Citrus Sinensis ID: 003742

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------80
MADAKANGKNEAAKLAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK
ccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEHHcccccHHHHHHHHHccHHHHHHHHHHHHcccHHHHHHcccccccccccccccHHHHHHHHHccccccccccccccccccEEEEccccEEcccccccccccccEEEccccEEEEEEcEEEEEcccccEEEEccEEEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHcHHHHHHHccHHHHHHHHHHHccccccccccccEEEEccccccccHHHHHHHHHHHcccccHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEccccccccccccHHHHcccccHHHHHHHHHHHHHcHHccHHHHcccccccccccccHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccccccccccccccHHHHHccccccccccHHHHHHHcHHHHHccccHHHHHHHHHccccEEEccccccHHHHHHHHcccccccccHHHHHHHHHHHcccccccccHHHHHHHHcccccccccEEEEccccHHHHHHHHHHHHHHc
ccccccccccccccHcccccccccccccHHHHHHHHHHHcEEEEccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccEEEEEcccEEEEccHHHHHHHcccHHHHHHHHHHccccHHHHHHHcccEEEcccHHHHHHHHHHHHHHHccccEEEEEEcccEcccEEEEEccEEEEEccEcccccccccEEcHHHcEEEEEccEEEEccccEEEEEEEEEEEEEEEEEEEEcccccccEEEEEEEEEEccccccccccccccHHHHHHccccHHHcccEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHEEEEEEccccccHHHHHHHHHHHcccccHHHHHHHHHHHEEEEcccccHHHccEEEHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccEEcccccEEEEHHHHHHHccccEEEccHHHHHHHHHcccHHHHHHcHHHEEEccccEcHHHHcccccHHHHHHHHHHHccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEccccHHHcHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccHHHHHHHHHHccEEEEccccccccccHHHHHHHHHccEEEEccccHHHHHHHHHcHHHcEEccccHHHHHHHccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccEEEEccHHHHHHHHHHHHHHHc
madakangKNEAAKLAkipaaanplanepsaiasnisyhvqysphfsptkfepeqafFATAESVRDRLIQQWNETYhhfnkvdpkqtYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDaalgngglgrlascfldsmatlnlpawgyglryryglFKQKITKQGQEEVAEDWlekfspwevvrhdvvfpvrffgsvmvnpngtrkwvggEVVQAVaydipipgyktkntiSLRLWDakasaedfnlfqfndgqyeSAAQLHSRAQQICAvlypgdsteegKLLRLKQQFFLCSASLQDMILRFKErksgrqwsefpSKVAVQLndthptlaIPELMRLLMDeeglgwdeawdITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRsdleskipsmcildnnpkkpvvRMANLCVVSAHTVNGVAQLHSDILKADLFADYVslwpnklqnktngitprrwlrfcnpELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVtgvtidpnslfDIQVKRIHEYKRQLLNILGAIYRYKklkemspqerkkttprtimiggkafaTYTNAKRIVKLVNDvgevvntdpevnsYLKVVFVPNYNVSVAELLipgselsqhistagmeasgtsnmkfslngcliigtldganVEIRQEIGEENFFLFGAVAEQVPKLRKeredglfkpdprfEEAKQFIRsgafgsydynplldslegntgygrgdyflvgydfpsyleaQDRVDQAYK
MADAKANGKNEAAKLAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAydipipgykTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRsdleskipsmcildnnpkkPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNklqnktngitprrwlRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRykklkemspqerkkttprtimiggkafatytnAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEredglfkpdprfEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK
MADAKANGKNEaaklakipaaanplanEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDaalgngglgrlaSCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK
**********************************NISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKL**************TIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSEL***************NMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQV*********************KQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLE**********
******************************AIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK
*************KLAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLK**********TPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK
*********************ANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK
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MADAKANGKNEAAKLAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query799 2.2.26 [Sep-21-2011]
Q9SD76841 Alpha-glucan phosphorylas yes no 0.996 0.946 0.823 0.0
P32811838 Alpha-glucan phosphorylas N/A no 0.986 0.940 0.826 0.0
P53537842 Alpha-glucan phosphorylas N/A no 0.996 0.945 0.811 0.0
Q9LKJ3832 Alpha-glucan phosphorylas N/A no 0.979 0.941 0.810 0.0
Q9LIB2962 Alpha-glucan phosphorylas no no 0.976 0.810 0.600 0.0
Q00766853 Glycogen phosphorylase 1 yes no 0.957 0.896 0.512 0.0
P34114 993 Glycogen phosphorylase 2 no no 0.956 0.769 0.489 0.0
P06738902 Glycogen phosphorylase OS yes no 0.918 0.813 0.476 0.0
Q9XTL9844 Glycogen phosphorylase OS yes no 0.951 0.900 0.464 0.0
Q9WUB3842 Glycogen phosphorylase, m yes no 0.951 0.902 0.469 0.0
>sp|Q9SD76|PHS2_ARATH Alpha-glucan phosphorylase 2, cytosolic OS=Arabidopsis thaliana GN=PHS2 PE=2 SV=1 Back     alignment and function desciption
 Score = 1409 bits (3647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 658/799 (82%), Positives = 729/799 (91%), Gaps = 3/799 (0%)

Query: 4   AKANGKNEAAKLAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAES 63
           A ANGK   +   KI A ANP A++ + IA NI YH +YSPHFSP KF PEQA +ATAES
Sbjct: 2   ANANGKAATSLPEKISAKANPEADDATEIAGNIVYHAKYSPHFSPLKFGPEQALYATAES 61

Query: 64  VRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHV 123
           +RDRLIQ WNETY HFNKVDPKQTYYLSME+LQGR LTNAIG+L++Q  YADAL  LG+ 
Sbjct: 62  LRDRLIQLWNETYVHFNKVDPKQTYYLSMEYLQGRALTNAIGNLNLQGPYADALRTLGYE 121

Query: 124 LEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEV 183
           LEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYR+GLFKQ ITK+GQEE+
Sbjct: 122 LEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRHGLFKQIITKKGQEEI 181

Query: 184 AEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKN 243
            EDWLEKFSPWE+VRHDVVFPVRFFG V VNP+G+RKWV G+VVQA+AYD+PIPGY TKN
Sbjct: 182 PEDWLEKFSPWEIVRHDVVFPVRFFGKVQVNPDGSRKWVDGDVVQALAYDVPIPGYGTKN 241

Query: 244 TISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQ 303
           TISLRLW+AKA AED +LFQFN+G+YE AAQLHSRAQQIC VLYPGD+TE GKLLRLKQQ
Sbjct: 242 TISLRLWEAKARAEDLDLFQFNEGEYELAAQLHSRAQQICTVLYPGDATENGKLLRLKQQ 301

Query: 304 FFLCSASLQDMILRFKERKS---GRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGL 360
           FFLCSASLQD+I RF ER +    R+WSEFPSKVAVQ+NDTHPTLAIPELMRLLMD+ GL
Sbjct: 302 FFLCSASLQDIISRFHERSTTEGSRKWSEFPSKVAVQMNDTHPTLAIPELMRLLMDDNGL 361

Query: 361 GWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRS 420
           GWDEAWD+T++TVAYTNHTVLPEALEKWSQ++MWKLLPRHMEIIEEIDKRF+  +R TR 
Sbjct: 362 GWDEAWDVTSKTVAYTNHTVLPEALEKWSQSLMWKLLPRHMEIIEEIDKRFVQTIRDTRV 421

Query: 421 DLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNK 480
           DLE KI S+ ILDNNP+KPVVRMANLCVVS+HTVNGVAQLHSDILKA+LFADYVS+WPNK
Sbjct: 422 DLEDKISSLSILDNNPQKPVVRMANLCVVSSHTVNGVAQLHSDILKAELFADYVSIWPNK 481

Query: 481 LQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESA 540
            QNKTNGITPRRWLRFC+PELS IITKWLKTD+W+T+LDLL GLRQFADN ELQ+EW SA
Sbjct: 482 FQNKTNGITPRRWLRFCSPELSDIITKWLKTDKWITDLDLLTGLRQFADNEELQSEWASA 541

Query: 541 KMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQE 600
           K A+KK LA YI RVTGV+IDP SLFDIQVKRIHEYKRQL+NILG +YR+KKLKEM P+E
Sbjct: 542 KTANKKRLAQYIERVTGVSIDPTSLFDIQVKRIHEYKRQLMNILGVVYRFKKLKEMKPEE 601

Query: 601 RKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAE 660
           RKKT PRT+MIGGKAFATYTNAKRIVKLVNDVG+VVN+DPEVN YLKVVFVPNYNV+VAE
Sbjct: 602 RKKTVPRTVMIGGKAFATYTNAKRIVKLVNDVGDVVNSDPEVNEYLKVVFVPNYNVTVAE 661

Query: 661 LLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720
           +LIPGSELSQHISTAGMEASGTSNMKF+LNGCLIIGTLDGANVEIR+E+GEENFFLFGA 
Sbjct: 662 MLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEVGEENFFLFGAT 721

Query: 721 AEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLV 780
           A+QVP+LRKEREDGLFKPDPRFEEAKQF++SG FGSYDY PLLDSLEGNTG+GRGDYFLV
Sbjct: 722 ADQVPRLRKEREDGLFKPDPRFEEAKQFVKSGVFGSYDYGPLLDSLEGNTGFGRGDYFLV 781

Query: 781 GYDFPSYLEAQDRVDQAYK 799
           GYDFPSY++AQ +VD+AYK
Sbjct: 782 GYDFPSYMDAQAKVDEAYK 800
Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1
>sp|P32811|PHSH_SOLTU Alpha-glucan phosphorylase, H isozyme OS=Solanum tuberosum PE=1 SV=1 Back     alignment and function description
>sp|P53537|PHSH_VICFA Alpha-glucan phosphorylase, H isozyme OS=Vicia faba PE=2 SV=1 Back     alignment and function description
>sp|Q9LKJ3|PHSH_WHEAT Alpha-glucan phosphorylase, H isozyme OS=Triticum aestivum PE=2 SV=1 Back     alignment and function description
>sp|Q9LIB2|PHS1_ARATH Alpha-glucan phosphorylase 1 OS=Arabidopsis thaliana GN=PHS1 PE=1 SV=1 Back     alignment and function description
>sp|Q00766|PHS1_DICDI Glycogen phosphorylase 1 OS=Dictyostelium discoideum GN=glpV PE=1 SV=3 Back     alignment and function description
>sp|P34114|PHS2_DICDI Glycogen phosphorylase 2 OS=Dictyostelium discoideum GN=glpD PE=1 SV=2 Back     alignment and function description
>sp|P06738|PHSG_YEAST Glycogen phosphorylase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPH1 PE=1 SV=4 Back     alignment and function description
>sp|Q9XTL9|PYG_DROME Glycogen phosphorylase OS=Drosophila melanogaster GN=GlyP PE=2 SV=2 Back     alignment and function description
>sp|Q9WUB3|PYGM_MOUSE Glycogen phosphorylase, muscle form OS=Mus musculus GN=Pygm PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query799
21063929840 starch phosphorylase type H [Citrus hybr 1.0 0.951 0.994 0.0
255558824849 glycogen phosphorylase, putative [Ricinu 0.981 0.923 0.865 0.0
225434692843 PREDICTED: alpha-glucan phosphorylase, H 1.0 0.947 0.856 0.0
224104329853 predicted protein [Populus trichocarpa] 0.996 0.933 0.851 0.0
449450784844 PREDICTED: alpha-glucan phosphorylase, H 1.0 0.946 0.834 0.0
187370620843 alpha-1,4-glucan phosphorylase H isozyme 1.0 0.947 0.834 0.0
297819302841 alpha-glucan phosphorylase 2 [Arabidopsi 0.996 0.946 0.827 0.0
15232704841 alpha-glucan phosphorylase isozyme H [Ar 0.996 0.946 0.823 0.0
15983803841 AT3g46970/F13I12_20 [Arabidopsis thalian 0.996 0.946 0.822 0.0
356566195846 PREDICTED: alpha-glucan phosphorylase, H 0.998 0.943 0.819 0.0
>gi|21063929|gb|AAM29154.1| starch phosphorylase type H [Citrus hybrid cultivar] Back     alignment and taxonomy information
 Score = 1659 bits (4295), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 795/799 (99%), Positives = 796/799 (99%)

Query: 1   MADAKANGKNEAAKLAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFAT 60
           MADAKANGKNEAAKLAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFAT
Sbjct: 1   MADAKANGKNEAAKLAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFAT 60

Query: 61  AESVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNL 120
           AE VRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNL
Sbjct: 61  AEVVRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNL 120

Query: 121 GHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQ 180
           GHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQ
Sbjct: 121 GHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQ 180

Query: 181 EEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYK 240
           EEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYK
Sbjct: 181 EEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYK 240

Query: 241 TKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRL 300
           TKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRL
Sbjct: 241 TKNTISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRL 300

Query: 301 KQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGL 360
           KQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGL
Sbjct: 301 KQQFFLCSASLQDMILRFKERKSGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGL 360

Query: 361 GWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRS 420
           GWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRS
Sbjct: 361 GWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRS 420

Query: 421 DLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNK 480
           DLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNK
Sbjct: 421 DLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNK 480

Query: 481 LQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESA 540
           LQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESA
Sbjct: 481 LQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESA 540

Query: 541 KMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQE 600
           KMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQE
Sbjct: 541 KMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQE 600

Query: 601 RKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAE 660
           RKKTTPRTIM GGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAE
Sbjct: 601 RKKTTPRTIMFGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAE 660

Query: 661 LLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720
           LLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGA 
Sbjct: 661 LLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAG 720

Query: 721 AEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLV 780
           A+QVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLV
Sbjct: 721 ADQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLV 780

Query: 781 GYDFPSYLEAQDRVDQAYK 799
           GYDFPSYLEAQDRVDQAYK
Sbjct: 781 GYDFPSYLEAQDRVDQAYK 799

Source: Citrus hybrid cultivar

Species: Citrus hybrid cultivar

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255558824|ref|XP_002520435.1| glycogen phosphorylase, putative [Ricinus communis] gi|223540277|gb|EEF41848.1| glycogen phosphorylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225434692|ref|XP_002280732.1| PREDICTED: alpha-glucan phosphorylase, H isozyme [Vitis vinifera] gi|297745953|emb|CBI16009.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224104329|ref|XP_002313399.1| predicted protein [Populus trichocarpa] gi|222849807|gb|EEE87354.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449450784|ref|XP_004143142.1| PREDICTED: alpha-glucan phosphorylase, H isozyme-like [Cucumis sativus] gi|449496617|ref|XP_004160181.1| PREDICTED: alpha-glucan phosphorylase, H isozyme-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|187370620|dbj|BAG31926.1| alpha-1,4-glucan phosphorylase H isozyme [Cucurbita maxima] Back     alignment and taxonomy information
>gi|297819302|ref|XP_002877534.1| alpha-glucan phosphorylase 2 [Arabidopsis lyrata subsp. lyrata] gi|297323372|gb|EFH53793.1| alpha-glucan phosphorylase 2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15232704|ref|NP_190281.1| alpha-glucan phosphorylase isozyme H [Arabidopsis thaliana] gi|14916634|sp|Q9SD76.1|PHS2_ARATH RecName: Full=Alpha-glucan phosphorylase 2, cytosolic; Short=AtPHS2; AltName: Full=Alpha-glucan phosphorylase, H isozyme; AltName: Full=Starch phosphorylase H gi|6522578|emb|CAB61943.1| starch phosphorylase H (cytosolic form)-like protein [Arabidopsis thaliana] gi|19699065|gb|AAL90900.1| AT3g46970/F13I12_20 [Arabidopsis thaliana] gi|27764912|gb|AAO23577.1| At3g46970/F13I12_20 [Arabidopsis thaliana] gi|332644704|gb|AEE78225.1| alpha-glucan phosphorylase isozyme H [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15983803|gb|AAL10498.1| AT3g46970/F13I12_20 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356566195|ref|XP_003551320.1| PREDICTED: alpha-glucan phosphorylase, H isozyme-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query799
TAIR|locus:2075576841 PHS2 "alpha-glucan phosphoryla 0.996 0.946 0.799 0.0
TAIR|locus:2093787962 PHS1 "alpha-glucan phosphoryla 0.538 0.446 0.578 7.6e-273
UNIPROTKB|P53535974 STP-1 "Alpha-1,4 glucan phosph 0.471 0.387 0.661 3.3e-272
UNIPROTKB|P04045 966 P04045 "Alpha-1,4 glucan phosp 0.509 0.421 0.598 7.8e-271
DICTYBASE|DDB_G0281383853 glpV "glycogen phosphorylase b 0.952 0.892 0.496 1.8e-206
ASPGD|ASPL0000059322879 AN1015 [Emericella nidulans (t 0.919 0.836 0.504 2.1e-196
DICTYBASE|DDB_G0291123 993 glpD "glycogen phosphorylase a 0.933 0.751 0.482 1e-194
UNIPROTKB|G4MW66888 MGG_01819 "Phosphorylase" [Mag 0.919 0.827 0.489 1.1e-188
CGD|CAL0001970900 GPH1 [Candida albicans (taxid: 0.952 0.845 0.459 3.5e-178
UNIPROTKB|Q5AFP7900 GPH1 "Phosphorylase" [Candida 0.952 0.845 0.459 3.5e-178
TAIR|locus:2075576 PHS2 "alpha-glucan phosphorylase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3437 (1214.9 bits), Expect = 0., P = 0.
 Identities = 639/799 (79%), Positives = 708/799 (88%)

Query:     4 AKANGKNEXXXXXXXXXXXXXXXXEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAES 63
             A ANGK                  + + IA NI YH +YSPHFSP KF PEQA +ATAES
Sbjct:     2 ANANGKAATSLPEKISAKANPEADDATEIAGNIVYHAKYSPHFSPLKFGPEQALYATAES 61

Query:    64 VRDRLIQQWNETYHHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHV 123
             +RDRLIQ WNETY HFNKVDPKQTYYLSME+LQGR LTNAIG+L++Q  YADAL  LG+ 
Sbjct:    62 LRDRLIQLWNETYVHFNKVDPKQTYYLSMEYLQGRALTNAIGNLNLQGPYADALRTLGYE 121

Query:   124 LEEIAEQEKDXXXXXXXXXXXXSCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEV 183
             LEEIAEQEKD            SCFLDSMATLNLPAWGYGLRYR+GLFKQ ITK+GQEE+
Sbjct:   122 LEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRHGLFKQIITKKGQEEI 181

Query:   184 AEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKN 243
              EDWLEKFSPWE+VRHDVVFPVRFFG V VNP+G+RKWV G+VVQA+AYD+PIPGY TKN
Sbjct:   182 PEDWLEKFSPWEIVRHDVVFPVRFFGKVQVNPDGSRKWVDGDVVQALAYDVPIPGYGTKN 241

Query:   244 TISLRLWDAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQ 303
             TISLRLW+AKA AED +LFQFN+G+YE AAQLHSRAQQIC VLYPGD+TE GKLLRLKQQ
Sbjct:   242 TISLRLWEAKARAEDLDLFQFNEGEYELAAQLHSRAQQICTVLYPGDATENGKLLRLKQQ 301

Query:   304 FFLCSASLQDMILRFKERKS---GRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGL 360
             FFLCSASLQD+I RF ER +    R+WSEFPSKVAVQ+NDTHPTLAIPELMRLLMD+ GL
Sbjct:   302 FFLCSASLQDIISRFHERSTTEGSRKWSEFPSKVAVQMNDTHPTLAIPELMRLLMDDNGL 361

Query:   361 GWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRS 420
             GWDEAWD+T++TVAYTNHTVLPEALEKWSQ++MWKLLPRHMEIIEEIDKRF+  +R TR 
Sbjct:   362 GWDEAWDVTSKTVAYTNHTVLPEALEKWSQSLMWKLLPRHMEIIEEIDKRFVQTIRDTRV 421

Query:   421 DLESKIPSMCILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNK 480
             DLE KI S+ ILDNNP+KPVVRMANLCVVS+HTVNGVAQLHSDILKA+LFADYVS+WPNK
Sbjct:   422 DLEDKISSLSILDNNPQKPVVRMANLCVVSSHTVNGVAQLHSDILKAELFADYVSIWPNK 481

Query:   481 LQNKTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESA 540
              QNKTNGITPRRWLRFC+PELS IITKWLKTD+W+T+LDLL GLRQFADN ELQ+EW SA
Sbjct:   482 FQNKTNGITPRRWLRFCSPELSDIITKWLKTDKWITDLDLLTGLRQFADNEELQSEWASA 541

Query:   541 KMASKKHLADYIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQE 600
             K A+KK LA YI RVTGV+IDP SLFDIQVKRIHEYKRQL+NILG +YR+KKLKEM P+E
Sbjct:   542 KTANKKRLAQYIERVTGVSIDPTSLFDIQVKRIHEYKRQLMNILGVVYRFKKLKEMKPEE 601

Query:   601 RKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAE 660
             RKKT PRT+MIGGKAFATYTNAKRIVKLVNDVG+VVN+DPEVN YLKVVFVPNYNV+VAE
Sbjct:   602 RKKTVPRTVMIGGKAFATYTNAKRIVKLVNDVGDVVNSDPEVNEYLKVVFVPNYNVTVAE 661

Query:   661 LLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAV 720
             +LIPGSELSQHISTAGMEASGTSNMKF+LNGCLIIGTLDGANVEIR+E+GEENFFLFGA 
Sbjct:   662 MLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEVGEENFFLFGAT 721

Query:   721 AEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLV 780
             A+QVP+LRKEREDGLFKPDPRFEEAKQF++SG FGSYDY PLLDSLEGNTG+GRGDYFLV
Sbjct:   722 ADQVPRLRKEREDGLFKPDPRFEEAKQFVKSGVFGSYDYGPLLDSLEGNTGFGRGDYFLV 781

Query:   781 GYDFPSYLEAQDRVDQAYK 799
             GYDFPSY++AQ +VD+AYK
Sbjct:   782 GYDFPSYMDAQAKVDEAYK 800
GO:0004645 "phosphorylase activity" evidence=IEA;ISS;IDA
GO:0005737 "cytoplasm" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0030170 "pyridoxal phosphate binding" evidence=IEA
GO:0005829 "cytosol" evidence=IDA;TAS
GO:0009414 "response to water deprivation" evidence=IMP
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0009507 "chloroplast" evidence=IDA
GO:0019252 "starch biosynthetic process" evidence=RCA
TAIR|locus:2093787 PHS1 "alpha-glucan phosphorylase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P53535 STP-1 "Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic" [Solanum tuberosum (taxid:4113)] Back     alignment and assigned GO terms
UNIPROTKB|P04045 P04045 "Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic" [Solanum tuberosum (taxid:4113)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0281383 glpV "glycogen phosphorylase b" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ASPGD|ASPL0000059322 AN1015 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0291123 glpD "glycogen phosphorylase a" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|G4MW66 MGG_01819 "Phosphorylase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
CGD|CAL0001970 GPH1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5AFP7 GPH1 "Phosphorylase" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9Z8N1PHSG_CHLPN2, ., 4, ., 1, ., 10.45200.92610.8980yesno
Q9PKE6PHSG_CHLMU2, ., 4, ., 1, ., 10.43020.92360.9077yesno
P00489PYGM_RABIT2, ., 4, ., 1, ., 10.46650.95110.9015yesno
Q00766PHS1_DICDI2, ., 4, ., 1, ., 10.51210.95740.8968yesno
P0AC87PHSG_SHIFL2, ., 4, ., 1, ., 10.44080.93990.9214yesno
P06738PHSG_YEAST2, ., 4, ., 1, ., 10.47690.91860.8137yesno
Q9CN90PHSG_PASMU2, ., 4, ., 1, ., 10.43360.95110.9290yesno
Q9XTL9PYG_DROME2, ., 4, ., 1, ., 10.46400.95110.9004yesno
Q9SD76PHS2_ARATH2, ., 4, ., 1, ., 10.82350.99620.9464yesno
P79334PYGM_BOVIN2, ., 4, ., 1, ., 10.46270.95110.9026yesno
Q9LKJ3PHSH_WHEAT2, ., 4, ., 1, ., 10.81040.97990.9411N/Ano
P32811PHSH_SOLTU2, ., 4, ., 1, ., 10.82610.98620.9403N/Ano
Q9WUB3PYGM_MOUSE2, ., 4, ., 1, ., 10.46910.95110.9026yesno
O84250PHSG_CHLTR2, ., 4, ., 1, ., 10.44540.92490.9078yesno
P45180PHSG_HAEIN2, ., 4, ., 1, ., 10.44050.94360.9183yesno
P53537PHSH_VICFA2, ., 4, ., 1, ., 10.81170.99620.9453N/Ano
P39123PHSG_BACSU2, ., 4, ., 1, ., 10.43010.89110.8922yesno
P11217PYGM_HUMAN2, ., 4, ., 1, ., 10.47040.95110.9026yesno
P09812PYGM_RAT2, ., 4, ., 1, ., 10.46010.95110.9026yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.983
4th Layer2.4.1.10.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_IX1158
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity) (853 aa)
(Populus trichocarpa)
Predicted Functional Partners:
eugene3.00280310
SubName- Full=Starch branching enzyme II; (730 aa)
• •• •• 0.976
fgenesh4_pg.C_LG_V001651
SubName- Full=Starch branching enzyme I; (701 aa)
• •• •• 0.969
gw1.XV.361.1
hypothetical protein (586 aa)
• •  •• 0.961
gw1.164.92.1
hypothetical protein (387 aa)
• •  •• 0.953
fgenesh4_pm.C_LG_XIV000240
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (445 aa)
• •  •• 0.943
gw1.XVII.1126.1
hypothetical protein (688 aa)
• •  •• 0.942
gw1.V.1420.1
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27); This protein plays a role in synthesis o [...] (475 aa)
• •  •• 0.940
eugene3.00141188
RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (523 aa)
• •  •• 0.937
gw1.170.63.1
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27) (428 aa)
• •  •• 0.937
gw1.VII.320.1
glucose-1-phosphate adenylyltransferase (EC-2.7.7.27) (434 aa)
• •  •• 0.935

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query799
cd04300797 cd04300, GT1_Glycogen_Phosphorylase, This is a fam 0.0
TIGR02093794 TIGR02093, P_ylase, glycogen/starch/alpha-glucan p 0.0
pfam00343712 pfam00343, Phosphorylase, Carbohydrate phosphoryla 0.0
PRK14985798 PRK14985, PRK14985, maltodextrin phosphorylase; Pr 0.0
COG0058750 COG0058, GlgP, Glucan phosphorylase [Carbohydrate 0.0
PRK14986815 PRK14986, PRK14986, glycogen phosphorylase; Provis 0.0
TIGR02094601 TIGR02094, more_P_ylases, alpha-glucan phosphoryla 4e-28
cd04299778 cd04299, GT1_Glycogen_Phosphorylase_like, This fam 1e-23
>gnl|CDD|99996 cd04300, GT1_Glycogen_Phosphorylase, This is a family of oligosaccharide phosphorylases Back     alignment and domain information 
 Score = 1219 bits (3157), Expect = 0.0
 Identities = 414/775 (53%), Positives = 522/775 (67%), Gaps = 21/775 (2%)

Query: 33  ASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYLSM 92
              I  H++Y+    P +      + A A +VRDRL+++WN T  ++   D K+ YYLS+
Sbjct: 1   KKAIVDHLEYTLGKDPEEATDRDLYQALAYAVRDRLVERWNRTQQYYYDKDAKRVYYLSL 60

Query: 93  EFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSM 152
           EFL GR L N + +L + +   +AL  LG  LE++ EQE DA LGNGGLGRLA+CFLDS+
Sbjct: 61  EFLMGRLLGNNLLNLGLYDEVREALAELGVDLEDLEEQEPDAGLGNGGLGRLAACFLDSL 120

Query: 153 ATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVM 212
           ATL LP +GYG+RY YGLFKQKI    Q E+ ++WL   +PWE+ R DV  PVRF G V 
Sbjct: 121 ATLGLPGYGYGIRYEYGLFKQKIVDGYQVELPDNWLRYGNPWEIRRPDVAVPVRFGGRVE 180

Query: 213 VNPNGTR---KWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASAEDFNLFQFNDGQY 269
              +G R   +WV GE V AV YD PIPGY T    +LRLW A+AS E+F+L  FN G Y
Sbjct: 181 HYEDGGRLRVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAEAS-EEFDLDAFNRGDY 239

Query: 270 ESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKSGRQWSE 329
             A +  +RA+ I  VLYP DSTEEGK LRLKQQ+F  SASLQD+I RFK  K+    SE
Sbjct: 240 IRAVEEKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFK--KTHGPLSE 297

Query: 330 FPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWS 389
           FP KVA+QLNDTHP LAIPELMR+L+DEEGL WDEAWDITT+T AYTNHT+LPEALEKW 
Sbjct: 298 FPDKVAIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWP 357

Query: 390 QAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKPVVRMANLCVV 449
             +  +LLPRH+EII EI++RF+  VR+     E +I  M I++   +K  VRMA+L +V
Sbjct: 358 VDLFERLLPRHLEIIYEINRRFLEEVRAKYPGDEDRIRRMSIIEEGGEK-QVRMAHLAIV 416

Query: 450 SAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITPRRWLRFCNPELSKIITKWL 509
            +H+VNGVA LHS++LK  +F D+  L+P K  NKTNGITPRRWL   NP LS +IT+ +
Sbjct: 417 GSHSVNGVAALHSELLKETVFKDFYELYPEKFNNKTNGITPRRWLLQANPGLSALITETI 476

Query: 510 KTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPNSLFDIQ 569
             D WVT+LD L  L  FAD+     E+ + K A+K+ LA YI + TGV +DP+SLFD+Q
Sbjct: 477 GDD-WVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDVQ 535

Query: 570 VKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLV 629
           VKRIHEYKRQLLN+L  I+ Y ++KE          PRT + GGKA   Y  AK I+KL+
Sbjct: 536 VKRIHEYKRQLLNVLHIIHLYNRIKENPN---ADIVPRTFIFGGKAAPGYYMAKLIIKLI 592

Query: 630 NDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSL 689
           N V +VVN DP+V   LKVVF+PNYNVS+AE +IP ++LS+ ISTAG EASGT NMKF L
Sbjct: 593 NAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFML 652

Query: 690 NGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKEREDG--LFKPDPRFEEAKQ 747
           NG L IGTLDGANVEI +E+GEEN F+FG  AE+V  LR         ++ DP       
Sbjct: 653 NGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEALRANGYYPADYYEADPELRRVLD 712

Query: 748 FIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYK 799
            I SG F   D   + PL+DSL         D +LV  DF SY++AQ++VD  Y+
Sbjct: 713 QIASGFFSPGDPGEFRPLVDSLLNG-----NDEYLVLADFESYVDAQEKVDALYR 762

It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 797
>gnl|CDD|233722 TIGR02093, P_ylase, glycogen/starch/alpha-glucan phosphorylases Back     alignment and domain information
>gnl|CDD|215868 pfam00343, Phosphorylase, Carbohydrate phosphorylase Back     alignment and domain information
>gnl|CDD|237881 PRK14985, PRK14985, maltodextrin phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|223136 COG0058, GlgP, Glucan phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|184948 PRK14986, PRK14986, glycogen phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|233723 TIGR02094, more_P_ylases, alpha-glucan phosphorylases Back     alignment and domain information
>gnl|CDD|99995 cd04299, GT1_Glycogen_Phosphorylase_like, This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 799
KOG2099843 consensus Glycogen phosphorylase [Carbohydrate tra 100.0
TIGR02093794 P_ylase glycogen/starch/alpha-glucan phosphorylase 100.0
cd04300797 GT1_Glycogen_Phosphorylase This is a family of oli 100.0
PRK14985798 maltodextrin phosphorylase; Provisional 100.0
PRK14986815 glycogen phosphorylase; Provisional 100.0
PF00343713 Phosphorylase: Carbohydrate phosphorylase; InterPr 100.0
COG0058750 GlgP Glucan phosphorylase [Carbohydrate transport 100.0
cd04299778 GT1_Glycogen_Phosphorylase_like This family is mos 100.0
TIGR02094601 more_P_ylases alpha-glucan phosphorylases. This fa 100.0
cd03791476 GT1_Glycogen_synthase_DULL1_like This family is mo 99.74
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 99.65
PRK00654466 glgA glycogen synthase; Provisional 99.56
PRK14098489 glycogen synthase; Provisional 99.49
PRK14099485 glycogen synthase; Provisional 99.32
PLN02939977 transferase, transferring glycosyl groups 99.3
PLN023161036 synthase/transferase 98.55
COG0297487 GlgA Glycogen synthase [Carbohydrate transport and 97.8
cd03793590 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, 97.41
PF08323245 Glyco_transf_5: Starch synthase catalytic domain; 97.21
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 96.49
cd03805392 GT1_ALG2_like This family is most closely related 96.36
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 96.32
cd03813475 GT1_like_3 This family is most closely related to 96.2
cd01635229 Glycosyltransferase_GTB_type Glycosyltransferases 96.14
cd03788460 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a 96.13
PF11897118 DUF3417: Protein of unknown function (DUF3417); In 95.97
cd03821375 GT1_Bme6_like This family is most closely related 95.96
cd03796398 GT1_PIG-A_like This family is most closely related 95.89
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 95.26
cd03795357 GT1_like_4 This family is most closely related to 95.08
cd03808359 GT1_cap1E_like This family is most closely related 95.05
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 94.77
PLN00142815 sucrose synthase 94.41
TIGR02470784 sucr_synth sucrose synthase. This model represents 93.79
cd03807365 GT1_WbnK_like This family is most closely related 93.77
cd03811353 GT1_WabH_like This family is most closely related 93.7
cd03801374 GT1_YqgM_like This family is most closely related 93.48
cd03819355 GT1_WavL_like This family is most closely related 93.48
TIGR02400456 trehalose_OtsA alpha,alpha-trehalose-phosphate syn 93.25
cd03817374 GT1_UGDG_like This family is most closely related 93.12
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 93.01
cd03800398 GT1_Sucrose_synthase This family is most closely r 92.98
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 92.82
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 92.7
cd03809365 GT1_mtfB_like This family is most closely related 92.54
cd03818396 GT1_ExpC_like This family is most closely related 91.91
cd03804351 GT1_wbaZ_like This family is most closely related 91.81
cd03812358 GT1_CapH_like This family is most closely related 91.61
cd03798377 GT1_wlbH_like This family is most closely related 91.3
cd04962371 GT1_like_5 This family is most closely related to 91.13
cd03822366 GT1_ecORF704_like This family is most closely rela 91.1
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 90.87
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 90.54
cd03794394 GT1_wbuB_like This family is most closely related 90.53
cd03806419 GT1_ALG11_like This family is most closely related 89.85
PRK15490578 Vi polysaccharide biosynthesis protein TviE; Provi 88.98
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 88.66
PRK15179694 Vi polysaccharide biosynthesis protein TviE; Provi 88.27
cd03823359 GT1_ExpE7_like This family is most closely related 88.01
PRK14501 726 putative bifunctional trehalose-6-phosphate syntha 87.52
PLN02949463 transferase, transferring glycosyl groups 86.11
cd03802335 GT1_AviGT4_like This family is most closely relate 85.63
PLN03063 797 alpha,alpha-trehalose-phosphate synthase (UDP-form 85.22
cd03825365 GT1_wcfI_like This family is most closely related 84.58
cd03816415 GT1_ALG1_like This family is most closely related 84.31
TIGR02468 1050 sucrsPsyn_pln sucrose phosphate synthase/possible 83.88
cd03820348 GT1_amsD_like This family is most closely related 82.28
cd04949372 GT1_gtfA_like This family is most closely related 80.98
cd04955363 GT1_like_6 This family is most closely related to 80.77
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2e-262  Score=2118.12  Aligned_cols=775  Identities=52%  Similarity=0.884  Sum_probs=754.5

Q ss_pred             hhhhhccccccCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCceEEEE
Q 003742           11 EAAKLAKIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETYHHFNKVDPKQTYYL   90 (799)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~l~~~~g~~~~~at~~~~y~Ala~~vRD~l~~~w~~t~~~~~~~~~k~vyYl   90 (799)
                      +.++|+|||+...+...++.+++++|.+|+++++.+++..|++.+.|.|+|++|||.|+.+|++|+|+|.+.++||||||
T Consensus         7 ~~~~r~qis~r~~~~~~~~~e~~~~f~~H~~ftl~k~~~~~~~~~~yfA~a~tvRD~Lv~~W~rTqqhy~~~dpKrvYYL   86 (843)
T KOG2099|consen    7 DSEKRKQISVRGIAGVEDVAEVKKSFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRVYYL   86 (843)
T ss_pred             ccchhhhcchhcccCCccHHHHHHHHHhheeeeeecCcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceeeEe
Confidence            56789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EhhhccccchhHHhhccCcHHHHHHHHHHcCCChHHHHhhccccCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCc
Q 003742           91 SMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGL  170 (799)
Q Consensus        91 SmEfl~Gr~L~nnL~NLgi~~~~~eaL~~lg~~l~~i~~~E~D~~LgnGGLGrLAacfldS~A~LglP~~G~GlrY~~G~  170 (799)
                      ||||+|||+|+|.++||||.+.+.+||.+||+|+|+|.|+|+||||||||||||||||||||||||+|++||||||+||+
T Consensus        87 SlEf~mGRaL~Ntm~Nlglq~~~deAl~qlG~dlEel~e~E~DagLGNGGLGRLAaCFlDSMATlglpA~GYGlRYeyGi  166 (843)
T KOG2099|consen   87 SLEFYMGRALQNTMINLGLQNACDEALYQLGLDLEELEEQEEDAGLGNGGLGRLAACFLDSMATLGLPAYGYGLRYEYGI  166 (843)
T ss_pred             ehHHhhhhHHHHHHHhccCcchhHHHHHHhCcCHHHHHhcCcCcCcCCcchHHHHHHHHHHHhhcCCccccccceeehhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEecCCceeeccccccccCCCcccccCCeeEEEEeCCeEEEcCCCceeeeCCeEEEEEEeeeccCCCCCCceEEEEEE
Q 003742          171 FKQKITKQGQEEVAEDWLEKFSPWEVVRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLW  250 (799)
Q Consensus       171 F~Q~I~dG~QvE~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~g~~~w~~~~~v~av~yd~pi~gy~~~~~n~lRLW  250 (799)
                      |+|+|.+|||+|.||+||+.|||||+.|+++++||+|||+|+..++| .+|++++.|.|+|||+|||||.|++||+||||
T Consensus       167 F~QkI~~g~Q~E~~ddWL~~gnPWE~~R~e~~lPV~FyGkV~~~~~g-~kWid~q~V~A~~YD~PvPGyk~n~vntlRLW  245 (843)
T KOG2099|consen  167 FKQKITDGWQVEEPDDWLRYGNPWEKARPEVMLPVHFYGKVEHTPDG-SKWIDTQVVLAMPYDTPVPGYKNNTVNTLRLW  245 (843)
T ss_pred             HHHHhcCCccccchHHHHHcCCchhhcCcceEeEEEEEEEEEeCCCc-ceeecceeEEEeccCCCCCCcccCcceeeeee
Confidence            99999999999999999999999999999999999999999988788 57999999999999999999999999999999


Q ss_pred             eeccCCccccccccCcchhhhHhhhhhhhhccccccccCCCcchhhhhhhhhhhhhhhchHHHHHHHHHHccC------C
Q 003742          251 DAKASAEDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMILRFKERKS------G  324 (799)
Q Consensus       251 ~a~v~~~~~~l~~~~~g~y~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRLkQEyfl~~a~lqdiir~~~~~~g------~  324 (799)
                      +|+ ++.+|||..||.|+|++|+..++.+|+||+||||+|+..+||+||||||||+|+||||||||||+...+      .
T Consensus       246 sak-a~~df~l~~fN~Gdy~~av~~~~~AenI~~VLYPnDnf~eGKeLRLKQqyf~caAtLqDIirRFk~sk~~~r~~~~  324 (843)
T KOG2099|consen  246 SAK-APNDFDLKDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQQYFLCAATLQDIIRRFKSSKFGCREPVR  324 (843)
T ss_pred             ccC-CCCCCCHHhccCchHHHHHHHHHhhhhceEEecCCCccccchhhhhhhhhhhhHHHHHHHHHHHhhcccCcccccc
Confidence            999 878999999999999999999999999999999999999999999999999999999999999985432      2


Q ss_pred             ccccCCCCceeEEeCCCcccccHHHHHHHHHhhcCCCHHHHHHHhccceEeeecCCCcchhccccHHHHHHhchhHHHHH
Q 003742          325 RQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITTRTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEII  404 (799)
Q Consensus       325 ~~l~~l~~~~~ihlNdtHpalai~ElmR~L~de~gl~~~~A~~iv~~~~~yTnHT~~pealE~w~~~l~~~llpr~~~ii  404 (799)
                      ..|++||++++||||||||+||||||||+|||.+|++|++||+||.+||+|||||++|||||+||++||+++||||+|||
T Consensus       325 ~~~~~FPdkVAiQlNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEALErWp~~L~e~LLPRHleII  404 (843)
T KOG2099|consen  325 TNFEEFPDKVAIQLNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEALERWPVSLMEKLLPRHLEII  404 (843)
T ss_pred             cchhhCcHhheeeccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHHHHhhHHHHHHhhhHHHHHH
Confidence            34999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCChhhhccccccccCCCCC-eeeEeeeccccCcchHHHHHHhHHHHHHhhhhhhhhhcCCCccc
Q 003742          405 EEIDKRFIAMVRSTRSDLESKIPSMCILDNNPKKP-VVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQN  483 (799)
Q Consensus       405 ~~In~~f~~~~~~~~~~~~~~~~~l~ii~~~~~~~-~v~Ma~Lai~~S~~vNGVS~lH~ei~k~~~f~~f~~l~P~kf~n  483 (799)
                      |+||.+|++.+.+.||.|.|++++|||+++++ ++ ++|||+||+++||.||||++||++|+|+.+|+||+++||+||+|
T Consensus       405 y~In~~~l~~i~~~fp~D~drlrrmsiiee~~-~~k~i~MA~L~ivgsHaVNGVa~iHSeilK~~~F~Df~e~~P~KFqN  483 (843)
T KOG2099|consen  405 YEINQRFLQTVAAKFPGDVDRLRRMSIIEENS-PEKRINMAHLCIVGSHAVNGVAEIHSEILKQSVFKDFYELEPEKFQN  483 (843)
T ss_pred             HHHHHHHHHHHHHHCCCcHHHHhhhhhhhcCC-ccceeeeeeeeeecccccccHHHHHHHHHHHHHHHHHHHhChHHhcc
Confidence            99999999999999999999999999999832 23 99999999999999999999999999999999999999999999


Q ss_pred             cccccCccccccccChhHHHHHHHhcCCcccccCcchHHhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCC
Q 003742          484 KTNGITPRRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLADYIWRVTGVTIDPN  563 (799)
Q Consensus       484 iTNGV~~rrWl~~~np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~D~~~~~~~~~vk~~nK~~L~~~i~~~~g~~ldp~  563 (799)
                      +||||||||||..|||.|++||++.|| ++|++|+++|.+|+++++|++|+++|+++|++||.+|++||++.+|+.+||+
T Consensus       484 kTNGITPRRWL~~cnP~LadlI~e~ig-e~~i~dl~~l~~L~~~a~d~~f~~~~a~vK~~NKlk~a~~le~e~~v~inp~  562 (843)
T KOG2099|consen  484 KTNGITPRRWLLLCNPGLADLITEKIG-EEWITDLDQLTKLRKFADDEEFQREWAKVKQENKLKLAAYLEKEYGVKINPS  562 (843)
T ss_pred             ccCCcCHHHHHHhcCchHHHHHHHHhh-hHhhhhHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHHHHHHhCcccCcc
Confidence            999999999999999999999999999 5999999999999999999999999999999999999999999999999999


Q ss_pred             ceeeccccccccchhhhhhhhhHHHHHHHHHhcCcCCCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHHhhhhcCCcccC
Q 003742          564 SLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIMIGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVN  643 (799)
Q Consensus       564 slfd~~~kR~heYKRq~Lnil~ii~~y~~i~~~~~~~~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~~~  643 (799)
                      ||||+|+||+||||||+||+||+++||++||+ +|..  ..+|||.||||||+|||+|||.|||||++||++|||||.|.
T Consensus       563 smFDiqVKRIHEYKRQllN~l~vi~~y~riK~-e~~k--~fvprtvm~GGKaapgY~mAK~Iiklit~V~dvVN~Dp~vg  639 (843)
T KOG2099|consen  563 SMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKE-EPAK--AFVPRTVMIGGKAAPGYHMAKLIIKLITAVADVVNNDPEVG  639 (843)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhh--ccCceEEEEcCccCchhHHHHHHHHHHHHHHHHhcCChhhh
Confidence            99999999999999999999999999999999 7763  68999999999999999999999999999999999999999


Q ss_pred             CcceEEEecCCChhhhhhcccccccccccCCCccccCCCcccceeccCceEEEeccCcchhhhhhccccchhhccccccc
Q 003742          644 SYLKVVFVPNYNVSVAELLIPGSELSQHISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQ  723 (799)
Q Consensus       644 ~~lkVvFlenY~vslAe~lipa~Dv~~qis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vg~en~~iFg~~~~e  723 (799)
                      ++|||||+|||+||+||+||||+|+|+||||||+||||||||||||||+|||||||||||||+|++|+||+||||+++|+
T Consensus       640 d~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANVEm~eE~GeeN~FiFG~~~e~  719 (843)
T KOG2099|consen  640 DRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEMAEEAGEENFFIFGMRVED  719 (843)
T ss_pred             heeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccchHHHHHcCcccEEEecccHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhccCCCC---CCCChHHHHHHHHHHcCCCCCCC---cHHHHHHHhhCCCCCCCCeeeecCccHHHHHHHHHHHhh
Q 003742          724 VPKLRKEREDGL---FKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQA  797 (799)
Q Consensus       724 v~~l~~~~~y~~---~~~~~~i~~v~d~i~~g~f~~~~---f~~i~~~l~~~~~~~~~D~y~vl~Df~sy~~~q~~v~~~  797 (799)
                      |..|+++| |+.   +...|+++.|+++|.+|.|+|.+   |++|.++|..+      |+|+|++||+||++||++|+++
T Consensus       720 V~~L~k~g-y~a~~~~~~~P~l~~v~~~i~sG~Fsp~~pd~fkd~~~~l~~h------D~f~V~~Df~sYi~~q~kVd~~  792 (843)
T KOG2099|consen  720 VEALRKKG-YNAQEYYDPLPELKQVIDQIESGFFSPKNPDEFKDIVNMLMYH------DYFLVFADFEAYIKCQEKVDQL  792 (843)
T ss_pred             HHHHHhhc-ccccccCCCCchHHHHHHHHhcCccCCCCchHHHHHHHhhhcc------ceEEeeCcHHHHHHHHHHHHHH
Confidence            99999887 665   45589999999999999999988   99999999985      9999999999999999999999


Q ss_pred             hC
Q 003742          798 YK  799 (799)
Q Consensus       798 y~  799 (799)
                      |+
T Consensus       793 y~  794 (843)
T KOG2099|consen  793 YR  794 (843)
T ss_pred             Hh
Confidence            95

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases Back     alignment and domain information
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases Back     alignment and domain information
>PRK14985 maltodextrin phosphorylase; Provisional Back     alignment and domain information
>PRK14986 glycogen phosphorylase; Provisional Back     alignment and domain information
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information
>TIGR02094 more_P_ylases alpha-glucan phosphorylases Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information
>PLN02316 synthase/transferase Back     alignment and domain information
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis Back     alignment and domain information
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor Back     alignment and domain information
>PF11897 DUF3417: Protein of unknown function (DUF3417); InterPro: IPR024517 This domain of unknown function is found at the N terminus of members of the glycogen phosphorylase family Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>PLN00142 sucrose synthase Back     alignment and domain information
>TIGR02470 sucr_synth sucrose synthase Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query799
1ygp_B879 Phosphorylated Form Of Yeast Glycogen Phosphorylase 0.0
1z8d_A842 Crystal Structure Of Human Muscle Glycogen Phosphor 0.0
2gj4_A824 Structure Of Rabbit Muscle Glycogen Phosphorylase I 0.0
2gm9_A825 Structure Of Rabbit Muscle Glycogen Phosphorylase I 0.0
2ffr_A825 Crystallographic Studies On N-Azido-Beta-D-Glucopyr 0.0
1c8l_A842 Synergistic Inhibition Of Glycogen Phosphorylase A 0.0
1pyg_A842 Structural Basis For The Activation Of Glycogen Pho 0.0
7gpb_A842 Structural Mechanism For Glycogen Phosphorylase Con 0.0
1c50_A830 Identification And Structural Characterization Of A 0.0
1abb_A828 Control Of Phosphorylase B Conformation By A Modifi 0.0
1gpa_A842 Structural Mechanism For Glycogen Phosphorylase Con 0.0
4ej2_A825 Crystal Structure Of Gpb In Complex With Dk10 Lengt 0.0
2pyd_A843 The Crystal Structure Of Glycogen Phosphorylase In 0.0
3nc4_A841 The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbaz 0.0
2g9q_A842 The Crystal Structure Of The Glycogen Phosphorylase 0.0
1noi_A842 Complex Of Glycogen Phosphorylase With A Transition 0.0
1z6p_A842 Glycogen Phosphorylase Amp Site Inhibitor Complex L 0.0
2zb2_A849 Human Liver Glycogen Phosphorylase A Complexed With 1e-179
1fc0_A846 Human Liver Glycogen Phosphorylase Complexed With N 1e-179
3dds_A848 Crystal Structure Of Glycogen Phosphorylase Complex 1e-179
1fa9_A846 Human Liver Glycogen Phosphorylase A Complexed With 1e-179
1em6_A847 Human Liver Glycogen Phosphorylase A Complexed With 1e-179
2qll_A847 Human Liver Glycogen Phosphorylase- Gl Complex Leng 1e-179
3ceh_A809 Human Liver Glycogen Phosphorylase (Tense State) In 1e-179
1xoi_A846 Human Liver Glycogen Phosphorylase A Complexed With 1e-179
1l5v_A796 Crystal Structure Of The Maltodextrin Phosphorylase 1e-162
1qm5_A796 Phosphorylase Recognition And Phosphorylysis Of Its 1e-162
1ahp_A797 Oligosaccharide Substrate Binding In Escherichia Co 1e-160
2ecp_A796 The Crystal Structure Of The E. Coli Maltodextrin P 1e-160
2c4m_A796 Starch Phosphorylase: Structural Studies Explain Ox 1e-157
>pdb|1Z8D|A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose Length = 842 Back     alignment and structure
>pdb|2GJ4|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand Length = 824 Back     alignment and structure
>pdb|2GM9|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Thienopyrrole Length = 825 Back     alignment and structure
>pdb|2FFR|A Chain A, Crystallographic Studies On N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D- Glucopyranosylamine Length = 825 Back     alignment and structure
>pdb|1C8L|A Chain A, Synergistic Inhibition Of Glycogen Phosphorylase A By A Potential Antidiabetic Drug And Caffeine Length = 842 Back     alignment and structure
>pdb|1PYG|A Chain A, Structural Basis For The Activation Of Glycogen Phosphorylase B By Adenosine Monophosphate Length = 842 Back     alignment and structure
>pdb|7GPB|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By Phosphorylation And Amp Length = 842 Back     alignment and structure
>pdb|1C50|A Chain A, Identification And Structural Characterization Of A Novel Allosteric Binding Site Of Glycogen Phosphorylase B Length = 830 Back     alignment and structure
>pdb|1ABB|A Chain A, Control Of Phosphorylase B Conformation By A Modified Cofactor: Crystallographic Studies On R-State Glycogen Phosphorylase Reconstituted With Pyridoxal 5'-Diphosphate Length = 828 Back     alignment and structure
>pdb|1GPA|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By Phosphorylation And Amp Length = 842 Back     alignment and structure
>pdb|4EJ2|A Chain A, Crystal Structure Of Gpb In Complex With Dk10 Length = 825 Back     alignment and structure
>pdb|2PYD|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex With Glucose At 100 K Length = 843 Back     alignment and structure
>pdb|3NC4|A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone Derivatives To Glycogen Phosphorylase: A New Class Of Inhibitors Length = 841 Back     alignment and structure
>pdb|2G9Q|A Chain A, The Crystal Structure Of The Glycogen Phosphorylase B- 1ab Complex Length = 842 Back     alignment and structure
>pdb|1NOI|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State Analogue Nojirimycin Tetrazole And Phosphate In The T And R States Length = 842 Back     alignment and structure
>pdb|1Z6P|A Chain A, Glycogen Phosphorylase Amp Site Inhibitor Complex Length = 842 Back     alignment and structure
>pdb|2ZB2|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcose And 5- Chloro-N-[4-(1, 2-Dihydroxyethyl)phenyl]-1h-Indole-2-Carboxamide Length = 849 Back     alignment and structure
>pdb|1FC0|A Chain A, Human Liver Glycogen Phosphorylase Complexed With N-Acetyl-Beta-D- Glucopyranosylamine Length = 846 Back     alignment and structure
>pdb|3DDS|A Chain A, Crystal Structure Of Glycogen Phosphorylase Complexed With An Anthranilimide Based Inhibitor Gsk261 Length = 848 Back     alignment and structure
>pdb|1FA9|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Amp Length = 846 Back     alignment and structure
>pdb|1EM6|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcnac And Cp-526, 423 Length = 847 Back     alignment and structure
>pdb|2QLL|A Chain A, Human Liver Glycogen Phosphorylase- Gl Complex Length = 847 Back     alignment and structure
>pdb|3CEH|A Chain A, Human Liver Glycogen Phosphorylase (Tense State) In Complex With The Allosteric Inhibitor Ave5688 Length = 809 Back     alignment and structure
>pdb|1XOI|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Chloroindoloyl Glycine Amide Length = 846 Back     alignment and structure
>pdb|1L5V|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase Complexed With Glucose-1-Phosphate Length = 796 Back     alignment and structure
>pdb|1QM5|A Chain A, Phosphorylase Recognition And Phosphorylysis Of Its Oligosaccharide Substrate: Answers To A Long Outstanding Question Length = 796 Back     alignment and structure
>pdb|1AHP|A Chain A, Oligosaccharide Substrate Binding In Escherichia Coli Maltodextrin Phsphorylase Length = 797 Back     alignment and structure
>pdb|2ECP|A Chain A, The Crystal Structure Of The E. Coli Maltodextrin Phosphorylase Complex Length = 796 Back     alignment and structure
>pdb|2C4M|A Chain A, Starch Phosphorylase: Structural Studies Explain Oxyanion- Dependent Kinetic Stability And Regulatory Control. Length = 796 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query799
2gj4_A824 Glycogen phosphorylase, muscle form; transferase; 0.0
1ygp_A879 Yeast glycogen phosphorylase; phosphorylated form, 0.0
1l5w_A796 Maltodextrin phosphorylase; enzymatic catalysis, s 0.0
2c4m_A796 Glycogen phosphorylase; allosteric control, phosph 0.0
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-05
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Length = 824 Back     alignment and structure
 Score = 1228 bits (3180), Expect = 0.0
 Identities = 361/794 (45%), Positives = 495/794 (62%), Gaps = 24/794 (3%)

Query: 17  KIPAAANPLANEPSAIASNISYHVQYSPHFSPTKFEPEQAFFATAESVRDRLIQQWNETY 76
           +I           + +  N + H+ ++         P   +FA A +VRD L+ +W  T 
Sbjct: 1   QISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQ 60

Query: 77  HHFNKVDPKQTYYLSMEFLQGRTLTNAIGSLDIQNAYADALNNLGHVLEEIAEQEKDAAL 136
            H+ + DPK+ YYLS+EF  GRTL N + +L ++NA  +A   LG  +EE+ E E+DA L
Sbjct: 61  QHYYEKDPKRIYYLSLEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGL 120

Query: 137 GNGGLGRLASCFLDSMATLNLPAWGYGLRYRYGLFKQKITKQGQEEVAEDWLEKFSPWEV 196
           GNGGLGRLA+CFLDSMATL L A+GYG+RY +G+F QKI    Q E A+DWL   +PWE 
Sbjct: 121 GNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEK 180

Query: 197 VRHDVVFPVRFFGSVMVNPNGTRKWVGGEVVQAVAYDIPIPGYKTKNTISLRLWDAKASA 256
            R +   PV F+G V     G + WV  +VV A+ YD P+PGY+     ++RLW AKA  
Sbjct: 181 ARPEFTLPVHFYGRVEHTSQGAK-WVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAP- 238

Query: 257 EDFNLFQFNDGQYESAAQLHSRAQQICAVLYPGDSTEEGKLLRLKQQFFLCSASLQDMIL 316
            DFNL  FN G Y  A    + A+ I  VLYP D+  EGK LRLKQ++F+ +A+LQD+I 
Sbjct: 239 NDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIR 298

Query: 317 RFKERK------SGRQWSEFPSKVAVQLNDTHPTLAIPELMRLLMDEEGLGWDEAWDITT 370
           RFK  K          +  FP KVA+QLNDTHP+LAIPELMR+L+D E L WD+AW++T 
Sbjct: 299 RFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTV 358

Query: 371 RTVAYTNHTVLPEALEKWSQAVMWKLLPRHMEIIEEIDKRFIAMVRSTRSDLESKIPSMC 430
           +T AYTNHTVLPEALE+W   ++  LLPRH++II EI++RF+  V +       ++  M 
Sbjct: 359 KTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMS 418

Query: 431 ILDNNPKKPVVRMANLCVVSAHTVNGVAQLHSDILKADLFADYVSLWPNKLQNKTNGITP 490
           +++    K  + MA+LC+  +H VNGVA++HS+ILK  +F D+  L P+K QNKTNGITP
Sbjct: 419 LVEEGAVK-RINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITP 477

Query: 491 RRWLRFCNPELSKIITKWLKTDQWVTNLDLLVGLRQFADNTELQAEWESAKMASKKHLAD 550
           RRWL  CNP L++II + +  + ++++LD L  L  + D+     +    K  +K   A 
Sbjct: 478 RRWLVLCNPGLAEIIAERIGEE-YISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAA 536

Query: 551 YIWRVTGVTIDPNSLFDIQVKRIHEYKRQLLNILGAIYRYKKLKEMSPQERKKTTPRTIM 610
           Y+ R   V I+PNSLFD+QVKRIHEYKRQLLN L  I  Y ++K+   +  K   PRT+M
Sbjct: 537 YLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK---EPNKFVVPRTVM 593

Query: 611 IGGKAFATYTNAKRIVKLVNDVGEVVNTDPEVNSYLKVVFVPNYNVSVAELLIPGSELSQ 670
           IGGKA   Y  AK I+KL+  +G+VVN DP V   L+V+F+ NY VS+AE +IP ++LS+
Sbjct: 594 IGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSE 653

Query: 671 HISTAGMEASGTSNMKFSLNGCLIIGTLDGANVEIRQEIGEENFFLFGAVAEQVPKLRKE 730
            ISTAG EASGT NMKF LNG L IGT+DGANVE+ +E GEENFF+FG   E V +L + 
Sbjct: 654 QISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQR 713

Query: 731 REDG--LFKPDPRFEEAKQFIRSGAFGSYD---YNPLLDSLEGNTGYGRGDYFLVGYDFP 785
             +    +   P   +  + + SG F       +  +++ L  +      D F V  D+ 
Sbjct: 714 GYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHH------DRFKVFADYE 767

Query: 786 SYLEAQDRVDQAYK 799
            Y++ Q+RV   YK
Sbjct: 768 EYVKCQERVSALYK 781
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Length = 796 Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Length = 796 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query799
1ygp_A879 Yeast glycogen phosphorylase; phosphorylated form, 100.0
2gj4_A824 Glycogen phosphorylase, muscle form; transferase; 100.0
1l5w_A796 Maltodextrin phosphorylase; enzymatic catalysis, s 100.0
2c4m_A796 Glycogen phosphorylase; allosteric control, phosph 100.0
3vue_A536 GBSS-I, granule-bound starch synthase 1, chloropla 99.35
3nb0_A725 Glycogen [starch] synthase isoform 2; glycogen syn 97.65
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 97.31
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 96.3
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 95.98
1uqt_A482 Alpha, alpha-trehalose-phosphate synthase; glycosy 95.75
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 95.6
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 95.6
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 95.29
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 95.26
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 94.37
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 94.31
3s28_A816 Sucrose synthase 1; glycosyltransferase, sucrose m 93.48
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 93.12
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 92.73
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 92.73
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 92.24
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 89.29
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 88.9
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Back     alignment and structure
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 799
d1ygpa_876 c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeas 0.0
d2gj4a1824 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit 0.0
d1l5wa_796 c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {E 0.0
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 824 Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Length = 796 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query799
d1ygpa_876 Glycogen phosphorylase {Baker's yeast (Saccharomyc 100.0
d2gj4a1824 Glycogen phosphorylase {Rabbit (Oryctolagus cunicu 100.0
d1l5wa_796 Maltodextrin phosphorylase (MALP) {Escherichia col 100.0
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 98.73
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 97.8
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 96.26
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 96.25
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 93.13
d1uqta_456 Trehalose-6-phosphate synthase, OtsA {Escherichia 89.37
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure