Citrus Sinensis ID: 003754

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------80
MAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQM
ccccccccccccccccccHHHHHHcccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccHHHHHHHHHHccccHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcccccHHHccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccccEEEcccEEEEEEEEEccccccccccccccEEEEEcccccccccccccEEEEccccccccHHHHHHHcccccEEEEEccHHHHHHHHHcccccEEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccccccHHHHcHHHHHHcccccccccccEEEcHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccHHHHHHHHHcccccccccEEEEEEEcccccccEEEEEcccccccccEEEEEEcccccccccccccccccEEEEccccccccccccccccccccccccEEEEEccccccEEEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEccEEEEEEccccc
cccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccEEcccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccEEEEEEEEEccccccccccccccEEEEEEcccccccccccEEEEEccccccHHHHEEEEEccccEEEEEEccHHHHHHHHHHcccEEEEEEccccEEEEEcccHHHccccccccccccccEEEEccccccEEEEHHHcccHHccccHHHHHHHHHHccccccccccEEEEHHHHHHHHHccccHHHHHHHHHHHcHccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcHccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHEEEEEEEEEcccHcccEEEEEEccccccccEEEEEEEcccHHHHEccccccccEEEEEcccccEEEEEEcccccEEEEEcccEEEEEccccccccccccccccccEEccHccEcccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccEEEEEEcccc
mafvgrggqgdvgqRIRDEILVIQRNngcktgmmEEWHQklhnntspddIIICEALLNYIRCGFKIDAYWQTlnchglskqklasydrpivseprfradAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKghnsvisdsfgSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGlkdlnfshppEIMFFISLLLESLClsvvnnedliyctkdwyrvsesyRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQnkvyrrptiiiasritgeeeipvGVVAVltpdmpdvlshvsirarnnkvcfatcFDQNILRNLRLKEGKAVSIRLKSTNLIISDisssnlslsssalpsiprgitfkrKIFRgkyavsvedftpdmvgakscNIKFLRervpswikiptsvaipfgafETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKmrssgmpwpgdegwnLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIhtknplsgdnsEIYTEIVKGLGetlvgaypgramsfvtkknnlkspivtcypskliglygkpsiifrsdsngedlekyagaglydsvimndpekvvldysrdpmvgdksfqTSVFSKIAETGKIIEslygypqdieGVLKDGLIYVVQARPQM
mafvgrggqgdvgqriRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSkqklasydrpivseprfradakesLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGtargrakdLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSqtyqkkfqpsvKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELitlqnkvyrrPTIIiasritgeeeiPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDisssnlslsssalpsiprgitfkrkiFRGKYAvsvedftpdmvgAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTknplsgdnSEIYTEIVKGLGETLVGAYPGRAMSFvtkknnlkspiVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQM
MAFvgrggqgdvgqrirdEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFIsllleslclsVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKstnliisdisssnlslsssalpsiPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQM
*************QRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVS**********SLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDI*************SIPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQ*****
********QGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVS*******AQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNL*********************************KYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGM**PGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSII*************************DPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQ*
***********VGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQM
**********DVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISS**************RGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARP**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGITFKRKIFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query798 2.2.26 [Sep-21-2011]
Q9STV01278 Alpha-glucan water dikina yes no 0.996 0.622 0.679 0.0
Q8LPT91475 Alpha-glucan water dikina N/A no 1.0 0.541 0.584 0.0
Q9AWA51464 Alpha-glucan water dikina N/A no 0.998 0.544 0.576 0.0
Q9SAC61399 Alpha-glucan water dikina no no 1.0 0.570 0.573 0.0
Q6ZY511196 Phosphoglucan, water diki no no 0.919 0.613 0.245 2e-40
Q2QTC21206 Phosphoglucan, water diki no no 0.904 0.598 0.238 3e-39
O57830 821 Probable phosphoenolpyruv yes no 0.206 0.200 0.259 2e-09
O29548 753 Probable phosphoenolpyruv yes no 0.329 0.349 0.231 2e-09
Q9V2H7 819 Probable phosphoenolpyruv yes no 0.206 0.201 0.254 4e-09
O27190 684 Probable phosphoenolpyruv yes no 0.203 0.236 0.258 4e-09
>sp|Q9STV0|GWD2_ARATH Alpha-glucan water dikinase 2 OS=Arabidopsis thaliana GN=GWD2 PE=2 SV=3 Back     alignment and function desciption
 Score = 1134 bits (2932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/802 (67%), Positives = 659/802 (82%), Gaps = 7/802 (0%)

Query: 1    MAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYI 60
            MA VGRGGQGDVGQRIRDEILVIQRNN CK+GMMEEWHQKLHNN+S DD+IICEALLNY+
Sbjct: 480  MALVGRGGQGDVGQRIRDEILVIQRNNHCKSGMMEEWHQKLHNNSSADDVIICEALLNYV 539

Query: 61   RCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHS 120
            R  F+IDAYWQTL  +GL+K++LASYDRPIVSEPRFR+D+KE L RDLTMYLKTLKAVHS
Sbjct: 540  RSDFRIDAYWQTLQTNGLTKERLASYDRPIVSEPRFRSDSKEGLIRDLTMYLKTLKAVHS 599

Query: 121  GADLESAIETCY---KGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSR 177
            GADLESAI+T     KGH+     +   LS KL++ L  +K  + +E+   L+EKLVD+R
Sbjct: 600  GADLESAIDTFLSPSKGHHVF---AVNGLSPKLQDLLNLVKRLVREENTEPLIEKLVDAR 656

Query: 178  IELHPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCL 237
            I+LHP L   R RAKDLLFLDI+L S  KTT+E+ L  LNF++PPEI++ I ++LE+LCL
Sbjct: 657  IQLHPALRAPRTRAKDLLFLDIALESCFKTTIEKRLISLNFNNPPEIIYVICVVLENLCL 716

Query: 238  SVVNNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVK 297
            S+VNNE++I+CTKDWYRVSE+YR +D QWALQ KA+LDRLQLVLA+R Q Y    QP+ K
Sbjct: 717  SIVNNEEIIFCTKDWYRVSEAYRPHDVQWALQTKAVLDRLQLVLADRCQHYFTIIQPTAK 776

Query: 298  YLGCLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGF 357
            YLG LL V+K+ ID FTEE++RA   AVLS L+NRF+P LRK+ANLGCWQVIS  +  GF
Sbjct: 777  YLGQLLRVDKHGIDVFTEEVIRAGPGAVLSTLVNRFDPSLRKIANLGCWQVISSADAYGF 836

Query: 358  ITSVNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKV 417
            +  VNELI +QNK Y +PT+IIAS++TGEEEIP GVVAVLTP M DVLSHVSIRARN+K+
Sbjct: 837  VVCVNELIVVQNKFYSKPTVIIASKVTGEEEIPAGVVAVLTPSMIDVLSHVSIRARNSKI 896

Query: 418  CFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGITFKRK 477
            CFATCFDQN+L NL+ KEG+A+SI  KST L+ISD ++S++S+    + S+PRG+  K K
Sbjct: 897  CFATCFDQNVLSNLKSKEGRAISIHTKSTGLVISDGNNSDVSVRHIFISSVPRGVISKGK 956

Query: 478  IFRGKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKD 537
             F G Y +S ++FT + VG+KS NIKFLRERVPSWIKIPTS A+PFG FE +LS++ NKD
Sbjct: 957  KFCGHYVISSKEFTDERVGSKSYNIKFLRERVPSWIKIPTSAALPFGTFENILSDDSNKD 1016

Query: 538  IANKISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDE-GWNL 596
            +A +IS L   +N GDL+KL+ IQEA+LQMSAP++L  EL  K+RS  MP+ GDE GWN 
Sbjct: 1017 VARRISVLKDSLNRGDLTKLKSIQEAILQMSAPMALRNELITKLRSERMPYLGDESGWNR 1076

Query: 597  AWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNS 656
            +W +IKKVWASKWNERA++SC+K  L+HD +CMAVLIQE ICGDYAFVIHT NP+SGD+S
Sbjct: 1077 SWVAIKKVWASKWNERAYVSCKKNKLDHDAVCMAVLIQEVICGDYAFVIHTNNPVSGDSS 1136

Query: 657  EIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSN 716
            EIYTEIVKGLGETLVGAYPGRAMSF+TKK NLKSP V  YPSK IGLY KPSIIFRSDSN
Sbjct: 1137 EIYTEIVKGLGETLVGAYPGRAMSFITKKTNLKSPTVISYPSKRIGLYSKPSIIFRSDSN 1196

Query: 717  GEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGY 776
             EDLE  AGAGLYDSVIM++ E+VV+DYSR+P++ DKSF+  +FS IAE G +IES+YG 
Sbjct: 1197 NEDLEGNAGAGLYDSVIMDEAEEVVVDYSREPLIMDKSFRVRLFSAIAEAGNVIESIYGC 1256

Query: 777  PQDIEGVLKDGLIYVVQARPQM 798
            PQDIEGV+K G IY+VQARPQ+
Sbjct: 1257 PQDIEGVVKGGHIYIVQARPQV 1278
Mediates the incorporation of phosphate into alpha-glucan, mostly at the C-6 position of glucose units.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 9EC: .EC: 4
>sp|Q8LPT9|GWD1_CITRE Alpha-glucan water dikinase, chloroplastic OS=Citrus reticulata GN=R1 PE=2 SV=1 Back     alignment and function description
>sp|Q9AWA5|GWD1_SOLTU Alpha-glucan water dikinase, chloroplastic OS=Solanum tuberosum GN=R1 PE=1 SV=2 Back     alignment and function description
>sp|Q9SAC6|GWD1_ARATH Alpha-glucan water dikinase 1, chloroplastic OS=Arabidopsis thaliana GN=GWD1 PE=1 SV=2 Back     alignment and function description
>sp|Q6ZY51|PWD_ARATH Phosphoglucan, water dikinase, chloroplastic OS=Arabidopsis thaliana GN=GWD3 PE=1 SV=1 Back     alignment and function description
>sp|Q2QTC2|PWD_ORYSJ Phosphoglucan, water dikinase, chloroplastic OS=Oryza sativa subsp. japonica GN=GWD3 PE=3 SV=2 Back     alignment and function description
>sp|O57830|PPSA_PYRHO Probable phosphoenolpyruvate synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ppsA PE=3 SV=1 Back     alignment and function description
>sp|O29548|PPSA_ARCFU Probable phosphoenolpyruvate synthase OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=ppsA PE=3 SV=1 Back     alignment and function description
>sp|Q9V2H7|PPSA_PYRAB Probable phosphoenolpyruvate synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ppsA PE=3 SV=1 Back     alignment and function description
>sp|O27190|PPSA_METTH Probable phosphoenolpyruvate synthase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=ppsA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query798
255572858 1228 alpha-glucan water dikinase, chloroplast 0.976 0.634 0.729 0.0
28393438 1278 unknown protein [Arabidopsis thaliana] 0.996 0.622 0.680 0.0
79485345 1278 phosphoglucan, water dikinase [Arabidops 0.996 0.622 0.679 0.0
5051787 1288 putative protein [Arabidopsis thaliana] 0.996 0.617 0.674 0.0
297803668 1291 ATGWD2/GWD3 [Arabidopsis lyrata subsp. l 0.996 0.615 0.664 0.0
224110912 1477 predicted protein [Populus trichocarpa] 0.998 0.539 0.583 0.0
57012985 1475 RecName: Full=Alpha-glucan water dikinas 1.0 0.541 0.584 0.0
356567660 1459 PREDICTED: alpha-glucan water dikinase, 0.993 0.543 0.580 0.0
302801007 1309 hypothetical protein SELMODRAFT_233951 [ 1.0 0.609 0.576 0.0
356526777 1459 PREDICTED: alpha-glucan water dikinase, 1.0 0.546 0.580 0.0
>gi|255572858|ref|XP_002527361.1| alpha-glucan water dikinase, chloroplast precursor, putative [Ricinus communis] gi|223533280|gb|EEF35033.1| alpha-glucan water dikinase, chloroplast precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1183 bits (3060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/801 (72%), Positives = 671/801 (83%), Gaps = 22/801 (2%)

Query: 1    MAFVGRGGQGDVGQRIRDEILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYI 60
            M  VGRGGQGDVGQRIRDEILVIQRNN CKTGMMEEWHQKLHNN+SPDD+IICEALLNYI
Sbjct: 447  MLCVGRGGQGDVGQRIRDEILVIQRNNDCKTGMMEEWHQKLHNNSSPDDVIICEALLNYI 506

Query: 61   RCGFKIDAYWQTLNCHGLSKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHS 120
            RCGF+ DAYWQTLN +GL+K+ LASYDRPIVSEP F   AKE LTRDLT+YL+TLKAVHS
Sbjct: 507  RCGFRADAYWQTLNANGLTKEMLASYDRPIVSEPHFNTAAKEGLTRDLTLYLRTLKAVHS 566

Query: 121  GADLESAIETCYKGHNSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIEL 180
            GADLESAIETC        S  F     KL+E + +   +          +KL++SRIEL
Sbjct: 567  GADLESAIETCLGP-----SSKF-----KLKEIILYDLIY---------FQKLLESRIEL 607

Query: 181  HPVLGTARGRAKDLLFLDISLASAIKTTMERGLKDLNFSHPPEIMFFISLLLESLCLSVV 240
              VL T+  RAKDLLF D++L SAI+T ME  LK L+F    +IMF+ISL+LE+LCL+ V
Sbjct: 608  RLVLLTSSERAKDLLFFDVALDSAIRTIMESRLKHLSFDRLQDIMFYISLVLENLCLTTV 667

Query: 241  NNEDLIYCTKDWYRVSESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLG 300
            NNEDLI C KDWYRV ESY+ ND QWALQ KA+LDRLQL+LA+RS  YQKK QPS +YLG
Sbjct: 668  NNEDLICCIKDWYRVRESYKANDVQWALQTKAVLDRLQLILADRSLNYQKKIQPSAQYLG 727

Query: 301  CLLGVEKYVIDNFTEELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITS 360
             LLG+ K VID FTEEL+RA S  +LS L+NRF+PVLRKVA+LGCWQVISPVEVCGF+T 
Sbjct: 728  KLLGIGKSVIDMFTEELIRAGSATILSTLVNRFDPVLRKVASLGCWQVISPVEVCGFVTC 787

Query: 361  VNELITLQNKVYRRPTIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFA 420
            VNELIT+QN+VYR+PT+IIA+R++GEEEIP GVVAVLTPDMPD+LSHVSIRARN+KVCFA
Sbjct: 788  VNELITIQNRVYRKPTVIIANRVSGEEEIPEGVVAVLTPDMPDILSHVSIRARNSKVCFA 847

Query: 421  TCFDQNILRNLRLKEGKAVSIRLKSTNLIISDISSSNLSLSSSALPSIPRGITFKRKIFR 480
            TCFDQNIL+NL+LKEGKA+SI LKS NLIISDIS SNLSL+SS   SI R +TFKRK F 
Sbjct: 848  TCFDQNILKNLKLKEGKAISISLKSMNLIISDISGSNLSLNSSICTSIARPVTFKRKTFY 907

Query: 481  GKYAVSVEDFTPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIAN 540
            GKYA+SVE+FT +MVGAKSCNIKFLR++VPSWIKIP SVA+PFG FE VLSENINKD+AN
Sbjct: 908  GKYAISVEEFTAEMVGAKSCNIKFLRKKVPSWIKIPISVALPFGTFEAVLSENINKDLAN 967

Query: 541  KISRLYKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEG---WNLA 597
            KIS  YK +  GD +KLQ IQ A+ QMSAPLSL  ELK+KMRSS +PWPGDE    WN A
Sbjct: 968  KISGFYKSVLSGDFTKLQAIQGAIQQMSAPLSLTCELKSKMRSSRLPWPGDESEERWNHA 1027

Query: 598  WRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSE 657
            W++IKKVWASKWNER  +SCRKANLNHDNL MAVLIQE ICGDYAFVIHTKNPL+GD SE
Sbjct: 1028 WKAIKKVWASKWNERVHVSCRKANLNHDNLRMAVLIQEVICGDYAFVIHTKNPLTGDASE 1087

Query: 658  IYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNG 717
            IY EIVKGLGETLVGAYPGRAMSF+TKK+N+  PIV  YPSK IGLY K S+IFRSDSNG
Sbjct: 1088 IYIEIVKGLGETLVGAYPGRAMSFITKKSNINFPIVISYPSKNIGLYSKKSLIFRSDSNG 1147

Query: 718  EDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYP 777
            ED+E +AGAGLYDSV+M++ E+VVL+YSRD M+ DK+FQ S+FSKIAE G+++E LYG P
Sbjct: 1148 EDVEAFAGAGLYDSVLMDEEERVVLNYSRDRMIVDKAFQVSLFSKIAEAGRVMEGLYGCP 1207

Query: 778  QDIEGVLKDGLIYVVQARPQM 798
            QDIEGV+KDG IY+VQARPQ+
Sbjct: 1208 QDIEGVVKDGAIYIVQARPQV 1228

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|28393438|gb|AAO42141.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|79485345|ref|NP_194176.3| phosphoglucan, water dikinase [Arabidopsis thaliana] gi|332278206|sp|Q9STV0.3|GWD2_ARATH RecName: Full=Alpha-glucan water dikinase 2; Flags: Precursor gi|332659506|gb|AEE84906.1| phosphoglucan, water dikinase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|5051787|emb|CAB45080.1| putative protein [Arabidopsis thaliana] gi|7269295|emb|CAB79355.1| putative protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297803668|ref|XP_002869718.1| ATGWD2/GWD3 [Arabidopsis lyrata subsp. lyrata] gi|297315554|gb|EFH45977.1| ATGWD2/GWD3 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224110912|ref|XP_002315679.1| predicted protein [Populus trichocarpa] gi|222864719|gb|EEF01850.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|57012985|sp|Q8LPT9.1|GWD1_CITRE RecName: Full=Alpha-glucan water dikinase, chloroplastic; AltName: Full=Starch-related protein R1; Flags: Precursor gi|20384925|gb|AAM18228.1| R1 [Citrus reticulata] Back     alignment and taxonomy information
>gi|356567660|ref|XP_003552035.1| PREDICTED: alpha-glucan water dikinase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|302801007|ref|XP_002982260.1| hypothetical protein SELMODRAFT_233951 [Selaginella moellendorffii] gi|300149852|gb|EFJ16505.1| hypothetical protein SELMODRAFT_233951 [Selaginella moellendorffii] Back     alignment and taxonomy information
>gi|356526777|ref|XP_003531993.1| PREDICTED: alpha-glucan water dikinase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query798
TAIR|locus:21360271278 PWD "phosphoglucan, water diki 0.973 0.607 0.654 3.3e-276
TAIR|locus:20199531399 SEX1 "STARCH EXCESS 1" [Arabid 0.977 0.557 0.551 3.1e-234
TAIR|locus:21510891196 PWD "PHOSPHOGLUCAN WATER DIKIN 0.250 0.167 0.280 1.2e-34
TIGR_CMR|BA_3116 868 BA_3116 "phosphoenolpyruvate s 0.135 0.124 0.205 7.3e-05
TIGR_CMR|DET_0554 758 DET_0554 "phosphoenolpyruvate 0.100 0.105 0.312 8.1e-05
TAIR|locus:2136027 PWD "phosphoglucan, water dikinase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2655 (939.7 bits), Expect = 3.3e-276, P = 3.3e-276
 Identities = 513/784 (65%), Positives = 616/784 (78%)

Query:    19 EILVIQRNNGCKTGMMEEWHQKLHNNTSPDDIIICEALLNYIRCGFKIDAYWQTLNCHGL 78
             EILVIQRNN CK+GMMEEWHQKLHNN+S DD+IICEALLNY+R  F+IDAYWQTL  +GL
Sbjct:   498 EILVIQRNNHCKSGMMEEWHQKLHNNSSADDVIICEALLNYVRSDFRIDAYWQTLQTNGL 557

Query:    79 SKQKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAVHSGADLESAIETCY---KGH 135
             +K++LASYDRPIVSEPRFR+D+KE L RDLTMYLKTLKAVHSGADLESAI+T     KGH
Sbjct:   558 TKERLASYDRPIVSEPRFRSDSKEGLIRDLTMYLKTLKAVHSGADLESAIDTFLSPSKGH 617

Query:   136 NSVISDSFGSLSSKLRECLTFIKAHIHDESINQLMEKLVDSRIELHPVLGTARGRAKDLL 195
             +     +   LS KL++ L  +K  + +E+   L+EKLVD+RI+LHP L   R RAKDLL
Sbjct:   618 HVF---AVNGLSPKLQDLLNLVKRLVREENTEPLIEKLVDARIQLHPALRAPRTRAKDLL 674

Query:   196 FLDISLASAIKTTMERGLKDLNFSHPPEIMFFIXXXXXXXXXXVVNNEDLIYCTKDWYRV 255
             FLDI+L S  KTT+E+ L  LNF++PPEI++ I          +VNNE++I+CTKDWYRV
Sbjct:   675 FLDIALESCFKTTIEKRLISLNFNNPPEIIYVICVVLENLCLSIVNNEEIIFCTKDWYRV 734

Query:   256 SESYRTNDAQWALQAKAILDRLQLVLAERSQTYQKKFQPSVKYLGCLLGVEKYVIDNFTE 315
             SE+YR +D QWALQ KA+LDRLQLVLA+R Q Y    QP+ KYLG LL V+K+ ID FTE
Sbjct:   735 SEAYRPHDVQWALQTKAVLDRLQLVLADRCQHYFTIIQPTAKYLGQLLRVDKHGIDVFTE 794

Query:   316 ELVRAQSEAVLSILINRFEPVLRKVANLGCWQVISPVEVCGFITSVNELITLQNKVYRRP 375
             E++RA   AVLS L+NRF+P LRK+ANLGCWQVIS  +  GF+  VNELI +QNK Y +P
Sbjct:   795 EVIRAGPGAVLSTLVNRFDPSLRKIANLGCWQVISSADAYGFVVCVNELIVVQNKFYSKP 854

Query:   376 TIIIASRITGEEEIPVGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKE 435
             T+IIAS++TGEEEIP GVVAVLTP M DVLSHVSIRARN+K+CFATCFDQN+L NL+ KE
Sbjct:   855 TVIIASKVTGEEEIPAGVVAVLTPSMIDVLSHVSIRARNSKICFATCFDQNVLSNLKSKE 914

Query:   436 GKAVSIRLKXXXXXXXXXXXXXXXXXXXXXXXXPRGITFKRKIFRGKYAVSVEDFTPDMV 495
             G+A+SI  K                        PRG+  K K F G Y +S ++FT + V
Sbjct:   915 GRAISIHTKSTGLVISDGNNSDVSVRHIFISSVPRGVISKGKKFCGHYVISSKEFTDERV 974

Query:   496 GAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLS 555
             G+KS NIKFLRERVPSWIKIPTS A+PFG FE +LS++ NKD+A +IS L   +N GDL+
Sbjct:   975 GSKSYNIKFLRERVPSWIKIPTSAALPFGTFENILSDDSNKDVARRISVLKDSLNRGDLT 1034

Query:   556 KLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDE-GWNLAWRSIKKVWASKWNERAF 614
             KL+ IQEA+LQMSAP++L  EL  K+RS  MP+ GDE GWN +W +IKKVWASKWNERA+
Sbjct:  1035 KLKSIQEAILQMSAPMALRNELITKLRSERMPYLGDESGWNRSWVAIKKVWASKWNERAY 1094

Query:   615 ISCRKANLNHDNLCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAY 674
             +SC+K  L+HD +CMAVLIQE ICGDYAFVIHT NP+SGD+SEIYTEIVKGLGETLVGAY
Sbjct:  1095 VSCKKNKLDHDAVCMAVLIQEVICGDYAFVIHTNNPVSGDSSEIYTEIVKGLGETLVGAY 1154

Query:   675 PGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIM 734
             PGRAMSF+TKK NLKSP V  YPSK IGLY KPSIIFRSDSN EDLE  AGAGLYDSVIM
Sbjct:  1155 PGRAMSFITKKTNLKSPTVISYPSKRIGLYSKPSIIFRSDSNNEDLEGNAGAGLYDSVIM 1214

Query:   735 NDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQA 794
             ++ E+VV+DYSR+P++ DKSF+  +FS IAE G +IES+YG PQDIEGV+K G IY+VQA
Sbjct:  1215 DEAEEVVVDYSREPLIMDKSFRVRLFSAIAEAGNVIESIYGCPQDIEGVVKGGHIYIVQA 1274

Query:   795 RPQM 798
             RPQ+
Sbjct:  1275 RPQV 1278
GO:0005524 "ATP binding" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016301 "kinase activity" evidence=IEA
GO:0016310 "phosphorylation" evidence=IEA
GO:0009941 "chloroplast envelope" evidence=IDA
TAIR|locus:2019953 SEX1 "STARCH EXCESS 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151089 PWD "PHOSPHOGLUCAN WATER DIKINASE" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|BA_3116 BA_3116 "phosphoenolpyruvate synthase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|DET_0554 DET_0554 "phosphoenolpyruvate synthase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9STV0GWD2_ARATH2, ., 7, ., 9, ., 40.67950.99620.6220yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.9.40.914
3rd Layer2.7.90.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
PWD
PWD (PHOSPHOGLUCAN, WATER DIKINASE); ATP binding / kinase; PHOSPHOGLUCAN, WATER DIKINASE (PWD); FUNCTIONS IN- kinase activity, ATP binding; INVOLVED IN- phosphorylation; LOCATED IN- chloroplast envelope; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Pyruvate phosphate dikinase, PEP/pyruvate-binding (InterPro-IPR002192); BEST Arabidopsis thaliana protein match is- SEX1 (STARCH EXCESS 1); alpha-glucan, water dikinase (TAIR-AT1G10760.1); Has 968 Blast hits to 950 proteins in 384 species- Archae - 116; Bacteria - 652; Metazoa - 0; Fungi [...] (1278 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
SEX4
SEX4 (STARCH-EXCESS 4); polysaccharide binding / protein tyrosine/serine/threonine phosphatase; [...] (379 aa)
      • 0.925
DPE1
DPE1 (DISPROPORTIONATING ENZYME); 4-alpha-glucanotransferase/ catalytic/ cation binding; Encode [...] (576 aa)
      • 0.921
ISA3
ISA3 (ISOAMYLASE 3); alpha-amylase/ isoamylase; Encodes an isoamylase-like protein. Mutant stud [...] (764 aa)
      • 0.919
RCP1
RCP1 (ROOT CAP 1); maltose transmembrane transporter; Encodes a maltose transporter that is exp [...] (415 aa)
      • 0.867
AT3G29320
glucan phosphorylase, putative; Encodes a plastidic alpha-glucan phosphorylase. In vitro, the e [...] (962 aa)
      • 0.829
PHS2
PHS2 (ALPHA-GLUCAN PHOSPHORYLASE 2); phosphorylase/ transferase, transferring glycosyl groups; [...] (841 aa)
      • 0.827
ATLDA
ATLDA (LIMIT DEXTRINASE); alpha-amylase/ limit dextrinase/ pullulanase; Encodes an enzyme thoug [...] (965 aa)
      • 0.823
BAM4
BAM4 (BETA-AMYLASE 4); beta-amylase/ catalytic/ cation binding; In vitro assay indicates no bet [...] (531 aa)
      • 0.819
ADG1
ADG1 (ADP GLUCOSE PYROPHOSPHORYLASE 1); glucose-1-phosphate adenylyltransferase; Encodes the sm [...] (520 aa)
      • 0.790
AMY1
AMY1 (ALPHA-AMYLASE-LIKE); alpha-amylase; Predicted to be secreted protein based on signalP pre [...] (423 aa)
      • 0.790

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query798
pfam01326324 pfam01326, PPDK_N, Pyruvate phosphate dikinase, PE 3e-30
TIGR01418 782 TIGR01418, PEP_synth, phosphoenolpyruvate synthase 7e-15
PRK06464 795 PRK06464, PRK06464, phosphoenolpyruvate synthase; 2e-11
COG0574 740 COG0574, PpsA, Phosphoenolpyruvate synthase/pyruva 2e-10
PRK06241 871 PRK06241, PRK06241, phosphoenolpyruvate synthase; 3e-09
PRK06241 871 PRK06241, PRK06241, phosphoenolpyruvate synthase; 3e-06
>gnl|CDD|216434 pfam01326, PPDK_N, Pyruvate phosphate dikinase, PEP/pyruvate binding domain Back     alignment and domain information 
 Score =  121 bits (306), Expect = 3e-30
 Identities = 78/336 (23%), Positives = 123/336 (36%), Gaps = 67/336 (19%)

Query: 491 TPDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFIN 550
             D+VG K+ N+  L       + +P    I   AF   L EN  ++    + R     +
Sbjct: 3   DVDLVGGKAANLAELARAG---LPVPPGFVITTEAFRRFLEENGLREEILSLLRPLLLSD 59

Query: 551 GGDLSKL-QEIQEAVLQMSAPLSLIYELKNK-----------MRSS-------GMPWPGD 591
              L      I+E +L    P  L+  L              +RSS          + G 
Sbjct: 60  RSSLDAASPGIRELILNAPLPDELVEALAAALDELGADAPVAVRSSATAEDLPEASFAGQ 119

Query: 592 -------EGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGDYAFV 644
                   G      +IK VWAS ++ RA    +   ++ + + MAV++Q  +  D + V
Sbjct: 120 YDTYLNVNGLEQLLDAIKAVWASLFSPRALAYRQARGIDDEEVGMAVVVQPMVDADASGV 179

Query: 645 IHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGR--AMSFVTKKNNLKSPIVTCYPSKLIG 702
             T++P +GD   +  E V GLGE +V    G     +FV  ++                
Sbjct: 180 AFTRDPSTGDRDLVVIEAVWGLGEAVVS---GEVTPDTFVVSRD---------------- 220

Query: 703 LYGKPSIIFRSDSNGEDLEKYAGAGL-YDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFS 761
                ++  R     E      G G     V        VL         D   Q     
Sbjct: 221 ---DGTVRERELGQKEVALVLEGGGTVEVPVPEERRSAPVLT--------DAQLQE---- 265

Query: 762 KIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARPQ 797
            +A+  K +E+ +G PQDIE  +  G +Y++QARP 
Sbjct: 266 -LADLAKRLEAHFGSPQDIEWAIDGGRLYILQARPI 300

This enzyme catalyzes the reversible conversion of ATP to AMP, pyrophosphate and phosphoenolpyruvate (PEP). Length = 324
>gnl|CDD|233405 TIGR01418, PEP_synth, phosphoenolpyruvate synthase Back     alignment and domain information
>gnl|CDD|235809 PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>gnl|CDD|223647 COG0574, PpsA, Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|235751 PRK06241, PRK06241, phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>gnl|CDD|235751 PRK06241, PRK06241, phosphoenolpyruvate synthase; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 798
PRK06464 795 phosphoenolpyruvate synthase; Validated 100.0
PRK06241 871 phosphoenolpyruvate synthase; Validated 100.0
TIGR01418 782 PEP_synth phosphoenolpyruvate synthase. Also calle 100.0
PF01326327 PPDK_N: Pyruvate phosphate dikinase, PEP/pyruvate 100.0
PRK05878 530 pyruvate phosphate dikinase; Provisional 100.0
COG0574 740 PpsA Phosphoenolpyruvate synthase/pyruvate phospha 100.0
TIGR01828 856 pyru_phos_dikin pyruvate, phosphate dikinase. This 100.0
PRK09279 879 pyruvate phosphate dikinase; Provisional 100.0
PRK05849 783 hypothetical protein; Provisional 99.95
PRK05849783 hypothetical protein; Provisional 96.82
PRK06241871 phosphoenolpyruvate synthase; Validated 96.68
PF0039180 PEP-utilizers: PEP-utilising enzyme, mobile domain 96.42
PRK08296603 hypothetical protein; Provisional 96.35
PRK05865854 hypothetical protein; Provisional 94.85
TIGR01418782 PEP_synth phosphoenolpyruvate synthase. Also calle 94.81
PRK06354590 pyruvate kinase; Provisional 94.58
PRK06464795 phosphoenolpyruvate synthase; Validated 94.46
PRK05878530 pyruvate phosphate dikinase; Provisional 94.37
PRK11377473 dihydroxyacetone kinase subunit M; Provisional 94.28
TIGR01828856 pyru_phos_dikin pyruvate, phosphate dikinase. This 93.87
PRK09279879 pyruvate phosphate dikinase; Provisional 93.44
PRK11177575 phosphoenolpyruvate-protein phosphotransferase; Pr 91.87
TIGR01417565 PTS_I_fam phosphoenolpyruvate-protein phosphotrans 91.44
COG3848111 Phosphohistidine swiveling domain [Signal transduc 90.89
PRK11061748 fused phosphoenolpyruvate-protein phosphotransfera 90.11
COG1080574 PtsA Phosphoenolpyruvate-protein kinase (PTS syste 89.28
>PRK06464 phosphoenolpyruvate synthase; Validated Back     alignment and domain information 
Probab=100.00  E-value=9.2e-51  Score=485.10  Aligned_cols=289  Identities=24%  Similarity=0.379  Sum_probs=240.2

Q ss_pred             CCceeEeCCCCC---CCCcCHHhHHHHHHhhhCC-CCccCCCceEeCHHHHHHHHHhccchhHHHHHHHHHhhhCCCChH
Q 003754          480 RGKYAVSVEDFT---PDMVGAKSCNIKFLRERVP-SWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLS  555 (798)
Q Consensus       480 ~~~~vl~l~e~~---~~~vGgKAanL~~L~~~~p-~g~~VP~GfvIpfgafe~fL~~~~~~~l~~~I~~l~~~l~~~d~~  555 (798)
                      ++++++||.++.   ...|||||+||++|++.++ .|+|||+|||||+++|++||+.+   ++.+.|..+.+.++.++..
T Consensus         3 ~~~~i~~l~~~~~~~~~~vGgKaa~L~~L~~~~~~~g~pVP~gfvIt~~af~~fl~~~---~l~~~i~~~l~~~~~~d~~   79 (795)
T PRK06464          3 MMKYVLWFEELGMEDVPLVGGKNASLGEMISNLSGAGVPVPPGFATTAEAYRYFLEQT---GLNEKIYELLDGLDVDDVD   79 (795)
T ss_pred             CCceeeehhHcCcccccccChHHHHHHHHHhhhhccCCCCCCeEEECHHHHHHHHHhC---ChHHHHHHHHhhcCcCCHH
Confidence            456889988875   5679999999999998655 59999999999999999999998   7778887777666666655


Q ss_pred             HH----HHHHHHHHcCCCCHHHHHHHHHHHH--------------hhC-------CCCCCCc-------cHHHHHHHHHH
Q 003754          556 KL----QEIQEAVLQMSAPLSLIYELKNKMR--------------SSG-------MPWPGDE-------GWNLAWRSIKK  603 (798)
Q Consensus       556 ~L----~~Ir~~I~~~~lP~el~~eL~~a~r--------------Ssg-------~s~aG~~-------~~e~l~~AIk~  603 (798)
                      .+    ++||++|++.++|+++.++|..+++              ||+       .||||+|       +.+++++|||+
T Consensus        80 ~l~~~~~~ir~~i~~~~~P~~l~~~l~~a~~~l~~~~g~~~vaVRSSa~~ED~~~~SfAGq~~t~l~v~~~~~l~~AIk~  159 (795)
T PRK06464         80 ALAKAGAQIRQLIIDTPFPPDLEQEIREAYAKLSAGYGEASVAVRSSATAEDLPDASFAGQQETFLNVRGIDDVLEAVKE  159 (795)
T ss_pred             HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhcccCCceEEEECCCcccCCCCCCCCCccceecCCCCHHHHHHHHHH
Confidence            43    7999999999999999999998764              332       3689987       37999999999


Q ss_pred             HHhcCCChHHHHHHHHcCCCCcccceeEEEEeecCCc--eeEEEEecCCCCCCCCcEEEEeecCCccccccccCCCCceE
Q 003754          604 VWASKWNERAFISCRKANLNHDNLCMAVLIQETICGD--YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSF  681 (798)
Q Consensus       604 VWASly~~RAv~yR~~~Gi~~~~~~MAVLVQemV~a~--~SGVlfT~nP~tg~~~~i~Iea~~GLGE~lVsG~~G~p~~f  681 (798)
                      ||||+||+||+.||+++|++++++.|||+||+||+++  +|||+||+||.+++.++++|+++|||||+||+|.+ +||+|
T Consensus       160 v~aS~~~~rA~~YR~~~gi~~~~~~mAVlVQ~Mv~a~~~~SGV~fT~dP~~g~~~~~~I~a~~GlGe~vVsG~v-~pd~~  238 (795)
T PRK06464        160 CFASLFTDRAISYRVHQGFDHFKVALSAGVQKMVRSDLAASGVMFTLDTESGFRDVVFITASWGLGEMVVQGAV-NPDEF  238 (795)
T ss_pred             HHHccCCHHHHHHHHHcCCCchhcceeEEEEEccCCCcCceEEEEecCCCCCCCCeEEEEEccCCCcccccCCc-cCeEE
Confidence            9999999999999999999999999999999999999  99999999999999999999999999999999987 89999


Q ss_pred             EEecCCCC--CCccccccccccccCCCceeEeecCCCCcccccccCCCceeeeecCCccccccccCCCCCcCCcccchHH
Q 003754          682 VTKKNNLK--SPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSV  759 (798)
Q Consensus       682 ~v~k~~~~--~~~vl~~~sk~v~~~~~~~~i~~sds~gedle~~ag~Gl~~svp~~~~~~~~vdy~~~p~L~D~~~r~~~  759 (798)
                      +++|.+..  ...++   ++.++.+   ...+..+..|       +.|+ ..++++++.      ++.|+|+|++     
T Consensus       239 ~v~~~~~~~~~~~i~---~~~i~~K---~~~~~~~~~~-------~~~~-~~~~~~~~~------~~~~~L~~~~-----  293 (795)
T PRK06464        239 YVHKPTLKAGKPAIV---RRTLGSK---KIKMVYDDGG-------EHGV-KTVDVPEEE------RNRFSLTDEE-----  293 (795)
T ss_pred             EEeccccccccccee---eeecccc---ceeeeeccCC-------CCce-eEEeCCHHH------hhccCCCHHH-----
Confidence            99987532  11122   4555553   2222222111       1223 355555433      4679999987     


Q ss_pred             HHHHHHHHHHHHHhcCCCeeEEEEEEC--CEEEEEeeccC
Q 003754          760 FSKIAETGKIIESLYGYPQDIEGVLKD--GLIYVVQARPQ  797 (798)
Q Consensus       760 l~~La~la~~IE~~fG~PQDIEwai~~--g~LyIlQaRP~  797 (798)
                      +++|++++.+||++||+|||||||+++  |+|||||+||+
T Consensus       294 l~~La~l~~~lE~~fg~pqDIEWai~~~~g~l~ILQaRPi  333 (795)
T PRK06464        294 VLELAKQAVIIEKHYGRPMDIEWAKDGDDGKLYIVQARPE  333 (795)
T ss_pred             HHHHHHHHHHHHHHhCCCceeEEEEECCCCcEEEEEeecc
Confidence            899999999999999999999999987  99999999997

>PRK06241 phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>TIGR01418 PEP_synth phosphoenolpyruvate synthase Back     alignment and domain information
>PF01326 PPDK_N: Pyruvate phosphate dikinase, PEP/pyruvate binding domain; InterPro: IPR002192 This enzyme catalyses the reversible conversion of ATP to AMP, pyrophosphate and phosphoenolpyruvate (PEP) [] Back     alignment and domain information
>PRK05878 pyruvate phosphate dikinase; Provisional Back     alignment and domain information
>COG0574 PpsA Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase Back     alignment and domain information
>PRK09279 pyruvate phosphate dikinase; Provisional Back     alignment and domain information
>PRK05849 hypothetical protein; Provisional Back     alignment and domain information
>PRK05849 hypothetical protein; Provisional Back     alignment and domain information
>PRK06241 phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>PF00391 PEP-utilizers: PEP-utilising enzyme, mobile domain; InterPro: IPR008279 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ] Back     alignment and domain information
>PRK08296 hypothetical protein; Provisional Back     alignment and domain information
>PRK05865 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01418 PEP_synth phosphoenolpyruvate synthase Back     alignment and domain information
>PRK06354 pyruvate kinase; Provisional Back     alignment and domain information
>PRK06464 phosphoenolpyruvate synthase; Validated Back     alignment and domain information
>PRK05878 pyruvate phosphate dikinase; Provisional Back     alignment and domain information
>PRK11377 dihydroxyacetone kinase subunit M; Provisional Back     alignment and domain information
>TIGR01828 pyru_phos_dikin pyruvate, phosphate dikinase Back     alignment and domain information
>PRK09279 pyruvate phosphate dikinase; Provisional Back     alignment and domain information
>PRK11177 phosphoenolpyruvate-protein phosphotransferase; Provisional Back     alignment and domain information
>TIGR01417 PTS_I_fam phosphoenolpyruvate-protein phosphotransferase Back     alignment and domain information
>COG3848 Phosphohistidine swiveling domain [Signal transduction mechanisms] Back     alignment and domain information
>PRK11061 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; Provisional Back     alignment and domain information
>COG1080 PtsA Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query798
2ols_A 794 Phosphoenolpyruvate synthase; MC structural genomi 2e-19
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis} Length = 794 Back     alignment and structure
 Score = 92.7 bits (230), Expect = 2e-19
 Identities = 71/349 (20%), Positives = 130/349 (37%), Gaps = 72/349 (20%)

Query: 493 DMVGAKSCNI-KFLRERVPSWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFING 551
           + VG K+ ++ + + +     +++P   A    A+   L+ N    ++ +IS     ++ 
Sbjct: 18  ERVGGKNASLGEMISQLTEKGVRVPGGFATTAEAYRAFLAHN---GLSERISAALAKLDV 74

Query: 552 GDLSKLQE----IQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDEGWNLAWRS------- 600
            D+++L      I++ +L    P  L  E++           G +  ++A RS       
Sbjct: 75  EDVAELARVGKEIRQWILDTPFPEQLDAEIEAAWNKMVADAGGADI-SVAVRSSATAEDL 133

Query: 601 ------------------------IKKVWASKWNERAFISCRKAN-LNHDNLCMAVLIQE 635
                                   +  V+AS +N+RA IS R      HD + ++  +Q 
Sbjct: 134 PDASFAGQQETFLNINGLDNVKEAMHHVFASLYNDRA-ISYRVHKGFEHDIVALSAGVQR 192

Query: 636 TICGDYAF--VIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAM--SFVTKKNNLKSP 691
            +  D     V+ T +  SG +  ++     GLGE +V    G      F   K  LK+ 
Sbjct: 193 MVRSDSGASGVMFTLDTESGYDQVVFVTSSYGLGENVVQ---GAVNPDEFYVFKPTLKA- 248

Query: 692 IVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVG 751
                        GKP+I+ ++  +      +         + N    V  +      + 
Sbjct: 249 -------------GKPAILRKTMGSKHIKMIFTDKAEAGKSVTN--VDVPEEDRNRFSIT 293

Query: 752 DKSFQTSVFSKIAETGKIIESLYGYPQDIEGVL--KDGLIYVVQARPQM 798
           D+         +A     IE  YG P DIE      DG +Y++QARP+ 
Sbjct: 294 DEEITE-----LAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQARPET 337
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query798
2ols_A 794 Phosphoenolpyruvate synthase; MC structural genomi 100.0
1vbg_A 876 Pyruvate,orthophosphate dikinase; transferase, mai 100.0
1kbl_A 873 PPDK, pyruvate phosphate dikinase; transferase, ph 100.0
1h6z_A 913 Pyruvate phosphate dikinase; transferase, tropical 100.0
2x0s_A 913 Pyruvate phosphate dikinase; transferase, tropical 100.0
3t05_A606 Pyruvate kinase, PK; tetramer, glycolysis, transfe 96.11
2e28_A587 Pyruvate kinase, PK; allosteric, transferase; 2.40 95.87
2ols_A794 Phosphoenolpyruvate synthase; MC structural genomi 95.04
1h6z_A913 Pyruvate phosphate dikinase; transferase, tropical 94.36
1vbg_A876 Pyruvate,orthophosphate dikinase; transferase, mai 94.31
1zym_A258 Enzyme I; phosphotransferase; 2.50A {Escherichia c 94.2
1kbl_A873 PPDK, pyruvate phosphate dikinase; transferase, ph 94.06
2wqd_A572 Phosphoenolpyruvate-protein phosphotransferase; ki 91.19
2hwg_A575 Phosphoenolpyruvate-protein phosphotransferase; en 91.12
2x0s_A913 Pyruvate phosphate dikinase; transferase, tropical 89.54
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis} Back     alignment and structure
Probab=100.00  E-value=2.3e-49  Score=473.66  Aligned_cols=291  Identities=23%  Similarity=0.348  Sum_probs=235.8

Q ss_pred             CCceeEeCCCCC---CCCcCHHhHHHHHHhhhCC-CCccCCCceEeCHHHHHHHHHhccchhHHHHHHHHHhhhCCCChH
Q 003754          480 RGKYAVSVEDFT---PDMVGAKSCNIKFLRERVP-SWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLS  555 (798)
Q Consensus       480 ~~~~vl~l~e~~---~~~vGgKAanL~~L~~~~p-~g~~VP~GfvIpfgafe~fL~~~~~~~l~~~I~~l~~~l~~~d~~  555 (798)
                      ++++++||++.+   ...+|||++||++|.+.++ .|+|||+|||||+++|++|++.+   ++++.|....+.++.++..
T Consensus         2 ~~~~v~~~~~~~~~~~~~vGGK~anL~em~~~L~~~GlpVP~GF~Itt~a~~~fl~~~---~l~~~i~~~l~~l~~~~~~   78 (794)
T 2ols_A            2 ADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGGFATTAEAYRAFLAHN---GLSERISAALAKLDVEDVA   78 (794)
T ss_dssp             --CCEEEGGGCCGGGHHHHHHHHHHHHHHHHHHGGGTCCCCCEEEECHHHHHHHHTGG---GHHHHHHHHHHSCCTTSHH
T ss_pred             CCCEEEECCcCChhhcccCCHHHHHHHHHHHHHhhCCCCCCCEEEECHHHHHHHHHhC---ChHHHHHHHHHhhcccCHH
Confidence            467899999886   4689999999999987432 58999999999999999999987   7888888877777766655


Q ss_pred             H----HHHHHHHHHcCCCCHHHHHHHHHHHHh----------------h-------CCCCCCCc-------cHHHHHHHH
Q 003754          556 K----LQEIQEAVLQMSAPLSLIYELKNKMRS----------------S-------GMPWPGDE-------GWNLAWRSI  601 (798)
Q Consensus       556 ~----L~~Ir~~I~~~~lP~el~~eL~~a~rS----------------s-------g~s~aG~~-------~~e~l~~AI  601 (798)
                      .    ..++|++|++.++|+++.++|.++|+.                |       +.+|+|++       +.++++.||
T Consensus        79 ~l~~~~~~ir~~I~~~~~p~~l~~~i~~a~~~l~~~~g~~~~~vaVRSSa~~EDl~~~sfAG~~~t~l~v~g~~~l~~Ai  158 (794)
T 2ols_A           79 ELARVGKEIRQWILDTPFPEQLDAEIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLDNVKEAM  158 (794)
T ss_dssp             HHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTSSCCCCEEEEEEECC-------CCSCSCEEEEECSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccccccCceEEEecCCChhhhhhhhhhhhhhhhhcCCCHHHHHHHH
Confidence            3    378999999999999999999888743                2       13578987       589999999


Q ss_pred             HHHHhcCCChHHHHHHHHcCCCCcccceeEEEEeecCCc--eeEEEEecCCCCCCCCcEEEEeecCCccccccccCCCCc
Q 003754          602 KKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGD--YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAM  679 (798)
Q Consensus       602 k~VWASly~~RAv~yR~~~Gi~~~~~~MAVLVQemV~a~--~SGVlfT~nP~tg~~~~i~Iea~~GLGE~lVsG~~G~p~  679 (798)
                      |+||||+||+||+.||+++|++++++.|||+||+||+++  +|||+||+||.||+.+.++|+++|||||.||+|.+ +|+
T Consensus       159 k~v~aS~~s~RAi~YR~~~gi~~~~~~mAV~VQ~MV~~~~s~sGV~FT~dP~tG~~~~~~I~a~~GlGE~vV~G~~-tpd  237 (794)
T 2ols_A          159 HHVFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVFVTSSYGLGENVVQGAV-NPD  237 (794)
T ss_dssp             HHHHHHTTCHHHHHHHHHHCC--CCCCEEEEEEECCCTTSSEEEEEESSCTTTCCCSEEEEEEEESCTHHHHHTSS-CCE
T ss_pred             HHHHHhcCCHHHHHHHHHcCCChHHhCceEEEEEcccCCceeEEEEEeCCCCCCCCceEEEEeccCCCceeecCCc-CCc
Confidence            999999999999999999999999999999999999999  99999999999999999999999999999999998 899


Q ss_pred             eEEEecCCC--CCCccccccccccccCCCceeEeecCCCCcccccccCCCceeeeecCCccccccccCCCCCcCCcccch
Q 003754          680 SFVTKKNNL--KSPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQT  757 (798)
Q Consensus       680 ~f~v~k~~~--~~~~vl~~~sk~v~~~~~~~~i~~sds~gedle~~ag~Gl~~svp~~~~~~~~vdy~~~p~L~D~~~r~  757 (798)
                      .|.++|.+.  ....+.   .+.++.+ ...+++..  +++      .+|.++.++++++.      ++.++|+|++   
T Consensus       238 ~~~v~kp~l~~~~~~i~---~~~~~~k-~~~~~~~~--~~~------~g~~~~~~~~p~~~------~~~~~L~d~~---  296 (794)
T 2ols_A          238 EFYVFKPTLKAGKPAIL---RKTMGSK-HIKMIFTD--KAE------AGKSVTNVDVPEED------RNRFSITDEE---  296 (794)
T ss_dssp             EEEEEHHHHHTTSCCEE---EEECCCC-CEEEEECS--CCS------SSTTEEEEECCHHH------HTSCSSCHHH---
T ss_pred             EEEEeccccccCCccee---eeecccc-ceeEEecc--ccc------CCCeeEEEeCCHHH------hcCCCCCHHH---
Confidence            999998321  001232   3444443 22333321  110      12324566776543      3679999987   


Q ss_pred             HHHHHHHHHHHHHHHhcCCCeeEEEEEECC--EEEEEeeccC
Q 003754          758 SVFSKIAETGKIIESLYGYPQDIEGVLKDG--LIYVVQARPQ  797 (798)
Q Consensus       758 ~~l~~La~la~~IE~~fG~PQDIEwai~~g--~LyIlQaRP~  797 (798)
                        +.+|++++..||++||.||||||+++++  +|||||+||+
T Consensus       297 --~~~L~~~~~~lE~~yg~pqDIEwai~~~~g~L~iLQaRP~  336 (794)
T 2ols_A          297 --ITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQARPE  336 (794)
T ss_dssp             --HHHHHHHHHHHHHHHTSCEEEEEEECTTTCCEEEEEEEEC
T ss_pred             --HHHHHHHHHHHHHHcCCCeEEEEEEECCCCeEEEEEecCc
Confidence              7899999999999999999999999976  9999999996
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A* Back     alignment and structure
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A Back     alignment and structure
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A Back     alignment and structure
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei} Back     alignment and structure
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A* Back     alignment and structure
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus} Back     alignment and structure
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis} Back     alignment and structure
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A Back     alignment and structure
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A* Back     alignment and structure
>1zym_A Enzyme I; phosphotransferase; 2.50A {Escherichia coli} SCOP: a.60.10.1 c.8.1.2 PDB: 1eza_A 1ezb_A 1ezc_A 1ezd_A 2eza_A 2ezb_A 2ezc_A 3ezb_A 3eze_A 3eza_A Back     alignment and structure
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A Back     alignment and structure
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A Back     alignment and structure
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A Back     alignment and structure
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 798
d1kbla3375 d.142.1.5 (A:2-376) Pyruvate phosphate dikinase, N 7e-12
d1h6za3405 d.142.1.5 (A:1-405) Pyruvate phosphate dikinase, N 4e-10
d1vbga3380 d.142.1.5 (A:3-382) Pyruvate phosphate dikinase, N 1e-06
>d1kbla3 d.142.1.5 (A:2-376) Pyruvate phosphate dikinase, N-terminal domain {Clostridium symbiosum [TaxId: 1512]} Length = 375 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: ATP-grasp
superfamily: Glutathione synthetase ATP-binding domain-like
family: Pyruvate phosphate dikinase, N-terminal domain
domain: Pyruvate phosphate dikinase, N-terminal domain
species: Clostridium symbiosum [TaxId: 1512]

 Score = 65.4 bits (158), Expect = 7e-12
 Identities = 39/339 (11%), Positives = 96/339 (28%), Gaps = 27/339 (7%)

Query: 482 KYAVSVEDFTPDM---VGAKSCNIKFLRE---RVPSWIKIPTSVAIPFGAFETVLSENIN 535
           K+    E+    M   +G K CN+  +      +P    + T     +      +++ I 
Sbjct: 2   KWVYKFEEGNASMRNLLGGKGCNLAEMTILGMPIPQGFTVTTEACTEYYNSGKQITQEIQ 61

Query: 536 KDIANKISRL---YKFINGGDLSKLQEIQEAVLQMSAPLSLIYELKNKMRSSGMPWPGDE 592
             I   I+ L        G     L     +  + S P  +   L   +    +     +
Sbjct: 62  DQIFEAITWLEELNGKKFGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKK 121

Query: 593 GWNLAWRS-------------IKKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICG 639
             N  +               + +V  S + +       +  ++ D    A  ++E    
Sbjct: 122 TGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAMKEEKGVHFDTDLTADDLKELAEK 181

Query: 640 DYAFV--IHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYP 697
             A             +  +     VK +  +                 +  + +     
Sbjct: 182 FKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGDWGTAVNVQTM 241

Query: 698 SKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQT 757
                     + +  + +     +   G  L +       + V    +  P+   ++   
Sbjct: 242 VFGNKGETSGTGVAFTRNPSTGEKGIYGEYLIN---AQGEDVVAGVRTPQPITQLENDMP 298

Query: 758 SVFSKIAETGKIIESLYGYPQDIEGVLKDGLIYVVQARP 796
             + +  +    +E  +   QD+E  +++G +Y +Q R 
Sbjct: 299 DCYKQFMDLAMKLEKHFRDMQDMEFTIEEGKLYFLQTRN 337
>d1h6za3 d.142.1.5 (A:1-405) Pyruvate phosphate dikinase, N-terminal domain {Trypanosoma brucei [TaxId: 5691]} Length = 405 Back     information, alignment and structure
>d1vbga3 d.142.1.5 (A:3-382) Pyruvate phosphate dikinase, N-terminal domain {Maize (Zea mays) [TaxId: 4577]} Length = 380 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query798
d1h6za3405 Pyruvate phosphate dikinase, N-terminal domain {Tr 100.0
d1vbga3380 Pyruvate phosphate dikinase, N-terminal domain {Ma 99.97
d1kbla3375 Pyruvate phosphate dikinase, N-terminal domain {Cl 99.97
d1zyma2124 N-terminal domain of enzyme I of the PEP:sugar pho 97.83
d1h6za2132 Pyruvate phosphate dikinase, central domain {Trypa 96.06
d1vbga2135 Pyruvate phosphate dikinase, central domain {Maize 95.9
d1kbla2133 Pyruvate phosphate dikinase, central domain {Clost 95.36
d2hi6a1132 Hypothetical protein AF0055 {Archaeoglobus fulgidu 94.46
>d1h6za3 d.142.1.5 (A:1-405) Pyruvate phosphate dikinase, N-terminal domain {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: ATP-grasp
superfamily: Glutathione synthetase ATP-binding domain-like
family: Pyruvate phosphate dikinase, N-terminal domain
domain: Pyruvate phosphate dikinase, N-terminal domain
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=1.3e-36  Score=334.97  Aligned_cols=268  Identities=18%  Similarity=0.200  Sum_probs=177.7

Q ss_pred             CceeEeCC----CCC---CCCcCHHhHHHHHHhhhCCCCccCCCceEeCHHHHHHHHHhcc-chhHHHHHHHHHhhhC--
Q 003754          481 GKYAVSVE----DFT---PDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENI-NKDIANKISRLYKFIN--  550 (798)
Q Consensus       481 ~~~vl~l~----e~~---~~~vGgKAanL~~L~~~~p~g~~VP~GfvIpfgafe~fL~~~~-~~~l~~~I~~l~~~l~--  550 (798)
                      .+|++++.    +.+   .++||||++||++|.+   .|||||+|||||+.+|++||+.+. ++.++..|......++  
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~lVGGK~AnLgel~~---~GipVP~GFvITt~Ay~~Fl~~n~L~~~i~~~i~~~l~~~~~~   79 (405)
T d1h6za3           3 KKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEKE   79 (405)
T ss_dssp             CCCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHTTTTTSSCCCHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEcCCCcccCCcchHhhccHHHHHHHHHHH---CcCCCCCCEEehHHHHHHHHHcCCCcHHHHHHHHHHHHhhhHH
Confidence            46888885    544   3579999999999988   699999999999999999999873 2344444433211110  


Q ss_pred             ----CCCh-------------HHH-------------H-HHHHHHHcCCCCHHHHHHHHHHHHh------hCCC------
Q 003754          551 ----GGDL-------------SKL-------------Q-EIQEAVLQMSAPLSLIYELKNKMRS------SGMP------  587 (798)
Q Consensus       551 ----~~d~-------------~~L-------------~-~Ir~~I~~~~lP~el~~eL~~a~rS------sg~s------  587 (798)
                          .++.             ...             . ..+.+.....-++.........+..      .+.+      
T Consensus        80 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  159 (405)
T d1h6za3          80 MGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEE  159 (405)
T ss_dssp             HCCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHHHHHCCCSTTTST
T ss_pred             hhhhhccccchhhhhcccccchhhhhhhhhhhhhhhhhhhHHHHHHhcccchhhHHHHHHHHHHhhcccccccchhHHHH
Confidence                0000             000             1 1122222222222222221111100      0000      


Q ss_pred             -----------------------------------CCCCc----cHHHHHHHHHHHHhcCCChHHHHHHHHcCCCCcc--
Q 003754          588 -----------------------------------WPGDE----GWNLAWRSIKKVWASKWNERAFISCRKANLNHDN--  626 (798)
Q Consensus       588 -----------------------------------~aG~~----~~e~l~~AIk~VWASly~~RAv~yR~~~Gi~~~~--  626 (798)
                                                         ..|.+    +.+++..+|+.||+|+|++||..||...+++++.  
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~v~~S~~~~~a~~yr~~~~~~~~~~~  239 (405)
T d1h6za3         160 ALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGLLGT  239 (405)
T ss_dssp             TTHHHHHHHSCSCGGGCCHHHHHHHHHTTHHHHHHHSSSCCCCCHHHHHHHHHHHHHHTTTCTTTTTHHHHSCCCSCCCC
T ss_pred             HHHHHHHhccccccccCcHHHHHHHHHHHHHhhhhhcCCcccccchHHhHHHHHHHHhhhcCchHHHHHHhcCccchhhh
Confidence                                               01111    3789999999999999999999999999999742  


Q ss_pred             --cceeEEEEeecCCceeEEEEecCCCCCCCCcEEEEeecCCccccccccCCCCceEEEecCCCCCCccccccccccccC
Q 003754          627 --LCMAVLIQETICGDYAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLY  704 (798)
Q Consensus       627 --~~MAVLVQemV~a~~SGVlfT~nP~tg~~~~i~Iea~~GLGE~lVsG~~G~p~~f~v~k~~~~~~~vl~~~sk~v~~~  704 (798)
                        +.|+|++|+|+.+..+||+||.||.+|+.+.+.+++++|+|+.+|+|.. +|+.|..++....   .   ...     
T Consensus       240 ~~~~~~v~~~~~~~~~~sgv~~t~~~~tG~~~~~~~~~~~g~~~~vv~G~~-~~~~~~~~~~~~~---~---~~~-----  307 (405)
T d1h6za3         240 AVNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIR-TPQQINHSLSLRW---A---KAH-----  307 (405)
T ss_dssp             CEEEEECCCSCSSTTCEEEEEESSCSSSCCSSCEEEEEESCCTTHHHHCCS-CCEESSHHHHHHH---H---TTS-----
T ss_pred             hheeeeeeecccccccccccccccCCCCCCCceeeEecccCcceeeccCcc-CCceeeeecccch---h---hcc-----
Confidence              3455555566667799999999999999999999999999999999987 7876654442210   0   000     


Q ss_pred             CCceeEeecCCCCcccccccCCCceeeeecCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHhcCCCeeEEEEE
Q 003754          705 GKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVL  784 (798)
Q Consensus       705 ~~~~~i~~sds~gedle~~ag~Gl~~svp~~~~~~~~vdy~~~p~L~D~~~r~~~l~~La~la~~IE~~fG~PQDIEwai  784 (798)
                                            +.      .. .....++...+.+++++     +++|+++|.+||++||+|||||||+
T Consensus       308 ----------------------~~------~~-~~~~~~~~~~~~l~~e~-----~~~La~l~~~iE~~fg~PqDIEWAi  353 (405)
T d1h6za3         308 ----------------------GV------GE-EERRKRYPSMEEAMPEN-----YRLLCDVRKRLENHYRDMQDLEFTV  353 (405)
T ss_dssp             ----------------------SC------CH-HHHHHHSCCHHHHSHHH-----HHHHHHHHHHHHHHHTSCEEEEEEE
T ss_pred             ----------------------cc------ce-ecccccccchhhcCHHH-----HHHHHHHHHHHHHHcCCCcceEEEE
Confidence                                  00      00 00001112223345554     7899999999999999999999999


Q ss_pred             ECCEEEEEeeccC
Q 003754          785 KDGLIYVVQARPQ  797 (798)
Q Consensus       785 ~~g~LyIlQaRP~  797 (798)
                      ++|+|||||+||.
T Consensus       354 ~dg~L~ILQaRPv  366 (405)
T d1h6za3         354 QDGRLWLLQCRNG  366 (405)
T ss_dssp             ETTEEEEEEEEEC
T ss_pred             ECCEEEEEEccCC
Confidence            9999999999995
>d1vbga3 d.142.1.5 (A:3-382) Pyruvate phosphate dikinase, N-terminal domain {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1kbla3 d.142.1.5 (A:2-376) Pyruvate phosphate dikinase, N-terminal domain {Clostridium symbiosum [TaxId: 1512]} Back     information, alignment and structure
>d1zyma2 c.8.1.2 (A:3-21,A:145-249) N-terminal domain of enzyme I of the PEP:sugar phosphotransferase system {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1h6za2 c.8.1.1 (A:406-537) Pyruvate phosphate dikinase, central domain {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1vbga2 c.8.1.1 (A:383-517) Pyruvate phosphate dikinase, central domain {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1kbla2 c.8.1.1 (A:377-509) Pyruvate phosphate dikinase, central domain {Clostridium symbiosum [TaxId: 1512]} Back     information, alignment and structure
>d2hi6a1 c.8.2.3 (A:1-132) Hypothetical protein AF0055 {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure