T ss_conf 89997885178887--3488965399999999-988498999899997999999998---49988764--------111-
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCEEEEE
Q ss_conf 60688880189999999999840599725841343289741047976113449999999999861899099887909999
Q 003682 613 TCVSVPDFSWKQIAEPVMKLYTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEV 692 (803)
Q Consensus 613 ~~~~~~~~~~~~~~~~il~~~~~~~~gs~ie~k~~~~~~~~~~~d~~~~~~~a~~l~~~l~~~l~~~~~~v~~g~~~iev 692 (803)
. ....+.+. . .. ...+..+.+ ... .-+-++
T Consensus 68 ---~-~~~~~~~~-~---------------------------~~-------~~~~~~~~~----~~~-------~v~ar~ 97 (168)
T d1wpga2 68 ---D-RAYTGREF-D---------------------------DL-------PLAEQREAC----RRA-------CCFARV 97 (168)
T ss_dssp ---T-TEEEHHHH-H---------------------------HS-------CHHHHHHHH----HHC-------CEEESC
T ss_pred ---C-CCCCCCCC-C---------------------------HH-------HHHHHHHHH----HHH-------HHHHCC
T ss_conf ---0-00346300-0---------------------------01-------278876655----322-------300000
Q ss_pred EECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCC----CCCCEEEEC
Q ss_conf 9399999999999999754479994629999099003999998024028999999850589992798----862406809
Q 003682 693 KPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQK----PSKAKYYLD 768 (803)
Q Consensus 693 ~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~----~s~A~~~i~ 768 (803)
.|. +|...++.+.+. | ..+.++||+.||.++++.++ +++++|.. +..|+.++-
T Consensus 98 ~p~--~K~~lv~~l~~~----g---~~Va~vGDG~nD~~AL~~Ad--------------vGIa~~~gt~~a~~aAdivl~ 154 (168)
T d1wpga2 98 EPS--HKSKIVEYLQSY----D---EITAMTGDGVNDAPALKKAE--------------IGIAMGSGTAVAKTASEMVLA 154 (168)
T ss_dssp CHH--HHHHHHHHHHHT----T---CCEEEEECSGGGHHHHHHSS--------------EEEEETTSCHHHHHTCSEEET
T ss_pred CHH--HHHHHHHHHHHC----C---CCEEEEECCCCCHHHHHHCC--------------EEEEECCCCHHHHHHCCEEEC
T ss_conf 114--788899998740----4---54047706778889998598--------------888865511999984899991
Q ss_pred --CHHHHHHHHHH
Q ss_conf --97599999999
Q 003682 769 --DTAEILRMLLG 779 (803)
Q Consensus 769 --~~~ev~~~L~~ 779 (803)
+...+...+++
T Consensus 155 ~~~l~~v~~~I~~ 167 (168)
T d1wpga2 155 DDNFSTIVAAVEE 167 (168)
T ss_dssp TCCTHHHHHHHHH
T ss_pred CCCHHHHHHHHHC
T ss_conf 5998999999974
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.25 E-value=0.0002 Score=42.78 Aligned_cols=55 Identities=27% Similarity=0.357 Sum_probs=42.6
Q ss_pred EEEEECCCCCCCCC-CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHH---HHHHHHC
Q ss_conf 99994388678999-99999998999999997318998399995899654---9998622
Q 003682 534 AILLDYDGTIMVPG-SISTSPNAEAVAILDNLCRDPKNVVFLVSGKDRDT---LAEWFSS 589 (803)
Q Consensus 534 lii~DlDGTL~~~~-~~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~---l~~~~~~ 589 (803)
-|++|+||||+... +....|-+.+++.|++| .+.|..+++.|+|+... ...|+..
T Consensus 2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L-~~~G~~IIi~TaR~~~~~~~t~~wL~~ 60 (122)
T d2obba1 2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLL-QQEKHRLILWSVREGELLDEAIEWCRA 60 (122)
T ss_dssp EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHH-HHTTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH-HHCCCEEEEEECCCCCCHHHHHHHHHH
T ss_conf 89997579708899976366459999999999-987996999935888653889999998
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=97.24 E-value=6.8e-05 Score=45.77 Aligned_cols=154 Identities=16% Similarity=0.127 Sum_probs=89.7
Q ss_pred CCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEECCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 99899999999731899839999589965499986227897178118589993894227860688880189999999999
Q 003682 553 PNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSCEGLGIAAEHGYFVRPNYGVDWETCVSVPDFSWKQIAEPVMKL 632 (803)
Q Consensus 553 i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~~~l~liaenG~~i~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 632 (803)
|.+.+.++|+.| ++.|+.++++||++...+...+..+ ++.... . ... .. . .+.+......
T Consensus 216 p~~~v~~~l~~l-k~aGi~v~i~Tg~~~~~a~~il~~l---gl~~~F------~-~~~---i~-----~-~~d~~~~~~~ 275 (380)
T d1qyia_ 216 PVDEVKVLLNDL-KGAGFELGIATGRPYTETVVPFENL---GLLPYF------E-ADF---IA-----T-ASDVLEAENM 275 (380)
T ss_dssp CHHHHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHHH---TCGGGS------C-GGG---EE-----C-HHHHHHHHHH
T ss_pred CHHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHC---CCCCCC------C-CCE---EE-----E-CCHHHHHHHH
T ss_conf 436399999999-9879959998899799999999981---995347------8-505---87-----4-4133311220
Q ss_pred HHHCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 84059972584134328974104797611344999999999986189909988790999993999999999999997544
Q 003682 633 YTETTDGSTIETKESALVWNFQYADPDFGSCQAKELLDHLESVLANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQ 712 (803)
Q Consensus 633 ~~~~~~gs~ie~k~~~~~~~~~~~d~~~~~~~a~~l~~~l~~~l~~~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~ 712 (803)
. +.... ....+|+ ..... ..... . +...-..+.+.+
T Consensus 276 ~----~~~~~----------~~KP~p~--------~~~~~---~~~~~-------------~----~~~~k~~iv~~~-- 311 (380)
T d1qyia_ 276 Y----PQARP----------LGKPNPF--------SYIAA---LYGNN-------------R----DKYESYINKQDN-- 311 (380)
T ss_dssp S----TTSCC----------CCTTSTH--------HHHHH---HHCCC-------------G----GGHHHHHHCCTT--
T ss_pred C----CCCCC----------CCCCCHH--------HHHHH---HHHCC-------------C----CHHHHHHHHHHH--
T ss_conf 3----31102----------3699869--------99999---99808-------------8----778899999973--
Q ss_pred CCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEECCCC---------CCCEEEECCHHHHHHHHHHHHH
Q ss_conf 799946299990990039999980240289999998505899927988---------6240680997599999999897
Q 003682 713 KGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTVGQKP---------SKAKYYLDDTAEILRMLLGLAE 782 (803)
Q Consensus 713 ~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~vG~~~---------s~A~~~i~~~~ev~~~L~~l~~ 782 (803)
+..++.++++||+.||++|.+.++. .+++|++|... ..|++++++..++.++|..+..
T Consensus 312 -~~~~~~~~~vGD~~~D~~aak~Ag~-----------~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il~~l~~ 378 (380)
T d1qyia_ 312 -IVNKDDVFIVGDSLADLLSAQKIGA-----------TFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLE 378 (380)
T ss_dssp -CSCTTTEEEEESSHHHHHHHHHHTC-----------EEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHHSCTTT
T ss_pred -CCCCCEEEEECCCHHHHHHHHHCCC-----------CEEEEECCCCCCCCHHHHHHCCCCEEECCHHHHHHHHHHHHH
T ss_conf -8998869998899899999998799-----------889994588886437789767999998899999999999985
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.21 E-value=0.0004 Score=40.93 Aligned_cols=47 Identities=13% Similarity=0.328 Sum_probs=38.7
Q ss_pred EEEEEECCCCCCCCCC---CCCCCCHHHHHHHHHHHCCCCCEEEEECCCCH
Q ss_conf 5999943886789999---99999989999999973189983999958996
Q 003682 533 RAILLDYDGTIMVPGS---ISTSPNAEAVAILDNLCRDPKNVVFLVSGKDR 580 (803)
Q Consensus 533 klii~DlDGTL~~~~~---~~~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~ 580 (803)
+-|++|+||||+.... ....|.+.+++.|+.| .+.|..+++.|+|..
T Consensus 2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l-~~~G~~Iii~TaR~~ 51 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREY-HQLGFEIVISTARNM 51 (124)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHH-HHTTCEEEEEECTTT
T ss_pred CEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHH-HHCCCEEEEEECCCC
T ss_conf 99999378872889999827368489999999999-987998999956875
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=95.29 E-value=0.0038 Score=34.86 Aligned_cols=40 Identities=15% Similarity=0.164 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 89889999998159959999438867899999999998999999997
Q 003682 518 LSIDHIVSAYKRTKNRAILLDYDGTIMVPGSISTSPNAEAVAILDNL 564 (803)
Q Consensus 518 l~~~~~~~~y~~~~~klii~DlDGTL~~~~~~~~~i~~~~~~~L~~L 564 (803)
..+.++.+.+...+...|+||+|.|+++. ++......+.+
T Consensus 21 ~~~~~i~~~~~g~~P~AIifDIDETvLdn-------spy~~~~~~~~ 60 (209)
T d2b82a1 21 VSVAQIENSLAGRPPMAVGFDIDDTVLFS-------SPGFWRGKKTF 60 (209)
T ss_dssp ECHHHHHHHTTTCCCCEEEECCBTTTEEC-------HHHHHHHHHHH
T ss_pred EEHHHHHHHCCCCCCCEEEECCHHHHHCC-------CHHHHHHHHHC
T ss_conf 77888887557999846897031443238-------38887665403
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.12 E-value=0.023 Score=29.93 Aligned_cols=83 Identities=16% Similarity=0.099 Sum_probs=57.6
Q ss_pred HCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEE
Q ss_conf 61899099887909999939999999999999975447999462999909900399999802402899999985058999
Q 003682 676 LANEPVSVKSGPNIVEVKPQGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACT 755 (803)
Q Consensus 676 l~~~~~~v~~g~~~iev~p~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~ 755 (803)
+..+...++.+...-.-+| +....+.+++.+ |++++++++|||+..|+.+.+.+|. -++.
T Consensus 142 ~~~~fd~i~~s~~~~~~KP----~~~~~~~~~~~~---~~~p~e~l~VgD~~~Di~~A~~~G~-------------~ti~ 201 (225)
T d1zd3a1 142 LKMHFDFLIESCQVGMVKP----EPQIYKFLLDTL---KASPSEVVFLDDIGANLKPARDLGM-------------VTIL 201 (225)
T ss_dssp HHTTSSEEEEHHHHTCCTT----CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHHTTC-------------EEEE
T ss_pred HHHHCCEEEECCCCCCCHH----HHHHHHHHHHHC---CCCCCCEEEEECCHHHHHHHHHCCC-------------EEEE
T ss_conf 3866638995122334304----778888776301---5686510588168887999998699-------------8999
Q ss_pred ECCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 2798862406809975999999998973024423
Q 003682 756 VGQKPSKAKYYLDDTAEILRMLLGLAEASAQDAC 789 (803)
Q Consensus 756 vG~~~s~A~~~i~~~~ev~~~L~~l~~~~~~~~~ 789 (803)
+.+.....+-|+++......+++
T Consensus 202 -----------v~~~~~~~~~l~~~~~~~l~~~~ 224 (225)
T d1zd3a1 202 -----------VQDTDTALKELEKVTGIQLLNTP 224 (225)
T ss_dssp -----------CSSHHHHHHHHHHHHTSCCSSCC
T ss_pred -----------ECCCCHHHHHHHHCCCCCCCCCC
T ss_conf -----------89863459999875396406889
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.06 E-value=0.022 Score=30.14 Aligned_cols=38 Identities=11% Similarity=0.107 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCH
Q ss_conf 99999999999754479994629999099003999998024
Q 003682 698 NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 698 ~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~ 738 (803)
-+..+....++++ +++++++++|||+.+|+...+.+|.
T Consensus 185 P~p~~~~~~~~~~---~~~p~~~l~vgD~~~dv~aA~~aG~ 222 (253)
T d1zs9a1 185 VESESYRKIADSI---GCSTNNILFLTDVTREASAAEEADV 222 (253)
T ss_dssp TCHHHHHHHHHHH---TSCGGGEEEEESCHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHH---CCCCCCEEEEECCHHHHHHHHHCCC
T ss_conf 7808889999994---8996748999479999999998599
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=94.45 E-value=0.03 Score=29.24 Aligned_cols=39 Identities=15% Similarity=0.187 Sum_probs=26.8
Q ss_pred CCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCC
Q ss_conf 9999899999999731899839999589965499986227
Q 003682 551 TSPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFSSC 590 (803)
Q Consensus 551 ~~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~~~ 590 (803)
..+-|.+.+.|++| ++.|+.++|+|+.+.......+...
T Consensus 126 ~~~~pg~~e~l~~L-~~~g~~l~i~Tn~~~~~~~~~~~~~ 164 (253)
T d1zs9a1 126 AEFFADVVPAVRKW-REAGMKVYIYSSGSVEAQKLLFGHS 164 (253)
T ss_dssp BCCCTTHHHHHHHH-HHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred CCCCCCHHHHHHHH-HHCCCCEEECCCCCHHHHHHHHHHC
T ss_conf 66688789999998-6424754445898488999999972
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.26 E-value=0.015 Score=31.20 Aligned_cols=50 Identities=16% Similarity=0.224 Sum_probs=35.8
Q ss_pred HCCCEEEEEECCCCCCCCCC-----C---CCC-CCHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf 15995999943886789999-----9---999-998999999997318998399995899
Q 003682 529 RTKNRAILLDYDGTIMVPGS-----I---STS-PNAEAVAILDNLCRDPKNVVFLVSGKD 579 (803)
Q Consensus 529 ~~~~klii~DlDGTL~~~~~-----~---~~~-i~~~~~~~L~~L~~~~g~~v~i~TGR~ 579 (803)
+...|.++||.||||+...+ . +-. +.+.+.++|+.| .+.|..++|+|..+
T Consensus 18 ~~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L-~~~gy~iiIvTNQ~ 76 (195)
T d1yj5a1 18 KPQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQEL-AAEGYKLVIFTNQM 76 (195)
T ss_dssp CCCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHH-HHHTCEEEEEEECH
T ss_pred CCCCCEEEEECCCCEEEECCCCCCCCCHHHCEECCCCHHHHHHHH-HHCCCEEEEECCCC
T ss_conf 876808999789951754899867898466345167799999999-86784799952763
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=92.95 E-value=0.053 Score=27.69 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCH
Q ss_conf 9999999999754479994629999099003999998024
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~ 738 (803)
+....+.+++.+ |++++++++|||+.+|+...+.+|.
T Consensus 143 ~~~~~~~~~~~~---~~~~~~~l~vgDs~~di~~A~~aG~ 179 (197)
T d2b0ca1 143 EARIYQHVLQAE---GFSPSDTVFFDDNADNIEGANQLGI 179 (197)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHC---CCCCCEEEEEECCHHHHHHHHHCCC
T ss_conf 648999999851---9998818999679899999998699
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=92.58 E-value=0.23 Score=23.75 Aligned_cols=97 Identities=12% Similarity=0.086 Sum_probs=58.8
Q ss_pred EEECCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCC--------
Q ss_conf 996189999899999985432300355667888831134521388532222489999999860896244243--------
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGC-------- 425 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~adv~v~tS~~Eg~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~-------- 425 (803)
+.+.+.+++.+ ++..+|+|+..+ |.| +..|+++| |.|+|+.-+.+-
T Consensus 272 v~i~~~~p~~~---ll~~a~~~v~hg---G~~-t~~Eal~~-------------------G~P~v~~P~~~d~~~eQ~~n 325 (391)
T d1pn3a_ 272 CFVVGEVNLQE---LFGRVAAAIHHD---SAG-TTLLAMRA-------------------GIPQIVVRRVVDNVVEQAYH 325 (391)
T ss_dssp CCEESSCCHHH---HHTTSSCEEEES---CHH-HHHHHHHH-------------------TCCEEEECSSCCBTTBCCHH
T ss_pred EEEECCCCHHH---HHHHCCEEEECC---CHH-HHHHHHHH-------------------CCCEEEECCCCCCCCHHHHH
T ss_conf 89954468799---984254898527---437-99999982-------------------88689933556774529999
Q ss_pred CCCC---CCCCEECCC--CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHH
Q ss_conf 1238---898052899--98999999999937999999999998602002279779999
Q 003682 426 SPSL---SGAIRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWAR 479 (803)
Q Consensus 426 ~~~l---~~~~lvnP~--d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 479 (803)
++.+ +.|+.+++. +.++++++|.++|+..-. .+.+++.+.+.......=++
T Consensus 326 A~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~r---~~a~~~a~~~~~~g~~~aa~ 381 (391)
T d1pn3a_ 326 ADRVAELGVGVAVDGPVPTIDSLSAALDTALAPEIR---ARATTVADTIRADGTTVAAQ 381 (391)
T ss_dssp HHHHHHHTSEEEECCSSCCHHHHHHHHHHHTSTTHH---HHHHHHGGGSCSCHHHHHHH
T ss_pred HHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCHHHH---HHHHHHHHHHHHCCHHHHHH
T ss_conf 999998798897685789999999999998399999---99999999988527999999
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=92.47 E-value=0.23 Score=23.67 Aligned_cols=253 Identities=17% Similarity=0.114 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHCCCCCHHHHHHHH--CCC
Q ss_conf 999999999999986519999968983864331589998507997299897067999365402988089999976--099
Q 003682 120 AYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPIRDELLRALL--NAD 197 (803)
Q Consensus 120 ~Y~~vN~~fa~~i~~~~~~~~d~vwihDyhl~llp~~lr~~~~~~~i~~f~H~pfP~~~~~~~lp~~~~ll~~ll--~~d 197 (803)
..-.+-..+++.+ ...+| |+|.|++=-.-.++.-+.....++||+..--= ..+.++. -+..++..|-+. .+|
T Consensus 72 ~~~~~~~~~~~~l-~~~kP--D~vlv~GDr~e~la~a~aa~~~~ipi~HiegG-~rsg~~~--~~~~de~~R~~iskls~ 145 (373)
T d1v4va_ 72 LAARILPQAARAL-KEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAG-LRSGNLK--EPFPEEANRRLTDVLTD 145 (373)
T ss_dssp HHHHHHHHHHHHH-HHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEEEETCC-CCCSCTT--SSTTHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHH-HHCCC--CCCCCCCCCCCCHHHHHHHHHHHHHHEEECCC-CCCCCCC--CCCCHHHHHHHHCCCCC
T ss_conf 9999999876666-40376--40011136753103778898762122241343-4554335--67616666655223443
Q ss_pred EEECCCHHHHHHHHHHHHHHHCCEECCCCCEEEEEECCEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHH----HHC
Q ss_conf 8801597669989999998719602256760149986939999682255791689977099438999999999----818
Q 003682 198 LIGFHTFDYARHFLSCCSRMLGVSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQSVLNLPETEAKVAELQD----QFK 273 (803)
Q Consensus 198 ligf~~~~~~~~Fl~~~~~~lg~~~~~~~~~~~~~~~g~~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~----~~~ 273 (803)
+-.-.+..+.++.+. .|.. ..+ +.. +..+++|. +... ..+.. ...
T Consensus 146 ~hf~~t~~~~~~L~~-----~Ge~--~~~----I~~--------vG~p~~D~--i~~~----------~~~~~~~~~~~~ 194 (373)
T d1v4va_ 146 LDFAPTPLAKANLLK-----EGKR--EEG----ILV--------TGQTGVDA--VLLA----------AKLGRLPEGLPE 194 (373)
T ss_dssp EEEESSHHHHHHHHT-----TTCC--GGG----EEE--------CCCHHHHH--HHHH----------HHHCCCCTTCCS
T ss_pred EEEECCHHHHHHHHH-----HCCC--CCC----EEE--------CCCCHHHH--HHHH----------HHHCCCCCCCCC
T ss_conf 255122156666666-----3045--421----344--------26621557--7765----------431100022344
Q ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
Q ss_conf 97799941474323488899999999998199998957899993289999146999999999999998602199995108
Q 003682 274 GQIVMLGVDDMDIFKGISLKLLAMEQLLSQNPSKRGKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRPGYQPV 353 (803)
Q Consensus 274 ~~~iil~v~Rl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~li~i~~~~~~~~~~~~~l~~~i~~lv~~in~~~~~~~~~~v 353 (803)
++.+++..-|....+.....+.++..+.+..++.. ++... +. . +.. .....+ .... ...+
T Consensus 195 ~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~----~i~p~-~~--~-~~~---~~~~~~----~~~~-----~~n~ 254 (373)
T d1v4va_ 195 GPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLT----FVYPV-HL--N-PVV---REAVFP----VLKG-----VRNF 254 (373)
T ss_dssp SCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSE----EEEEC-CS--C-HHH---HHHHHH----HHTT-----CTTE
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCE----EEEEE-CC--C-CCC---HHHHHH----HHCC-----CCCC
T ss_conf 55316884265553127899999999865335650----35640-34--2-221---035555----4303-----3320
Q ss_pred EEECCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC-C-CC
Q ss_conf 996189999899999985432300355667888831134521388532222489999999860896244243123-8-89
Q 003682 354 VLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCSPS-L-SG 431 (803)
Q Consensus 354 ~~~~~~~~~~~l~aly~~adv~v~tS~~Eg~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~~~-l-~~ 431 (803)
.+ ...+++.+...+++.|++.+-.|- -...||.+. +.|+|.-...|-.+. + .|
T Consensus 255 ~~-~~~l~~~~~l~ll~~s~~vignSs-----sgi~Ea~~l-------------------g~P~Inir~~~eRqeg~~~g 309 (373)
T d1v4va_ 255 VL-LDPLEYGSMAALMRASLLLVTDSG-----GLQEEGAAL-------------------GVPVVVLRNVTERPEGLKAG 309 (373)
T ss_dssp EE-ECCCCHHHHHHHHHTEEEEEESCH-----HHHHHHHHT-------------------TCCEEECSSSCSCHHHHHHT
T ss_pred EE-ECCCHHHHHHHHHHHCEEEECCCC-----HHHHCCHHH-------------------CCCEEEECCCCCCHHHHHCC
T ss_conf 01-110007888887643016850641-----222200320-------------------58689848876698789629
Q ss_pred CCEECCCCHHHHHHHHHHHHCCC
Q ss_conf 80528999899999999993799
Q 003682 432 AIRVNPWNIDAVAEAMDSALGVS 454 (803)
Q Consensus 432 ~~lvnP~d~~~~a~ai~~aL~~~ 454 (803)
...+-+.|.+++..++.+++..+
T Consensus 310 ~nvlv~~d~~~I~~~i~~~l~~~ 332 (373)
T d1v4va_ 310 ILKLAGTDPEGVYRVVKGLLENP 332 (373)
T ss_dssp SEEECCSCHHHHHHHHHHHHTCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCH
T ss_conf 04975899999999999997198
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.69 E-value=0.2 Score=24.10 Aligned_cols=37 Identities=16% Similarity=0.130 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCH
Q ss_conf 9999999999754479994629999099003999998024
Q 003682 699 KGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 699 Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~ 738 (803)
...+...+++++ |+.|+++++|||+.+|+...+.+|.
T Consensus 161 ~p~~f~~~~~~l---g~~p~e~l~VgD~~~Dv~~A~~aG~ 197 (225)
T d2g80a1 161 ETQSYANILRDI---GAKASEVLFLSDNPLELDAAAGVGI 197 (225)
T ss_dssp CHHHHHHHHHHH---TCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHC---CCCCHHCEEECCCHHHHHHHHHCCC
T ss_conf 816767788743---6681243464477888999998599
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.89 E-value=0.042 Score=28.35 Aligned_cols=27 Identities=15% Similarity=0.020 Sum_probs=16.2
Q ss_pred CHHHHHHHHHHHCCCCCEEEEECCCCHH
Q ss_conf 9899999999731899839999589965
Q 003682 554 NAEAVAILDNLCRDPKNVVFLVSGKDRD 581 (803)
Q Consensus 554 ~~~~~~~L~~L~~~~g~~v~i~TGR~~~ 581 (803)
.+.+.+.|..| ++.+..++++|+....
T Consensus 101 ~~~~~~~l~~L-~~~~~~~~i~Tn~~~~ 127 (225)
T d1zd3a1 101 NRPMLQAALML-RKKGFTTAILTNTWLD 127 (225)
T ss_dssp CHHHHHHHHHH-HHTTCEEEEEECCCCC
T ss_pred CCCHHHHHHHH-HHCCCCCCCCCCCCHH
T ss_conf 80199999999-8634863345434124
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=88.96 E-value=0.49 Score=21.64 Aligned_cols=150 Identities=13% Similarity=0.092 Sum_probs=94.6
Q ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHH---HHHHCCCCC-CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 897799941474323488899999999---998199998-9578999932899991469999999999999986021999
Q 003682 273 KGQIVMLGVDDMDIFKGISLKLLAMEQ---LLSQNPSKR-GKIVLVQIANPARGRGRDVQEVQSETHATVRRINKIFGRP 348 (803)
Q Consensus 273 ~~~~iil~v~Rl~~~Kgi~~~l~A~~~---ll~~~p~~~-~~v~li~i~~~~~~~~~~~~~l~~~i~~lv~~in~~~~~~ 348 (803)
++...+.++-|+..-|-..+.+.-..+ .++..|... ..+++|..|-..-++ ....++.+.+.+++..||..-...
T Consensus 524 p~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d-~~gK~iIk~I~~va~~in~dp~~~ 602 (796)
T d1l5wa_ 524 PQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINNDPLVG 602 (796)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTG
T ss_pred HHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCH-HHHHHHHHHHHHHHHHHCCCHHHC
T ss_conf 5651403434544431453035359999999850864577865999748889831-789999999999999861785543
Q ss_pred CCCCEEEECCCCCHHHHHHHHHHCCCCEECCCC--CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
Q ss_conf 951089961899998999999854323003556--678888311345213885322224899999998608962442431
Q 003682 349 GYQPVVLIDTPLQFYERIAYYVIAECCLVTAVR--DGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVGCS 426 (803)
Q Consensus 349 ~~~~v~~~~~~~~~~~l~aly~~adv~v~tS~~--Eg~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G~~ 426 (803)
+...|+|+. ..+-.--..+...+||-+.+|.+ |.-|..-+-|+. .|++.+|..-|.-
T Consensus 603 ~~~kVVFle-nYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaal--------------------NG~lnlstlDGw~ 661 (796)
T d1l5wa_ 603 DKLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLAL--------------------NGALTVGTLDGAN 661 (796)
T ss_dssp GGEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHH--------------------TTCEEEECSCTTH
T ss_pred CCEEEEEEC-CCCHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHH--------------------CCCEEEECCCCHH
T ss_conf 633389807-8756899987440126540999873457826779998--------------------5971660466447
Q ss_pred CCC------CCCCEECCCCHHHHHH
Q ss_conf 238------8980528999899999
Q 003682 427 PSL------SGAIRVNPWNIDAVAE 445 (803)
Q Consensus 427 ~~l------~~~~lvnP~d~~~~a~ 445 (803)
-++ ++++.+- .+.+++.+
T Consensus 662 vE~~~~vg~eN~f~fG-~~~~ev~~ 685 (796)
T d1l5wa_ 662 VEIAEKVGEENIFIFG-HTVEQVKA 685 (796)
T ss_dssp HHHHHHHCGGGSEECS-CCHHHHHH
T ss_pred HHHHHHCCCCCEEEEC-CCHHHHHH
T ss_conf 9888863745368806-86677788
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.88 E-value=0.21 Score=23.90 Aligned_cols=11 Identities=36% Similarity=0.724 Sum_probs=7.5
Q ss_pred EEEECCCCCCC
Q ss_conf 99943886789
Q 003682 535 ILLDYDGTIMV 545 (803)
Q Consensus 535 ii~DlDGTL~~ 545 (803)
|++|+||||++
T Consensus 6 I~iDmDGVL~D 16 (195)
T d1q92a_ 6 VLVDMDGVLAD 16 (195)
T ss_dssp EEECSBTTTBC
T ss_pred EEEECCCCCCC
T ss_conf 99979986506
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=87.96 E-value=0.57 Score=21.23 Aligned_cols=97 Identities=11% Similarity=0.009 Sum_probs=59.7
Q ss_pred EEEECCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCC----CCCC
Q ss_conf 899618999989999998543230035566788883113452138853222248999999986089624424----3123
Q 003682 353 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG----CSPS 428 (803)
Q Consensus 353 v~~~~~~~~~~~l~aly~~adv~v~tS~~Eg~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G----~~~~ 428 (803)
.+.+.+.+++.++ +..+|+|+. .|-.-+..|++++ |.|+|+.-+.+ .++.
T Consensus 287 ~v~~~~~~p~~~l---l~~~~~~I~----hgG~~t~~Eal~~-------------------GvP~l~~P~~~DQ~~na~~ 340 (401)
T d1rrva_ 287 DCFAIDEVNFQAL---FRRVAAVIH----HGSAGTEHVATRA-------------------GVPQLVIPRNTDQPYFAGR 340 (401)
T ss_dssp TEEEESSCCHHHH---GGGSSEEEE----CCCHHHHHHHHHH-------------------TCCEEECCCSBTHHHHHHH
T ss_pred CEEEEECCCCHHH---HHHCCEEEE----CCCCHHHHHHHHH-------------------CCCEEEECCCCCHHHHHHH
T ss_conf 8899731481777---621248886----1772489999983-------------------9998980661208999999
Q ss_pred C---CCCCEECCC--CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 8---898052899--9899999999993799999999999860200227977999
Q 003682 429 L---SGAIRVNPW--NIDAVAEAMDSALGVSDAEKQMRHEKHYRYVSTHDVAYWA 478 (803)
Q Consensus 429 l---~~~~lvnP~--d~~~~a~ai~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~ 478 (803)
+ +-|+.+++. +.+.++++|.++|+ ++. +.+.++..+.+.......-+
T Consensus 341 v~~~G~g~~l~~~~~~~~~L~~ai~~vl~--~~~-r~~a~~~~~~~~~~g~~~aa 392 (401)
T d1rrva_ 341 VAALGIGVAHDGPTPTFESLSAALTTVLA--PET-RARAEAVAGMVLTDGAAAAA 392 (401)
T ss_dssp HHHHTSEEECSSSCCCHHHHHHHHHHHTS--HHH-HHHHHHHTTTCCCCHHHHHH
T ss_pred HHHCCCEEECCCCCCCHHHHHHHHHHHHC--HHH-HHHHHHHHHHHHHCCHHHHH
T ss_conf 99879889757478999999999999849--799-99999999987551799999
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.68 E-value=0.26 Score=23.43 Aligned_cols=60 Identities=8% Similarity=0.026 Sum_probs=34.8
Q ss_pred HCCCEEEEEECCCCCCCCCCCCC--------------------CCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 15995999943886789999999--------------------9998999999997318998399995899654999862
Q 003682 529 RTKNRAILLDYDGTIMVPGSIST--------------------SPNAEAVAILDNLCRDPKNVVFLVSGKDRDTLAEWFS 588 (803)
Q Consensus 529 ~~~~klii~DlDGTL~~~~~~~~--------------------~i~~~~~~~L~~L~~~~g~~v~i~TGR~~~~l~~~~~ 588 (803)
..++..+++|+|+||+....... ..-|.+.+.|+.+++ ...++|-|.-+..-+...+.
T Consensus 12 ~~~k~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~--~yei~I~Ta~~~~YA~~il~ 89 (181)
T d1ta0a_ 12 DSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGE--LFECVLFTASLAKYADPVAD 89 (181)
T ss_dssp GTTSCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHH--HSEEEEECSSCHHHHHHHHH
T ss_pred CCCCEEEEEECCCCEECCCCCCCCCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHH--CEEEEEECCCCHHHHHHHHH
T ss_conf 6898189996899778542678877664100001210133478639889999999986--00899983871778999999
Q ss_pred CC
Q ss_conf 27
Q 003682 589 SC 590 (803)
Q Consensus 589 ~~ 590 (803)
.+
T Consensus 90 ~l 91 (181)
T d1ta0a_ 90 LL 91 (181)
T ss_dssp HH
T ss_pred HH
T ss_conf 86
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=87.32 E-value=0.47 Score=21.78 Aligned_cols=74 Identities=7% Similarity=-0.010 Sum_probs=49.7
Q ss_pred EEEECCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCC----CCCC
Q ss_conf 899618999989999998543230035566788883113452138853222248999999986089624424----3123
Q 003682 353 VVLIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDMTLGLDPSTAKSSMLVVSEFVG----CSPS 428 (803)
Q Consensus 353 v~~~~~~~~~~~l~aly~~adv~v~tS~~Eg~~Lv~~Ea~a~~~~~~~~~~~~~~~~~~~~~g~vV~S~~~G----~~~~ 428 (803)
.+.+.+.+++.+ +|..+|+||. .|-.-+..|++++ |.|+|+.-+.+ .+..
T Consensus 286 nv~~~~~~p~~~---~l~~~~~~V~----hgG~~t~~Eal~~-------------------GvP~v~~P~~~DQ~~na~~ 339 (401)
T d1iira_ 286 DCFAIGEVNHQV---LFGRVAAVIH----HGGAGTTHVAARA-------------------GAPQILLPQMADQPYYAGR 339 (401)
T ss_dssp GEEECSSCCHHH---HGGGSSEEEE----CCCHHHHHHHHHH-------------------TCCEEECCCSTTHHHHHHH
T ss_pred CEEEEECCCHHH---HHHHCCEEEE----CCCCHHHHHHHHH-------------------CCCEEECCCCCCHHHHHHH
T ss_conf 789970258799---9954589996----3771699999981-------------------9999980661417999999
Q ss_pred C---CCCCEECCC--CHHHHHHHHHHHHC
Q ss_conf 8---898052899--98999999999937
Q 003682 429 L---SGAIRVNPW--NIDAVAEAMDSALG 452 (803)
Q Consensus 429 l---~~~~lvnP~--d~~~~a~ai~~aL~ 452 (803)
+ +.|+.+++. +.++++++|.++|+
T Consensus 340 l~~~G~g~~l~~~~~~~~~l~~ai~~~l~ 368 (401)
T d1iira_ 340 VAELGVGVAHDGPIPTFDSLSAALATALT 368 (401)
T ss_dssp HHHHTSEEECSSSSCCHHHHHHHHHHHTS
T ss_pred HHHCCCEEECCCCCCCHHHHHHHHHHHHC
T ss_conf 99879888768478999999999999969
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=84.08 E-value=0.2 Score=24.12 Aligned_cols=25 Identities=16% Similarity=0.267 Sum_probs=15.2
Q ss_pred EEEEECCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 9999438867899999999998999999997
Q 003682 534 AILLDYDGTIMVPGSISTSPNAEAVAILDNL 564 (803)
Q Consensus 534 lii~DlDGTL~~~~~~~~~i~~~~~~~L~~L 564 (803)
|++||+||||++ .. .....+.+..+
T Consensus 2 l~iFDlDgtL~d---~~---~~~~~~~~~~~ 26 (197)
T d2b0ca1 2 LYIFDLGNVIVD---ID---FNRVLGAWSDL 26 (197)
T ss_dssp EEEECCBTTTEE---EE---THHHHHHHHHH
T ss_pred EEEEECCCCCCC---CH---HHHHHHHHHHH
T ss_conf 899969997372---87---99999999987
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=83.43 E-value=0.91 Score=19.99 Aligned_cols=74 Identities=23% Similarity=0.328 Sum_probs=42.1
Q ss_pred ECCC-CHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCHHCCCCCCCCCCCEEEEEE-CCC--CCCCEEEECC
Q ss_conf 3999-99999999999754479994629999099003999998024028999999850589992-798--8624068099
Q 003682 694 PQGV-NKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKSAAAGPSLSPVAEVFACTV-GQK--PSKAKYYLDD 769 (803)
Q Consensus 694 p~~~-~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~~~a~~~~~~~~~~~~V~v-G~~--~s~A~~~i~~ 769 (803)
+.|. .|..+++.+++.. ++ +..+|+|||.+|.+|++.+..-. .++|+- |+. -..|+-.+-+
T Consensus 180 ~VGgg~k~~i~~~~~~~~---~~--~~~~~VGDSITDve~Lr~~r~~g----------GlaIsFNGN~Yal~eA~VaiiS 244 (308)
T d1y8aa1 180 AVGAGEKAKIMRGYCESK---GI--DFPVVVGDSISDYKMFEAARGLG----------GVAIAFNGNEYALKHADVVIIS 244 (308)
T ss_dssp CCCHHHHHHHHHHHHHHH---TC--SSCEEEECSGGGHHHHHHHHHTT----------CEEEEESCCHHHHTTCSEEEEC
T ss_pred CCCCCHHHHHHHHHCCCC---CC--CCCEECCCCCCCHHHHHHHHCCC----------CEEEEECCCCCCCCCCCEEEEC
T ss_conf 147851678998633612---69--86412367533278999974479----------8368856862444534468966
Q ss_pred --HHHHHHHHHHHHH
Q ss_conf --7599999999897
Q 003682 770 --TAEILRMLLGLAE 782 (803)
Q Consensus 770 --~~ev~~~L~~l~~ 782 (803)
...++-++.-..+
T Consensus 245 ~~~~a~~~i~dlf~~ 259 (308)
T d1y8aa1 245 PTAMSEAKVIELFME 259 (308)
T ss_dssp SSTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHC
T ss_conf 633578899999850
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=82.57 E-value=0.15 Score=24.85 Aligned_cols=50 Identities=18% Similarity=0.109 Sum_probs=35.0
Q ss_pred EEEEEEE---CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCH
Q ss_conf 0999993---99999999999999754479994629999099003999998024
Q 003682 688 NIVEVKP---QGVNKGLVAQHQLETMHQKGMLPDFVLCIGDDRSDEDMFEVIKS 738 (803)
Q Consensus 688 ~~iev~p---~~~~Kg~ai~~ll~~l~~~g~~~d~vl~iGD~~nD~~Mf~~~~~ 738 (803)
....+.. ...+|+..+......... ..+.++++++|||.||+.|.+.+..
T Consensus 193 ~~~~~~~~~i~~~~K~~~~~~~~~~~~~-~~~~~~vI~iGDs~~Dl~Ma~g~~~ 245 (291)
T d2bdua1 193 VLKGFKGELIHVFNKHDGALKNTDYFSQ-LKDNSNIILLGDSQGDLRMADGVAN 245 (291)
T ss_dssp BEEEECSSCCCTTCHHHHHHTTHHHHHH-TTTCCEEEEEESSSGGGGTTTTCSC
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHC-CCCCCCEEEEECCHHHHHHHHCCCC
T ss_conf 6860347864345686315445998853-2786768999677768999838854
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=80.27 E-value=0.35 Score=22.60 Aligned_cols=15 Identities=33% Similarity=0.518 Sum_probs=13.0
Q ss_pred CCEEEEEECCCCCCC
Q ss_conf 995999943886789
Q 003682 531 KNRAILLDYDGTIMV 545 (803)
Q Consensus 531 ~~klii~DlDGTL~~ 545 (803)
+++.++||+||||++
T Consensus 2 ~~~~~lfD~dGTl~d 16 (225)
T d2g80a1 2 NYSTYLLDIEGTVCP 16 (225)
T ss_dssp CCSEEEECCBTTTBC
T ss_pred CCCEEEECCCCCCCC
T ss_conf 988999858788736
|