Citrus Sinensis ID: 003824
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 793 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SX33 | 1200 | Putative phospholipid-tra | yes | no | 0.983 | 0.65 | 0.733 | 0.0 | |
| Q9LI83 | 1202 | Phospholipid-transporting | no | no | 0.998 | 0.658 | 0.731 | 0.0 | |
| Q9SAF5 | 1203 | Putative phospholipid-tra | no | no | 0.987 | 0.650 | 0.723 | 0.0 | |
| P57792 | 1184 | Putative phospholipid-tra | no | no | 0.972 | 0.651 | 0.718 | 0.0 | |
| Q9LK90 | 1189 | Putative phospholipid-tra | no | no | 0.938 | 0.625 | 0.677 | 0.0 | |
| Q9LNQ4 | 1216 | Putative phospholipid-tra | no | no | 0.982 | 0.640 | 0.579 | 0.0 | |
| Q9SGG3 | 1228 | Putative phospholipid-tra | no | no | 0.987 | 0.637 | 0.573 | 0.0 | |
| Q9LVK9 | 1243 | Putative phospholipid-tra | no | no | 0.979 | 0.625 | 0.564 | 0.0 | |
| Q9SLK6 | 1240 | Phospholipid-transporting | no | no | 0.984 | 0.629 | 0.546 | 0.0 | |
| Q9XIE6 | 1213 | Phospholipid-transporting | no | no | 0.928 | 0.606 | 0.486 | 0.0 |
| >sp|Q9SX33|ALA9_ARATH Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 1241 bits (3211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 587/800 (73%), Positives = 673/800 (84%), Gaps = 20/800 (2%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MYYEE DKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCS+AGT+YGRGVTEVE
Sbjct: 401 MYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVE 460
Query: 61 RAMARRKGSPL--------------EEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHA 106
AM RRKG PL +E +TEE +++KGFNF DERIMNG+WV E HA
Sbjct: 461 MAMGRRKGGPLVFQSDENDIDMEYSKEAITEE----STVKGFNFRDERIMNGNWVTETHA 516
Query: 107 DVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISV 166
DVIQKF RLLA+CHT +PEVDE+ KISYEAESPDEAAFVIAARELGFEF+ RTQT+ISV
Sbjct: 517 DVIQKFFRLLAVCHTVIPEVDEDTEKISYEAESPDEAAFVIAARELGFEFFNRTQTTISV 576
Query: 167 HELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENG 226
ELD V+G +VER Y +LNVLEF+S+RKRMSVIV+ E+G LLLL KGAD+VMFERL++NG
Sbjct: 577 RELDLVSGKRVERLYKVLNVLEFNSTRKRMSVIVQEEDGKLLLLCKGADNVMFERLSKNG 636
Query: 227 REFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIA 286
REFEE+T++H+NEYADAGLRTLILAYRELDEKEYK FNE +EAK+SVSADRE L EE+
Sbjct: 637 REFEEETRDHVNEYADAGLRTLILAYRELDEKEYKVFNERISEAKSSVSADRESLIEEVT 696
Query: 287 EKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ 346
EKIEK+LILLGATAVEDKLQNGVP+CIDKLAQAGIK+WVLTGDKMETAINIGFACSLLRQ
Sbjct: 697 EKIEKDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQ 756
Query: 347 GMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIID 406
M+Q+II+ ETPE ++LEK+ +K A A K +VL Q+I GK L S + ALIID
Sbjct: 757 DMKQIIINLETPEIQSLEKTGEKDVIAKASKENVLSQIINGKTQLKYSGGN--AFALIID 814
Query: 407 GKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGAND 466
GKSL YAL+DD+K +FLELA+ CASVICCRSSPKQKALVTRLVK+ TTLAIGDGAND
Sbjct: 815 GKSLAYALDDDIKHIFLELAVSCASVICCRSSPKQKALVTRLVKSGNGKTTLAIGDGAND 874
Query: 467 VGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYK 526
VGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCYRRIS+MICYFFYK
Sbjct: 875 VGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISTMICYFFYK 934
Query: 527 NIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPL 586
NI FGFTLF +E Y +FS P YNDWFLSLYNVFF+SLPVIALGVFDQDVSAR+CLKFPL
Sbjct: 935 NITFGFTLFLYETYTTFSSTPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPL 994
Query: 587 LYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMY 646
LYQEGVQN+LFSW RILGW NG +A IIFF C +++ QAF G+ G EILG TMY
Sbjct: 995 LYQEGVQNVLFSWRRILGWMFNGFYSAVIIFFLCKSSLQSQAFNHDGKTPGREILGGTMY 1054
Query: 647 TCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACA 706
TC+VWVVN QMAL+++YFT IQH+ IW I WY F+ YG + IST AYKVF+EA A
Sbjct: 1055 TCIVWVVNLQMALAISYFTLIQHIVIWSSIVVWYFFITVYGELPSRISTGAYKVFVEALA 1114
Query: 707 PAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRS 766
P+ S+WLITL V++++L+PYF YSA+QM FFP++H MIQW R +GQ +DPE+C +VRQRS
Sbjct: 1115 PSLSYWLITLFVVVATLMPYFIYSALQMSFFPMYHGMIQWLRYEGQCNDPEYCDIVRQRS 1174
Query: 767 LRPTTVGYTARFEASSRDLK 786
+RPTTVG+TAR EA R ++
Sbjct: 1175 IRPTTVGFTARLEAKKRSVR 1194
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|Q9LI83|ALA10_ARATH Phospholipid-transporting ATPase 10 OS=Arabidopsis thaliana GN=ALA10 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1224 bits (3166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 582/796 (73%), Positives = 667/796 (83%), Gaps = 4/796 (0%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MYYEETDKPA+ARTSNLNEELG VDTILSDKTGTLTCNSMEFIKCSIAG +YGRG+TEVE
Sbjct: 401 MYYEETDKPAQARTSNLNEELGMVDTILSDKTGTLTCNSMEFIKCSIAGKAYGRGITEVE 460
Query: 61 RAMA-RRKGSPLEEEVTEEQEDKAS--IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLA 117
RAMA R GSPL E + D++ +KGFNFEDER+MNG+WV +P A V+QKF RLLA
Sbjct: 461 RAMAVRSGGSPLVNEDLDVVVDQSGPKVKGFNFEDERVMNGNWVRQPEAAVLQKFFRLLA 520
Query: 118 ICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKV 177
+CHTA+PE DEE+G +SYEAESPDEAAFV+AARE GFEF+ RTQ IS ELD V+G KV
Sbjct: 521 VCHTAIPETDEESGNVSYEAESPDEAAFVVAAREFGFEFFNRTQNGISFRELDLVSGEKV 580
Query: 178 ERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHI 237
ER Y LLNVLEF+S+RKRMSVIVR ++G LLLLSKGAD+VMFERLA+NGR+FE +T+EH+
Sbjct: 581 ERVYRLLNVLEFNSTRKRMSVIVRDDDGKLLLLSKGADNVMFERLAKNGRQFEAKTQEHV 640
Query: 238 NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLG 297
N+YADAGLRTL+LAYRE+DE EY +FN+ F EAK SVS DRE L +EI +K+E++LILLG
Sbjct: 641 NQYADAGLRTLVLAYREVDENEYIEFNKSFNEAKASVSEDREALIDEITDKMERDLILLG 700
Query: 298 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET 357
ATAVEDKLQNGVPECIDKLAQAGIK+WVLTGDKMETAINIGFA SLLRQ M+Q+II+ ET
Sbjct: 701 ATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFASSLLRQEMKQIIINLET 760
Query: 358 PESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDD 417
P+ K+LEKS K A + SV+ QL GK LL +S S ALIIDGKSLTYALED+
Sbjct: 761 PQIKSLEKSGGKDEIELASRESVVMQLQEGKALLAASGASSEAFALIIDGKSLTYALEDE 820
Query: 418 VKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGV 477
+K +FL+LA CASVICCRSSPKQKALVTRLVK+ T TTLAIGDGANDVGMLQEADIGV
Sbjct: 821 IKKMFLDLATSCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGV 880
Query: 478 GISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFF 537
GISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCY RI+SMICYFFYKNI FG T+F +
Sbjct: 881 GISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRIASMICYFFYKNITFGVTVFLY 940
Query: 538 EAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILF 597
EAY SFSGQP YNDWFLSL+NVFF+SLPVIALGVFDQDVSARFC KFPLLYQEGVQNILF
Sbjct: 941 EAYTSFSGQPAYNDWFLSLFNVFFSSLPVIALGVFDQDVSARFCYKFPLLYQEGVQNILF 1000
Query: 598 SWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQM 657
SW RI+GW NG +A IFF C ++K Q F G+ G EILG TMYTCVVWVVN QM
Sbjct: 1001 SWKRIIGWMFNGFISALAIFFLCKESLKHQLFDPDGKTAGREILGGTMYTCVVWVVNLQM 1060
Query: 658 ALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLL 717
ALS++YFT++QH+ IWG I FWYIFL+ YGAM P ST AY VF+EA APAPS+WL TL
Sbjct: 1061 ALSISYFTWVQHIVIWGSIAFWYIFLMIYGAMTPSFSTDAYMVFLEALAPAPSYWLTTLF 1120
Query: 718 VLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTAR 777
V++ +L+PYF Y ++QMRFFP +HQMIQW R +G ++DPEF +MVRQRS+RPTTVGYTAR
Sbjct: 1121 VMIFALIPYFVYKSVQMRFFPKYHQMIQWIRYEGHSNDPEFVEMVRQRSIRPTTVGYTAR 1180
Query: 778 FEASSRDLKAKLEDSL 793
AS R A+ D +
Sbjct: 1181 RAASVRR-SARFHDQI 1195
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SAF5|ALA11_ARATH Putative phospholipid-transporting ATPase 11 OS=Arabidopsis thaliana GN=ALA11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1193 bits (3087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 570/788 (72%), Positives = 658/788 (83%), Gaps = 5/788 (0%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MYYEE DKPA ARTSNLNEELG VDTILSDKTGTLTCNSMEFIKCSIAGT+YGRG+TEVE
Sbjct: 400 MYYEENDKPAHARTSNLNEELGMVDTILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVE 459
Query: 61 RAMA-RRKGSPLEEEVTEEQEDKAS--IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLA 117
R+MA R GS L + + D++ IKGFNF DER+M G+WV + A V+QKF RLLA
Sbjct: 460 RSMAMRSNGSSLVGDDLDVVVDQSGPKIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLA 519
Query: 118 ICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKV 177
+CHTA+PE DE G +SYEAESPDEAAFV+AARE GFEF+ RTQ IS ELD +G V
Sbjct: 520 VCHTAIPETDEATGSVSYEAESPDEAAFVVAAREFGFEFFSRTQNGISFRELDLASGKTV 579
Query: 178 ERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHI 237
ER Y LLNVLEF+S+RKRMSVIVR E+G LLLLSKGAD+VMFERLA+NGR+FEE+T+EH+
Sbjct: 580 ERVYRLLNVLEFNSARKRMSVIVRDEDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHV 639
Query: 238 NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLG 297
NEYADAGLRTLILAYRE+DE EY +F++ F EAKNSV+ADRE L +EI E++E++LILLG
Sbjct: 640 NEYADAGLRTLILAYREVDENEYIEFSKNFNEAKNSVTADRESLIDEITEQMERDLILLG 699
Query: 298 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET 357
ATAVEDKLQNGVP+CIDKLAQAGIK+WVLTGDKMETAINIGFACSLLRQ M+Q+II+ ET
Sbjct: 700 ATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQEMKQIIINLET 759
Query: 358 PESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLG--PLALIIDGKSLTYALE 415
P K LEK+ +K A A + SV++Q+ GK LL +S+ + ALIIDGKSLTYALE
Sbjct: 760 PHIKALEKAGEKDAIEHASRESVVNQMEEGKALLTASSSASSHEAFALIIDGKSLTYALE 819
Query: 416 DDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADI 475
DD K FL+LA GCASVICCRSSPKQKALVTRLVK+ T TTLAIGDGANDVGMLQEADI
Sbjct: 820 DDFKKKFLDLATGCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADI 879
Query: 476 GVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 535
GVGISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCY RISSMICYFFYKNI FG T+F
Sbjct: 880 GVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRISSMICYFFYKNITFGVTVF 939
Query: 536 FFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNI 595
+EAY SFS QP YNDWFLSL+NVFF+SLPVIALGVFDQDVSAR+C KFPLLYQEGVQN+
Sbjct: 940 LYEAYTSFSAQPAYNDWFLSLFNVFFSSLPVIALGVFDQDVSARYCYKFPLLYQEGVQNL 999
Query: 596 LFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNC 655
LFSW RI+GW NGV A IFF C ++K Q + G+ G EILG TMYTCVVWVVN
Sbjct: 1000 LFSWKRIIGWMFNGVFTALAIFFLCKESLKHQLYNPNGKTAGREILGGTMYTCVVWVVNL 1059
Query: 656 QMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLIT 715
QMAL+++YFT++QH+ IWG + FWYIFL+ YGA+ P ST AYKVFIEA APAPS+WL T
Sbjct: 1060 QMALAISYFTWLQHIVIWGSVAFWYIFLMIYGAITPSFSTDAYKVFIEALAPAPSYWLTT 1119
Query: 716 LLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYT 775
L V+ +L+P+F + ++QMRFFP +HQMIQW R +G ++DPEF +MVRQRS+RPTTVG+T
Sbjct: 1120 LFVMFFALIPFFVFKSVQMRFFPGYHQMIQWIRYEGHSNDPEFVEMVRQRSIRPTTVGFT 1179
Query: 776 ARFEASSR 783
AR AS R
Sbjct: 1180 ARRAASVR 1187
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P57792|ALA12_ARATH Putative phospholipid-transporting ATPase 12 OS=Arabidopsis thaliana GN=ALA12 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1172 bits (3032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/777 (71%), Positives = 650/777 (83%), Gaps = 6/777 (0%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MYYEE DKPA ARTSNLNEELGQV TILSDKTGTLTCNSMEFIKCSIAGT+YGRGVTEVE
Sbjct: 401 MYYEEADKPAHARTSNLNEELGQVGTILSDKTGTLTCNSMEFIKCSIAGTAYGRGVTEVE 460
Query: 61 RAMARRKGSPLEEEVTEEQEDKA-----SIKGFNFEDERIMNGSWVNEPHADVIQKFLRL 115
AM +RKGS L + + A ++KGFNF DERIM+G+WV E HADVIQKF +L
Sbjct: 461 MAMDKRKGSALVNQSNGNSTEDAVAAEPAVKGFNFRDERIMDGNWVTETHADVIQKFFQL 520
Query: 116 LAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGT 175
LA+CHT +PEVDE+ GKISYEAESPDEAAFVIAARELGFEF+ RTQT+ISV ELD VTG
Sbjct: 521 LAVCHTVIPEVDEDTGKISYEAESPDEAAFVIAARELGFEFFTRTQTTISVRELDLVTGE 580
Query: 176 KVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKE 235
+VER YS+LNVLEFSSS+KRMSVIV+ ++G LLLL KGADSVMFERL+E+GR++E++T++
Sbjct: 581 RVERLYSVLNVLEFSSSKKRMSVIVQDQDGKLLLLCKGADSVMFERLSESGRKYEKETRD 640
Query: 236 HINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLIL 295
H+NEYADAGLRTLILAYRELDE EY+ F E +EAKNSVSADRE L +E+ EKIEKNL+L
Sbjct: 641 HVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSADREALIDEVTEKIEKNLVL 700
Query: 296 LGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISS 355
LGATAVEDKLQNGVP+CI+KLAQAGIK+WVLTGDKMETAINIGFACSLLR+ M+Q+II+
Sbjct: 701 LGATAVEDKLQNGVPDCINKLAQAGIKIWVLTGDKMETAINIGFACSLLRRDMKQIIINL 760
Query: 356 ETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALE 415
ETPE + LEKS +K A AA LK +VLHQ+ GK L +S + ALIIDGKSL YALE
Sbjct: 761 ETPEIQQLEKSGEKDAIAA-LKENVLHQITSGKAQLKASGGNAKAFALIIDGKSLAYALE 819
Query: 416 DDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADI 475
+D+K +FLELAIGCASVICCRSSPKQKALVTRLVKT + TTLAIGDGANDVGMLQEADI
Sbjct: 820 EDMKGIFLELAIGCASVICCRSSPKQKALVTRLVKTGSGQTTLAIGDGANDVGMLQEADI 879
Query: 476 GVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 535
GVGISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCYRRIS MICYFFYKNI FGFTLF
Sbjct: 880 GVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISKMICYFFYKNITFGFTLF 939
Query: 536 FFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNI 595
+EAY SFS P YNDW+LSLY+VFFTSLPVI LG+FDQDVSA FCLKFP+LYQEGVQN+
Sbjct: 940 LYEAYTSFSATPAYNDWYLSLYSVFFTSLPVICLGIFDQDVSAPFCLKFPVLYQEGVQNL 999
Query: 596 LFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNC 655
LFSW RIL W +G +A IIFF C +++ QAF G+ G +ILG TMYTCVVWVV+
Sbjct: 1000 LFSWRRILSWMFHGFCSAIIIFFLCKTSLESQAFNHEGKTAGRDILGGTMYTCVVWVVSL 1059
Query: 656 QMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLIT 715
QM L+++YFT IQH+ +WG + WY+FL+ YG++ +ST AY VF+EA APAPS+W+ T
Sbjct: 1060 QMVLTISYFTLIQHVVVWGSVVIWYLFLMVYGSLPIRMSTDAYMVFLEALAPAPSYWITT 1119
Query: 716 LLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTV 772
L V++S+++PYF +SAIQMRFFP+ H +Q R + Q + +M RQ S+RPT V
Sbjct: 1120 LFVVLSTMMPYFIFSAIQMRFFPMSHGTVQLLRYEDQCSNSGNFEMGRQGSVRPTLV 1176
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LK90|ALA8_ARATH Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1090 bits (2820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/753 (67%), Positives = 627/753 (83%), Gaps = 9/753 (1%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MY+EETD+PARARTSNLNEELGQVDTILSDKTGTLTCNSMEF+KCSIAGT+YGRG+TEVE
Sbjct: 395 MYHEETDRPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGTAYGRGMTEVE 454
Query: 61 RAMARRKGSPLEEEVTEEQ----EDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLL 116
A+ ++KG +EEV + + +++ ++KGFNF DERI++G W+N+P+A++IQKF R+L
Sbjct: 455 VALRKQKGLMTQEEVGDNESLSIKEQKAVKGFNFWDERIVDGQWINQPNAELIQKFFRVL 514
Query: 117 AICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTK 176
AICHTA+P+V+ + G+I+YEAESPDEAAFVIA+RELGFEF+ R+QTSIS+HE+D +TG K
Sbjct: 515 AICHTAIPDVNSDTGEITYEAESPDEAAFVIASRELGFEFFSRSQTSISLHEIDHMTGEK 574
Query: 177 VERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEH 236
V+R Y LL+VLEFSSSRKRMSVIVR+ E LLLLSKGADSVMF+RLA++GR+ E +TKEH
Sbjct: 575 VDRVYELLHVLEFSSSRKRMSVIVRNPENRLLLLSKGADSVMFKRLAKHGRQNERETKEH 634
Query: 237 INEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILL 296
I +YA+AGLRTL++ YRE+DE EY + EEF AK V+ DR+ L + A+KIEK+LILL
Sbjct: 635 IKKYAEAGLRTLVITYREIDEDEYIVWEEEFLNAKTLVTEDRDALIDAAADKIEKDLILL 694
Query: 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSE 356
G+TAVEDKLQ GVP+CI+KL+QAG+K+WVLTGDK ETAINIG+ACSLLR+GM+Q++++ +
Sbjct: 695 GSTAVEDKLQKGVPDCIEKLSQAGVKIWVLTGDKTETAINIGYACSLLREGMKQILVTLD 754
Query: 357 TPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL-----DSSNESLGPLALIIDGKSLT 411
+ + + LEK DK A A A S+ QL G +S+ E+ L+IDGKSLT
Sbjct: 755 SSDIEALEKQGDKEAVAKASFQSIKKQLREGMSQTAAVTDNSAKENSEMFGLVIDGKSLT 814
Query: 412 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 471
YAL+ ++ FLELAI C SVICCRSSPKQKALVTRLVK T TTLAIGDGANDVGMLQ
Sbjct: 815 YALDSKLEKEFLELAIRCNSVICCRSSPKQKALVTRLVKNGTGRTTLAIGDGANDVGMLQ 874
Query: 472 EADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFG 531
EADIGVGISG EGMQAVM+SD AIAQFRFLERLLLVHGHWCYRRI+ MICYFFYKN+AFG
Sbjct: 875 EADIGVGISGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRITLMICYFFYKNLAFG 934
Query: 532 FTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEG 591
FTLF++EAYASFSG+P YNDW++S YNVFFTSLPVIALGVFDQDVSAR CLK+PLLYQEG
Sbjct: 935 FTLFWYEAYASFSGKPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLYQEG 994
Query: 592 VQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVW 651
VQN+LFSW RILGW LNGV ++ IIFF I+ M QAFRK G+V+ +LG TMY+ VVW
Sbjct: 995 VQNVLFSWERILGWMLNGVISSMIIFFLTINTMATQAFRKDGQVVDYSVLGVTMYSSVVW 1054
Query: 652 VVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSF 711
VNCQMA+S+ YFT+IQH FIWG I WY+FL+ YG++ P STTA++VF+E AP+P +
Sbjct: 1055 TVNCQMAISINYFTWIQHCFIWGSIGVWYLFLVIYGSLPPTFSTTAFQVFVETSAPSPIY 1114
Query: 712 WLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMI 744
WL+ LV+ S+LLPYFTY A Q++F P++H +I
Sbjct: 1115 WLVLFLVVFSALLPYFTYRAFQIKFRPMYHDII 1147
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LNQ4|ALA4_ARATH Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/810 (57%), Positives = 602/810 (74%), Gaps = 31/810 (3%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MY E+ PA ARTSNLNEELGQVDTILSDKTGTLTCN M+F+KCSIAGTSYG +EVE
Sbjct: 396 MYDSESGVPAHARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVE 455
Query: 61 RAMARRKGSPLEE------------------EVTEEQEDKASIKGFNFEDERIMNGSWVN 102
A A++ L+E EV + IKGF FED R+M+G+W+
Sbjct: 456 VAAAQQMAVDLDEHGEVSSRTSTPRAQARDIEVESSITPRIPIKGFGFEDIRLMDGNWLR 515
Query: 103 EPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQT 162
EPH D I F R+LAICHTA+PE++EE GK +YEAESPDEA+F+ AA E GF F++RTQ+
Sbjct: 516 EPHTDDILLFFRILAICHTAIPELNEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQS 575
Query: 163 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERL 222
S+ VHE +G +ER Y +LN+L+F+S RKRMSV+VR EEG +LLL KGADS++FERL
Sbjct: 576 SVYVHERLSHSGQTIEREYKVLNLLDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFERL 635
Query: 223 AENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELA 282
A+NG+ + T +H+NEY +AGLRTL L+YR+LDE+EY +N EF +AK S+ +DR+EL
Sbjct: 636 AKNGKVYLGPTTKHLNEYGEAGLRTLALSYRKLDEEEYSAWNAEFHKAKTSIGSDRDELL 695
Query: 283 EEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACS 342
E I++ IEK+LIL+GATAVEDKLQ GVP+CIDKLAQAG+KLWVLTGDKMETAINIG++CS
Sbjct: 696 ERISDMIEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYSCS 755
Query: 343 LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLA 402
LLRQGM+Q+ I T+ SE S A A+K ++L+Q+ + +++ + A
Sbjct: 756 LLRQGMKQICI--------TVVNSEGASQDAKAVKDNILNQITKAVQMVKLEKDPHAAFA 807
Query: 403 LIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 462
LIIDGK+LTYALED++K FL LA+ CASVICCR SPKQKALVTRLVK T TLAIGD
Sbjct: 808 LIIDGKTLTYALEDEMKYQFLALAVDCASVICCRVSPKQKALVTRLVKEGTGKITLAIGD 867
Query: 463 GANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICY 522
GANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQFRFLERLL+VHGHWCY+RI+ MICY
Sbjct: 868 GANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICY 927
Query: 523 FFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCL 582
FFYKNIAFG TLF+FEA+ FSGQ VYND++L L+NV TSLPVIALGVF+QDVS+ CL
Sbjct: 928 FFYKNIAFGLTLFYFEAFTGFSGQSVYNDYYLLLFNVVLTSLPVIALGVFEQDVSSEICL 987
Query: 583 KFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILG 642
+FP LYQ+G +N+ F W RILGW NGV ++ +IFF I + +QAFR G+ ++ +G
Sbjct: 988 QFPALYQQGKKNLFFDWYRILGWMGNGVYSSLVIFFLNIGIIYEQAFRVSGQTADMDAVG 1047
Query: 643 TTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFI 702
TTM+TC++W VN Q+AL+V++FT+IQH+ IWG I WY+F+ YG M P +S Y++ +
Sbjct: 1048 TTMFTCIIWAVNVQIALTVSHFTWIQHVLIWGSIGLWYLFVALYGMMPPSLSGNIYRILV 1107
Query: 703 EACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQ---WFRSDGQTDDPEFC 759
E APAP +W+ T LV ++++LPYF + + Q PL H +IQ +++ D +D
Sbjct: 1108 EILAPAPIYWIATFLVTVTTVLPYFAHISFQRFLHPLDHHIIQEIKYYKRD--VEDRRMW 1165
Query: 760 QMVRQRSLRPTTVGYTARFEASSRDLKAKL 789
R ++ T +G+TAR +A R L++KL
Sbjct: 1166 TRERTKAREKTKIGFTARVDAKIRHLRSKL 1195
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SGG3|ALA5_ARATH Putative phospholipid-transporting ATPase 5 OS=Arabidopsis thaliana GN=ALA5 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 963 bits (2489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/820 (57%), Positives = 595/820 (72%), Gaps = 37/820 (4%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MY +E+ PA ARTSNLNEELGQV TILSDKTGTLTCN M+F+KCSIAGTSYG +EVE
Sbjct: 396 MYDDESGVPANARTSNLNEELGQVHTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVE 455
Query: 61 RAMARRKGSPLEE------------------------EVTEEQED-----KASIKGFNFE 91
A A++ LEE E+ E ++ +A IKGF FE
Sbjct: 456 VAAAKQMAVDLEEHGEISSTPQSQTKVYGTWDSSRTQEIEVEGDNNYNTPRAPIKGFGFE 515
Query: 92 DERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARE 151
D R+MNG+W+ E + I +F R+LAICHTA+PE++EE GK +YEAESPDEA+F+ AARE
Sbjct: 516 DNRLMNGNWLRESQPNDILQFFRILAICHTAIPELNEETGKYTYEAESPDEASFLAAARE 575
Query: 152 LGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLS 211
GFEF++RTQ+S+ + E +G +ER Y +LN+LEF+S RKRM+VIVR EEG +LLL
Sbjct: 576 FGFEFFKRTQSSVFIRERFSGSGQIIEREYKVLNLLEFTSKRKRMTVIVRDEEGQILLLC 635
Query: 212 KGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAK 271
KGADS++FERLA+NG+ + T H+ EY +AGLRTL LAYR+LDE EY +N EF +AK
Sbjct: 636 KGADSIIFERLAKNGKTYLGPTTRHLTEYGEAGLRTLALAYRKLDEDEYAAWNSEFLKAK 695
Query: 272 NSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKM 331
S+ +DR+EL E A+ IEK LIL+GATAVEDKLQ GVP+CIDKLAQAG+KLWVLTGDKM
Sbjct: 696 TSIGSDRDELLETGADMIEKELILIGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKM 755
Query: 332 ETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 391
ETAINIGFACSLLRQGMRQ+ I+S E S+D + +K ++L+QL + +++
Sbjct: 756 ETAINIGFACSLLRQGMRQICITSMNSEGG----SQD---SKRVVKENILNQLTKAVQMV 808
Query: 392 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKT 451
+ ALIIDGK+LTYALEDD+K FL LA+ CASVICCR SPKQKALV RLVK
Sbjct: 809 KLEKDPHAAFALIIDGKTLTYALEDDMKYQFLALAVDCASVICCRVSPKQKALVVRLVKE 868
Query: 452 KTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHW 511
T TTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQFRFLERLL+VHGHW
Sbjct: 869 GTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHW 928
Query: 512 CYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGV 571
CY+RI+ MICYFFYKNIAFG TLF+FEA+ FSGQ VYND++L L+NV TSLPVIALGV
Sbjct: 929 CYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYNDYYLLLFNVVLTSLPVIALGV 988
Query: 572 FDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRK 631
F+QDVS+ CL+FP LYQ+G +N+ F W+RILGW NGV + +IFF I + QAFR
Sbjct: 989 FEQDVSSEICLQFPALYQQGTKNLFFDWSRILGWMCNGVYASLVIFFLNIGIIYSQAFRD 1048
Query: 632 GGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDP 691
G+ ++ +GTTM+TC++W N Q+AL++++FT+IQH+ IWG I WY+F+ Y M P
Sbjct: 1049 NGQTADMDAVGTTMFTCIIWAANVQIALTMSHFTWIQHVLIWGSIGMWYLFVAIYSMMPP 1108
Query: 692 YISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDG 751
S Y++ E APAP +W+ TLLV ++++LPY + A Q PL H +IQ + G
Sbjct: 1109 SYSGNIYRILDEILAPAPIYWMATLLVTVAAVLPYVAHIAFQRFLNPLDHHIIQEIKYYG 1168
Query: 752 Q-TDDPEFCQMVRQRSLRPTTVGYTARFEASSRDLKAKLE 790
+ +D R ++ T +G+TAR +A R L++KL
Sbjct: 1169 RDIEDARLWTRERTKAREKTKIGFTARVDAKIRHLRSKLN 1208
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LVK9|ALA7_ARATH Putative phospholipid-transporting ATPase 7 OS=Arabidopsis thaliana GN=ALA7 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 959 bits (2479), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/833 (56%), Positives = 595/833 (71%), Gaps = 56/833 (6%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MY E+ PA+ARTSNLNEELGQVDTILSDKTGTLTCN M+F+KCSIAGTSYG +EVE
Sbjct: 396 MYDSESGTPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTSYGVRASEVE 455
Query: 61 RAMARRKGSPLEEEVTEE--------------------------------------QEDK 82
A A++ L+EE EE Q
Sbjct: 456 LAAAKQMAIDLDEEQGEEVTHLPRTRGRMHGYAKMPSKTSSDIELETVITATDEGDQTQS 515
Query: 83 ASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDE 142
IKGF+FED+R+M G+W+NEP++D I FLR+LA+CHTA+PEVDE+ GK +YEAESPDE
Sbjct: 516 TGIKGFSFEDQRLMGGNWLNEPNSDDILMFLRILAVCHTAIPEVDEDTGKCTYEAESPDE 575
Query: 143 AAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRS 202
AF++AA E GFEF +RTQ+S+ + E +G VER Y +LNVL+F+S RKRMSVIVR
Sbjct: 576 VAFLVAAGEFGFEFTKRTQSSVFISERH--SGQPVEREYKVLNVLDFTSKRKRMSVIVRD 633
Query: 203 EEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQ 262
E+G +LLL KGADS++FERL++NG+ + E T +H+N Y +AGLRTL L+YR+LDE EY
Sbjct: 634 EKGQILLLCKGADSIIFERLSKNGKNYLEATSKHLNGYGEAGLRTLALSYRKLDETEYSI 693
Query: 263 FNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIK 322
+N EF +AK SV ADR+E+ E++++ +EK LIL+GATAVEDKLQ GVP+CIDKLAQAG+K
Sbjct: 694 WNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDKLAQAGLK 753
Query: 323 LWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382
+WVLTGDKMETAINIG+ACSLLRQGM+Q+ I+ E S+D AAA + ++L
Sbjct: 754 IWVLTGDKMETAINIGYACSLLRQGMKQIYIALRNEEGS----SQDPEAAA---RENILM 806
Query: 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQK 442
Q+I +++ + ALIIDGK+LTYALEDD+K FL LA+ CASVICCR SPKQK
Sbjct: 807 QIINASQMIKLEKDPHAAFALIIDGKTLTYALEDDIKYQFLALAVDCASVICCRVSPKQK 866
Query: 443 ALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLE 502
ALVTRL K T TTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQFRFLE
Sbjct: 867 ALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLE 926
Query: 503 RLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFT 562
RLL+VHGHWCY+RI+ MICYFFYKNI FG TLF+FEA+ FSGQ +YND +L L+NV T
Sbjct: 927 RLLVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFEAFTGFSGQAIYNDSYLLLFNVILT 986
Query: 563 SLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIH 622
SLPVIALGVF+QDVS+ CL+FP LYQ+G +N+ F W RI+GW NGV + +IF I
Sbjct: 987 SLPVIALGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRIIGWMANGVYASVVIFSLNIG 1046
Query: 623 AMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIF 682
Q+F GG+ ++ +GT M+TC++W VN Q+AL++++FT+IQH+ IWG I WYIF
Sbjct: 1047 IFHVQSFCSGGQTADMDAMGTAMFTCIIWAVNVQIALTMSHFTWIQHVLIWGSIVTWYIF 1106
Query: 683 LLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQ 742
L +G + P +S + + E APAP FWL +LLV+ ++ LPY Y + Q PL H
Sbjct: 1107 LALFGMLPPKVSGNIFHMLSETLAPAPIFWLTSLLVIAATTLPYLAYISFQRSLNPLDHH 1166
Query: 743 MIQ---WFRSDGQTDDPEFCQMVRQRS--LRPTTVGYTARFEASSRDLKAKLE 790
+IQ FR D Q + C R+RS T +G TAR +A R L+ +L+
Sbjct: 1167 IIQEIKHFRIDVQDE----CMWTRERSKAREKTKIGVTARVDAKIRQLRGRLQ 1215
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SLK6|ALA6_ARATH Phospholipid-transporting ATPase 6 OS=Arabidopsis thaliana GN=ALA6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/830 (54%), Positives = 588/830 (70%), Gaps = 49/830 (5%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
+Y E+ PA+ARTSNLNEELGQVDTILSDKTGTLTCN M+F+KCSIAGTSYG +EVE
Sbjct: 397 LYDSESGTPAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTSYGVRASEVE 456
Query: 61 RAMARRKGSPLEEEVTE-------------------------------------EQEDKA 83
A A++ LEE+ E +Q+
Sbjct: 457 LAAAKQMAMDLEEKGEEVANLSMNKGRTQRYAKLASKTSSDFELETVVTASDEKDQKQNT 516
Query: 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEA 143
+KGF+FED R+MN +W+NEP++D I F R+LA+CHTA+PEVDE+ G +YEAESPDE
Sbjct: 517 GVKGFSFEDNRLMNENWLNEPNSDDILMFFRILAVCHTAIPEVDEDTGMCTYEAESPDEV 576
Query: 144 AFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE 203
AF++A+RE GFEF +RTQ+S+ + E +G V+R Y +LN+L+F+S RKRMS IVR E
Sbjct: 577 AFLVASREFGFEFTKRTQSSVFIAERFSSSGQPVDREYKILNLLDFTSKRKRMSAIVRDE 636
Query: 204 EGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQF 263
EG +LLL KGADS++FERL+++G+E+ T +H+N Y +AGLRTL L YR+LDE EY +
Sbjct: 637 EGQILLLCKGADSIIFERLSKSGKEYLGATSKHLNVYGEAGLRTLALGYRKLDETEYAAW 696
Query: 264 NEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKL 323
N EF +AK SV ADR+E+ E++++ +EK LIL+GATAVEDKLQ GVP+CID LAQAG+K+
Sbjct: 697 NSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQAGLKI 756
Query: 324 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383
WVLTGDKMETAINIG+ACSLLRQGM+Q+ IS E E S++ AAA K S+L Q
Sbjct: 757 WVLTGDKMETAINIGYACSLLRQGMKQISISLTNVE----ESSQNSEAAA---KESILMQ 809
Query: 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKA 443
+ +++ + ALIIDGK+LTYAL+DDVK FL LA+ CASVICCR SPKQKA
Sbjct: 810 ITNASQMIKIEKDPHAAFALIIDGKTLTYALKDDVKYQFLALAVDCASVICCRVSPKQKA 869
Query: 444 LVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLER 503
LVTRL K T TTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQFRFLER
Sbjct: 870 LVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLER 929
Query: 504 LLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTS 563
LL+VHGHWCY+RI+ MICYFFYKNI FG TLF+FE + FSGQ +YND +L L+NV TS
Sbjct: 930 LLVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFECFTGFSGQSIYNDSYLLLFNVVLTS 989
Query: 564 LPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHA 623
LPVI+LGVF+QDV + CL+FP LYQ+G +N+ F W RILGW NGV + +IF +
Sbjct: 990 LPVISLGVFEQDVPSDVCLQFPALYQQGPKNLFFDWYRILGWMGNGVYASIVIFTLNLGI 1049
Query: 624 MKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFL 683
Q+FR G+ + +GT M+TC++W VN Q+AL++++FT+IQH+ IWG I WY+FL
Sbjct: 1050 FHVQSFRSDGQTADMNAMGTAMFTCIIWAVNVQIALTMSHFTWIQHVMIWGSIGAWYVFL 1109
Query: 684 LAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQM 743
YG + +S + + +E APAP FWL +LLV+ ++ LPY + + Q PL H +
Sbjct: 1110 ALYGMLPVKLSGNIFHMLVEILAPAPIFWLTSLLVIAATTLPYLFHISYQRSVNPLDHHI 1169
Query: 744 IQ---WFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEASSRDLKAKLE 790
IQ FR D +D + + ++ T +G+TAR +A R L+ +L+
Sbjct: 1170 IQEIKHFRID--VEDERMWKREKSKAREKTKIGFTARVDAKIRQLRGRLQ 1217
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/754 (48%), Positives = 494/754 (65%), Gaps = 18/754 (2%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MY+ ET+ PA ARTSNLNEELGQV+ I SDKTGTLT N MEF KCSI G SYG GVTE+E
Sbjct: 384 MYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSYGCGVTEIE 443
Query: 61 RAMARRKGSPLEEEVTEEQEDKASI--KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAI 118
+ +A+R G +V EEQ +I KGFNF+D R+M G+W NEP+ D+ ++ R LAI
Sbjct: 444 KGIAQRHGL----KVQEEQRSTGAIREKGFNFDDPRLMRGAWRNEPNPDLCKELFRCLAI 499
Query: 119 CHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVE 178
CHT LPE DE KI Y+A SPDEAA V AA+ GF FY RT T + V E K++
Sbjct: 500 CHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTMVYVRESHVEKMGKIQ 559
Query: 179 R-SYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHI 237
+Y +LNVLEF+S+RKR SV+ R +G L+L KGAD+V+FERLA + + T+EH+
Sbjct: 560 DVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERLANGMDDVRKVTREHL 619
Query: 238 NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLG 297
+ +GLRTL LAY++L+ + Y +NE+F +AK+++ DRE+ +E+AE IEK+LIL+G
Sbjct: 620 EHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALR-DREKKLDEVAELIEKDLILIG 678
Query: 298 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET 357
+TA+EDKLQ GVP CI+ L++AGIK+WVLTGDKMETAINI +AC+L+ M+Q +ISSET
Sbjct: 679 STAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFVISSET 738
Query: 358 PESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESL----GP-LALIIDGKSLTY 412
+ E+ D+ A +K V +L K+ L+ + SL GP L+L+IDGK L Y
Sbjct: 739 DAIREAEERGDQVEIARVIKEEVKREL---KKSLEEAQHSLHTVAGPKLSLVIDGKCLMY 795
Query: 413 ALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQE 472
AL+ ++ + L L++ C SV+CCR SP QKA VT LV+ TL+IGDGANDV M+Q
Sbjct: 796 ALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIGDGANDVSMIQA 855
Query: 473 ADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGF 532
A +G+GISG+EGMQAVM+SD AIAQFRFL LLLVHG W Y RI ++ YFFYKN+ F
Sbjct: 856 AHVGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVMYFFYKNLTFTL 915
Query: 533 TLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGV 592
T F+F FSGQ Y+DWF SL+NV FT+LPVI LG+F++DVSA ++P LY+EG+
Sbjct: 916 TQFWFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKDVSASLSKRYPELYREGI 975
Query: 593 QNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWV 652
+N F W + WA + V + + + F + A G+V GL + T ++TC+V
Sbjct: 976 RNSFFKWRVVAVWATSAVYQSLVCYLF-VTTSSFGAVNSSGKVFGLWDVSTMVFTCLVIA 1034
Query: 653 VNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAY-GAMDPYISTTAYKVFIEACAPAPSF 711
VN ++ L T ++ + G I W +F Y G M P+ I F
Sbjct: 1035 VNVRILLMSNSITRWHYITVGGSILAWLVFAFVYCGIMTPHDRNENVYFVIYVLMSTFYF 1094
Query: 712 WLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQ 745
+ LLV + SLL F + ++ FFP +Q++Q
Sbjct: 1095 YFTLLLVPIVSLLGDFIFQGVERWFFPYDYQIVQ 1128
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 793 | ||||||
| 224121336 | 1183 | aminophospholipid ATPase [Populus tricho | 0.987 | 0.661 | 0.844 | 0.0 | |
| 356567694 | 1189 | PREDICTED: putative phospholipid-transpo | 0.984 | 0.656 | 0.836 | 0.0 | |
| 356516900 | 1190 | PREDICTED: putative phospholipid-transpo | 0.984 | 0.656 | 0.835 | 0.0 | |
| 356563129 | 1217 | PREDICTED: putative phospholipid-transpo | 0.987 | 0.643 | 0.804 | 0.0 | |
| 356513878 | 1205 | PREDICTED: putative phospholipid-transpo | 0.987 | 0.649 | 0.807 | 0.0 | |
| 225455798 | 1192 | PREDICTED: putative phospholipid-transpo | 0.994 | 0.661 | 0.810 | 0.0 | |
| 255541872 | 1187 | Phospholipid-transporting ATPase, putati | 0.987 | 0.659 | 0.815 | 0.0 | |
| 449439369 | 1196 | PREDICTED: putative phospholipid-transpo | 0.987 | 0.654 | 0.780 | 0.0 | |
| 449439677 | 1196 | PREDICTED: putative phospholipid-transpo | 0.984 | 0.653 | 0.778 | 0.0 | |
| 449486875 | 1196 | PREDICTED: LOW QUALITY PROTEIN: putative | 0.984 | 0.653 | 0.780 | 0.0 |
| >gi|224121336|ref|XP_002318557.1| aminophospholipid ATPase [Populus trichocarpa] gi|222859230|gb|EEE96777.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1415 bits (3664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 667/790 (84%), Positives = 729/790 (92%), Gaps = 7/790 (0%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MY+EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCS+AGTSYGRGVTEVE
Sbjct: 393 MYHEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTSYGRGVTEVE 452
Query: 61 RAMARRKGSPLEEE-------VTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFL 113
+ MARRKGSPL +E V E K S+KGFNF DERI NG WVNEPHADV+QKFL
Sbjct: 453 KDMARRKGSPLPQEETEEEDIVEGVAEGKPSVKGFNFVDERITNGHWVNEPHADVVQKFL 512
Query: 114 RLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVT 173
RLLAICHTA+PE+DEE G+ISYEAESPDEAAFVIAARELGF+FYERTQTSI +HELD V+
Sbjct: 513 RLLAICHTAIPEIDEETGRISYEAESPDEAAFVIAARELGFKFYERTQTSILLHELDLVS 572
Query: 174 GTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQT 233
GTKVERSY LLN++EF+SSRKRMSVIVR+E+G LLLL KGADSVMFERLA +GREFEE T
Sbjct: 573 GTKVERSYQLLNIIEFNSSRKRMSVIVRNEKGKLLLLCKGADSVMFERLARDGREFEEPT 632
Query: 234 KEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNL 293
+EHI EYADAGLRTL+LAYRELDE+EY +FN EFTEAKNS+SADRE++ EE+AEKIE++L
Sbjct: 633 REHIGEYADAGLRTLVLAYRELDEEEYDEFNHEFTEAKNSLSADREDMIEEVAEKIERDL 692
Query: 294 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVII 353
ILLGATAVEDKLQNGVPECIDKLAQAGIK+WVLTGDKMETAINIGFACSLLRQGM+Q+II
Sbjct: 693 ILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIII 752
Query: 354 SSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYA 413
SS+TPE+K LEK EDK+A ALKASV+HQ+ GK LL +S+E+ LALIIDGKSLTYA
Sbjct: 753 SSDTPENKALEKMEDKAAGVTALKASVVHQMNEGKALLTASSETSEALALIIDGKSLTYA 812
Query: 414 LEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEA 473
+EDDVK+LFLELAIGCASVICCRSSPKQKALVTRLVK+KT TTLAIGDGANDVGMLQEA
Sbjct: 813 IEDDVKNLFLELAIGCASVICCRSSPKQKALVTRLVKSKTGKTTLAIGDGANDVGMLQEA 872
Query: 474 DIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFT 533
DIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFT
Sbjct: 873 DIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFT 932
Query: 534 LFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQ 593
LFF+EAYASFSGQP YNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQ
Sbjct: 933 LFFYEAYASFSGQPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQ 992
Query: 594 NILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVV 653
N+LFSW RI GWA NGV++A +IFFFCI AM+ QAFRKGGEV+GLEILG TMYTCVVWVV
Sbjct: 993 NVLFSWIRIFGWAFNGVSSAVLIFFFCIRAMEHQAFRKGGEVVGLEILGATMYTCVVWVV 1052
Query: 654 NCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWL 713
NCQMALS+ YFTYIQHLFIWGGI FWYIFL+ YGAMDPY+STTAYKVF+EACAPAPS+WL
Sbjct: 1053 NCQMALSINYFTYIQHLFIWGGIVFWYIFLMVYGAMDPYLSTTAYKVFVEACAPAPSYWL 1112
Query: 714 ITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVG 773
ITLLVL+SSL+PYF YSAIQMRFFPL+HQMI W R+DGQT+DPE+C MVRQRSLRPTTVG
Sbjct: 1113 ITLLVLLSSLIPYFIYSAIQMRFFPLYHQMIHWLRNDGQTEDPEYCNMVRQRSLRPTTVG 1172
Query: 774 YTARFEASSR 783
YTAR+ A S+
Sbjct: 1173 YTARYVAKSK 1182
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567694|ref|XP_003552052.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1384 bits (3581), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 654/782 (83%), Positives = 716/782 (91%), Gaps = 1/782 (0%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MYYEETD+PA ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAG +YG+GVTEVE
Sbjct: 397 MYYEETDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGIAYGQGVTEVE 456
Query: 61 RAMARRKGSPLEEEVTEEQE-DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAIC 119
RA+ARRKG P ++E+TE+ K+SIKGFNF DERIMNG+W+NEPHA+VIQ FLRLLA+C
Sbjct: 457 RALARRKGVPTDQELTEDGNVPKSSIKGFNFMDERIMNGNWINEPHANVIQNFLRLLAVC 516
Query: 120 HTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVER 179
HTA+PEVD+E GK+SYEAESPDEAAFV+AARELGFEFYERTQT+IS+HE +P +G ER
Sbjct: 517 HTAIPEVDDEIGKVSYEAESPDEAAFVVAARELGFEFYERTQTNISLHEFNPRSGKTTER 576
Query: 180 SYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINE 239
SY LLN+LEFSS+RKRMSVIVR EEG LLL SKGADSVMFERLA NGREFEE+TK+HI E
Sbjct: 577 SYKLLNILEFSSTRKRMSVIVRDEEGKLLLFSKGADSVMFERLARNGREFEEKTKQHIEE 636
Query: 240 YADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGAT 299
YADAGLRTLILAYRELDE+EY FNEEF EAKN VSADRE++ EEI+EKIEK+LILLG T
Sbjct: 637 YADAGLRTLILAYRELDEEEYNLFNEEFMEAKNLVSADREQIVEEISEKIEKDLILLGVT 696
Query: 300 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE 359
AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM+Q+IISS+T E
Sbjct: 697 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTTE 756
Query: 360 SKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVK 419
+K+LEK EDKSAAA A+KASV+HQL +GKELL S+E+ LALIIDGKSLTYALEDDVK
Sbjct: 757 TKSLEKMEDKSAAAVAIKASVIHQLAKGKELLAESDENSEALALIIDGKSLTYALEDDVK 816
Query: 420 DLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGI 479
DLFLELA+GCASVICCRSSPKQKALVTRLVK KT STTLAIGDGANDVGMLQEADIG+GI
Sbjct: 817 DLFLELAVGCASVICCRSSPKQKALVTRLVKIKTGSTTLAIGDGANDVGMLQEADIGIGI 876
Query: 480 SGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEA 539
SGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF+E
Sbjct: 877 SGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFYEI 936
Query: 540 YASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSW 599
YASFSGQ YNDW+LSLYNVFFTSLPVIALGVFDQDVSAR CLKFPLLYQEGVQN+LFSW
Sbjct: 937 YASFSGQAAYNDWYLSLYNVFFTSLPVIALGVFDQDVSARLCLKFPLLYQEGVQNVLFSW 996
Query: 600 TRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMAL 659
RILGWA NGV +A IIFFFCI+AM+ QAFRK GEV LE+LG TMYTCVVWVVN QMAL
Sbjct: 997 KRILGWAFNGVLSATIIFFFCINAMENQAFRKAGEVADLEVLGATMYTCVVWVVNSQMAL 1056
Query: 660 SVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVL 719
S++YFTYIQHLFIWGGI FWYIFLL YG MDP +STTAYKV IEACAPAPS+WLITLLVL
Sbjct: 1057 SISYFTYIQHLFIWGGILFWYIFLLVYGTMDPSLSTTAYKVLIEACAPAPSYWLITLLVL 1116
Query: 720 MSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFE 779
++SLLPYF Y++IQMRFFP HQMIQW R+DGQT DPE+ +VRQRS+R TTVG+TARFE
Sbjct: 1117 VASLLPYFAYASIQMRFFPTFHQMIQWIRNDGQTTDPEYVNIVRQRSIRHTTVGFTARFE 1176
Query: 780 AS 781
AS
Sbjct: 1177 AS 1178
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356516900|ref|XP_003527130.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1359 bits (3518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 653/782 (83%), Positives = 712/782 (91%), Gaps = 1/782 (0%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MYYEE D+PA ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAG +YG+GVTEVE
Sbjct: 398 MYYEEADRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGIAYGQGVTEVE 457
Query: 61 RAMARRKGSPLEEEVTEEQE-DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAIC 119
RA+ARR+G PL +E+TE+ K+SIKGFNF DERIM G+W+NEPHADVIQ FLRLLA+C
Sbjct: 458 RALARREGVPLSQELTEDGNVPKSSIKGFNFMDERIMKGNWINEPHADVIQNFLRLLAVC 517
Query: 120 HTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVER 179
HTA+PEVDEE GK+SYEAESPDEAAFV+AARELGFEFYERTQT+IS+HE +P +G ER
Sbjct: 518 HTAIPEVDEEIGKVSYEAESPDEAAFVVAARELGFEFYERTQTNISLHEFNPRSGQTTER 577
Query: 180 SYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINE 239
SY LLN+LEFSS+RKRMSVIVR EEG LLL SKGADSVMFERLA NGREFEE+TK+HI+E
Sbjct: 578 SYKLLNILEFSSTRKRMSVIVRDEEGKLLLFSKGADSVMFERLARNGREFEEKTKQHIDE 637
Query: 240 YADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGAT 299
YADAGLRTLILAYRELDE+EY FNEEF EAKN VSADRE++ EEI+EKIEK+LILLGAT
Sbjct: 638 YADAGLRTLILAYRELDEEEYNLFNEEFMEAKNLVSADREQIVEEISEKIEKDLILLGAT 697
Query: 300 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE 359
AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM+Q+IISS+TPE
Sbjct: 698 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPE 757
Query: 360 SKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVK 419
+K+LEK EDKSAAAAA+K SV+HQL GKELL S+E+ LALIIDGKSLTYALEDDVK
Sbjct: 758 TKSLEKVEDKSAAAAAVKVSVIHQLTNGKELLAESDENSEALALIIDGKSLTYALEDDVK 817
Query: 420 DLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGI 479
DLFL LA GCASVICCRSSPKQKALVTRLVK KT STTLAIGDGANDVGMLQEADIG+GI
Sbjct: 818 DLFLTLAAGCASVICCRSSPKQKALVTRLVKVKTGSTTLAIGDGANDVGMLQEADIGIGI 877
Query: 480 SGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEA 539
SGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF+E
Sbjct: 878 SGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFYEI 937
Query: 540 YASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSW 599
YASFSGQ YNDW+LSLYNVFFTSLPVIALGVFDQDVSAR C KFPLLYQEGVQN+LFSW
Sbjct: 938 YASFSGQAAYNDWYLSLYNVFFTSLPVIALGVFDQDVSARLCHKFPLLYQEGVQNVLFSW 997
Query: 600 TRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMAL 659
RILGWA NGV +A IIFFFCI+ M+ QAFRK GEV LE+LG TMYTCVVWVVN QMAL
Sbjct: 998 KRILGWAFNGVLSATIIFFFCINGMENQAFRKAGEVADLEVLGATMYTCVVWVVNSQMAL 1057
Query: 660 SVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVL 719
S++YFTYIQHLFIWGGI FWYIFLL YG MDP +STTAYKV IEACAPAPS+WLITLLVL
Sbjct: 1058 SISYFTYIQHLFIWGGILFWYIFLLVYGTMDPSLSTTAYKVLIEACAPAPSYWLITLLVL 1117
Query: 720 MSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFE 779
++SLLPYF Y++IQMRFFP HQMIQW R+DGQT DPE+ +VRQRS+R TTVG+TARFE
Sbjct: 1118 VASLLPYFAYASIQMRFFPTFHQMIQWIRNDGQTTDPEYVNIVRQRSIRHTTVGFTARFE 1177
Query: 780 AS 781
AS
Sbjct: 1178 AS 1179
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356563129|ref|XP_003549818.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1352 bits (3499), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 630/783 (80%), Positives = 714/783 (91%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MYYEETDKPA ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAG +YGRGVTEVE
Sbjct: 397 MYYEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVE 456
Query: 61 RAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICH 120
RA++RR S +E+ + E K+SIKGFNF DER+MNG+W+ EP+A+VIQ FLRLLA+CH
Sbjct: 457 RALSRRHESHPGQELKKISESKSSIKGFNFMDERVMNGNWIKEPNANVIQNFLRLLAVCH 516
Query: 121 TALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERS 180
TA+PEVDEE GK+SYEAESPDEAAFVIAARELGFEFYERT T+IS+ ELD ++G K+ RS
Sbjct: 517 TAIPEVDEETGKVSYEAESPDEAAFVIAARELGFEFYERTHTTISLRELDTISGQKINRS 576
Query: 181 YSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEY 240
Y LLN+LEF+S+RKRMSVIV+ EEG LLLLSKGADSVMFE++A+NGR+FEE+TK+HI EY
Sbjct: 577 YKLLNILEFTSARKRMSVIVKDEEGKLLLLSKGADSVMFEQIAKNGRDFEEKTKQHIAEY 636
Query: 241 ADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATA 300
AD+GLRTLILAYREL+++EY +FN+EFTEAKN VS D+E++ E I + IEK+LILLGATA
Sbjct: 637 ADSGLRTLILAYRELNDEEYNKFNKEFTEAKNLVSEDQEQIVEGIIQNIEKDLILLGATA 696
Query: 301 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES 360
VEDKLQ+GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM+Q+IISS+TPE+
Sbjct: 697 VEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPET 756
Query: 361 KTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKD 420
K+LEK EDKSAA AA+K+SVL QL K LL +++E+ LALIIDGKSLTYALEDDVKD
Sbjct: 757 KSLEKMEDKSAAEAAIKSSVLRQLRESKALLSTADENYEALALIIDGKSLTYALEDDVKD 816
Query: 421 LFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS 480
LFLELAIGCASVICCRSSPKQKALVTRLVK +T STTLAIGDGANDVGMLQEADIG+GIS
Sbjct: 817 LFLELAIGCASVICCRSSPKQKALVTRLVKMRTGSTTLAIGDGANDVGMLQEADIGIGIS 876
Query: 481 GVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAY 540
GVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFE Y
Sbjct: 877 GVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEMY 936
Query: 541 ASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWT 600
ASFSGQ YNDWF+SLYNVFFTSLPVIALGVFDQDVS++ CLKFPLLYQEG QNILFSW
Sbjct: 937 ASFSGQAAYNDWFMSLYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGTQNILFSWK 996
Query: 601 RILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALS 660
RI+GWALNGV +AI+FFFCI +M+ QAFRKGGEV+GLE+LG TMYTCVVWVVNCQMALS
Sbjct: 997 RIIGWALNGVVTSAIVFFFCIRSMEYQAFRKGGEVMGLEVLGATMYTCVVWVVNCQMALS 1056
Query: 661 VTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLM 720
++YFTYIQH+FIWG I FWYIFLLAYGA+DP STTAYKVFIEA APAPSFW++T L+L+
Sbjct: 1057 ISYFTYIQHIFIWGSILFWYIFLLAYGAIDPSFSTTAYKVFIEALAPAPSFWIVTFLILI 1116
Query: 721 SSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEA 780
+SLLPYF Y++IQ+RFFP++HQMIQW R+D QT DPE+C +VRQRS+R TTVG+TAR EA
Sbjct: 1117 ASLLPYFVYASIQLRFFPMYHQMIQWMRNDRQTSDPEYCNVVRQRSIRHTTVGFTARLEA 1176
Query: 781 SSR 783
S R
Sbjct: 1177 SKR 1179
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513878|ref|XP_003525635.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1349 bits (3492), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 632/783 (80%), Positives = 714/783 (91%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MYYEETDKPA ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAG +YG+ VTEVE
Sbjct: 397 MYYEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGQRVTEVE 456
Query: 61 RAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICH 120
RA++ R S + + + E K+SIKGFNF DER+MNG+W+ EP+A+VIQ FL+LLA+CH
Sbjct: 457 RALSGRHESHPGQVLEKISESKSSIKGFNFMDERVMNGNWIKEPNANVIQNFLQLLAVCH 516
Query: 121 TALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERS 180
TA+PEVDEE GK+SYEAESPDEAAFVIAARELGFEFYERT T+IS+HELDP++G K+ RS
Sbjct: 517 TAIPEVDEETGKVSYEAESPDEAAFVIAARELGFEFYERTHTTISLHELDPISGQKINRS 576
Query: 181 YSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEY 240
Y LLN+LEF+S+RKRMSVIVR EG LLLLSKGADSVMFER+A+NGR+FEE+TK+HI+EY
Sbjct: 577 YKLLNILEFTSARKRMSVIVRDAEGKLLLLSKGADSVMFERIAKNGRDFEEKTKQHISEY 636
Query: 241 ADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATA 300
AD+GLRTLILAYREL+E+EY +F++EFTEAKN VS D+E++ E I + IEK+LILLGATA
Sbjct: 637 ADSGLRTLILAYRELNEEEYNKFSKEFTEAKNLVSEDQEQIVEGIVQNIEKDLILLGATA 696
Query: 301 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES 360
VEDKLQ+GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM+Q+IISS+TPE+
Sbjct: 697 VEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSDTPET 756
Query: 361 KTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKD 420
K+LEK EDKSAA AA+K+SVL QL K LL +S+E+ LALIIDGKSLTYALEDDVKD
Sbjct: 757 KSLEKMEDKSAAEAAIKSSVLRQLREAKALLSTSDENYEALALIIDGKSLTYALEDDVKD 816
Query: 421 LFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS 480
LFLELAIGCASVICCRSSPKQKALVTRLVK +T STTLAIGDGANDVGMLQEADIG+GIS
Sbjct: 817 LFLELAIGCASVICCRSSPKQKALVTRLVKMRTGSTTLAIGDGANDVGMLQEADIGIGIS 876
Query: 481 GVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAY 540
GVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFE Y
Sbjct: 877 GVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEIY 936
Query: 541 ASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWT 600
ASFSGQ YNDWF+SLYNVFFTSLPVIALGVFDQDVS++ CLKFPLLYQEGVQNILFSW
Sbjct: 937 ASFSGQAAYNDWFMSLYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGVQNILFSWK 996
Query: 601 RILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALS 660
RI+GWALNGV +AI+FFFCI +M+ QAFRKGGEV+GLE+LG TMYTCVVWVVNCQMALS
Sbjct: 997 RIIGWALNGVVTSAIVFFFCIRSMEYQAFRKGGEVMGLEVLGATMYTCVVWVVNCQMALS 1056
Query: 661 VTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLM 720
++YFTYIQH+FIWG I FWYIFLLAYGA+DP STTAYKVFIEA APAP FW+ITLL+L+
Sbjct: 1057 ISYFTYIQHIFIWGSILFWYIFLLAYGAIDPSFSTTAYKVFIEALAPAPFFWIITLLILI 1116
Query: 721 SSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTARFEA 780
+SLLPYF Y++IQMRFFP++HQMIQW R+D QT DPE+C +VRQRS+R TTVG+TAR EA
Sbjct: 1117 ASLLPYFIYASIQMRFFPMYHQMIQWMRNDRQTSDPEYCNVVRQRSIRHTTVGFTARLEA 1176
Query: 781 SSR 783
S R
Sbjct: 1177 SKR 1179
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225455798|ref|XP_002271424.1| PREDICTED: putative phospholipid-transporting ATPase 9-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1346 bits (3483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 645/796 (81%), Positives = 717/796 (90%), Gaps = 7/796 (0%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MYYEE DKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGT+YGRG+TEVE
Sbjct: 397 MYYEEGDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVE 456
Query: 61 RAMARRKGSPLEEEVTEEQ-------EDKASIKGFNFEDERIMNGSWVNEPHADVIQKFL 113
RA AR K +PL +EV E++ E K SIKG+NF DERI NG+WVNEP ADVIQ FL
Sbjct: 457 RAQARGKETPLAQEVVEDKDNVEEITETKPSIKGYNFIDERITNGNWVNEPRADVIQNFL 516
Query: 114 RLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVT 173
RLLA+CHTA+PEVD+E GKISYEAESPDEAAFVI ARELGFEFYERTQTSIS+HELDP++
Sbjct: 517 RLLAVCHTAIPEVDDETGKISYEAESPDEAAFVIGARELGFEFYERTQTSISLHELDPMS 576
Query: 174 GTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQT 233
G KV R+Y L+N++EFSS+RKRMSVIVR+EEG LLLLSKGADSVMFERLA++GREFE QT
Sbjct: 577 GRKVARTYKLMNIIEFSSARKRMSVIVRNEEGRLLLLSKGADSVMFERLAQDGREFEVQT 636
Query: 234 KEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNL 293
+ HINEYADAGLRTL+LAYRELD++EY +FNEEF++AKN VSADREE+ EE+AE+IEK+L
Sbjct: 637 RLHINEYADAGLRTLVLAYRELDDEEYNEFNEEFSQAKNLVSADREEIIEEVAERIEKDL 696
Query: 294 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVII 353
ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM+Q+II
Sbjct: 697 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIII 756
Query: 354 SSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYA 413
+SETP K LEK+ DKSA A KA+V+ Q+ GK LL+ ++E LALIIDGKSL YA
Sbjct: 757 NSETPGIKALEKAGDKSAVDEAAKANVIQQISEGKALLNIASEDSEALALIIDGKSLIYA 816
Query: 414 LEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEA 473
LEDDVKD+FLELAIGCASVICCRSSPKQKALVTRLVK KT STTLAIGDGANDVGMLQEA
Sbjct: 817 LEDDVKDMFLELAIGCASVICCRSSPKQKALVTRLVKVKTGSTTLAIGDGANDVGMLQEA 876
Query: 474 DIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFT 533
DIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFT
Sbjct: 877 DIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFT 936
Query: 534 LFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQ 593
LFFFEAYASFSGQ YNDW+LSLYNVFFTSLPVIA+GVFDQDV+ARFCLKFPLLYQEGVQ
Sbjct: 937 LFFFEAYASFSGQAAYNDWYLSLYNVFFTSLPVIAMGVFDQDVAARFCLKFPLLYQEGVQ 996
Query: 594 NILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVV 653
N+LFSWTRILGWA NGV ++ +IFFFC AM+ QAFRKGGEV+G+EI G MYTCVVWVV
Sbjct: 997 NVLFSWTRILGWAFNGVLSSTLIFFFCACAMEHQAFRKGGEVVGMEIFGAVMYTCVVWVV 1056
Query: 654 NCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWL 713
NCQMALS+ YFT IQH+FIWG I FWYIFLL YGAMDP ISTTAY+VFIEACAPA SFWL
Sbjct: 1057 NCQMALSINYFTLIQHVFIWGSIVFWYIFLLVYGAMDPNISTTAYQVFIEACAPALSFWL 1116
Query: 714 ITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVG 773
+TL V +++LLPYF+Y+AIQMRFFP++HQMIQW R+DG ++DPE+CQMVRQRSLR TTVG
Sbjct: 1117 VTLFVTVATLLPYFSYAAIQMRFFPMYHQMIQWIRNDGHSEDPEYCQMVRQRSLRSTTVG 1176
Query: 774 YTARFEASSRDLKAKL 789
YTARF S +L ++
Sbjct: 1177 YTARFSRSKLELPEQI 1192
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255541872|ref|XP_002512000.1| Phospholipid-transporting ATPase, putative [Ricinus communis] gi|223549180|gb|EEF50669.1| Phospholipid-transporting ATPase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1344 bits (3479), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 644/790 (81%), Positives = 704/790 (89%), Gaps = 7/790 (0%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MY+EE DKPARARTSNLNEELGQVDTILSDKTGTLTCNSME IK S+AGTSYGRG+TEVE
Sbjct: 397 MYFEEGDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMELIKFSVAGTSYGRGITEVE 456
Query: 61 RAMARRKGSPLEEE-------VTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFL 113
+AMARRKGSPL +E V E+ E S KG+NF DERI +G WVNEP ADVIQKFL
Sbjct: 457 KAMARRKGSPLPQEEIEGDTDVEEQTEQTISTKGYNFVDERISDGHWVNEPCADVIQKFL 516
Query: 114 RLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVT 173
RLLAICHTA+PE DEE G+ISYEAESPDEAAFVIAARELGFEF+ERTQ SIS+ ELDPVT
Sbjct: 517 RLLAICHTAIPESDEETGRISYEAESPDEAAFVIAARELGFEFFERTQASISLLELDPVT 576
Query: 174 GTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQT 233
G KV R Y LLNV+EF+SSRKRMSVIVR E G LLLL KGADS+MFERLA+NGREFE +T
Sbjct: 577 GQKVTRYYQLLNVIEFTSSRKRMSVIVRDEGGKLLLLCKGADSIMFERLAKNGREFEGKT 636
Query: 234 KEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNL 293
KEHI+EYADAGLRTL+LAYRELDE+EY +F++EF EAK+ +SADREE EE+A +IE++L
Sbjct: 637 KEHISEYADAGLRTLVLAYRELDEEEYNEFSQEFNEAKSLLSADREETIEEVAARIERDL 696
Query: 294 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVII 353
ILLGATAVEDKLQ GVPECIDKLAQAGIK+WVLTGDKMETAINIGFACSLLRQGM+QVII
Sbjct: 697 ILLGATAVEDKLQQGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQVII 756
Query: 354 SSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYA 413
SSET E+KTL+K EDK AA A KASVL Q+ GK LL +S+ESL LALIIDG SL YA
Sbjct: 757 SSETSENKTLQKMEDKDAADVASKASVLRQINEGKALLGASSESLEALALIIDGNSLAYA 816
Query: 414 LEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEA 473
L+DDVKD FLELAIGCASVICCRSSPKQKALVTRLVKTKT STTLAIGDGANDVGMLQEA
Sbjct: 817 LQDDVKDEFLELAIGCASVICCRSSPKQKALVTRLVKTKTGSTTLAIGDGANDVGMLQEA 876
Query: 474 DIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFT 533
DIGVGISGVEGMQA+MSSD AIAQFR+LERLLLVHGHWCYRRISSMICYFFYKNIAFGFT
Sbjct: 877 DIGVGISGVEGMQAIMSSDFAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNIAFGFT 936
Query: 534 LFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQ 593
LFF+EAYASFSGQ YNDWFLSLYNVFFTSLPVIALGVFDQDVSAR+CLKFPLLYQEGVQ
Sbjct: 937 LFFYEAYASFSGQAAYNDWFLSLYNVFFTSLPVIALGVFDQDVSARYCLKFPLLYQEGVQ 996
Query: 594 NILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVV 653
N+LFSW +I+GW NG+ +A +IFFFCI AM+ QAF KGG+V LEILG TMYTC+V VV
Sbjct: 997 NVLFSWQQIIGWVFNGILSATLIFFFCISAMENQAFYKGGKVADLEILGATMYTCIVCVV 1056
Query: 654 NCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWL 713
NCQMALS+ YFTYIQHLFIWGGI FWY+FLLAYGAMDPYISTTAYKVFIEACAPAPS+WL
Sbjct: 1057 NCQMALSINYFTYIQHLFIWGGIIFWYLFLLAYGAMDPYISTTAYKVFIEACAPAPSYWL 1116
Query: 714 ITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVG 773
IT VL+SSLLPYF YSAIQMRFFPL+HQMI W R+DGQT+DPE+C ++RQRSLR TTVG
Sbjct: 1117 ITFFVLISSLLPYFAYSAIQMRFFPLYHQMILWIRNDGQTEDPEYCNVIRQRSLRHTTVG 1176
Query: 774 YTARFEASSR 783
YTARF R
Sbjct: 1177 YTARFSKRER 1186
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449439369|ref|XP_004137458.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1312 bits (3395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/789 (78%), Positives = 696/789 (88%), Gaps = 6/789 (0%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MY+EETDKPA ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCS+ GT+YGRG+TEVE
Sbjct: 398 MYHEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVGGTAYGRGITEVE 457
Query: 61 RAMARRKGSPLEEEVTEEQE----DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLL 116
RA+ARRK S L + + +K +KGFNF+DER+M+G+WV EP A+VIQKFL+LL
Sbjct: 458 RALARRKESTLPQNFGADNARLSGEKTFVKGFNFKDERMMDGNWVKEPRANVIQKFLQLL 517
Query: 117 AICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTK 176
AICHTALPE+DEE GKISYEAESPDEAAFVIAARE GFEFYER+QTSIS+ E DP + K
Sbjct: 518 AICHTALPEIDEETGKISYEAESPDEAAFVIAAREFGFEFYERSQTSISLREFDPTSAKK 577
Query: 177 VERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEH 236
VERSY LL+VLEF+S+RKRMSVI+R +G LLLL KGADSVMFERLA+NG EFEEQTK H
Sbjct: 578 VERSYQLLDVLEFNSTRKRMSVIIRDSKGKLLLLCKGADSVMFERLAKNGNEFEEQTKVH 637
Query: 237 INEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILL 296
INEYADAGLRTL+LAYREL E+E+ F++EF +AKN+VS R+++ +++ E IEK+LILL
Sbjct: 638 INEYADAGLRTLVLAYRELKEEEFNAFHQEFIKAKNTVSTGRDDIIDQLTESIEKDLILL 697
Query: 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSE 356
GATAVEDKLQNGVPECIDKLAQAGIK+WVLTGDKMETAINIGFACSLLRQGM+Q+IISSE
Sbjct: 698 GATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIISSE 757
Query: 357 TPESKTLEKSED--KSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYAL 414
TPE K L+K ED KSAA A K SV+ Q+ K LL SS E+ LALIIDGKSLTYAL
Sbjct: 758 TPEGKALDKVEDVHKSAAIKAFKTSVIQQITDAKALLTSSTETPETLALIIDGKSLTYAL 817
Query: 415 EDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 474
EDDVKDLFLELAIGCASVICCRSSPKQKA VT++VK KT STTLA+GDGANDVGM+QEAD
Sbjct: 818 EDDVKDLFLELAIGCASVICCRSSPKQKAQVTQMVKVKTGSTTLAVGDGANDVGMIQEAD 877
Query: 475 IGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL 534
IG+GISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCYRRISSMICYFFYKNI FGFTL
Sbjct: 878 IGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNIVFGFTL 937
Query: 535 FFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQN 594
FFFE YASFSGQ VYNDWFLSLYNVFFTSLPVIALGVFDQDVS+R+CLKF LLYQEGVQN
Sbjct: 938 FFFEMYASFSGQTVYNDWFLSLYNVFFTSLPVIALGVFDQDVSSRYCLKFSLLYQEGVQN 997
Query: 595 ILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVN 654
+LFSW RI GW NG+ ++ IIFFFC+ AM QAFR GEV+GLEILG TMYTCVVWVVN
Sbjct: 998 VLFSWVRIFGWVFNGLLSSVIIFFFCVGAMDYQAFRNSGEVVGLEILGVTMYTCVVWVVN 1057
Query: 655 CQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLI 714
CQMALS++YFTYIQHLFIWG I WY+FL+AYGA++P ISTTA++VFIEACAPAPSFW++
Sbjct: 1058 CQMALSISYFTYIQHLFIWGSIVLWYLFLMAYGAINPTISTTAFQVFIEACAPAPSFWIL 1117
Query: 715 TLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGY 774
TLL L +SLLPYF + +IQMRFFP++HQMIQW ++DGQ +DPE+CQ+VRQRSLR TTVGY
Sbjct: 1118 TLLALGASLLPYFVFGSIQMRFFPMYHQMIQWIKADGQLNDPEYCQVVRQRSLRHTTVGY 1177
Query: 775 TARFEASSR 783
TARFEAS
Sbjct: 1178 TARFEASKH 1186
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449439677|ref|XP_004137612.1| PREDICTED: putative phospholipid-transporting ATPase 9-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1309 bits (3387), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/787 (77%), Positives = 697/787 (88%), Gaps = 6/787 (0%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MY+EETDKPA ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCS+ GT+YGRG+TEVE
Sbjct: 398 MYHEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVGGTAYGRGITEVE 457
Query: 61 RAMARRKGSPLEEEVTEEQE----DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLL 116
RA+ARRK S L + + +K +KGFNF+DER+M+G+WV EP A+VIQKFL+LL
Sbjct: 458 RALARRKESTLPQNFGADNARLSGEKTFVKGFNFKDERMMDGNWVKEPRANVIQKFLQLL 517
Query: 117 AICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTK 176
AICHTALPE+DE+ GKISYEAESPDEAAFVIAARE GFEFYER+QTSIS+ E DP + K
Sbjct: 518 AICHTALPEIDEKTGKISYEAESPDEAAFVIAAREFGFEFYERSQTSISLREFDPTSAKK 577
Query: 177 VERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEH 236
VERSY LL+VLEF+S+RKRMSVI+R +G LLLL KGADSVMFERLA+N EFEEQTK H
Sbjct: 578 VERSYQLLDVLEFNSTRKRMSVIIRDSKGKLLLLCKGADSVMFERLAKNRCEFEEQTKVH 637
Query: 237 INEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILL 296
+NEYADAGLRTL+LAYREL E+E+ F++EF +AKN+VS DR+++ +++ E +EK+LILL
Sbjct: 638 VNEYADAGLRTLVLAYRELKEEEFNSFHQEFIKAKNTVSTDRDDIIDQLTESVEKDLILL 697
Query: 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSE 356
GATAVEDKLQNGVPECIDKLAQAGIK+WVLTGDKMETAINIGFACSLLRQGM+Q+IISSE
Sbjct: 698 GATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIISSE 757
Query: 357 TPESKTLEKSED--KSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYAL 414
TPE K L+K ED KSAA A K SV+ Q+ K LL SS+E+ LALIIDGKSLTYAL
Sbjct: 758 TPEGKALDKVEDVHKSAAIKAFKTSVIQQITDAKALLTSSSETPETLALIIDGKSLTYAL 817
Query: 415 EDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 474
EDDVKDLFLELAIGCASVICCRSSPKQKA VT++VK KT STTLA+GDGANDVGM+QEAD
Sbjct: 818 EDDVKDLFLELAIGCASVICCRSSPKQKAQVTQMVKVKTGSTTLAVGDGANDVGMIQEAD 877
Query: 475 IGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL 534
IG+GISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCYRRISSMICYFFYKNI FGFTL
Sbjct: 878 IGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNIVFGFTL 937
Query: 535 FFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQN 594
FFFE YASFSGQ VYNDWFLSLYNVFFTSLPVIALGVFDQDVS+R+CLKF LLYQEGVQN
Sbjct: 938 FFFEMYASFSGQTVYNDWFLSLYNVFFTSLPVIALGVFDQDVSSRYCLKFSLLYQEGVQN 997
Query: 595 ILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVN 654
+LFSW RI GW NG+ ++ IIFFFC+ AM QAFR GEV+GLEILG TMYTCVVWVVN
Sbjct: 998 VLFSWVRIFGWVFNGLLSSVIIFFFCVGAMDYQAFRNSGEVVGLEILGVTMYTCVVWVVN 1057
Query: 655 CQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLI 714
CQMALS++YFTYIQHLFIWG I WY+FL+AYGA++P ISTTA++VFIEACAPAPSFW++
Sbjct: 1058 CQMALSISYFTYIQHLFIWGSIVLWYLFLMAYGAINPTISTTAFQVFIEACAPAPSFWIL 1117
Query: 715 TLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGY 774
TLL L +SLLPYF + +IQMRFFP++HQMIQW ++DGQ +DPE+CQ+VRQRSLR TTVGY
Sbjct: 1118 TLLALGASLLPYFVFGSIQMRFFPMYHQMIQWIKADGQLNDPEYCQVVRQRSLRHTTVGY 1177
Query: 775 TARFEAS 781
TARFEAS
Sbjct: 1178 TARFEAS 1184
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449486875|ref|XP_004157428.1| PREDICTED: LOW QUALITY PROTEIN: putative phospholipid-transporting ATPase 9-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1307 bits (3383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/787 (78%), Positives = 696/787 (88%), Gaps = 6/787 (0%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MY+EETDKPA ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCS+ GT+YGRG+TEVE
Sbjct: 398 MYHEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVGGTAYGRGITEVE 457
Query: 61 RAMARRKGSPLEEEVTEEQE----DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLL 116
RA+ARRK S L + + +K +KGFNF+DER+M+G+WV EP A+VIQKFL+LL
Sbjct: 458 RALARRKESTLPQNFGADNARLSGEKXFVKGFNFKDERMMDGNWVKEPRANVIQKFLQLL 517
Query: 117 AICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTK 176
AICHTALPE+DEE GKISYEAESPDEAAFVIAARE GFEFYER+QTSIS+ E DP + K
Sbjct: 518 AICHTALPEIDEETGKISYEAESPDEAAFVIAAREFGFEFYERSQTSISLREFDPTSAKK 577
Query: 177 VERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEH 236
VERSY LL+VLEF+S+RKRMSVI+R + G LLLL KGADSVMFERLA+N EFEEQTK H
Sbjct: 578 VERSYQLLDVLEFNSTRKRMSVIIRDQRGKLLLLCKGADSVMFERLAKNRCEFEEQTKVH 637
Query: 237 INEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILL 296
+NEYADAGLRTL+LAYREL E+E+ F++EF +AKN+VS DR+++ +++ E +EK+LILL
Sbjct: 638 VNEYADAGLRTLVLAYRELKEEEFNSFHQEFIKAKNTVSTDRDDIIDQLTESVEKDLILL 697
Query: 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSE 356
GATAVEDKLQNGVPECIDKLAQAGIK+WVLTGDKMETAINIGFACSLLRQGM+Q+IISSE
Sbjct: 698 GATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIISSE 757
Query: 357 TPESKTLEKSED--KSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYAL 414
TPE K L+K ED KSAA A K SV Q+ K LL SS+E+ LALIIDGKSLTYAL
Sbjct: 758 TPEGKALDKVEDDHKSAAIKAFKTSVTQQITDAKALLTSSSETPETLALIIDGKSLTYAL 817
Query: 415 EDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 474
EDDVKDLFLELAIGCASVICCRSSPKQKA VT++VK KT STTLA+GDGANDVGM+QEAD
Sbjct: 818 EDDVKDLFLELAIGCASVICCRSSPKQKAQVTQMVKVKTGSTTLAVGDGANDVGMIQEAD 877
Query: 475 IGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL 534
IG+GISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCYRRISSMICYFFYKNI FGFTL
Sbjct: 878 IGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNIVFGFTL 937
Query: 535 FFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQN 594
FFFE YASFSGQ VYNDWFLSLYNVFFTSLPVIALGVFDQDVS+R+CLKF LLYQEGVQN
Sbjct: 938 FFFEMYASFSGQTVYNDWFLSLYNVFFTSLPVIALGVFDQDVSSRYCLKFSLLYQEGVQN 997
Query: 595 ILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVN 654
+LFSW RI GW NG+ ++ IIFFFC+ AM QAFR GEV+GLEILG TMYTCVVWVVN
Sbjct: 998 VLFSWVRIXGWVFNGLLSSVIIFFFCVGAMDYQAFRNSGEVVGLEILGVTMYTCVVWVVN 1057
Query: 655 CQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLI 714
CQMALS++YFTYIQHLFIWG I WY+FL+AYGA++P ISTTA++VFIEACAPAPSFW++
Sbjct: 1058 CQMALSISYFTYIQHLFIWGSIVLWYLFLMAYGAINPTISTTAFQVFIEACAPAPSFWIL 1117
Query: 715 TLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGY 774
TLL L +SLLPYF + +IQMRFFP++HQMIQW ++DGQ +DPE+CQ+VRQRSLR TTVGY
Sbjct: 1118 TLLALGASLLPYFVFGSIQMRFFPMYHQMIQWIKADGQLNDPEYCQVVRQRSLRHTTVGY 1177
Query: 775 TARFEAS 781
TARFEAS
Sbjct: 1178 TARFEAS 1184
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 793 | ||||||
| TAIR|locus:2026900 | 1200 | AT1G68710 [Arabidopsis thalian | 0.988 | 0.653 | 0.703 | 2.5e-303 | |
| TAIR|locus:2102345 | 1202 | AT3G25610 [Arabidopsis thalian | 0.998 | 0.658 | 0.703 | 8.4e-303 | |
| TAIR|locus:2031860 | 1203 | ACA.l "autoinhibited Ca2+/ATPa | 0.998 | 0.658 | 0.691 | 1.2e-296 | |
| TAIR|locus:2088217 | 1243 | AT3G13900 [Arabidopsis thalian | 0.882 | 0.563 | 0.555 | 4.7e-240 | |
| TAIR|locus:2030180 | 1228 | AT1G72700 [Arabidopsis thalian | 0.883 | 0.570 | 0.562 | 6.1e-240 | |
| TAIR|locus:2007858 | 1216 | AT1G17500 [Arabidopsis thalian | 0.982 | 0.640 | 0.556 | 3.7e-238 | |
| TAIR|locus:2020038 | 1240 | AT1G54280 [Arabidopsis thalian | 0.926 | 0.592 | 0.521 | 1.5e-234 | |
| TAIR|locus:2025961 | 1213 | ALA3 "aminophospholipid ATPase | 0.960 | 0.628 | 0.450 | 4.4e-171 | |
| DICTYBASE|DDB_G0269380 | 1313 | DDB_G0269380 "P-type ATPase" [ | 0.540 | 0.326 | 0.405 | 4e-158 | |
| POMBASE|SPBC887.12 | 1258 | SPBC887.12 "P-type ATPase (pre | 0.557 | 0.351 | 0.400 | 7.5e-152 |
| TAIR|locus:2026900 AT1G68710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2911 (1029.8 bits), Expect = 2.5e-303, P = 2.5e-303
Identities = 560/796 (70%), Positives = 636/796 (79%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MYYEE DKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCS+AGT+YGRGVTEVE
Sbjct: 401 MYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVE 460
Query: 61 RAMARRKGSPL-----EEEVTEEQEDKA-----SIKGFNFEDERIMNGSWVNEPHADVIQ 110
AM RRKG PL E ++ E +A ++KGFNF DERIMNG+WV E HADVIQ
Sbjct: 461 MAMGRRKGGPLVFQSDENDIDMEYSKEAITEESTVKGFNFRDERIMNGNWVTETHADVIQ 520
Query: 111 KFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELD 170
KF RLLA+CHT +PEVDE+ KISYEAESPDEAAFVIAARELGFEF+ RTQT+ISV ELD
Sbjct: 521 KFFRLLAVCHTVIPEVDEDTEKISYEAESPDEAAFVIAARELGFEFFNRTQTTISVRELD 580
Query: 171 PVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFE 230
V+G +VER Y +LNVLEF+S+RKRMSVIV+ E+G LLLL KGAD+VMFERL++NGREFE
Sbjct: 581 LVSGKRVERLYKVLNVLEFNSTRKRMSVIVQEEDGKLLLLCKGADNVMFERLSKNGREFE 640
Query: 231 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXX 290
E+T++H+NEYADAGLRTLILAYRELDEKEYK FNE +EAK+SVSADR
Sbjct: 641 EETRDHVNEYADAGLRTLILAYRELDEKEYKVFNERISEAKSSVSADRESLIEEVTEKIE 700
Query: 291 XXXXXXGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQ 350
GATAVEDKLQNGVP+CIDKLAQAGIK+WVLTGDKMETAINIGFACSLLRQ M+Q
Sbjct: 701 KDLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQDMKQ 760
Query: 351 VIISSETPESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELLDSSNESLGPLALIIDGKSL 410
+II+ ETPE ++ VL Q+I GK L S + ALIIDGKSL
Sbjct: 761 IIINLETPEIQSLEKTGEKDVIAKASKENVLSQIINGKTQLKYSGGNA--FALIIDGKSL 818
Query: 411 TYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 470
YAL+DD+K +FLELA+ CASVICCRSSPKQKALVTRLVK+ TTLAIGDGANDVGML
Sbjct: 819 AYALDDDIKHIFLELAVSCASVICCRSSPKQKALVTRLVKSGNGKTTLAIGDGANDVGML 878
Query: 471 QEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAF 530
QEADIGVGISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCYRRIS+MICYFFYKNI F
Sbjct: 879 QEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISTMICYFFYKNITF 938
Query: 531 GFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQE 590
GFTLF +E Y +FS P YNDWFLSLYNVFF+SLPVIALGVFDQDVSAR+CLKFPLLYQE
Sbjct: 939 GFTLFLYETYTTFSSTPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPLLYQE 998
Query: 591 GVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVV 650
GVQN+LFSW RILGW NG +A IIFF C +++ QAF G+ G EILG TMYTC+V
Sbjct: 999 GVQNVLFSWRRILGWMFNGFYSAVIIFFLCKSSLQSQAFNHDGKTPGREILGGTMYTCIV 1058
Query: 651 WVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPS 710
WVVN QMAL+++YFT IQH+ IW I WY F+ YG + IST AYKVF+EA AP+ S
Sbjct: 1059 WVVNLQMALAISYFTLIQHIVIWSSIVVWYFFITVYGELPSRISTGAYKVFVEALAPSLS 1118
Query: 711 FWXXXXXXXXXXXXPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPT 770
+W PYF YSA+QM FFP++H MIQW R +GQ +DPE+C +VRQRS+RPT
Sbjct: 1119 YWLITLFVVVATLMPYFIYSALQMSFFPMYHGMIQWLRYEGQCNDPEYCDIVRQRSIRPT 1178
Query: 771 TVGYTARFEASSRDLK 786
TVG+TAR EA R ++
Sbjct: 1179 TVGFTARLEAKKRSVR 1194
|
|
| TAIR|locus:2102345 AT3G25610 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2906 (1028.0 bits), Expect = 8.4e-303, P = 8.4e-303
Identities = 560/796 (70%), Positives = 635/796 (79%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MYYEETDKPA+ARTSNLNEELG VDTILSDKTGTLTCNSMEFIKCSIAG +YGRG+TEVE
Sbjct: 401 MYYEETDKPAQARTSNLNEELGMVDTILSDKTGTLTCNSMEFIKCSIAGKAYGRGITEVE 460
Query: 61 RAMARRKG-SPLEEEVTEEQEDKAS--IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLA 117
RAMA R G SPL E + D++ +KGFNFEDER+MNG+WV +P A V+QKF RLLA
Sbjct: 461 RAMAVRSGGSPLVNEDLDVVVDQSGPKVKGFNFEDERVMNGNWVRQPEAAVLQKFFRLLA 520
Query: 118 ICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKV 177
+CHTA+PE DEE+G +SYEAESPDEAAFV+AARE GFEF+ RTQ IS ELD V+G KV
Sbjct: 521 VCHTAIPETDEESGNVSYEAESPDEAAFVVAAREFGFEFFNRTQNGISFRELDLVSGEKV 580
Query: 178 ERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHI 237
ER Y LLNVLEF+S+RKRMSVIVR ++G LLLLSKGAD+VMFERLA+NGR+FE +T+EH+
Sbjct: 581 ERVYRLLNVLEFNSTRKRMSVIVRDDDGKLLLLSKGADNVMFERLAKNGRQFEAKTQEHV 640
Query: 238 NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXG 297
N+YADAGLRTL+LAYRE+DE EY +FN+ F EAK SVS DR G
Sbjct: 641 NQYADAGLRTLVLAYREVDENEYIEFNKSFNEAKASVSEDREALIDEITDKMERDLILLG 700
Query: 298 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET 357
ATAVEDKLQNGVPECIDKLAQAGIK+WVLTGDKMETAINIGFA SLLRQ M+Q+II+ ET
Sbjct: 701 ATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFASSLLRQEMKQIIINLET 760
Query: 358 PESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDD 417
P+ K+ V+ QL GK LL +S S ALIIDGKSLTYALED+
Sbjct: 761 PQIKSLEKSGGKDEIELASRESVVMQLQEGKALLAASGASSEAFALIIDGKSLTYALEDE 820
Query: 418 VKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGV 477
+K +FL+LA CASVICCRSSPKQKALVTRLVK+ T TTLAIGDGANDVGMLQEADIGV
Sbjct: 821 IKKMFLDLATSCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGV 880
Query: 478 GISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFF 537
GISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCY RI+SMICYFFYKNI FG T+F +
Sbjct: 881 GISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRIASMICYFFYKNITFGVTVFLY 940
Query: 538 EAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILF 597
EAY SFSGQP YNDWFLSL+NVFF+SLPVIALGVFDQDVSARFC KFPLLYQEGVQNILF
Sbjct: 941 EAYTSFSGQPAYNDWFLSLFNVFFSSLPVIALGVFDQDVSARFCYKFPLLYQEGVQNILF 1000
Query: 598 SWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQM 657
SW RI+GW NG +A IFF C ++K Q F G+ G EILG TMYTCVVWVVN QM
Sbjct: 1001 SWKRIIGWMFNGFISALAIFFLCKESLKHQLFDPDGKTAGREILGGTMYTCVVWVVNLQM 1060
Query: 658 ALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWXXXXX 717
ALS++YFT++QH+ IWG I FWYIFL+ YGAM P ST AY VF+EA APAPS+W
Sbjct: 1061 ALSISYFTWVQHIVIWGSIAFWYIFLMIYGAMTPSFSTDAYMVFLEALAPAPSYWLTTLF 1120
Query: 718 XXXXXXXPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYTAR 777
PYF Y ++QMRFFP +HQMIQW R +G ++DPEF +MVRQRS+RPTTVGYTAR
Sbjct: 1121 VMIFALIPYFVYKSVQMRFFPKYHQMIQWIRYEGHSNDPEFVEMVRQRSIRPTTVGYTAR 1180
Query: 778 FEASSRDLKAKLEDSL 793
AS R A+ D +
Sbjct: 1181 RAASVRR-SARFHDQI 1195
|
|
| TAIR|locus:2031860 ACA.l "autoinhibited Ca2+/ATPase II" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2848 (1007.6 bits), Expect = 1.2e-296, P = 1.2e-296
Identities = 552/798 (69%), Positives = 627/798 (78%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MYYEE DKPA ARTSNLNEELG VDTILSDKTGTLTCNSMEFIKCSIAGT+YGRG+TEVE
Sbjct: 400 MYYEENDKPAHARTSNLNEELGMVDTILSDKTGTLTCNSMEFIKCSIAGTAYGRGITEVE 459
Query: 61 RAMARRK-GSPLEEEVTEEQEDKAS--IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLA 117
R+MA R GS L + + D++ IKGFNF DER+M G+WV + A V+QKF RLLA
Sbjct: 460 RSMAMRSNGSSLVGDDLDVVVDQSGPKIKGFNFLDERVMKGNWVKQRDAAVLQKFFRLLA 519
Query: 118 ICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKV 177
+CHTA+PE DE G +SYEAESPDEAAFV+AARE GFEF+ RTQ IS ELD +G V
Sbjct: 520 VCHTAIPETDEATGSVSYEAESPDEAAFVVAAREFGFEFFSRTQNGISFRELDLASGKTV 579
Query: 178 ERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHI 237
ER Y LLNVLEF+S+RKRMSVIVR E+G LLLLSKGAD+VMFERLA+NGR+FEE+T+EH+
Sbjct: 580 ERVYRLLNVLEFNSARKRMSVIVRDEDGRLLLLSKGADNVMFERLAKNGRKFEEKTREHV 639
Query: 238 NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXG 297
NEYADAGLRTLILAYRE+DE EY +F++ F EAKNSV+ADR G
Sbjct: 640 NEYADAGLRTLILAYREVDENEYIEFSKNFNEAKNSVTADRESLIDEITEQMERDLILLG 699
Query: 298 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET 357
ATAVEDKLQNGVP+CIDKLAQAGIK+WVLTGDKMETAINIGFACSLLRQ M+Q+II+ ET
Sbjct: 700 ATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQEMKQIIINLET 759
Query: 358 PESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELL--DSSNESLGPLALIIDGKSLTYALE 415
P K V++Q+ GK LL SS S ALIIDGKSLTYALE
Sbjct: 760 PHIKALEKAGEKDAIEHASRESVVNQMEEGKALLTASSSASSHEAFALIIDGKSLTYALE 819
Query: 416 DDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADI 475
DD K FL+LA GCASVICCRSSPKQKALVTRLVK+ T TTLAIGDGANDVGMLQEADI
Sbjct: 820 DDFKKKFLDLATGCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADI 879
Query: 476 GVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 535
GVGISGVEGMQAVMSSDIAIAQFR+LERLLLVHGHWCY RISSMICYFFYKNI FG T+F
Sbjct: 880 GVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYSRISSMICYFFYKNITFGVTVF 939
Query: 536 FFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNI 595
+EAY SFS QP YNDWFLSL+NVFF+SLPVIALGVFDQDVSAR+C KFPLLYQEGVQN+
Sbjct: 940 LYEAYTSFSAQPAYNDWFLSLFNVFFSSLPVIALGVFDQDVSARYCYKFPLLYQEGVQNL 999
Query: 596 LFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNC 655
LFSW RI+GW NGV A IFF C ++K Q + G+ G EILG TMYTCVVWVVN
Sbjct: 1000 LFSWKRIIGWMFNGVFTALAIFFLCKESLKHQLYNPNGKTAGREILGGTMYTCVVWVVNL 1059
Query: 656 QMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWXXX 715
QMAL+++YFT++QH+ IWG + FWYIFL+ YGA+ P ST AYKVFIEA APAPS+W
Sbjct: 1060 QMALAISYFTWLQHIVIWGSVAFWYIFLMIYGAITPSFSTDAYKVFIEALAPAPSYWLTT 1119
Query: 716 XXXXXXXXXPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRPTTVGYT 775
P+F + ++QMRFFP +HQMIQW R +G ++DPEF +MVRQRS+RPTTVG+T
Sbjct: 1120 LFVMFFALIPFFVFKSVQMRFFPGYHQMIQWIRYEGHSNDPEFVEMVRQRSIRPTTVGFT 1179
Query: 776 ARFEASSRDLKAKLEDSL 793
AR AS R + D L
Sbjct: 1180 ARRAASVRR-SGRFHDQL 1196
|
|
| TAIR|locus:2088217 AT3G13900 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2070 (733.7 bits), Expect = 4.7e-240, Sum P(2) = 4.7e-240
Identities = 399/718 (55%), Positives = 503/718 (70%)
Query: 78 EQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEA 137
+Q IKGF+FED+R+M G+W+NEP++D I FLR+LA+CHTA+PEVDE+ GK +YEA
Sbjct: 511 DQTQSTGIKGFSFEDQRLMGGNWLNEPNSDDILMFLRILAVCHTAIPEVDEDTGKCTYEA 570
Query: 138 ESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMS 197
ESPDE AF++AA E GFEF +RTQ+S+ + E +G VER Y +LNVL+F+S RKRMS
Sbjct: 571 ESPDEVAFLVAAGEFGFEFTKRTQSSVFISERH--SGQPVEREYKVLNVLDFTSKRKRMS 628
Query: 198 VIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDE 257
VIVR E+G +LLL KGADS++FERL++NG+ + E T +H+N Y +AGLRTL L+YR+LDE
Sbjct: 629 VIVRDEKGQILLLCKGADSIIFERLSKNGKNYLEATSKHLNGYGEAGLRTLALSYRKLDE 688
Query: 258 KEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLA 317
EY +N EF +AK SV ADR GATAVEDKLQ GVP+CIDKLA
Sbjct: 689 TEYSIWNSEFHKAKTSVGADRDEMLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDKLA 748
Query: 318 QAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXX 377
QAG+K+WVLTGDKMETAINIG+ACSLLRQGM+Q+ I+ E +
Sbjct: 749 QAGLKIWVLTGDKMETAINIGYACSLLRQGMKQIYIALRNEEGSSQDPEAAAREN----- 803
Query: 378 XXVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS 437
+L Q+I +++ + ALIIDGK+LTYALEDD+K FL LA+ CASVICCR
Sbjct: 804 --ILMQIINASQMIKLEKDPHAAFALIIDGKTLTYALEDDIKYQFLALAVDCASVICCRV 861
Query: 438 SPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497
SPKQKALVTRL K T TTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQ
Sbjct: 862 SPKQKALVTRLAKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQ 921
Query: 498 FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLY 557
FRFLERLL+VHGHWCY+RI+ MICYFFYKNI FG TLF+FEA+ FSGQ +YND +L L+
Sbjct: 922 FRFLERLLVVHGHWCYKRIAQMICYFFYKNITFGLTLFYFEAFTGFSGQAIYNDSYLLLF 981
Query: 558 NVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIF 617
NV TSLPVIALGVF+QDVS+ CL+FP LYQ+G +N+ F W RI+GW NGV + +IF
Sbjct: 982 NVILTSLPVIALGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRIIGWMANGVYASVVIF 1041
Query: 618 FFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGIT 677
I Q+F GG+ ++ +GT M+TC++W VN Q+AL++++FT+IQH+ IWG I
Sbjct: 1042 SLNIGIFHVQSFCSGGQTADMDAMGTAMFTCIIWAVNVQIALTMSHFTWIQHVLIWGSIV 1101
Query: 678 FWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWXXXXXXXXXXXXPYFTYSAIQMRFF 737
WYIFL +G + P +S + + E APAP FW PY Y + Q
Sbjct: 1102 TWYIFLALFGMLPPKVSGNIFHMLSETLAPAPIFWLTSLLVIAATTLPYLAYISFQRSLN 1161
Query: 738 PLHHQMIQ---WFRSDGQTDDPEFCQMVRQRSL--RPTTVGYTARFEASSRDLKAKLE 790
PL H +IQ FR D Q + C R+RS T +G TAR +A R L+ +L+
Sbjct: 1162 PLDHHIIQEIKHFRIDVQDE----CMWTRERSKAREKTKIGVTARVDAKIRQLRGRLQ 1215
|
|
| TAIR|locus:2030180 AT1G72700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2081 (737.6 bits), Expect = 6.1e-240, Sum P(2) = 6.1e-240
Identities = 399/709 (56%), Positives = 503/709 (70%)
Query: 82 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 141
+A IKGF FED R+MNG+W+ E + I +F R+LAICHTA+PE++EE GK +YEAESPD
Sbjct: 506 RAPIKGFGFEDNRLMNGNWLRESQPNDILQFFRILAICHTAIPELNEETGKYTYEAESPD 565
Query: 142 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 201
EA+F+ AARE GFEF++RTQ+S+ + E +G +ER Y +LN+LEF+S RKRM+VIVR
Sbjct: 566 EASFLAAAREFGFEFFKRTQSSVFIRERFSGSGQIIEREYKVLNLLEFTSKRKRMTVIVR 625
Query: 202 SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYK 261
EEG +LLL KGADS++FERLA+NG+ + T H+ EY +AGLRTL LAYR+LDE EY
Sbjct: 626 DEEGQILLLCKGADSIIFERLAKNGKTYLGPTTRHLTEYGEAGLRTLALAYRKLDEDEYA 685
Query: 262 QFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLAQAGI 321
+N EF +AK S+ +DR GATAVEDKLQ GVP+CIDKLAQAG+
Sbjct: 686 AWNSEFLKAKTSIGSDRDELLETGADMIEKELILIGATAVEDKLQKGVPQCIDKLAQAGL 745
Query: 322 KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXXXXVL 381
KLWVLTGDKMETAINIGFACSLLRQGMRQ+ I+S E + +L
Sbjct: 746 KLWVLTGDKMETAINIGFACSLLRQGMRQICITSMNSEGGSQDSKRVVKEN-------IL 798
Query: 382 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQ 441
+QL + +++ + ALIIDGK+LTYALEDD+K FL LA+ CASVICCR SPKQ
Sbjct: 799 NQLTKAVQMVKLEKDPHAAFALIIDGKTLTYALEDDMKYQFLALAVDCASVICCRVSPKQ 858
Query: 442 KALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFL 501
KALV RLVK T TTLAIGDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQFRFL
Sbjct: 859 KALVVRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFL 918
Query: 502 ERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFF 561
ERLL+VHGHWCY+RI+ MICYFFYKNIAFG TLF+FEA+ FSGQ VYND++L L+NV
Sbjct: 919 ERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYNDYYLLLFNVVL 978
Query: 562 TSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCI 621
TSLPVIALGVF+QDVS+ CL+FP LYQ+G +N+ F W+RILGW NGV + +IFF I
Sbjct: 979 TSLPVIALGVFEQDVSSEICLQFPALYQQGTKNLFFDWSRILGWMCNGVYASLVIFFLNI 1038
Query: 622 HAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYI 681
+ QAFR G+ ++ +GTTM+TC++W N Q+AL++++FT+IQH+ IWG I WY+
Sbjct: 1039 GIIYSQAFRDNGQTADMDAVGTTMFTCIIWAANVQIALTMSHFTWIQHVLIWGSIGMWYL 1098
Query: 682 FLLAYGAMDPYISTTAYKVFIEACAPAPSFWXXXXXXXXXXXXPYFTYSAIQMRFFPLHH 741
F+ Y M P S Y++ E APAP +W PY + A Q PL H
Sbjct: 1099 FVAIYSMMPPSYSGNIYRILDEILAPAPIYWMATLLVTVAAVLPYVAHIAFQRFLNPLDH 1158
Query: 742 QMIQWFRSDGQT-DDPEFCQMVRQRSLRPTTVGYTARFEASSRDLKAKL 789
+IQ + G+ +D R ++ T +G+TAR +A R L++KL
Sbjct: 1159 HIIQEIKYYGRDIEDARLWTRERTKAREKTKIGFTARVDAKIRHLRSKL 1207
|
|
| TAIR|locus:2007858 AT1G17500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2296 (813.3 bits), Expect = 3.7e-238, P = 3.7e-238
Identities = 451/810 (55%), Positives = 574/810 (70%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MY E+ PA ARTSNLNEELGQVDTILSDKTGTLTCN M+F+KCSIAGTSYG +EVE
Sbjct: 396 MYDSESGVPAHARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVE 455
Query: 61 RAMARRKGSPLEE--EVTE------------EQEDKAS----IKGFNFEDERIMNGSWVN 102
A A++ L+E EV+ E E + IKGF FED R+M+G+W+
Sbjct: 456 VAAAQQMAVDLDEHGEVSSRTSTPRAQARDIEVESSITPRIPIKGFGFEDIRLMDGNWLR 515
Query: 103 EPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQT 162
EPH D I F R+LAICHTA+PE++EE GK +YEAESPDEA+F+ AA E GF F++RTQ+
Sbjct: 516 EPHTDDILLFFRILAICHTAIPELNEETGKYTYEAESPDEASFLTAASEFGFVFFKRTQS 575
Query: 163 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERL 222
S+ VHE +G +ER Y +LN+L+F+S RKRMSV+VR EEG +LLL KGADS++FERL
Sbjct: 576 SVYVHERLSHSGQTIEREYKVLNLLDFTSKRKRMSVVVRDEEGQILLLCKGADSIIFERL 635
Query: 223 AENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXX 282
A+NG+ + T +H+NEY +AGLRTL L+YR+LDE+EY +N EF +AK S+ +DR
Sbjct: 636 AKNGKVYLGPTTKHLNEYGEAGLRTLALSYRKLDEEEYSAWNAEFHKAKTSIGSDRDELL 695
Query: 283 XXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACS 342
GATAVEDKLQ GVP+CIDKLAQAG+KLWVLTGDKMETAINIG++CS
Sbjct: 696 ERISDMIEKDLILVGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGYSCS 755
Query: 343 LLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELLDSSNESLGPLA 402
LLRQGM+Q+ I+ E + +L+Q+ + +++ + A
Sbjct: 756 LLRQGMKQICITVVNSEGASQDAKAVKDN--------ILNQITKAVQMVKLEKDPHAAFA 807
Query: 403 LIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 462
LIIDGK+LTYALED++K FL LA+ CASVICCR SPKQKALVTRLVK T TLAIGD
Sbjct: 808 LIIDGKTLTYALEDEMKYQFLALAVDCASVICCRVSPKQKALVTRLVKEGTGKITLAIGD 867
Query: 463 GANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICY 522
GANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQFRFLERLL+VHGHWCY+RI+ MICY
Sbjct: 868 GANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICY 927
Query: 523 FFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCL 582
FFYKNIAFG TLF+FEA+ FSGQ VYND++L L+NV TSLPVIALGVF+QDVS+ CL
Sbjct: 928 FFYKNIAFGLTLFYFEAFTGFSGQSVYNDYYLLLFNVVLTSLPVIALGVFEQDVSSEICL 987
Query: 583 KFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILG 642
+FP LYQ+G +N+ F W RILGW NGV ++ +IFF I + +QAFR G+ ++ +G
Sbjct: 988 QFPALYQQGKKNLFFDWYRILGWMGNGVYSSLVIFFLNIGIIYEQAFRVSGQTADMDAVG 1047
Query: 643 TTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFI 702
TTM+TC++W VN Q+AL+V++FT+IQH+ IWG I WY+F+ YG M P +S Y++ +
Sbjct: 1048 TTMFTCIIWAVNVQIALTVSHFTWIQHVLIWGSIGLWYLFVALYGMMPPSLSGNIYRILV 1107
Query: 703 EACAPAPSFWXXXXXXXXXXXXPYFTYSAIQMRFFPLHHQMIQ---WFRSDGQTDDPEFC 759
E APAP +W PYF + + Q PL H +IQ +++ D +D
Sbjct: 1108 EILAPAPIYWIATFLVTVTTVLPYFAHISFQRFLHPLDHHIIQEIKYYKRD--VEDRRMW 1165
Query: 760 QMVRQRSLRPTTVGYTARFEASSRDLKAKL 789
R ++ T +G+TAR +A R L++KL
Sbjct: 1166 TRERTKAREKTKIGFTARVDAKIRHLRSKL 1195
|
|
| TAIR|locus:2020038 AT1G54280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2024 (717.5 bits), Expect = 1.5e-234, Sum P(2) = 1.5e-234
Identities = 393/753 (52%), Positives = 511/753 (67%)
Query: 47 IAGTSYGRGVTEVERAMARRKGSPLEEE--VT----EEQEDKASIKGFNFEDERIMNGSW 100
+A S +G T+ +A + S E E VT ++Q+ +KGF+FED R+MN +W
Sbjct: 474 VANLSMNKGRTQRYAKLASKTSSDFELETVVTASDEKDQKQNTGVKGFSFEDNRLMNENW 533
Query: 101 VNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERT 160
+NEP++D I F R+LA+CHTA+PEVDE+ G +YEAESPDE AF++A+RE GFEF +RT
Sbjct: 534 LNEPNSDDILMFFRILAVCHTAIPEVDEDTGMCTYEAESPDEVAFLVASREFGFEFTKRT 593
Query: 161 QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFE 220
Q+S+ + E +G V+R Y +LN+L+F+S RKRMS IVR EEG +LLL KGADS++FE
Sbjct: 594 QSSVFIAERFSSSGQPVDREYKILNLLDFTSKRKRMSAIVRDEEGQILLLCKGADSIIFE 653
Query: 221 RLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXX 280
RL+++G+E+ T +H+N Y +AGLRTL L YR+LDE EY +N EF +AK SV ADR
Sbjct: 654 RLSKSGKEYLGATSKHLNVYGEAGLRTLALGYRKLDETEYAAWNSEFHKAKTSVGADRDE 713
Query: 281 XXXXXXXXXXXXXXXXGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 340
GATAVEDKLQ GVP+CID LAQAG+K+WVLTGDKMETAINIG+A
Sbjct: 714 MLEKVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGYA 773
Query: 341 CSLLRQGMRQVIISSETPESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELLDSSNESLGP 400
CSLLRQGM+Q+ IS E + +L Q+ +++ +
Sbjct: 774 CSLLRQGMKQISISLTNVEESSQNSEAAAKES-------ILMQITNASQMIKIEKDPHAA 826
Query: 401 LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAI 460
ALIIDGK+LTYAL+DDVK FL LA+ CASVICCR SPKQKALVTRL K T TTLAI
Sbjct: 827 FALIIDGKTLTYALKDDVKYQFLALAVDCASVICCRVSPKQKALVTRLAKEGTGKTTLAI 886
Query: 461 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMI 520
GDGANDVGM+QEADIGVGISGVEGMQAVM+SD +IAQFRFLERLL+VHGHWCY+RI+ MI
Sbjct: 887 GDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMI 946
Query: 521 CYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARF 580
CYFFYKNI FG TLF+FE + FSGQ +YND +L L+NV TSLPVI+LGVF+QDV +
Sbjct: 947 CYFFYKNITFGLTLFYFECFTGFSGQSIYNDSYLLLFNVVLTSLPVISLGVFEQDVPSDV 1006
Query: 581 CLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEI 640
CL+FP LYQ+G +N+ F W RILGW NGV + +IF + Q+FR G+ +
Sbjct: 1007 CLQFPALYQQGPKNLFFDWYRILGWMGNGVYASIVIFTLNLGIFHVQSFRSDGQTADMNA 1066
Query: 641 LGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKV 700
+GT M+TC++W VN Q+AL++++FT+IQH+ IWG I WY+FL YG + +S + +
Sbjct: 1067 MGTAMFTCIIWAVNVQIALTMSHFTWIQHVMIWGSIGAWYVFLALYGMLPVKLSGNIFHM 1126
Query: 701 FIEACAPAPSFWXXXXXXXXXXXXPYFTYSAIQMRFFPLHHQMIQ---WFRSDGQTDDPE 757
+E APAP FW PY + + Q PL H +IQ FR D +D
Sbjct: 1127 LVEILAPAPIFWLTSLLVIAATTLPYLFHISYQRSVNPLDHHIIQEIKHFRID--VEDER 1184
Query: 758 FCQMVRQRSLRPTTVGYTARFEASSRDLKAKLE 790
+ + ++ T +G+TAR +A R L+ +L+
Sbjct: 1185 MWKREKSKAREKTKIGFTARVDAKIRQLRGRLQ 1217
|
|
| TAIR|locus:2025961 ALA3 "aminophospholipid ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1663 (590.5 bits), Expect = 4.4e-171, P = 4.4e-171
Identities = 349/775 (45%), Positives = 472/775 (60%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MY+ ET+ PA ARTSNLNEELGQV+ I SDKTGTLT N MEF KCSI G SYG GVTE+E
Sbjct: 384 MYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSYGCGVTEIE 443
Query: 61 RAMARRKGSPLEEEVTEEQEDKASI--KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAI 118
+ +A+R G +V EEQ +I KGFNF+D R+M G+W NEP+ D+ ++ R LAI
Sbjct: 444 KGIAQRHGL----KVQEEQRSTGAIREKGFNFDDPRLMRGAWRNEPNPDLCKELFRCLAI 499
Query: 119 CHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVE 178
CHT LPE DE KI Y+A SPDEAA V AA+ GF FY RT T + V E K++
Sbjct: 500 CHTVLPEGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTMVYVRESHVEKMGKIQ 559
Query: 179 R-SYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHI 237
+Y +LNVLEF+S+RKR SV+ R +G L+L KGAD+V+FERLA + + T+EH+
Sbjct: 560 DVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERLANGMDDVRKVTREHL 619
Query: 238 NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRXXXXXXXXXXXXXXXXXXG 297
+ +GLRTL LAY++L+ + Y +NE+F +AK+++ DR G
Sbjct: 620 EHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALR-DREKKLDEVAELIEKDLILIG 678
Query: 298 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET 357
+TA+EDKLQ GVP CI+ L++AGIK+WVLTGDKMETAINI +AC+L+ M+Q +ISSET
Sbjct: 679 STAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFVISSET 738
Query: 358 PESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELLDSSNESL-GP-LALIIDGKSLTYALE 415
+ V +L + E S ++ GP L+L+IDGK L YAL+
Sbjct: 739 DAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVAGPKLSLVIDGKCLMYALD 798
Query: 416 DDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADI 475
++ + L L++ C SV+CCR SP QKA VT LV+ TL+IGDGANDV M+Q A +
Sbjct: 799 PSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIGDGANDVSMIQAAHV 858
Query: 476 GVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 535
G+GISG+EGMQAVM+SD AIAQFRFL LLLVHG W Y RI ++ YFFYKN+ F T F
Sbjct: 859 GIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVMYFFYKNLTFTLTQF 918
Query: 536 FFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNI 595
+F FSGQ Y+DWF SL+NV FT+LPVI LG+F++DVSA ++P LY+EG++N
Sbjct: 919 WFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKDVSASLSKRYPELYREGIRNS 978
Query: 596 LFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNC 655
F W + WA + V + + + F + A G+V GL + T ++TC+V VN
Sbjct: 979 FFKWRVVAVWATSAVYQSLVCYLF-VTTSSFGAVNSSGKVFGLWDVSTMVFTCLVIAVNV 1037
Query: 656 QMALSVTYFTYIQHLFIWGGITFWYIFLLAY-GAMDPYISTTAYKVFIEACAPAPSFWXX 714
++ L T ++ + G I W +F Y G M P+ I F+
Sbjct: 1038 RILLMSNSITRWHYITVGGSILAWLVFAFVYCGIMTPHDRNENVYFVIYVLMSTFYFYFT 1097
Query: 715 XXXXXXXXXXPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDDPEFCQMVRQRSLRP 769
F + ++ FFP +Q++Q ++D + Q+ + L P
Sbjct: 1098 LLLVPIVSLLGDFIFQGVERWFFPYDYQIVQEIHRH-ESDASKADQLEVENELTP 1151
|
|
| DICTYBASE|DDB_G0269380 DDB_G0269380 "P-type ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 865 (309.6 bits), Expect = 4.0e-158, Sum P(2) = 4.0e-158
Identities = 185/456 (40%), Positives = 261/456 (57%)
Query: 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSE 356
G+TA+EDKLQ GVP+ I L +A IK+WVLTGDK ETAINIGF+C LL MR +I++
Sbjct: 796 GSTAIEDKLQEGVPQAIANLIKANIKIWVLTGDKQETAINIGFSCHLLTSDMRIIILNGS 855
Query: 357 TPESKTXXXXXXXXXXXXXXXXXVLHQLIRGK-ELL---DSSNESLGPLALIIDGKSLTY 412
E +H I+G + D+ N AL+++G L +
Sbjct: 856 NQED--------------------VHNQIQGAIDAYFSDDAENHQNSGFALVVEGSCLNF 895
Query: 413 ALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQE 472
ALE ++K +FLELA C SVICCR++P QKA V ++V+ + TLAIGDGANDV M+Q
Sbjct: 896 ALEGELKSVFLELAANCKSVICCRTTPLQKAQVVKMVRDTLRAVTLAIGDGANDVSMIQA 955
Query: 473 ADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGF 532
A IG+GISG EGMQAVM+SD +IAQF FL RLL+VHG W Y+R S ++ Y FYKN+ F
Sbjct: 956 AHIGIGISGHEGMQAVMASDYSIAQFSFLYRLLVVHGRWDYKRNSKLMLYCFYKNMVFAM 1015
Query: 533 TLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGV 592
T F+F Y SFS Q +++ W +S++NV FT LP+I +FDQDVSA K+P LY G
Sbjct: 1016 TQFWFGIYNSFSAQTMFDSWSISIFNVVFTGLPIIVCAIFDQDVSAESSQKYPQLYASGQ 1075
Query: 593 QNILFSWTRILGWALNGVANAAIIFFFCIHAMKQ-QAFRKGGEVIGLEILGTTMYTCVVW 651
++ F+ + W + ++ +IFF + G+ + L +G ++ VV
Sbjct: 1076 KDSEFNLRVLWVWIVEAWIHSVVIFFGVYGLYSHGSTLLESGDTLDLWAMGQNIFILVVI 1135
Query: 652 VVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACA--PAP 709
VN ++A Y+T+I H IW I W+ ++ A+ ST++ ++ A +P
Sbjct: 1136 TVNFKLAFETRYWTWITHFSIWASILIWFAWVAVLAAIPGIGSTSSGDIYYVAYKIFASP 1195
Query: 710 SFWXXXXXXXXXXXXPYFTYSAIQMRFFPLHHQMIQ 745
SFW P Y IQ P ++Q++Q
Sbjct: 1196 SFWLSIAVLPTICLAPDVIYKYIQRDVKPYNYQIVQ 1231
|
|
| POMBASE|SPBC887.12 SPBC887.12 "P-type ATPase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 831 (297.6 bits), Expect = 7.5e-152, Sum P(3) = 7.5e-152
Identities = 184/459 (40%), Positives = 254/459 (55%)
Query: 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSE 356
GATA+ED+LQ+GVP+ I L AGIK+WVLTGD+ ETAINIG +C L+ + M VI++ E
Sbjct: 760 GATAIEDRLQDGVPDTISTLQTAGIKIWVLTGDRQETAINIGMSCKLIDEDMGLVIVNEE 819
Query: 357 TPESKTXXXXXXXXXXXXXXXXXVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALED 416
T E+ L + R E + ES+ AL+IDG SLTYAL+
Sbjct: 820 TKEATAESVMAK------------LSSIYRN-EATTGNVESM---ALVIDGVSLTYALDF 863
Query: 417 DVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIG 476
++ F ELA C +VICCR SP QKAL+ ++VK T LAIGDGANDV M+Q A +G
Sbjct: 864 SLERRFFELASLCRAVICCRVSPLQKALIVKMVKRNTGEVLLAIGDGANDVPMIQAAHVG 923
Query: 477 VGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF 536
VGISG+EG+QAV SSD +I+QF +L++LLLVHG WCY+R+S +I Y FYKNIA T F+
Sbjct: 924 VGISGMEGLQAVRSSDFSISQFCYLKKLLLVHGSWCYQRLSKLILYSFYKNIALYMTQFW 983
Query: 537 FEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNIL 596
+ +FSGQ ++ W +SLYNV FT LP + +G+FDQ VSA ++P LYQ G ++
Sbjct: 984 YAFCNAFSGQVIFESWSISLYNVLFTVLPPVVIGIFDQFVSAGQLFQYPQLYQLGQRSEF 1043
Query: 597 FSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQ 656
F+ R W NG ++ ++F I K G G + GTT+Y ++ V +
Sbjct: 1044 FNLKRFWSWITNGFYHSLLLFLCSIAVFYYDGPNKDGLASGHWVWGTTLYAAILATVLGK 1103
Query: 657 MALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYIS-TTAYKVFIEACAPAPSFWXXX 715
AL ++T + G W +F+ Y P I + Y I FW
Sbjct: 1104 AALISNHWTQYTVIATLGSFLLWIVFMPIYAVAAPAIGFSKEYYGIIPHLYGNLKFWASL 1163
Query: 716 XXXXXXXXXPYFTYSAIQMRFFPLHHQMIQWFRSDGQTD 754
F + ++P + +Q + TD
Sbjct: 1164 LVLPTIALMRDFVWKYSSRMYYPEEYHYVQEIQKYNVTD 1202
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9SX33 | ALA9_ARATH | 3, ., 6, ., 3, ., 1 | 0.7337 | 0.9836 | 0.65 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| gw1.XII.101.1 | aminophospholipid ATPase (1183 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 793 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 1e-163 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-102 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 9e-30 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 6e-28 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 9e-18 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 2e-16 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-12 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 2e-12 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 4e-11 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 9e-11 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 3e-07 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 4e-07 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 4e-07 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 4e-04 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 0.001 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.003 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 0.004 | |
| COG1818 | 175 | COG1818, COG1818, Predicted RNA-binding protein, c | 0.004 | |
| PRK00192 | 273 | PRK00192, PRK00192, mannosyl-3-phosphoglycerate ph | 0.004 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 0.004 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 989 bits (2559), Expect = 0.0
Identities = 380/746 (50%), Positives = 502/746 (67%), Gaps = 26/746 (3%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MY+E+TD PA RTSNLNEELGQV+ I SDKTGTLT N MEF KCSIAG SYG G TE++
Sbjct: 336 MYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIK 395
Query: 61 RAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICH 120
+ R GS +E E + E KGF F D R+++ N+P+A I +F LA+CH
Sbjct: 396 DGIRERLGSYVENENSMLVE----SKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCH 451
Query: 121 TALPEV-DEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVER 179
T +PE D+ +I+Y+A SPDEAA V AAR++GF F+ERT SIS+ + G +
Sbjct: 452 TVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLI--EMHG--ETK 507
Query: 180 SYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINE 239
Y +LNVLEF+S RKRMSVIVR+ +G + LL KGAD+V+F+RL+ G + E+TKEH+
Sbjct: 508 EYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLEN 567
Query: 240 YADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGAT 299
YA GLRTL +AYREL E+EY+++NEE+ EA ++ DREE + +AE IEK+LILLGAT
Sbjct: 568 YASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL-TDREEKLDVVAESIEKDLILLGAT 626
Query: 300 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE 359
A+EDKLQ GVPE I+ L QAGIK+WVLTGDK+ETAINIG++C LL + M Q++I+S++ +
Sbjct: 627 AIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLD 686
Query: 360 SKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVK 419
+ ++ K L+ + L DS N +AL+IDGKSL YAL+++++
Sbjct: 687 ATRSVEAAIKFG----LEGTSEEFN----NLGDSGN-----VALVIDGKSLGYALDEELE 733
Query: 420 DLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGI 479
FL+LA+ C +VICCR SP QKA V RLVK T TTLAIGDGANDV M+QEAD+GVGI
Sbjct: 734 KEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793
Query: 480 SGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEA 539
SG EGMQAVM+SD AI QFRFL +LLLVHG W Y+RIS MI YFFYKN+ F F++
Sbjct: 794 SGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSF 853
Query: 540 YASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSW 599
Y FSGQ +Y W++ LYNVFFT+LPVI+LGVFDQDVSA L++P LY+EG + FS
Sbjct: 854 YNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFST 913
Query: 600 TRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVWVVNCQMAL 659
GW L+G+ + +IFFF + A F G V +G ++T +V +VN ++AL
Sbjct: 914 KTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSVDDFSSVGVIVFTALVVIVNLKIAL 973
Query: 660 SVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVL 719
+ + +I + IWG I W IF++ Y + A+ FWL+ L+++
Sbjct: 974 EINRWNWISLITIWGSILVWLIFVIVYS---SIFPSPAFYKAAPRVMGTFGFWLVLLVIV 1030
Query: 720 MSSLLPYFTYSAIQMRFFPLHHQMIQ 745
+ SLLP FTY AIQ F P + ++Q
Sbjct: 1031 LISLLPRFTYKAIQRLFRPPDYDIVQ 1056
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 502 bits (1295), Expect = e-163
Identities = 285/751 (37%), Positives = 415/751 (55%), Gaps = 49/751 (6%)
Query: 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVE 60
MY E ++ + R N+NE+LGQ+ + SDKTGTLT N MEF SI G Y G T +
Sbjct: 430 MYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQ 489
Query: 61 RAMARRKGSPLEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICH 120
A ++ ++ K +K + + + E A + F LA C+
Sbjct: 490 NDHAGYSVE-VDGKILRP---KMKVK-VDPQLLELSKSGKDTE-EAKHVHDFFLALAACN 543
Query: 121 TALPEVDEENGK-----ISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGT 175
T +P V ++ + Y+ ESPDE A V AA GF ERT S H + + G
Sbjct: 544 TIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERT----SGHIVIDIHGE 599
Query: 176 KVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN-GREFEEQTK 234
+ + +++L + EF S RKRMSVI+ + T+ + KGAD+ MF + + T+
Sbjct: 600 R--QRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATE 657
Query: 235 EHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLI 294
H++ Y+ GLRTL++ REL++ E++Q++ F EA ++ R L ++A +E NL
Sbjct: 658 AHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSF-EAASTALIGRAALLRKVASNVENNLT 716
Query: 295 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIIS 354
+LGA+A+EDKLQ GVPE I+ L AGIK+WVLTGDK ETAI+IG++ LL M Q+II+
Sbjct: 717 ILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIIN 776
Query: 355 SETPES--KTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTY 412
S + ES K+LE A + K + + + + SS + P+ALIIDG SL Y
Sbjct: 777 SNSKESCRKSLE-----DALVMSKKLTTVSGISQNTGG--SSAAASDPVALIIDGTSLVY 829
Query: 413 ALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQE 472
L+ ++++ +LA C+ V+CCR +P QKA + LVK +TS TLAIGDGANDV M+Q
Sbjct: 830 VLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQM 889
Query: 473 ADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGF 532
AD+GVGISG EG QAVM+SD A+ QFRFL LLLVHGHW Y+R+ MI Y FY+N F
Sbjct: 890 ADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVL 949
Query: 533 TLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLY---- 588
LF++ + F+ N+W LY+V +T+LP I +G+ D+D+S R LK+P LY
Sbjct: 950 VLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQ 1009
Query: 589 -QEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYT 647
QE + LF T I + + +A++FF + F I +G
Sbjct: 1010 RQEAYNSKLFWLTMI-----DTLWQSAVVFFVPL-------FAYWASTIDGSSIGDLWTL 1057
Query: 648 CVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAP 707
VV +VN +A+ + + +I H IWG I +I ++ +D + Y A
Sbjct: 1058 AVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVI---VIDAIPTLPGYWAIFHI-AK 1113
Query: 708 APSFWLITLLVLMSSLLPYFTYSAIQMRFFP 738
SFWL L +++++LLP F + F P
Sbjct: 1114 TGSFWLCLLAIVVAALLPRFVVKVLYQYFTP 1144
|
Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 334 bits (859), Expect = e-102
Identities = 187/744 (25%), Positives = 273/744 (36%), Gaps = 185/744 (24%)
Query: 13 RTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLE 72
R+ N E LG VD I SDKTGTLT N M K I G
Sbjct: 337 RSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGG--------------------- 375
Query: 73 EEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGK 132
+ D +K FL A+C++ PE +
Sbjct: 376 -----KDIDDKDLKDSPALLR------------------FLLAAALCNSVTPEKNGW--- 409
Query: 133 ISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSS 192
Y+A P E A V A +LGF +E Y +L + F S
Sbjct: 410 --YQAGDPTEGALVEFAEKLGFSLDLS----------------GLEVEYPILAEIPFDSE 451
Query: 193 RKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFE------EQTKEHINEYADAGLR 246
RKRMSVIV+++EG +L KGA V+ ER G +E + E A GLR
Sbjct: 452 RKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLR 511
Query: 247 TLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQ 306
L +AY++LD E ++ ++IE +L+ LG T +ED +
Sbjct: 512 VLAVAYKKLDRAE----------------------KDDEVDEIESDLVFLGLTGIEDPPR 549
Query: 307 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKS 366
V E I++L +AGIK+W++TGD +ETAI I C + +
Sbjct: 550 EDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAE------------------ 591
Query: 367 EDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELA 426
AL+IDG L ++++ +L EL+
Sbjct: 592 ----------------------------------SALVIDGAELDALSDEELAELVEELS 617
Query: 427 IGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQ 486
+ R SP+QKA + ++ K+ GDG ND L+ AD+G+ + G EG
Sbjct: 618 V------FARVSPEQKARIVEALQ-KSGHVVAMTGDGVNDAPALKAADVGIAMGG-EGTD 669
Query: 487 AVMSSD--IAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFS 544
A + + + L +V G Y I I Y KN+ TL
Sbjct: 670 AAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLI--YSLFNL 727
Query: 545 GQPVYNDWFLSLYNVFFTSLPVIALGVFD--QDVSARFCLKFPLLYQEGVQNILFSWTRI 602
L N+ SLP +ALGV D DV +K P G + LF+
Sbjct: 728 FFLPLTPLQLLWINLLTDSLPALALGVEDPESDV-----MKRP---PRGPEEGLFNRKIF 779
Query: 603 LGWALNGVANAAIIFF--FCIHAMKQQAFRKGGEVIGLEILGTTMYTCVVW--VVNCQMA 658
+ L +AI+F F ++ + A G + +L TT +T +V ++
Sbjct: 780 WRFILIIGLLSAILFILTFLLYLLGFIANTLGL-DLFQALLQTTAFTVLVLIQLLLTLAV 838
Query: 659 LSVTYFTYIQHLF----IWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSF-WL 713
S LF +W + I L ++ K+F P F WL
Sbjct: 839 RSRGRPFLSSLLFSNKYLWLALLVIIILQLLI----IFLPPLNLKIFQ--PTPLSLFEWL 892
Query: 714 ITLLVLMSSLLPYFTYSAIQMRFF 737
I + V + LL Y S +
Sbjct: 893 IAIAV--ALLLLYIVVSELYKLKS 914
|
Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 9e-30
Identities = 108/470 (22%), Positives = 176/470 (37%), Gaps = 91/470 (19%)
Query: 22 GQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQED 81
G++D DKTGTLT + ++ RGV + K + E +
Sbjct: 446 GKIDVCCFDKTGTLTEDGLDL-----------RGVQGLSGNQEFLK---IVTEDSSL--- 488
Query: 82 KASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPD 141
+ LA CH +L ++ GK+ +
Sbjct: 489 --------------------------KPSITHKALATCH-SLTKL---EGKLVGDPLDKK 518
Query: 142 EAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVR 201
E E E T V DP + S++ +FSS+ +RMSVIV
Sbjct: 519 MFEATGWTLEEDDESAEPTSILAVVRTDDP------PQELSIIRRFQFSSALQRMSVIVS 572
Query: 202 -SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEY 260
++E + KGA + + +E + Y G R L LAY+EL +
Sbjct: 573 TNDERSPDAFVKGAPETIQSLC--SPETVPSDYQEVLKSYTREGYRVLALAYKELPKLTL 630
Query: 261 KQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAG 320
++ + R+ + E NL LG E+ L+ E I +L +A
Sbjct: 631 QKAQD----------LSRDAV--------ESNLTFLGFIVFENPLKPDTKEVIKELKRAS 672
Query: 321 IKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES------KTLEKSEDKSAAAA 374
I+ ++TGD TA+++ C ++ ++ +E PES K A+
Sbjct: 673 IRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFAST- 731
Query: 375 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVIC 434
V G++ ++ S LA + GK+ L+ +L L L +
Sbjct: 732 ----QVEIPYPLGQDSVEDLLASRYHLA--MSGKAF-AVLQAHSPELLLRLLSHTT--VF 782
Query: 435 CRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG 484
R +P QK + L++ K T GDGAND G L++AD+G+ +S E
Sbjct: 783 ARMAPDQKETLVELLQ-KLDYTVGMCGDGANDCGALKQADVGISLSEAEA 831
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 118 bits (299), Expect = 6e-28
Identities = 56/216 (25%), Positives = 81/216 (37%), Gaps = 61/216 (28%)
Query: 128 EENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVL 187
+Y + P E A + +A +G + Y +L+V
Sbjct: 274 LVACDNNYLSGDPMEKALLKSAELVGKADKGNKE-------------------YKILDVF 314
Query: 188 EFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRT 247
FSS KRMSVIV + +G+ LL KGA + ER +E E A GLR
Sbjct: 315 PFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERC--------NNYEEKYLELARQGLRV 366
Query: 248 LILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQN 307
L A +EL++ +L LG ED L+
Sbjct: 367 LAFASKELED----------------------------------DLEFLGLITFEDPLRP 392
Query: 308 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343
E I++L AGIK+ ++TGD + TA I +
Sbjct: 393 DAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGI 428
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 9e-18
Identities = 125/527 (23%), Positives = 189/527 (35%), Gaps = 123/527 (23%)
Query: 19 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 78
E LG I SDKTGTLT N M K S + E
Sbjct: 284 ETLGCTTVICSDKTGTLTTNQMSVCKVVALDPS--------------------SSSLNEF 323
Query: 79 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 138
+ + E I + V +++ + A+C+ + +D K YE
Sbjct: 324 CVTGTT---YAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDS--SLDFNERKGVYEKV 378
Query: 139 S-PDEAAFVIAARELGFEFYERTQTSISVHELD--PVTGTKVERSYSLLNVLEFSSSRKR 195
EAA + ++G + +S L V K ++ L LEFS RK
Sbjct: 379 GEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKK----LATLEFSRDRKS 434
Query: 196 MSVIVRSEEGTLLLLSKGADSVMFER----LAENGR------EFEEQTKEHINEYADA-G 244
MSV+ + G L KGA + ER L +GR + + I E
Sbjct: 435 MSVLCKPSTGNKLF-VKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKA 493
Query: 245 LRTLILAYRE-LDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVED 303
LR L LA+++ D +E + A A IE +L +G + D
Sbjct: 494 LRCLALAFKDIPDPREED---------------LLSDPANFEA--IESDLTFIGVVGMLD 536
Query: 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTL 363
+ V + I+K AGI++ ++TGD ETA I C R++ I S
Sbjct: 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAI---C-------RRIGIFSPD------ 580
Query: 364 EKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFL 423
E KS G+E + +GP
Sbjct: 581 EDVTFKS--------------FTGREF-----DEMGPAK--------------------- 600
Query: 424 ELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGI-SGV 482
+ A ++V+ R P K+ + L++ + + GDG ND L++ADIG+ + SG
Sbjct: 601 QRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMT-GDGVNDAPALKKADIGIAMGSGT 659
Query: 483 EGMQAVMSSDIAIAQFRFLERLLLVH-GHWCYRRISSMICYFFYKNI 528
E A +SD+ +A F + V G Y + I Y NI
Sbjct: 660 E--VAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNI 704
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 84.1 bits (208), Expect = 2e-16
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 37/201 (18%)
Query: 177 VERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVM----FERLAENG--REFE 230
V ++ + F+S RK MSV+V+ G KGA ++ +RL NG
Sbjct: 468 VRAEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPIS 527
Query: 231 EQ----TKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIA 286
+ + I A LRT+ LAYR+ +E R++
Sbjct: 528 DDDKDRCADVIEPLASDALRTICLAYRDFAPEE----------------FPRKDYPN--- 568
Query: 287 EKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ 346
K L L+G ++D L+ GV E + + +AGI + ++TGD ++TA I C +L
Sbjct: 569 ----KGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF 624
Query: 347 GMRQVIISSETPESKTLEKSE 367
G ++ E E ++L E
Sbjct: 625 G----GLAMEGKEFRSLVYEE 641
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 1e-12
Identities = 28/89 (31%), Positives = 37/89 (41%)
Query: 7 DKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARR 66
K R N EELG+VD + SDKTGTLT N M I G + V
Sbjct: 223 KKGILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNSSSLVACDNNYL 282
Query: 67 KGSPLEEEVTEEQEDKASIKGFNFEDERI 95
G P+E+ + + E N E + +
Sbjct: 283 SGDPMEKALLKSAELVGKADKGNKEYKIL 311
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 2e-12
Identities = 96/481 (19%), Positives = 162/481 (33%), Gaps = 177/481 (36%)
Query: 19 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 78
E LG V+ I SDKTGTLT N M K +
Sbjct: 319 ETLGSVNVICSDKTGTLTKNHMTVTKIWTSDG---------------------------- 350
Query: 79 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 138
+ N E I++G ++ + + + L +C+ N K EA+
Sbjct: 351 LHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCN---------NAKFRNEAD 401
Query: 139 S----PDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 194
+ P + A + + G + + +T I V E+ FSS RK
Sbjct: 402 TLLGNPTDVALIELLMKFGLD--DLRETYIRVAEV------------------PFSSERK 441
Query: 195 RMSV-IVRSEEGTLLLLSKGADSVMFERLAE--------NGR--EFEEQTKEHINE---- 239
M+V V ++ + + KGA +E++ + +G+ +Q ++ I E
Sbjct: 442 WMAVKCVHRQDRSEMCFMKGA----YEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAE 497
Query: 240 YADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKN-LILLGA 298
A AGLR + A EK L LG
Sbjct: 498 MASAGLRVIAFAS-----------------------------------GPEKGQLTFLGL 522
Query: 299 TAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETP 358
+ D + GV E + L G+++ ++TGD ETA++I R++ + S+T
Sbjct: 523 VGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA----------RRLGMPSKTS 572
Query: 359 ESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDV 418
+S + G++L ++ L +
Sbjct: 573 QSVS------------------------GEKLDAMDDQQL-----------------SQI 591
Query: 419 KDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVG 478
+ R+SP+ K + + ++ K GDG ND L+ ADIGV
Sbjct: 592 VP---------KVAVFARASPEHKMKIVKALQ-KRGDVVAMTGDGVNDAPALKLADIGVA 641
Query: 479 I 479
+
Sbjct: 642 M 642
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 4e-11
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 22/107 (20%)
Query: 117 AICHTALPEVDEENGKISYEAE-SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGT 175
A+C+ A + E K E P E+A ++ A +LG I V EL
Sbjct: 1 ALCNDA--KFGENEEKNGGEIIGDPTESALLVFAEKLG----------IDVEEL------ 42
Query: 176 KVERSYSLLNVLEFSSSRKRMSVIVRSE-EGTLLLLSKGADSVMFER 221
Y + + F+S RKRMS + + E + L KGA + ER
Sbjct: 43 --RARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 9e-11
Identities = 131/596 (21%), Positives = 210/596 (35%), Gaps = 127/596 (21%)
Query: 19 EELGQVDTILSDKTGTLTCNSM--------EFIKCSIAGTSYGRGVTEVERAMARRKGSP 70
E LG V+ I SDKTGT+T M F SI + E + R SP
Sbjct: 354 EALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRF-SP 412
Query: 71 LEEEVTEEQEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEEN 130
E E D+ +K F + + + D+ K L A+ + A D+
Sbjct: 413 YEYSHNEAA-DQDILKEFK---DELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDAT 468
Query: 131 GKISYEAESPDEAAFVIAARELGFEFY------------ERTQTSISVHELDPVTGTKVE 178
+ P E A + A++ E Q+S+S H P +
Sbjct: 469 DCWKAHGD-PTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSA---- 523
Query: 179 RSYSLLNVLEFSSSRKRMSVIVRSEEG-TLLLLSKGADSVMFERLAE-NGREFEEQT--- 233
+ + F S KRM+ I G T + +KGA + E + NG++ + +
Sbjct: 524 -QFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLE 582
Query: 234 -------KEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIA 286
++ A GLR L A + D+ + N E L A
Sbjct: 583 DCDRELIIANMESLAAEGLRVLAFASKSFDKAD-----------NNDDQLKNETLNRATA 631
Query: 287 EKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ 346
E +L LG + D +N ++K QAGI + +LTGD ETA I ++
Sbjct: 632 ES---DLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPP 688
Query: 347 GM---RQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 403
R I+ S ++ G + S+E +
Sbjct: 689 NFIHDRDEIMDS---------------------------MVMTGSQFDALSDEEV----- 716
Query: 404 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463
DD+K L L +A R +P+ K + + + + + GDG
Sbjct: 717 ------------DDLKALCLVIA---------RCAPQTKVKMIEALHRRKAFCAMT-GDG 754
Query: 464 ANDVGMLQEADIGVGISGVEGMQ-AVMSSDIAIAQFRFLERLLLV-HGHWCYRRISSMIC 521
ND L+ A++G+ + G+ G A +SDI ++ F L + G + I +
Sbjct: 755 VNDSPSLKMANVGIAM-GINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVL 813
Query: 522 YFFYKNIAFGFTL-----FFFEAYAS-FSGQPVYNDWFLSLYNVFFTSLPVIALGV 571
+ +N+A L F E S F PV W + + P + LG+
Sbjct: 814 HLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWC----IMITSCFPAMGLGL 865
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 3e-07
Identities = 31/147 (21%), Positives = 52/147 (35%), Gaps = 25/147 (17%)
Query: 424 ELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 483
+A + R SP+QK + ++ K GDG ND L++AD+G+ +
Sbjct: 421 AIAKELGIDVFARVSPEQKLQIVEALQ-KKGHIVAMTGDGVNDAPALKKADVGIAMG--- 476
Query: 484 GMQAVMSSDIAIAQFRFLERLLLV-HGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYAS 542
A ++DI + + V G + I S I + IA+ L
Sbjct: 477 ---AKAAADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFW----AIAYNLILIPLAL--- 526
Query: 543 FSGQPVYNDWFLSLYNVFFTSLPVIAL 569
L + + L +AL
Sbjct: 527 ----------LLIVIILLLPMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 4e-07
Identities = 74/294 (25%), Positives = 122/294 (41%), Gaps = 79/294 (26%)
Query: 208 LLLSKGADSVMFERLAE---NGRE--FEEQTKEHIN----EYADAGLRTLILAYRELDEK 258
LL+ KGA + ER + +G+E +E+ KE E G R L + L ++
Sbjct: 478 LLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDE 537
Query: 259 EYK---QFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDK 315
++ QF+ T+ N + NL +G ++ D + VP+ + K
Sbjct: 538 QFPEGFQFD---TDDVNFPT---------------DNLCFVGLISMIDPPRAAVPDAVGK 579
Query: 316 LAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT------LEKSEDK 369
AGIK+ ++TGD TA I ++ +G +ET E + + +
Sbjct: 580 CRSAGIKVIMVTGDHPITAKAIAKGVGIISEG-------NETVEDIAARLNIPVSQVNPR 632
Query: 370 SAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGC 429
A KA V+H G +L D ++E L + L Y E
Sbjct: 633 DA-----KACVVH----GSDLKDMTSEQLD--------EILKYHTE-------------- 661
Query: 430 ASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGV--GISG 481
++ R+SP+QK ++ + + + GDG ND L++ADIGV GI+G
Sbjct: 662 --IVFARTSPQQKLIIVEGCQ-RQGAIVAVTGDGVNDSPALKKADIGVAMGIAG 712
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 4e-07
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 30/160 (18%)
Query: 179 RSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFE---RLAENG--REFEEQT 233
Y ++ L F R+R+SV+V +G LL+ KGA M + + R +E
Sbjct: 437 AGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEAR 496
Query: 234 KEHI----NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKI 289
+E + Y G R L++A RE+ E++ S
Sbjct: 497 RERLLALAEAYNADGFRVLLVATREIPG----------GESRAQYSTAD----------- 535
Query: 290 EKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGD 329
E++L++ G D + I L + G+ + VLTGD
Sbjct: 536 ERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGD 575
|
Length = 903 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 241 ADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIE-KNLILLGAT 299
A G+ +I A L ++ ++ + EEL A + +L++LG
Sbjct: 30 AALGVAIVIAAGENLTKEGREELVRRLLLRALAGEELLEELLRAGATVVAVLDLVVLGLI 89
Query: 300 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE 359
A+ D L G E + +L +AGIKL +LTGD TA I G+ ++S++
Sbjct: 90 ALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAI-----ARLLGLFDALVSADLYG 144
Query: 360 SKTLEKSEDKSAAAAA 375
+ K + K A
Sbjct: 145 LVGVGKPDPKIFELAL 160
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 0.001
Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 36/152 (23%)
Query: 189 FSSSRKRMSVIVRSEEGTLLLLSKGADSVMFE---RLAENGR------EFEEQTKEHINE 239
F R+RMSV+V L+ KGA + ++ NG + K +
Sbjct: 449 FDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDT 508
Query: 240 YADAGLRTLILAYREL--DEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLG 297
GLR + +A + L E +Y++ AD E +LIL G
Sbjct: 509 LNRQGLRVVAVATKYLPAREGDYQR-------------AD------------ESDLILEG 543
Query: 298 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGD 329
A D + + L +G+ + +LTGD
Sbjct: 544 YIAFLDPPKETTAPALKALKASGVTVKILTGD 575
|
Length = 902 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.003
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 180 SYSLLNVLEFSSSRKRMSVIVRS-EEGTLLLLSKGADSVMFERLAENGREFEEQTKEHIN 238
Y +L + F KR V E G ++KGA V+ L +N +E EE+ +E ++
Sbjct: 352 GYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVIL-DLCDNKKEIEEKVEEKVD 410
Query: 239 EYADAGLRTLILAY 252
E A G R L +A
Sbjct: 411 ELASRGYRALGVAR 424
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.004
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 457 TLAIGDGANDVGMLQEADIGV 477
+A GDG ND+ ML+ A +GV
Sbjct: 205 VIAFGDGENDIEMLELAGLGV 225
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|224731 COG1818, COG1818, Predicted RNA-binding protein, contains THUMP domain [General function prediction only] | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.004
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 14/88 (15%)
Query: 218 MFERLAENGREFEEQTKEHINEYADA--------GLRTLILAYRELDEKEYKQFNEEFTE 269
M + L FE Q +E I E G +++ ELDE+E + +E E
Sbjct: 1 MMKLLVTTPPGFERQAREEIKEIIGDLEAEPRPTGFPGVLIVESELDEEEALEKLKEVPE 60
Query: 270 A------KNSVSADREELAEEIAEKIEK 291
+ V D +E+ E AE E+
Sbjct: 61 VERVIPVEIEVETDLDEIEEAAAELAEE 88
|
Length = 175 |
| >gnl|CDD|234684 PRK00192, PRK00192, mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.004
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 456 TTLAIGDGANDVGMLQEADIGVGISGVEG 484
T+A+GD ND+ ML+ ADI V + G +G
Sbjct: 209 ETIALGDSPNDLPMLEAADIAVVVPGPDG 237
|
Length = 273 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.004
Identities = 34/152 (22%), Positives = 53/152 (34%), Gaps = 32/152 (21%)
Query: 187 LEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMF---ERLAENGR------EFEEQTKEHI 237
+ F R+R+SV+V + L+ KGA M G + + ++
Sbjct: 412 IPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMT 471
Query: 238 NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLG 297
E G+R + +A + L E + EE LI+ G
Sbjct: 472 AEMNRQGIRVIAVATKTLKVGE------------ADFTKTDEE-----------QLIIEG 508
Query: 298 ATAVEDKLQNGVPECIDKLAQAGIKLWVLTGD 329
D + E I L + GI + VLTGD
Sbjct: 509 FLGFLDPPKESTKEAIAALFKNGINVKVLTGD 540
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 793 | |||
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 99.98 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 99.98 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.88 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.6 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.52 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.4 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.98 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.92 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.88 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.82 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.82 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.79 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.74 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.74 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.73 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.72 | |
| PLN02887 | 580 | hydrolase family protein | 98.71 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.71 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.67 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.66 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.61 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.53 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 98.49 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.49 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.36 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.36 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.36 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.35 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.34 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.28 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.24 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.22 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.21 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.21 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.2 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.17 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.16 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.16 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.13 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.03 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.01 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.99 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.98 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.96 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.96 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.88 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.87 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.74 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.73 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.68 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.66 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.65 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.64 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.53 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.53 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.27 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.26 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.18 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.13 | |
| PLN02423 | 245 | phosphomannomutase | 97.12 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.04 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.01 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.01 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.0 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.99 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.99 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.95 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.82 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.81 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.67 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.59 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.53 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.47 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.43 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.35 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.17 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.15 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.12 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.08 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.07 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.07 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.02 | |
| PLN03017 | 366 | trehalose-phosphatase | 95.98 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 95.98 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.93 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 95.89 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.76 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.73 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.71 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.64 | |
| PLN02940 | 382 | riboflavin kinase | 95.36 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.34 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.33 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.32 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.18 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.12 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.06 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 94.98 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.68 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.66 | |
| PLN02811 | 220 | hydrolase | 94.66 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.63 | |
| PLN02151 | 354 | trehalose-phosphatase | 94.11 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 93.91 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 93.59 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.25 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 93.06 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 93.04 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 93.0 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.68 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 92.41 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 91.93 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 91.55 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 91.01 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 90.93 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 90.3 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 90.04 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 90.01 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 89.76 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 89.73 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 89.54 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 88.44 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 87.95 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 87.42 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 86.77 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 86.31 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 86.17 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 84.89 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 83.14 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 80.73 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 80.72 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 80.42 |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-145 Score=1268.62 Aligned_cols=729 Identities=60% Similarity=0.988 Sum_probs=661.0
Q ss_pred CCcCCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhh
Q 003824 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE 80 (793)
Q Consensus 1 my~~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (793)
|||+++++++.+|+++++|+||||+||+||||||||+|.|+|++|+++|..|+...++.+....++.+.. .
T Consensus 364 my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~---------~ 434 (1151)
T KOG0206|consen 364 MYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGD---------V 434 (1151)
T ss_pred hhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCcccccc---------c
Confidence 8999999999999999999999999999999999999999999999999999988766433332221111 0
Q ss_pred cccccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeec
Q 003824 81 DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERT 160 (793)
Q Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~ 160 (793)
.....+++.|.|+++.++.+...+..+..++|++++|+||++.++.+++.+++.|+++||||.|||++|+++|+.+..|+
T Consensus 435 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt 514 (1151)
T KOG0206|consen 435 NEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRT 514 (1151)
T ss_pred cccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeecc
Confidence 11335678899999999999888899999999999999999999987666689999999999999999999999999999
Q ss_pred CceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHH
Q 003824 161 QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEY 240 (793)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~ 240 (793)
++.+++...+ .+++|++|+++||+|.|||||||||+|+|+++|||||||++|++++...+....+.+.+|+++|
T Consensus 515 ~~~vti~~~g------~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~y 588 (1151)
T KOG0206|consen 515 PDSVTIRELG------VEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEY 588 (1151)
T ss_pred CceEEEeccc------cceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHH
Confidence 9999999555 2489999999999999999999999999999999999999999999988888999999999999
Q ss_pred HhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcC
Q 003824 241 ADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAG 320 (793)
Q Consensus 241 ~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~ag 320 (793)
|.+|+||||+|||+++++||++|.++|.+|++++ .||+++++++++.+|+||+++|.|||||+||+||||+|+.|++||
T Consensus 589 A~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~-~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AG 667 (1151)
T KOG0206|consen 589 ATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSL-TDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAG 667 (1151)
T ss_pred HhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhc-cCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcC
Confidence 9999999999999999999999999999999999 699999999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCC
Q 003824 321 IKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGP 400 (793)
Q Consensus 321 Ikv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (793)
||+||||||+.|||++||++|+++++++..+.++..+.+.... .+... ...+.+..+.............. ..
T Consensus 668 IKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~-----~~~~~-~~~~~l~~~~~~~~~~~~~~~~~-~~ 740 (1151)
T KOG0206|consen 668 IKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSS-----LDATA-ALKETLLRKFTEELEEAKLEHSE-KP 740 (1151)
T ss_pred CEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcc-----hhhHH-HHHHHHHHhhhHHHHHHhhccCc-CC
Confidence 9999999999999999999999999999999998877541111 11111 22233333332222221111111 36
Q ss_pred eEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEec
Q 003824 401 LALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS 480 (793)
Q Consensus 401 ~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~ 480 (793)
.+++|||+++.++++++.+..|..++..|++|+|||+||.||+.+|+++|+..+.+|+|||||+||++|||+|||||||+
T Consensus 741 ~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIs 820 (1151)
T KOG0206|consen 741 FALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGIS 820 (1151)
T ss_pred ceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeec
Confidence 89999999999999998889999999999999999999999999999999878999999999999999999999999999
Q ss_pred cCCcccccccCCeeecchhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHHHHHHh
Q 003824 481 GVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVF 560 (793)
Q Consensus 481 g~~~~~a~~~aD~~i~~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~ 560 (793)
|.||+||.++|||++.+|++|.+||++||||+|.|++++++|+||||+++++++|||+++++|||+++|++|++.+||++
T Consensus 821 G~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~ 900 (1151)
T KOG0206|consen 821 GQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVL 900 (1151)
T ss_pred cchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCceeehhh
Q 003824 561 FTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEI 640 (793)
Q Consensus 561 ~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~g~~~~~~~ 640 (793)
||++|++++|++|||++++.++++|+||+.++++..|+++.|+.|++.|++|++++|++++..+.......+|.+.+.+.
T Consensus 901 FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~ 980 (1151)
T KOG0206|consen 901 FTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWT 980 (1151)
T ss_pred eecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheeeeeccCCCcCChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999887667778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhccCccccc-hhHHHHHHHhccChHHHHHHHHHH
Q 003824 641 LGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYIST-TAYKVFIEACAPAPSFWLITLLVL 719 (793)
Q Consensus 641 ~~t~~f~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~-~~~~~~~~~~~~s~~~wl~~l~~~ 719 (793)
+|+.+||++|+++++++++.+++|+|++|+.+|+|+++||++.++|...++.+.. ..+..++.....+|.+|+.+++++
T Consensus 981 ~G~~~~T~~Vivv~~~iaL~~~ywT~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~ 1060 (1151)
T KOG0206|consen 981 LGTTVFTIIVIVVNLKIALETSYWTWINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTV 1060 (1151)
T ss_pred ccceEEEEEEEEEEeeeeeeehheeHHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999864433333 445557778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCC
Q 003824 720 MSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQ 752 (793)
Q Consensus 720 ~~~ll~~~i~k~~~~~~~p~~~~i~~e~~~~~~ 752 (793)
++|++|+++++.+++.++|++++++||+++.++
T Consensus 1061 v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~~~~ 1093 (1151)
T KOG0206|consen 1061 VAALLPDFVYKSLQRTFFPTDHDIIQEIEKYRR 1093 (1151)
T ss_pred HHHHhHHHHHHHHHHhhCCcHHHHHHHHHhccc
Confidence 999999999999999999999999999997543
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-125 Score=1142.87 Aligned_cols=720 Identities=39% Similarity=0.624 Sum_probs=606.5
Q ss_pred CCcCCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhh
Q 003824 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE 80 (793)
Q Consensus 1 my~~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (793)
|||+++++++.||+++++|+||||+|||||||||||+|+|+|++|+++|..|+.+....+..... .....+ .
T Consensus 430 m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~-~~~~~~-------~ 501 (1178)
T PLN03190 430 MYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAG-YSVEVD-------G 501 (1178)
T ss_pred cccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhc-cccccc-------c
Confidence 89999999999999999999999999999999999999999999999999997532211111000 000000 0
Q ss_pred cccccCCCCcCchhhhcCCC--CCCCchHHHHHHHHHHHhhccccccccCC--C---CceeeecCCccHHHHHHHHHHcC
Q 003824 81 DKASIKGFNFEDERIMNGSW--VNEPHADVIQKFLRLLAICHTALPEVDEE--N---GKISYEAESPDEAAFVIAARELG 153 (793)
Q Consensus 81 ~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~lalc~~~~~~~~~~--~---~~~~y~~~sp~E~Alv~~a~~~g 153 (793)
.........+.|+.+.+... ...+..+.+++|++++++||++.++..++ . +.++|+|+||||.||+++|+++|
T Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G 581 (1178)
T PLN03190 502 KILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYG 581 (1178)
T ss_pred ccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCC
Confidence 00000000112333322111 11122345789999999999999853211 1 24679999999999999999999
Q ss_pred CEEEeecCceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhc-chhhHHH
Q 003824 154 FEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN-GREFEEQ 232 (793)
Q Consensus 154 ~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~-~~~~~~~ 232 (793)
+.+..|+++.+.+...+.. .+|++++++||+|+|||||||++++++++++||||||++|+++|... +...++.
T Consensus 582 ~~l~~r~~~~i~i~~~~~~------~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~ 655 (1178)
T PLN03190 582 FMLIERTSGHIVIDIHGER------QRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRA 655 (1178)
T ss_pred CeEecccCCeEEEeeccce------ecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHH
Confidence 9999999999988877654 78999999999999999999999998999999999999999999764 3356778
Q ss_pred HHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHH
Q 003824 233 TKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPEC 312 (793)
Q Consensus 233 ~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~ 312 (793)
+.+++++|+.+|+||||+|||+++++|+++|.++|++|+.++ .+|++.+++..+++|+||+++|+++++|+||++++++
T Consensus 656 ~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~ 734 (1178)
T PLN03190 656 TEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTAL-IGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEA 734 (1178)
T ss_pred HHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhh-hhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHH
Confidence 899999999999999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhh---hh
Q 003824 313 IDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRG---KE 389 (793)
Q Consensus 313 I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 389 (793)
|+.|++|||++||+|||+.+||++||++|||+++++..+.++.+..+. ....+....... .+.... .+
T Consensus 735 I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~-------~~~~l~~~~~~~--~~~~~~~~~~~ 805 (1178)
T PLN03190 735 IESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKES-------CRKSLEDALVMS--KKLTTVSGISQ 805 (1178)
T ss_pred HHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhh-------HHHHHHHHhhhh--hhccccccccc
Confidence 999999999999999999999999999999999998888886654221 111111111000 000000 00
Q ss_pred c-cccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChh
Q 003824 390 L-LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVG 468 (793)
Q Consensus 390 ~-~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ 468 (793)
. ...........+++++|.++..++++++.+.|.+++..|++|||||++|+||++||+++|+..+++|+|||||+||++
T Consensus 806 ~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~ 885 (1178)
T PLN03190 806 NTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVS 885 (1178)
T ss_pred cccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHH
Confidence 0 000112245678999999999999888888999999999999999999999999999999855689999999999999
Q ss_pred hhhhcceeEEeccCCcccccccCCeeecchhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCccc
Q 003824 469 MLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPV 548 (793)
Q Consensus 469 ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~ 548 (793)
|||+|||||||+|+||.||+++|||++.+|++|.+||++||||+|.|++.+++|+||||+++++++|||+++++|||+++
T Consensus 886 mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~l 965 (1178)
T PLN03190 886 MIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTA 965 (1178)
T ss_pred HHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 003824 549 YNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQA 628 (793)
Q Consensus 549 ~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 628 (793)
|++|.+++||++||++|++++|++|+|++++.++++|+||+.+++++.++.+.|+.|++.|+|||+++|+++++.+...
T Consensus 966 y~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~- 1044 (1178)
T PLN03190 966 INEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFAYWAS- 1044 (1178)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988776532
Q ss_pred ccCCCceeehhhHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccC
Q 003824 629 FRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPA 708 (793)
Q Consensus 629 ~~~~g~~~~~~~~~t~~f~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s 708 (793)
..+.+.+++++++++++++|+++++.+++|+|+++..+|+|+++++++.+++..+|. +. .|+.++ .+..+
T Consensus 1045 ------~~~~~~~~~~~~~~~v~~vnl~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~~~-~~--~~~~~~-~~~~~ 1114 (1178)
T PLN03190 1045 ------TIDGSSIGDLWTLAVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVIVIDAIPT-LP--GYWAIF-HIAKT 1114 (1178)
T ss_pred ------CcCceeEhHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhccc-ch--hHHHHH-HHhcc
Confidence 123345678888999999999999999999999999999999999999988887763 22 245344 56679
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCCCC
Q 003824 709 PSFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWFRSDGQTDD 755 (793)
Q Consensus 709 ~~~wl~~l~~~~~~ll~~~i~k~~~~~~~p~~~~i~~e~~~~~~~~~ 755 (793)
|.||+.++++++++++|+++++++++.|+|..++++||.++....++
T Consensus 1115 ~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~ 1161 (1178)
T PLN03190 1115 GSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAREAEKFGTFRE 1161 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999776654333
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-118 Score=1089.52 Aligned_cols=719 Identities=53% Similarity=0.877 Sum_probs=613.6
Q ss_pred CCcCCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhh
Q 003824 1 MYYEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQE 80 (793)
Q Consensus 1 my~~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (793)
||+++++++++||+++++|+||+|+|||||||||||+|+|+|++|+++|..|+....+......+..+...+... .
T Consensus 336 m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~----~ 411 (1057)
T TIGR01652 336 MYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENEN----S 411 (1057)
T ss_pred hhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccc----c
Confidence 677888889999999999999999999999999999999999999999999986544322221111110000000 0
Q ss_pred cccccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccc-cCCCCceeeecCCccHHHHHHHHHHcCCEEEee
Q 003824 81 DKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEV-DEENGKISYEAESPDEAAFVIAARELGFEFYER 159 (793)
Q Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~-~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r 159 (793)
.....+..+|.++++.+......+..+.+.+|++++++||++.++. +++.+.+.|+++||+|.||+++|+.+|+.+.+|
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~ 491 (1057)
T TIGR01652 412 MLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFER 491 (1057)
T ss_pred ccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEe
Confidence 0001122455666655433223344566889999999999999875 233345889999999999999999999999999
Q ss_pred cCcee--EEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHH
Q 003824 160 TQTSI--SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHI 237 (793)
Q Consensus 160 ~~~~~--~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~ 237 (793)
+.+.+ .+...+. ...|++++++||||+|||||||++++++++++|+||||++|+++|...+++.++.+.+++
T Consensus 492 ~~~~~~~~i~~~~~------~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~ 565 (1057)
T TIGR01652 492 TPKSISLLIEMHGE------TKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHL 565 (1057)
T ss_pred cCCceEEEEEeCCC------EEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHH
Confidence 98844 3443333 378999999999999999999999998899999999999999999865456678889999
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHH
Q 003824 238 NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLA 317 (793)
Q Consensus 238 ~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~ 317 (793)
++|+.+|+|||++|||.++++|+++|.++|++|+.++ .+|++.+++.++.+|+||+|+|++|+|||||++|+++|+.|+
T Consensus 566 ~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~-~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~ 644 (1057)
T TIGR01652 566 ENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTAL-TDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLR 644 (1057)
T ss_pred HHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHH
Confidence 9999999999999999999999999999999999998 799999999999999999999999999999999999999999
Q ss_pred HcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCC
Q 003824 318 QAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNES 397 (793)
Q Consensus 318 ~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (793)
+||||+||+|||+.+||++||++||++.++...+.+++++.+... .....+.. +......... ....
T Consensus 645 ~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~----~~~~~i~~--------~~~~~~~~~~-~~~~ 711 (1057)
T TIGR01652 645 QAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATR----SVEAAIKF--------GLEGTSEEFN-NLGD 711 (1057)
T ss_pred HCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhH----HHHHHHHH--------HHHHHHHhhh-hhcc
Confidence 999999999999999999999999999988887777765422110 00011111 1110000010 0112
Q ss_pred CCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeE
Q 003824 398 LGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGV 477 (793)
Q Consensus 398 ~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI 477 (793)
....+++++|++++.+++++++++|.+++..|+++||||++|+||+++|+++|+..|++|+|||||+||++|||+|||||
T Consensus 712 ~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGI 791 (1057)
T TIGR01652 712 SGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV 791 (1057)
T ss_pred CCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeee
Confidence 45678999999999999888888999999999999999999999999999999844999999999999999999999999
Q ss_pred EeccCCcccccccCCeeecchhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHHHH
Q 003824 478 GISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLY 557 (793)
Q Consensus 478 ~i~g~~~~~a~~~aD~~i~~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~ 557 (793)
|++|+|+.||+++|||++.+|++|.+++++|||++|.|+++++.|.||||+++++++|||.++++|||+++|++|+++||
T Consensus 792 gi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~ 871 (1057)
T TIGR01652 792 GISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLY 871 (1057)
T ss_pred EecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCceee
Q 003824 558 NVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIG 637 (793)
Q Consensus 558 n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~g~~~~ 637 (793)
|+++|++|++++|++|+|++++.++++|++|+.+++++.++.+.|+.|++.|++|++++|++.++.+.......+|...+
T Consensus 872 n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~ 951 (1057)
T TIGR01652 872 NVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSLDD 951 (1057)
T ss_pred HHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999888876544446788889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHH
Q 003824 638 LEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLL 717 (793)
Q Consensus 638 ~~~~~t~~f~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~ 717 (793)
.+.+++++|+++++++|+++++.+++|+|+++..+|+|+++++++.+++..++. +...|+. +.....+|.+|+.+++
T Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~~~~~wt~~~~~~~~~S~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~s~~f~l~~ll 1028 (1057)
T TIGR01652 952 FSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIVYSSIFP--SPAFYKA-APRVMGTFGFWLVLLV 1028 (1057)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcc--cccHHHH-HHHHHccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999888875542 3445553 4467789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Q 003824 718 VLMSSLLPYFTYSAIQMRFFPLHHQMIQW 746 (793)
Q Consensus 718 ~~~~~ll~~~i~k~~~~~~~p~~~~i~~e 746 (793)
+++++++|+++++++++.|+|+.++++||
T Consensus 1029 ~~~~~l~p~~~~~~~~~~~~P~~~~~i~~ 1057 (1057)
T TIGR01652 1029 IVLISLLPRFTYKAIQRLFRPPDYDIVQE 1057 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHhhC
Confidence 99999999999999999999999999875
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-108 Score=871.06 Aligned_cols=657 Identities=32% Similarity=0.509 Sum_probs=568.3
Q ss_pred CCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccH-HHHHHHhhcCCCCccchhhhhhcccccC
Q 003824 8 KPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTE-VERAMARRKGSPLEEEVTEEQEDKASIK 86 (793)
Q Consensus 8 ~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (793)
.+..+|++++.|+||+|.|+.+|||||||+|+|.|++++.+...|+.+..+ ++....+-.+.+. ...+
T Consensus 391 pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~-----------~~~~ 459 (1051)
T KOG0210|consen 391 PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGR-----------NKGK 459 (1051)
T ss_pred CceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCc-----------cccc
Confidence 578999999999999999999999999999999999999999999865433 2222211111000 0000
Q ss_pred CCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeEE
Q 003824 87 GFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISV 166 (793)
Q Consensus 87 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i 166 (793)
.. ......+-....++..+++|+||+|.|..++ +|++.||+.||||.|||++.+..|..+..|+.+.+++
T Consensus 460 ~~---------~~~~k~~~s~rv~~~V~alalCHNVTPv~e~-~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL 529 (1051)
T KOG0210|consen 460 GA---------LSRVKKDMSARVRNAVLALALCHNVTPVFED-DGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITL 529 (1051)
T ss_pred cc---------chhhcCcccHHHHHHHHHHHHhccCCcccCC-CceEEeecCCCCeEEEEEeeeecceEEeecccceEEE
Confidence 00 0111234556788999999999999998754 4789999999999999999999999999999999999
Q ss_pred EecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcC-CCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhccc
Q 003824 167 HELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE-EGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGL 245 (793)
Q Consensus 167 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~ 245 (793)
..++.. ...|+||.++||+|++|||.+|||++ .+++..|.||||.+|-.....+ +.+++...+||++|+
T Consensus 530 ~~~~~~-----~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N-----dWleEE~gNMAREGL 599 (1051)
T KOG0210|consen 530 RVPLDD-----ELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN-----DWLEEECGNMAREGL 599 (1051)
T ss_pred ecCCCc-----ceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc-----hhhhhhhhhhhhhcc
Confidence 887554 58999999999999999999999997 7899999999999998776544 467788899999999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHH-HhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEE
Q 003824 246 RTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAE-KIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 324 (793)
Q Consensus 246 r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~-~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~ 324 (793)
|||++|+|.++++||+.|.+.|++|+.++ .||++++.++.+ .+|+||.++|++|+||+||++|+.+++.||+||||||
T Consensus 600 RtLVvakK~Ls~~eye~Fe~~y~~A~lSi-~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiW 678 (1051)
T KOG0210|consen 600 RTLVVAKKVLSEEEYEAFEEAYNAAKLSI-SDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIW 678 (1051)
T ss_pred eEEEEEecccCHHHHHHHHHHHHhhhCcc-chHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEE
Confidence 99999999999999999999999999999 899999999877 8999999999999999999999999999999999999
Q ss_pred EEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEE
Q 003824 325 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALI 404 (793)
Q Consensus 325 mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 404 (793)
|||||+.|||+.||++.+++..+..+.++..-...... .+.+.. + ....+.+|+
T Consensus 679 MLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~da------h~eL~~----------------l----R~k~~~aLv 732 (1051)
T KOG0210|consen 679 MLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDA------HNELNN----------------L----RRKTDCALV 732 (1051)
T ss_pred EEcCcchhheeeeehhccceecCceEEEEEecCCchHH------HHHHHH----------------h----hcCCCcEEE
Confidence 99999999999999999999999888887765432111 111110 0 245678999
Q ss_pred EeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCc
Q 003824 405 IDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG 484 (793)
Q Consensus 405 i~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~ 484 (793)
|+|++++..++ .+.+.|.++.+.|.+|||||++|.||+++++++|++.++.|++||||.||++|||+||+||||.|+||
T Consensus 733 i~G~Sl~~cl~-yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEG 811 (1051)
T KOG0210|consen 733 IDGESLEFCLK-YYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEG 811 (1051)
T ss_pred EcCchHHHHHH-HHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccc
Confidence 99999997776 67888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCeeecchhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHHHHHHhhccc
Q 003824 485 MQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSL 564 (793)
Q Consensus 485 ~~a~~~aD~~i~~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~l 564 (793)
.||..||||.|.+|.++.+||++|||.+|.|..++-+|.+.+.+.+..++.+|+....|.+.++|..+.+..|..++|.+
T Consensus 812 kQASLAADfSItqF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTml 891 (1051)
T KOG0210|consen 812 KQASLAADFSITQFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTML 891 (1051)
T ss_pred cccchhccccHHHHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCceeehhhHHHH
Q 003824 565 PVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTT 644 (793)
Q Consensus 565 p~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~g~~~~~~~~~t~ 644 (793)
|++.+ +.|+|++++..+.+|+||+.-.+++.++.+.|+.|++.++||+.++.++++..+.. ++..+.++
T Consensus 892 PVFSl-v~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~----------ef~~ivai 960 (1051)
T KOG0210|consen 892 PVFSL-VLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDT----------EFIHIVAI 960 (1051)
T ss_pred hhhee-eecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhh----------hheEeeee
Confidence 99999 67999999999999999999999999999999999999999999999887666543 22345578
Q ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHH
Q 003824 645 MYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLL 724 (793)
Q Consensus 645 ~f~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll 724 (793)
.|+++++...+++++..++|+|.....-..+++++++.+.+.. .+ +-.....++.|+.-+.++.+++++
T Consensus 961 sFtaLi~tELiMVaLtv~tw~~~m~vae~lsL~~Yivsl~~l~-------~y----fd~~f~~~~~Fl~k~t~I~~vS~L 1029 (1051)
T KOG0210|consen 961 SFTALILTELIMVALTVRTWHWLMVVAELLSLALYIVSLAFLH-------EY----FDRYFILTYVFLWKVTVITLVSCL 1029 (1051)
T ss_pred eeHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH-------hH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999987777777777766544322 10 111223567777777888899999
Q ss_pred HHHHHHHHHHHhCCCHHHHHH
Q 003824 725 PYFTYSAIQMRFFPLHHQMIQ 745 (793)
Q Consensus 725 ~~~i~k~~~~~~~p~~~~i~~ 745 (793)
|.++.|+++|.+.|+.|-+++
T Consensus 1030 pl~~~K~lrrk~sPpSYaKl~ 1050 (1051)
T KOG0210|consen 1030 PLYFIKALRRKLSPPSYAKLQ 1050 (1051)
T ss_pred HHHHHHHHHhhcCCcchhhcc
Confidence 999999999999999998765
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-86 Score=793.65 Aligned_cols=556 Identities=31% Similarity=0.461 Sum_probs=444.7
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.+++++||+++++|+||++++||||||||||||+|+|++|++.+. +.+.+.
T Consensus 328 ~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~--~~~~~~------------------------- 380 (917)
T COG0474 328 RMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG--GKDIDD------------------------- 380 (917)
T ss_pred HHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCC--cccccc-------------------------
Confidence 45788999999999999999999999999999999999999999851 000000
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
......+...+++.++++||++.+..+ + .+..+||+|.||++++.+.|+.+ .+
T Consensus 381 -----------------~~~~~~~~~~~~l~~~~lc~~~~~~~~-~----~~~~gdptE~Al~~~a~~~~~~~-~~---- 433 (917)
T COG0474 381 -----------------KDLKDSPALLRFLLAAALCNSVTPEKN-G----WYQAGDPTEGALVEFAEKLGFSL-DL---- 433 (917)
T ss_pred -----------------cccccchHHHHHHHHHHhcCccccccc-C----ceecCCccHHHHHHHHHhcCCcC-CH----
Confidence 000123345589999999999988755 3 66789999999999999999744 10
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhh------cchhhHHHHHHHH
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAE------NGREFEEQTKEHI 237 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~------~~~~~~~~~~~~~ 237 (793)
......|++++.+||||+|||||||++..++++++++|||||+|+++|+. ..++.++.+.+..
T Consensus 434 -----------~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~ 502 (917)
T COG0474 434 -----------SGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAV 502 (917)
T ss_pred -----------HHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHH
Confidence 01236678999999999999999999977788999999999999999985 2456788899999
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHH
Q 003824 238 NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLA 317 (793)
Q Consensus 238 ~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~ 317 (793)
++|+.+|+|||++|||.++.++. +. .. +.+|+||+|+|+++++||||++|+++|+.|+
T Consensus 503 ~~la~~glRvla~A~k~~~~~~~----------------~~-----~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~ 560 (917)
T COG0474 503 KELASEGLRVLAVAYKKLDRAEK----------------DD-----EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELR 560 (917)
T ss_pred HHHHHHHHHHHHHHhccCCcccc----------------cc-----hh-hhhhccceeehhhhccCCCCccHHHHHHHHH
Confidence 99999999999999997765431 11 11 6789999999999999999999999999999
Q ss_pred HcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCC
Q 003824 318 QAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNES 397 (793)
Q Consensus 318 ~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (793)
+|||++||+|||+.+||.+||++||+..+..
T Consensus 561 ~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~------------------------------------------------- 591 (917)
T COG0474 561 EAGIKVWMITGDHVETAIAIAKECGIEAEAE------------------------------------------------- 591 (917)
T ss_pred HCCCcEEEECCCCHHHHHHHHHHcCCCCCCC-------------------------------------------------
Confidence 9999999999999999999999999754321
Q ss_pred CCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeE
Q 003824 398 LGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGV 477 (793)
Q Consensus 398 ~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI 477 (793)
. .++++|..++.+.++++.+.+. .+. ||||+||+||.+||+.+|+ .|++|+|+|||+||+||||+|||||
T Consensus 592 --~-~~vi~G~el~~l~~~el~~~~~----~~~--VfARvsP~qK~~IV~~lq~-~g~vVamtGDGvNDapALk~ADVGI 661 (917)
T COG0474 592 --S-ALVIDGAELDALSDEELAELVE----ELS--VFARVSPEQKARIVEALQK-SGHVVAMTGDGVNDAPALKAADVGI 661 (917)
T ss_pred --c-eeEeehHHhhhcCHHHHHHHhh----hCc--EEEEcCHHHHHHHHHHHHh-CCCEEEEeCCCchhHHHHHhcCccE
Confidence 0 5699999999888765444444 444 9999999999999999999 7999999999999999999999999
Q ss_pred EeccCCcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHH
Q 003824 478 GISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLS 555 (793)
Q Consensus 478 ~i~g~~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l 555 (793)
||+++....|+++||+++.+.++ +..+ ++|||++|.|+++++.|.+++|+..+++++++.++..+ ..+|+++|++
T Consensus 662 amg~~Gtdaak~Aadivl~dd~~~~i~~a-v~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~--~~p~~~~qll 738 (917)
T COG0474 662 AMGGEGTDAAKEAADIVLLDDNFATIVLA-VVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF--FLPLTPLQLL 738 (917)
T ss_pred EecccHHHHHHhhcceEeecCcHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccHHHHHHH
Confidence 99653333388999999998666 4444 99999999999999999999999999999999988766 5679999999
Q ss_pred HHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCCc
Q 003824 556 LYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAF-RKGGE 634 (793)
Q Consensus 556 ~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~-~~~g~ 634 (793)
|+|++++++|++++++++ ++...+++|+ ++++..+|+++.++.|++...+++++++++.+..+..... ...+.
T Consensus 739 ~inll~d~~pa~~L~~~~---~~~~~m~~~~---~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 812 (917)
T COG0474 739 WINLLTDSLPALALGVED---PESDVMKRPP---RGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGL 812 (917)
T ss_pred HHHHHHhhhhhheeecCC---CcccccccCC---CCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 999999999999999976 4455555553 4788999999999999888888888887777665543221 11121
Q ss_pred eeehhhHHHHHHHHHHHHHHHHHHHHhcch----h--hHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccC
Q 003824 635 VIGLEILGTTMYTCVVWVVNCQMALSVTYF----T--YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPA 708 (793)
Q Consensus 635 ~~~~~~~~t~~f~~~v~~~~~~~~l~~~~~----~--~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s 708 (793)
........+++|+.+++++.+..+.....| + ++.+..+|+++++..++.++..++|..... .|...+.+
T Consensus 813 ~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~-----~f~~~~~~ 887 (917)
T COG0474 813 DLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLK-----IFQPTPLS 887 (917)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhh-----hccCCCCc
Confidence 112446778888888888877766432221 1 236788899888888888888887752112 45566666
Q ss_pred hHHHHHHHHHH
Q 003824 709 PSFWLITLLVL 719 (793)
Q Consensus 709 ~~~wl~~l~~~ 719 (793)
...|+.++++.
T Consensus 888 ~~~~~~~~~~~ 898 (917)
T COG0474 888 LFEWLIAIAVA 898 (917)
T ss_pred HHHHHHHHHHH
Confidence 66777766555
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-86 Score=724.92 Aligned_cols=613 Identities=22% Similarity=0.282 Sum_probs=475.4
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
+|.+++++||++.++|+||.+++||||||||||+|+|.+.++++.+..+... ++. .. .|..
T Consensus 312 rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~-~~f--~~---tg~t------------- 372 (972)
T KOG0202|consen 312 RMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV-DEF--NP---TGTT------------- 372 (972)
T ss_pred HHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc-ccc--cc---CCce-------------
Confidence 5778999999999999999999999999999999999999999977654332 100 00 0000
Q ss_pred ccCCCCcCchhhhcCC--CCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecC
Q 003824 84 SIKGFNFEDERIMNGS--WVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQ 161 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~ 161 (793)
++-.+....+.. .......+.+++++.+.++||.+..+.++. +.++- -|.|+|.||...|+++|+.-...+.
T Consensus 373 ----y~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~-~G~pTE~AL~vlaeKm~l~~~~~~~ 446 (972)
T KOG0202|consen 373 ----YSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDA-DCYEK-VGEPTEGALIVLAEKMGLPGTRSTN 446 (972)
T ss_pred ----eCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHh-cCCchHHHHHHHHHHcCCCcchhhc
Confidence 000011111110 011234567899999999999999887664 33332 3699999999999999986533111
Q ss_pred ceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCc--EEEEEecCchHhHHHHhhc-----------chh
Q 003824 162 TSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGT--LLLLSKGADSVMFERLAEN-----------GRE 228 (793)
Q Consensus 162 ~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~--~~l~~KGa~~~i~~~~~~~-----------~~~ 228 (793)
. .-.+ +..+.+...+.++...++||+|+||+|||.+.++.++ +.+|+|||+|.|+++|+.. ++.
T Consensus 447 ~--s~~~-~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~ 523 (972)
T KOG0202|consen 447 L--SNEE-ASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQA 523 (972)
T ss_pred c--cccc-cccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHH
Confidence 1 0111 2233333446677789999999999999999987664 8999999999999999543 345
Q ss_pred hHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHH--HHHHhhcCceEEEEEeeecccC
Q 003824 229 FEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEE--IAEKIEKNLILLGATAVEDKLQ 306 (793)
Q Consensus 229 ~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~--~~~~ie~~l~~lG~~~ieD~lr 306 (793)
.++.+.+...+++.+|+|||++|+++.+.. ...++.+.+ .+...|+||+|+|++|+.||+|
T Consensus 524 ~re~il~~~~~~g~~gLRvLalA~~~~~~~-----------------~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR 586 (972)
T KOG0202|consen 524 SRETILANVYEMGSEGLRVLALASKDSPGQ-----------------VPDDQDLNDTSNRATAESDLTFVGLVGILDPPR 586 (972)
T ss_pred HHHHHHHHHHHHhhccceEEEEEccCCccc-----------------ChhhhhhcccccccccccceEEEEEeeccCCCc
Confidence 788899999999999999999999987641 011111111 2467799999999999999999
Q ss_pred CChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhh
Q 003824 307 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIR 386 (793)
Q Consensus 307 ~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (793)
++|+++|+.|++|||+|.|+|||+.+||.+||+++|+...+.+
T Consensus 587 ~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed------------------------------------- 629 (972)
T KOG0202|consen 587 PEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED------------------------------------- 629 (972)
T ss_pred hhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc-------------------------------------
Confidence 9999999999999999999999999999999999998765421
Q ss_pred hhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccC
Q 003824 387 GKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGAND 466 (793)
Q Consensus 387 ~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND 466 (793)
-....++|++++.+..+++..... +..+|+|++|++|.+||+.||+ .|++|+|+|||+||
T Consensus 630 -------------~~~~~~TG~efD~ls~~~~~~~~~------~~~vFaR~~P~HK~kIVeaLq~-~geivAMTGDGVND 689 (972)
T KOG0202|consen 630 -------------VSSMALTGSEFDDLSDEELDDAVR------RVLVFARAEPQHKLKIVEALQS-RGEVVAMTGDGVND 689 (972)
T ss_pred -------------ccccccchhhhhcCCHHHHHHHhh------cceEEEecCchhHHHHHHHHHh-cCCEEEecCCCccc
Confidence 012267888887666555554333 4569999999999999999999 89999999999999
Q ss_pred hhhhhhcceeEEec--cCCcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhc
Q 003824 467 VGMLQEADIGVGIS--GVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYAS 542 (793)
Q Consensus 467 ~~ml~~AdvGI~i~--g~~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~ 542 (793)
+|+||.|||||+|+ |++. ||+|||+++.|++| +..+ +.|||.+|.|+++++.|.+..|+..+.++|+...+.
T Consensus 690 ApALK~AdIGIAMG~~GTdV--aKeAsDMVL~DDnFstIvaA-VEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~- 765 (972)
T KOG0202|consen 690 APALKKADIGIAMGISGTDV--AKEASDMVLADDNFSTIVAA-VEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFG- 765 (972)
T ss_pred hhhhhhcccceeecCCccHh--hHhhhhcEEecCcHHHHHHH-HHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhC-
Confidence 99999999999884 6666 99999999999666 7777 899999999999999999999999999988887773
Q ss_pred ccCcccchhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 003824 543 FSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIH 622 (793)
Q Consensus 543 ~s~~~~~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 622 (793)
+ ..+++++|+||+|++++.+|+.++|+++ ++.+.|.+.|+ +++..+++++.|+.++..|+|.++++.+.+.+
T Consensus 766 ~--p~pL~pvQiLWiNlvtDG~PA~aLG~ep--~D~DiM~kpPR----~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~ 837 (972)
T KOG0202|consen 766 I--PEPLIPVQILWINLVTDGPPATALGFEP--VDPDIMKKPPR----DSKDGIITGWLIFRYLAIGIIVGVATVGVFVW 837 (972)
T ss_pred C--CCcccchhhheeeeeccCCchhhcCCCC--CChhHHhCCCC----CCCCCeeeHHHHHHHHHhheeeeeeEhHhhhH
Confidence 2 2569999999999999999999999975 45556666665 78899999999999999999999988877776
Q ss_pred Hhccc--cccCC----------------CceeehhhHHHHHHHHHHHHHHHHHHHHhcchh-------hHHHHHHHHHHH
Q 003824 623 AMKQQ--AFRKG----------------GEVIGLEILGTTMYTCVVWVVNCQMALSVTYFT-------YIQHLFIWGGIT 677 (793)
Q Consensus 623 ~~~~~--~~~~~----------------g~~~~~~~~~t~~f~~~v~~~~~~~~l~~~~~~-------~~~~~~i~~si~ 677 (793)
.+... ....+ ..........|+.++++++.-.+.. +..++++ .|.|.++.++++
T Consensus 838 ~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNa-L~~~se~~slf~~~~~~N~~l~~ai~ 916 (972)
T KOG0202|consen 838 WMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNA-LNCLSENKSLFTMPPWSNRWLLWAIA 916 (972)
T ss_pred HHhcCCCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHH-hhcccCCcceEEecccccHHHHHHHH
Confidence 65531 11000 0000011222667777766554443 4455543 678999999999
Q ss_pred HHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 003824 678 FWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFF 737 (793)
Q Consensus 678 ~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~~ 737 (793)
+.++.++++.|+|+ ++. +|+..++++..|+.++.+....++.++++|++.|.+.
T Consensus 917 ~S~~~~f~ilYvp~-l~~-----iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 917 LSFVLHFLVLYVPP-LQR-----IFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred HHHHhhheEEEech-hhh-----hheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 99999999999997 566 7788999999999999999999999999999999764
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-81 Score=751.89 Aligned_cols=642 Identities=17% Similarity=0.210 Sum_probs=459.5
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCE-eeCCCccHHHHHHHhhcCCCCccchhhhhhcc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGT-SYGRGVTEVERAMARRKGSPLEEEVTEEQEDK 82 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (793)
++.+++++||+++++|+||++++||||||||||+|+|+++++++++. .|.....+.... ...|.... ..+ ...
T Consensus 339 rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~--~~~g~~~~-~~~---~~~ 412 (1053)
T TIGR01523 339 NMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFN--PNEGNVSG-IPR---FSP 412 (1053)
T ss_pred HHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCC--Cccccccc-ccc---ccc
Confidence 46788999999999999999999999999999999999999998752 221100000000 00000000 000 000
Q ss_pred cccCCCCcCchhhhcC-----CCCC---CCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCC
Q 003824 83 ASIKGFNFEDERIMNG-----SWVN---EPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGF 154 (793)
Q Consensus 83 ~~~~~~~~~~~~l~~~-----~~~~---~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~ 154 (793)
.........++++... .... ....+..++++.++++||++....++..+... ..+||+|.||+++|.+.|+
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~-~~GdptE~ALl~~a~~~g~ 491 (1053)
T TIGR01523 413 YEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK-AHGDPTEIAIHVFAKKFDL 491 (1053)
T ss_pred ccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee-eCcCccHHHHHHHHHHcCC
Confidence 0000000000000000 0000 00123567899999999998765432223222 2479999999999999997
Q ss_pred EEEe---------ecCce-eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCC-cEEEEEecCchHhHHHHh
Q 003824 155 EFYE---------RTQTS-ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEG-TLLLLSKGADSVMFERLA 223 (793)
Q Consensus 155 ~~~~---------r~~~~-~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~l~~KGa~~~i~~~~~ 223 (793)
.... +.+.. ..+..... ++....|++++.+||||+|||||++++++++ ++++|+|||||.|+++|+
T Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~ 568 (1053)
T TIGR01523 492 PHNALTGEEDLLKSNENDQSSLSQHNE---KPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCS 568 (1053)
T ss_pred Ccccccchhhhhhhccccccccccccc---cccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhh
Confidence 4210 00000 00110000 0112568999999999999999999997654 589999999999999997
Q ss_pred hc-----------chhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcC
Q 003824 224 EN-----------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKN 292 (793)
Q Consensus 224 ~~-----------~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~ 292 (793)
.. +++.++.+.+.+++|+++|+|||++|||.++.+++..+ .+.. .. .+ .+.+|+|
T Consensus 569 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~-~~--------~~~~e~~ 634 (1053)
T TIGR01523 569 SSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ET-LN--------RATAESD 634 (1053)
T ss_pred HhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc---cc-cc--------hhhhccC
Confidence 42 23456778889999999999999999999987543211 0100 00 01 2457899
Q ss_pred ceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHH
Q 003824 293 LILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAA 372 (793)
Q Consensus 293 l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 372 (793)
|+|+|+++++||+|++++++|+.|+++||+|||+|||++.||.+||+++||+..+.. ....
T Consensus 635 L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~---~~~~---------------- 695 (1053)
T TIGR01523 635 LEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI---HDRD---------------- 695 (1053)
T ss_pred CEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc---cccc----------------
Confidence 999999999999999999999999999999999999999999999999999864311 0000
Q ss_pred HHHHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc
Q 003824 373 AAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK 452 (793)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~ 452 (793)
......+++|..++.+.++++.+.. . ...||||++|+||.++|+.+|+
T Consensus 696 -------------------------~~~~~~vitG~~l~~l~~~~l~~~~----~--~~~V~ar~sP~~K~~iV~~lq~- 743 (1053)
T TIGR01523 696 -------------------------EIMDSMVMTGSQFDALSDEEVDDLK----A--LCLVIARCAPQTKVKMIEALHR- 743 (1053)
T ss_pred -------------------------ccccceeeehHHhhhcCHHHHHHHh----h--cCeEEEecCHHHHHHHHHHHHh-
Confidence 0011358999999877655544332 2 3469999999999999999998
Q ss_pred CCCeEEEEcCCccChhhhhhcceeEEec--cCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHH
Q 003824 453 TSSTTLAIGDGANDVGMLQEADIGVGIS--GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNI 528 (793)
Q Consensus 453 ~~~~vlaiGDG~ND~~ml~~AdvGI~i~--g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~ 528 (793)
.|++|+|+|||+||+|||++|||||+|+ |++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.|.+++|+
T Consensus 744 ~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l~~ni 820 (1053)
T TIGR01523 744 RKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSDDNFASILNA-IEEGRRMFDNIMKFVLHLLAENV 820 (1053)
T ss_pred cCCeeEEeCCCcchHHHHHhCCccEecCCCccHH--HHHhcCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH
Confidence 7999999999999999999999999984 4554 89999999998 7779998 89999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccCcc--cchhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHH
Q 003824 529 AFGFTLFFFEAYASFSGQP--VYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWA 606 (793)
Q Consensus 529 ~~~~~~~~~~~~~~~s~~~--~~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~ 606 (793)
..+++.+++.++..++|.+ +++++|++|+|++++.+|++++++++ ++++.|.+.|+ .+...++++.++..++
T Consensus 821 ~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~--~~~~~m~~~Pr----~~~~~l~~~~~~~~~~ 894 (1053)
T TIGR01523 821 AEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEK--AAPDLMDRLPH----DNEVGIFQKELIIDMF 894 (1053)
T ss_pred HHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCC--CChhHHhcCCC----CCCccccCHHHHHHHH
Confidence 9999999999988777764 58899999999999999999999853 45555555555 5667899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcc---ccccCC-----Cce-eehhhHHHHHHHHHHHHHHHHHHHHhcc-----hh-------
Q 003824 607 LNGVANAAIIFFFCIHAMKQ---QAFRKG-----GEV-IGLEILGTTMYTCVVWVVNCQMALSVTY-----FT------- 665 (793)
Q Consensus 607 ~~~~~~~~~~f~~~~~~~~~---~~~~~~-----g~~-~~~~~~~t~~f~~~v~~~~~~~~l~~~~-----~~------- 665 (793)
+.|++.+++.+..+++.+.. +..... +.. .+.....|++|+++++.+.+..+. .++ |.
T Consensus 895 ~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~-~r~~~~~~~~~~~~~~~ 973 (1053)
T TIGR01523 895 AYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVE-VKDFDNSFFNLHGIPDG 973 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHH-HhcCchhhhhcCccccc
Confidence 99999998887666543221 000000 000 123345677777777766655432 111 11
Q ss_pred ----------hHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003824 666 ----------YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMR 735 (793)
Q Consensus 666 ----------~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~ 735 (793)
.+.|.++++++++.++++++..|+|+ ++.. +|++.++++ .|+.++.++++.++..++.|+++|+
T Consensus 974 ~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~-~~~~----~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~ 1047 (1053)
T TIGR01523 974 DSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPV-INDD----VFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRR 1047 (1053)
T ss_pred cccccccccCCccCHHHHHHHHHHHHHHHHHHhhhh-hhhh----hhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 24688899999999999999999996 3321 566778886 8998989999999999999998876
Q ss_pred h
Q 003824 736 F 736 (793)
Q Consensus 736 ~ 736 (793)
+
T Consensus 1048 ~ 1048 (1053)
T TIGR01523 1048 L 1048 (1053)
T ss_pred c
Confidence 6
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-83 Score=699.80 Aligned_cols=567 Identities=23% Similarity=0.328 Sum_probs=455.9
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
+|-+.+++||.++++|++|..+.||||||||||.|+|++.+.++++..|..+... .
T Consensus 415 kMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~-~----------------------- 470 (1034)
T KOG0204|consen 415 KMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPK-S----------------------- 470 (1034)
T ss_pred HHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcc-c-----------------------
Confidence 4556789999999999999999999999999999999999999998877532211 0
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
..-.......++..++...+-....++..+...-+.|||+|.||+.++..+|..+..
T Consensus 471 ------------------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~----- 527 (1034)
T KOG0204|consen 471 ------------------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD----- 527 (1034)
T ss_pred ------------------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh-----
Confidence 001122334455555554444443434444334456899999999999999987755
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhc----------chhhHHHH
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN----------GREFEEQT 233 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~~ 233 (793)
++...++++++||+|.||||+++++.+++..++|+|||.|.|+..|... +++.+..+
T Consensus 528 -------------~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~ 594 (1034)
T KOG0204|consen 528 -------------VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSF 594 (1034)
T ss_pred -------------hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHH
Confidence 2356678899999999999999999988772399999999999999874 34566688
Q ss_pred HHHHHHHHhccceEEEEEEEecCHH--HHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHH
Q 003824 234 KEHINEYADAGLRTLILAYRELDEK--EYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPE 311 (793)
Q Consensus 234 ~~~~~~~~~~G~r~l~~a~k~l~~~--~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~ 311 (793)
++.++.||.+|+||+|+|||+.... +-.+|.. .+..+.+|+++|++||+||.||||++
T Consensus 595 ~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~--------------------~~~~~~~lt~laivGIkDPvRPgV~~ 654 (1034)
T KOG0204|consen 595 KDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN--------------------EELPEGGLTLLAIVGIKDPVRPGVPE 654 (1034)
T ss_pred HHHHHHHHHhhhheeeEEeeccccCCCCCCCccc--------------------cccCCCCeEEEEEeeccCCCCCCcHH
Confidence 9999999999999999999996443 1111211 13457899999999999999999999
Q ss_pred HHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhcc
Q 003824 312 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 391 (793)
Q Consensus 312 ~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (793)
+|+.|+.|||.|.|+||||..||.+||.+|||++++..
T Consensus 655 AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d------------------------------------------ 692 (1034)
T KOG0204|consen 655 AVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD------------------------------------------ 692 (1034)
T ss_pred HHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc------------------------------------------
Confidence 99999999999999999999999999999999987643
Q ss_pred ccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhh
Q 003824 392 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 471 (793)
Q Consensus 392 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~ 471 (793)
.++++|++++...+++..+...++. |.+|.+|.+|..+|+.+++ .|++|+..|||.||+|+|+
T Consensus 693 ----------~~~lEG~eFr~~s~ee~~~i~pkl~------VlARSSP~DK~lLVk~L~~-~g~VVAVTGDGTNDaPALk 755 (1034)
T KOG0204|consen 693 ----------FLALEGKEFRELSQEERDKIWPKLR------VLARSSPNDKHLLVKGLIK-QGEVVAVTGDGTNDAPALK 755 (1034)
T ss_pred ----------cceecchhhhhcCHHHHHhhhhhhe------eeecCCCchHHHHHHHHHh-cCcEEEEecCCCCCchhhh
Confidence 2477888888777666666666553 9999999999999999998 8999999999999999999
Q ss_pred hcceeEEe--ccCCcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcc
Q 003824 472 EADIGVGI--SGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQP 547 (793)
Q Consensus 472 ~AdvGI~i--~g~~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~ 547 (793)
+||||.+| +|+|. ||++||++|.|++| +++. +.+||..|.+++|+++|.+.-|++.+.+.|..+... +.+
T Consensus 756 eADVGlAMGIaGTeV--AKEaSDIIi~DDNFssIVk~-v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~---~ds 829 (1034)
T KOG0204|consen 756 EADVGLAMGIAGTEV--AKEASDIIILDDNFSSIVKA-VKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACAT---GDS 829 (1034)
T ss_pred hcccchhccccchhh--hhhhCCeEEEcCchHHHHHH-HHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhc---CCc
Confidence 99999955 78887 99999999999666 8888 899999999999999999999999998888887665 667
Q ss_pred cchhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 003824 548 VYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQ 627 (793)
Q Consensus 548 ~~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 627 (793)
+++..|++|.|+++|.+.+++++.++ |.++.|.++|. +++.+++++.+|..++.+++||-+++|.+.+....
T Consensus 830 PLtAVQlLWVNLIMDTLgALALATep--Pt~~Lm~RkP~----GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~-- 901 (1034)
T KOG0204|consen 830 PLTAVQLLWVNLIMDTLGALALATEP--PTDELMKRKPV----GRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKS-- 901 (1034)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccCC--CChHHhcCCCC----CCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchh--
Confidence 89999999999999999999999864 66777777787 99999999999999999999999999998876432
Q ss_pred cccCCCcee-ehhhHHHHHHHHHHHHHHHHHHHHhcc------hh-hHHHHHHHHHHHHHHHHHHHHhccCccccchhHH
Q 003824 628 AFRKGGEVI-GLEILGTTMYTCVVWVVNCQMALSVTY------FT-YIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYK 699 (793)
Q Consensus 628 ~~~~~g~~~-~~~~~~t~~f~~~v~~~~~~~~l~~~~------~~-~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~ 699 (793)
.+..++... ......|++|.++|+++-+.-+. .+. +. .+.|..+.+.+...+++++++..+.. .
T Consensus 902 if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEin-aRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g---~---- 973 (1034)
T KOG0204|consen 902 IFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEIN-ARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVEFGG---A---- 973 (1034)
T ss_pred hhccCCCCCCchhhheeeehhHHHHHHHHHHHh-hcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhhhcC---c----
Confidence 232333321 23356688888888877666542 222 11 23455555566677777777665542 2
Q ss_pred HHHHHhccChHHHHHHHHHHHHHHHHHHHHHHH
Q 003824 700 VFIEACAPAPSFWLITLLVLMSSLLPYFTYSAI 732 (793)
Q Consensus 700 ~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~ 732 (793)
+|++.++++..|++++++.++.++...+.|.+
T Consensus 974 -~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 974 -FFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred -ceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 56688999999999999999999888888766
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-79 Score=739.63 Aligned_cols=609 Identities=21% Similarity=0.237 Sum_probs=457.8
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
+.++++++|+++++|+||++++||||||||||+|+|+|.+++..+..+.... . ..
T Consensus 270 m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-~------------------------~~ 324 (917)
T TIGR01116 270 MAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLN-E------------------------FC 324 (917)
T ss_pred HHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccc-e------------------------EE
Confidence 4578999999999999999999999999999999999999988764321000 0 00
Q ss_pred cCCCCcC--chhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCc
Q 003824 85 IKGFNFE--DERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQT 162 (793)
Q Consensus 85 ~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~ 162 (793)
..+..+. +..+.+.........+..++++.++++||++.+..++..+.++. .+||+|.||++++++.|+....+...
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~-~gdp~E~ALl~~~~~~g~~~~~~~~~ 403 (917)
T TIGR01116 325 VTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEK-VGEATEAALKVLVEKMGLPATKNGVS 403 (917)
T ss_pred ecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceee-ccChhHHHHHHHHHHcCCCchhcccc
Confidence 0000000 00000000001112345678899999999987754332232222 47999999999999999877655444
Q ss_pred eeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhc----------chhhHHH
Q 003824 163 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN----------GREFEEQ 232 (793)
Q Consensus 163 ~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~~ 232 (793)
.+.....+.. ...+..|++++.+||||+||||||++++ ++++.+|+|||||.|+++|+.. +++.+++
T Consensus 404 ~~~~~~~~~~--~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~ 480 (917)
T TIGR01116 404 SKRRPALGCN--SVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNT 480 (917)
T ss_pred cccccccchh--HHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHH
Confidence 3333221110 0123568899999999999999999997 4678999999999999999742 2345677
Q ss_pred HHHHHHHHHh-ccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHH
Q 003824 233 TKEHINEYAD-AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPE 311 (793)
Q Consensus 233 ~~~~~~~~~~-~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~ 311 (793)
+.+++++|++ +|+|||++|||.+++++... . . .+ ....+.+|+||+|+|+++++||+|+++++
T Consensus 481 i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~-~---------~-~~-----~~~~~~~e~~l~~lGl~~~~Dplr~~v~e 544 (917)
T TIGR01116 481 ILSVIKEMGTTKALRCLALAFKDIPDPREED-L---------L-SD-----PANFEAIESDLTFIGVVGMLDPPRPEVAD 544 (917)
T ss_pred HHHHHHHHHhhcCCeEEEEEEEECCcccccc-c---------c-cc-----chhhhhhcCCcEEEEEeeeeCCCchhHHH
Confidence 8899999999 99999999999997643210 0 0 01 01235689999999999999999999999
Q ss_pred HHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhcc
Q 003824 312 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 391 (793)
Q Consensus 312 ~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (793)
+|+.|+++||++||+|||+.+||.++|+++|+..++....
T Consensus 545 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~---------------------------------------- 584 (917)
T TIGR01116 545 AIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVT---------------------------------------- 584 (917)
T ss_pred HHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcccc----------------------------------------
Confidence 9999999999999999999999999999999976442210
Q ss_pred ccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhh
Q 003824 392 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 471 (793)
Q Consensus 392 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~ 471 (793)
...++|+.+..+.+++... ..++.+||||++|+||.++|+.+|+ .|++|+|+|||+||++||+
T Consensus 585 ----------~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~va~iGDG~ND~~alk 647 (917)
T TIGR01116 585 ----------FKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSHKSELVELLQE-QGEIVAMTGDGVNDAPALK 647 (917)
T ss_pred ----------ceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHHHHHHHHHHHh-cCCeEEEecCCcchHHHHH
Confidence 1245666655443322221 2345679999999999999999997 8999999999999999999
Q ss_pred hcceeEEec-cCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCccc
Q 003824 472 EADIGVGIS-GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPV 548 (793)
Q Consensus 472 ~AdvGI~i~-g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~ 548 (793)
+|||||+|+ |++. |+++||+++.+ |+.+.++ +.|||++|.|+++++.|.+++|+..+++++++.++. ...+
T Consensus 648 ~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~p 721 (917)
T TIGR01116 648 KADIGIAMGSGTEV--AKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALG---IPEG 721 (917)
T ss_pred hCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHc---CCch
Confidence 999999994 4444 88999999999 7889999 799999999999999999999999999999988763 2257
Q ss_pred chhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 003824 549 YNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQA 628 (793)
Q Consensus 549 ~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 628 (793)
|+++|++|+|++++.+|++++++++ ++++.+.++|+ .++++++++++++.|++.|+++++++++.+++.+...+
T Consensus 722 l~~~qll~inli~d~lp~~~l~~~~--~~~~~m~~pP~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 795 (917)
T TIGR01116 722 LIPVQLLWVNLVTDGLPATALGFNP--PDKDIMWKPPR----RPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTH 795 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC--cchhHhcCCCC----CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999865 34555555565 56789999999999999999999987766554332101
Q ss_pred c-cC-----------CCce----eehhhHHHHHHHHHHHHHHHHHHHHhcc-----h--hhHHHHHHHHHHHHHHHHHHH
Q 003824 629 F-RK-----------GGEV----IGLEILGTTMYTCVVWVVNCQMALSVTY-----F--TYIQHLFIWGGITFWYIFLLA 685 (793)
Q Consensus 629 ~-~~-----------~g~~----~~~~~~~t~~f~~~v~~~~~~~~l~~~~-----~--~~~~~~~i~~si~~~~i~~~i 685 (793)
+ .. ++.. .+.....|++|+++++.+.++.+. .++ | ..+.|.++|+++++.++++++
T Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~-~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~ 874 (917)
T TIGR01116 796 FTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALN-ALSEDQSLLRMPPWVNKWLIGAICLSMALHFL 874 (917)
T ss_pred cccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHH-HcCCcccccccCCccCHHHHHHHHHHHHHHHH
Confidence 1 00 1100 012345688888888877777542 222 2 124678899999999999998
Q ss_pred HhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003824 686 YGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQM 734 (793)
Q Consensus 686 ~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~ 734 (793)
..++|+ ++. +|+..++++..|+++++++++.++.+++.|+++|
T Consensus 875 ~~~v~~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 875 ILYVPF-LSR-----IFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHhHH-HHH-----HhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 888885 454 7888999999999999999999999999998763
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-79 Score=737.08 Aligned_cols=609 Identities=19% Similarity=0.201 Sum_probs=459.6
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
+.+++++||+++++|+||++++||+|||||||+|+|+|.++++++..|..+..+. .
T Consensus 325 m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~-----------~------------- 380 (997)
T TIGR01106 325 MARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTED-----------Q------------- 380 (997)
T ss_pred HHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccC-----------C-------------
Confidence 4578999999999999999999999999999999999999999887765321100 0
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCC--CceeeecCCccHHHHHHHHHHcCCEEEeecCc
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEEN--GKISYEAESPDEAAFVIAARELGFEFYERTQT 162 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~--~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~ 162 (793)
.+.. ........+.++.++++||++.+..+... -.-.+..+||+|.||++++...+.....
T Consensus 381 -~~~~------------~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~---- 443 (997)
T TIGR01106 381 -SGVS------------FDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVME---- 443 (997)
T ss_pred -CCcc------------CCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHH----
Confidence 0000 00122345678899999999876533211 0012446899999999999865432110
Q ss_pred eeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcC---CCcEEEEEecCchHhHHHHhhc---------chhhH
Q 003824 163 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE---EGTLLLLSKGADSVMFERLAEN---------GREFE 230 (793)
Q Consensus 163 ~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~ 230 (793)
.+..|++++.+||||+||||+++++.. ++++++|+|||||.|+++|+.. +++.+
T Consensus 444 --------------~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~ 509 (997)
T TIGR01106 444 --------------MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELK 509 (997)
T ss_pred --------------HHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHH
Confidence 125688899999999999999998743 2468999999999999999742 23456
Q ss_pred HHHHHHHHHHHhccceEEEEEEEecCHHHHHH-HHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCCh
Q 003824 231 EQTKEHINEYADAGLRTLILAYRELDEKEYKQ-FNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGV 309 (793)
Q Consensus 231 ~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~-~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v 309 (793)
+.+.+.+++++++|+|||++|||.++++++.+ |.. +++ ..+..|+||+|+|+++++||+|+++
T Consensus 510 ~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~-----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v 573 (997)
T TIGR01106 510 EAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQF-----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAV 573 (997)
T ss_pred HHHHHHHHHHHhcCCEEEEEEEeecCcccccccccc-----------cch-----hhhccccCcEEEEEEeccCCChHHH
Confidence 77888999999999999999999998765432 110 111 1134589999999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhh
Q 003824 310 PECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKE 389 (793)
Q Consensus 310 ~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (793)
+++|+.|+++||++||+|||+..||.++|+++|++.++... . .++ ..++....+
T Consensus 574 ~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~-------~--~~i-----------------~~~~~~~~~ 627 (997)
T TIGR01106 574 PDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNET-------V--EDI-----------------AARLNIPVS 627 (997)
T ss_pred HHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccc-------h--hhh-----------------hhhcccccc
Confidence 99999999999999999999999999999999998764321 0 000 000000000
Q ss_pred ccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhh
Q 003824 390 LLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGM 469 (793)
Q Consensus 390 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~m 469 (793)
.. ++.....++++|+.++.+.++++ .++...++.+||||++|+||.+||+.+|+ .|++|+|+|||+||+||
T Consensus 628 ~~----~~~~~~~~vi~G~~l~~l~~~el----~~~~~~~~~~VfaR~sPeqK~~IV~~lq~-~g~vv~~~GDG~ND~pa 698 (997)
T TIGR01106 628 QV----NPRDAKACVVHGSDLKDMTSEQL----DEILKYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPA 698 (997)
T ss_pred cc----ccccccceEEEhHHhhhCCHHHH----HHHHHhcCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHH
Confidence 00 01112347999999987766544 44445566689999999999999999998 89999999999999999
Q ss_pred hhhcceeEEec--cCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccC
Q 003824 470 LQEADIGVGIS--GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSG 545 (793)
Q Consensus 470 l~~AdvGI~i~--g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~ 545 (793)
|++|||||+|+ |+++ |+++||+++.+ |..+.++ +.|||.+|.|+++++.|.+++|+..+++.+++.++..
T Consensus 699 Lk~AdVGiamg~~G~~v--ak~aADivL~dd~f~~Iv~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~--- 772 (997)
T TIGR01106 699 LKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANI--- 772 (997)
T ss_pred HhhCCcceecCCcccHH--HHHhhceEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC---
Confidence 99999999884 5666 89999999999 6669998 9999999999999999999999999999999988753
Q ss_pred cccchhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHH-HHHHHHHHHHHHHHHHHh
Q 003824 546 QPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWA-LNGVANAAIIFFFCIHAM 624 (793)
Q Consensus 546 ~~~~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~-~~~~~~~~~~f~~~~~~~ 624 (793)
..+++++|++|+|++++++|+++++.++ ++++.|.++|+ ..+...++++.++..|+ ..|++++++.|+.+++.+
T Consensus 773 ~~pl~~~qlL~inli~d~lp~~al~~e~--~~~~~m~~~P~---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 847 (997)
T TIGR01106 773 PLPLGTITILCIDLGTDMVPAISLAYEK--AESDIMKRQPR---NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVIL 847 (997)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhcCC--CCcccccCCCc---CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468899999999999999999999854 56666667776 22467889998887765 569999988887776544
Q ss_pred ccccc------cC---------CCc--ee-----------ehhhHHHHHHHHHHHHHHHHHHH-Hhcchh----hHHHHH
Q 003824 625 KQQAF------RK---------GGE--VI-----------GLEILGTTMYTCVVWVVNCQMAL-SVTYFT----YIQHLF 671 (793)
Q Consensus 625 ~~~~~------~~---------~g~--~~-----------~~~~~~t~~f~~~v~~~~~~~~l-~~~~~~----~~~~~~ 671 (793)
...++ .. ++. .. ....+.|++|+++++++.+..+. ++...+ .+.|..
T Consensus 848 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~ 927 (997)
T TIGR01106 848 AENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKI 927 (997)
T ss_pred hhcCCccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHH
Confidence 21110 00 000 00 00146788888888887777652 222212 146778
Q ss_pred HHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003824 672 IWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRF 736 (793)
Q Consensus 672 i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~ 736 (793)
+++++++.++++++..++|+ ++. +|+..++++..|+.++.++++.++..++.|+++|++
T Consensus 928 l~~~~~~~~~l~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 928 LIFGLFEETALAAFLSYCPG-MGV-----ALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHHHHhhh-hHH-----HhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88888888888888888885 455 788889999999999999999999999999888764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-77 Score=717.73 Aligned_cols=560 Identities=23% Similarity=0.297 Sum_probs=435.2
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.++++++|+++++|+||++++||||||||||+|+|++.+++..+..+..+..
T Consensus 356 ~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~-------------------------- 409 (941)
T TIGR01517 356 KMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDV-------------------------- 409 (941)
T ss_pred HHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcc--------------------------
Confidence 456789999999999999999999999999999999999999876654432100
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
.. ..++...+++...+.||+..+...++.+. .+..+||+|.||++++++.|.....
T Consensus 410 ------------~~------~~~~~~~~~l~~~~~~~s~~~~~~~~~~~-~~~~g~p~e~All~~~~~~~~~~~~----- 465 (941)
T TIGR01517 410 ------------LR------NVPKHVRNILVEGISLNSSSEEVVDRGGK-RAFIGSKTECALLGFLLLLGRDYQE----- 465 (941)
T ss_pred ------------cc------cCCHHHHHHHHHHHHhCCCCccccCCCCc-cccCCCccHHHHHHHHHHcCCCHHH-----
Confidence 00 00122445555556666554432211121 2456899999999999987743211
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhc----ch-----hhHHHHH
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN----GR-----EFEEQTK 234 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~----~~-----~~~~~~~ 234 (793)
.+..|++++.+||+|+||||+++++.+++++++|+|||||.|+++|+.. +. +.++++.
T Consensus 466 -------------~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~ 532 (941)
T TIGR01517 466 -------------VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCA 532 (941)
T ss_pred -------------HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHH
Confidence 1135678889999999999999999877889999999999999999752 10 1356788
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHH
Q 003824 235 EHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECID 314 (793)
Q Consensus 235 ~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~ 314 (793)
+.+++++.+|+||+++|||+++.+++..| +..|+||+|+|+++++||+|++++++|+
T Consensus 533 ~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~-----------------------~~~e~~l~~lGli~~~Dplr~~~~~aI~ 589 (941)
T TIGR01517 533 DVIEPLASDALRTICLAYRDFAPEEFPRK-----------------------DYPNGGLTLIGVVGIKDPLRPGVREAVQ 589 (941)
T ss_pred HHHHHHHhcCCEEEEEEEEecCccccccc-----------------------cccccCcEEEEEeeccCCCchhHHHHHH
Confidence 89999999999999999999876543211 2347899999999999999999999999
Q ss_pred HHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccc
Q 003824 315 KLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSS 394 (793)
Q Consensus 315 ~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (793)
.|+++||++||+|||++.||.+||++|||.+++.
T Consensus 590 ~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~---------------------------------------------- 623 (941)
T TIGR01517 590 ECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG---------------------------------------------- 623 (941)
T ss_pred HHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc----------------------------------------------
Confidence 9999999999999999999999999999976431
Q ss_pred cCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcc
Q 003824 395 NESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 474 (793)
Q Consensus 395 ~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~Ad 474 (793)
.+++|+.+..+.++++.+... +..||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++||
T Consensus 624 --------~vi~G~~~~~l~~~el~~~i~------~~~Vfar~sPe~K~~iV~~lq~-~g~vVam~GDGvNDapALk~Ad 688 (941)
T TIGR01517 624 --------LAMEGKEFRRLVYEEMDPILP------KLRVLARSSPLDKQLLVLMLKD-MGEVVAVTGDGTNDAPALKLAD 688 (941)
T ss_pred --------eEeeHHHhhhCCHHHHHHHhc------cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCCchHHHHHhCC
Confidence 267777776655544444332 4469999999999999999998 8999999999999999999999
Q ss_pred eeEEec--cCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccch
Q 003824 475 IGVGIS--GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYN 550 (793)
Q Consensus 475 vGI~i~--g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~ 550 (793)
|||+|+ |++. |+++||+++.+ |+.+.++ +.|||++|.|+++++.|.+++|+..+++.+++.++.+ ..+++
T Consensus 689 VGIAmg~~gtdv--Ak~aADivL~dd~f~~I~~~-i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~---~~pl~ 762 (941)
T TIGR01517 689 VGFSMGISGTEV--AKEASDIILLDDNFASIVRA-VKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISS---TSPLT 762 (941)
T ss_pred cceecCCCccHH--HHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccHH
Confidence 999984 5555 99999999995 6669999 7999999999999999999999999999988877753 45799
Q ss_pred hHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 003824 551 DWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFR 630 (793)
Q Consensus 551 ~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 630 (793)
++|++|+|++++++|+++++.+ ++++.++++|+ +.+..+++++.++..++.+|+++++++|+++++... .+.
T Consensus 763 ~~qil~inl~~d~~~al~l~~e---~~~~~lm~~~P---~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~ 834 (941)
T TIGR01517 763 AVQLLWVNLIMDTLAALALATE---PPTEALLDRKP---IGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFD 834 (941)
T ss_pred HHHHHHHHHHHHHhhHHHHccC---CccHHHHhCCC---CCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhc
Confidence 9999999999999999999864 45555665555 256678899999999999999999998877665321 110
Q ss_pred CCC----ceeehhhHHHHHHHHHHHHHHHHHHHH-hc----ch-hhHHHHHHHHHHHHHHHHHHHHhccCccccchhHHH
Q 003824 631 KGG----EVIGLEILGTTMYTCVVWVVNCQMALS-VT----YF-TYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKV 700 (793)
Q Consensus 631 ~~g----~~~~~~~~~t~~f~~~v~~~~~~~~l~-~~----~~-~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~ 700 (793)
..+ .........|++|.++++.+.++.+.. +. .| .++.|.++|+++++.+++++++..+ ++.
T Consensus 835 ~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~---~~~----- 906 (941)
T TIGR01517 835 VSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEF---GGS----- 906 (941)
T ss_pred ccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHH---HHH-----
Confidence 111 000123456888888888777776532 11 12 2356778888888888877665532 233
Q ss_pred HHHHhccChHHHHHHHHHHHHHHHHHHHHHHH
Q 003824 701 FIEACAPAPSFWLITLLVLMSSLLPYFTYSAI 732 (793)
Q Consensus 701 ~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~ 732 (793)
+|+..++++..|+.+++++++.++..++.|++
T Consensus 907 ~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 907 FFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77788999999999999999888888888775
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-73 Score=679.75 Aligned_cols=559 Identities=20% Similarity=0.242 Sum_probs=435.0
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCC-CccHHHHHHHhhcCCCCccchhhhhhcc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGR-GVTEVERAMARRKGSPLEEEVTEEQEDK 82 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (793)
++.++++++|+++++|+||++++||||||||||+|+|++.+++..+..+.. .... .+
T Consensus 304 r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~------------~~---------- 361 (884)
T TIGR01522 304 RMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVS------------LN---------- 361 (884)
T ss_pred HHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCc------------cC----------
Confidence 456789999999999999999999999999999999999999876543210 0000 00
Q ss_pred cccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCc
Q 003824 83 ASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQT 162 (793)
Q Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~ 162 (793)
..+....+++ ......++.+.+++.+.++||++..+..+ +. ..+||+|.||++++++.|+...
T Consensus 362 -~~~~~~~~~~------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~--~~---~~g~p~e~All~~~~~~~~~~~----- 424 (884)
T TIGR01522 362 -QFGEVIVDGD------VLHGFYTVAVSRILEAGNLCNNAKFRNEA--DT---LLGNPTDVALIELLMKFGLDDL----- 424 (884)
T ss_pred -CCCccccccc------ccccccCHHHHHHHHHHhhhCCCeecCCC--CC---cCCChHHHHHHHHHHHcCcHhH-----
Confidence 0000000000 00111234567888999999998654322 11 1369999999999998875311
Q ss_pred eeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcC-CCcEEEEEecCchHhHHHHhhc----------chhhHH
Q 003824 163 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE-EGTLLLLSKGADSVMFERLAEN----------GREFEE 231 (793)
Q Consensus 163 ~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~----------~~~~~~ 231 (793)
+..|+.++.+||+|+||||+++++.+ ++++++|+|||||.|+++|... +++.++
T Consensus 425 ---------------~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~ 489 (884)
T TIGR01522 425 ---------------RETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRD 489 (884)
T ss_pred ---------------HhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHH
Confidence 14577889999999999999999874 5678999999999999999752 123456
Q ss_pred HHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHH
Q 003824 232 QTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPE 311 (793)
Q Consensus 232 ~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~ 311 (793)
.+.+.+++++.+|+||+++|||.+ +.+|+|+|+++++||+|+++++
T Consensus 490 ~i~~~~~~~a~~G~rvl~~A~~~~----------------------------------~~~l~~lGli~l~Dp~r~~~~~ 535 (884)
T TIGR01522 490 VIQEEAAEMASAGLRVIAFASGPE----------------------------------KGQLTFLGLVGINDPPRPGVKE 535 (884)
T ss_pred HHHHHHHHHHhcCCEEEEEEEEcC----------------------------------CCCeEEEEEEeccCcchhHHHH
Confidence 778888999999999999999865 2589999999999999999999
Q ss_pred HHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhcc
Q 003824 312 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 391 (793)
Q Consensus 312 ~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (793)
+|+.|+++||+++|+|||+.+||.++|+++||......
T Consensus 536 ~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~------------------------------------------ 573 (884)
T TIGR01522 536 AVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ------------------------------------------ 573 (884)
T ss_pred HHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc------------------------------------------
Confidence 99999999999999999999999999999999754321
Q ss_pred ccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhh
Q 003824 392 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 471 (793)
Q Consensus 392 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~ 471 (793)
+++|+.++...++++.+.+. +..||||++|+||..+|+.+|+ .|++|+|+|||.||+|||+
T Consensus 574 ------------~v~g~~l~~~~~~~l~~~~~------~~~Vfar~~P~~K~~iv~~lq~-~g~~v~mvGDGvND~pAl~ 634 (884)
T TIGR01522 574 ------------SVSGEKLDAMDDQQLSQIVP------KVAVFARASPEHKMKIVKALQK-RGDVVAMTGDGVNDAPALK 634 (884)
T ss_pred ------------eeEhHHhHhCCHHHHHHHhh------cCeEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHH
Confidence 45666665544444433322 4559999999999999999998 8999999999999999999
Q ss_pred hcceeEEeccCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccc
Q 003824 472 EADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVY 549 (793)
Q Consensus 472 ~AdvGI~i~g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~ 549 (793)
+|||||+|+......|+++||+++.+ |..+.++ +.+||.+|.|+++++.|.++.|+..+++.+++.++. ...++
T Consensus 635 ~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~-i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl 710 (884)
T TIGR01522 635 LADIGVAMGQTGTDVAKEAADMILTDDDFATILSA-IEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMG---FPNPL 710 (884)
T ss_pred hCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc---CCCch
Confidence 99999999422222277999999977 6668888 899999999999999999999999888877666653 34579
Q ss_pred hhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 003824 550 NDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAF 629 (793)
Q Consensus 550 ~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 629 (793)
+++|++|+|++++.+|+++++.++ ++++.+.++|+ +++++++++.++..++++|++++++.++++++.+..
T Consensus 711 ~~~qiL~inl~~d~~~a~~l~~e~--~~~~~m~~~P~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--- 781 (884)
T TIGR01522 711 NAMQILWINILMDGPPAQSLGVEP--VDKDVMRKPPR----PRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD--- 781 (884)
T ss_pred hHHHHHHHHHHHHhhHHHHhccCC--CChhHhhCCCC----CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC---
Confidence 999999999999999999999743 45555555565 677899999999999999999998877665543321
Q ss_pred cCCCceeehhhHHHHHHHHHHHHHHHHHHHHhcc-----h--hhHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHH
Q 003824 630 RKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTY-----F--TYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFI 702 (793)
Q Consensus 630 ~~~g~~~~~~~~~t~~f~~~v~~~~~~~~l~~~~-----~--~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~ 702 (793)
+.. .....|++|+++++.+.++.+. .++ | .++.|.++|+++++.++++++..++|+ ++. +|
T Consensus 782 ---~~~--~~~~~t~~f~~~v~~q~~~~~~-~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~-~~~-----~f 849 (884)
T TIGR01522 782 ---GVI--TARDTTMTFTCFVFFDMFNALA-CRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPP-LQS-----VF 849 (884)
T ss_pred ---Ccc--hhhHHHHHHHHHHHHHHHHHHH-HccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHH-HHH-----HH
Confidence 111 1134577777777777666542 222 2 235688999999999999998888885 444 78
Q ss_pred HHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003824 703 EACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRF 736 (793)
Q Consensus 703 ~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~ 736 (793)
+..++++..|+.+++++++.++..++.|+++|.+
T Consensus 850 ~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 850 QTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8889999999999999999999999999988654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-70 Score=670.72 Aligned_cols=573 Identities=20% Similarity=0.229 Sum_probs=401.2
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.+++++||+++.+|.||+|+++|||||||||+|+|+|.+++..+...... . .
T Consensus 428 rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~-~------------~------------- 481 (1054)
T TIGR01657 428 RLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFL-K------------I------------- 481 (1054)
T ss_pred HHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccc-c------------c-------------
Confidence 3467899999999999999999999999999999999999987643210000 0 0
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEe-ecCc
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYE-RTQT 162 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~-r~~~ 162 (793)
. ..........+..++++||++.... + + ..|||+|.|+++++ |+.+.. ....
T Consensus 482 -----------~------~~~~~~~~~~~~~~~a~C~~~~~~~----~--~-~~Gdp~E~al~~~~---~~~~~~~~~~~ 534 (1054)
T TIGR01657 482 -----------V------TEDSSLKPSITHKALATCHSLTKLE----G--K-LVGDPLDKKMFEAT---GWTLEEDDESA 534 (1054)
T ss_pred -----------c------ccccccCchHHHHHHHhCCeeEEEC----C--E-EecCHHHHHHHHhC---CCEEECCCCcc
Confidence 0 0000012235677899999986542 2 1 35799999999975 555433 1110
Q ss_pred ---e--eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCC-CcEEEEEecCchHhHHHHhhcchhhHHHHHHH
Q 003824 163 ---S--ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE-GTLLLLSKGADSVMFERLAENGREFEEQTKEH 236 (793)
Q Consensus 163 ---~--~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~ 236 (793)
. ..+...+ ....+++++.+||+|+||||||+++.++ +++++|+|||||.|+++|.+. ..++++.+.
T Consensus 535 ~~~~~~~~i~~~~------~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~--~~p~~~~~~ 606 (1054)
T TIGR01657 535 EPTSILAVVRTDD------PPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE--TVPSDYQEV 606 (1054)
T ss_pred cccccccceeccC------CCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc--CCChhHHHH
Confidence 0 0011000 1257999999999999999999999864 568899999999999999864 356788899
Q ss_pred HHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHH
Q 003824 237 INEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKL 316 (793)
Q Consensus 237 ~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L 316 (793)
+++|+.+|+|||++|||++++.+.+++.+ .+| +.+|+||+|+|+++++||+|++++++|+.|
T Consensus 607 ~~~~a~~G~RVLalA~k~l~~~~~~~~~~----------~~r--------~~~E~~L~flGli~~~d~lr~~~~~~I~~l 668 (1054)
T TIGR01657 607 LKSYTREGYRVLALAYKELPKLTLQKAQD----------LSR--------DAVESNLTFLGFIVFENPLKPDTKEVIKEL 668 (1054)
T ss_pred HHHHHhcCCEEEEEEEeecCccchhhhhh----------ccH--------HHHhcCceEEEEEEEecCCCccHHHHHHHH
Confidence 99999999999999999997533222110 122 568999999999999999999999999999
Q ss_pred HHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcc---cccc--hhhhHHHHHHHHHHHHHHHHhhhhhcc
Q 003824 317 AQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPES---KTLE--KSEDKSAAAAALKASVLHQLIRGKELL 391 (793)
Q Consensus 317 ~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (793)
++|||++||+|||++.||.+||++|||++++..++..+....+. ..+. ..+........ ..........
T Consensus 669 ~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-- 742 (1054)
T TIGR01657 669 KRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQ----VEIPYPLGQD-- 742 (1054)
T ss_pred HHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCcccccccc----ccccCccccc--
Confidence 99999999999999999999999999998765555443221100 0000 00000000000 0000000000
Q ss_pred ccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhh
Q 003824 392 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 471 (793)
Q Consensus 392 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~ 471 (793)
.........+.++++|+.++.+.+. ..+.+.++...++ ||||++|+||.++|+.+|+ .|++|+|+|||+||+||||
T Consensus 743 ~~~~~~~~~~~~~itG~~l~~l~~~-~~~~l~~~~~~~~--VfAR~sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~~ALK 818 (1054)
T TIGR01657 743 SVEDLLASRYHLAMSGKAFAVLQAH-SPELLLRLLSHTT--VFARMAPDQKETLVELLQK-LDYTVGMCGDGANDCGALK 818 (1054)
T ss_pred chhhhcccceEEEEEcHHHHHHHHh-hHHHHHHHHhcCe--EEEecCHHHHHHHHHHHHh-CCCeEEEEeCChHHHHHHH
Confidence 0000112356789999999876432 2234555555554 9999999999999999998 8999999999999999999
Q ss_pred hcceeEEeccCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccc
Q 003824 472 EADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVY 549 (793)
Q Consensus 472 ~AdvGI~i~g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~ 549 (793)
+|||||+|++++ |+.+|||++.+ |+.+.++ +.+||.++.++.+++.|.+..++...+..++..+ .+ .++
T Consensus 819 ~AdVGIam~~~d---as~AA~f~l~~~~~~~I~~~-I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----~~-~~l 889 (1054)
T TIGR01657 819 QADVGISLSEAE---ASVAAPFTSKLASISCVPNV-IREGRCALVTSFQMFKYMALYSLIQFYSVSILYL----IG-SNL 889 (1054)
T ss_pred hcCcceeecccc---ceeecccccCCCcHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----cc-CcC
Confidence 999999997765 56899999886 6668888 8999999999999999998888776554443222 23 458
Q ss_pred hhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 003824 550 NDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAF 629 (793)
Q Consensus 550 ~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 629 (793)
.++|++|+|++++.+|+++++..+ +.+.++++|+ ...++++.++..++.+++++.++.++.+++....+++
T Consensus 890 ~~~Q~l~i~li~~~~~~l~l~~~~---p~~~l~~~~P------~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~ 960 (1054)
T TIGR01657 890 GDGQFLTIDLLLIFPVALLMSRNK---PLKKLSKERP------PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWY 960 (1054)
T ss_pred ccHHHHHHHHHHHHHHHHHHHcCC---chhhcCCCCC------CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 899999999999999999998753 4445555543 3689999999999999999999998888776543332
Q ss_pred cCCCc-----eeehhhHHHHHHHHHHHHHHHHHHHHhc-----chhhHHHHHHHHHHHHHHHHHH
Q 003824 630 RKGGE-----VIGLEILGTTMYTCVVWVVNCQMALSVT-----YFTYIQHLFIWGGITFWYIFLL 684 (793)
Q Consensus 630 ~~~g~-----~~~~~~~~t~~f~~~v~~~~~~~~l~~~-----~~~~~~~~~i~~si~~~~i~~~ 684 (793)
..... ........|++|... ..+.+..+...+ ..+++.|..++.++++.+++++
T Consensus 961 ~~~~~~~~~~~~~~~~~~T~~f~~~-~~~~~~~~~~~~~g~pf~~~~~~N~~~~~~~~~~~~~~~ 1024 (1054)
T TIGR01657 961 KPENPVDLEKENFPNLLNTVLFFVS-SFQYLITAIVNSKGPPFREPIYKNKPFVYLLITGLGLLL 1024 (1054)
T ss_pred cCCCCCCcccccCccHHHHHHHHHH-HHHHHHheEEEcCCcchhhhHHHhHHHHHHHHHHHHHHH
Confidence 11110 011123356666333 333333332111 1235678777777776655554
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-70 Score=656.04 Aligned_cols=534 Identities=18% Similarity=0.176 Sum_probs=400.9
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.++++++|+++++|+||++++||||||||||+|+|++.+++..+..
T Consensus 349 ~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~-------------------------------- 396 (903)
T PRK15122 349 AMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR-------------------------------- 396 (903)
T ss_pred HHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC--------------------------------
Confidence 356889999999999999999999999999999999999887521100
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
.. ++++...++|... + . ..+||.|.||++++.+.|....
T Consensus 397 ---------------------~~---~~~l~~a~l~s~~--~--~-------~~~~p~e~All~~a~~~~~~~~------ 435 (903)
T PRK15122 397 ---------------------KD---ERVLQLAWLNSFH--Q--S-------GMKNLMDQAVVAFAEGNPEIVK------ 435 (903)
T ss_pred ---------------------Ch---HHHHHHHHHhCCC--C--C-------CCCChHHHHHHHHHHHcCchhh------
Confidence 00 1233334443211 0 0 1469999999999988664210
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhc---------chhhHHHHH
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTK 234 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~ 234 (793)
...|+.+..+||+|.||||++++++++|++++++||||+.|+++|... +++.++++.
T Consensus 436 --------------~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 501 (903)
T PRK15122 436 --------------PAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLL 501 (903)
T ss_pred --------------hhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHH
Confidence 135677888999999999999999878889999999999999999752 223456677
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHH
Q 003824 235 EHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECID 314 (793)
Q Consensus 235 ~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~ 314 (793)
+.+++++.+|+||+++|||+++.++..++ ..+..|+|++|+|+++++||+|++++++|+
T Consensus 502 ~~~~~~a~~G~rvlavA~k~~~~~~~~~~---------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~ 560 (903)
T PRK15122 502 ALAEAYNADGFRVLLVATREIPGGESRAQ---------------------YSTADERDLVIRGFLTFLDPPKESAAPAIA 560 (903)
T ss_pred HHHHHHHhCCCEEEEEEEeccCccccccc---------------------cccccccCcEEEEEEeccCccHHHHHHHHH
Confidence 88899999999999999999865432100 012347899999999999999999999999
Q ss_pred HHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccc
Q 003824 315 KLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSS 394 (793)
Q Consensus 315 ~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (793)
.|+++||+++|+|||+..||.+||+++||..+.
T Consensus 561 ~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~~----------------------------------------------- 593 (903)
T PRK15122 561 ALRENGVAVKVLTGDNPIVTAKICREVGLEPGE----------------------------------------------- 593 (903)
T ss_pred HHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----------------------------------------------
Confidence 999999999999999999999999999994210
Q ss_pred cCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcc
Q 003824 395 NESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 474 (793)
Q Consensus 395 ~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~Ad 474 (793)
+++|..++.+.++++.+... .+ .||+|++|+||.++|+.+|+ .|++|+|+|||.||+|||++||
T Consensus 594 ---------vi~G~el~~~~~~el~~~v~----~~--~VfAr~sPe~K~~iV~~Lq~-~G~vVamtGDGvNDaPALk~AD 657 (903)
T PRK15122 594 ---------PLLGTEIEAMDDAALAREVE----ER--TVFAKLTPLQKSRVLKALQA-NGHTVGFLGDGINDAPALRDAD 657 (903)
T ss_pred ---------ccchHhhhhCCHHHHHHHhh----hC--CEEEEeCHHHHHHHHHHHHh-CCCEEEEECCCchhHHHHHhCC
Confidence 56677776555444444333 33 39999999999999999998 8999999999999999999999
Q ss_pred eeEEec-cCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchh
Q 003824 475 IGVGIS-GVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYND 551 (793)
Q Consensus 475 vGI~i~-g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~ 551 (793)
|||+|+ |++. |+++||+++.+ |..+..+ +.+||..|.|+++++.|.+..|+..+++.++..++. +..++.+
T Consensus 658 VGIAmg~gtdv--AkeaADiVLldd~f~~Iv~a-i~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~ 731 (903)
T PRK15122 658 VGISVDSGADI--AKESADIILLEKSLMVLEEG-VIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFI---PFLPMLA 731 (903)
T ss_pred EEEEeCcccHH--HHHhcCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---ccchhHH
Confidence 999995 3444 89999999998 4458888 899999999999999999999998888777665553 2356899
Q ss_pred HHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccC
Q 003824 552 WFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRK 631 (793)
Q Consensus 552 ~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 631 (793)
.|++|.|++++. |.++++.++ ++++.| +.|+ .++.+++++.+++ ..+.+.+.+++.|++.++.+..
T Consensus 732 ~qil~~nli~D~-~~lal~~d~--~~~~~m-~~P~----~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~----- 797 (903)
T PRK15122 732 IHLLLQNLMYDI-SQLSLPWDK--MDKEFL-RKPR----KWDAKNIGRFMLW-IGPTSSIFDITTFALMWFVFAA----- 797 (903)
T ss_pred HHHHHHHHHHHH-HHHhhcCCC--CCHhhc-CCCC----CCChhhhHHHHHH-HHHHHHHHHHHHHHHHHHHhcc-----
Confidence 999999999995 999998754 444555 7776 5667788775543 3333334444444443332221
Q ss_pred CCceeehhhHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHHHHHHHHHHhccCc-cccchhHHHHHHHhccC
Q 003824 632 GGEVIGLEILGTTMYTCVVWVVNCQMALSVTY--FTYIQHLFIWGGITFWYIFLLAYGAMDP-YISTTAYKVFIEACAPA 708 (793)
Q Consensus 632 ~g~~~~~~~~~t~~f~~~v~~~~~~~~l~~~~--~~~~~~~~i~~si~~~~i~~~i~~~i~~-~~~~~~~~~~~~~~~~s 708 (793)
|.......+.+..|+.+++.+.+.++ ..++ ..++.+...+..+++.++++++..++|+ .++. +|+..+++
T Consensus 798 -~~~~~~~~~~t~~f~~l~~~q~~~~~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~f~~~~l~ 870 (903)
T PRK15122 798 -NSVEMQALFQSGWFIEGLLSQTLVVH-MLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLGA-----MVGLEPLP 870 (903)
T ss_pred -CcHhhhhhhHHHHHHHHHHHHHHHHH-hhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHHH-----HhCCCCCC
Confidence 10000012456678888888777764 3333 2344566667777777777777777774 1233 77788999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 003824 709 PSFWLITLLVLMSSLLPYFTYS-AIQMR 735 (793)
Q Consensus 709 ~~~wl~~l~~~~~~ll~~~i~k-~~~~~ 735 (793)
+.+|++++.++++.++..++.| ++.|+
T Consensus 871 ~~~~~~~~~~~~~~~~~~e~~k~~~~r~ 898 (903)
T PRK15122 871 WSYFPWLAATLLGYCLVAQGMKRFYIRR 898 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999888888887777 44443
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-68 Score=632.72 Aligned_cols=533 Identities=17% Similarity=0.219 Sum_probs=385.6
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.+++++||+++++|+||++|+||||||||||+|+|++.++... .+.
T Consensus 351 ~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~---~~~----------------------------- 398 (902)
T PRK10517 351 KLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI---SGK----------------------------- 398 (902)
T ss_pred HHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecC---CCC-----------------------------
Confidence 356889999999999999999999999999999999999875310 000
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
. .++++...++|.... . ..+||.|.|+++++...+..
T Consensus 399 ---------------------~---~~~ll~~a~l~~~~~----~-------~~~~p~d~All~~a~~~~~~-------- 435 (902)
T PRK10517 399 ---------------------T---SERVLHSAWLNSHYQ----T-------GLKNLLDTAVLEGVDEESAR-------- 435 (902)
T ss_pred ---------------------C---HHHHHHHHHhcCCcC----C-------CCCCHHHHHHHHHHHhcchh--------
Confidence 0 123445555543321 0 13699999999998653210
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhc---------chhhHHHHH
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTK 234 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~ 234 (793)
.....|+.+..+||||+||||+++++++++.+.+++|||++.|+++|+.. +++.++.+.
T Consensus 436 ------------~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 503 (902)
T PRK10517 436 ------------SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIK 503 (902)
T ss_pred ------------hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHH
Confidence 01246777889999999999999999877888999999999999999752 223456677
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHH
Q 003824 235 EHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECID 314 (793)
Q Consensus 235 ~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~ 314 (793)
+..++++.+|+||+++|||+++.++. ++ + ...|+|++|+|+++++||+|++++++|+
T Consensus 504 ~~~~~~a~~G~rvlavA~k~~~~~~~-~~-------------~---------~~~e~~l~~lGli~~~Dp~R~~a~~aI~ 560 (902)
T PRK10517 504 RVTDTLNRQGLRVVAVATKYLPAREG-DY-------------Q---------RADESDLILEGYIAFLDPPKETTAPALK 560 (902)
T ss_pred HHHHHHHhcCCEEEEEEEecCCcccc-cc-------------c---------cccccCceeeehHhhhCcchhhHHHHHH
Confidence 88899999999999999998865321 00 0 1136899999999999999999999999
Q ss_pred HHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccc
Q 003824 315 KLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSS 394 (793)
Q Consensus 315 ~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (793)
.|+++||+|+|+|||++.||.+||+++||....
T Consensus 561 ~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~----------------------------------------------- 593 (902)
T PRK10517 561 ALKASGVTVKILTGDSELVAAKVCHEVGLDAGE----------------------------------------------- 593 (902)
T ss_pred HHHHCCCEEEEEcCCCHHHHHHHHHHcCCCccC-----------------------------------------------
Confidence 999999999999999999999999999994210
Q ss_pred cCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcc
Q 003824 395 NESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 474 (793)
Q Consensus 395 ~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~Ad 474 (793)
+++|..++.+.++++.+... .+ .||+|++|+||.++|+.+|+ .|++|+|+|||+||+|||++||
T Consensus 594 ---------v~~G~el~~l~~~el~~~~~----~~--~VfAr~sPe~K~~IV~~Lq~-~G~vVam~GDGvNDaPALk~AD 657 (902)
T PRK10517 594 ---------VLIGSDIETLSDDELANLAE----RT--TLFARLTPMHKERIVTLLKR-EGHVVGFMGDGINDAPALRAAD 657 (902)
T ss_pred ---------ceeHHHHHhCCHHHHHHHHh----hC--cEEEEcCHHHHHHHHHHHHH-CCCEEEEECCCcchHHHHHhCC
Confidence 56666666554444443333 23 39999999999999999998 8999999999999999999999
Q ss_pred eeEEeccCCcccccccCCeeecchh--hHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhH
Q 003824 475 IGVGISGVEGMQAVMSSDIAIAQFR--FLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDW 552 (793)
Q Consensus 475 vGI~i~g~~~~~a~~~aD~~i~~f~--~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~ 552 (793)
|||+|++ ....|+++||+++.+.+ .+..+ +.+||.+|.|+++++.|.+..|+..++..++..++. +..++.+.
T Consensus 658 VGIAmg~-gtdvAkeaADiVLldd~~~~I~~a-i~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~---~~~pl~~~ 732 (902)
T PRK10517 658 IGISVDG-AVDIAREAADIILLEKSLMVLEEG-VIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL---PFLPMLPL 732 (902)
T ss_pred EEEEeCC-cCHHHHHhCCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh---hhhhhHHH
Confidence 9999953 22349999999999855 48888 899999999999999999999999988888776663 22468999
Q ss_pred HHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCC
Q 003824 553 FLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKG 632 (793)
Q Consensus 553 ~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 632 (793)
|++|.|++++ +|.++++.++ ++..+|+.|+-+ +... ....++..|++.+++.+..+++.+.. ++..
T Consensus 733 qiL~inl~~D-~~~~al~~d~---~~~~~m~~p~r~----~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~ 798 (902)
T PRK10517 733 HLLIQNLLYD-VSQVAIPFDN---VDDEQIQKPQRW----NPAD----LGRFMVFFGPISSIFDILTFCLMWWV--FHAN 798 (902)
T ss_pred HHHHHHHHHH-HhHHhhcCCC---CChhhhcCCCCC----CHHH----HHHHHHHHHHHHHHHHHHHHHHHHHH--cccc
Confidence 9999999999 7999998754 344455666621 1111 22223455555554443333322111 0000
Q ss_pred CceeehhhHHHHHHHHHHHHHHHHHHH-HhcchhhHHHHHHHHHHHHHHHHHHHHhccC--ccccchhHHHHHHHhccC-
Q 003824 633 GEVIGLEILGTTMYTCVVWVVNCQMAL-SVTYFTYIQHLFIWGGITFWYIFLLAYGAMD--PYISTTAYKVFIEACAPA- 708 (793)
Q Consensus 633 g~~~~~~~~~t~~f~~~v~~~~~~~~l-~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~--~~~~~~~~~~~~~~~~~s- 708 (793)
.. .....+.+..|+.+++.+.+..+. +++...++.+...|..+++.++++++..++| + ++. +|+..+++
T Consensus 799 ~~-~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~-----~~~~~~l~~ 871 (902)
T PRK10517 799 TP-ETQTLFQSGWFVVGLLSQTLIVHMIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSP-LAS-----YLQLQALPL 871 (902)
T ss_pred ch-hhHhHHHHHHHHHHHHHHHHHHHhhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHH-HHH-----hhCCcCCCh
Confidence 00 000124445577777777776542 2222245577778888888888888878887 3 233 66677777
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003824 709 -PSFWLITLLVLMSSLLPYFTYSAIQMRF 736 (793)
Q Consensus 709 -~~~wl~~l~~~~~~ll~~~i~k~~~~~~ 736 (793)
+..|+.++.++.+ ++....-+.+.|+|
T Consensus 872 ~~~~~~~~~~~~~~-~~~e~~K~~~~~~~ 899 (902)
T PRK10517 872 SYFPWLVAILAGYM-TLTQLVKGFYSRRY 899 (902)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHhh
Confidence 5667666665555 33333333444433
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-67 Score=628.76 Aligned_cols=526 Identities=18% Similarity=0.171 Sum_probs=382.3
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.++++++|+++++|+||++++||||||||||+|+|++.++.... . .
T Consensus 316 ~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~----~-~--------------------------- 363 (867)
T TIGR01524 316 NMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSS----G-E--------------------------- 363 (867)
T ss_pred HHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCC----C-C---------------------------
Confidence 4568899999999999999999999999999999999998864110 0 0
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
..++++...++|+... . ..+||.|.|+++++.+.+...
T Consensus 364 ------------------------~~~~~l~~a~l~~~~~----~-------~~~~p~~~Al~~~~~~~~~~~------- 401 (867)
T TIGR01524 364 ------------------------TSERVLKMAWLNSYFQ----T-------GWKNVLDHAVLAKLDESAARQ------- 401 (867)
T ss_pred ------------------------CHHHHHHHHHHhCCCC----C-------CCCChHHHHHHHHHHhhchhh-------
Confidence 0123344444443321 0 135999999999987532110
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhc---------chhhHHHHH
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTK 234 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~ 234 (793)
....|+.+..+||||+||||+++++++++.+.+++||||+.|+++|+.. +++.++.+.
T Consensus 402 -------------~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 468 (867)
T TIGR01524 402 -------------TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQ 468 (867)
T ss_pred -------------HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHH
Confidence 1245677888999999999999999876678899999999999999753 223456778
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHH
Q 003824 235 EHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECID 314 (793)
Q Consensus 235 ~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~ 314 (793)
+.+++++.+|+|++++|||+++.++.+ + .+..|++|+|+|+++++||+|++++++|+
T Consensus 469 ~~~~~~a~~G~rvlavA~~~~~~~~~~-~----------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~ 525 (867)
T TIGR01524 469 DMTAEMNRQGIRVIAVATKTLKVGEAD-F----------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIA 525 (867)
T ss_pred HHHHHHHhcCCEEEEEEEeccCccccc-c----------------------cccccCCcEEEEEEEeeCCCchhHHHHHH
Confidence 888999999999999999998654310 0 01236899999999999999999999999
Q ss_pred HHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccc
Q 003824 315 KLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSS 394 (793)
Q Consensus 315 ~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (793)
+|+++||+++|+|||+..||.+||+++||..+.
T Consensus 526 ~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~----------------------------------------------- 558 (867)
T TIGR01524 526 ALFKNGINVKVLTGDNEIVTARICQEVGIDAND----------------------------------------------- 558 (867)
T ss_pred HHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-----------------------------------------------
Confidence 999999999999999999999999999995321
Q ss_pred cCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcc
Q 003824 395 NESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD 474 (793)
Q Consensus 395 ~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~Ad 474 (793)
+++|..++...++++.+.. . +..||+|++|+||.++|+.+|+ .|++|+|+|||.||+|||++||
T Consensus 559 ---------v~~g~~l~~~~~~el~~~~----~--~~~vfAr~~Pe~K~~iV~~lq~-~G~vVam~GDGvNDapALk~Ad 622 (867)
T TIGR01524 559 ---------FLLGADIEELSDEELAREL----R--KYHIFARLTPMQKSRIIGLLKK-AGHTVGFLGDGINDAPALRKAD 622 (867)
T ss_pred ---------eeecHhhhhCCHHHHHHHh----h--hCeEEEECCHHHHHHHHHHHHh-CCCEEEEECCCcccHHHHHhCC
Confidence 4555555544333333322 2 3349999999999999999998 8999999999999999999999
Q ss_pred eeEEeccCCcccccccCCeeecchh--hHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhH
Q 003824 475 IGVGISGVEGMQAVMSSDIAIAQFR--FLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDW 552 (793)
Q Consensus 475 vGI~i~g~~~~~a~~~aD~~i~~f~--~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~ 552 (793)
|||+|++ ....|+++||+++.+.+ .+..+ +.+||.+|+|+++++.|.+..|+..++..++..++. +..++.+.
T Consensus 623 VGIAmg~-gtdvAk~aADiVLldd~~~~I~~a-i~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~ 697 (867)
T TIGR01524 623 VGISVDT-AADIAKEASDIILLEKSLMVLEEG-VIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFI---PFLPMLSL 697 (867)
T ss_pred EEEEeCC-ccHHHHHhCCEEEecCChHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---hhhhHHHH
Confidence 9999963 22338999999999844 58888 899999999999999999999999888777766553 22469999
Q ss_pred HHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCC
Q 003824 553 FLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKG 632 (793)
Q Consensus 553 ~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 632 (793)
|++|.|++++ +|+++++.++ ++...|+.|+- ++.+ .....++..|++.+++.+..++..+.... ..
T Consensus 698 qil~inl~~d-~~~~al~~~~---~~~~~m~~p~~----~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~ 763 (867)
T TIGR01524 698 HLLIQNLLYD-FSQLTLPWDK---MDREFLKKPHQ----WEQK----GMGRFMLCIGPVSSIFDIATFLLMWFVFS--AN 763 (867)
T ss_pred HHHHHHHHHH-HHHHhhcCCC---CChHhhCCCCC----CChh----hHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cc
Confidence 9999999999 7999998753 44445566762 2222 22223444555554443333222111100 01
Q ss_pred CceeehhhHHHHHHHHHHHHHHHHHHHHhcch--hhHHHHHHHHHHHHHHHHHHHHhccCcc-ccchhHHHHHHHhcc--
Q 003824 633 GEVIGLEILGTTMYTCVVWVVNCQMALSVTYF--TYIQHLFIWGGITFWYIFLLAYGAMDPY-ISTTAYKVFIEACAP-- 707 (793)
Q Consensus 633 g~~~~~~~~~t~~f~~~v~~~~~~~~l~~~~~--~~~~~~~i~~si~~~~i~~~i~~~i~~~-~~~~~~~~~~~~~~~-- 707 (793)
+. .....+.+..|+.+++.+.+.++ ..++. .++.|...+..+++.++++++..++|+. ++. +|+..++
T Consensus 764 ~~-~~~~~~~t~~f~~~~~~~~~~~~-~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~-----~f~~~~l~~ 836 (867)
T TIGR01524 764 TV-EEQALFQSGWFVVGLLSQTLVVH-MIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGH-----SIGLVSLPL 836 (867)
T ss_pred ch-hhhhHHHHHHHHHHHHHHHHHHH-hhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhh-----hhccccCCc
Confidence 11 01113456778888888777764 33332 4456788888888888888888888852 233 5666655
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHH
Q 003824 708 APSFWLITLLVLMSSLLPYFTYS 730 (793)
Q Consensus 708 s~~~wl~~l~~~~~~ll~~~i~k 730 (793)
++..|+.++.++++ +...+.|
T Consensus 837 ~~~~~~~~~~~~~~--~~~e~~k 857 (867)
T TIGR01524 837 SYFPWLIAILVGYM--ATMQLVK 857 (867)
T ss_pred cHHHHHHHHHHHHH--HHHHHHH
Confidence 44557666655554 3344444
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-69 Score=587.11 Aligned_cols=611 Identities=20% Similarity=0.237 Sum_probs=466.9
Q ss_pred cCCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcc
Q 003824 3 YEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDK 82 (793)
Q Consensus 3 ~~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (793)
++|.+++++||++.++|+||...+||||||||||+|+|+|.++|.++.....+..+... +.
T Consensus 345 krMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~------~~------------- 405 (1019)
T KOG0203|consen 345 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQS------GQ------------- 405 (1019)
T ss_pred HHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhh------cc-------------
Confidence 35678999999999999999999999999999999999999999987654433221100 00
Q ss_pred cccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCC--ceeeecCCccHHHHHHHHHHcCCEEEeec
Q 003824 83 ASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENG--KISYEAESPDEAAFVIAARELGFEFYERT 160 (793)
Q Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~--~~~y~~~sp~E~Alv~~a~~~g~~~~~r~ 160 (793)
. ....++....+.++..+||.+.....+..- .-.-..+++.|.||++++.-.-....
T Consensus 406 ------~------------~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~--- 464 (1019)
T KOG0203|consen 406 ------S------------FDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVM--- 464 (1019)
T ss_pred ------c------------ccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHH---
Confidence 0 011245577899999999999876433211 11223589999999999875432211
Q ss_pred CceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCC---CcEEEEEecCchHhHHHHhhc---------chh
Q 003824 161 QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE---GTLLLLSKGADSVMFERLAEN---------GRE 228 (793)
Q Consensus 161 ~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~---~~~~l~~KGa~~~i~~~~~~~---------~~~ 228 (793)
..+..++.+..+||+|++|+.-.+.+.++ .++.+.+|||||.++++|+.. ++.
T Consensus 465 ---------------~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~ 529 (1019)
T KOG0203|consen 465 ---------------ELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEK 529 (1019)
T ss_pred ---------------HHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHH
Confidence 13467888899999999999999998765 578999999999999999863 345
Q ss_pred hHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCC
Q 003824 229 FEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNG 308 (793)
Q Consensus 229 ~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~ 308 (793)
..+.+.+...++...|-||+.+|++.++++++.+.-+-.-+. -+.--.+|.|+|++++-||+|..
T Consensus 530 ~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~---------------~n~p~~nl~FlGl~s~idPPR~~ 594 (1019)
T KOG0203|consen 530 LKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDD---------------VNFPTDNLRFLGLISMIDPPRAA 594 (1019)
T ss_pred HHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCC---------------CCCcchhccccchhhccCCCccc
Confidence 677888889999999999999999999987654321110000 01123689999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhh
Q 003824 309 VPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGK 388 (793)
Q Consensus 309 v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (793)
+|+++..++.|||||+|+|||++.||.+||++.||+..+.... +.+..+.....
T Consensus 595 vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~--------------------------e~~a~r~~~~v 648 (1019)
T KOG0203|consen 595 VPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETV--------------------------EDIAKRLNIPV 648 (1019)
T ss_pred CchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhh--------------------------hhhHHhcCCcc
Confidence 9999999999999999999999999999999999987553211 00111111111
Q ss_pred hccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChh
Q 003824 389 ELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVG 468 (793)
Q Consensus 389 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ 468 (793)
.+. +.....+.++.|.++..+.+++ +.++.....-.||+|.||+||..||+..|+ .|.+|+.+|||.||+|
T Consensus 649 ~~v----n~~~a~a~VihG~eL~~~~~~q----ld~il~nh~eIVFARTSPqQKLiIVe~cQr-~GaiVaVTGDGVNDsP 719 (1019)
T KOG0203|consen 649 EQV----NSRDAKAAVIHGSELPDMSSEQ----LDELLQNHQEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSP 719 (1019)
T ss_pred ccc----CccccceEEEecccccccCHHH----HHHHHHhCCceEEEecCccceEEeEhhhhh-cCcEEEEeCCCcCCCh
Confidence 111 1233578899999988666544 445555667789999999999999999998 9999999999999999
Q ss_pred hhhhcceeEEe--ccCCcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhccc
Q 003824 469 MLQEADIGVGI--SGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFS 544 (793)
Q Consensus 469 ml~~AdvGI~i--~g~~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s 544 (793)
|||.||||||| +|++. +|+|||.++.|++| ++.- +.+||.+|+|++|.|.|++..|+..+.+.++|.++
T Consensus 720 ALKKADIGVAMGiaGSDv--sKqAADmILLDDNFASIVtG-VEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~---- 792 (1019)
T KOG0203|consen 720 ALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILF---- 792 (1019)
T ss_pred hhcccccceeeccccchH--HHhhcceEEecCcchhheee-cccceehhhhHHHHHHHHHHhcchhHhHHHHHHHh----
Confidence 99999999976 66666 89999999999777 6655 78999999999999999999999999999988877
Q ss_pred Cccc-chhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHH-HHHHHHHHHHHHHHHHHHHH
Q 003824 545 GQPV-YNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRI-LGWALNGVANAAIIFFFCIH 622 (793)
Q Consensus 545 ~~~~-~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~-~~~~~~~~~~~~~~f~~~~~ 622 (793)
|.|+ +..++++.+.+..+..|++.++++. +..+.|++.|+ ....+++.|.+.+ +.++..|.+|++..|+.++.
T Consensus 793 giPLplgtitIL~IDLgTDmvPAiSLAYE~--aEsDIM~r~PR---~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFv 867 (1019)
T KOG0203|consen 793 GIPLPLGTVTILCIDLGTDIVPAISLAYEK--AESDIMLRPPR---NPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFV 867 (1019)
T ss_pred CCCcccchhhhhhhHhhcccchhhhHhccC--chhhHHhcCCC---CCcccccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555 7889999999999999999999874 44555566666 2356788888874 67889999999999999988
Q ss_pred Hhcccccc---------------------CCCceeeh-------hhHHHHHHHHHHHHHHHHHHHH-hcchh----hHHH
Q 003824 623 AMKQQAFR---------------------KGGEVIGL-------EILGTTMYTCVVWVVNCQMALS-VTYFT----YIQH 669 (793)
Q Consensus 623 ~~~~~~~~---------------------~~g~~~~~-------~~~~t~~f~~~v~~~~~~~~l~-~~~~~----~~~~ 669 (793)
.+...++. +.|+.... +...+.-|.+++.++...+++. ++.-+ -+.|
T Consensus 868 ima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN 947 (1019)
T KOG0203|consen 868 IMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRN 947 (1019)
T ss_pred HHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhh
Confidence 87765551 11322221 1233444555666665555432 33333 3466
Q ss_pred HHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003824 670 LFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRF 736 (793)
Q Consensus 670 ~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~ 736 (793)
..+++++++-.++..++.|.|+ ... .++..++.+.+|+..+..+++.++.+++.|++.|.|
T Consensus 948 ~vl~f~v~~e~~La~fl~y~pg-~~~-----~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~ 1008 (1019)
T KOG0203|consen 948 KVLIFAVIFETCLACFLCYCPG-VLY-----ALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRY 1008 (1019)
T ss_pred hhHHHHHHHHHHHHHHHhcCcc-HHH-----HhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhC
Confidence 7788888888888888888886 233 666778889999999999999999999999988865
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-62 Score=546.00 Aligned_cols=540 Identities=20% Similarity=0.272 Sum_probs=378.1
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
+-+++++.|-++.-+-.-|+++++||||||||||+.+.+-.+.+-...-.. ..+. ....+.+
T Consensus 448 RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~-~~~~--~~~~~~~--------------- 509 (1140)
T KOG0208|consen 448 RLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDD-GPEL--KVVTEDS--------------- 509 (1140)
T ss_pred HHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccc-cchh--hhhhhhh---------------
Confidence 346789999999999999999999999999999999999888753211000 0000 0000000
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeec---
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERT--- 160 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~--- 160 (793)
. +++..... +........+..++|.||+.....+. ..|+|.|.-+.+. .|+.+.+..
T Consensus 510 ---~------~~~~~l~~-~~~~~~~~~~~~a~atCHSL~~v~g~-------l~GDPLdlkmfe~---t~w~~ee~~~~~ 569 (1140)
T KOG0208|consen 510 ---L------QLFYKLSL-RSSSLPMGNLVAAMATCHSLTLVDGT-------LVGDPLDLKMFES---TGWVYEEADIED 569 (1140)
T ss_pred ---c------cceeeccc-cccCCchHHHHHHHhhhceeEEeCCe-------eccCceeeeeeec---cceEEEeccccc
Confidence 0 00000000 01111245788999999988765332 1357777666554 566664421
Q ss_pred ------C--ceeEEEecC---CCCCccceeEeEEeEeeCCCCCCceEEEEEEcC-CCcEEEEEecCchHhHHHHhhcchh
Q 003824 161 ------Q--TSISVHELD---PVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE-EGTLLLLSKGADSVMFERLAENGRE 228 (793)
Q Consensus 161 ------~--~~~~i~~~~---~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~ 228 (793)
. ....++... +......+..+.+++.+||+|.-+||||||+++ +.+..+|+|||||.|.+.|++. .
T Consensus 570 ~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~--t 647 (1140)
T KOG0208|consen 570 EATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE--T 647 (1140)
T ss_pred hhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc--c
Confidence 0 011122211 111111123799999999999999999999997 4678999999999999999876 5
Q ss_pred hHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCC
Q 003824 229 FEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNG 308 (793)
Q Consensus 229 ~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~ 308 (793)
.++++.+.++.|+.+|+|++++|+|.++.. .|.+. ....++.+|.||+|+|++.+|++||++
T Consensus 648 vP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~~---------------~~~~Rd~vEs~l~FlGLiVmeNkLK~~ 709 (1140)
T KOG0208|consen 648 VPADYQEVLKEYTHQGFRVIALASKELETS---TLQKA---------------QKLSRDTVESNLEFLGLIVMENKLKEE 709 (1140)
T ss_pred CCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHHH---------------hhccHhhhhccceeeEEEEeecccccc
Confidence 788999999999999999999999999875 23221 122347899999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccc-----hhhhHHHHHHHHHHHHHHH
Q 003824 309 VPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLE-----KSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 309 v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+|+.|++|+|+++|+||||..||+.+|++||++.+....+.......+..... ..+........ ++
T Consensus 710 T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~------~~ 783 (1140)
T KOG0208|consen 710 TKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDP------KE 783 (1140)
T ss_pred cHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCC------Cc
Confidence 99999999999999999999999999999999999999888777665533222110 00000000000 00
Q ss_pred Hhhhhhccc--cccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEc
Q 003824 384 LIRGKELLD--SSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 461 (793)
Q Consensus 384 ~~~~~~~~~--~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 461 (793)
........+ ...-....+.+.++|+.++.++ .+..+.+.+++..+. |||||+|.||+++|+.+|+ .|+.|+|||
T Consensus 784 ~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~~~l~~~Il~~~~--VfARMsP~qK~~Lie~lQk-l~y~VgfCG 859 (1140)
T KOG0208|consen 784 PDPDLASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHFPELVPKILLKGT--VFARMSPDQKAELIEALQK-LGYKVGFCG 859 (1140)
T ss_pred cCccccCCccChhhhccceeEEEecCchhHHHH-hhcHHHHHHHHhcCe--EEeecCchhHHHHHHHHHh-cCcEEEecC
Confidence 000000000 0011245689999999999888 466677788887777 9999999999999999999 899999999
Q ss_pred CCccChhhhhhcceeEEeccCCcccccccCCeeec--chhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHH
Q 003824 462 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA--QFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEA 539 (793)
Q Consensus 462 DG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~--~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~ 539 (793)
||+|||+|||+|||||+++.+| |.-||.|+.. +.+....+ +.+||..+.--....+|+..++ +++|...+
T Consensus 860 DGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~v-IrEGRaALVTSf~~FkYMalYs----~iqFisv~ 931 (1140)
T KOG0208|consen 860 DGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDV-IREGRAALVTSFACFKYMALYS----AIQFISVV 931 (1140)
T ss_pred CCcchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhHhHH-HhhhhhhhhhhHHHHHHHHHHH----HHHHHhhh
Confidence 9999999999999999998887 7889999988 45556666 9999998877666666664333 33444333
Q ss_pred HhcccCcccchhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHH
Q 003824 540 YASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFF 619 (793)
Q Consensus 540 ~~~~s~~~~~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 619 (793)
+..+ -...+.+.|.+..+++....-+++++.++ +..+..... |...+++++.+...+++.++..++-+.+
T Consensus 932 ~LY~-~~~nl~D~Qfl~iDLlii~pia~~m~~~~--a~~~L~~~r-------P~~~L~s~~~~~~l~~q~vli~l~q~i~ 1001 (1140)
T KOG0208|consen 932 FLYL-INSNLGDLQFLFIDLLIITPIAVMMSRFD--ASDKLFPKR-------PPTNLLSKKILVPLLLQIVLICLVQWIL 1001 (1140)
T ss_pred eeee-ecccccchhhhhhHHHHHHHHHHHHccCc--HHHHhcCCC-------CCccccccchhhhhHHHHHHHHHHHHhh
Confidence 3322 23458999999999998755556666543 333333333 3477888888888888888887777777
Q ss_pred HHHHhccccc
Q 003824 620 CIHAMKQQAF 629 (793)
Q Consensus 620 ~~~~~~~~~~ 629 (793)
++..-..+++
T Consensus 1002 ~l~~~~qpw~ 1011 (1140)
T KOG0208|consen 1002 TLIVEPQPWY 1011 (1140)
T ss_pred heeeccccce
Confidence 7665554444
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-61 Score=567.91 Aligned_cols=452 Identities=20% Similarity=0.269 Sum_probs=345.5
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.++++++|+++++|+||.+++||+|||||||+|+|++.+++..+..+.
T Consensus 266 r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~------------------------------ 315 (755)
T TIGR01647 266 ELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFD------------------------------ 315 (755)
T ss_pred HHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCC------------------------------
Confidence 35688999999999999999999999999999999999999875431100
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
.++++...++|+.. .++||.|.|+++++++.+.
T Consensus 316 -------------------------~~~~l~~a~~~~~~-------------~~~~pi~~Ai~~~~~~~~~--------- 348 (755)
T TIGR01647 316 -------------------------KDDVLLYAALASRE-------------EDQDAIDTAVLGSAKDLKE--------- 348 (755)
T ss_pred -------------------------HHHHHHHHHHhCCC-------------CCCChHHHHHHHHHHHhHH---------
Confidence 12345556666520 1369999999998876430
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCC-CcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHh
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE-GTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYAD 242 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 242 (793)
....|++++.+||+|.+|+|++++++++ |+.++++||||+.|+++|+.. .+.++++.+.+++++.
T Consensus 349 -------------~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-~~~~~~~~~~~~~~~~ 414 (755)
T TIGR01647 349 -------------ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-KEIEEKVEEKVDELAS 414 (755)
T ss_pred -------------HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-HHHHHHHHHHHHHHHh
Confidence 0145677889999999999999998764 778899999999999999754 2456678888999999
Q ss_pred ccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCe
Q 003824 243 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIK 322 (793)
Q Consensus 243 ~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIk 322 (793)
+|+|++++|+|+. |++|+|+|+++++||+|++++++|+.|+++||+
T Consensus 415 ~G~rvl~vA~~~~----------------------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~ 460 (755)
T TIGR01647 415 RGYRALGVARTDE----------------------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVE 460 (755)
T ss_pred CCCEEEEEEEEcC----------------------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCe
Confidence 9999999999721 378999999999999999999999999999999
Q ss_pred EEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeE
Q 003824 323 LWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLA 402 (793)
Q Consensus 323 v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (793)
++|+|||++.||.+||+++||..+. +.++.
T Consensus 461 v~miTGD~~~tA~~IA~~lGI~~~~-----~~~~~--------------------------------------------- 490 (755)
T TIGR01647 461 VKMVTGDHLAIAKETARRLGLGTNI-----YTADV--------------------------------------------- 490 (755)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCC-----cCHHH---------------------------------------------
Confidence 9999999999999999999996421 00000
Q ss_pred EEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccC
Q 003824 403 LIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGV 482 (793)
Q Consensus 403 lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~ 482 (793)
+.+|+.++.+.++++.+ +...+ .+|+|++|+||.++|+.+|+ .|++|+|+|||.||+|+|++|||||+|++
T Consensus 491 -l~~~~~~~~~~~~~~~~----~~~~~--~vfAr~~Pe~K~~iV~~lq~-~G~~VamvGDGvNDapAL~~AdVGIAm~~- 561 (755)
T TIGR01647 491 -LLKGDNRDDLPSGELGE----MVEDA--DGFAEVFPEHKYEIVEILQK-RGHLVGMTGDGVNDAPALKKADVGIAVAG- 561 (755)
T ss_pred -hcCCcchhhCCHHHHHH----HHHhC--CEEEecCHHHHHHHHHHHHh-cCCEEEEEcCCcccHHHHHhCCeeEEecC-
Confidence 11122221122222222 22233 39999999999999999998 89999999999999999999999999953
Q ss_pred CcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHHHHHHh
Q 003824 483 EGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVF 560 (793)
Q Consensus 483 ~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~ 560 (793)
....|+++||+++.+.++ +..+ +.+||..|.|+++++.|.+..|+..++..++..++.++ + ++++|++|.|++
T Consensus 562 gtdvAkeaADivLl~d~l~~I~~a-i~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~---~-l~~~~il~~~l~ 636 (755)
T TIGR01647 562 ATDAARSAADIVLTEPGLSVIVDA-ILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF---Y-FPPIMVVIIAIL 636 (755)
T ss_pred CcHHHHHhCCEEEEcCChHHHHHH-HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc---c-hhHHHHHHHHHH
Confidence 233389999999998554 8888 89999999999999999999999988776666554432 3 899999999999
Q ss_pred hccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCCceeehh
Q 003824 561 FTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAF-RKGGEVIGLE 639 (793)
Q Consensus 561 ~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~-~~~g~~~~~~ 639 (793)
.+. |.+++++++.+++ ++|+ ...++ ..+...+..|++.++..|.++++.+....+ ...+......
T Consensus 637 ~d~-~~~~l~~~~~~~~-----~~p~-------~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (755)
T TIGR01647 637 NDG-TIMTIAYDNVKPS-----KLPQ-------RWNLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHG 702 (755)
T ss_pred HhH-hHhhccCCCCCCC-----CCCC-------ccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHh
Confidence 995 7999987664322 3333 22233 555666788888888877777665531101 1111111233
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 003824 640 ILGTTMYTCVVWVVNCQMA 658 (793)
Q Consensus 640 ~~~t~~f~~~v~~~~~~~~ 658 (793)
.+.|++|+.+++.+.+.++
T Consensus 703 ~~~t~~f~~~~~~~~~~~~ 721 (755)
T TIGR01647 703 NLQSLIYLQVSISGQATIF 721 (755)
T ss_pred hhHHHHHHHHHHHHHHHHh
Confidence 5789999999998888875
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-51 Score=464.26 Aligned_cols=353 Identities=20% Similarity=0.248 Sum_probs=277.2
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.++++++|+++++|+||++++||+|||||||+|++.+.++...+.
T Consensus 278 r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~--------------------------------- 324 (673)
T PRK14010 278 RVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS--------------------------------- 324 (673)
T ss_pred HHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC---------------------------------
Confidence 56789999999999999999999999999999996665555321100
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
...++++.+.++|+.. +.||.+.|+++++++.|+....
T Consensus 325 -----------------------~~~~~ll~~a~~~~~~--------------s~~P~~~AIv~~a~~~~~~~~~----- 362 (673)
T PRK14010 325 -----------------------SSFERLVKAAYESSIA--------------DDTPEGRSIVKLAYKQHIDLPQ----- 362 (673)
T ss_pred -----------------------ccHHHHHHHHHHhcCC--------------CCChHHHHHHHHHHHcCCCchh-----
Confidence 0123456667777542 2499999999999987653210
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhc
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADA 243 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (793)
......||++++|+|++.++ ++ .+.|||++.++++|...+.....++.+..++++++
T Consensus 363 ------------------~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~ 419 (673)
T PRK14010 363 ------------------EVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKK 419 (673)
T ss_pred ------------------hhcceeccccccceeEEEEC---CE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhC
Confidence 00123799999999999754 33 45699999999999865433444566777889999
Q ss_pred cceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeE
Q 003824 244 GLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKL 323 (793)
Q Consensus 244 G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv 323 (793)
|+|+++++ .|++++|+++++|++|+|++++|++||++||++
T Consensus 420 G~~~l~v~---------------------------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~v 460 (673)
T PRK14010 420 GGTPLVVL---------------------------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIET 460 (673)
T ss_pred CCeEEEEE---------------------------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeE
Confidence 99999877 477899999999999999999999999999999
Q ss_pred EEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEE
Q 003824 324 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 403 (793)
Q Consensus 324 ~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 403 (793)
+|+|||+..||.+||+++|+..
T Consensus 461 vMiTGDn~~TA~aIA~elGI~~---------------------------------------------------------- 482 (673)
T PRK14010 461 VMCTGDNELTAATIAKEAGVDR---------------------------------------------------------- 482 (673)
T ss_pred EEECCCCHHHHHHHHHHcCCce----------------------------------------------------------
Confidence 9999999999999999999831
Q ss_pred EEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCC
Q 003824 404 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 483 (793)
Q Consensus 404 vi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~ 483 (793)
+++|++|+||.++|+.+|+ .|++|+|+|||.||+|+|++|||||+|+ +.
T Consensus 483 -----------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDGvNDAPALa~ADVGIAMg-sG 531 (673)
T PRK14010 483 -----------------------------FVAECKPEDKINVIREEQA-KGHIVAMTGDGTNDAPALAEANVGLAMN-SG 531 (673)
T ss_pred -----------------------------EEcCCCHHHHHHHHHHHHh-CCCEEEEECCChhhHHHHHhCCEEEEeC-CC
Confidence 8999999999999999998 8999999999999999999999999995 22
Q ss_pred cccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhH---------
Q 003824 484 GMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDW--------- 552 (793)
Q Consensus 484 ~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~--------- 552 (793)
...|+++||+++.+.++ +..+ +.+||..|.|+++++.|++..|+..++..+...|...+.+...+|-+
T Consensus 532 TdvAkeAADiVLldd~ls~Iv~a-v~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~ 610 (673)
T PRK14010 532 TMSAKEAANLIDLDSNPTKLMEV-VLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAMNHLNIMHLHSPESAV 610 (673)
T ss_pred CHHHHHhCCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHHHhcccchhhccccCCChHHHH
Confidence 33399999999998554 8888 89999999999999999999999988887776665444333323221
Q ss_pred -HHHHHHHhh--ccccceeeecccCCCChHHhhh
Q 003824 553 -FLSLYNVFF--TSLPVIALGVFDQDVSARFCLK 583 (793)
Q Consensus 553 -~~l~~n~~~--~~lp~l~l~~~~~~~~~~~~~~ 583 (793)
.-+.||-+. ..+|.-.-|+-.++.+...+++
T Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (673)
T PRK14010 611 LSALIFNALIIVLLIPIAMKGVKFKGASTQTILM 644 (673)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHh
Confidence 124456543 2345555566666666655443
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-49 Score=450.82 Aligned_cols=356 Identities=21% Similarity=0.264 Sum_probs=274.1
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.++++++|++.++|+||++|+||+|||||||+|+|.+.+++..+..
T Consensus 278 r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~-------------------------------- 325 (679)
T PRK01122 278 RVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV-------------------------------- 325 (679)
T ss_pred HHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC--------------------------------
Confidence 467899999999999999999999999999999999999887532100
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHH-cCCEEEeecCc
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARE-LGFEFYERTQT 162 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~-~g~~~~~r~~~ 162 (793)
..++++.+.++|+.. ..||...|++++|++ .|+....
T Consensus 326 ------------------------~~~~ll~~a~~~s~~--------------s~hP~~~AIv~~a~~~~~~~~~~---- 363 (679)
T PRK01122 326 ------------------------TEEELADAAQLSSLA--------------DETPEGRSIVVLAKQRFNLRERD---- 363 (679)
T ss_pred ------------------------CHHHHHHHHHHhcCC--------------CCCchHHHHHHHHHhhcCCCchh----
Confidence 012456667777543 248999999999986 3432110
Q ss_pred eeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHh
Q 003824 163 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYAD 242 (793)
Q Consensus 163 ~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 242 (793)
..++.....||++.+|+|++.+. | ..|+|||++.+++.|...+.+.++++.+.++++++
T Consensus 364 ----------------~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~ 422 (679)
T PRK01122 364 ----------------LQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVAR 422 (679)
T ss_pred ----------------hccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHh
Confidence 12445667899999998888653 3 57999999999999976554556778888899999
Q ss_pred ccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCe
Q 003824 243 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIK 322 (793)
Q Consensus 243 ~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIk 322 (793)
+|+|++++| .|++++|+++++|++|+|++++|++||++||+
T Consensus 423 ~G~~~l~va---------------------------------------~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~ 463 (679)
T PRK01122 423 KGGTPLVVA---------------------------------------EDNRVLGVIYLKDIVKPGIKERFAELRKMGIK 463 (679)
T ss_pred CCCcEEEEE---------------------------------------ECCeEEEEEEEeccCchhHHHHHHHHHHCCCe
Confidence 999999999 36789999999999999999999999999999
Q ss_pred EEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeE
Q 003824 323 LWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLA 402 (793)
Q Consensus 323 v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (793)
++|+|||++.||.+||+++|+..
T Consensus 464 vvMiTGDn~~TA~aIA~elGId~--------------------------------------------------------- 486 (679)
T PRK01122 464 TVMITGDNPLTAAAIAAEAGVDD--------------------------------------------------------- 486 (679)
T ss_pred EEEECCCCHHHHHHHHHHcCCcE---------------------------------------------------------
Confidence 99999999999999999999821
Q ss_pred EEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccC
Q 003824 403 LIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGV 482 (793)
Q Consensus 403 lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~ 482 (793)
+++|++|+||.++|+.+|+ .|+.|+|+|||.||+|||++|||||+|+ +
T Consensus 487 ------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDGvNDAPALa~ADVGIAMg-s 534 (679)
T PRK01122 487 ------------------------------FLAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQADVGVAMN-S 534 (679)
T ss_pred ------------------------------EEccCCHHHHHHHHHHHHH-cCCeEEEECCCcchHHHHHhCCEeEEeC-C
Confidence 8999999999999999998 8999999999999999999999999995 2
Q ss_pred CcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhH--------
Q 003824 483 EGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDW-------- 552 (793)
Q Consensus 483 ~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~-------- 552 (793)
....|+++||+++.+.++ +..+ +.+||...-.-..+..|++.-.++-.|..+-..|...+.+...+|-+
T Consensus 535 GTdvAkeAADiVLldd~~s~Iv~a-v~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~~~~~~~~~~~~~l~~~~~~ 613 (679)
T PRK01122 535 GTQAAKEAGNMVDLDSNPTKLIEV-VEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAATYPQLNALNIMHLHSPQSA 613 (679)
T ss_pred CCHHHHHhCCEEEeCCCHHHHHHH-HHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHhhCccccccccccCCChHHH
Confidence 223399999999998554 7777 89999999766667778877555444433333333222222222221
Q ss_pred --HHHHHHHhh--ccccceeeecccCCCChHHhhh
Q 003824 553 --FLSLYNVFF--TSLPVIALGVFDQDVSARFCLK 583 (793)
Q Consensus 553 --~~l~~n~~~--~~lp~l~l~~~~~~~~~~~~~~ 583 (793)
.-+.||-+. ..+|.-.-|+-.++.+...+++
T Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (679)
T PRK01122 614 ILSALIFNALIIVALIPLALKGVKYRPLSAAALLR 648 (679)
T ss_pred HHHHHHHHHHHHHHhHHHHhcCccccccCHHHHHh
Confidence 124566544 2355555666666666655443
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-48 Score=419.65 Aligned_cols=594 Identities=20% Similarity=0.238 Sum_probs=366.7
Q ss_pred CceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccccCCC
Q 003824 9 PARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGF 88 (793)
Q Consensus 9 ~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (793)
++.|..+=-+==.|+||+.|||||||||+..|.|..+.-... .....
T Consensus 464 ~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~--~~~~~------------------------------- 510 (1160)
T KOG0209|consen 464 GVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSA--DEGAL------------------------------- 510 (1160)
T ss_pred ceeecCccccccCCceeEEEecCCCccccccEEEEecccccC--Ccccc-------------------------------
Confidence 444444444455799999999999999999999987632111 00000
Q ss_pred CcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeEEEe
Q 003824 89 NFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHE 168 (793)
Q Consensus 89 ~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~ 168 (793)
.+-.+.-.+-.+++|.||+...-.++ .-|+|.|+|.+++ .|+.+...+.. .-+
T Consensus 511 --------------~~~s~~p~~t~~vlAscHsLv~le~~-------lVGDPlEKA~l~~---v~W~~~k~~~v--~p~- 563 (1160)
T KOG0209|consen 511 --------------TPASKAPNETVLVLASCHSLVLLEDK-------LVGDPLEKATLEA---VGWNLEKKNSV--CPR- 563 (1160)
T ss_pred --------------cchhhCCchHHHHHHHHHHHHHhcCc-------ccCChHHHHHHHh---cCcccccCccc--CCC-
Confidence 00011112456899999999875443 3579999999986 67766542211 000
Q ss_pred cCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCC----CcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhcc
Q 003824 169 LDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEE----GTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAG 244 (793)
Q Consensus 169 ~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~----~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 244 (793)
++.....+|.+.+.|+|.-|||||++.... -+++..+|||||+|.+++.. .+.++.+...+|+++|
T Consensus 564 ------~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d----vP~dY~~iYk~ytR~G 633 (1160)
T KOG0209|consen 564 ------EGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD----VPKDYDEIYKRYTRQG 633 (1160)
T ss_pred ------cCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh----CchhHHHHHHHHhhcc
Confidence 011135678899999999999999998742 36899999999999999874 5677888899999999
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEE
Q 003824 245 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 324 (793)
Q Consensus 245 ~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~ 324 (793)
.|||++|||.+.+--. .+.-+..++.+|+||+|.|++.+.-|+|++++++|+.|++++++++
T Consensus 634 sRVLALg~K~l~~~~~------------------~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vv 695 (1160)
T KOG0209|consen 634 SRVLALGYKPLGDMMV------------------SQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVV 695 (1160)
T ss_pred ceEEEEecccccccch------------------hhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEE
Confidence 9999999999874211 1111223578999999999999999999999999999999999999
Q ss_pred EEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhc--cccccC---CCC
Q 003824 325 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL--LDSSNE---SLG 399 (793)
Q Consensus 325 mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~ 399 (793)
|+|||++.||.++|+++|+..+...++.+.++.... +..-.+ ..+... ++.... --.
T Consensus 696 MITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~-~~~w~s-----------------~d~t~~lp~~p~~~~~~l~~ 757 (1160)
T KOG0209|consen 696 MITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGN-QLEWVS-----------------VDGTIVLPLKPGKKKTLLAE 757 (1160)
T ss_pred EEeCCCccchheehheeeeeccCceeeccCccCCCc-eeeEec-----------------CCCceeecCCCCccchhhhh
Confidence 999999999999999999988765555544432111 000000 000000 000000 112
Q ss_pred CeEEEEeCchhhHhhhhh-HHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEE
Q 003824 400 PLALIIDGKSLTYALEDD-VKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVG 478 (793)
Q Consensus 400 ~~~lvi~G~~l~~~~~~~-~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~ 478 (793)
.+.+.++|..++.+...+ +...+. ++-||+|++|+||..++..+|+ .|+.|+|||||.||++|||+|||||+
T Consensus 758 ~~dlcitG~~l~~l~~~~~l~~l~~------hv~VfARvaP~QKE~ii~tlK~-~Gy~TLMCGDGTNDVGALK~AhVGVA 830 (1160)
T KOG0209|consen 758 THDLCITGSALDHLQATDQLRRLIP------HVWVFARVAPKQKEFIITTLKK-LGYVTLMCGDGTNDVGALKQAHVGVA 830 (1160)
T ss_pred hhhhhcchhHHHHHhhhHHHHHhhh------heeEEEeeChhhHHHHHHHHHh-cCeEEEEecCCCcchhhhhhccccee
Confidence 456899999999887755 333333 3449999999999999999998 99999999999999999999999998
Q ss_pred eccCCc-c---------------------------------------------------------------------ccc
Q 003824 479 ISGVEG-M---------------------------------------------------------------------QAV 488 (793)
Q Consensus 479 i~g~~~-~---------------------------------------------------------------------~a~ 488 (793)
+-++.. . .|.
T Consensus 831 LL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDAS 910 (1160)
T KOG0209|consen 831 LLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDAS 910 (1160)
T ss_pred hhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccc
Confidence 743211 0 023
Q ss_pred ccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHh-cccCcccchhHHHHHHHHhhcccc
Q 003824 489 MSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYA-SFSGQPVYNDWFLSLYNVFFTSLP 565 (793)
Q Consensus 489 ~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~-~~s~~~~~~~~~~l~~n~~~~~lp 565 (793)
.||.|...- ...+.+. +..||+.....-+ .+|-+++-.+.-.|+... ...|. =|.+.|.+.--++...
T Consensus 911 iAAPFTsK~asv~~v~~I-IrQGRctLVtTlQ-----MfKILALN~LisAYslSvlyldGV-KfgD~QaTisGlLla~-- 981 (1160)
T KOG0209|consen 911 IAAPFTSKLASVSSVTHI-IRQGRCTLVTTLQ-----MFKILALNCLISAYSLSVLYLDGV-KFGDTQATISGLLLAA-- 981 (1160)
T ss_pred cccccccccchHHHHHHH-HHhcchhHHHHHH-----HHHHHHHHHHHHHHHHHHhhhcCc-eecchhHhHHHHHHHH--
Confidence 444444332 3335555 8999998876533 444444443333443221 11232 2677776665554422
Q ss_pred ceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccC---CCceeehhhHH
Q 003824 566 VIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRK---GGEVIGLEILG 642 (793)
Q Consensus 566 ~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~---~g~~~~~~~~~ 642 (793)
.++.+....+-+....+ .|...+||...+...+.+-..|-...+++.-.......-.. --...+.....
T Consensus 982 -cFlfISrskPLetLSke-------RP~~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllN 1053 (1160)
T KOG0209|consen 982 -CFLFISRSKPLETLSKE-------RPLPNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLN 1053 (1160)
T ss_pred -HHhheecCCchhhHhhc-------CCCCCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhh
Confidence 22223222222233333 34467899999988888887777766666544432211000 01112233444
Q ss_pred HHHHHHHHHHHHHHHHHHhcch----hhHHHHHHHHHHHHHHHHHH--HHhccCccccchhHHHHHHHhccChHHHHHHH
Q 003824 643 TTMYTCVVWVVNCQMALSVTYF----TYIQHLFIWGGITFWYIFLL--AYGAMDPYISTTAYKVFIEACAPAPSFWLITL 716 (793)
Q Consensus 643 t~~f~~~v~~~~~~~~l~~~~~----~~~~~~~i~~si~~~~i~~~--i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l 716 (793)
+.+|......+-...+.+..-. +...|..+..+++....+.+ +....|. +.. .|+.+...-.+-..++
T Consensus 1054 t~vyiisl~~QvsTFAVNY~G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~pe-Ln~-----~~~lV~mp~~fk~~ll 1127 (1160)
T KOG0209|consen 1054 TTVYIISLAQQVSTFAVNYQGRPFRESLRENKGLLYGLLGSAGVIIALATGSSPE-LNE-----KFELVDMPQDFKIKLL 1127 (1160)
T ss_pred hHHHHHHHHHHHHHhhhhccCcchhhhhhhccchHHHHHHHHHHHHHHHhccChh-HHh-----heeeecccHHHHHHHH
Confidence 5555543333222222222222 23455555555444333222 2223332 222 3433333334444455
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC
Q 003824 717 LVLMSSLLPYFTYSAIQMRFFP 738 (793)
Q Consensus 717 ~~~~~~ll~~~i~k~~~~~~~p 738 (793)
.+.++-++..+++.-+.+.+|+
T Consensus 1128 ~~l~lD~v~c~~~er~~~f~f~ 1149 (1160)
T KOG0209|consen 1128 AVLVLDFVLCYLVERVLKFFFG 1149 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc
Confidence 5555555555555555555555
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-47 Score=430.47 Aligned_cols=357 Identities=20% Similarity=0.264 Sum_probs=278.8
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.++++++|++.++|+||++|+||||||||||+|+|++.+++..+. .
T Consensus 279 r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-----~--------------------------- 326 (675)
T TIGR01497 279 RVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG-----V--------------------------- 326 (675)
T ss_pred HHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC-----C---------------------------
Confidence 45688999999999999999999999999999999999998763210 0
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
..++++.+.++|+.. +.||.+.|++++|++.|.....
T Consensus 327 ------------------------~~~~ll~~aa~~~~~--------------s~hP~a~Aiv~~a~~~~~~~~~----- 363 (675)
T TIGR01497 327 ------------------------DEKTLADAAQLASLA--------------DDTPEGKSIVILAKQLGIREDD----- 363 (675)
T ss_pred ------------------------cHHHHHHHHHHhcCC--------------CCCcHHHHHHHHHHHcCCCccc-----
Confidence 013456677777543 2589999999999987753221
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhc
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADA 243 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (793)
..++.....||++.+|+|++.+. +| ..++|||++.+++.|...+...++++.+.+++++++
T Consensus 364 ---------------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~ 424 (675)
T TIGR01497 364 ---------------VQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQ 424 (675)
T ss_pred ---------------cccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhC
Confidence 12234567899999888877554 34 579999999999988765444556778888999999
Q ss_pred cceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeE
Q 003824 244 GLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKL 323 (793)
Q Consensus 244 G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv 323 (793)
|+|++++|+ |.+++|+++++|++|||++++|++|+++||++
T Consensus 425 G~r~l~va~---------------------------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v 465 (675)
T TIGR01497 425 GGTPLVVCE---------------------------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKT 465 (675)
T ss_pred CCeEEEEEE---------------------------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEE
Confidence 999999993 45899999999999999999999999999999
Q ss_pred EEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEE
Q 003824 324 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 403 (793)
Q Consensus 324 ~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 403 (793)
+|+|||+..||..+|+++|+..
T Consensus 466 ~miTGD~~~ta~~iA~~lGI~~---------------------------------------------------------- 487 (675)
T TIGR01497 466 IMITGDNRLTAAAIAAEAGVDD---------------------------------------------------------- 487 (675)
T ss_pred EEEcCCCHHHHHHHHHHcCCCE----------------------------------------------------------
Confidence 9999999999999999999731
Q ss_pred EEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCC
Q 003824 404 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 483 (793)
Q Consensus 404 vi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~ 483 (793)
+++|++|++|..+|+.+|+ .|+.|+|+|||.||+|||++|||||+|++.
T Consensus 488 -----------------------------v~a~~~PedK~~~v~~lq~-~g~~VamvGDG~NDapAL~~AdvGiAm~~g- 536 (675)
T TIGR01497 488 -----------------------------FIAEATPEDKIALIRQEQA-EGKLVAMTGDGTNDAPALAQADVGVAMNSG- 536 (675)
T ss_pred -----------------------------EEcCCCHHHHHHHHHHHHH-cCCeEEEECCCcchHHHHHhCCEeEEeCCC-
Confidence 7899999999999999998 789999999999999999999999999532
Q ss_pred cccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchh----------
Q 003824 484 GMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYND---------- 551 (793)
Q Consensus 484 ~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~---------- 551 (793)
...|+++||+++.+.++ +..+ +.+||..+.....+..|++..+++-.|..+-..|...+.+...+|-
T Consensus 537 t~~akeaadivLldd~~s~Iv~a-v~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (675)
T TIGR01497 537 TQAAKEAANMVDLDSDPTKLIEV-VHIGKQLLITRGALTTFSIANDVAKYFAIIPAIFAAAYPQLQALNIMCLHSPDSAI 615 (675)
T ss_pred CHHHHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHheeeecccHHHHHHHHHHHHHhhCcchhhhccccCCChHHHH
Confidence 33389999999998554 7777 8999999999999999999888776665554444433322222221
Q ss_pred HHHHHHHHhh--ccccceeeecccCCCChHHhhh
Q 003824 552 WFLSLYNVFF--TSLPVIALGVFDQDVSARFCLK 583 (793)
Q Consensus 552 ~~~l~~n~~~--~~lp~l~l~~~~~~~~~~~~~~ 583 (793)
..-+.||-+. ..+|.-.-|+-.++.+...+++
T Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (675)
T TIGR01497 616 LSALIFNALIIPALIPLALKGVSYRPLTASALLR 649 (675)
T ss_pred HHHHHHHHHHHHHhHHHHhcCcccccCCHHHHHh
Confidence 1124456544 2345555566666666555443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=388.68 Aligned_cols=272 Identities=37% Similarity=0.512 Sum_probs=234.2
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
..++++++|+++++|+||++++||||||||||+|+|+|.++++.+.
T Consensus 211 ~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~---------------------------------- 256 (499)
T TIGR01494 211 LAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG---------------------------------- 256 (499)
T ss_pred HHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC----------------------------------
Confidence 3467999999999999999999999999999999999999865421
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCcee
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI 164 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~ 164 (793)
++.++||+|.|++++++..+
T Consensus 257 -------------------------------------------------~~~s~hp~~~ai~~~~~~~~----------- 276 (499)
T TIGR01494 257 -------------------------------------------------EYLSGHPDERALVKSAKWKI----------- 276 (499)
T ss_pred -------------------------------------------------CcCCCChHHHHHHHHhhhcC-----------
Confidence 01246999999999986411
Q ss_pred EEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhcc
Q 003824 165 SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAG 244 (793)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 244 (793)
+...||++.+|+|+++++.+++ .|+||+++.+.+.|.. +.+.+++++.+|
T Consensus 277 -------------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------~~~~~~~~~~~g 326 (499)
T TIGR01494 277 -------------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------LEEKVKELAQSG 326 (499)
T ss_pred -------------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------HHHHHHHHHhCC
Confidence 1356999999999999997444 4789999999988752 233455678899
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEE
Q 003824 245 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 324 (793)
Q Consensus 245 ~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~ 324 (793)
+|++++|++ -+++|+++++|++|++++++|+.|+++|+++|
T Consensus 327 ~~~~~~a~~---------------------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~ 367 (499)
T TIGR01494 327 LRVLAVASK---------------------------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVI 367 (499)
T ss_pred CEEEEEEEC---------------------------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEE
Confidence 999999953 26899999999999999999999999999999
Q ss_pred EEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEE
Q 003824 325 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALI 404 (793)
Q Consensus 325 mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 404 (793)
|+|||+..+|..+|+++|+
T Consensus 368 ~ltGD~~~~a~~ia~~lgi------------------------------------------------------------- 386 (499)
T TIGR01494 368 MLTGDNVLTAKAIAKELGI------------------------------------------------------------- 386 (499)
T ss_pred EEcCCCHHHHHHHHHHcCc-------------------------------------------------------------
Confidence 9999999999999998873
Q ss_pred EeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCc
Q 003824 405 IDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG 484 (793)
Q Consensus 405 i~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~ 484 (793)
+++++|++|..+|+.+|+ .|+.|+|+|||.||++|+++|||||+|.
T Consensus 387 -----------------------------~~~~~p~~K~~~v~~l~~-~g~~v~~vGDg~nD~~al~~Advgia~~---- 432 (499)
T TIGR01494 387 -----------------------------FARVTPEEKAALVEALQK-KGRVVAMTGDGVNDAPALKKADVGIAMG---- 432 (499)
T ss_pred -----------------------------eeccCHHHHHHHHHHHHH-CCCEEEEECCChhhHHHHHhCCCccccc----
Confidence 477899999999999998 7899999999999999999999999994
Q ss_pred ccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHH
Q 003824 485 MQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFF 537 (793)
Q Consensus 485 ~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 537 (793)
|+++||+++.+++. +..+ +.+||..+.++++.+.|.+++|+..+.+.+++
T Consensus 433 --a~~~adivl~~~~l~~i~~~-~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 433 --AKAAADIVLLDDNLSTIVDA-LKEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred --hHHhCCeEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999998544 5555 89999999999999999999999977766653
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=366.32 Aligned_cols=470 Identities=18% Similarity=0.231 Sum_probs=318.7
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEE----EEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhh
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIK----CSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQ 79 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (793)
.-+++++++++++++|+|+.+|++|||||||||.|++.+.+ +++.|..
T Consensus 307 rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~---------------------------- 358 (942)
T KOG0205|consen 307 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVD---------------------------- 358 (942)
T ss_pred HHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCC----------------------------
Confidence 44678999999999999999999999999999999999876 2222211
Q ss_pred hcccccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEee
Q 003824 80 EDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYER 159 (793)
Q Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r 159 (793)
-.++++..|+.. ..+ +.+..|.|+|...++-
T Consensus 359 -----------------------------~D~~~L~A~rAs--r~e-----------n~DAID~A~v~~L~dP------- 389 (942)
T KOG0205|consen 359 -----------------------------KDDVLLTAARAS--RKE-----------NQDAIDAAIVGMLADP------- 389 (942)
T ss_pred -----------------------------hHHHHHHHHHHh--hhc-----------ChhhHHHHHHHhhcCH-------
Confidence 012233333332 111 3578999999875431
Q ss_pred cCceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHH
Q 003824 160 TQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINE 239 (793)
Q Consensus 160 ~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~ 239 (793)
+.....|+.++.+|||+..||-...+.+++|.-+..+||||+-|++.|+... +.+++..+.+++
T Consensus 390 ---------------Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~-~i~~~vh~~id~ 453 (942)
T KOG0205|consen 390 ---------------KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDH-DIPERVHSIIDK 453 (942)
T ss_pred ---------------HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccC-cchHHHHHHHHH
Confidence 1123678999999999999999999999999999999999999999998754 688999999999
Q ss_pred HHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHc
Q 003824 240 YADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQA 319 (793)
Q Consensus 240 ~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~a 319 (793)
|+++|+|.|++|++..++..- +.-.....++|+.-+-||+|.+..++|.+...-
T Consensus 454 ~AeRGlRSLgVArq~v~e~~~--------------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~l 507 (942)
T KOG0205|consen 454 FAERGLRSLAVARQEVPEKTK--------------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNL 507 (942)
T ss_pred HHHhcchhhhhhhhccccccc--------------------------cCCCCCcccccccccCCCCccchHHHHHHHHhc
Confidence 999999999999998876421 111357899999999999999999999999999
Q ss_pred CCeEEEEeCCchhhHHHHHHHcCccccCce---EEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccC
Q 003824 320 GIKLWVLTGDKMETAINIGFACSLLRQGMR---QVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNE 396 (793)
Q Consensus 320 gIkv~mlTGD~~~ta~~ia~~~gi~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (793)
|+.|.|+|||...-+...++.+|+-++-.. .+..+.++
T Consensus 508 Gv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~--------------------------------------- 548 (942)
T KOG0205|consen 508 GVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDG--------------------------------------- 548 (942)
T ss_pred cceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCC---------------------------------------
Confidence 999999999999999999999998654211 00000000
Q ss_pred CCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhccee
Q 003824 397 SLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIG 476 (793)
Q Consensus 397 ~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvG 476 (793)
-+.|.......+ ++--|+.+.|+||..+|+.+|+ .++.+.|+|||+||+|+++.||+|
T Consensus 549 -------~~~~~~v~elie--------------~adgfAgVfpehKy~iV~~Lq~-r~hi~gmtgdgvndapaLKkAdig 606 (942)
T KOG0205|consen 549 -------SMPGSPVDELIE--------------KADGFAGVFPEHKYEIVKILQE-RKHIVGMTGDGVNDAPALKKADIG 606 (942)
T ss_pred -------CCCCCcHHHHhh--------------hccCccccCHHHHHHHHHHHhh-cCceecccCCCcccchhhcccccc
Confidence 011111111111 2237889999999999999999 899999999999999999999999
Q ss_pred EEeccCCcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHH
Q 003824 477 VGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFL 554 (793)
Q Consensus 477 I~i~g~~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~ 554 (793)
|++.+.... |..+||+++..-.. +... +..+|.+|+|++.+..|.+.-.+-.++-..+.....-| -|++...
T Consensus 607 iava~atda-ar~asdiVltepglSviI~a-vltSraIfqrmknytiyavsitiriv~gfml~alIw~~----df~pfmv 680 (942)
T KOG0205|consen 607 IAVADATDA-ARSASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEF----DFSPFMV 680 (942)
T ss_pred eeeccchhh-hcccccEEEcCCCchhhHHH-HHHHHHHHHHHhhheeeeehhHHHHHHHHHHHHHHHHh----cCCHHHH
Confidence 999766554 88899999998444 5555 67899999999999888877665443222221111111 1344444
Q ss_pred HHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhH-HHHHHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 003824 555 SLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWT-RILGWALNGVANAAIIFFFCIHAMKQQAFRKGG 633 (793)
Q Consensus 555 l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~-~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~g 633 (793)
+++-+ ++--+....+.... |+ ++...-++.+ .|..-++.|-|++++.-.+++..+....+....
T Consensus 681 liiai-lnd~t~mtis~d~v----------~p----sp~pdswkl~~ifatgvVlgtyma~~tvif~w~~~~t~ff~~~f 745 (942)
T KOG0205|consen 681 LIIAI-LNDGTIMTISKDRV----------KP----SPTPDSWKLKEIFATGVVLGTYMAIMTVIFFWAAYTTDFFPRTF 745 (942)
T ss_pred HHHHH-hcCCceEEEEcccC----------CC----CCCCcccchhhhheeeeEehhHHHHHHHHHhhhhcccccccccc
Confidence 43333 33355555543221 11 1111122222 233444566666666555544443332222111
Q ss_pred cee----ehhhHHHHHHHHHHHHHHHHHH-HHhcchhhHHHHHHHH
Q 003824 634 EVI----GLEILGTTMYTCVVWVVNCQMA-LSVTYFTYIQHLFIWG 674 (793)
Q Consensus 634 ~~~----~~~~~~t~~f~~~v~~~~~~~~-l~~~~~~~~~~~~i~~ 674 (793)
.+. ........+|..+.++.+..++ ..+++|.|...+.+++
T Consensus 746 ~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L 791 (942)
T KOG0205|consen 746 GVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLL 791 (942)
T ss_pred ceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHH
Confidence 111 1122334556666666555543 3455666554444433
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=353.88 Aligned_cols=293 Identities=25% Similarity=0.291 Sum_probs=229.6
Q ss_pred CCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccccc
Q 003824 6 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASI 85 (793)
Q Consensus 6 ~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (793)
.++|+++|+.+++|.|+++|+|+||||||||+|+|.+.++...+. ++
T Consensus 387 A~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~------~e--------------------------- 433 (713)
T COG2217 387 ARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG------DE--------------------------- 433 (713)
T ss_pred HhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC------CH---------------------------
Confidence 468999999999999999999999999999999999998865432 00
Q ss_pred CCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeE
Q 003824 86 KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSIS 165 (793)
Q Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~ 165 (793)
.+++...+. ++..++||...|++++|++.|.....
T Consensus 434 ------------------------~~~L~laAa--------------lE~~S~HPiA~AIv~~a~~~~~~~~~------- 468 (713)
T COG2217 434 ------------------------DELLALAAA--------------LEQHSEHPLAKAIVKAAAERGLPDVE------- 468 (713)
T ss_pred ------------------------HHHHHHHHH--------------HHhcCCChHHHHHHHHHHhcCCCCcc-------
Confidence 122222221 12346899999999999987721111
Q ss_pred EEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhccc
Q 003824 166 VHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGL 245 (793)
Q Consensus 166 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~ 245 (793)
.....+|.+++..+ +| ..+.-|.+..+.+.- .+... .....+.+..+|.
T Consensus 469 --~~~~i~G~Gv~~~v----------------------~g--~~v~vG~~~~~~~~~----~~~~~-~~~~~~~~~~~G~ 517 (713)
T COG2217 469 --DFEEIPGRGVEAEV----------------------DG--ERVLVGNARLLGEEG----IDLPL-LSERIEALESEGK 517 (713)
T ss_pred --ceeeeccCcEEEEE----------------------CC--EEEEEcCHHHHhhcC----CCccc-hhhhHHHHHhcCC
Confidence 01112233332221 34 234447776654321 11111 5567778889999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEEE
Q 003824 246 RTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWV 325 (793)
Q Consensus 246 r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~m 325 (793)
.++.++ .|-.++|+++++|++|++++++|+.||+.||++.|
T Consensus 518 t~v~va---------------------------------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~m 558 (713)
T COG2217 518 TVVFVA---------------------------------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVM 558 (713)
T ss_pred eEEEEE---------------------------------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEE
Confidence 988888 46689999999999999999999999999999999
Q ss_pred EeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEEE
Q 003824 326 LTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALII 405 (793)
Q Consensus 326 lTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 405 (793)
+|||+..+|..||+++||..
T Consensus 559 LTGDn~~~A~~iA~~lGId~------------------------------------------------------------ 578 (713)
T COG2217 559 LTGDNRRTAEAIAKELGIDE------------------------------------------------------------ 578 (713)
T ss_pred EcCCCHHHHHHHHHHcChHh------------------------------------------------------------
Confidence 99999999999999999831
Q ss_pred eCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEecc-CCc
Q 003824 406 DGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISG-VEG 484 (793)
Q Consensus 406 ~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g-~~~ 484 (793)
+.+.+.|++|.++|+.+|+ .|++|+|+|||.||+|+|.+|||||+|+. ++.
T Consensus 579 ---------------------------v~AellPedK~~~V~~l~~-~g~~VamVGDGINDAPALA~AdVGiAmG~GtDv 630 (713)
T COG2217 579 ---------------------------VRAELLPEDKAEIVRELQA-EGRKVAMVGDGINDAPALAAADVGIAMGSGTDV 630 (713)
T ss_pred ---------------------------heccCCcHHHHHHHHHHHh-cCCEEEEEeCCchhHHHHhhcCeeEeecCCcHH
Confidence 8899999999999999997 89999999999999999999999999954 444
Q ss_pred ccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHH
Q 003824 485 MQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFF 537 (793)
Q Consensus 485 ~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~ 537 (793)
|+++||+++.+.+. +..+ +.-+|..+.++++.+.+.|..|.+++.+..+.
T Consensus 631 --A~eaADvvL~~~dL~~v~~a-i~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 631 --AIEAADVVLMRDDLSAVPEA-IDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred --HHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998544 6666 88999999999999999999998877665543
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=343.89 Aligned_cols=288 Identities=24% Similarity=0.254 Sum_probs=223.6
Q ss_pred CCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccccc
Q 003824 6 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASI 85 (793)
Q Consensus 6 ~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (793)
.++++++|+.+++|.|+++++||||||||||+|+|++.++...+.. +
T Consensus 418 ar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-----~---------------------------- 464 (741)
T PRK11033 418 ARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI-----S---------------------------- 464 (741)
T ss_pred HHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC-----C----------------------------
Confidence 4789999999999999999999999999999999999987543210 0
Q ss_pred CCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeE
Q 003824 86 KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSIS 165 (793)
Q Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~ 165 (793)
.++++...+.. + ..+.||.+.|+++++++.|..
T Consensus 465 -----------------------~~~~l~~aa~~-----e---------~~s~hPia~Ai~~~a~~~~~~---------- 497 (741)
T PRK11033 465 -----------------------ESELLALAAAV-----E---------QGSTHPLAQAIVREAQVRGLA---------- 497 (741)
T ss_pred -----------------------HHHHHHHHHHH-----h---------cCCCCHHHHHHHHHHHhcCCC----------
Confidence 01222222211 1 124699999999999876532
Q ss_pred EEecCCCCCccceeEeEEeEeeCCCCCCceEEE-EEE-cCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhc
Q 003824 166 VHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV-IVR-SEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADA 243 (793)
Q Consensus 166 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsv-iv~-~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (793)
+||.++++.+.- -++ .-+|+.+ .-|+++.+.+ . .+...+.++++..+
T Consensus 498 ---------------------~~~~~~~~~~~g~Gv~~~~~g~~~--~ig~~~~~~~-~-------~~~~~~~~~~~~~~ 546 (741)
T PRK11033 498 ---------------------IPEAESQRALAGSGIEGQVNGERV--LICAPGKLPP-L-------ADAFAGQINELESA 546 (741)
T ss_pred ---------------------CCCCcceEEEeeEEEEEEECCEEE--EEecchhhhh-c-------cHHHHHHHHHHHhC
Confidence 345555555431 121 1134432 3488887654 1 12344566788999
Q ss_pred cceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeE
Q 003824 244 GLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKL 323 (793)
Q Consensus 244 G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv 323 (793)
|+|++++| .|.+++|+++++|++|+|++++|+.|++.|+++
T Consensus 547 g~~~v~va---------------------------------------~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~ 587 (741)
T PRK11033 547 GKTVVLVL---------------------------------------RNDDVLGLIALQDTLRADARQAISELKALGIKG 587 (741)
T ss_pred CCEEEEEE---------------------------------------ECCEEEEEEEEecCCchhHHHHHHHHHHCCCEE
Confidence 99999999 366899999999999999999999999999999
Q ss_pred EEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEE
Q 003824 324 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 403 (793)
Q Consensus 324 ~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 403 (793)
+|+|||+..+|..+|+++||.
T Consensus 588 ~llTGd~~~~a~~ia~~lgi~----------------------------------------------------------- 608 (741)
T PRK11033 588 VMLTGDNPRAAAAIAGELGID----------------------------------------------------------- 608 (741)
T ss_pred EEEcCCCHHHHHHHHHHcCCC-----------------------------------------------------------
Confidence 999999999999999999972
Q ss_pred EEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCC
Q 003824 404 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 483 (793)
Q Consensus 404 vi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~ 483 (793)
..++..|++|..+|+.+++ . ..|+|+|||.||++||++|||||+|++.
T Consensus 609 -----------------------------~~~~~~p~~K~~~v~~l~~-~-~~v~mvGDgiNDapAl~~A~vgia~g~~- 656 (741)
T PRK11033 609 -----------------------------FRAGLLPEDKVKAVTELNQ-H-APLAMVGDGINDAPAMKAASIGIAMGSG- 656 (741)
T ss_pred -----------------------------eecCCCHHHHHHHHHHHhc-C-CCEEEEECCHHhHHHHHhCCeeEEecCC-
Confidence 3355789999999999986 3 5899999999999999999999999633
Q ss_pred cccccccCCeeecchh--hHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHH
Q 003824 484 GMQAVMSSDIAIAQFR--FLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 535 (793)
Q Consensus 484 ~~~a~~~aD~~i~~f~--~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 535 (793)
...++++||+++.+.+ .+..+ +..||..+.++++.+.|.+..|++++.+.+
T Consensus 657 ~~~a~~~adivl~~~~l~~l~~~-i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 657 TDVALETADAALTHNRLRGLAQM-IELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred CHHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3348899999998744 46666 899999999999999999999987655443
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=320.16 Aligned_cols=301 Identities=22% Similarity=0.256 Sum_probs=228.6
Q ss_pred CCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccccc
Q 003824 6 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASI 85 (793)
Q Consensus 6 ~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (793)
..+|+++|..+.+|.+.+|++|.||||||||+|++.+.++.+-+...
T Consensus 564 A~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~--------------------------------- 610 (951)
T KOG0207|consen 564 ATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI--------------------------------- 610 (951)
T ss_pred hhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc---------------------------------
Confidence 36799999999999999999999999999999999999987654320
Q ss_pred CCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeE
Q 003824 86 KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSIS 165 (793)
Q Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~ 165 (793)
..++++...+.- +-.++||...|++++|++.+ ..++...
T Consensus 611 ----------------------~~~e~l~~v~a~--------------Es~SeHPig~AIv~yak~~~-----~~~~~~~ 649 (951)
T KOG0207|consen 611 ----------------------SLKEALALVAAM--------------ESGSEHPIGKAIVDYAKEKL-----VEPNPEG 649 (951)
T ss_pred ----------------------cHHHHHHHHHHH--------------hcCCcCchHHHHHHHHHhcc-----cccCccc
Confidence 112333222211 12357999999999999876 1111111
Q ss_pred EEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhccc
Q 003824 166 VHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGL 245 (793)
Q Consensus 166 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~ 245 (793)
+......+|.+ +...+.+. +.- .+-|.-+.| .+++....++..+.+++-...|.
T Consensus 650 ~~~~~~~pg~g-----------------~~~~~~~~---~~~--i~iGN~~~~----~r~~~~~~~~i~~~~~~~e~~g~ 703 (951)
T KOG0207|consen 650 VLSFEYFPGEG-----------------IYVTVTVD---GNE--VLIGNKEWM----SRNGCSIPDDILDALTESERKGQ 703 (951)
T ss_pred cceeecccCCC-----------------cccceEEe---eeE--EeechHHHH----HhcCCCCchhHHHhhhhHhhcCc
Confidence 22222222221 11111111 111 223554333 33333345567788888889999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEEE
Q 003824 246 RTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWV 325 (793)
Q Consensus 246 r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~m 325 (793)
.+.+++ -|-+++|+++++|++|+|+..+|+.||+.||++.|
T Consensus 704 tvv~v~---------------------------------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~m 744 (951)
T KOG0207|consen 704 TVVYVA---------------------------------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVM 744 (951)
T ss_pred eEEEEE---------------------------------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEE
Confidence 999998 57789999999999999999999999999999999
Q ss_pred EeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEEE
Q 003824 326 LTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALII 405 (793)
Q Consensus 326 lTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 405 (793)
+|||+..||.++|+++|+-
T Consensus 745 LTGDn~~aA~svA~~VGi~------------------------------------------------------------- 763 (951)
T KOG0207|consen 745 LTGDNDAAARSVAQQVGID------------------------------------------------------------- 763 (951)
T ss_pred EcCCCHHHHHHHHHhhCcc-------------------------------------------------------------
Confidence 9999999999999999942
Q ss_pred eCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCcc
Q 003824 406 DGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGM 485 (793)
Q Consensus 406 ~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~ 485 (793)
.|+|.+.|+||..+|+.+|+ .+..|+|+|||.||+|+|.+|||||+|+...+
T Consensus 764 --------------------------~V~aev~P~~K~~~Ik~lq~-~~~~VaMVGDGINDaPALA~AdVGIaig~gs~- 815 (951)
T KOG0207|consen 764 --------------------------NVYAEVLPEQKAEKIKEIQK-NGGPVAMVGDGINDAPALAQADVGIAIGAGSD- 815 (951)
T ss_pred --------------------------eEEeccCchhhHHHHHHHHh-cCCcEEEEeCCCCccHHHHhhccceeeccccH-
Confidence 19999999999999999998 78999999999999999999999999954432
Q ss_pred cccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHH
Q 003824 486 QAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 535 (793)
Q Consensus 486 ~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 535 (793)
.|.++||+++...+. +... +.-+|....|++..+.|.+.+|++-+.+..
T Consensus 816 vAieaADIVLmrn~L~~v~~a-i~LSrkt~~rIk~N~~~A~~yn~~~IpIAa 866 (951)
T KOG0207|consen 816 VAIEAADIVLMRNDLRDVPFA-IDLSRKTVKRIKLNFVWALIYNLVGIPIAA 866 (951)
T ss_pred HHHhhCCEEEEccchhhhHHH-HHHHHHHHhhHHHHHHHHHHHHHhhhhhhe
Confidence 399999999998644 4444 778999999999999999999987554433
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=324.13 Aligned_cols=299 Identities=23% Similarity=0.287 Sum_probs=225.5
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
..++++++|+++.+|.||++|+||||||||||+|+|++.++...+... .
T Consensus 227 ~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~---~---------------------------- 275 (556)
T TIGR01525 227 AARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS---I---------------------------- 275 (556)
T ss_pred HHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC---c----------------------------
Confidence 457899999999999999999999999999999999999886542110 0
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCcee
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI 164 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~ 164 (793)
...+++..++.+ . ..+.||.+.|+++++++.|..... +.
T Consensus 276 -----------------------~~~~~l~~a~~~---e-----------~~~~hp~~~Ai~~~~~~~~~~~~~--~~-- 314 (556)
T TIGR01525 276 -----------------------SEEELLALAAAL---E-----------QSSSHPLARAIVRYAKKRGLELPK--QE-- 314 (556)
T ss_pred -----------------------cHHHHHHHHHHH---h-----------ccCCChHHHHHHHHHHhcCCCccc--cc--
Confidence 001222222222 1 124699999999999987653211 00
Q ss_pred EEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhcc
Q 003824 165 SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAG 244 (793)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 244 (793)
++ ..+ ..+.+...+ +|. ..+..|+++.+ + . +.....+..+.++.++.+|
T Consensus 315 ---------------~~---~~~----~~~gi~~~~---~g~-~~~~lg~~~~~-~-~---~~~~~~~~~~~~~~~~~~g 363 (556)
T TIGR01525 315 ---------------DV---EEV----PGKGVEATV---DGQ-EEVRIGNPRLL-E-L---AAEPISASPDLLNEGESQG 363 (556)
T ss_pred ---------------Ce---eEe----cCCeEEEEE---CCe-eEEEEecHHHH-h-h---cCCCchhhHHHHHHHhhCC
Confidence 00 000 012222222 121 23344666654 1 1 1111223345677888999
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcC-CeE
Q 003824 245 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAG-IKL 323 (793)
Q Consensus 245 ~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~ag-Ikv 323 (793)
+|++.++ .|.+++|.+.++|+++||++++|+.|+++| +++
T Consensus 364 ~~~~~v~---------------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v 404 (556)
T TIGR01525 364 KTVVFVA---------------------------------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKL 404 (556)
T ss_pred cEEEEEE---------------------------------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeE
Confidence 9999998 466899999999999999999999999999 999
Q ss_pred EEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEE
Q 003824 324 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 403 (793)
Q Consensus 324 ~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 403 (793)
+|+|||+..++..+++++|+-.
T Consensus 405 ~ivTgd~~~~a~~i~~~lgi~~---------------------------------------------------------- 426 (556)
T TIGR01525 405 VMLTGDNRSAAEAVAAELGIDE---------------------------------------------------------- 426 (556)
T ss_pred EEEeCCCHHHHHHHHHHhCCCe----------------------------------------------------------
Confidence 9999999999999999999721
Q ss_pred EEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCC
Q 003824 404 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 483 (793)
Q Consensus 404 vi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~ 483 (793)
+|+++.|++|..+++.++. .++.|+|+|||.||++|+++||+||++++ .
T Consensus 427 -----------------------------~f~~~~p~~K~~~v~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~-~ 475 (556)
T TIGR01525 427 -----------------------------VHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPALAAADVGIAMGA-G 475 (556)
T ss_pred -----------------------------eeccCCHHHHHHHHHHHHH-cCCEEEEEECChhHHHHHhhCCEeEEeCC-C
Confidence 6778899999999999997 77899999999999999999999999963 3
Q ss_pred cccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHH
Q 003824 484 GMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 535 (793)
Q Consensus 484 ~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 535 (793)
...++..||+++.+ +..+..+ +..||..+.++++.+.|.+..|+..+.+.+
T Consensus 476 ~~~~~~~Ad~vi~~~~~~~l~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 476 SDVAIEAADIVLLNDDLSSLPTA-IDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred CHHHHHhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33477899999995 5558887 899999999999999999999998765554
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=287.81 Aligned_cols=357 Identities=22% Similarity=0.289 Sum_probs=256.7
Q ss_pred cCCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcc
Q 003824 3 YEETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDK 82 (793)
Q Consensus 3 ~~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (793)
|+.++-++++++..++|..|.||++..|||||+|-|.=.-.+....+
T Consensus 278 dRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~--------------------------------- 324 (681)
T COG2216 278 DRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVP--------------------------------- 324 (681)
T ss_pred hHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCC---------------------------------
Confidence 66778899999999999999999999999999996543222221111
Q ss_pred cccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCc
Q 003824 83 ASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQT 162 (793)
Q Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~ 162 (793)
....+++..+..+++-. -+.|.-..+|+.|++.|+....+...
T Consensus 325 -----------------------gv~~~~la~aa~lsSl~--------------DeTpEGrSIV~LA~~~~~~~~~~~~~ 367 (681)
T COG2216 325 -----------------------GVSEEELADAAQLASLA--------------DETPEGRSIVELAKKLGIELREDDLQ 367 (681)
T ss_pred -----------------------CCCHHHHHHHHHHhhhc--------------cCCCCcccHHHHHHHhccCCCccccc
Confidence 01123455555555332 24788889999999998655431100
Q ss_pred eeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHh
Q 003824 163 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYAD 242 (793)
Q Consensus 163 ~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 242 (793)
. .-...||+.+.|...+-.. ++ .-+.|||.+.|.......+...++++....++-++
T Consensus 368 ----------------~---~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~ 424 (681)
T COG2216 368 ----------------S---HAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSR 424 (681)
T ss_pred ----------------c---cceeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHh
Confidence 0 1245799888766665544 33 56789999999999887766788899999999999
Q ss_pred ccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCe
Q 003824 243 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIK 322 (793)
Q Consensus 243 ~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIk 322 (793)
.|-..|+++ .|-.++|++.++|-+++|.+|-+.+||+.|||
T Consensus 425 ~GGTPL~V~---------------------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIk 465 (681)
T COG2216 425 LGGTPLVVV---------------------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIK 465 (681)
T ss_pred cCCCceEEE---------------------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCe
Confidence 999999999 57789999999999999999999999999999
Q ss_pred EEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeE
Q 003824 323 LWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLA 402 (793)
Q Consensus 323 v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (793)
.+|+||||+.||..||.+.|+..
T Consensus 466 TvM~TGDN~~TAa~IA~EAGVDd--------------------------------------------------------- 488 (681)
T COG2216 466 TVMITGDNPLTAAAIAAEAGVDD--------------------------------------------------------- 488 (681)
T ss_pred EEEEeCCCHHHHHHHHHHhCchh---------------------------------------------------------
Confidence 99999999999999999999732
Q ss_pred EEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEec-c
Q 003824 403 LIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGIS-G 481 (793)
Q Consensus 403 lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~-g 481 (793)
..+.++|++|..+|+.-|. .|+.|+|+|||.||+|+|.+||||++|. |
T Consensus 489 ------------------------------fiAeatPEdK~~~I~~eQ~-~grlVAMtGDGTNDAPALAqAdVg~AMNsG 537 (681)
T COG2216 489 ------------------------------FIAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQADVGVAMNSG 537 (681)
T ss_pred ------------------------------hhhcCChHHHHHHHHHHHh-cCcEEEEcCCCCCcchhhhhcchhhhhccc
Confidence 5678999999999999998 8999999999999999999999999993 4
Q ss_pred CCcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHH---HHHHHHHHHHhcccC------cccch
Q 003824 482 VEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAF---GFTLFFFEAYASFSG------QPVYN 550 (793)
Q Consensus 482 ~~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~---~~~~~~~~~~~~~s~------~~~~~ 550 (793)
+.. ||++++.+=.|-+. |... +.-|++..-.-..+..|++...++- +++.+++.++..... .++.+
T Consensus 538 TqA--AkEAaNMVDLDS~PTKliev-V~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~l~~lNiM~L~sP~S 614 (681)
T COG2216 538 TQA--AKEAANMVDLDSNPTKLIEV-VEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAYPQLGALNIMHLHSPQS 614 (681)
T ss_pred cHH--HHHhhcccccCCCccceehH-hhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhcccccceeecccCCcHH
Confidence 433 89999999777554 3333 4457766544444445555444332 334444444421111 11112
Q ss_pred h-HHHHHHHHhh--ccccceeeecccCCCChHHhh
Q 003824 551 D-WFLSLYNVFF--TSLPVIALGVFDQDVSARFCL 582 (793)
Q Consensus 551 ~-~~~l~~n~~~--~~lp~l~l~~~~~~~~~~~~~ 582 (793)
. ..-+.||.+. ..+|.-.-|+-.++.+...++
T Consensus 615 AilSAlIfNAlIIv~LIPLAlkGVkyk~~~a~~lL 649 (681)
T COG2216 615 AILSALIFNALIIVALIPLALKGVKYKPLSASALL 649 (681)
T ss_pred HHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHHH
Confidence 2 2234566544 234544555655555554444
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=307.17 Aligned_cols=288 Identities=24% Similarity=0.311 Sum_probs=218.2
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
..++++++|+.+.+|.||++++||||||||||+|+|++.++...+.. .
T Consensus 258 aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~-----~--------------------------- 305 (562)
T TIGR01511 258 AAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR-----D--------------------------- 305 (562)
T ss_pred HHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC-----C---------------------------
Confidence 45789999999999999999999999999999999999987542210 0
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCcee
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI 164 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~ 164 (793)
.++++..++. + +..+.||.+.|+++++++.|.....
T Consensus 306 ------------------------~~~~l~~aa~---~-----------e~~s~HPia~Ai~~~~~~~~~~~~~------ 341 (562)
T TIGR01511 306 ------------------------RTELLALAAA---L-----------EAGSEHPLAKAIVSYAKEKGITLVE------ 341 (562)
T ss_pred ------------------------HHHHHHHHHH---H-----------hccCCChHHHHHHHHHHhcCCCcCC------
Confidence 0122222221 1 1124699999999999887653211
Q ss_pred EEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhcc
Q 003824 165 SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAG 244 (793)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 244 (793)
+ ..++. + ..+.+...+ +| ..+..|+++.+.+. +.. +.++..+|
T Consensus 342 -~------------~~~~~---~----~g~Gi~~~~---~g--~~~~iG~~~~~~~~----~~~--------~~~~~~~g 384 (562)
T TIGR01511 342 -V------------SDFKA---I----PGIGVEGTV---EG--TKIQLGNEKLLGEN----AIK--------IDGKAEQG 384 (562)
T ss_pred -C------------CCeEE---E----CCceEEEEE---CC--EEEEEECHHHHHhC----CCC--------CChhhhCC
Confidence 0 01110 0 012222222 23 23456888765321 111 11235789
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEE
Q 003824 245 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 324 (793)
Q Consensus 245 ~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~ 324 (793)
.+++.++ .|.+++|.++++|+++|+++++|+.|++.|++++
T Consensus 385 ~~~~~~~---------------------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ 425 (562)
T TIGR01511 385 STSVLVA---------------------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPV 425 (562)
T ss_pred CEEEEEE---------------------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEE
Confidence 9988887 5789999999999999999999999999999999
Q ss_pred EEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEE
Q 003824 325 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALI 404 (793)
Q Consensus 325 mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 404 (793)
|+|||+..++..+++++|+-
T Consensus 426 ilSgd~~~~a~~ia~~lgi~------------------------------------------------------------ 445 (562)
T TIGR01511 426 MLTGDNRKTAKAVAKELGIN------------------------------------------------------------ 445 (562)
T ss_pred EEcCCCHHHHHHHHHHcCCc------------------------------------------------------------
Confidence 99999999999999999871
Q ss_pred EeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCc
Q 003824 405 IDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG 484 (793)
Q Consensus 405 i~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~ 484 (793)
++++..|++|..+++.++. .++.|+|+|||.||++|++.||+||+++.. .
T Consensus 446 ----------------------------~~~~~~p~~K~~~v~~l~~-~~~~v~~VGDg~nD~~al~~A~vgia~g~g-~ 495 (562)
T TIGR01511 446 ----------------------------VRAEVLPDDKAALIKELQE-KGRVVAMVGDGINDAPALAQADVGIAIGAG-T 495 (562)
T ss_pred ----------------------------EEccCChHHHHHHHHHHHH-cCCEEEEEeCCCccHHHHhhCCEEEEeCCc-C
Confidence 4566789999999999998 788999999999999999999999999643 2
Q ss_pred ccccccCCeeec--chhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHH
Q 003824 485 MQAVMSSDIAIA--QFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 535 (793)
Q Consensus 485 ~~a~~~aD~~i~--~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 535 (793)
..++.+||+++. +...+..+ +..||..+.++++.+.+.+..|++.+.+.+
T Consensus 496 ~~a~~~Advvl~~~~l~~l~~~-i~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 496 DVAIEAADVVLMRNDLNDVATA-IDLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred HHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347889999997 46668887 899999999999999999999987665444
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-31 Score=305.09 Aligned_cols=279 Identities=21% Similarity=0.257 Sum_probs=214.1
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
..++++++|+++.+|.||+++++|||||||||+|+|++.++...
T Consensus 227 ~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~------------------------------------ 270 (536)
T TIGR01512 227 AARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA------------------------------------ 270 (536)
T ss_pred HHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH------------------------------------
Confidence 46789999999999999999999999999999999999876320
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCcee
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI 164 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~ 164 (793)
+++...+.+ + ..+.||.+.|+++++++.+ .+ +
T Consensus 271 --------------------------~~l~~a~~~-----e---------~~~~hp~~~Ai~~~~~~~~-~~-----~-- 302 (536)
T TIGR01512 271 --------------------------EVLRLAAAA-----E---------QASSHPLARAIVDYARKRE-NV-----E-- 302 (536)
T ss_pred --------------------------HHHHHHHHH-----h---------ccCCCcHHHHHHHHHHhcC-CC-----c--
Confidence 122222211 1 1246999999999998754 00 0
Q ss_pred EEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhcc
Q 003824 165 SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAG 244 (793)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 244 (793)
..+ .+| .+.+...+ +|.. +..|+++.+.+. + ...+..+|
T Consensus 303 ---------------~~~---~~~----g~gi~~~~---~g~~--~~ig~~~~~~~~----~----------~~~~~~~~ 341 (536)
T TIGR01512 303 ---------------SVE---EVP----GEGVRAVV---DGGE--VRIGNPRSLEAA----V----------GARPESAG 341 (536)
T ss_pred ---------------ceE---Eec----CCeEEEEE---CCeE--EEEcCHHHHhhc----C----------CcchhhCC
Confidence 000 011 11222222 2332 234776544221 1 01456678
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCC-eE
Q 003824 245 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGI-KL 323 (793)
Q Consensus 245 ~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agI-kv 323 (793)
.+++.++ .|..++|.+.++|+++|+++++|+.|+++|+ ++
T Consensus 342 ~~~~~v~---------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v 382 (536)
T TIGR01512 342 KTIVHVA---------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKV 382 (536)
T ss_pred CeEEEEE---------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcE
Confidence 8887766 5789999999999999999999999999999 99
Q ss_pred EEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEE
Q 003824 324 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 403 (793)
Q Consensus 324 ~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 403 (793)
+|+|||+..++..+++++|+..
T Consensus 383 ~vvTgd~~~~a~~i~~~lgi~~---------------------------------------------------------- 404 (536)
T TIGR01512 383 VMLTGDRRAVAERVARELGIDE---------------------------------------------------------- 404 (536)
T ss_pred EEEcCCCHHHHHHHHHHcCChh----------------------------------------------------------
Confidence 9999999999999999999721
Q ss_pred EEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCC
Q 003824 404 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 483 (793)
Q Consensus 404 vi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~ 483 (793)
++++..|++|..+++.++. .++.|+|+|||.||++|++.||+||+++...
T Consensus 405 -----------------------------~f~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~~~ 454 (536)
T TIGR01512 405 -----------------------------VHAELLPEDKLEIVKELRE-KYGPVAMVGDGINDAPALAAADVGIAMGASG 454 (536)
T ss_pred -----------------------------hhhccCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHHhCCEEEEeCCCc
Confidence 5677789999999999988 7899999999999999999999999996233
Q ss_pred cccccccCCeee--cchhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHH
Q 003824 484 GMQAVMSSDIAI--AQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFF 536 (793)
Q Consensus 484 ~~~a~~~aD~~i--~~f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~ 536 (793)
...++.+||+++ .++..+.++ +..||..+.++++.+.|.+..|++.+.+.++
T Consensus 455 ~~~~~~~ad~vl~~~~l~~l~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 455 SDVAIETADVVLLNDDLSRLPQA-IRLARRTRRIVKQNVVIALGIILLLILLALF 508 (536)
T ss_pred cHHHHHhCCEEEECCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334788999999 457778887 8999999999999999999999876655543
|
. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-30 Score=313.11 Aligned_cols=294 Identities=21% Similarity=0.235 Sum_probs=223.4
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
..++++++|+.+.+|+||+++++|||||||||+|+|++.++...+.. .+
T Consensus 498 ~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-----~~-------------------------- 546 (834)
T PRK10671 498 AAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV-----DE-------------------------- 546 (834)
T ss_pred HHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC-----CH--------------------------
Confidence 45789999999999999999999999999999999999887532210 00
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCcee
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI 164 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~ 164 (793)
.+.+-.+.+++. .+.||.+.|+++++...+.. .
T Consensus 547 ------------------------~~~l~~a~~~e~---------------~s~hp~a~Ai~~~~~~~~~~--~------ 579 (834)
T PRK10671 547 ------------------------AQALRLAAALEQ---------------GSSHPLARAILDKAGDMTLP--Q------ 579 (834)
T ss_pred ------------------------HHHHHHHHHHhC---------------CCCCHHHHHHHHHHhhCCCC--C------
Confidence 011122233331 14699999999988643210 0
Q ss_pred EEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhcc
Q 003824 165 SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAG 244 (793)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 244 (793)
+ ..++.+. .+.+...+ +|. .+.+|+++.+.+. + ...+.+...++++..+|
T Consensus 580 -~------------~~~~~~~-------g~Gv~~~~---~g~--~~~~G~~~~~~~~----~-~~~~~~~~~~~~~~~~g 629 (834)
T PRK10671 580 -V------------NGFRTLR-------GLGVSGEA---EGH--ALLLGNQALLNEQ----Q-VDTKALEAEITAQASQG 629 (834)
T ss_pred -c------------ccceEec-------ceEEEEEE---CCE--EEEEeCHHHHHHc----C-CChHHHHHHHHHHHhCC
Confidence 0 1111100 01111111 343 3456998876431 1 11244566677888999
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEE
Q 003824 245 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 324 (793)
Q Consensus 245 ~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~ 324 (793)
.+++.+| .|..++|+++++|++||+++++|+.|++.|++++
T Consensus 630 ~~~v~va---------------------------------------~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~ 670 (834)
T PRK10671 630 ATPVLLA---------------------------------------VDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLV 670 (834)
T ss_pred CeEEEEE---------------------------------------ECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEE
Confidence 9999998 3557899999999999999999999999999999
Q ss_pred EEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEE
Q 003824 325 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALI 404 (793)
Q Consensus 325 mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 404 (793)
|+|||+..+|..+++++|+..
T Consensus 671 ~~Tgd~~~~a~~ia~~lgi~~----------------------------------------------------------- 691 (834)
T PRK10671 671 MLTGDNPTTANAIAKEAGIDE----------------------------------------------------------- 691 (834)
T ss_pred EEcCCCHHHHHHHHHHcCCCE-----------------------------------------------------------
Confidence 999999999999999999731
Q ss_pred EeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCc
Q 003824 405 IDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG 484 (793)
Q Consensus 405 i~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~ 484 (793)
+++++.|++|..+++.++. .++.|+|+|||.||++|++.||+||+|++. .
T Consensus 692 ----------------------------~~~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~Agvgia~g~g-~ 741 (834)
T PRK10671 692 ----------------------------VIAGVLPDGKAEAIKRLQS-QGRQVAMVGDGINDAPALAQADVGIAMGGG-S 741 (834)
T ss_pred ----------------------------EEeCCCHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHHHhCCeeEEecCC-C
Confidence 6778889999999999997 788999999999999999999999999643 3
Q ss_pred ccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHH
Q 003824 485 MQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLF 535 (793)
Q Consensus 485 ~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~ 535 (793)
..++++||+++.+ +..+..+ +..||..+.++++.+.+.+..|++.+.+.+
T Consensus 742 ~~a~~~ad~vl~~~~~~~i~~~-i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 742 DVAIETAAITLMRHSLMGVADA-LAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4488999999986 4447777 899999999999999999999987765443
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-22 Score=205.26 Aligned_cols=97 Identities=33% Similarity=0.532 Sum_probs=90.1
Q ss_pred CceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHH
Q 003824 292 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSA 371 (793)
Q Consensus 292 ~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 371 (793)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..+|..+|+.+||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 78999999999999999999999999999999999999999999999999982
Q ss_pred HHHHHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcC--ChhhH--HHHHH
Q 003824 372 AAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS--SPKQK--ALVTR 447 (793)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~--sP~qK--~~iv~ 447 (793)
+..+++++ +|++| ..+++
T Consensus 168 ----------------------------------------------------------~~~v~a~~~~kP~~k~~~~~i~ 189 (215)
T PF00702_consen 168 ----------------------------------------------------------DSIVFARVIGKPEPKIFLRIIK 189 (215)
T ss_dssp ----------------------------------------------------------SEEEEESHETTTHHHHHHHHHH
T ss_pred ----------------------------------------------------------cccccccccccccchhHHHHHH
Confidence 12489999 99999 99999
Q ss_pred HHHhcCCCeEEEEcCCccChhhhhhcc
Q 003824 448 LVKTKTSSTTLAIGDGANDVGMLQEAD 474 (793)
Q Consensus 448 ~lk~~~~~~vlaiGDG~ND~~ml~~Ad 474 (793)
.++. .+..|+|+|||.||++|+++||
T Consensus 190 ~l~~-~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 190 ELQV-KPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHTC-TGGGEEEEESSGGHHHHHHHSS
T ss_pred HHhc-CCCEEEEEccCHHHHHHHHhCc
Confidence 9985 4559999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-15 Score=131.35 Aligned_cols=90 Identities=33% Similarity=0.554 Sum_probs=70.8
Q ss_pred HhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeEEeEeeCCCCCCceE
Q 003824 117 AICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRM 196 (793)
Q Consensus 117 alc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrm 196 (793)
+|||++....+++.+..+ ..|+|+|.||++++.+.|..... ...+..|++++.+||||+||||
T Consensus 1 ~LCn~a~~~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~~----------------~~~~~~~~~~~~~pF~S~rK~m 63 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEE-IIGDPTEKALLRFAKKLGVGIDI----------------KEIRSKYKIVAEIPFDSERKRM 63 (91)
T ss_pred CCccccEeecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCcH----------------HHHHhhcceeEEEccCccccee
Confidence 589999886554333322 46799999999999999654321 1134789999999999999999
Q ss_pred EEEEEcCCCcEEEEEecCchHhHHHHhh
Q 003824 197 SVIVRSEEGTLLLLSKGADSVMFERLAE 224 (793)
Q Consensus 197 sviv~~~~~~~~l~~KGa~~~i~~~~~~ 224 (793)
+||++ .++.+++|+|||||.|+++|+.
T Consensus 64 svv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 64 SVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999 3346788999999999999974
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.8e-14 Score=121.67 Aligned_cols=126 Identities=24% Similarity=0.398 Sum_probs=108.8
Q ss_pred ceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHH
Q 003824 293 LILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAA 372 (793)
Q Consensus 293 l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 372 (793)
....+.++---++-++|+++|+.|++. ++|.+.|||..-+....|.-.|+-..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 456788888889999999999999999 99999999999999999988886321
Q ss_pred HHHHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc
Q 003824 373 AAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK 452 (793)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~ 452 (793)
.+++-..|+.|+.+++-||+
T Consensus 72 -----------------------------------------------------------rv~a~a~~e~K~~ii~eLkk- 91 (152)
T COG4087 72 -----------------------------------------------------------RVFAGADPEMKAKIIRELKK- 91 (152)
T ss_pred -----------------------------------------------------------eeecccCHHHHHHHHHHhcC-
Confidence 18888999999999999998
Q ss_pred CCCeEEEEcCCccChhhhhhcceeEEeccCCccc--ccccCCeeecchhhHHHHH
Q 003824 453 TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQ--AVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 453 ~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~--a~~~aD~~i~~f~~l~~ll 505 (793)
+++.|.|+|||+||.+||++||+||..-++++.. +..+||+++.+.+-+..++
T Consensus 92 ~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 92 RYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred CCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 8999999999999999999999999655555532 3488999999988777664
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.1e-12 Score=129.58 Aligned_cols=173 Identities=13% Similarity=0.082 Sum_probs=128.1
Q ss_pred ccchhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 003824 547 PVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQ 626 (793)
Q Consensus 547 ~~~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 626 (793)
.++++.|++|.|++.+.+|+++++.++ ++++.|.++|+ ++++++++++.+..++..|+++++++++.+++....
T Consensus 2 ~Pl~~~qiL~inli~d~~~a~al~~e~--~~~~im~r~Pr----~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~ 75 (182)
T PF00689_consen 2 LPLTPIQILWINLITDLLPALALGFEP--PDPDIMKRPPR----DPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI 75 (182)
T ss_dssp -SS-HHHHHHHHHTTTHHHHHHGGGSS---STTGGGS-------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcCc--chhhhhhcccc----ccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 358999999999999999999999864 44455555555 788999999999999999999999999888776552
Q ss_pred ccccCCCceeehhhHHHHHHHHHHHHHHHHHHHHhcc--------hhhHHHHHHHHHHHHHHHHHHHHhccCccccchhH
Q 003824 627 QAFRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTY--------FTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAY 698 (793)
Q Consensus 627 ~~~~~~g~~~~~~~~~t~~f~~~v~~~~~~~~l~~~~--------~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~ 698 (793)
.+....+.........|++|+++++.+.+... ..++ ...+.|..+++++++.++++++..++|. ++.
T Consensus 76 ~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~-~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~-~~~--- 150 (182)
T PF00689_consen 76 FGWDEETNNDNLAQAQTMAFTALVLSQLFNAF-NCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPG-LNR--- 150 (182)
T ss_dssp TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHH-HTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTT-HHH---
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHhhhc-ccccccccceecccccccchHHHHHHHHHHHHHHHhcchh-hHh---
Confidence 11111111112456889999999998888765 3333 2345788999999999999999999985 344
Q ss_pred HHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHH
Q 003824 699 KVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAI 732 (793)
Q Consensus 699 ~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~ 732 (793)
+|+..+.++..|+.+++.+++.++.+++.|++
T Consensus 151 --~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 151 --IFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp --HST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred --hhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 67788899999999999999999999999875
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=9.5e-10 Score=115.96 Aligned_cols=61 Identities=20% Similarity=0.278 Sum_probs=50.4
Q ss_pred cCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 436 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 436 r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
.+.|. .|+.-++.+.++.| +.|++||||.||++||+.|++||+|++.. ..+|.+||++..+
T Consensus 189 eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~-~~vK~~A~~vt~~ 254 (270)
T PRK10513 189 EILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAI-PSVKEVAQFVTKS 254 (270)
T ss_pred EEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCcc-HHHHHhcCeeccC
Confidence 44444 69988888877655 67999999999999999999999996654 4489999999865
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.2e-08 Score=107.08 Aligned_cols=186 Identities=17% Similarity=0.205 Sum_probs=101.4
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc----ccCceEEEEccCCCcccccchhhhHHHHHHHHHH-H
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSETPESKTLEKSEDKSAAAAALKA-S 379 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~ 379 (793)
+.+.+.++|+++++.|+++.++||++...+..+.+++++- ..++..+...++......++.......+...... .
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 8889999999999999999999999999999999999974 3344433333222222222222211111111000 0
Q ss_pred HHHHHhhhhh-ccc------c-ccC-------------CCCC-eEEEEeCchhhHhhhhhHHHHHHHHHhcCC--eeEEE
Q 003824 380 VLHQLIRGKE-LLD------S-SNE-------------SLGP-LALIIDGKSLTYALEDDVKDLFLELAIGCA--SVICC 435 (793)
Q Consensus 380 ~~~~~~~~~~-~~~------~-~~~-------------~~~~-~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~--~vi~~ 435 (793)
.......... ... . ... .... ..+.++- ..+.+.+....+...+. ...+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~ 174 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDK------DHEILEELVEALRKRFPDLGLTVS 174 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEec------ChHhHHHHHHHHhhhccccceEEE
Confidence 0000000000 000 0 000 0000 0001100 00111111111221111 23333
Q ss_pred cCCh-------h--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 436 RSSP-------K--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 436 r~sP-------~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
+..+ . .|+..++.+.++.| ..|+||||+.||.+||+.|+.||+|.+. ...++..||++...
T Consensus 175 ~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na-~~~~k~~A~~vt~~ 247 (264)
T COG0561 175 SSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA-DEELKELADYVTTS 247 (264)
T ss_pred EcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC-CHHHHhhCCcccCC
Confidence 3333 3 69988888887655 4599999999999999999999999776 45589999976554
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.1e-09 Score=113.45 Aligned_cols=199 Identities=17% Similarity=0.114 Sum_probs=105.0
Q ss_pred CceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc----ccCceEEE-EccCCCcccccchh
Q 003824 292 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVI-ISSETPESKTLEKS 366 (793)
Q Consensus 292 ~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~----~~~~~~~~-i~~~~~~~~~~~~~ 366 (793)
|.||+.- ...+.+.+.++|++|+++|++++++||++...+..+..++++. ..++..+. .++.......+..+
T Consensus 10 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~ 86 (272)
T PRK15126 10 DGTLLMP---DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD 86 (272)
T ss_pred CCcCcCC---CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH
Confidence 4455531 2348889999999999999999999999999999999998863 23333332 11111111222222
Q ss_pred hhHHHHHHHHHHHH-------------------HHHHhhhhhccccc--c--CCCCCeEEEEeCchhhHhhhhhHHHHHH
Q 003824 367 EDKSAAAAALKASV-------------------LHQLIRGKELLDSS--N--ESLGPLALIIDGKSLTYALEDDVKDLFL 423 (793)
Q Consensus 367 ~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~--~--~~~~~~~lvi~G~~l~~~~~~~~~~~~~ 423 (793)
...+.+........ .............. . .......+.+-+.. + .+ +++...+.
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~-~-~~-~~~~~~l~ 163 (272)
T PRK15126 87 VAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDH-D-DL-TRLQIQLN 163 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCH-H-HH-HHHHHHHH
Confidence 22222211110000 00000000000000 0 00001111111111 0 00 11222221
Q ss_pred HHHh-cCCe----eEEEcCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCe
Q 003824 424 ELAI-GCAS----VICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 493 (793)
Q Consensus 424 ~l~~-~~~~----vi~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~ 493 (793)
.... .... .-+..++|. .|+.-++.+.++.| ..|++||||.||++||+.|+.||+|++.. ..+|.+||+
T Consensus 164 ~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~-~~vK~~A~~ 242 (272)
T PRK15126 164 EALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAM-PQLRAELPH 242 (272)
T ss_pred HHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCCh-HHHHHhCCC
Confidence 1110 0010 113455565 59999998887655 67999999999999999999999996654 448999986
Q ss_pred --eecc
Q 003824 494 --AIAQ 497 (793)
Q Consensus 494 --~i~~ 497 (793)
++.+
T Consensus 243 ~~v~~~ 248 (272)
T PRK15126 243 LPVIGH 248 (272)
T ss_pred CeecCC
Confidence 4443
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.7e-08 Score=103.68 Aligned_cols=182 Identities=16% Similarity=0.158 Sum_probs=98.4
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc----ccCceEEEEccCCCcccccchhhhHHHHHHHHHHHH
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 380 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (793)
+.+.+.++|++|++.|++++++||++...+..+++.+++- ..++..+....................+. ..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~-----~~ 95 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYS-----EL 95 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHH-----HH
Confidence 7789999999999999999999999999999999888863 23333332221111101000011111111 11
Q ss_pred HHHHhhhhhccccccCCCCCeEEE-EeCchhhHhhhhhHHHHHHHHHh---cCCeeEEEcCChh--hHHHHHHHHHhcCC
Q 003824 381 LHQLIRGKELLDSSNESLGPLALI-IDGKSLTYALEDDVKDLFLELAI---GCASVICCRSSPK--QKALVTRLVKTKTS 454 (793)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~lv-i~G~~l~~~~~~~~~~~~~~l~~---~~~~vi~~r~sP~--qK~~iv~~lk~~~~ 454 (793)
..........+...........+. ...... +...+.+..... ......+....|. .|+..++.+.++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~ 170 (230)
T PRK01158 96 KKRFPEASTSLTKLDPDYRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMG 170 (230)
T ss_pred HHhccccceeeecCCcccccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhC
Confidence 011100000010000000001111 111111 112222221110 0011123345554 48888888876544
Q ss_pred ---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 455 ---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 455 ---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
..+++||||.||.+|++.|++||+|.+... .+|..||++..+
T Consensus 171 i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~-~vk~~a~~v~~~ 215 (230)
T PRK01158 171 IDPEEVAAIGDSENDLEMFEVAGFGVAVANADE-ELKEAADYVTEK 215 (230)
T ss_pred CCHHHEEEECCchhhHHHHHhcCceEEecCccH-HHHHhcceEecC
Confidence 579999999999999999999999966554 488999998865
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.82 E-value=5e-08 Score=97.92 Aligned_cols=112 Identities=22% Similarity=0.251 Sum_probs=85.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
.++.|++.+.++.++++|.+||++||-...-+..+|+.+|+...-...+...+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC--------------------------
Confidence 789999999999999999999999999999999999999986543332222210
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC---CeEEE
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLA 459 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vla 459 (793)
+++|. ++.-.+..+.|...++.+.+..| +.+.|
T Consensus 130 ---------------------~ltG~-----------------------v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a 165 (212)
T COG0560 130 ---------------------KLTGR-----------------------VVGPICDGEGKAKALRELAAELGIPLEETVA 165 (212)
T ss_pred ---------------------EEece-----------------------eeeeecCcchHHHHHHHHHHHcCCCHHHeEE
Confidence 22332 23344555778877765555445 46999
Q ss_pred EcCCccChhhhhhcceeEEeccCCc
Q 003824 460 IGDGANDVGMLQEADIGVGISGVEG 484 (793)
Q Consensus 460 iGDG~ND~~ml~~AdvGI~i~g~~~ 484 (793)
+|||.||.|||+.|+.+|++.....
T Consensus 166 ~gDs~nDlpml~~ag~~ia~n~~~~ 190 (212)
T COG0560 166 YGDSANDLPMLEAAGLPIAVNPKPK 190 (212)
T ss_pred EcCchhhHHHHHhCCCCeEeCcCHH
Confidence 9999999999999999999976654
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.4e-09 Score=109.92 Aligned_cols=63 Identities=24% Similarity=0.256 Sum_probs=49.7
Q ss_pred EEcCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCC--eeecc
Q 003824 434 CCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD--IAIAQ 497 (793)
Q Consensus 434 ~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD--~~i~~ 497 (793)
+..+.|. .|+.-++.+.++.| ..|++||||.||++||+.|+.||+|++... .+|..|| +++.+
T Consensus 181 ~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~-~vK~~A~~~~v~~~ 250 (266)
T PRK10976 181 CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQ-RLKDLLPELEVIGS 250 (266)
T ss_pred eEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcH-HHHHhCCCCeeccc
Confidence 3455554 59999988877655 679999999999999999999999966544 4888887 56554
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.74 E-value=5e-08 Score=97.45 Aligned_cols=126 Identities=19% Similarity=0.147 Sum_probs=90.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.|++.+.|+.+++.| ++.++||-....+..+++.+|+..--...+.+++..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g-------------------------- 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC--------------------------
Confidence 57999999999999975 999999999999999999999842111101111000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
.++|. .. ..+..|..+++.+++ .+..+.++|||
T Consensus 121 --------------------~~tG~------------------------~~--~~~~~K~~~l~~l~~-~~~~~v~vGDs 153 (203)
T TIGR02137 121 --------------------RVVGY------------------------QL--RQKDPKRQSVIAFKS-LYYRVIAAGDS 153 (203)
T ss_pred --------------------eeECe------------------------ee--cCcchHHHHHHHHHh-hCCCEEEEeCC
Confidence 11221 11 346789999999976 67789999999
Q ss_pred ccChhhhhhcceeEEeccCCcccccccCCeeecc-hhhHHHH
Q 003824 464 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ-FRFLERL 504 (793)
Q Consensus 464 ~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~-f~~l~~l 504 (793)
.||.+|++.|++||++..++.. ...+-|+.... +..+...
T Consensus 154 ~nDl~ml~~Ag~~ia~~ak~~~-~~~~~~~~~~~~~~~~~~~ 194 (203)
T TIGR02137 154 YNDTTMLSEAHAGILFHAPENV-IREFPQFPAVHTYEDLKRE 194 (203)
T ss_pred HHHHHHHHhCCCCEEecCCHHH-HHhCCCCCcccCHHHHHHH
Confidence 9999999999999999887764 34444665443 5555555
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.9e-08 Score=104.99 Aligned_cols=129 Identities=23% Similarity=0.229 Sum_probs=90.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.||+.+.|+.|++.|+++.++||.....+..+...+|+...-...+.+...
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------------------------- 233 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------------------------- 233 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC---------------------------
Confidence 58999999999999999999999999988888888888873211111111000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC---CeEEEE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAI 460 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vlai 460 (793)
.++|... ..-+..+.|..+++.+.++.| ..|+||
T Consensus 234 --------------------~ltg~v~-----------------------g~iv~~k~K~~~L~~la~~lgi~~~qtIaV 270 (322)
T PRK11133 234 --------------------KLTGNVL-----------------------GDIVDAQYKADTLTRLAQEYEIPLAQTVAI 270 (322)
T ss_pred --------------------EEEeEec-----------------------CccCCcccHHHHHHHHHHHcCCChhhEEEE
Confidence 1111100 001234678888888776544 689999
Q ss_pred cCCccChhhhhhcceeEEeccCCcccccccCCeeecchhhHHHHH
Q 003824 461 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 461 GDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~l~~ll 505 (793)
|||.||.+|++.|++||++...+ ..+..||.++. +..|..+|
T Consensus 271 GDg~NDl~m~~~AGlgiA~nAkp--~Vk~~Ad~~i~-~~~l~~~l 312 (322)
T PRK11133 271 GDGANDLPMIKAAGLGIAYHAKP--KVNEQAQVTIR-HADLMGVL 312 (322)
T ss_pred ECCHHHHHHHHHCCCeEEeCCCH--HHHhhCCEEec-CcCHHHHH
Confidence 99999999999999999994443 37889999996 44454443
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.8e-08 Score=101.73 Aligned_cols=179 Identities=17% Similarity=0.202 Sum_probs=96.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc----cccCceEEEEccCCCc--ccccchhhhHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIISSETPE--SKTLEKSEDKSAAAAALK 377 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi----~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~ 377 (793)
.+.+.+.++|++|+++||+++++||++...+..+++.+|+ +..++..+........ ...+...........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~--- 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA--- 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh---
Confidence 3778889999999999999999999999999999999884 2222222222111000 000111000000000
Q ss_pred HHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcC---CeeEEEcCCh--hhHHHHHHHHHhc
Q 003824 378 ASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGC---ASVICCRSSP--KQKALVTRLVKTK 452 (793)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~---~~vi~~r~sP--~qK~~iv~~lk~~ 452 (793)
.......+............+......+ ........+.... ....+....| ..|+..++.+.++
T Consensus 92 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~ 160 (225)
T TIGR01482 92 ------KTFPFSRLKVQYPRRASLVKMRYGIDVD-----TVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEK 160 (225)
T ss_pred ------cccchhhhccccccccceEEEeecCCHH-----HHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHH
Confidence 0000000000000001111111111111 1111111111100 0112334444 3788888887665
Q ss_pred CC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 453 TS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 453 ~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
.+ ..+++|||+.||++|++.|++|++|.+... .++..||++..+
T Consensus 161 ~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~-~~k~~A~~vt~~ 207 (225)
T TIGR01482 161 LGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQP-ELKEWADYVTES 207 (225)
T ss_pred hCCCHHHEEEECCCHhhHHHHHhcCceEEcCChhH-HHHHhcCeecCC
Confidence 44 679999999999999999999999976544 488999998764
|
catalyze the same reaction as SPP. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.7e-08 Score=98.66 Aligned_cols=178 Identities=17% Similarity=0.228 Sum_probs=98.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc----ccCceEEEEccCCCcccccchhhhHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQVIISSETPESKTLEKSEDKSAAAAALKAS 379 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (793)
++.+++.++|++|+++|++++++||++...+..+++.+++- ..++..+...... ................ .
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~---~~~~~~~~~~~~~~~~-~- 92 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKED---IFLANMEEEWFLDEEK-K- 92 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCc---EEEecccchhhHHHhh-h-
Confidence 38889999999999999999999999999999999988763 2233333322211 1111100000000000 0
Q ss_pred HHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhc-CCeeEEEcCCh--hhHHHHHHHHHhcCC--
Q 003824 380 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG-CASVICCRSSP--KQKALVTRLVKTKTS-- 454 (793)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~-~~~vi~~r~sP--~qK~~iv~~lk~~~~-- 454 (793)
..... ...... .......+..+++... .+...+...... .....+..++| ..|+..++.+.+..+
T Consensus 93 --~~~~~--~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~ 162 (215)
T TIGR01487 93 --KRFPR--DRLSNE-YPRASLVIMREGKDVD-----EVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIK 162 (215)
T ss_pred --hhhhh--hhcccc-cceeEEEEecCCccHH-----HHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCC
Confidence 00000 000000 0011112222222221 111111111000 00001223333 479988888876544
Q ss_pred -CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 455 -STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 455 -~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
..+++|||+.||.+|++.|++|++|.+.. ..++..||++..+
T Consensus 163 ~~~~i~iGDs~ND~~ml~~ag~~vam~na~-~~~k~~A~~v~~~ 205 (215)
T TIGR01487 163 PEEVAAIGDSENDIDLFRVVGFKVAVANAD-DQLKEIADYVTSN 205 (215)
T ss_pred HHHEEEECCCHHHHHHHHhCCCeEEcCCcc-HHHHHhCCEEcCC
Confidence 46999999999999999999999996654 4488999999864
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.71 E-value=3e-08 Score=113.25 Aligned_cols=61 Identities=28% Similarity=0.403 Sum_probs=50.2
Q ss_pred cCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 436 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 436 r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
.+.|. .|+.-++.+.++.| ..|++||||.||++||+.|++||+|.+... .+|.+||++..+
T Consensus 500 EI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~e-eVK~~Ad~VT~s 565 (580)
T PLN02887 500 EIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAE-KTKAVADVIGVS 565 (580)
T ss_pred EEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCH-HHHHhCCEEeCC
Confidence 44444 69988888887655 579999999999999999999999966544 489999998865
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.2e-08 Score=106.06 Aligned_cols=195 Identities=16% Similarity=0.145 Sum_probs=102.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc----ccCceEE-EEccCCCcccccchhhhHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL----RQGMRQV-IISSETPESKTLEKSEDKSAAAAALKA 378 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~----~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (793)
.+.+.+.++|+.|+++|+++++.||+....+..+..++++- ..++..+ ...++......++.+.....+......
T Consensus 15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 94 (254)
T PF08282_consen 15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKEH 94 (254)
T ss_dssp SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHHT
T ss_pred eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhhc
Confidence 46788999999999999999999999999999999988864 2333333 111111111222222222222211111
Q ss_pred HHHHHHhhhhhcccccc-------------------------CCCCCeEEEEeCch-hhHhhhhhHHHHHHHHHh-cCCe
Q 003824 379 SVLHQLIRGKELLDSSN-------------------------ESLGPLALIIDGKS-LTYALEDDVKDLFLELAI-GCAS 431 (793)
Q Consensus 379 ~~~~~~~~~~~~~~~~~-------------------------~~~~~~~lvi~G~~-l~~~~~~~~~~~~~~l~~-~~~~ 431 (793)
.+...+........... ....-..+.+.++. -...+.+++.+.+..... ....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 174 (254)
T PF08282_consen 95 NISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRSS 174 (254)
T ss_dssp TCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred ccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEec
Confidence 10000000000000000 00011111122111 111111222222221100 0000
Q ss_pred eEEEcCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchh
Q 003824 432 VICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 499 (793)
Q Consensus 432 vi~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~ 499 (793)
.-+..++|. .|+..++.+.++.| +.+++|||+.||.+|++.|+.||+|.+.... .+..||++...-+
T Consensus 175 ~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~-~k~~a~~i~~~~~ 246 (254)
T PF08282_consen 175 PYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE-LKKAADYITPSNN 246 (254)
T ss_dssp TTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH-HHHHSSEEESSGT
T ss_pred ccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH-HHHhCCEEecCCC
Confidence 112334443 69988888876544 6899999999999999999999999766544 8999999887643
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.6e-07 Score=98.95 Aligned_cols=186 Identities=13% Similarity=0.123 Sum_probs=97.7
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc-----ccCceEEEEccCCC-------cccccchhhhHHHH
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL-----RQGMRQVIISSETP-------ESKTLEKSEDKSAA 372 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~-----~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~ 372 (793)
+-+.+.++|++|+++||+++++||+....+..+++++|+- ..|+..+....... ....++.+.....+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 4467889999999999999999999999999999998862 23444333221100 01112222222222
Q ss_pred HHHHHH-HHH---------HHHhhh------hhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCee---E
Q 003824 373 AAALKA-SVL---------HQLIRG------KELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV---I 433 (793)
Q Consensus 373 ~~~~~~-~~~---------~~~~~~------~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~v---i 433 (793)
...... ... ...... ...+.. .......+.+.+..- .+ ..+.+.+... .+..+ -
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~-~~~~~~l~~~--~~~~~~~~~ 177 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALAR--LHEASVTLIWRDSDE--RM-AQFTARLAEL--GLQFVQGAR 177 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHh--ccccCceeEecCCHH--HH-HHHHHHHHHC--CCEEEecCe
Confidence 211111 000 000000 000000 000011122222110 00 1122222210 11111 1
Q ss_pred EEcCChh--hHHHHHHHHHhcCC------CeEEEEcCCccChhhhhhcceeEEeccCCc--cc---ccccCCeeecc
Q 003824 434 CCRSSPK--QKALVTRLVKTKTS------STTLAIGDGANDVGMLQEADIGVGISGVEG--MQ---AVMSSDIAIAQ 497 (793)
Q Consensus 434 ~~r~sP~--qK~~iv~~lk~~~~------~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~--~~---a~~~aD~~i~~ 497 (793)
+..+.|. .|+.-++.+.++.| ..|++||||.||++||+.|++||+|.+... .+ .+..+|++...
T Consensus 178 ~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~ 254 (271)
T PRK03669 178 FWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQR 254 (271)
T ss_pred eEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccC
Confidence 3455553 69988888876533 579999999999999999999999974331 11 23467887665
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=6.2e-08 Score=102.26 Aligned_cols=56 Identities=23% Similarity=0.342 Sum_probs=46.0
Q ss_pred hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 441 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 441 qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
.|+..++.+.++.| +.|++|||+.||++|++.|++||+|++. ....+..||+++.+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna-~~~lk~~Ad~v~~~ 257 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNA-DDAVKARADLVIGD 257 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCc-hHHHHHhCCEEEec
Confidence 58887777665544 5799999999999999999999999654 34478899998865
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.61 E-value=3.6e-07 Score=95.46 Aligned_cols=188 Identities=12% Similarity=0.099 Sum_probs=96.8
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc----cccCceEEEEccCCC-------cccccchhhhHHHHH
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIISSETP-------ESKTLEKSEDKSAAA 373 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi----~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~ 373 (793)
..+.+.++|+.|+++|++++++||+....+..+.+++|+ +..++..+....... ....++.+.....+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 444689999999999999999999999999999999886 444554444322211 111223222222222
Q ss_pred HHHHH-HHHHHH-hh----------h--hhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhc-CCeeEEEcCC
Q 003824 374 AALKA-SVLHQL-IR----------G--KELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG-CASVICCRSS 438 (793)
Q Consensus 374 ~~~~~-~~~~~~-~~----------~--~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~-~~~vi~~r~s 438 (793)
..... +..... .. . ...............++. ..... +.+...+...... ..+..+..+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~s~~~~ei~ 171 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILW-SEERR----ERFTEALVELGLEVTHGNRFYHVL 171 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceec-ChHHH----HHHHHHHHHcCCEEEeCCceEEEe
Confidence 11110 000000 00 0 000000000001111122 11111 1122222211000 0001122333
Q ss_pred hh--hHHHHHHHHHhcC-----CCeEEEEcCCccChhhhhhcceeEEeccCCc--cccccc--C-Ceeecc
Q 003824 439 PK--QKALVTRLVKTKT-----SSTTLAIGDGANDVGMLQEADIGVGISGVEG--MQAVMS--S-DIAIAQ 497 (793)
Q Consensus 439 P~--qK~~iv~~lk~~~-----~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~--~~a~~~--a-D~~i~~ 497 (793)
|. .|+..++.+.++. ...++++||+.||.+|++.|++||+|.+... ...+.. | +++...
T Consensus 172 ~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~ 242 (256)
T TIGR01486 172 GAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPA 242 (256)
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCC
Confidence 33 6887777776653 4679999999999999999999999977652 236665 4 476543
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.3e-07 Score=98.85 Aligned_cols=62 Identities=23% Similarity=0.344 Sum_probs=49.9
Q ss_pred EcCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 435 CRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 435 ~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
....|. .|+..++.+.+..+ ..++++||+.||++|++.|+.|++|.+.. ..++..||+++.+
T Consensus 180 leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~-~~~k~~a~~~~~~ 246 (256)
T TIGR00099 180 IEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNAD-EELKALADYVTDS 246 (256)
T ss_pred EEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCch-HHHHHhCCEEecC
Confidence 344554 59999988877544 67999999999999999999999996543 3478899998865
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.2e-06 Score=89.31 Aligned_cols=289 Identities=13% Similarity=0.182 Sum_probs=171.4
Q ss_pred hcCceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCc-ccccchhhh
Q 003824 290 EKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPE-SKTLEKSED 368 (793)
Q Consensus 290 e~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~-~~~~~~~~~ 368 (793)
-++-.|.|++...-+.+.+....|+.|-++-|+.+..+-.+.....-.|.++||-..+..-+.+..+... ..+......
T Consensus 812 ~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~ 891 (1354)
T KOG4383|consen 812 FSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHE 891 (1354)
T ss_pred hccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCCh
Confidence 3678899999999999999999999999999999999999999999999999998877665555443211 111111111
Q ss_pred HHHHHHHHHHHHHHHHhhhhhc---cccccCCCCCeEE-EEeCchhhHhhhh-----------hHHHHHHHHHh-cCCee
Q 003824 369 KSAAAAALKASVLHQLIRGKEL---LDSSNESLGPLAL-IIDGKSLTYALED-----------DVKDLFLELAI-GCASV 432 (793)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l-vi~G~~l~~~~~~-----------~~~~~~~~l~~-~~~~v 432 (793)
.-..++....+.+.|+.....+ +..+........+ -++. ......++ ..+.|+.++.- .-=+-
T Consensus 892 q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ds-di~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~ 970 (1354)
T KOG4383|consen 892 QFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDS-DIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVG 970 (1354)
T ss_pred hhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccccc-chhhhcCCCchhhcCcchhhcCcccccccCcceeee
Confidence 1111111222222222111100 0000000000000 0000 00000000 11222222110 00123
Q ss_pred EEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccC--hhhhhhcceeEEeccCCccc----------------c-------
Q 003824 433 ICCRSSPKQKALVTRLVKTKTSSTTLAIGDGAND--VGMLQEADIGVGISGVEGMQ----------------A------- 487 (793)
Q Consensus 433 i~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND--~~ml~~AdvGI~i~g~~~~~----------------a------- 487 (793)
.|.+++|+.--++++.+|+ .|++|+..|..+|- ....-+||++|++..-+... |
T Consensus 971 LFTDcnpeamcEMIeIMQE-~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglspl 1049 (1354)
T KOG4383|consen 971 LFTDCNPEAMCEMIEIMQE-NGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPL 1049 (1354)
T ss_pred eccCCCHHHHHHHHHHHHH-cCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCce
Confidence 6889999999999999999 89999999999884 44567899999875532221 0
Q ss_pred -------cccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHHHHH
Q 003824 488 -------VMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYN 558 (793)
Q Consensus 488 -------~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n 558 (793)
..+.|+.+.+-+. +.+| ++..|....-+++.++|.++..+.++.++|+--++. -.++|+--+++|..
T Consensus 1050 QiSgqLnaL~c~~~f~~ee~ikiirL-Ie~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~---LP~i~s~sdii~lS 1125 (1354)
T KOG4383|consen 1050 QISGQLNALACDFRFDHEELIKIIRL-IECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFF---LPIIFSHSDIILLS 1125 (1354)
T ss_pred eecccccccccccchhHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---ccchhccchHHHHH
Confidence 1122332222222 4445 778888889999999999999999888888765553 33457777778877
Q ss_pred Hhhccccceeee-cccCCCChHH-hhhcch
Q 003824 559 VFFTSLPVIALG-VFDQDVSARF-CLKFPL 586 (793)
Q Consensus 559 ~~~~~lp~l~l~-~~~~~~~~~~-~~~~P~ 586 (793)
.+- +|.+.+| ++.+..+... ++..|+
T Consensus 1126 cfc--~PlL~i~tL~gk~~hkSii~maagK 1153 (1354)
T KOG4383|consen 1126 CFC--IPLLFIGTLFGKFEHKSIIIMAAGK 1153 (1354)
T ss_pred HHH--HHHHHHHHHhcCCCccceEEeeccC
Confidence 665 6777777 5554444333 333443
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.8e-07 Score=92.90 Aligned_cols=123 Identities=22% Similarity=0.281 Sum_probs=85.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++++.++.|++.|+++.++||.....+..+...+|+..--...+..++.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~--------------------------- 137 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDG--------------------------- 137 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECC---------------------------
Confidence 58999999999999999999999999999999999988874311110000000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEc-CChhhHHHHHHHHHhcCC---CeEEE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTKTS---STTLA 459 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r-~sP~qK~~iv~~lk~~~~---~~vla 459 (793)
.++|. +..+ ..+..|..+++.+.+..+ ..+++
T Consensus 138 --------------------~~~~~------------------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~ 173 (219)
T TIGR00338 138 --------------------KLTGL------------------------VEGPIVDASYKGKTLLILLRKEGISPENTVA 173 (219)
T ss_pred --------------------EEEEE------------------------ecCcccCCcccHHHHHHHHHHcCCCHHHEEE
Confidence 01110 1111 112335666665544333 46899
Q ss_pred EcCCccChhhhhhcceeEEeccCCcccccccCCeeecchh
Q 003824 460 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 499 (793)
Q Consensus 460 iGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~ 499 (793)
|||+.+|+.|.+.|+++|++.+.+. ..++||+++.+.+
T Consensus 174 iGDs~~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~ 211 (219)
T TIGR00338 174 VGDGANDLSMIKAAGLGIAFNAKPK--LQQKADICINKKD 211 (219)
T ss_pred EECCHHHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCC
Confidence 9999999999999999999976654 6789999998754
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.1e-06 Score=81.95 Aligned_cols=96 Identities=16% Similarity=0.213 Sum_probs=71.5
Q ss_pred HHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhcc
Q 003824 312 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 391 (793)
Q Consensus 312 ~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (793)
+|+.|++.|+++.|+||+....+..+.+..|+...
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------------------- 70 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------------------- 70 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------------------------
Confidence 89999999999999999999999999988886320
Q ss_pred ccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc---CCCeEEEEcCCccChh
Q 003824 392 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDVG 468 (793)
Q Consensus 392 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~ND~~ 468 (793)
+++ . ..|...++.+.+. ....++++||+.||++
T Consensus 71 -------------~~~-----------------------------~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~ 106 (154)
T TIGR01670 71 -------------YQG-----------------------------Q--SNKLIAFSDILEKLALAPENVAYIGDDLIDWP 106 (154)
T ss_pred -------------Eec-----------------------------c--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 000 0 1233333333222 2367999999999999
Q ss_pred hhhhcceeEEeccCCcccccccCCeeecc
Q 003824 469 MLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 469 ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
|++.|++++++.+.... .+..||+++..
T Consensus 107 ~~~~ag~~~~v~~~~~~-~~~~a~~i~~~ 134 (154)
T TIGR01670 107 VMEKVGLSVAVADAHPL-LIPRADYVTRI 134 (154)
T ss_pred HHHHCCCeEecCCcCHH-HHHhCCEEecC
Confidence 99999999999665443 67788998864
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.4e-06 Score=84.00 Aligned_cols=100 Identities=14% Similarity=0.199 Sum_probs=72.9
Q ss_pred HHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhc
Q 003824 311 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 390 (793)
Q Consensus 311 ~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (793)
..|+.|+++|+++.|+|+.+...+..+...+|+..- +
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~----f--------------------------------------- 77 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF----H--------------------------------------- 77 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE----E---------------------------------------
Confidence 689999999999999999999999999999987420 0
Q ss_pred cccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhh
Q 003824 391 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 470 (793)
Q Consensus 391 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml 470 (793)
++ + .-.|+--..+++.+.- ....+++|||+.||++|+
T Consensus 78 ---------------~~-------------------------~--kpkp~~~~~~~~~l~~-~~~ev~~iGD~~nDi~~~ 114 (169)
T TIGR02726 78 ---------------EG-------------------------I--KKKTEPYAQMLEEMNI-SDAEVCYVGDDLVDLSMM 114 (169)
T ss_pred ---------------ec-------------------------C--CCCHHHHHHHHHHcCc-CHHHEEEECCCHHHHHHH
Confidence 00 0 0112211222222221 236799999999999999
Q ss_pred hhcceeEEeccCCcccccccCCeeecc
Q 003824 471 QEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 471 ~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
+.|+++++|.+... .++..|+++...
T Consensus 115 ~~ag~~~am~nA~~-~lk~~A~~I~~~ 140 (169)
T TIGR02726 115 KRVGLAVAVGDAVA-DVKEAAAYVTTA 140 (169)
T ss_pred HHCCCeEECcCchH-HHHHhCCEEcCC
Confidence 99999999976654 378999998763
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.5e-06 Score=88.89 Aligned_cols=50 Identities=14% Similarity=0.061 Sum_probs=41.1
Q ss_pred CceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 292 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 292 ~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
|.||+.- ...+.+++.++|+.|++.|++++++||+....+..+.+++|+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 4455531 2346677999999999999999999999999999999999874
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.5e-06 Score=88.53 Aligned_cols=52 Identities=8% Similarity=0.089 Sum_probs=42.0
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc----cccCceEEEE
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVII 353 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi----~~~~~~~~~i 353 (793)
.+..-+++.++|++|+++|++++++||+....+..+..++|+ +..|+..+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~ 68 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFI 68 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEe
Confidence 345566799999999999999999999999999999999986 3344444443
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.34 E-value=9.5e-07 Score=83.26 Aligned_cols=111 Identities=19% Similarity=0.320 Sum_probs=78.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCce--EEEEccCCCcccccchhhhHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMR--QVIISSETPESKTLEKSEDKSAAAAALKASVL 381 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (793)
.+-||++|....|++.|.++.++||--..-+..+|.++||-..+.. .+.++....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk----------------------- 144 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK----------------------- 144 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc-----------------------
Confidence 3679999999999999999999999999999999999999653211 111111000
Q ss_pred HHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc-CCCeEEEE
Q 003824 382 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK-TSSTTLAI 460 (793)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~-~~~~vlai 460 (793)
...++.. -.-+...-|+.+++.+++. +-+.++||
T Consensus 145 ----------------------~~gfd~~-----------------------~ptsdsggKa~~i~~lrk~~~~~~~~mv 179 (227)
T KOG1615|consen 145 ----------------------YLGFDTN-----------------------EPTSDSGGKAEVIALLRKNYNYKTIVMV 179 (227)
T ss_pred ----------------------ccccccC-----------------------CccccCCccHHHHHHHHhCCChheeEEe
Confidence 0000000 0112234689999999874 34789999
Q ss_pred cCCccChhhhhhcceeEEeccC
Q 003824 461 GDGANDVGMLQEADIGVGISGV 482 (793)
Q Consensus 461 GDG~ND~~ml~~AdvGI~i~g~ 482 (793)
|||+||.+|+..||.=||..|.
T Consensus 180 GDGatDlea~~pa~afi~~~g~ 201 (227)
T KOG1615|consen 180 GDGATDLEAMPPADAFIGFGGN 201 (227)
T ss_pred cCCccccccCCchhhhhccCCc
Confidence 9999999999998877766554
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.7e-06 Score=87.68 Aligned_cols=56 Identities=23% Similarity=0.262 Sum_probs=45.4
Q ss_pred cCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCC
Q 003824 436 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD 492 (793)
Q Consensus 436 r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD 492 (793)
...|. .|...++.+.++.+ ..++++||+.||.+|++.|+.||+|.+.... .+..||
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~-~k~~a~ 212 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPE-LEGLRH 212 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHH-HHHhhc
Confidence 34554 79999998877554 4689999999999999999999999765444 788888
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=6.6e-06 Score=82.76 Aligned_cols=126 Identities=20% Similarity=0.186 Sum_probs=86.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.||++++++.|+++ +++.++||-....+..+...+|+..--...+....+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-------------------------- 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC--------------------------
Confidence 3689999999999999 9999999999999999998888742111111111000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
.+.|. . -..|..|...++.++. .+..+++||||
T Consensus 121 --------------------~i~~~------------------------~--~~~p~~k~~~l~~~~~-~~~~~v~iGDs 153 (205)
T PRK13582 121 --------------------MITGY------------------------D--LRQPDGKRQAVKALKS-LGYRVIAAGDS 153 (205)
T ss_pred --------------------eEECc------------------------c--ccccchHHHHHHHHHH-hCCeEEEEeCC
Confidence 01110 0 0136677778887776 67889999999
Q ss_pred ccChhhhhhcceeEEeccCCcccccccCCe-eecchhhHHHH
Q 003824 464 ANDVGMLQEADIGVGISGVEGMQAVMSSDI-AIAQFRFLERL 504 (793)
Q Consensus 464 ~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~-~i~~f~~l~~l 504 (793)
.||++|.++|++|+.....+.. ....+++ ++.++..+..+
T Consensus 154 ~~D~~~~~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 154 YNDTTMLGEADAGILFRPPANV-IAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred HHHHHHHHhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHH
Confidence 9999999999999987544332 2234554 67777766554
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.22 E-value=6.1e-06 Score=82.66 Aligned_cols=118 Identities=19% Similarity=0.237 Sum_probs=79.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.++++.|++.|+++.++||-....+..++..+|+..--...+..+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-------------------------- 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-------------------------- 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC--------------------------
Confidence 589999999999999999999999999999999999988632110111111000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcC---CCeEEEE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLAI 460 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~---~~~vlai 460 (793)
...+ . .+....|..|..+++.+.+.. ...+++|
T Consensus 134 --------------------~~~p----------------------~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~i 169 (201)
T TIGR01491 134 --------------------FIQP----------------------D--GIVRVTFDNKGEAVERLKRELNPSLTETVAV 169 (201)
T ss_pred --------------------eEec----------------------c--eeeEEccccHHHHHHHHHHHhCCCHHHEEEE
Confidence 0000 0 111234556776666655433 3569999
Q ss_pred cCCccChhhhhhcceeEEeccCCcccccccCC
Q 003824 461 GDGANDVGMLQEADIGVGISGVEGMQAVMSSD 492 (793)
Q Consensus 461 GDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD 492 (793)
||+.||++|++.|++++++.+... ....++|
T Consensus 170 GDs~~D~~~a~~ag~~~a~~~~~~-~~~~a~~ 200 (201)
T TIGR01491 170 GDSKNDLPMFEVADISISLGDEGH-ADYLAKD 200 (201)
T ss_pred cCCHhHHHHHHhcCCeEEECCCcc-chhhccc
Confidence 999999999999999999854332 2444544
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.21 E-value=9.5e-06 Score=82.71 Aligned_cols=37 Identities=19% Similarity=0.202 Sum_probs=34.3
Q ss_pred ChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 308 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 308 ~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
.+.++|+.|+++||+++++||+....+..+.+.+++.
T Consensus 20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3889999999999999999999999999999999863
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.4e-05 Score=82.32 Aligned_cols=40 Identities=10% Similarity=0.048 Sum_probs=36.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
..-+.+.++|++|+++||.+++.||+.......+.+++++
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl 57 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRL 57 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 4556789999999999999999999999999999999997
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.5e-06 Score=82.20 Aligned_cols=111 Identities=18% Similarity=0.189 Sum_probs=78.1
Q ss_pred HHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhc
Q 003824 311 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 390 (793)
Q Consensus 311 ~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (793)
.+|+.|++.|+++.++||+....+..+++.+|+..-
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~-------------------------------------------- 90 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL-------------------------------------------- 90 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee--------------------------------------------
Confidence 689999999999999999999999999999886310
Q ss_pred cccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC---CeEEEEcCCccCh
Q 003824 391 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIGDGANDV 467 (793)
Q Consensus 391 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vlaiGDG~ND~ 467 (793)
+. ..+.|...++.+.+..| ..|++|||+.||+
T Consensus 91 -------------------------------------------f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 91 -------------------------------------------YQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred -------------------------------------------ec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 00 01123333333322233 5799999999999
Q ss_pred hhhhhcceeEEeccCCcccccccCCeeec------chhhHHHHH-HHhhhh
Q 003824 468 GMLQEADIGVGISGVEGMQAVMSSDIAIA------QFRFLERLL-LVHGHW 511 (793)
Q Consensus 468 ~ml~~AdvGI~i~g~~~~~a~~~aD~~i~------~f~~l~~ll-l~~GR~ 511 (793)
+|++.|++++++...+ ..++..||+++. ..+.+..++ ...|+|
T Consensus 126 ~~a~~aG~~~~v~~~~-~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~ 175 (183)
T PRK09484 126 PVMEKVGLSVAVADAH-PLLLPRADYVTRIAGGRGAVREVCDLLLLAQGKL 175 (183)
T ss_pred HHHHHCCCeEecCChh-HHHHHhCCEEecCCCCCCHHHHHHHHHHHhcCCh
Confidence 9999999999875433 335678899986 355566553 344554
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.9e-05 Score=90.20 Aligned_cols=49 Identities=8% Similarity=0.049 Sum_probs=39.9
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc----cccCceEEEE
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVII 353 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi----~~~~~~~~~i 353 (793)
.-+.+.++|+.|+++||+++++||+....+..+++++++ +..|+..+..
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~ 486 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFI 486 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEE
Confidence 335679999999999999999999999999999999885 4445554443
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.3e-05 Score=83.37 Aligned_cols=177 Identities=12% Similarity=0.150 Sum_probs=92.6
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcccc------CceEEEEccCCCcccccchhhhHHHHHHH
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQ------GMRQVIISSETPESKTLEKSEDKSAAAAA 375 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 375 (793)
..+..+.+.++|+++++.||+++++||+....+..+.++.++..+ ++..+...+.. .........+...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~-----~~~~~~~~~~~~~ 93 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE-----VPDQHWAEYLSEK 93 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC-----cCCHHHHHHHhcc
Confidence 345778899999999999999999999999999999988887543 22222222100 0000001111100
Q ss_pred HHHHHHHHHhhhhhccccc---cCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEE----cCCh--hhHHHHH
Q 003824 376 LKASVLHQLIRGKELLDSS---NESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC----RSSP--KQKALVT 446 (793)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~----r~sP--~qK~~iv 446 (793)
........+......+... .....+..+..+.+.....+ ..+.+.+......+..+... .+.| ..|+..+
T Consensus 94 ~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al 172 (249)
T TIGR01485 94 WQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVI-KQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQAL 172 (249)
T ss_pred cCHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHH-HHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHH
Confidence 0000001111111111110 01112223322222111111 12222232211122221211 3444 3699888
Q ss_pred HHHHhcCC---CeEEEEcCCccChhhhhh-cceeEEeccCCc
Q 003824 447 RLVKTKTS---STTLAIGDGANDVGMLQE-ADIGVGISGVEG 484 (793)
Q Consensus 447 ~~lk~~~~---~~vlaiGDG~ND~~ml~~-AdvGI~i~g~~~ 484 (793)
+.+.+..+ ..|+++||+.||++|++. ++.||+|.+...
T Consensus 173 ~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~ 214 (249)
T TIGR01485 173 QYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQE 214 (249)
T ss_pred HHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCHH
Confidence 88877543 689999999999999998 679999976543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=5.8e-05 Score=78.99 Aligned_cols=184 Identities=13% Similarity=0.069 Sum_probs=95.7
Q ss_pred ccCCChHHHHHHHHH-cCCeEEEEeCCchhhHHHHHHHcC--ccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQ-AGIKLWVLTGDKMETAINIGFACS--LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 380 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~-agIkv~mlTGD~~~ta~~ia~~~g--i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (793)
.+-+++.++|+.|++ .|++++++||+....+..+....+ ++..++..+.-.........+... ..+.+
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~---------~~~~i 106 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDA---------IARDI 106 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChh---------HHHHH
Confidence 455788999999998 899999999999999988887665 333333332211111011111111 11111
Q ss_pred HHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCC------eeEEEcCChh--hHHHHHHHHHhc
Q 003824 381 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCA------SVICCRSSPK--QKALVTRLVKTK 452 (793)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~------~vi~~r~sP~--qK~~iv~~lk~~ 452 (793)
...+...........-......++........ -.+.+......+..... ..-+..+.|. .|+..++.+.+.
T Consensus 107 ~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~ 185 (266)
T PRK10187 107 SVQLHTALAQLPGAELEAKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQE 185 (266)
T ss_pred HHHHHHHhccCCCcEEEeCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHh
Confidence 11111100000000000112222332221110 01111112222222221 1122333443 799888876654
Q ss_pred CC---CeEEEEcCCccChhhhhhc----ceeEEeccCCcccccccCCeeecchhhHH
Q 003824 453 TS---STTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDIAIAQFRFLE 502 (793)
Q Consensus 453 ~~---~~vlaiGDG~ND~~ml~~A----dvGI~i~g~~~~~a~~~aD~~i~~f~~l~ 502 (793)
.+ ..++++||+.||.+|++.+ +.||+|++. ...|++.+.+-..+.
T Consensus 186 ~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a-----~~~A~~~l~~~~~v~ 237 (266)
T PRK10187 186 APFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG-----ATQASWRLAGVPDVW 237 (266)
T ss_pred cCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC-----CCcCeEeCCCHHHHH
Confidence 43 6799999999999999999 899999543 346888888755433
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.13 E-value=8.4e-06 Score=80.96 Aligned_cols=39 Identities=23% Similarity=0.232 Sum_probs=35.8
Q ss_pred CChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccc
Q 003824 307 NGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 345 (793)
Q Consensus 307 ~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~ 345 (793)
+++++.|+.++++|++++|+||.....+..+++.+|+..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~ 130 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD 130 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc
Confidence 666699999999999999999999999999999999854
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.03 E-value=3e-05 Score=77.91 Aligned_cols=172 Identities=16% Similarity=0.185 Sum_probs=87.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHc--CccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC--SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 381 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~--gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (793)
++.+.+.++|++|++.|++++++||+....+..+.... .++..++..+...+...... ........+... +.+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~--~~~~~~~~~~~~--~~~~ 92 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIE--PSDVFEEILGIK--EEIG 92 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEc--ccccHHHHHHhh--hhcC
Confidence 46788999999999999999999999999999888763 34555555544322111100 001111111000 0100
Q ss_pred HHHhhhhhccccc--cCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhc-CCeeE------EEcCCh--hhHHHHHHHHH
Q 003824 382 HQLIRGKELLDSS--NESLGPLALIIDGKSLTYALEDDVKDLFLELAIG-CASVI------CCRSSP--KQKALVTRLVK 450 (793)
Q Consensus 382 ~~~~~~~~~~~~~--~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~-~~~vi------~~r~sP--~qK~~iv~~lk 450 (793)
..+.......... ........+...+..........+.......... ....+ +..+.| ..|...++.+.
T Consensus 93 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~ 172 (204)
T TIGR01484 93 AELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALL 172 (204)
T ss_pred ceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHH
Confidence 0000000000000 0011122222222100001111222222221100 01111 223344 47998888887
Q ss_pred hcCC---CeEEEEcCCccChhhhhhcceeEEe
Q 003824 451 TKTS---STTLAIGDGANDVGMLQEADIGVGI 479 (793)
Q Consensus 451 ~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i 479 (793)
++.+ ..++++||+.||.+|++.|++||+|
T Consensus 173 ~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 173 KELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 6544 5699999999999999999999986
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.01 E-value=3.4e-05 Score=78.76 Aligned_cols=41 Identities=20% Similarity=0.428 Sum_probs=38.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.|+++++++.|++.|+++.++||.....+..++..+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999999999998884
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.5e-05 Score=78.10 Aligned_cols=140 Identities=14% Similarity=0.184 Sum_probs=85.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
-+++||+.+.++.|++.|+++.|+||.....+..+....+... .+. ...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~--~n~-------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIY--CNE-------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEE--ece--------------------------
Confidence 4699999999999999999999999999888888887654321 110 000
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcC
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 462 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 462 (793)
+.++|..+..... . .+. .-+.......|..+++.++. ....+++|||
T Consensus 118 --------------------~~~~~~~~~~~~p-~----------~~~-~~~~~~cg~~K~~~l~~~~~-~~~~~i~iGD 164 (214)
T TIGR03333 118 --------------------ADFSNEYIHIDWP-H----------PCD-GTCQNQCGCCKPSLIRKLSE-PNDYHIVIGD 164 (214)
T ss_pred --------------------eEeeCCeeEEeCC-C----------CCc-cccccCCCCCHHHHHHHHhh-cCCcEEEEeC
Confidence 0111111110000 0 000 00011113579999998876 5677899999
Q ss_pred CccChhhhhhcceeEEeccC-CcccccccCCeeecchhhHHHHHH
Q 003824 463 GANDVGMLQEADIGVGISGV-EGMQAVMSSDIAIAQFRFLERLLL 506 (793)
Q Consensus 463 G~ND~~ml~~AdvGI~i~g~-~~~~a~~~aD~~i~~f~~l~~lll 506 (793)
|.||..|.+.||++++-..- +..+-...+.+.+.+|..+...|-
T Consensus 165 g~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 165 SVTDVEAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred CHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 99999999999998765311 111112234555666777666643
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00083 Score=75.81 Aligned_cols=40 Identities=20% Similarity=0.156 Sum_probs=37.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
|+++++.+.++.++++|++++++|+-....+..+++..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl 111 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL 111 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999999999987
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.96 E-value=4.8e-05 Score=84.51 Aligned_cols=174 Identities=13% Similarity=0.087 Sum_probs=89.6
Q ss_pred hHHHH-HHHHHcCCeEEEEeCCchhhHHHHHHHcCccccC------ceEEEEccCCCcccccchhhhHHHHHHHHHHHHH
Q 003824 309 VPECI-DKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG------MRQVIISSETPESKTLEKSEDKSAAAAALKASVL 381 (793)
Q Consensus 309 v~~~I-~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (793)
..+++ +++++.|+.++++||+....+..+.++.++..+. +..+....... ....-...+.........
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~-----~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMV-----PDHGWVEYLNKKWDREIV 107 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCc-----cChhHHHHHhccCChhhH
Confidence 33444 8889999999999999999999999999887654 22222211110 011111111111111111
Q ss_pred HHHhhhhhccc--ccc-CCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCee----EEEcCChh--hHHHHHHHHHhc
Q 003824 382 HQLIRGKELLD--SSN-ESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV----ICCRSSPK--QKALVTRLVKTK 452 (793)
Q Consensus 382 ~~~~~~~~~~~--~~~-~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~v----i~~r~sP~--qK~~iv~~lk~~ 452 (793)
.........+. ... ....+..+..+.+..... .+.+.+.+......++.+ -+..+.|. .|+..++.+.++
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~-~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~ 186 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEV-IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKK 186 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHH-HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHH
Confidence 11000000010 100 111222333332222211 122333332211111111 23455555 599999888775
Q ss_pred C---C---CeEEEEcCCccChhhhhhcc-eeEEeccCCcccccc
Q 003824 453 T---S---STTLAIGDGANDVGMLQEAD-IGVGISGVEGMQAVM 489 (793)
Q Consensus 453 ~---~---~~vlaiGDG~ND~~ml~~Ad-vGI~i~g~~~~~a~~ 489 (793)
. | ..|+++||+.||.+||+.|+ .||+|++.... .+.
T Consensus 187 ~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~e-lk~ 229 (413)
T PLN02382 187 LKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEE-LLQ 229 (413)
T ss_pred hhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHH-HHH
Confidence 4 3 58999999999999999999 69999665443 444
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=2.6e-05 Score=80.86 Aligned_cols=48 Identities=25% Similarity=0.390 Sum_probs=38.0
Q ss_pred cCChh--hHHHHHHHHHhcCCCeEEEEcC----CccChhhhhhc-ceeEEeccCCc
Q 003824 436 RSSPK--QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEA-DIGVGISGVEG 484 (793)
Q Consensus 436 r~sP~--qK~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~A-dvGI~i~g~~~ 484 (793)
.+.|. .|+.-++.+.++ .+.|++||| |.||.+||+.| -.|+++.+.+.
T Consensus 181 eI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~ 235 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPED 235 (247)
T ss_pred EeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHH
Confidence 44443 799999999884 689999999 99999999976 56777765544
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.88 E-value=4.6e-05 Score=76.43 Aligned_cols=112 Identities=12% Similarity=0.023 Sum_probs=77.0
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHH
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 381 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (793)
..++.+++.+.|+.+++.|++++++||-....+..+++.+|+..--...+....+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g------------------------ 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDG------------------------ 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCC------------------------
Confidence 45689999999999999999999999999999999999998732100000000000
Q ss_pred HHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC---CeEE
Q 003824 382 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTL 458 (793)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vl 458 (793)
..+|+.. .-.+.++.|...++.+.+..+ ..++
T Consensus 141 ----------------------~~~g~~~-----------------------~~~~~g~~K~~~l~~~~~~~~~~~~~~~ 175 (202)
T TIGR01490 141 ----------------------IYTGNID-----------------------GNNCKGEGKVHALAELLAEEQIDLKDSY 175 (202)
T ss_pred ----------------------EEeCCcc-----------------------CCCCCChHHHHHHHHHHHHcCCCHHHcE
Confidence 1222211 012345677766665543233 4789
Q ss_pred EEcCCccChhhhhhcceeEEeccC
Q 003824 459 AIGDGANDVGMLQEADIGVGISGV 482 (793)
Q Consensus 459 aiGDG~ND~~ml~~AdvGI~i~g~ 482 (793)
++||+.+|.+|++.|+.++.+...
T Consensus 176 ~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 176 AYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred eeeCCcccHHHHHhCCCcEEeCCC
Confidence 999999999999999999988543
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.87 E-value=5e-05 Score=74.32 Aligned_cols=40 Identities=20% Similarity=0.165 Sum_probs=37.4
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
+++++.+.++.+++.|++++++||.....+..++...|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 6799999999999999999999999999999999988874
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00012 Score=72.27 Aligned_cols=42 Identities=14% Similarity=0.078 Sum_probs=38.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 478999999999999999999999999999999888888874
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.73 E-value=9.2e-05 Score=68.42 Aligned_cols=117 Identities=20% Similarity=0.213 Sum_probs=76.9
Q ss_pred eecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHH
Q 003824 301 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 380 (793)
Q Consensus 301 ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (793)
-..++.+++++.++.|++.|++++++||.....+......+|+......++........ .
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~------------------ 80 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY--Y------------------ 80 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh--c------------------
Confidence 34588999999999999999999999999999999999998873221111110000000 0
Q ss_pred HHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEE
Q 003824 381 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAI 460 (793)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlai 460 (793)
.. ..... ....+++.+-.|..+..+.+.+.. ....++++
T Consensus 81 ------------------~~-~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i 119 (139)
T cd01427 81 ------------------PK-EGLFL---------------------GGGPFDIGKPNPDKLLAALKLLGV-DPEEVLMV 119 (139)
T ss_pred ------------------cc-ccccc---------------------cccccccCCCCHHHHHHHHHHcCC-ChhhEEEe
Confidence 00 00000 112235556667777777777654 46789999
Q ss_pred cCCccChhhhhh-cceeEE
Q 003824 461 GDGANDVGMLQE-ADIGVG 478 (793)
Q Consensus 461 GDG~ND~~ml~~-AdvGI~ 478 (793)
||+.+|+.|.+. ..-+|+
T Consensus 120 gD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 120 GDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCCHHHHHHHHHcCCceee
Confidence 999999999998 444443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0002 Score=72.89 Aligned_cols=136 Identities=14% Similarity=0.144 Sum_probs=81.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
+++||+.+.++.|++.|+++.|+||-....+..+.... +.. ..++....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~---------------------------- 122 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGS---------------------------- 122 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEE----------------------------
Confidence 68999999999999999999999999988888888776 422 11110000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEE-cCChhhHHHHHHHHHhcCCCeEEEEcC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC-RSSPKQKALVTRLVKTKTSSTTLAIGD 462 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~-r~sP~qK~~iv~~lk~~~~~~vlaiGD 462 (793)
.++|..+..... + ....-| ......|..+++.++. ....+++|||
T Consensus 123 --------------------~~~~~~~~~~kp-~------------p~~~~~~~~~~~~K~~~l~~~~~-~~~~~i~iGD 168 (219)
T PRK09552 123 --------------------DFSGEYITITWP-H------------PCDEHCQNHCGCCKPSLIRKLSD-TNDFHIVIGD 168 (219)
T ss_pred --------------------EecCCeeEEecc-C------------CccccccccCCCchHHHHHHhcc-CCCCEEEEeC
Confidence 111111100000 0 000000 0001237778887765 5568999999
Q ss_pred CccChhhhhhcceeEEeccC-CcccccccCCeeecchhhHHHH
Q 003824 463 GANDVGMLQEADIGVGISGV-EGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 463 G~ND~~ml~~AdvGI~i~g~-~~~~a~~~aD~~i~~f~~l~~l 504 (793)
|.||+.|.+.||+.++...- +.......+.+.+.+|..+...
T Consensus 169 s~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~ 211 (219)
T PRK09552 169 SITDLEAAKQADKVFARDFLITKCEELGIPYTPFETFHDVQTE 211 (219)
T ss_pred CHHHHHHHHHCCcceeHHHHHHHHHHcCCCccccCCHHHHHHH
Confidence 99999999999997773210 1101123355666667666554
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00011 Score=67.32 Aligned_cols=110 Identities=15% Similarity=0.226 Sum_probs=78.8
Q ss_pred HHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhc
Q 003824 311 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 390 (793)
Q Consensus 311 ~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (793)
-.|+.|.++||++-++||++...+..=|+++||-.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 57999999999999999999999999999999731
Q ss_pred cccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC---CeEEEEcCCccCh
Q 003824 391 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIGDGANDV 467 (793)
Q Consensus 391 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vlaiGDG~ND~ 467 (793)
+.-| .++|....+.+.+..+ +.|+.+||-.||.
T Consensus 77 -------------~~qG-------------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 77 -------------LYQG-------------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred -------------eeec-------------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 0111 1334434443333233 6799999999999
Q ss_pred hhhhhcceeEEeccCCcccccccCCeeecc------hhhHHHHHHHhhhh
Q 003824 468 GMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHW 511 (793)
Q Consensus 468 ~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~------f~~l~~lll~~GR~ 511 (793)
|+|+..+.+++..+.... .++.||+++.. .+....+ +..++.
T Consensus 113 pvm~~vGls~a~~dAh~~-v~~~a~~Vt~~~GG~GAvREv~dl-il~aq~ 160 (170)
T COG1778 113 PVMEKVGLSVAVADAHPL-LKQRADYVTSKKGGEGAVREVCDL-ILQAQG 160 (170)
T ss_pred HHHHHcCCcccccccCHH-HHHhhHhhhhccCcchHHHHHHHH-HHHccC
Confidence 999999999988655443 67889998874 5555555 333333
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00075 Score=81.14 Aligned_cols=187 Identities=14% Similarity=0.103 Sum_probs=97.0
Q ss_pred cCCChHHHHHHHHH-cCCeEEEEeCCchhhHHHHHHHcC--ccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHH
Q 003824 305 LQNGVPECIDKLAQ-AGIKLWVLTGDKMETAINIGFACS--LLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 381 (793)
Q Consensus 305 lr~~v~~~I~~L~~-agIkv~mlTGD~~~ta~~ia~~~g--i~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (793)
+-+++.++|+.|.+ .|+.|+++||+............+ ++..++..+...+..-.........-...+..... ...
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~-~~~ 593 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILE-EFV 593 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHH-HHH
Confidence 56788899999999 699999999999988887765444 45555544432221100000000000111111111 000
Q ss_pred HHHhhhhhccccccCCCCCeEEEEeCch----hhHhhhhhHHHHHHHHHhcCCeeEE-----EcCCh--hhHHHHHHHHH
Q 003824 382 HQLIRGKELLDSSNESLGPLALIIDGKS----LTYALEDDVKDLFLELAIGCASVIC-----CRSSP--KQKALVTRLVK 450 (793)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~----l~~~~~~~~~~~~~~l~~~~~~vi~-----~r~sP--~qK~~iv~~lk 450 (793)
.+. ....+. .....+...-.. +.....+++..++..+.......+. ..+.| -.|+..++.+.
T Consensus 594 ~~~--~gs~ie-----~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll 666 (726)
T PRK14501 594 DRT--PGSFIE-----EKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLL 666 (726)
T ss_pred hcC--CCcEEE-----EcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHH
Confidence 000 000000 111222222111 1111112233333333222111121 23334 37999998887
Q ss_pred hcC-CCeEEEEcCCccChhhhhhc---ceeEEeccCCcccccccCCeeecchhhHHHH
Q 003824 451 TKT-SSTTLAIGDGANDVGMLQEA---DIGVGISGVEGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 451 ~~~-~~~vlaiGDG~ND~~ml~~A---dvGI~i~g~~~~~a~~~aD~~i~~f~~l~~l 504 (793)
+.. ...++++||+.||.+|++.+ ..+|++++ +..+|++.+.+-..+..+
T Consensus 667 ~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-----~~s~A~~~l~~~~eV~~~ 719 (726)
T PRK14501 667 EAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP-----GESRARYRLPSQREVREL 719 (726)
T ss_pred hcCCCCEEEEECCCCChHHHHHhcccCceEEEECC-----CCCcceEeCCCHHHHHHH
Confidence 632 36899999999999999997 46777743 346899999875554443
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0004 Score=70.86 Aligned_cols=42 Identities=26% Similarity=0.249 Sum_probs=38.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
-++.||+.+.++.|++.|+++.++||.....+..+.+..|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 468899999999999999999999999999888888888873
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00066 Score=69.06 Aligned_cols=126 Identities=24% Similarity=0.208 Sum_probs=84.4
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHH
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 381 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (793)
+.++-+++++++..|+++|++..++|++....+..+.+..|+...-..++
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~------------------------------ 136 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIV------------------------------ 136 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEE------------------------------
Confidence 55788999999999999999999999999999999999988753211110
Q ss_pred HHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEc
Q 003824 382 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 461 (793)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 461 (793)
.+... -...-.|.....+.+.+.. ..+.++|||
T Consensus 137 ------------------------g~~~~----------------------~~~KP~P~~l~~~~~~~~~-~~~~~l~VG 169 (220)
T COG0546 137 ------------------------GGDDV----------------------PPPKPDPEPLLLLLEKLGL-DPEEALMVG 169 (220)
T ss_pred ------------------------cCCCC----------------------CCCCcCHHHHHHHHHHhCC-ChhheEEEC
Confidence 00000 0011123333334443332 224799999
Q ss_pred CCccChhhhhhcc---eeEEeccC-CcccccccCCeeecchhhHHHH
Q 003824 462 DGANDVGMLQEAD---IGVGISGV-EGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 462 DG~ND~~ml~~Ad---vGI~i~g~-~~~~a~~~aD~~i~~f~~l~~l 504 (793)
|..+|+.|=++|+ |||.-+.. ...-....+|+++.+...|...
T Consensus 170 Ds~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 170 DSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred CCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHH
Confidence 9999999999999 44433222 2222456699999998877655
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00055 Score=68.82 Aligned_cols=41 Identities=29% Similarity=0.340 Sum_probs=36.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+|+.++++.|+++|+++.++||.....+..+....|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 68899999999999999999999999888888777777763
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0015 Score=68.74 Aligned_cols=41 Identities=12% Similarity=0.175 Sum_probs=35.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
.++.+++.++++.|++.|+++.++||-....+..+....|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 46889999999999999999999999988877777766665
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0014 Score=66.20 Aligned_cols=41 Identities=20% Similarity=0.188 Sum_probs=37.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+|+.++++.|++.|+++.++|+.....+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 58899999999999999999999999888888888888874
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0099 Score=61.47 Aligned_cols=66 Identities=11% Similarity=0.097 Sum_probs=48.8
Q ss_pred cCChhhHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhc--------ceeEEeccCCcccccccCCeeecchhhHHHH
Q 003824 436 RSSPKQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEA--------DIGVGISGVEGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 436 r~sP~qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~A--------dvGI~i~g~~~~~a~~~aD~~i~~f~~l~~l 504 (793)
+..+-+|+..++.+.+..+ ..++++||+.||..|++.+ ..||.+. .+. .+..|++++.+...+..+
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~--~g~-~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG--SGS-KKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe--cCC-cCCCceEeCCCHHHHHHH
Confidence 3445579988887766433 5799999999999999999 4677664 222 456799999987766555
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0025 Score=65.20 Aligned_cols=40 Identities=23% Similarity=0.126 Sum_probs=35.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.||+.+.++.|++.|+++.++|+.+...+..+-...|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l 134 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGW 134 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCc
Confidence 5789999999999999999999999988777777666665
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0021 Score=66.39 Aligned_cols=42 Identities=19% Similarity=0.375 Sum_probs=35.3
Q ss_pred hHHHHHHHHHhcCCCeEEEEcC----CccChhhhhh-cceeEEeccCCc
Q 003824 441 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQE-ADIGVGISGVEG 484 (793)
Q Consensus 441 qK~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~-AdvGI~i~g~~~ 484 (793)
.|+.-++.++ ....|+|+|| |.||.+||+. -=.|+.+++-+.
T Consensus 189 nKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 189 DKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 6999999998 5788999999 8999999997 556888876543
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0025 Score=64.44 Aligned_cols=41 Identities=22% Similarity=0.058 Sum_probs=36.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+|+.++++.|+++|+++.++||.....+..+....|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 37899999999999999999999999988888888888764
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0036 Score=64.77 Aligned_cols=165 Identities=17% Similarity=0.201 Sum_probs=81.2
Q ss_pred HHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccc---c-chhhhHHHHHHHHHHHHHHHHhhhhhcc
Q 003824 316 LAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT---L-EKSEDKSAAAAALKASVLHQLIRGKELL 391 (793)
Q Consensus 316 L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (793)
..+.++.++++||++.+.+..+.++.++..++ .++.+... +... . ....-.+.+..........++-.....+
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd--~~I~svGt-~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l 107 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPD--YIITSVGT-EIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGL 107 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-S--EEEETTTT-EEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCE
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCC--EEEecCCe-EEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCc
Confidence 44788999999999999999999999885432 11111111 1110 0 1111112222111111111111111111
Q ss_pred cc---ccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeE----EEcCCh--hhHHHHHHHHHhcCC---CeEEE
Q 003824 392 DS---SNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVI----CCRSSP--KQKALVTRLVKTKTS---STTLA 459 (793)
Q Consensus 392 ~~---~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi----~~r~sP--~qK~~iv~~lk~~~~---~~vla 459 (793)
.. ......+....++.......+ +++...+......++.+. +..+-| ..|...|+.++++.+ ..|++
T Consensus 108 ~~q~~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~ 186 (247)
T PF05116_consen 108 RPQPESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLV 186 (247)
T ss_dssp EEGGCCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEE
T ss_pred ccCCccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEE
Confidence 11 111233455555554433222 233333332222222110 122333 369999999998643 57889
Q ss_pred EcCCccChhhhhhcceeEEeccCCc
Q 003824 460 IGDGANDVGMLQEADIGVGISGVEG 484 (793)
Q Consensus 460 iGDG~ND~~ml~~AdvGI~i~g~~~ 484 (793)
+||+.||.+||..++-||.+.+...
T Consensus 187 aGDSgND~~mL~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 187 AGDSGNDLEMLEGGDHGVVVGNAQP 211 (247)
T ss_dssp EESSGGGHHHHCCSSEEEE-TTS-H
T ss_pred EeCCCCcHHHHcCcCCEEEEcCCCH
Confidence 9999999999999999998876554
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.011 Score=59.74 Aligned_cols=111 Identities=14% Similarity=0.083 Sum_probs=75.1
Q ss_pred ccCCChHHHH-HHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECI-DKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 304 ~lr~~v~~~I-~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
.+.|++.++| +.+++.|++++++|+-....+..++...|+.. ...++...-+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~-------------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQ-------------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEE--------------------------
Confidence 4589999999 57889999999999999999999999988622 1112111100
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcC
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 462 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 462 (793)
...+|. +....+..+.|..-++..-........+-||
T Consensus 148 --------------------~~~tg~-----------------------~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~D 184 (211)
T PRK11590 148 --------------------RRYGGW-----------------------VLTLRCLGHEKVAQLERKIGTPLRLYSGYSD 184 (211)
T ss_pred --------------------EEEccE-----------------------ECCccCCChHHHHHHHHHhCCCcceEEEecC
Confidence 011121 1122355677876555321113455678999
Q ss_pred CccChhhhhhcceeEEeccCCc
Q 003824 463 GANDVGMLQEADIGVGISGVEG 484 (793)
Q Consensus 463 G~ND~~ml~~AdvGI~i~g~~~ 484 (793)
+.||.|||+.|+-++.+.....
T Consensus 185 s~~D~pmL~~a~~~~~vnp~~~ 206 (211)
T PRK11590 185 SKQDNPLLYFCQHRWRVTPRGE 206 (211)
T ss_pred CcccHHHHHhCCCCEEECccHH
Confidence 9999999999999999966543
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0047 Score=64.38 Aligned_cols=124 Identities=10% Similarity=0.134 Sum_probs=80.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+|+.++++.|++.|+++.++|+.....+..+-..+|+...-..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~---------------------------------- 154 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSV---------------------------------- 154 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcE----------------------------------
Confidence 5789999999999999999999999999888888888886432111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
++.+.... ...-.|+-=...++.+.- ....+++|||.
T Consensus 155 --------------------ii~~~d~~----------------------~~KP~Pe~~~~a~~~l~~-~p~~~l~IgDs 191 (260)
T PLN03243 155 --------------------VLAAEDVY----------------------RGKPDPEMFMYAAERLGF-IPERCIVFGNS 191 (260)
T ss_pred --------------------EEecccCC----------------------CCCCCHHHHHHHHHHhCC-ChHHeEEEcCC
Confidence 12111110 001111111122222221 33679999999
Q ss_pred ccChhhhhhcceeE-EeccCCcccccccCCeeecchhhHHHH
Q 003824 464 ANDVGMLQEADIGV-GISGVEGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 464 ~ND~~ml~~AdvGI-~i~g~~~~~a~~~aD~~i~~f~~l~~l 504 (793)
.+|+.+=+.|++-. ++.|.........+|+++.+++.+...
T Consensus 192 ~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 192 NSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred HHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHH
Confidence 99999999999854 565443322334579998888776544
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0052 Score=64.52 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=37.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.||+.++++.|++.|+++.++|+.....+..+-+..|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999999888888874
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0046 Score=62.27 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=73.7
Q ss_pred ccCCChHHHHH-HHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECID-KLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 304 ~lr~~v~~~I~-~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
.+.|++.++|+ .+++.|++++++|+=....+..+|+..++.... .++...-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57999999996 789899999999999999999999886654321 11111100
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcC
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 462 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 462 (793)
+.+|.. +..-.+..+.|..-++..-........+-||
T Consensus 147 ---------------------~~~gg~----------------------~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsD 183 (210)
T TIGR01545 147 ---------------------RGNGGW----------------------VLPLRCLGHEKVAQLEQKIGSPLKLYSGYSD 183 (210)
T ss_pred ---------------------EeCCce----------------------EcCccCCChHHHHHHHHHhCCChhheEEecC
Confidence 001100 0122345577766554321112345679999
Q ss_pred CccChhhhhhcceeEEeccCC
Q 003824 463 GANDVGMLQEADIGVGISGVE 483 (793)
Q Consensus 463 G~ND~~ml~~AdvGI~i~g~~ 483 (793)
+.||.|||+.||.++.+...+
T Consensus 184 S~~D~pmL~~a~~~~~Vnp~~ 204 (210)
T TIGR01545 184 SKQDNPLLAFCEHRWRVSKRG 204 (210)
T ss_pred CcccHHHHHhCCCcEEECcch
Confidence 999999999999999996544
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0042 Score=64.39 Aligned_cols=44 Identities=16% Similarity=0.255 Sum_probs=40.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccC
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG 347 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~ 347 (793)
+++||+.+.++.|++.||++.++||-....+..+.++.|+...+
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 57999999999999999999999999999999999999986544
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0056 Score=62.34 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=37.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
-++-||+.++++.|++.|+++.++||.....+..+.+..|+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 132 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR 132 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch
Confidence 368899999999999999999999999988888888888764
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.059 Score=58.70 Aligned_cols=68 Identities=15% Similarity=0.157 Sum_probs=48.4
Q ss_pred EcCCh---hhHHHHHHHHHhcCC---C---eEEEEcCCccChhhhhh-----cceeEEeccCCcccccccCCeeecchhh
Q 003824 435 CRSSP---KQKALVTRLVKTKTS---S---TTLAIGDGANDVGMLQE-----ADIGVGISGVEGMQAVMSSDIAIAQFRF 500 (793)
Q Consensus 435 ~r~sP---~qK~~iv~~lk~~~~---~---~vlaiGDG~ND~~ml~~-----AdvGI~i~g~~~~~a~~~aD~~i~~f~~ 500 (793)
..+.| -+|+..|+.+.+..+ . .+++|||+.||..|++. +++||.|++... ...|+|.+.+-..
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~e 368 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSE 368 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHH
Confidence 34455 389988888776543 1 25899999999999996 588888864332 2468899988666
Q ss_pred HHHHH
Q 003824 501 LERLL 505 (793)
Q Consensus 501 l~~ll 505 (793)
+..+|
T Consensus 369 V~~~L 373 (384)
T PLN02580 369 VMEFL 373 (384)
T ss_pred HHHHH
Confidence 55553
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.082 Score=64.11 Aligned_cols=202 Identities=10% Similarity=0.074 Sum_probs=99.3
Q ss_pred CceEEEEEeeecccCCChHHHHHHH-HHcCCeEEEEeCCchhhHHHHHHH---cCccccCceEEEEccCCCcccccchhh
Q 003824 292 NLILLGATAVEDKLQNGVPECIDKL-AQAGIKLWVLTGDKMETAINIGFA---CSLLRQGMRQVIISSETPESKTLEKSE 367 (793)
Q Consensus 292 ~l~~lG~~~ieD~lr~~v~~~I~~L-~~agIkv~mlTGD~~~ta~~ia~~---~gi~~~~~~~~~i~~~~~~~~~~~~~~ 367 (793)
|.||+-.....-.+-+++.+++++| ++.|+.|+++||+...+....-.. ++++..++..+...+... ..... .
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~--w~~~~-~ 680 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVE--WETCV-P 680 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCce--eeecc-h
Confidence 4455533222224556888999997 778999999999999998877744 456666655443322211 00000 0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhH-h---hhhhHHHHHHHHHhcCC-------eeEEEc
Q 003824 368 DKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTY-A---LEDDVKDLFLELAIGCA-------SVICCR 436 (793)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~-~---~~~~~~~~~~~l~~~~~-------~vi~~r 436 (793)
..+.........+....... .....-......++..-...+. . ...++..++........ .++=.+
T Consensus 681 ~~~~~w~~~v~~i~~~y~er---tpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~ 757 (854)
T PLN02205 681 VADCSWKQIAEPVMQLYTET---TDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVK 757 (854)
T ss_pred hhhHHHHHHHHHHHHHHhcC---CCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEE
Confidence 00000010001111111000 0000001123344433322211 0 01133333333222111 112122
Q ss_pred CChhhHHHHHHHHHhc---CC---CeEEEEcCCccChhhhhhcc--------------eeEEeccCCcccccccCCeeec
Q 003824 437 SSPKQKALVTRLVKTK---TS---STTLAIGDGANDVGMLQEAD--------------IGVGISGVEGMQAVMSSDIAIA 496 (793)
Q Consensus 437 ~sP~qK~~iv~~lk~~---~~---~~vlaiGDG~ND~~ml~~Ad--------------vGI~i~g~~~~~a~~~aD~~i~ 496 (793)
..--.|+..++.+.+. .| ..++++||+.||..|++.++ ++|.++.. ...|.+-+.
T Consensus 758 p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~-----~S~A~y~L~ 832 (854)
T PLN02205 758 PQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQK-----PSKAKYYLD 832 (854)
T ss_pred eCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCC-----CccCeEecC
Confidence 2233699888887531 23 47999999999999999886 34444222 246778787
Q ss_pred chhhHHHH
Q 003824 497 QFRFLERL 504 (793)
Q Consensus 497 ~f~~l~~l 504 (793)
+-..+..+
T Consensus 833 d~~eV~~l 840 (854)
T PLN02205 833 DTAEIVRL 840 (854)
T ss_pred CHHHHHHH
Confidence 76665555
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.012 Score=59.66 Aligned_cols=40 Identities=20% Similarity=0.201 Sum_probs=32.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.||+.++++.|+++|+++.++|+.....+...-...|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999876655554444554
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.014 Score=59.28 Aligned_cols=42 Identities=24% Similarity=0.175 Sum_probs=38.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
.++.+|+.+.++.|++.|+++.++||-....+..+....|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999988888888764
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.019 Score=62.48 Aligned_cols=41 Identities=17% Similarity=0.159 Sum_probs=37.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+|+.++++.|+++|+++.++|+.....+..+-...||.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~ 256 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIR 256 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCH
Confidence 47899999999999999999999999999999888888874
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.016 Score=60.19 Aligned_cols=41 Identities=29% Similarity=0.208 Sum_probs=36.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.||+.++++.|++.|+++.++||.....+..+-+..|+.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQ 139 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhc
Confidence 46799999999999999999999999988888887777764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.031 Score=58.64 Aligned_cols=40 Identities=28% Similarity=0.158 Sum_probs=34.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++-||+.++|+.|++.|+++.++||.....+..+-...++
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l 140 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAA 140 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhh
Confidence 5679999999999999999999999988877666666554
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.034 Score=53.15 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=31.3
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHH
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI 335 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~ 335 (793)
+|.+.+++.++++.++++|++++++||+....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999988774
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.042 Score=53.66 Aligned_cols=159 Identities=17% Similarity=0.178 Sum_probs=86.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++-||+.++++.|++.=-.+++-|. -..-+..+|..+|+-..+.....++-++... ... .+++....
T Consensus 83 ~lvPgA~etm~~l~~~~tp~v~STS-Y~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~---Pee---------eR~E~L~~ 149 (315)
T COG4030 83 KLVPGAEETMATLQERWTPVVISTS-YTQYLRRTASMIGVPRGELHGTEVDLDSIAV---PEE---------EREELLSI 149 (315)
T ss_pred ccCCChHHHHHHHhccCCceEEecc-HHHHHHHHHHhcCCCccccccccccCccccC---ChH---------HHHHHHHh
Confidence 5779999999999876555555554 4455678888888744332221222111110 000 01111111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhH----HHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC--CeE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDV----KDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS--STT 457 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~----~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~--~~v 457 (793)
+. ..-.++|+.|-.-+++-+ .....+++...++|- ...|+.+++.+-+..+ ...
T Consensus 150 ~~---------------~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VG-----gg~ka~i~e~~~ele~~d~sa 209 (315)
T COG4030 150 ID---------------VIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVG-----GGEKAKIMEGYCELEGIDFSA 209 (315)
T ss_pred cC---------------ccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhcc-----CcchhHHHHHHHhhcCCCcce
Confidence 10 011445554433332210 011222222222211 2457777776665322 346
Q ss_pred EEEcCCccChhhhhhcc----eeEEeccCCcccccccCCeeecc
Q 003824 458 LAIGDGANDVGMLQEAD----IGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 458 laiGDG~ND~~ml~~Ad----vGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
+.+||++.|+.||+++. +.|+..|++- |..-||+++..
T Consensus 210 ~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvis 251 (315)
T COG4030 210 VVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVIS 251 (315)
T ss_pred eEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEec
Confidence 78999999999999874 5567778877 78889988776
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.042 Score=55.72 Aligned_cols=40 Identities=15% Similarity=0.168 Sum_probs=35.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.||+.++++.|++.|++++++|+-....+......+|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCCh
Confidence 5789999999999999999999999887777777777776
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.023 Score=56.65 Aligned_cols=43 Identities=21% Similarity=0.108 Sum_probs=38.3
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
.+++.++++++++.|++.|+++.++||.....+..+.+..|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4557778899999999999999999999999999998888874
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.012 Score=60.12 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=35.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCC----chhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGD----KMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD----~~~ta~~ia~~~gi~ 344 (793)
.+.+++.+.++.+++.|+++.++|+. ...++..+.+..|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 34555999999999999999999998 566888888888873
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.045 Score=53.26 Aligned_cols=27 Identities=22% Similarity=0.220 Sum_probs=24.8
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCch
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKM 331 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~ 331 (793)
+.||++++++.|++.|+++.++|+...
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 689999999999999999999998753
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.055 Score=61.59 Aligned_cols=41 Identities=15% Similarity=0.087 Sum_probs=37.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.||+.+.++.|++.|+++.++|+-....+..+...+|+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~ 370 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLD 370 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcH
Confidence 68899999999999999999999999999999988888874
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.62 Score=50.44 Aligned_cols=207 Identities=10% Similarity=0.022 Sum_probs=100.8
Q ss_pred CceEEEEEeeec--ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHc--CccccCceEEEEccCCCcccc-----
Q 003824 292 NLILLGATAVED--KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC--SLLRQGMRQVIISSETPESKT----- 362 (793)
Q Consensus 292 ~l~~lG~~~ieD--~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~--gi~~~~~~~~~i~~~~~~~~~----- 362 (793)
|.||+-++.-.| .+-+++.++|++|. .|++++++||+.......+..-. .++..++..+.-.........
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~ 197 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQS 197 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceeccccccc
Confidence 666665554333 37788999999999 78999999999999988774221 122222222111100000000
Q ss_pred cchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhc--------CCeeEE
Q 003824 363 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG--------CASVIC 434 (793)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~--------~~~vi~ 434 (793)
........ .......+...+...........-....+++.+.-.......-.++..++..++.. .+.|+=
T Consensus 198 ~~~~~~~~--~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlE 275 (366)
T PLN03017 198 LLYQPAND--YLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFE 275 (366)
T ss_pred cccccchh--hHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEE
Confidence 00000000 00011112222221111111111122344444443332221111223333332222 222333
Q ss_pred EcCC-hhhHHHHHHHHHhcCC------CeEEEEcCCccChhhhhhcc-----eeEEeccCCcccccccCCeeecchhhHH
Q 003824 435 CRSS-PKQKALVTRLVKTKTS------STTLAIGDGANDVGMLQEAD-----IGVGISGVEGMQAVMSSDIAIAQFRFLE 502 (793)
Q Consensus 435 ~r~s-P~qK~~iv~~lk~~~~------~~vlaiGDG~ND~~ml~~Ad-----vGI~i~g~~~~~a~~~aD~~i~~f~~l~ 502 (793)
.|.. --+|+..++.+.+..+ ..++++||-..|-.|++..+ +||.++...+ ...|+|.+.+-..+.
T Consensus 276 vRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~dp~eV~ 352 (366)
T PLN03017 276 IRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQDPSEVM 352 (366)
T ss_pred ecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCCHHHHH
Confidence 3322 2389998888776432 36899999999999998763 4554532122 357899998866554
Q ss_pred HH
Q 003824 503 RL 504 (793)
Q Consensus 503 ~l 504 (793)
.+
T Consensus 353 ~f 354 (366)
T PLN03017 353 DF 354 (366)
T ss_pred HH
Confidence 44
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.032 Score=57.87 Aligned_cols=41 Identities=22% Similarity=0.089 Sum_probs=37.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.||+.++++.|++.|+++.++|+-....+..+-...|+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999888888888874
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.041 Score=58.32 Aligned_cols=37 Identities=27% Similarity=0.285 Sum_probs=31.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 340 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~ 340 (793)
++.||+.++++.|++.|+++.++|+-.......+-..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~ 180 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNT 180 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence 5789999999999999999999999877666555443
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.21 Score=48.92 Aligned_cols=46 Identities=7% Similarity=0.126 Sum_probs=35.4
Q ss_pred ChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc-----ccCceEEEE
Q 003824 308 GVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL-----RQGMRQVII 353 (793)
Q Consensus 308 ~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~-----~~~~~~~~i 353 (793)
.+.+.+..|+++|+.|+.+|.-....-...-+++|+- ..++..+.+
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~ 77 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYL 77 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEe
Confidence 4668899999999999999998887777777888763 444444444
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.091 Score=53.42 Aligned_cols=39 Identities=18% Similarity=0.091 Sum_probs=32.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.+|+.++++.|+ +|+++.++|+.....+...-...|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 47899999999999 6899999999877777666666665
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.048 Score=50.35 Aligned_cols=41 Identities=20% Similarity=0.230 Sum_probs=33.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCc--------hhhHHHHHHHcCc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDK--------METAINIGFACSL 343 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~--------~~ta~~ia~~~gi 343 (793)
-++.+++.++++.|+++|+++.++|+.. ...+..+...+|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 3578999999999999999999999987 5556666666665
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.026 Score=57.57 Aligned_cols=40 Identities=13% Similarity=0.167 Sum_probs=34.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCc----hhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDK----METAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~----~~ta~~ia~~~gi 343 (793)
.+.+++.+.++.|++.|+++.++||+. ..|+..+.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 477889999999999999999999975 4578888877776
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.1 Score=51.17 Aligned_cols=53 Identities=15% Similarity=0.118 Sum_probs=35.9
Q ss_pred CCCeEEEEcCCccChhhhhhcceeE-Eec-cCCc-ccccccC--CeeecchhhHHHHH
Q 003824 453 TSSTTLAIGDGANDVGMLQEADIGV-GIS-GVEG-MQAVMSS--DIAIAQFRFLERLL 505 (793)
Q Consensus 453 ~~~~vlaiGDG~ND~~ml~~AdvGI-~i~-g~~~-~~a~~~a--D~~i~~f~~l~~ll 505 (793)
....+++|||+.+|+.+-+.|++.. ++. |... ......+ |+++.++..+..++
T Consensus 119 ~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l 176 (181)
T PRK08942 119 DLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQAL 176 (181)
T ss_pred ChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHH
Confidence 3467999999999999999999854 332 2111 1112335 88988887776653
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.067 Score=59.13 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=32.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHH-HcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGF-ACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~-~~gi 343 (793)
++.+|+.++++.|++.|+++.|+|+-....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999998777665543 4454
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.071 Score=50.57 Aligned_cols=38 Identities=16% Similarity=0.248 Sum_probs=31.9
Q ss_pred hhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEE
Q 003824 440 KQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVG 478 (793)
Q Consensus 440 ~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~ 478 (793)
.+|..+|+.+++ +.+.+.++|||+.|+++-+.+|+=.|
T Consensus 146 ~dK~~vI~~l~e-~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 146 HDKSSVIHELSE-PNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CCcchhHHHhhc-CCceEEEecCCcccccHhhhhhhHhh
Confidence 478999999998 78889999999999988777776554
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.062 Score=53.46 Aligned_cols=40 Identities=18% Similarity=0.222 Sum_probs=35.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.+++.++++.|++.|+++.++|+-+...+..+....|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 5789999999999999999999999888877777777776
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.042 Score=58.77 Aligned_cols=44 Identities=20% Similarity=0.083 Sum_probs=40.2
Q ss_pred eecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 301 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 301 ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
..+++.+++.++|+.|++.|++++++||....++..+.+.+++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 56789999999999999999999999999999999888888763
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.048 Score=52.51 Aligned_cols=43 Identities=21% Similarity=0.205 Sum_probs=39.1
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
..++.+++.+.++.|++.|++++++|+-+........+..|+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 3478999999999999999999999999999888899888875
|
... |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.12 Score=52.53 Aligned_cols=41 Identities=15% Similarity=0.055 Sum_probs=34.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+|+.++++.|+++|+++.++|+-....+...-...|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 57899999999999999999999998877777666666653
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.15 Score=51.66 Aligned_cols=40 Identities=25% Similarity=0.322 Sum_probs=35.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+|+.++++.|++. +++.++|+-....+..+.+..|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999998888887777777763
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.06 Score=52.82 Aligned_cols=38 Identities=21% Similarity=0.261 Sum_probs=30.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.||+.++|+.|+++|+++.++|+... +..+.+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 6789999999999999999999997532 3445555554
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.13 Score=50.21 Aligned_cols=39 Identities=26% Similarity=0.239 Sum_probs=32.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.|++.++++.|++.|++++++|+-.... ..+...+|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l 123 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGL 123 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCC
Confidence 588999999999999999999999987766 444444665
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.15 Score=49.47 Aligned_cols=51 Identities=22% Similarity=0.181 Sum_probs=41.2
Q ss_pred eEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCC-chhhHHHHHHHcCcc
Q 003824 294 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGD-KMETAINIGFACSLL 344 (793)
Q Consensus 294 ~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD-~~~ta~~ia~~~gi~ 344 (793)
......+-+-++.+|+.++++.|+++|+++.++|+- ....+..+-...|+-
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 344445555678999999999999999999999975 788888887777763
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.12 Score=52.48 Aligned_cols=30 Identities=23% Similarity=0.376 Sum_probs=26.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhh
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMET 333 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~t 333 (793)
++.+|+.++|+.|++.|+++.++||-....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~ 107 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRH 107 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhh
Confidence 578999999999999999999999876543
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.082 Score=51.81 Aligned_cols=39 Identities=18% Similarity=0.244 Sum_probs=32.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
-++.||+.++++.|++.|+++.++|+. ..+..+-+..|+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l 125 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGL 125 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcCh
Confidence 368999999999999999999999987 445556666665
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.11 E-value=1.9 Score=46.62 Aligned_cols=234 Identities=13% Similarity=0.085 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHhhhccccHHHHHHHHHHHhh---------cCceEEEEEeeec--ccCCChHHHHHHHHHcCCeEEEE
Q 003824 258 KEYKQFNEEFTEAKNSVSADREELAEEIAEKIE---------KNLILLGATAVED--KLQNGVPECIDKLAQAGIKLWVL 326 (793)
Q Consensus 258 ~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie---------~~l~~lG~~~ieD--~lr~~v~~~I~~L~~agIkv~ml 326 (793)
++|..|..++..|...+ ++...... -|.||+-++---| .+-+++.++|+.|. .+..++++
T Consensus 71 ~~~~~w~~~~p~a~~~~--------~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIv 141 (354)
T PLN02151 71 NKQSCWIKEHPSALNMF--------EEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIV 141 (354)
T ss_pred hhHHHHHHhCChHHHHH--------HHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEE
Confidence 57899999988776544 22222222 2333332221222 25567888999999 56799999
Q ss_pred eCCchhhHHHHHHHcCc--cccCceEEEEccCCCcccccchh----hhHHHHHHHHHHHHHHHHhhhhhccccccCCCCC
Q 003824 327 TGDKMETAINIGFACSL--LRQGMRQVIISSETPESKTLEKS----EDKSAAAAALKASVLHQLIRGKELLDSSNESLGP 400 (793)
Q Consensus 327 TGD~~~ta~~ia~~~gi--~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (793)
||+..........-.++ ....+-.+...... ......+. ...... ....+.+...+...........-....
T Consensus 142 SGR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g-~~~~~~~~~~~~~~~~~~-~~~i~~v~~~l~~~~~~~pG~~VE~K~ 219 (354)
T PLN02151 142 SGRCREKVSSFVKLTELYYAGSHGMDIKGPEQG-SKYKKENQSLLCQPATEF-LPVINEVYKKLVEKTKSIPGAKVENNK 219 (354)
T ss_pred ECCCHHHHHHHcCCccceEEEeCCceeecCCCC-ccccccccccccccchhh-HHHHHHHHHHHHHHHhcCCCCEEEecC
Confidence 99999888777643332 11111111000000 00000000 000000 001111111221111111111111233
Q ss_pred eEEEEeCchhhHhhhhhHHHHHHHHHhc--------CCeeEEEcCC-hhhHHHHHHHHHhcCC------CeEEEEcCCcc
Q 003824 401 LALIIDGKSLTYALEDDVKDLFLELAIG--------CASVICCRSS-PKQKALVTRLVKTKTS------STTLAIGDGAN 465 (793)
Q Consensus 401 ~~lvi~G~~l~~~~~~~~~~~~~~l~~~--------~~~vi~~r~s-P~qK~~iv~~lk~~~~------~~vlaiGDG~N 465 (793)
+++.+.-.....-...++..++..++.. .+.|+=.|.. .-+|+..++.+.+..+ ..++++||-..
T Consensus 220 ~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~T 299 (354)
T PLN02151 220 FCASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRT 299 (354)
T ss_pred cEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCc
Confidence 4444433222111001222333332222 2333333432 3489999888776432 24899999999
Q ss_pred Chhhhhhc-----ceeEEeccCCcccccccCCeeecchhhHHHHH
Q 003824 466 DVGMLQEA-----DIGVGISGVEGMQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 466 D~~ml~~A-----dvGI~i~g~~~~~a~~~aD~~i~~f~~l~~ll 505 (793)
|-.|++.. ++||-++... ....|+|.+.+-..+..+|
T Consensus 300 DEDaF~~L~~~~~G~gI~Vg~~~---k~T~A~y~L~dp~eV~~~L 341 (354)
T PLN02151 300 DEDAFKILRDKKQGLGILVSKYA---KETNASYSLQEPDEVMEFL 341 (354)
T ss_pred HHHHHHHHhhcCCCccEEeccCC---CCCcceEeCCCHHHHHHHH
Confidence 99999864 4555443211 1247899998866655553
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.2 Score=47.48 Aligned_cols=40 Identities=20% Similarity=0.335 Sum_probs=33.0
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHc
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 341 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~ 341 (793)
+.+..+|+.+.++.|++.|+++.++|+-....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 3445689999999999999999999999888777665543
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.49 Score=46.12 Aligned_cols=48 Identities=19% Similarity=0.182 Sum_probs=33.2
Q ss_pred CCeEEEEcCCccChhhhhhccee--EEe-ccCCcc-cccccCCeeecchhhH
Q 003824 454 SSTTLAIGDGANDVGMLQEADIG--VGI-SGVEGM-QAVMSSDIAIAQFRFL 501 (793)
Q Consensus 454 ~~~vlaiGDG~ND~~ml~~AdvG--I~i-~g~~~~-~a~~~aD~~i~~f~~l 501 (793)
...++||||..+|+.+=+.|++. |++ .|.... .....+|+++.++..|
T Consensus 123 ~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 123 MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 36789999999999999999985 344 232211 1123489998876654
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.42 Score=49.64 Aligned_cols=33 Identities=12% Similarity=0.288 Sum_probs=28.1
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhH
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETA 334 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta 334 (793)
..++-||+.+.++.|++.|+++.++|++.....
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~ 148 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEK 148 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchH
Confidence 345789999999999999999999999875433
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.13 Score=48.56 Aligned_cols=42 Identities=21% Similarity=0.041 Sum_probs=36.5
Q ss_pred eecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 301 VEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 301 ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
..-+++||+.+.++.|+ .++++.+.|+-....+..+-+.+++
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 33468999999999999 5799999999999999988877775
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.34 Score=48.31 Aligned_cols=39 Identities=15% Similarity=0.116 Sum_probs=30.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++-||+.++++.|++.|+++.++|+-... +......+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 57899999999999999999999985543 3445555554
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=93.00 E-value=0.35 Score=46.84 Aligned_cols=40 Identities=20% Similarity=0.302 Sum_probs=32.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCc-hhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDK-METAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~-~~ta~~ia~~~gi 343 (793)
.+.+++.++++.|++.|+++.++|+-+ ...+..+.+.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 578999999999999999999999987 4555566555554
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.68 E-value=0.37 Score=46.22 Aligned_cols=26 Identities=31% Similarity=0.511 Sum_probs=23.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCC
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGD 329 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD 329 (793)
++-+|+.++++.|+++|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46789999999999999999999975
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=92.41 E-value=0.3 Score=45.99 Aligned_cols=27 Identities=26% Similarity=0.369 Sum_probs=24.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDK 330 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~ 330 (793)
++.||+.++++.|++.|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999875
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=91.93 E-value=1 Score=46.22 Aligned_cols=187 Identities=13% Similarity=0.093 Sum_probs=73.0
Q ss_pred ccCCChHHHHHHHHHcC-CeEEEEeCCchhhHHHHHHH--cCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAG-IKLWVLTGDKMETAINIGFA--CSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASV 380 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~ag-Ikv~mlTGD~~~ta~~ia~~--~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (793)
.+.+++.++++.|.+.. ..|+|+||++.........- ++++.+++..+...+......... ...... .+.+
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~~~-~~~~~~-----~~~~ 92 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNLPA-DEDLEW-----KDEV 92 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-TTG-GGGHHH-----HHHH
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCcccccccccc-ccchHH-----HHHH
Confidence 45578889999998764 47999999999886555422 334444444333333321111000 111111 1111
Q ss_pred HHHHhhhhhccccccCCCCCeEEEEeCchhhHh----hhhhHHHHHHHHH--------hcCCeeEEEcCChhhHHHHHHH
Q 003824 381 LHQLIRGKELLDSSNESLGPLALIIDGKSLTYA----LEDDVKDLFLELA--------IGCASVICCRSSPKQKALVTRL 448 (793)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~----~~~~~~~~~~~l~--------~~~~~vi~~r~sP~qK~~iv~~ 448 (793)
...+...........-.....++.+.-.....- ...++...+..+. ...+.+|=.|..-..|+..|+.
T Consensus 93 ~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~~ 172 (235)
T PF02358_consen 93 REILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVRR 172 (235)
T ss_dssp HHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHHH
T ss_pred HHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHHH
Confidence 111111111111000011122333322221111 1112222222221 2234556666666669999997
Q ss_pred HHhcCC------CeEEEEcCCccChhhhhhc------ceeEEeccCCcccccccCCeeec
Q 003824 449 VKTKTS------STTLAIGDGANDVGMLQEA------DIGVGISGVEGMQAVMSSDIAIA 496 (793)
Q Consensus 449 lk~~~~------~~vlaiGDG~ND~~ml~~A------dvGI~i~g~~~~~a~~~aD~~i~ 496 (793)
+-+..+ ..++++||...|-.|++.. ++||-+...+......+|+|-+.
T Consensus 173 ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 173 LLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLD 232 (235)
T ss_dssp HHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----------------
T ss_pred HHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccc
Confidence 776544 3799999999999999874 45555544332223455666554
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=91.55 E-value=0.39 Score=44.06 Aligned_cols=39 Identities=10% Similarity=0.060 Sum_probs=32.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCC-chhhHHHHHHHcC
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGD-KMETAINIGFACS 342 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD-~~~ta~~ia~~~g 342 (793)
++.+|+.++++.|+++|+++.++|+- ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 6666655554444
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=91.01 E-value=0.47 Score=47.62 Aligned_cols=28 Identities=25% Similarity=0.280 Sum_probs=25.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCch
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKM 331 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~ 331 (793)
++.|++.++++.|++.|+++.++|+...
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~ 121 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFP 121 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5789999999999999999999998654
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.93 E-value=0.64 Score=50.41 Aligned_cols=27 Identities=33% Similarity=0.411 Sum_probs=24.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCC
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGD 329 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD 329 (793)
-++.|++.++++.|+++|+++.|+|+-
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 357899999999999999999999983
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=90.30 E-value=1.4 Score=41.63 Aligned_cols=113 Identities=19% Similarity=0.168 Sum_probs=69.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
|..++++.+..+.+++.|.+++.||++..--|...-.-+.=...+
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~----------------------------------- 70 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQ----------------------------------- 70 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhC-----------------------------------
Confidence 799999999999999999999999999865443322111000000
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc----CCCeEE
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK----TSSTTL 458 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~----~~~~vl 458 (793)
. ...+.-.+..+-..+-..+. .-+..+-.-+.|...++.++.. .....+
T Consensus 71 -----~-------~~lP~Gpv~~sP~~l~~al~---------------rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~a 123 (157)
T PF08235_consen 71 -----G-------HNLPDGPVLLSPDSLFSALH---------------REVISKDPEEFKIACLRDLRALFPPDGNPFYA 123 (157)
T ss_pred -----C-------ccCCCCCEEECCcchhhhhh---------------ccccccChHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 0 00011112222222111111 1144555556788888888764 457899
Q ss_pred EEcCCccChhhhhhcceeE
Q 003824 459 AIGDGANDVGMLQEADIGV 477 (793)
Q Consensus 459 aiGDG~ND~~ml~~AdvGI 477 (793)
++|...+|+.+.++++|--
T Consensus 124 gfGN~~tDv~aY~~vGip~ 142 (157)
T PF08235_consen 124 GFGNRSTDVIAYKAVGIPK 142 (157)
T ss_pred ecCCcHHHHHHHHHcCCCh
Confidence 9999999999999888753
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=90.04 E-value=1.2 Score=45.14 Aligned_cols=30 Identities=23% Similarity=0.285 Sum_probs=27.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhh
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMET 333 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~t 333 (793)
|.-+++.++++.|++.|++|+++||+....
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 677899999999999999999999998654
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.01 E-value=0.69 Score=46.81 Aligned_cols=37 Identities=5% Similarity=0.098 Sum_probs=29.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.+|++++++.| ++++.++|+.....+...-+..|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l 124 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGM 124 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcCh
Confidence 4678999999998 499999999887766666555665
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=89.76 E-value=1.6 Score=44.41 Aligned_cols=41 Identities=20% Similarity=0.169 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHH--HHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKL--AQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L--~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
|+.++.+++++.+ ++.|+.+.++|--+..-...+-+.-|+-
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 5789999999999 5689999999999888888888888874
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=89.73 E-value=1.6 Score=44.14 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=31.1
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHH
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 338 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia 338 (793)
+-++.+|+.++++.|+++|+++.++|..+......+-
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~ 129 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLF 129 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH
Confidence 3478999999999999999999999998766555444
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=89.54 E-value=1.6 Score=42.03 Aligned_cols=27 Identities=22% Similarity=0.406 Sum_probs=23.6
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCch
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKM 331 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~ 331 (793)
+-+|+.++++.|+++|+++.++|....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999997543
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=88.44 E-value=1.8 Score=54.45 Aligned_cols=41 Identities=20% Similarity=0.024 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
.+.+|+.+.++.|+++|+++.++|+-....+..+-...|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 46799999999999999999999999888887777777763
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=87.95 E-value=0.98 Score=48.70 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=32.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 340 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~ 340 (793)
++-++++++|+.|++.|+++.++|.-+...|..+-..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 3568999999999999999999999998888877765
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=87.42 E-value=2.9 Score=42.99 Aligned_cols=47 Identities=9% Similarity=0.133 Sum_probs=35.7
Q ss_pred EEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHH--HHHHHcCc
Q 003824 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI--NIGFACSL 343 (793)
Q Consensus 297 G~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~--~ia~~~gi 343 (793)
|.+.-.+.+-|+++++++.|+++|+++.++|.-....+. ......|+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl 65 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGI 65 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCC
Confidence 555556778999999999999999999999995443333 34455665
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=86.77 E-value=2.6 Score=41.72 Aligned_cols=39 Identities=13% Similarity=0.058 Sum_probs=25.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.||+.++++.|++.+ +.+++|.-+..+....-+..++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 47899999999999975 5677776544433333333443
|
2 hypothetical protein; Provisional |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.31 E-value=5.7 Score=39.30 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=32.2
Q ss_pred ccCCChHHHHHHHHHcCC-eEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGI-KLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agI-kv~mlTGD~~~ta~~ia~~~gi 343 (793)
|+-|++.++|+.+++.|- .++++|--|.--...+-+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 678999999999999997 8888888777666666666655
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=86.17 E-value=0.71 Score=40.39 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=35.5
Q ss_pred EEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHH---HHcCc
Q 003824 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG---FACSL 343 (793)
Q Consensus 297 G~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia---~~~gi 343 (793)
|++...+.+=|++.++|+.|+++|++++++|.....+...++ +.+|+
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 455567788999999999999999999999999877755555 44555
|
... |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=84.89 E-value=4.2 Score=39.53 Aligned_cols=46 Identities=20% Similarity=0.411 Sum_probs=33.8
Q ss_pred eeEEEcCChhh--------HHHHHHHHHhcC--CCeEEEEcCCccChhhhhhccee
Q 003824 431 SVICCRSSPKQ--------KALVTRLVKTKT--SSTTLAIGDGANDVGMLQEADIG 476 (793)
Q Consensus 431 ~vi~~r~sP~q--------K~~iv~~lk~~~--~~~vlaiGDG~ND~~ml~~AdvG 476 (793)
.+.+|.-.|++ ...+.+.++++. -....+|||-..|..+=..|+++
T Consensus 89 ~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 89 GILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred eEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 44566666663 467777777732 26789999999999988888876
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=83.14 E-value=2.6 Score=41.89 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=26.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhh
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMET 333 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~t 333 (793)
++.||+.++++.|+++|+++.++|.-+...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 478999999999999999999999966443
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=80.73 E-value=23 Score=40.54 Aligned_cols=119 Identities=16% Similarity=0.219 Sum_probs=66.1
Q ss_pred hhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchhhHHHHHHHhhhhHHhHhhH
Q 003824 439 PKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISS 518 (793)
Q Consensus 439 P~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~l~~lll~~GR~~~~~i~~ 518 (793)
-++|..-++.... ......+.||+.||.+||+.|+-+..+..+.. . .+...++.+++++..||..+.-.-.
T Consensus 174 Ge~Kv~rl~~~~g-~~~~~~aYgDS~sD~plL~~a~e~y~V~~~~~------~--~~~~~~~~~~~~fhdgrl~~~p~~~ 244 (497)
T PLN02177 174 GDHKRDAVLKEFG-DALPDLGLGDRETDHDFMSICKEGYMVPRTKC------E--PLPRNKLLSPVIFHEGRLVQRPTPL 244 (497)
T ss_pred cHHHHHHHHHHhC-CCCceEEEECCccHHHHHHhCCccEEeCCCCC------C--cCCcccCCCceeeeCCcccCCCCHH
Confidence 4567665552211 11223799999999999999999998854221 1 1445567778866679998866554
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHHHHHHhhccccceeeecc
Q 003824 519 MICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVF 572 (793)
Q Consensus 519 ~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~lp~l~l~~~ 572 (793)
..+..+.. +-+.+++.+.-++.+. . .+..+..+.+-...+.+-+.|.+
T Consensus 245 ~~l~~~~~-~p~g~~l~~~r~~~~~---~--lp~~~~~~~~~~~Gv~v~v~G~e 292 (497)
T PLN02177 245 VALLTFLW-MPIGFILSLLRVYLNI---P--LPERIARYNYKLLGIRLIVKGNP 292 (497)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHhh---h--hHHHHHHHHHHHcCcEEEEEcCC
Confidence 44444333 1333333333333321 1 12222333334445566666643
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=80.72 E-value=2.9 Score=43.49 Aligned_cols=47 Identities=19% Similarity=0.262 Sum_probs=36.6
Q ss_pred EEEeeecc----cCCChHHHHHHHHHcCCeEEEEeCCchhh---HHHHHHHcCc
Q 003824 297 GATAVEDK----LQNGVPECIDKLAQAGIKLWVLTGDKMET---AINIGFACSL 343 (793)
Q Consensus 297 G~~~ieD~----lr~~v~~~I~~L~~agIkv~mlTGD~~~t---a~~ia~~~gi 343 (793)
|++.-.+. +-|++.++|+.|+++|++++++||.+..+ ......++|+
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~ 63 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGF 63 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence 44445455 78899999999999999999999988776 4444455665
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.42 E-value=2.1 Score=44.32 Aligned_cols=45 Identities=18% Similarity=0.283 Sum_probs=39.8
Q ss_pred EEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHc
Q 003824 297 GATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 341 (793)
Q Consensus 297 G~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~ 341 (793)
|++.-.+.+-|++.++|+.|+++|++++++||....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 566666788999999999999999999999999999888888764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 793 | ||||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 3e-08 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 2e-06 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 1e-05 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 8e-05 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 3e-04 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 3e-04 |
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 793 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-31 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-29 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 6e-28 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 3e-19 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 4e-06 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 3e-16 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 2e-04 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 4e-16 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-06 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 2e-06 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 1e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 2e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 4e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 4e-05 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 5e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 5e-05 | |
| 1qzv_F | 154 | Plant photosystem I: subunit PSAF; photosynthesis, | 2e-04 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 3e-04 | |
| 3lvg_D | 190 | LCB, clathrin light chain B; SELF assembly, coated | 4e-04 | |
| 3lvg_D | 190 | LCB, clathrin light chain B; SELF assembly, coated | 6e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 2e-31
Identities = 93/480 (19%), Positives = 159/480 (33%), Gaps = 122/480 (25%)
Query: 19 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 78
E LG I SDKTGTLT N M + V + ++ +
Sbjct: 341 ETLGCTSVICSDKTGTLTTNQM---------S--------VCKMFI---IDKVDGDFCSL 380
Query: 79 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 138
E + + E E + N + D + + + A+C+ + + +E G E
Sbjct: 381 NEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGE 440
Query: 139 SPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSV 198
E A ++ + ++S E + + + LEFS RK MSV
Sbjct: 441 -ATETALTTLVEKMN--VFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSV 497
Query: 199 IVRSEEGTL-----LLLSKGA-DSVM----FERLAENGREFEEQTKEHI----NEYADA- 243
+ + + KGA + V+ + R+ KE I E+
Sbjct: 498 YCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGR 557
Query: 244 -GLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVE 302
LR L LA R+ K + ++ + + E +L +G +
Sbjct: 558 DTLRCLALATRDTPPKREEMVLDDSSR----------------FMEYETDLTFVGVVGML 601
Query: 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 362
D + V I AGI++ ++TGD TAI I R++ I E
Sbjct: 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC----------RRIGIFGEN----- 646
Query: 363 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLF 422
E+ D++ G+E D + +
Sbjct: 647 -EEVADRA--------------YTGREFDDLPLA----------------EQREACRR-- 673
Query: 423 LELAIGCASVICCRSSPKQKALVTRLVKT-----KTSSTTLAIGDGANDVGMLQEADIGV 477
A R P K +++V+ + ++ T GDG ND L++A+IG+
Sbjct: 674 -------ACCF-ARVEPSHK---SKIVEYLQSYDEITAMT---GDGVNDAPALKKAEIGI 719
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 1e-29
Identities = 91/492 (18%), Positives = 145/492 (29%), Gaps = 147/492 (29%)
Query: 19 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 78
E LG I SDKTGTLT N M +
Sbjct: 375 ETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIH---------------------SADTT 413
Query: 79 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 138
++ + ++ + R+L +C+ A +
Sbjct: 414 EDQSGQT----------------FDQSSETWRALCRVLTLCNRA--AFKSGQDAVPVPKR 455
Query: 139 S----PDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 194
E A + + + + + + F+S+ K
Sbjct: 456 IVIGDASETALLKFSELTL----------GNAMGY--------RERFPKVCEIPFNSTNK 497
Query: 195 RMSVIVRSEE---GTLLLLSKGADSVMFER---LAENG--REFEEQTKEHI----NEYAD 242
I E+ +L+ KGA + ER + G +EQ +E
Sbjct: 498 FQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGG 557
Query: 243 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVE 302
G R L L EK+Y EA N L G ++
Sbjct: 558 LGERVLGFCQLYLSEKDYPPGYAFDVEAMNFP---------------TSGLSFAGLVSMI 602
Query: 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 362
D + VP+ + K AGI++ ++TGD TA I V I SE E+
Sbjct: 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIA----------ASVGIISEGSETVE 652
Query: 363 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLF 422
+ + + +I G +L D L + ++
Sbjct: 653 DIAARLRVPVDQVNRKDARACVINGMQLKDMDPS----------------ELVEALRTH- 695
Query: 423 LELAIGCASVICCRSSPKQKALVTRLVK-----------TKTSSTTLAIGDGANDVGMLQ 471
++ R+SP+QK +V+ T GDG ND L+
Sbjct: 696 -------PEMVFARTSPQQK---LVIVESCQRLGAIVAVT---------GDGVNDSPALK 736
Query: 472 EADIGV--GISG 481
+ADIGV GI+G
Sbjct: 737 KADIGVAMGIAG 748
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 6e-28
Identities = 102/492 (20%), Positives = 155/492 (31%), Gaps = 147/492 (29%)
Query: 19 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEE 78
E LG TI SDKTGTLT N M T V + +
Sbjct: 370 ETLGSTSTICSDKTGTLTQNRM---------T-----VAHM---------------WFDN 400
Query: 79 QEDKASIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE 138
Q +A + + R+ A+C+ A +
Sbjct: 401 QIHEADTTENQSGAAF--------DKTSATWSALSRIAALCNRA--VFQAGQDNVPILKR 450
Query: 139 S----PDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRK 194
S E+A + SV + + + F+S+ K
Sbjct: 451 SVAGDASESALLKCIELCC----------GSVQGM--------RDRNPKIVEIPFNSTNK 492
Query: 195 RMSVIVRSEEGT---LLLLSKGADSVMFER---LAENG--REFEEQTKEHI----NEYAD 242
I +E+ + LL+ KGA + +R + NG +E KE E
Sbjct: 493 YQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGG 552
Query: 243 AGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVE 302
G R L + L E +Y + + +L +G A+
Sbjct: 553 LGERVLGFCHFALPEDKYN---------------EGYPFDADEPNFPTTDLCFVGLMAMI 597
Query: 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKT 362
D + VP+ + K AGIK+ ++TGD TA I + V I SE E+
Sbjct: 598 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA----------KGVGIISEGNETIE 647
Query: 363 LEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLF 422
+ ++ G +L D S E L+D +
Sbjct: 648 DIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTE----------------VLDDILHYH- 690
Query: 423 LELAIGCASVICCRSSPKQKALVTRLVK-----------TKTSSTTLAIGDGANDVGMLQ 471
++ R+SP+QK +V+ T GDG ND L+
Sbjct: 691 -------TEIVFARTSPQQK---LIIVEGCQRQGAIVAVT---------GDGVNDSPALK 731
Query: 472 EADIGV--GISG 481
+ADIGV GISG
Sbjct: 732 KADIGVAMGISG 743
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 3e-19
Identities = 83/578 (14%), Positives = 165/578 (28%), Gaps = 148/578 (25%)
Query: 175 TKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTK 234
+ ++ L F+ KR ++ G +SKGA + E LA+ + ++
Sbjct: 386 KEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILE-LAKASNDLSKKVL 444
Query: 235 EHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLI 294
I++YA+ GLR+L +A + + EK E
Sbjct: 445 SIIDKYAERGLRSLAVARQVVPEKT--------------------------KESPGAPWE 478
Query: 295 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIIS 354
+G + D ++ E I + G+ + ++TGD++ G R++ +
Sbjct: 479 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG----------RRLGMG 528
Query: 355 SETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYAL 414
+ S L+ + + ++ + L DG +A
Sbjct: 529 TNMYPSSA---------------------LLGTHKDANLASIPVEELIEKADG----FA- 562
Query: 415 EDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKT-KTSSTTLA-IGDGANDVGMLQE 472
P+ K +VK + + GDG ND L++
Sbjct: 563 ---------------------GVFPEHKY---EIVKKLQERKHIVGMTGDGVNDAPALKK 598
Query: 473 ADIGVGI-SGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIA 529
ADIG+ + + + +SDI + + + +L ++R+ + Y I
Sbjct: 599 ADIGIAVADATDAARG--ASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVSITIR 655
Query: 530 FGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQ 589
F F + L ++ + S P
Sbjct: 656 IVFGFMLIALIWEFDFSAF-----MVLIIAILNDGTIMTISKDRVKPSPT-----PD--- 702
Query: 590 EGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLEILGTTMYTCV 649
SW IF + V+G T+
Sbjct: 703 --------SW------------KLKEIFATGV-------------VLGGYQAIMTVIF-- 727
Query: 650 VWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAP 709
W + S T+ + Y+ + +++ + F+E P
Sbjct: 728 FWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRSWSFVE----RP 783
Query: 710 SFWLITLLVLMSSLLPYFTYSAIQMRFFPLHHQMIQWF 747
L+ ++ + A F + W
Sbjct: 784 GALLMIAFLIAQLIATLIAVYANW-EFAKIRGIGWGWA 820
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 4e-06
Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 13/89 (14%)
Query: 19 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMA----RRKGSPLEEE 74
EE+ +D + SDKTGTLT N + K + G +V A ++
Sbjct: 318 EEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAA 377
Query: 75 VTEEQEDKASIKG---------FNFEDER 94
+ D + FN D+R
Sbjct: 378 MVGMLADPKEARAGIREVHFLPFNPVDKR 406
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 82.4 bits (204), Expect = 3e-16
Identities = 50/316 (15%), Positives = 91/316 (28%), Gaps = 110/316 (34%)
Query: 176 KVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKE 235
V Y +L F K++ +V S +G + KGA + + E E+ +
Sbjct: 438 SVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLK-TVEEDHPIPEEVDQ 496
Query: 236 HI----NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEK 291
E+A G R+L +A + E
Sbjct: 497 AYKNKVAEFATRGFRSLGVARKR----------------------------------GEG 522
Query: 292 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 351
+ +LG D ++ + + + G+ + +LTGD + A RQ+
Sbjct: 523 SWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETS----------RQL 572
Query: 352 IISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLT 411
+ + ++ L D + DG
Sbjct: 573 GLGTNIYNAERLG----------------------LGGGGDMPGSEVYDFVEAADG---- 606
Query: 412 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK------TSSTTLAIGDGAN 465
+A P+ K V +++ + T GDG N
Sbjct: 607 FA----------------------EVFPQHKYNVVEILQQRGYLVAMT-------GDGVN 637
Query: 466 DVGMLQEADIGVGISG 481
D L++AD G+ + G
Sbjct: 638 DAPSLKKADTGIAVEG 653
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 2e-04
Identities = 21/147 (14%), Positives = 43/147 (29%), Gaps = 35/147 (23%)
Query: 19 EELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMAR------RKGSPLE 72
E L V+ + SDKTGTLT N + G ++ + ++
Sbjct: 367 ESLAGVEILCSDKTGTLTKNKLSLHDPYTVA---GVDPEDLMLTACLAASRKKKGIDAID 423
Query: 73 ----EEVTEEQEDKASIKG--------FNFEDERIM------NGSWVNEPHADVIQK--F 112
+ + K+ + F+ ++++ G + K
Sbjct: 424 KAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERI------TCVKGAP 477
Query: 113 LRLLAICHTALPEVDEENGKISYEAES 139
L +L P +E + +
Sbjct: 478 LFVLKTVEEDHPIPEEVDQAYKNKVAE 504
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 4e-16
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 32/131 (24%)
Query: 176 KVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFER---LAENG--REFE 230
+ + ++ + F R+RMSV+V L+ KGA + + NG +
Sbjct: 51 SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLD 110
Query: 231 EQTKEHI----NEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIA 286
+ I + GLR + +A + L +E +
Sbjct: 111 DIMLRKIKRVTDTLNRQGLRVVAVATKYLPARE-----------------------GDYQ 147
Query: 287 EKIEKNLILLG 297
E +LIL G
Sbjct: 148 RADESDLILEG 158
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.4 bits (148), Expect = 1e-09
Identities = 56/434 (12%), Positives = 130/434 (29%), Gaps = 132/434 (30%)
Query: 71 LEEEVTEEQEDKASI-KGFNFEDERIMNGSWVNEPHADV--IQKFLRLLAICHTALPEVD 127
L + EQ + + + + + +R+ N + V + +V +Q +L+L AL E+
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY-NVSRLQPYLKL----RQALLELR 148
Query: 128 EEN----------GKISYEAESPDEAAFVIAARELGFEFY----ERTQTSISV------- 166
GK + ++ F+ + + + +V
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQ---CKMDFKIFWLNLKNCNSPETVLEMLQKL 205
Query: 167 -HELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN 225
+++DP ++ + S ++ + + R + + E LL+L +V
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL----LNV-------- 253
Query: 226 GREFEEQTKEHINEYADAGLRTLILAYRE------LDEKEYKQFNEE-----FTEAK--- 271
Q + N + + + L+ R L + + T +
Sbjct: 254 ------QNAKAWNAF-NLSCKILLTT-RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305
Query: 272 ---NSVSADREELAEEIAEKIEKNLI-LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLT 327
+ ++L E + ++ +++G D +
Sbjct: 306 LLLKYLDCRPQDLPRE-VLTTNPRRLSIIAE-----SIRDG-LATWDNWKH-------VN 351
Query: 328 GDKMETAINIGFAC---SLLRQGMRQVII---SSETPESKTLE------KSEDKSAAAAA 375
DK+ T I + R+ ++ + S+ P L D
Sbjct: 352 CDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPT-ILLSLIWFDVIKSDVM----- 405
Query: 376 LKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICC 435
V+++L + L++ K T ++ ++LEL
Sbjct: 406 ---VVVNKLHK-YSLVEK------------QPKESTISIP----SIYLEL---------K 436
Query: 436 RSSPKQKALVTRLV 449
+ AL +V
Sbjct: 437 VKLENEYALHRSIV 450
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 1e-06
Identities = 61/504 (12%), Positives = 128/504 (25%), Gaps = 181/504 (35%)
Query: 167 HELDPVTGTKVERSYSLLNVLE-FSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN 225
H +D TG E Y ++L F + ++ +LSK
Sbjct: 5 HHMDFETG---EHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSK------------- 48
Query: 226 GREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEI 285
E + + A +G L E+ ++F EE + + + L I
Sbjct: 49 -EEIDHIIMS---KDAVSGTLRLFWTLLSKQEEMVQKFVEE------VLRINYKFLMSPI 98
Query: 286 A-EKIEKNLILLGATAVEDKLQNGV----------PECIDKLAQAGIKL----------- 323
E+ + +++ D+L N + KL QA ++L
Sbjct: 99 KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGV 158
Query: 324 -----WVLTGD-----KMETA-------INIGFACS----------LLRQGMRQVIISSE 356
+ D K++ +N+ S LL Q S+
Sbjct: 159 LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218
Query: 357 TPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALED 416
+ L ++ L +L++ K L++ L
Sbjct: 219 HSSNIKLRIHSIQAE---------LRRLLKSKPY---------ENCLLV----L-----L 251
Query: 417 DVKDL-----FLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 471
+V++ F + C K L+T T+ T + L
Sbjct: 252 NVQNAKAWNAF---NLSC------------KILLT----TRFKQVTDFLSAATTTHISLD 292
Query: 472 EADIGVGISGVEGM--------------QAVMSSDIAIAQFRFLERLLLVHGHWCYRRIS 517
+ + V+ + + + ++ ++ E + W
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA--ESIRDGLATWDN---- 346
Query: 518 SMICYFFYKNIAFGFTL-FFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDV 576
+ + + +++ L VF
Sbjct: 347 ----WKHVNCDKLTTIIESSLNVLEPAEYRKMFDR-----------------LSVFPPSA 385
Query: 577 SARFCLKFPLLYQEGVQNILFSWT 600
P + +++ W
Sbjct: 386 ------HIP----TILLSLI--WF 397
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Query: 442 KALVTRLVKTKTS-STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS-SDIAIAQFR 499
K V +L+K K + IGDGA D+ AD +G G Q V + I F
Sbjct: 158 KGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFV 217
Query: 500 FLERLL 505
L L
Sbjct: 218 ELLGEL 223
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 457 TLAIGDGANDVGMLQEADIGV 477
+A GD ND ML EA G+
Sbjct: 148 VIAAGDSYNDTTMLSEAHAGI 168
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 457 TLAIGDGANDVGMLQEADIGVG 478
T+A+GDGAND+ M ++A + +
Sbjct: 162 TVAVGDGANDISMFKKAGLKIA 183
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 457 TLAIGDGANDVGMLQEADIGVG 478
TL +GDGAND+ M + A I +
Sbjct: 161 TLVVGDGANDLSMFKHAHIKIA 182
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 4e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 457 TLAIGDGANDVGMLQEADIGVG 478
T+A+GDGAND+ M+ A +GV
Sbjct: 264 TVAVGDGANDLVMMAAAGLGVA 285
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 4e-05
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 457 TLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERLL 505
+A GDGAND+ ML+ A G+ ++ I + E LL
Sbjct: 265 IIACGDGANDLPMLEHAGTGIAWKAKPVVRE--KIHHQI-NYHGFELLL 310
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* Length = 259 | Back alignment and structure |
|---|
Score = 45.0 bits (106), Expect = 5e-05
Identities = 8/51 (15%), Positives = 22/51 (43%)
Query: 442 KALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSD 492
L + + + +GD ND+ + + D+ V + + + V+++
Sbjct: 182 ARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDPPEGVLATP 232
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 5e-05
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 457 TLAIGDGANDVGMLQEADIGVG 478
T+A+GDGAND+ ML A +G+
Sbjct: 342 TVAVGDGANDIDMLAAAGLGIA 363
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 41.5 bits (96), Expect = 2e-04
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Query: 356 ETPESKTLEKS----EDKSAAAAALKASV 380
E K L+ S D SA A A+KA++
Sbjct: 18 EKQALKKLQASLKLYADDSAPALAIKATM 46
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Query: 412 YALEDDVKDLFLELAIGCASVICCRSSPKQ-KALVTRLVKTKTSSTTLAIGDGANDVGML 470
Y + ++ + + C + K V + + IGD DV
Sbjct: 121 YCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQ-YIIMIGDSVTDVEAA 179
Query: 471 QEADIG 476
+ +D+
Sbjct: 180 KLSDLC 185
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 41.3 bits (96), Expect = 4e-04
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 21/79 (26%)
Query: 214 ADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNS 273
AD + E E+ R++ E+ ++ + +ELD E +AK
Sbjct: 77 ADRLTQE--PESIRKWREEQRKRL---------------QELDAASKVMEQEWREKAKK- 118
Query: 274 VSADREELAEEIAEKIEKN 292
D EE + +E++EKN
Sbjct: 119 ---DLEEWNQRQSEQVEKN 134
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 40.9 bits (95), Expect = 6e-04
Identities = 11/75 (14%), Positives = 31/75 (41%), Gaps = 16/75 (21%)
Query: 220 ERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADRE 279
+RL E + ++ E A ++L+E ++ +E+ + K + +R
Sbjct: 96 KRLQELDAA-SKVMEQEWREKAK----------KDLEEW-NQRQSEQVEKNKIN---NRI 140
Query: 280 ELAEEIAEKIEKNLI 294
+ ++ + ++I
Sbjct: 141 A-DKAFYQQPDADII 154
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 793 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.86 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.89 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.86 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.79 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.51 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.07 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.94 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.87 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.85 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.82 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.81 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.8 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.8 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.8 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.78 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.74 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.7 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.7 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.69 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.63 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.62 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.61 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.58 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.57 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.56 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.53 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.53 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.53 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.51 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.47 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.45 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.4 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.39 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.38 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.37 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.33 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.32 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.32 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.3 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.29 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.27 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.27 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.23 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.21 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.21 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.2 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.16 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.15 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.13 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.12 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.1 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.08 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.07 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.03 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.01 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.01 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.01 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.0 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.99 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 97.98 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.98 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.97 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.97 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.95 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.92 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.91 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.9 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.89 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.83 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.82 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.82 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.81 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.81 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.8 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.79 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.77 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.76 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.76 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.73 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.72 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.7 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.68 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.68 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.67 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.63 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.63 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.61 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.61 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.59 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.57 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.52 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.44 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.43 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.42 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.41 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.39 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.3 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.3 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.3 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.3 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.29 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.27 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.19 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.11 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.05 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.03 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.03 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.89 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.8 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.79 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.74 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.72 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 96.71 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.54 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.51 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.48 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.38 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.33 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.23 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.18 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.11 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.76 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.76 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.68 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 95.58 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 95.37 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 95.3 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.21 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 95.09 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 95.05 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 94.99 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 94.85 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 94.74 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.66 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 94.61 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.01 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 93.32 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 90.95 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 90.65 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 89.74 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 89.45 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 89.27 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 88.71 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 81.65 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 81.37 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-76 Score=726.26 Aligned_cols=614 Identities=18% Similarity=0.162 Sum_probs=468.2
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.+++++||+++++|+||++++||||||||||+|+|+|.++++++..|..+..+.
T Consensus 360 rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~------------------------ 415 (1034)
T 3ixz_A 360 RLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTED------------------------ 415 (1034)
T ss_pred HHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCccc------------------------
Confidence 45789999999999999999999999999999999999999999887664322110
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCC--ceeeecCCccHHHHHHHHHHcCCEEEeecC
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENG--KISYEAESPDEAAFVIAARELGFEFYERTQ 161 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~--~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~ 161 (793)
..+. ......+..+.+++++++||++....+++.. .-....++|+|.|+++++...|.....
T Consensus 416 -~~~~------------~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~--- 479 (1034)
T 3ixz_A 416 -QSGQ------------TFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG--- 479 (1034)
T ss_pred -cccc------------ccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHH---
Confidence 0000 0012335677899999999998765432211 112346799999999999987643221
Q ss_pred ceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcC---CCcEEEEEecCchHhHHHHhhc---------chhh
Q 003824 162 TSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE---EGTLLLLSKGADSVMFERLAEN---------GREF 229 (793)
Q Consensus 162 ~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~ 229 (793)
.+..|+++..+||+|+||||+++++.+ ++++++|+|||||.|+++|... +++.
T Consensus 480 ---------------~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~ 544 (1034)
T 3ixz_A 480 ---------------YRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQW 544 (1034)
T ss_pred ---------------HHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHH
Confidence 236788999999999999999988764 3679999999999999999752 3456
Q ss_pred HHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCCh
Q 003824 230 EEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGV 309 (793)
Q Consensus 230 ~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v 309 (793)
++.+.+.+++++.+|+|||++|+|.++++++.++... +. +..+.+|+||+|+|+++++||+|+++
T Consensus 545 ~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~----------~~-----~~~~~~e~~l~~lGlv~i~Dp~r~~~ 609 (1034)
T 3ixz_A 545 REAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAF----------DV-----EAMNFPTSGLSFAGLVSMIDPPRATV 609 (1034)
T ss_pred HHHHHHHHHHHHhcCcHhheEeEEecChhhccccccc----------ch-----hhhhccccCcEEEEEEeccCCCchhH
Confidence 7788899999999999999999999988765543211 11 11245689999999999999999999
Q ss_pred HHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhh
Q 003824 310 PECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKE 389 (793)
Q Consensus 310 ~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (793)
+++|+.|+++||+|||+|||+..||.++|+++|+..++...+ . ....+......
T Consensus 610 ~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i---------------------~-----~~~~~~~~~~~ 663 (1034)
T 3ixz_A 610 PDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETV---------------------E-----DIAARLRVPVD 663 (1034)
T ss_pred HHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHH---------------------H-----HHHHhhCccch
Confidence 999999999999999999999999999999999976432100 0 00000000000
Q ss_pred ccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhh
Q 003824 390 LLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGM 469 (793)
Q Consensus 390 ~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~m 469 (793)
..........+++|..+.....+++. +....++..+|||++|+||..+|+.+|+ .|++|+|+|||.||++|
T Consensus 664 ----~~~~~~~~~~~~~g~~l~~~~~~~l~----~~~~~~~~~v~ar~~P~~K~~iv~~lq~-~g~~V~a~GDG~ND~~m 734 (1034)
T 3ixz_A 664 ----QVNRKDARACVINGMQLKDMDPSELV----EALRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPA 734 (1034)
T ss_pred ----hccccccceeEEecHhhhhCCHHHHH----HHHHhCCceEEEecCHHHHHHHHHHHHH-cCCEEEEECCcHHhHHH
Confidence 00122344678899888766554433 3444566779999999999999999998 79999999999999999
Q ss_pred hhhcceeEEeccCCcccccccCCeeecchhh--HHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcc
Q 003824 470 LQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQP 547 (793)
Q Consensus 470 l~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~ 547 (793)
|+.||+||||+++....|+++||+++.++++ +..+ +.|||++|.|+++++.|.+++|+..+++.+++.++. ...
T Consensus 735 Lk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~ 810 (1034)
T 3ixz_A 735 LKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTG-VEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVS---VPL 810 (1034)
T ss_pred HHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhh
Confidence 9999999999645556699999999998666 6666 789999999999999999999999999999988774 234
Q ss_pred cchhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhcc-ccccchhHHHHHH-HHHHHHHHHHHHHHHHHHhc
Q 003824 548 VYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGV-QNILFSWTRILGW-ALNGVANAAIIFFFCIHAMK 625 (793)
Q Consensus 548 ~~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~f~~~~~~~~ 625 (793)
++.++|++|+|++++.+|+++++.++ ++++.|.+.|+ .+ ++.++++++++.. +..|++++++.|+.+++.+.
T Consensus 811 pl~~~qiL~inl~~d~~palal~~e~--~~~~~m~~~Pr----~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 884 (1034)
T 3ixz_A 811 PLGCITILFIELCTDIFPSVSLAYEK--AESDIMHLRPR----NPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMA 884 (1034)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCC--CChhhhhCCCC----CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 69999999999999999999999864 34444445554 44 5678998887664 45688888888777765543
Q ss_pred cccccC-------------C--------Cce-------eehhhHHHHHHHHHHHHHHHHHHHHhcc-----h--hhHHHH
Q 003824 626 QQAFRK-------------G--------GEV-------IGLEILGTTMYTCVVWVVNCQMALSVTY-----F--TYIQHL 670 (793)
Q Consensus 626 ~~~~~~-------------~--------g~~-------~~~~~~~t~~f~~~v~~~~~~~~l~~~~-----~--~~~~~~ 670 (793)
..++.. . |.. .......|++|+++++.+.+..+. .++ | ..+.|.
T Consensus 885 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~-~r~~~~s~~~~~~~~N~ 963 (1034)
T 3ixz_A 885 QEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLI-RKTRRLSAFQQGFFRNR 963 (1034)
T ss_pred hcCCccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHh-hccCCCcccccCCcccH
Confidence 211100 0 000 001235688888888877777653 332 2 236788
Q ss_pred HHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 003824 671 FIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRFFPL 739 (793)
Q Consensus 671 ~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~~p~ 739 (793)
++|+++++.+++++++.|+|+ ++. +|+..++++..|+.+++++++.++.+++.|++.|++-+.
T Consensus 964 ~l~~~~~~~~~l~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~~~ 1026 (1034)
T 3ixz_A 964 ILVIAIVFQVCIGCFLCYCPG-MPN-----IFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPGS 1026 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhhh-HHH-----HhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999985 455 788899999999999999999999999999999876443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-77 Score=729.08 Aligned_cols=618 Identities=20% Similarity=0.224 Sum_probs=452.9
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
+.+++++||+++++|+||++++||||||||||+|+|+|.++++.+..++......+. .-.+..
T Consensus 327 ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~---~~~~~~-------------- 389 (995)
T 3ar4_A 327 MAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEF---SITGST-------------- 389 (995)
T ss_dssp HHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEE---EECCSS--------------
T ss_pred hccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCccccccee---eccCCC--------------
Confidence 456899999999999999999999999999999999999999876443310000000 000000
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCcee
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI 164 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~ 164 (793)
.+-..+-..++........+.+.+++.++++||++.+..++..+.. ...+||+|.||+++|++.|+ +..+ ...+
T Consensus 390 ---~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~-~~~g~p~E~Al~~~a~~~g~-~~~~-~~~i 463 (995)
T 3ar4_A 390 ---YAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNV-FNTE-VRNL 463 (995)
T ss_dssp ---SSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCT-TCCC-CTTS
T ss_pred ---cCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCce-eecCCccHHHHHHHHHHcCC-cccc-cccc
Confidence 0000000000001111234567889999999999877544333322 23479999999999999987 2111 0000
Q ss_pred EEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCC-----cEEEEEecCchHhHHHHhhc---------chhhH
Q 003824 165 SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEG-----TLLLLSKGADSVMFERLAEN---------GREFE 230 (793)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~ 230 (793)
.............+..|++++++||+|+||||||+++.++| ++.+|+||||+.|+++|... +++.+
T Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~ 543 (995)
T 3ar4_A 464 SKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVK 543 (995)
T ss_dssp CTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHH
T ss_pred ccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHH
Confidence 00000000000123579999999999999999999998766 68999999999999999753 23456
Q ss_pred HHHHHHHHHH--HhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCC
Q 003824 231 EQTKEHINEY--ADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNG 308 (793)
Q Consensus 231 ~~~~~~~~~~--~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~ 308 (793)
+.+.++++++ +.+|+|||++|||+++..+. ...+ .+ ...++.+|+|++|+|+++++|++|++
T Consensus 544 ~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~----------~~~~-~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~ 607 (995)
T 3ar4_A 544 EKILSVIKEWGTGRDTLRCLALATRDTPPKRE----------EMVL-DD-----SSRFMEYETDLTFVGVVGMLDPPRKE 607 (995)
T ss_dssp HHHHHHHHHHHHSTTCCEEEEEEEESSCCCGG----------GCCT-TC-----GGGHHHHTCSEEEEEEEEEECCBCTT
T ss_pred HHHHHHHHHHHhhhccceEEEEEEEecCcccc----------cccc-cc-----chhhhhhccCcEEEEEEeecCCCchh
Confidence 7788899999 99999999999999864210 0001 01 11346789999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhh
Q 003824 309 VPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGK 388 (793)
Q Consensus 309 v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (793)
++++|+.|+++||++||+|||+..||.++|+++||...+..+ .
T Consensus 608 ~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i---~---------------------------------- 650 (995)
T 3ar4_A 608 VMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV---A---------------------------------- 650 (995)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCC---T----------------------------------
T ss_pred HHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcc---c----------------------------------
Confidence 999999999999999999999999999999999997643210 0
Q ss_pred hccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChh
Q 003824 389 ELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVG 468 (793)
Q Consensus 389 ~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ 468 (793)
..+++|+.+..+.++++.+.+ . +..+|||++|+||..+|+.+|+ .|+.|+|+|||.||++
T Consensus 651 -------------~~~~~g~~~~~l~~~~~~~~~----~--~~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~~ 710 (995)
T 3ar4_A 651 -------------DRAYTGREFDDLPLAEQREAC----R--RACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAP 710 (995)
T ss_dssp -------------TTEEEHHHHHTSCHHHHHHHH----H--HCCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGHH
T ss_pred -------------ceEEEchhhhhCCHHHHHHHH----h--hCcEEEEeCHHHHHHHHHHHHH-CCCEEEEEcCCchhHH
Confidence 015666666544433333322 2 3469999999999999999998 6999999999999999
Q ss_pred hhhhcceeEEeccCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCc
Q 003824 469 MLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQ 546 (793)
Q Consensus 469 ml~~AdvGI~i~g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~ 546 (793)
||++||+||+|+ +....|+++||+++.+ |..+.++ +.|||++|.|+++++.|.+++|+..+++.+++.++. + .
T Consensus 711 alk~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~-i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g-~--~ 785 (995)
T 3ar4_A 711 ALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAA-VEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG-L--P 785 (995)
T ss_dssp HHHHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-C--C
T ss_pred HHHHCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C--c
Confidence 999999999995 3223388999999976 6668888 899999999999999999999999998888887763 2 2
Q ss_pred ccchhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhc-
Q 003824 547 PVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMK- 625 (793)
Q Consensus 547 ~~~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~- 625 (793)
.++.++|++|+|++++.+|++++++++. +++.+.++|+ .++++++++++++.|++.|+++++++++.+++.+.
T Consensus 786 ~pl~~~qil~~nl~~d~~p~l~l~~~~~--~~~~m~~~P~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 859 (995)
T 3ar4_A 786 EALIPVQLLWVNLVTDGLPATALGFNPP--DLDIMDRPPR----SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMY 859 (995)
T ss_dssp CSSCHHHHHHHHHTTTHHHHHHHTTCCC--CTTGGGSCCC----CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSS
T ss_pred chHHHHHHHHHHHHHHHHHHHhhccCCC--ChhHHhCCCC----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4689999999999999999999998764 3455666665 56778999999999999999999988765544321
Q ss_pred cc-c--c---c--------CCCcee--------ehhhHHHHHHHHHHHHHHHHHHHHhcc-------hhhHHHHHHHHHH
Q 003824 626 QQ-A--F---R--------KGGEVI--------GLEILGTTMYTCVVWVVNCQMALSVTY-------FTYIQHLFIWGGI 676 (793)
Q Consensus 626 ~~-~--~---~--------~~g~~~--------~~~~~~t~~f~~~v~~~~~~~~l~~~~-------~~~~~~~~i~~si 676 (793)
.. . . . .++... ......|++|+++++++.++.+. .++ ...+.|.++++++
T Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~-~r~~~~~~~~~~~~~n~~l~~~~ 938 (995)
T 3ar4_A 860 AEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALN-SLSENQSLMRMPPWVNIWLLGSI 938 (995)
T ss_dssp CSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHT-TSCSSCCTTTSCGGGCHHHHHHH
T ss_pred cccccccccchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHH-hhccccchhccCCccCHHHHHHH
Confidence 10 0 0 0 000000 11246789999998888777653 221 1235677788888
Q ss_pred HHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003824 677 TFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRF 736 (793)
Q Consensus 677 ~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~ 736 (793)
++.+++++++.++|+ ++. +|+..++++.+|+.+++++++.++++++.|+++|.|
T Consensus 939 ~~~~~l~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 939 CLSMSLHFLILYVDP-LPM-----IFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp HHHHHHHHHHHHSTH-HHH-----HTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHH-HHH-----hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 888888888888884 343 677889999999999999999999999999998865
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-75 Score=714.53 Aligned_cols=612 Identities=19% Similarity=0.197 Sum_probs=459.0
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
+.+++++||+++++|+||++++||||||||||+|+|+|.++++++..|.....+.
T Consensus 356 mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~------------------------- 410 (1028)
T 2zxe_A 356 MARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEN------------------------- 410 (1028)
T ss_dssp HHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTT-------------------------
T ss_pred HhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCC-------------------------
Confidence 4678999999999999999999999999999999999999999887664321100
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCC--ceeeecCCccHHHHHHHHHHcCCEEEeecCc
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENG--KISYEAESPDEAAFVIAARELGFEFYERTQT 162 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~--~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~ 162 (793)
..+.. .....+..++++.++++||++..+.+.+.. .-.+..+||+|.||+++|++.|.....
T Consensus 411 ~~~~~------------~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~---- 474 (1028)
T 2zxe_A 411 QSGAA------------FDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQG---- 474 (1028)
T ss_dssp CCSCC------------CCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHH----
T ss_pred ccccc------------cccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHH----
Confidence 00000 011234567889999999999875432111 111235799999999999886432110
Q ss_pred eeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcC---CCcEEEEEecCchHhHHHHhhc---------chhhH
Q 003824 163 SISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE---EGTLLLLSKGADSVMFERLAEN---------GREFE 230 (793)
Q Consensus 163 ~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~ 230 (793)
.+..|+++..+||+|+||||+++++.+ ++++++|+||||+.|+++|... +++.+
T Consensus 475 --------------~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~ 540 (1028)
T 2zxe_A 475 --------------MRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMK 540 (1028)
T ss_dssp --------------HHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHH
T ss_pred --------------HHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHH
Confidence 125688999999999999999999974 5788999999999999999752 23456
Q ss_pred HHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChH
Q 003824 231 EQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVP 310 (793)
Q Consensus 231 ~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~ 310 (793)
+.+.+++++++.+|+|||++|+|.++++++.++. .. +++ ..+.+|+|++|+|+++++||+|++++
T Consensus 541 ~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~--------~~--~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~ 605 (1028)
T 2zxe_A 541 EAFQNAYLELGGLGERVLGFCHFALPEDKYNEGY--------PF--DAD-----EPNFPTTDLCFVGLMAMIDPPRAAVP 605 (1028)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTC--------CC--CTT-----TTCSCCSSEEEEEEEEEECCBCTTHH
T ss_pred HHHHHHHHHHHhcCCEEEEEEEEecCcccccccc--------cc--chh-----hhhhhhcCeEEEeeeccCCCCChhHH
Confidence 7788999999999999999999999765432110 00 110 01235789999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhc
Q 003824 311 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 390 (793)
Q Consensus 311 ~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (793)
++|+.|+++||++||+|||+..||.++|++|||..++...+ . +...+.......
T Consensus 606 ~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i------------------~--------~~~~~~~~~~~~ 659 (1028)
T 2zxe_A 606 DAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETI------------------E--------DIAARLNIPIGQ 659 (1028)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCH------------------H--------HHHHHTTCCGGG
T ss_pred HHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhH------------------H--------HHHhhcCcchhh
Confidence 99999999999999999999999999999999976543210 0 000000000000
Q ss_pred cccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhh
Q 003824 391 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 470 (793)
Q Consensus 391 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml 470 (793)
. ........+++|+.+..+.++++ .++...++.++|||++|+||..+|+.+|+ .|++|+|+|||.||+|||
T Consensus 660 ~----~~~~~~~~vi~G~~l~~~~~~~l----~~~~~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~paL 730 (1028)
T 2zxe_A 660 V----NPRDAKACVVHGSDLKDLSTEVL----DDILHYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPAL 730 (1028)
T ss_dssp S----CGGGCCEEEEEHHHHTTCCHHHH----HHHHHHCSEEEEESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHHH
T ss_pred c----cccccceEEEEcHHhhhCCHHHH----HHHHhhCCcEEEEEcCHHHHHHHHHHHHh-CCCEEEEEcCCcchHHHH
Confidence 0 11123467899998876654433 34445667789999999999999999998 789999999999999999
Q ss_pred hhcceeEEeccCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCccc
Q 003824 471 QEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPV 548 (793)
Q Consensus 471 ~~AdvGI~i~g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~ 548 (793)
++|||||+|+.+....|+++||+++.+ |..+.++ +.|||++|.|+++++.|.+++|+..+++.+++.++. ...+
T Consensus 731 k~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~-i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~---~~~~ 806 (1028)
T 2zxe_A 731 KKADIGVAMGISGSDVSKQAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGN---VPLP 806 (1028)
T ss_dssp HHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHH-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHC---CCCS
T ss_pred HhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---ccch
Confidence 999999999633333389999999987 6668888 899999999999999999999999998888887763 2345
Q ss_pred chhHHHHHHHHhhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHH-HHHHHHHHHHHHHHHHHHHhccc
Q 003824 549 YNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILG-WALNGVANAAIIFFFCIHAMKQQ 627 (793)
Q Consensus 549 ~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~-~~~~~~~~~~~~f~~~~~~~~~~ 627 (793)
++++|++|+|++++.+|+++++.++ +.++.+.++|+ ..+.++++++++++. |+..|++++++.|+.+++.+...
T Consensus 807 l~~~qil~inl~~d~~pa~al~~e~--~~~~~m~~~Pr---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 881 (1028)
T 2zxe_A 807 LGTVTILCIDLGTDMVPAISLAYEQ--AESDIMKRQPR---NPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAEN 881 (1028)
T ss_dssp SCHHHHHHHHTTTTHHHHHHGGGCC--CSSCGGGSCCC---CTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCc--cchhhhccCCC---CcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8999999999999999999998654 34445555564 123348999998776 56889999999887766543211
Q ss_pred cc-------------cC--------CCcee-------ehhhHHHHHHHHHHHHHHHHHHH-Hhcchhh----HHHHHHHH
Q 003824 628 AF-------------RK--------GGEVI-------GLEILGTTMYTCVVWVVNCQMAL-SVTYFTY----IQHLFIWG 674 (793)
Q Consensus 628 ~~-------------~~--------~g~~~-------~~~~~~t~~f~~~v~~~~~~~~l-~~~~~~~----~~~~~i~~ 674 (793)
++ .. .|... ......|++|+++++.+.+..+. .++..++ +.|.++++
T Consensus 882 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~ 961 (1028)
T 2zxe_A 882 GFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIF 961 (1028)
T ss_dssp TCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHH
T ss_pred CcccchhhcccchhccccccccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHH
Confidence 11 00 01111 01256899999999988887763 2222222 34678888
Q ss_pred HHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003824 675 GITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLLPYFTYSAIQMRF 736 (793)
Q Consensus 675 si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~~~~~~ll~~~i~k~~~~~~ 736 (793)
++++.+++++++.++|+ ++. +|+..++++..|+.++.++++.++..++.|++.|.+
T Consensus 962 ~~~~~~~l~~~~~~~p~-~~~-----~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 962 GLFEETALAAFLSYCPG-TDV-----ALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp HHHHHHHHHHHHHHSTT-HHH-----HTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhh-HHh-----hhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 88888988888889985 344 677889999999999999999999999999987765
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-67 Score=622.21 Aligned_cols=520 Identities=18% Similarity=0.192 Sum_probs=380.2
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
+.++++++|+++++|+||++++||||||||||+|+|+|.+++..+. +.
T Consensus 353 mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~~------------------------------- 400 (920)
T 1mhs_A 353 LAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-VD------------------------------- 400 (920)
T ss_dssp HHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-CC-------------------------------
T ss_pred HHhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-CC-------------------------------
Confidence 4568999999999999999999999999999999999987643210 00
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCcee
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI 164 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~ 164 (793)
+ .+++.+.++|+.... .++||+|.|+++++++.+...
T Consensus 401 -------------------~-----~~ll~~a~l~~~~~~-----------~~~~P~e~Al~~~~~~~~~~~-------- 437 (920)
T 1mhs_A 401 -------------------P-----EDLMLTACLAASRKK-----------KGIDAIDKAFLKSLKYYPRAK-------- 437 (920)
T ss_dssp -------------------C-----THHHHHHHHSCCCSS-----------CSCCSHHHHHHHHHHHSSSCC--------
T ss_pred -------------------H-----HHHHHHHHHhcCCcc-----------cCCChHHHHHHHHHHhcccch--------
Confidence 0 134567778876421 124999999999998765310
Q ss_pred EEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhc---chhhHHHHHHHHHHHH
Q 003824 165 SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---GREFEEQTKEHINEYA 241 (793)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---~~~~~~~~~~~~~~~~ 241 (793)
.....|++++.+||+|.||||+++++.++|+.++|+||||+.|+++|... +++.++.+.+.+++++
T Consensus 438 -----------~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a 506 (920)
T 1mhs_A 438 -----------SVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFA 506 (920)
T ss_dssp -----------GGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHH
T ss_pred -----------hhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHH
Confidence 01246888999999999999999999888888999999999999999752 3345677888999999
Q ss_pred hccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCC
Q 003824 242 DAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGI 321 (793)
Q Consensus 242 ~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agI 321 (793)
.+|+|||++|+|.. |++++|+|+++++||+|++++++|+.|+++||
T Consensus 507 ~~G~RvL~vA~~~~----------------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI 552 (920)
T 1mhs_A 507 TRGFRSLGVARKRG----------------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGL 552 (920)
T ss_dssp TSSCCCCEECCCSS----------------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTC
T ss_pred hCCCEEEEEEEecc----------------------------------ccccEEEEEEEEeccccccHHHHHHHHhhcCc
Confidence 99999999998631 37899999999999999999999999999999
Q ss_pred eEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCe
Q 003824 322 KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPL 401 (793)
Q Consensus 322 kv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (793)
++||+|||+..||.+||+++||..+. ++.+.
T Consensus 553 ~v~MiTGD~~~TA~aIA~~lGI~~~~-----~~~~~-------------------------------------------- 583 (920)
T 1mhs_A 553 SIKMLTGDAVGIARETSRQLGLGTNI-----YNAER-------------------------------------------- 583 (920)
T ss_dssp EEEEEESSCHHHHHHHHHHHTSSCSC-----CCSSS--------------------------------------------
T ss_pred eEEEEcCCCHHHHHHHHHHcCCCccc-----cCccc--------------------------------------------
Confidence 99999999999999999999996421 00000
Q ss_pred EEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEecc
Q 003824 402 ALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISG 481 (793)
Q Consensus 402 ~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g 481 (793)
++++|. ..+.++++.+. . .+..+|+|++|+||..+|+.+|+ .|++|+|+|||.||+|||++|||||+|++
T Consensus 584 -~~~~g~--~~~~~~el~~~----~--~~~~V~arv~P~~K~~iV~~Lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~ 653 (920)
T 1mhs_A 584 -LGLGGG--GDMPGSEVYDF----V--EAADGFAEVFPQHKYNVVEILQQ-RGYLVAMTGDGVNDAPSLKKADTGIAVEG 653 (920)
T ss_dssp -SSSCBC--CCGGGGGGGTT----T--TTTSCEESCCSTHHHHHHHHHHT-TTCCCEECCCCGGGHHHHHHSSEEEEETT
T ss_pred -eeecCc--ccCCHHHHHHH----H--hhCeEEEEeCHHHHHHHHHHHHh-CCCeEEEEcCCcccHHHHHhCCcCccccc
Confidence 011111 00011111111 1 12349999999999999999998 69999999999999999999999999964
Q ss_pred CCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHHHHHH
Q 003824 482 VEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNV 559 (793)
Q Consensus 482 ~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~ 559 (793)
....|+++||+++.+ |..+.++ +.+||++|+|+++++.|.++.|+.+....+++..+. |.+ +++.+++|.|+
T Consensus 654 -gtd~ak~aADiVl~~~~~~~I~~a-i~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~---~~~-l~~~~il~~~l 727 (920)
T 1mhs_A 654 -SSDAARSAADIVFLAPGLGAIIDA-LKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAIL---NRS-LNIELVVFIAI 727 (920)
T ss_dssp -SCHHHHHSSSEEESSCCSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---SCC-CCHHHHHHHHH
T ss_pred -ccHHHHHhcCeEEcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcc-CCHHHHHHHHH
Confidence 233488999999987 5558888 899999999999999999999998754443333333 334 67788888898
Q ss_pred hhccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCceeehh
Q 003824 560 FFTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRKGGEVIGLE 639 (793)
Q Consensus 560 ~~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~g~~~~~~ 639 (793)
+.+. |++++++++.+++ +.|+- ++. ...+...++.|++.++..++.+++.+... ...+......
T Consensus 728 ~~d~-~~lal~~e~~~~~-----~~P~~----~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 791 (920)
T 1mhs_A 728 FADV-ATLAIAYDNAPYS-----QTPVK----WNL----PKLWGMSVLLGVVLAVGTWITVTTMYAQG--ENGGIVQNFG 791 (920)
T ss_dssp HHTT-HHHHCCCCCSGGG-----GSCCC----CCS----SSCSSCHHHHHHHHHHHHHHHHHHHTTTT--TTCCSSSSSS
T ss_pred HHHH-HhhhhcccCcccc-----cCCCC----chH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccccccchhh
Confidence 8885 9999988764321 34431 111 22233345667777776665554433210 0111111122
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcc----hhhHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHH
Q 003824 640 ILGTTMYTCVVWVVNCQMALSVTY----FTYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLIT 715 (793)
Q Consensus 640 ~~~t~~f~~~v~~~~~~~~l~~~~----~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~ 715 (793)
...|++|+++++.+.+..+ .+++ |..+.+.++++++++..++++++.++| +|.+.++++..|+.+
T Consensus 792 ~~~T~~f~~lv~~~~~~~~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~f~~~~l~~~~~~~~ 860 (920)
T 1mhs_A 792 NMDEVLFLQISLTENWLIF-ITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG----------WFEHSDTSIVAVVRI 860 (920)
T ss_dssp SHHHHHHHHHHHHHHHHTT-SSSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHSSS----------STTSCSHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-HhccchhhhcCchHHHHHHHHHHHHHHHHHHHHhh----------hhccCCCCHHHHHHH
Confidence 4789999999999887765 2222 222345566666666666666666665 223456788889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 003824 716 LLVLMSSLLPYFTYSAIQMRF 736 (793)
Q Consensus 716 l~~~~~~ll~~~i~k~~~~~~ 736 (793)
++++++.++...+.|++.+..
T Consensus 861 ~~~~~~~~~~~e~~k~~~~~~ 881 (920)
T 1mhs_A 861 WIFSFGIFCIMGGVYYILQDS 881 (920)
T ss_dssp HHHTTHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 988888888888888765543
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-65 Score=611.05 Aligned_cols=531 Identities=17% Similarity=0.193 Sum_probs=367.2
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
++.+++++||+++++|+||++++||||||||||+|+|+|.++.+. .++.+
T Consensus 303 r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~~---------------------------- 352 (885)
T 3b8c_A 303 RLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCKG---------------------------- 352 (885)
T ss_dssp HHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCSS----------------------------
T ss_pred HHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccCCC----------------------------
Confidence 356899999999999999999999999999999999999643210 01000
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
...++++...++|+... ++||.|.|+++++.+..
T Consensus 353 -----------------------~~~~~ll~~aa~~~~~~-------------~~~p~~~Al~~~~~~~~---------- 386 (885)
T 3b8c_A 353 -----------------------VEKDQVLLFAAMASRVE-------------NQDAIDAAMVGMLADPK---------- 386 (885)
T ss_dssp -----------------------TTHHHHHHHHHHHCCSS-------------SCCSHHHHHHHTTCCTT----------
T ss_pred -----------------------CCHHHHHHHHHHHhCCC-------------CCCchHHHHHHHhhchh----------
Confidence 01235677788897641 36999999998764310
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhc
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADA 243 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (793)
. .+..|++++.+||+|.||||+++++.++|+.++|+||||+.|+++|... .+.++.+.+.+++++.+
T Consensus 387 -------~-----~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~~~~~~~~a~~ 453 (885)
T 3b8c_A 387 -------E-----ARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKAS-NDLSKKVLSIIDKYAER 453 (885)
T ss_dssp -------C-----CCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCC-STTTTTHHHHHHHHTTT
T ss_pred -------h-----HhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCc-hhhHHHHHHHHHHHHhC
Confidence 0 1245778889999999999999998878888899999999999998642 23455677889999999
Q ss_pred cceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeE
Q 003824 244 GLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKL 323 (793)
Q Consensus 244 G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv 323 (793)
|+||+++|+|++++++. +..|++++|+|+++++||+|++++++|+.|+++||++
T Consensus 454 G~rvl~vA~~~~~~~~~--------------------------~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v 507 (885)
T 3b8c_A 454 GLRSLAVARQVVPEKTK--------------------------ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNV 507 (885)
T ss_dssp TCEEEEECCBCCCSSSS--------------------------SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCC
T ss_pred CCeEEEEEEeccccccc--------------------------cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcE
Confidence 99999999998865320 2357899999999999999999999999999999999
Q ss_pred EEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEE
Q 003824 324 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 403 (793)
Q Consensus 324 ~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 403 (793)
||+|||+..||.++|+++||..+.. +..
T Consensus 508 ~MiTGD~~~tA~~iA~~lGi~~~~~-----~~~----------------------------------------------- 535 (885)
T 3b8c_A 508 KMITGDQLAIGKETGRRLGMGTNMY-----PSS----------------------------------------------- 535 (885)
T ss_dssp EEEESSCHHHHTHHHHTTTCTTCCS-----TTS-----------------------------------------------
T ss_pred EEEcCCChHHHHHHHHHhCCccccC-----Ccc-----------------------------------------------
Confidence 9999999999999999999964210 000
Q ss_pred EEeCchhhHhhh-hhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccC
Q 003824 404 IIDGKSLTYALE-DDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGV 482 (793)
Q Consensus 404 vi~G~~l~~~~~-~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~ 482 (793)
+++|..++..+. .++.+ +.. +..+|+|++|+||..+|+.+|+ .|+.|+|+|||.||+|||++|||||+|++
T Consensus 536 ~l~g~~~~~~~~~~~l~~----~~~--~~~v~arv~P~~K~~iV~~lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~- 607 (885)
T 3b8c_A 536 ALLGTHKDANLASIPVEE----LIE--KADGFAGVFPEHKYEIVKKLQE-RKHIVGMTGDGVNDAPALKKADIGIAVAD- 607 (885)
T ss_dssp SCCBGGGGTTSCCSCHHH----HHH--TSCCEECCCHHHHHHHHHHHHH-TTCCCCBCCCSSTTHHHHHHSSSCCCCSS-
T ss_pred eeeccccccccchhHHHH----HHh--hCcEEEEECHHHHHHHHHHHHH-CCCeEEEEcCCchhHHHHHhCCEeEEeCC-
Confidence 111222211011 11111 112 2349999999999999999998 79999999999999999999999999963
Q ss_pred CcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHHHHHHh
Q 003824 483 EGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVF 560 (793)
Q Consensus 483 ~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~ 560 (793)
....|+++||+++.+ |..+..+ +.+||.+|+|+++++.|.++.|+..++..++..+ ++. .++++++++|+|++
T Consensus 608 gtd~ak~aADivl~~~~~~~I~~a-i~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~--~~~--~~l~p~~il~i~l~ 682 (885)
T 3b8c_A 608 ATDAARGASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIAL--IWE--FDFSAFMVLIIAIL 682 (885)
T ss_dssp SHHHHGGGCSSCCSSCSHHHHTHH-HHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHS--SCS--SCSCHHHHHHHHHH
T ss_pred ccHHHHHhcceeeccCchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--ccC--cCcCHHHHHHHHHH
Confidence 233488999999988 4447777 8999999999999999999999875554444433 222 35889999999999
Q ss_pred hccccceeeecccCCCChHHhhhcchhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CCce-e--
Q 003824 561 FTSLPVIALGVFDQDVSARFCLKFPLLYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFRK-GGEV-I-- 636 (793)
Q Consensus 561 ~~~lp~l~l~~~~~~~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~-~g~~-~-- 636 (793)
.+..| ++++..+.++ |+ .++...+ ...+..+++.|++++++.++++++.+....+.. -|.. .
T Consensus 683 ~d~~~-l~l~~~~~~~--------~~----~p~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (885)
T 3b8c_A 683 NDGTI-MTISKDRVKP--------SP----TPDSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRD 748 (885)
T ss_dssp HHTTT-CCCCCCCCCC--------SS----CCCSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGG
T ss_pred HHHHH-HhhcccccCc--------cc----CCcchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccCcccccc
Confidence 98776 7776543221 11 1222222 445566678888888887765544332111100 0100 0
Q ss_pred ehhhHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHH---HHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHH
Q 003824 637 GLEILGTTMYTCVVWVVNCQMALSVTY--FTYIQHL---FIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSF 711 (793)
Q Consensus 637 ~~~~~~t~~f~~~v~~~~~~~~l~~~~--~~~~~~~---~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~ 711 (793)
....+.+++|+..++...+. .+.+++ ++|+.+. .++..++..++.+++..+.+. . ++...++++..
T Consensus 749 ~~~~~~t~~~~~~~~~~~~~-~~~~Rs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~~l~~~~ 819 (885)
T 3b8c_A 749 NNHELMGAVYLQVSIISQAL-IFVTRSRSWSFVERPGALLMIAFLIAQLIATLIAVYANW---E-----FAKIRGIGWGW 819 (885)
T ss_dssp GTHHHHTTTTTTTSSTTGGG-TTCSSSCTTTSTTSTTTTTSGGGSSTTTTTTSSSSSCCC---C-----SSCCCCCTTTT
T ss_pred hHHHHHHHHHHHHHHHHHHH-HHHhccCCCCcccCccHHHHHHHHHHHHHHHHHHHhccc---c-----ccccCCchHHH
Confidence 01234344444333333332 344433 3333322 222222222222222222211 1 22356788889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Q 003824 712 WLITLLVLMSSLLPYFTYSAIQMRFF 737 (793)
Q Consensus 712 wl~~l~~~~~~ll~~~i~k~~~~~~~ 737 (793)
|+.+++.+++.+++.++.|++.|+..
T Consensus 820 ~~~~~~~~~~~~~~~e~~k~~~~~~~ 845 (885)
T 3b8c_A 820 AGVIWLYSIVTYFPLDVFKFAIRYIL 845 (885)
T ss_dssp HHHHHHHTGGGTHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99888888888899999998876543
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-41 Score=395.46 Aligned_cols=293 Identities=23% Similarity=0.290 Sum_probs=236.6
Q ss_pred CCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccccc
Q 003824 6 TDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASI 85 (793)
Q Consensus 6 ~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (793)
.++++++|+++++|+||++|+||||||||||+|+|+|.++..++.. +
T Consensus 402 a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~------~--------------------------- 448 (736)
T 3rfu_A 402 AQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDFV------E--------------------------- 448 (736)
T ss_dssp HHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSSC------H---------------------------
T ss_pred hhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCCC------H---------------------------
Confidence 4689999999999999999999999999999999999998733210 0
Q ss_pred CCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeE
Q 003824 86 KGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSIS 165 (793)
Q Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~ 165 (793)
.+++...+.+ ++.++||++.|++++|++.|+.+..
T Consensus 449 ------------------------~~~l~~aa~l--------------e~~s~hPla~Aiv~~a~~~~~~~~~------- 483 (736)
T 3rfu_A 449 ------------------------DNALALAAAL--------------EHQSEHPLANAIVHAAKEKGLSLGS------- 483 (736)
T ss_dssp ------------------------HHHHHHHHHH--------------HHSSCCHHHHHHHHHHHTTCCCCCC-------
T ss_pred ------------------------HHHHHHHHHH--------------hhcCCChHHHHHHHHHHhcCCCccC-------
Confidence 1122222211 1235799999999999987754321
Q ss_pred EEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhccc
Q 003824 166 VHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGL 245 (793)
Q Consensus 166 i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~ 245 (793)
..+|++.+++... ... +|+ .+.+|+++.+.+.... .....+.+++++.+|+
T Consensus 484 --------------------~~~f~~~~g~gv~-~~~-~g~--~~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~~G~ 534 (736)
T 3rfu_A 484 --------------------VEAFEAPTGKGVV-GQV-DGH--HVAIGNARLMQEHGGD-----NAPLFEKADELRGKGA 534 (736)
T ss_dssp --------------------CSCCCCCTTTEEE-ECS-SSS--CEEEESHHHHHHHCCC-----CHHHHHHHHHHHHTTC
T ss_pred --------------------cccccccCCceEE-EEE-CCE--EEEEcCHHHHHHcCCC-----hhHHHHHHHHHHhcCC
Confidence 2356666665432 222 343 2456999877553221 2346677889999999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEEE
Q 003824 246 RTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWV 325 (793)
Q Consensus 246 r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~m 325 (793)
|++++| .|.+++|+++++|++|++++++|+.|+++||+++|
T Consensus 535 ~vl~va---------------------------------------~d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~m 575 (736)
T 3rfu_A 535 SVMFMA---------------------------------------VDGKTVALLVVEDPIKSSTPETILELQQSGIEIVM 575 (736)
T ss_dssp EEEEEE---------------------------------------ETTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEE
T ss_pred eEEEEE---------------------------------------ECCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEE
Confidence 999999 46689999999999999999999999999999999
Q ss_pred EeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEEE
Q 003824 326 LTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALII 405 (793)
Q Consensus 326 lTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 405 (793)
+|||+..+|..+|+++|+..
T Consensus 576 lTGd~~~~a~~ia~~lgi~~------------------------------------------------------------ 595 (736)
T 3rfu_A 576 LTGDSKRTAEAVAGTLGIKK------------------------------------------------------------ 595 (736)
T ss_dssp ECSSCHHHHHHHHHHHTCCC------------------------------------------------------------
T ss_pred ECCCCHHHHHHHHHHcCCCE------------------------------------------------------------
Confidence 99999999999999999731
Q ss_pred eCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCcc
Q 003824 406 DGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGM 485 (793)
Q Consensus 406 ~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~ 485 (793)
++++++|++|..+|+.+++ .++.|+|+|||.||++||++||+||+|++ ...
T Consensus 596 ---------------------------v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~AdvGIAmg~-g~d 646 (736)
T 3rfu_A 596 ---------------------------VVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADIGIAMGT-GTD 646 (736)
T ss_dssp ---------------------------EECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSEEEEESS-SCS
T ss_pred ---------------------------EEEecCHHHHHHHHHHHHh-cCCEEEEEECChHhHHHHHhCCEEEEeCC-ccH
Confidence 8999999999999999998 78999999999999999999999999954 334
Q ss_pred cccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHH
Q 003824 486 QAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL 534 (793)
Q Consensus 486 ~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~ 534 (793)
.++++||+++.+ +..+.++ +.+||..++|+++.+.|.|.+|++.+.+.
T Consensus 647 ~a~~~AD~vl~~~~~~~i~~a-i~~sr~t~~~i~qnl~~a~~yN~~~iplA 696 (736)
T 3rfu_A 647 VAIESAGVTLLHGDLRGIAKA-RRLSESTMSNIRQNLFFAFIYNVLGVPLA 696 (736)
T ss_dssp HHHHHCSEEECSCCSTTHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 489999999976 5558888 89999999999999999999998765443
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=389.30 Aligned_cols=290 Identities=23% Similarity=0.281 Sum_probs=232.3
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
..++++++|+++++|+||++++||||||||||+|+|+|.++...+..
T Consensus 385 ~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~--------------------------------- 431 (723)
T 3j09_A 385 GAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD--------------------------------- 431 (723)
T ss_dssp HHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC---------------------------------
T ss_pred HHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC---------------------------------
Confidence 35789999999999999999999999999999999999999765310
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCcee
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI 164 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~ 164 (793)
..+++...+.|.. .++||++.|+++++++.|+.+...
T Consensus 432 ------------------------~~~~l~~aa~~e~--------------~s~hP~~~Ai~~~a~~~~~~~~~~----- 468 (723)
T 3j09_A 432 ------------------------ERELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEP----- 468 (723)
T ss_dssp ------------------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSC-----
T ss_pred ------------------------HHHHHHHHHHHhc--------------cCCCchhHHHHHHHHhcCCCcCCc-----
Confidence 1233444444421 257999999999999988754321
Q ss_pred EEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhcc
Q 003824 165 SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAG 244 (793)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 244 (793)
..++. .+ .+.... ..+.+|+++.+.+. +....+.+.+.+++++.+|
T Consensus 469 --------------~~~~~---~~----g~g~~~---------~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~g 514 (723)
T 3j09_A 469 --------------EKVEV---IA----GEGVVA---------DGILVGNKRLMEDF----GVAVSNEVELALEKLEREA 514 (723)
T ss_dssp --------------CCCEE---ET----TTEEEE---------TTEEEECHHHHHHT----TCCCCHHHHHHHHHHHTTT
T ss_pred --------------cceEE---ec----CCceEE---------EEEEECCHHHHHhc----CCCccHHHHHHHHHHHhcC
Confidence 11110 00 000000 12456887765432 1223456778889999999
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEE
Q 003824 245 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 324 (793)
Q Consensus 245 ~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~ 324 (793)
+|++++| .|++++|+++++|++|++++++|+.|+++||++|
T Consensus 515 ~~~~~va---------------------------------------~~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~ 555 (723)
T 3j09_A 515 KTAVIVA---------------------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVG 555 (723)
T ss_dssp CEEEEEE---------------------------------------ETTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEE
T ss_pred CeEEEEE---------------------------------------ECCEEEEEEeecCCcchhHHHHHHHHHHCCCEEE
Confidence 9999999 4779999999999999999999999999999999
Q ss_pred EEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEE
Q 003824 325 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALI 404 (793)
Q Consensus 325 mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 404 (793)
|+|||+..+|..+|+++|+.
T Consensus 556 ~~TGd~~~~a~~ia~~lgi~------------------------------------------------------------ 575 (723)
T 3j09_A 556 MITGDNWRSAEAISRELNLD------------------------------------------------------------ 575 (723)
T ss_dssp EECSSCHHHHHHHHHHHTCS------------------------------------------------------------
T ss_pred EECCCCHHHHHHHHHHcCCc------------------------------------------------------------
Confidence 99999999999999999973
Q ss_pred EeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCc
Q 003824 405 IDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG 484 (793)
Q Consensus 405 i~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~ 484 (793)
.++++++|+||..+++.+++ . +.|+|+|||.||++||+.||+||+|++ ..
T Consensus 576 ---------------------------~~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~-g~ 625 (723)
T 3j09_A 576 ---------------------------LVIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGS-GS 625 (723)
T ss_dssp ---------------------------EEECSCCTTCHHHHHHHHTT-T-CCEEEEECSSTTHHHHHHSSEEEECCC-CS
T ss_pred ---------------------------EEEccCCHHHHHHHHHHHhc-C-CeEEEEECChhhHHHHhhCCEEEEeCC-Cc
Confidence 18999999999999999998 4 899999999999999999999999953 33
Q ss_pred ccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHHH
Q 003824 485 MQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTL 534 (793)
Q Consensus 485 ~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~~ 534 (793)
..++++||+++.+ ++.+.++ +.+||+.++|+++.+.|.+++|++.+.+.
T Consensus 626 ~~a~~~AD~vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~n~~~i~~a 676 (723)
T 3j09_A 626 DVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVILIPAA 676 (723)
T ss_dssp CCSSCCSSEECSSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4489999999965 6668888 88999999999999999999999854443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-40 Score=383.50 Aligned_cols=289 Identities=23% Similarity=0.275 Sum_probs=232.1
Q ss_pred CCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccc
Q 003824 5 ETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKAS 84 (793)
Q Consensus 5 ~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (793)
..++++++|+++++|+||++++||||||||||+|+|+|.++...+..
T Consensus 307 ~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~--------------------------------- 353 (645)
T 3j08_A 307 GAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD--------------------------------- 353 (645)
T ss_dssp HHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC---------------------------------
T ss_pred HHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC---------------------------------
Confidence 35789999999999999999999999999999999999999765310
Q ss_pred cCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCcee
Q 003824 85 IKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSI 164 (793)
Q Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~ 164 (793)
.++++...+.|.. .++||++.|+++++++.|+.+...
T Consensus 354 ------------------------~~~~l~~aa~~e~--------------~s~hPla~Aiv~~a~~~g~~~~~~----- 390 (645)
T 3j08_A 354 ------------------------ERELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEP----- 390 (645)
T ss_dssp ------------------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSC-----
T ss_pred ------------------------HHHHHHHHHHHhh--------------cCCChhHHHHHHHHHhcCCCcCCc-----
Confidence 1234444554422 256999999999999988754321
Q ss_pred EEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhcc
Q 003824 165 SVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAG 244 (793)
Q Consensus 165 ~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G 244 (793)
..++ +...+. +.. ..+.+|+++.+.+. +....+.+.+.+++++.+|
T Consensus 391 --------------~~~~--------~~~g~g-~~~-------~~v~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~g 436 (645)
T 3j08_A 391 --------------EKVE--------VIAGEG-VVA-------DGILVGNKRLMEDF----GVAVSNEVELALEKLEREA 436 (645)
T ss_dssp --------------CCCE--------EETTTE-EEE-------TTEEEECHHHHHHT----TCCCCHHHHHHHHHHHTTT
T ss_pred --------------cceE--------EecCCc-eEE-------EEEEECCHHHHHhc----CCCccHHHHHHHHHHHhcC
Confidence 1111 000000 000 12456887665432 2233456778889999999
Q ss_pred ceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEE
Q 003824 245 LRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLW 324 (793)
Q Consensus 245 ~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~ 324 (793)
+|++++| .|++++|+++++|++|++++++|+.|+++||++|
T Consensus 437 ~~~l~va---------------------------------------~~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~ 477 (645)
T 3j08_A 437 KTAVIVA---------------------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVG 477 (645)
T ss_dssp CCCEEEE---------------------------------------ETTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEE
T ss_pred CeEEEEE---------------------------------------ECCEEEEEEEecCCchhHHHHHHHHHHHCCCEEE
Confidence 9999999 4679999999999999999999999999999999
Q ss_pred EEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEE
Q 003824 325 VLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALI 404 (793)
Q Consensus 325 mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 404 (793)
|+|||+..+|..+|+++|+.
T Consensus 478 ~~TGd~~~~a~~ia~~lgi~------------------------------------------------------------ 497 (645)
T 3j08_A 478 MITGDNWRSAEAISRELNLD------------------------------------------------------------ 497 (645)
T ss_dssp EECSSCHHHHHHHHHHHTCS------------------------------------------------------------
T ss_pred EEeCCCHHHHHHHHHHcCCC------------------------------------------------------------
Confidence 99999999999999999973
Q ss_pred EeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCc
Q 003824 405 IDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEG 484 (793)
Q Consensus 405 i~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~ 484 (793)
.++++++|++|..+++.+++ . +.|+|+|||.||++|++.||+||+|+ +..
T Consensus 498 ---------------------------~~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~ 547 (645)
T 3j08_A 498 ---------------------------LVIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVG-SGS 547 (645)
T ss_dssp ---------------------------EEECSCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHHHSSEEEEEC-CCS
T ss_pred ---------------------------EEEEeCCHHhHHHHHHHHhh-C-CeEEEEeCCHhHHHHHHhCCEEEEeC-CCc
Confidence 18999999999999999998 4 89999999999999999999999996 333
Q ss_pred ccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHHHHHHHH
Q 003824 485 MQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFT 533 (793)
Q Consensus 485 ~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n~~~~~~ 533 (793)
..++++||+++.+ ++.+.++ +.+||+.++|+++.+.|.+++|++.+.+
T Consensus 548 ~~a~~~AD~vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~l 597 (645)
T 3j08_A 548 DVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVILIPA 597 (645)
T ss_dssp CCSSCCSSSEESSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4489999999965 6668888 7899999999999999999999985443
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-26 Score=242.06 Aligned_cols=137 Identities=23% Similarity=0.312 Sum_probs=116.4
Q ss_pred CceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHH
Q 003824 292 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSA 371 (793)
Q Consensus 292 ~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 371 (793)
+-.+.|.+.+.|+++|+++++|+.|++.|++++|+|||+..++..+++.+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 446789999999999999999999999999999999999999999998888621
Q ss_pred HHHHHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHh
Q 003824 372 AAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKT 451 (793)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~ 451 (793)
+|..+.|+.|..+++.++.
T Consensus 178 -------------------------------------------------------------~f~~~~p~~k~~~~~~l~~ 196 (263)
T 2yj3_A 178 -------------------------------------------------------------YYSNLSPEDKVRIIEKLKQ 196 (263)
Confidence 3444458999999998887
Q ss_pred cCCCeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeee--cchhhHHHHHHHhhhhHHhHhhH
Q 003824 452 KTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAI--AQFRFLERLLLVHGHWCYRRISS 518 (793)
Q Consensus 452 ~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i--~~f~~l~~lll~~GR~~~~~i~~ 518 (793)
.+..|+|||||.||++|++.|++||++... ...+...||+++ .++..+..+ +..+|..+.+++.
T Consensus 197 -~~~~~~~VGD~~~D~~aa~~Agv~va~g~~-~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 197 -NGNKVLMIGDGVNDAAALALADVSVAMGNG-VDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPS 262 (263)
Confidence 677899999999999999999999988533 333677899999 677778877 7889999888764
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.89 E-value=7.8e-22 Score=208.45 Aligned_cols=274 Identities=23% Similarity=0.283 Sum_probs=194.2
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhccc
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKA 83 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (793)
...++++++|+++++|+|+++++|+||||||||.+.+.+.++...+. ++
T Consensus 12 ~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~------~~------------------------- 60 (287)
T 3a1c_A 12 KGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------DE------------------------- 60 (287)
T ss_dssp --CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS------CH-------------------------
T ss_pred HHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC------CH-------------------------
Confidence 35678999999999999999999999999999999999988866431 00
Q ss_pred ccCCCCcCchhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCce
Q 003824 84 SIKGFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTS 163 (793)
Q Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~ 163 (793)
.+++. +|..+. ..+.||.+.|+.+++++.|+.....
T Consensus 61 --------------------------~~~l~---~~~~~e-----------~~s~hp~~~a~~~~~~~~g~~~~~~---- 96 (287)
T 3a1c_A 61 --------------------------RELLR---LAAIAE-----------RRSEHPIAEAIVKKALEHGIELGEP---- 96 (287)
T ss_dssp --------------------------HHHHH---HHHHHT-----------TTCCSHHHHHHHHHHHHTTCCCCCC----
T ss_pred --------------------------HHHHH---HHHHHh-----------hcCCCHHHHHHHHHHHhcCCCcccc----
Confidence 11222 222221 1256999999999999998753210
Q ss_pred eEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhc
Q 003824 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADA 243 (793)
Q Consensus 164 ~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (793)
..+..+ . .+.+.. . .+.+|.++.+.+. +.+..+.+.+..+.+..+
T Consensus 97 ---------------~~~~~~---~----G~~~~~------~---~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~ 141 (287)
T 3a1c_A 97 ---------------EKVEVI---A----GEGVVA------D---GILVGNKRLMEDF----GVAVSNEVELALEKLERE 141 (287)
T ss_dssp ---------------SCEEEE---T----TTEEEE------T---TEEEECHHHHHHT----TCCCCHHHHHHHHHHHHT
T ss_pred ---------------ccceee---c----CCCeEE------E---EEEECCHHHHHhc----CCCccHHHHHHHHHHHhC
Confidence 011100 0 000000 1 1334655443221 111112345566778889
Q ss_pred cceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeE
Q 003824 244 GLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKL 323 (793)
Q Consensus 244 G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv 323 (793)
|.+++++++ +..++|.+..+++++|++.++|+.|+++|+++
T Consensus 142 g~~~i~~~~---------------------------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~ 182 (287)
T 3a1c_A 142 AKTAVIVAR---------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKV 182 (287)
T ss_dssp TCEEEEEEE---------------------------------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEE
T ss_pred CCeEEEEEE---------------------------------------CCEEEEEEEeccccchhHHHHHHHHHHCCCeE
Confidence 999999883 45789999999999999999999999999999
Q ss_pred EEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEE
Q 003824 324 WVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLAL 403 (793)
Q Consensus 324 ~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 403 (793)
.++||++...+..+...+|+..
T Consensus 183 ~i~T~~~~~~~~~~l~~~gl~~---------------------------------------------------------- 204 (287)
T 3a1c_A 183 GMITGDNWRSAEAISRELNLDL---------------------------------------------------------- 204 (287)
T ss_dssp EEECSSCHHHHHHHHHHHTCSE----------------------------------------------------------
T ss_pred EEEeCCCHHHHHHHHHHhCCce----------------------------------------------------------
Confidence 9999999999999998887621
Q ss_pred EEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCC
Q 003824 404 IIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVE 483 (793)
Q Consensus 404 vi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~ 483 (793)
.|..+.|..|...++.+.. . ..+++|||+.||++|.+.|+++|++.+..
T Consensus 205 -----------------------------~f~~i~~~~K~~~~~~l~~-~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~ 253 (287)
T 3a1c_A 205 -----------------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGS 253 (287)
T ss_dssp -----------------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECTTTCHHHHHHSSEEEEECCCS
T ss_pred -----------------------------eeeecChHHHHHHHHHHhc-C-CeEEEEECCHHHHHHHHHCCeeEEeCCCC
Confidence 4455568899999998877 5 88999999999999999999999985432
Q ss_pred cccccccCCeee--cchhhHHHHHHHhhhhHHhHhh
Q 003824 484 GMQAVMSSDIAI--AQFRFLERLLLVHGHWCYRRIS 517 (793)
Q Consensus 484 ~~~a~~~aD~~i--~~f~~l~~lll~~GR~~~~~i~ 517 (793)
...+..+|+++ .++..+..+ +..+|..+.+++
T Consensus 254 -~~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 254 -DVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp -CCSSCCSSEEESSSCTHHHHHH-HHTTC-------
T ss_pred -HHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHhhC
Confidence 23567899999 778888877 789999888764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.5e-20 Score=194.56 Aligned_cols=274 Identities=24% Similarity=0.286 Sum_probs=186.7
Q ss_pred eccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccccCCCCcC
Q 003824 12 ARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFE 91 (793)
Q Consensus 12 ~r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (793)
+|+++++|.|++++.|+|||+||||.|+|.+.++...+. .
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~------~---------------------------------- 40 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH------S---------------------------------- 40 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS------C----------------------------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC------C----------------------------------
Confidence 588999999999999999999999999999998865432 0
Q ss_pred chhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCC
Q 003824 92 DERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDP 171 (793)
Q Consensus 92 ~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~ 171 (793)
..+++..++.+.. .+.+|...++.+++++.|+.....
T Consensus 41 -----------------~~~~~~~~~~~~~--------------~s~~~~~~a~~~~~~~~g~~~~~~------------ 77 (280)
T 3skx_A 41 -----------------EDELLQIAASLEA--------------RSEHPIAAAIVEEAEKRGFGLTEV------------ 77 (280)
T ss_dssp -----------------HHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCCC------------
T ss_pred -----------------HHHHHHHHHHhhc--------------cCCCHHHHHHHHHHHhcCCCCCCc------------
Confidence 1123333333211 135788999999999988653210
Q ss_pred CCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhccceEEEEE
Q 003824 172 VTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILA 251 (793)
Q Consensus 172 ~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a 251 (793)
..+. .++ .+.+...+ ++.. +..|.++.+........ .....+...|.+++.++
T Consensus 78 -------~~~~---~~~----g~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 130 (280)
T 3skx_A 78 -------EEFR---AIP----GKGVEGIV---NGRR--YMVVSPGYIRELGIKTD--------ESVEKLKQQGKTVVFIL 130 (280)
T ss_dssp -------EEEE---EET----TTEEEEEE---TTEE--EEEECHHHHHHTTCCCC--------TTHHHHHTTTCEEEEEE
T ss_pred -------ccee---ecC----CCEEEEEE---CCEE--EEEecHHHHHHcCCCch--------HHHHHHHhCCCeEEEEE
Confidence 1111 000 11111111 2221 22366555443221111 23445677888888877
Q ss_pred EEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCch
Q 003824 252 YRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKM 331 (793)
Q Consensus 252 ~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~ 331 (793)
.+..++|.+.+.++++|++.++++.|++.|+++.++||+..
T Consensus 131 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~ 171 (280)
T 3skx_A 131 ---------------------------------------KNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNR 171 (280)
T ss_dssp ---------------------------------------ETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCH
T ss_pred ---------------------------------------ECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCH
Confidence 35578999999999999999999999999999999999999
Q ss_pred hhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhh
Q 003824 332 ETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLT 411 (793)
Q Consensus 332 ~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 411 (793)
..+..+++.+|+..
T Consensus 172 ~~~~~~~~~~gl~~------------------------------------------------------------------ 185 (280)
T 3skx_A 172 FVAKWVAEELGLDD------------------------------------------------------------------ 185 (280)
T ss_dssp HHHHHHHHHHTCSE------------------------------------------------------------------
T ss_pred HHHHHHHHHcCChh------------------------------------------------------------------
Confidence 99999998888631
Q ss_pred HhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCcccccccC
Q 003824 412 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSS 491 (793)
Q Consensus 412 ~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~a 491 (793)
.|..+.|.+|...++-+.+ .. .++|||||.||++|++.|++||++.+.. ..++..|
T Consensus 186 ---------------------~f~~~~~~~k~~~~k~~~~-~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~-~~~~~~a 241 (280)
T 3skx_A 186 ---------------------YFAEVLPHEKAEKVKEVQQ-KY-VTAMVGDGVNDAPALAQADVGIAIGAGT-DVAVETA 241 (280)
T ss_dssp ---------------------EECSCCGGGHHHHHHHHHT-TS-CEEEEECTTTTHHHHHHSSEEEECSCCS-SSCCCSS
T ss_pred ---------------------HhHhcCHHHHHHHHHHHHh-cC-CEEEEeCCchhHHHHHhCCceEEecCCc-HHHHhhC
Confidence 5666778899999988876 33 6799999999999999999999995533 3478899
Q ss_pred Ceee--cchhhHHHHHHHhhhhHHhHhhHhHHHHHH
Q 003824 492 DIAI--AQFRFLERLLLVHGHWCYRRISSMICYFFY 525 (793)
Q Consensus 492 D~~i--~~f~~l~~lll~~GR~~~~~i~~~i~~~~~ 525 (793)
|+++ .+...+.++ +..+|..+.+++..+.|.+.
T Consensus 242 ~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 242 DIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp SEECSSCCTHHHHHH-HHHHHTCCC-----------
T ss_pred CEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 9998 567778887 78899998888887777653
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.79 E-value=2e-20 Score=179.65 Aligned_cols=141 Identities=20% Similarity=0.217 Sum_probs=110.4
Q ss_pred HHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeEEeEeeCC
Q 003824 110 QKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEF 189 (793)
Q Consensus 110 ~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F 189 (793)
.+.++..++|+..... .++|+|.||++++...+..- ....|+++..+||
T Consensus 16 ~~vl~~a~L~s~~~~~-----------~~n~~d~Ail~~~~~~~~~~--------------------~~~~~~~~~eiPF 64 (170)
T 3gwi_A 16 ERVLHSAWLNSHYQTG-----------LKNLLDTAVLEGTDEESARS--------------------LASRWQKIDEIPF 64 (170)
T ss_dssp HHHHHHHHHHHHHCCS-----------CCCHHHHHHHHTSCHHHHHH--------------------HHHHSEEEEEECC
T ss_pred HHHHHHHHHcCCCCCC-----------CCChHHHHHHHHHHhcChhh--------------------hhhcCeEEeeEec
Confidence 3567778888654321 25999999999875432100 1257899999999
Q ss_pred CCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhc---------chhhHHHHHHHHHHHHhccceEEEEEEEecCHHHH
Q 003824 190 SSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILAYRELDEKEY 260 (793)
Q Consensus 190 ~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~ 260 (793)
||+||||||+++.++|++++|+|||||.|+++|+.. +++.++.+.+.+++|+.+|+|||++|||.++..+.
T Consensus 65 ds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~ 144 (170)
T 3gwi_A 65 DFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREG 144 (170)
T ss_dssp CTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSS
T ss_pred CcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCcc
Confidence 999999999999888889999999999999999852 34567889999999999999999999999875320
Q ss_pred HHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecc
Q 003824 261 KQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDK 304 (793)
Q Consensus 261 ~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~ 304 (793)
.+ ....|+||+|+|++|+-|.
T Consensus 145 ------------~~-----------~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 145 ------------DY-----------QRADESDLILEGYIAFLDH 165 (170)
T ss_dssp ------------CC-----------CGGGSCSEEEEEEEEEEC-
T ss_pred ------------cc-----------CccccCCcEEEehhccccc
Confidence 00 1235899999999999885
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.51 E-value=9.6e-15 Score=154.76 Aligned_cols=142 Identities=13% Similarity=0.091 Sum_probs=103.2
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHH
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 381 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (793)
.++++|+++++++.|+++|+++.|+|||...++.++|+++|+...+..+.......
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~------------------------ 194 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDF------------------------ 194 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEE------------------------
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEE------------------------
Confidence 47999999999999999999999999999999999999999876543332111000
Q ss_pred HHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEc
Q 003824 382 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 461 (793)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 461 (793)
........+.+... ..+++..|.+|...+..+++ .+..|+|+|
T Consensus 195 ---------------~~~~~~~~~~~~~i---------------------~~~~k~~~~~k~~~~~~~~~-~~~~v~~vG 237 (297)
T 4fe3_A 195 ---------------DENGVLKGFKGELI---------------------HVFNKHDGALKNTDYFSQLK-DNSNIILLG 237 (297)
T ss_dssp ---------------CTTSBEEEECSSCC---------------------CTTCHHHHHHTCHHHHHHTT-TCCEEEEEE
T ss_pred ---------------cccceeEecccccc---------------------chhhcccHHHHHHHHHHhhc-cCCEEEEEe
Confidence 00011112222211 14667778888888888876 788999999
Q ss_pred CCccChhhhh---hcceeEEecc--C----CcccccccCCeeecchhh--HHHH
Q 003824 462 DGANDVGMLQ---EADIGVGISG--V----EGMQAVMSSDIAIAQFRF--LERL 504 (793)
Q Consensus 462 DG~ND~~ml~---~AdvGI~i~g--~----~~~~a~~~aD~~i~~f~~--l~~l 504 (793)
||+||+||++ .||+||+|+- . ....+++++|+++.++++ +++.
T Consensus 238 DGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~ 291 (297)
T 4fe3_A 238 DSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 291 (297)
T ss_dssp SSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred CcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHH
Confidence 9999999955 9999998852 1 112268999999999766 5554
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.07 E-value=2e-10 Score=112.79 Aligned_cols=137 Identities=11% Similarity=0.083 Sum_probs=101.0
Q ss_pred eEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHH
Q 003824 294 ILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAA 373 (793)
Q Consensus 294 ~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 373 (793)
..++...++|.+ +|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 344455555444 9999999999999999999999999999998732
Q ss_pred HHHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcC
Q 003824 374 AALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT 453 (793)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~ 453 (793)
+|... ..|...++.+.+..
T Consensus 88 -----------------------------------------------------------~f~~~--~~K~~~~~~~~~~~ 106 (189)
T 3mn1_A 88 -----------------------------------------------------------LFQGR--EDKLVVLDKLLAEL 106 (189)
T ss_dssp -----------------------------------------------------------EECSC--SCHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------HhcCc--CChHHHHHHHHHHc
Confidence 11111 45555555555433
Q ss_pred ---CCeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc------hhhHHHHHHHhhhhHHhHhhHhHHHHH
Q 003824 454 ---SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHWCYRRISSMICYFF 524 (793)
Q Consensus 454 ---~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~------f~~l~~lll~~GR~~~~~i~~~i~~~~ 524 (793)
...+++|||+.||++|++.|++|+++.+.. ..++..||+++.+ .+.+.++ +...|..+.++.+.+.|.+
T Consensus 107 g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~ 184 (189)
T 3mn1_A 107 QLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAA-SFVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGH 184 (189)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC
T ss_pred CCChhHEEEECCCHHHHHHHHHCCCeEEeCCcc-HHHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhccc
Confidence 468999999999999999999999985533 3377889999988 4556666 5667888888888877766
Q ss_pred HHH
Q 003824 525 YKN 527 (793)
Q Consensus 525 ~~n 527 (793)
..|
T Consensus 185 ~~~ 187 (189)
T 3mn1_A 185 HHH 187 (189)
T ss_dssp ---
T ss_pred ccc
Confidence 554
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.94 E-value=3.4e-10 Score=118.25 Aligned_cols=76 Identities=28% Similarity=0.421 Sum_probs=53.4
Q ss_pred cCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchhh------HHHH
Q 003824 436 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF------LERL 504 (793)
Q Consensus 436 r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~------l~~l 504 (793)
...|. .|+..++.+.++.| ..|++|||+.||++|++.|++||+|++.. ..++.+||+++.+... |.++
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~-~~~k~~A~~v~~~~~e~Gv~~~i~~~ 268 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQ-EPVKKAADYITLTNDEDGVAEAIERI 268 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECCCGGGTHHHHHHHHH
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCc-HHHHHhCCEEcCCCCCcHHHHHHHHH
Confidence 34444 78888887776544 57999999999999999999999996544 4488999999976332 6666
Q ss_pred HHHhhhhH
Q 003824 505 LLVHGHWC 512 (793)
Q Consensus 505 ll~~GR~~ 512 (793)
+..+|+..
T Consensus 269 ~~~~~~~~ 276 (279)
T 4dw8_A 269 FNVEGHHH 276 (279)
T ss_dssp C-------
T ss_pred Hhcccccc
Confidence 66677643
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=5.8e-09 Score=101.36 Aligned_cols=130 Identities=12% Similarity=0.075 Sum_probs=92.3
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHH
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQL 384 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (793)
+.+++.++|+.|+++|++++++||++...+..+++.+|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 44567799999999999999999999999999999888732
Q ss_pred hhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC---CeEEEEc
Q 003824 385 IRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIG 461 (793)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vlaiG 461 (793)
.++| ...|...++.+.+..+ +.+++||
T Consensus 77 -------------------~~~~-------------------------------~k~k~~~~~~~~~~~~~~~~~~~~vG 106 (180)
T 1k1e_A 77 -------------------FFLG-------------------------------KLEKETACFDLMKQAGVTAEQTAYIG 106 (180)
T ss_dssp -------------------EEES-------------------------------CSCHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred -------------------eecC-------------------------------CCCcHHHHHHHHHHcCCCHHHEEEEC
Confidence 0111 1334555554433233 6799999
Q ss_pred CCccChhhhhhcceeEEeccCCcccccccCCeeecchh------hHHHHHHHhhhhHHhHhhHhHHHHHH
Q 003824 462 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR------FLERLLLVHGHWCYRRISSMICYFFY 525 (793)
Q Consensus 462 DG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~------~l~~lll~~GR~~~~~i~~~i~~~~~ 525 (793)
|+.||++|++.|++++++.+.. ..++..||+++.+.. .+.+. +...|..+.++...+.|.+.
T Consensus 107 D~~~Di~~~~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~g~~~~~~~~-~l~~~~~~~~~~~~~~~~~~ 174 (180)
T 1k1e_A 107 DDSVDLPAFAACGTSFAVADAP-IYVKNAVDHVLSTHGGKGAFREMSDM-ILQAQGKSSVFDTAQGFLKS 174 (180)
T ss_dssp CSGGGHHHHHHSSEEEECTTSC-HHHHTTSSEECSSCTTTTHHHHHHHH-HHHHTTCTHHHHCHHHHHHH
T ss_pred CCHHHHHHHHHcCCeEEeCCcc-HHHHhhCCEEecCCCCCcHHHHHHHH-HHHhcCchhhhhhccchhhh
Confidence 9999999999999999985433 336788999998742 23333 33455557777666666543
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.85 E-value=1.8e-09 Score=112.77 Aligned_cols=70 Identities=17% Similarity=0.271 Sum_probs=43.5
Q ss_pred hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchh------hHHHHHHHhhhh
Q 003824 441 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR------FLERLLLVHGHW 511 (793)
Q Consensus 441 qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~------~l~~lll~~GR~ 511 (793)
.|+..++.+.++.| ..|++|||+.||++|++.|++||+|.+... .++.+||++..+.. .|.++++-+|+.
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~-~~k~~A~~v~~~~~e~Gv~~~i~~~~~~~~~~ 275 (279)
T 3mpo_A 197 SKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAID-EVKEAAQAVTLTNAENGVAAAIRKYALNEGHH 275 (279)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CC-HHHHHCSCBC------CHHHHHC---------
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCH-HHHHhcceeccCCCccHHHHHHHHHhcccCcc
Confidence 59988888776554 679999999999999999999999965544 38899999987633 256665666664
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.82 E-value=2.9e-08 Score=103.92 Aligned_cols=191 Identities=14% Similarity=0.144 Sum_probs=103.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc----cccCceEEEEccCCCcccccchhhhHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL----LRQGMRQVIISSETPESKTLEKSEDKSAAAAALKAS 379 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (793)
.+-+.+.++|++|+++|++++++||+....+..+...+++ +..++..+...+.......+......+.+. ...+.
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~-~~~~~ 117 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCR-MVRDE 117 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHHHHHHHHH-HHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHHHHHHHHH-HHHHh
Confidence 4678899999999999999999999999999988877664 333333333222111111222222222221 11111
Q ss_pred ----------------------HHHHHhhhh-------hccccccCCCCCeEEEE-eCchhhHhhhhhHHHHHHHHHhcC
Q 003824 380 ----------------------VLHQLIRGK-------ELLDSSNESLGPLALII-DGKSLTYALEDDVKDLFLELAIGC 429 (793)
Q Consensus 380 ----------------------~~~~~~~~~-------~~~~~~~~~~~~~~lvi-~G~~l~~~~~~~~~~~~~~l~~~~ 429 (793)
....+.... ..+............+. +.+..... .+.+.+.+.. ..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~~~~~~~~-~~~l~~~~~~---~~ 193 (283)
T 3dao_A 118 LPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHPDKCEELC-TPVFIPAWNK---KA 193 (283)
T ss_dssp CTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECSSCHHHHH-TTTHHHHHTT---TE
T ss_pred cCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcChHHHHHH-HHHHHHHhcC---CE
Confidence 001111000 00000000111112222 22222211 1223333321 01
Q ss_pred Cee----EEEcCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchhh
Q 003824 430 ASV----ICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF 500 (793)
Q Consensus 430 ~~v----i~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~ 500 (793)
..+ .+....|. .|+..++.+.++.| ..|++|||+.||++|++.|++||+|++... .++..||++..+...
T Consensus 194 ~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~-~~k~~A~~v~~s~~e 272 (283)
T 3dao_A 194 HLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQ-EVIAAAKHTCAPYWE 272 (283)
T ss_dssp EEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCH-HHHHHSSEEECCGGG
T ss_pred EEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCH-HHHHhcCeECCCCCC
Confidence 111 12233343 59988888877655 679999999999999999999999966544 488999999886443
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.81 E-value=2.3e-09 Score=105.45 Aligned_cols=97 Identities=18% Similarity=0.132 Sum_probs=75.2
Q ss_pred HHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhc
Q 003824 311 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 390 (793)
Q Consensus 311 ~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (793)
.+|+.|+++|+++.|+||++...+..+++.+|+..
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~--------------------------------------------- 93 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL--------------------------------------------- 93 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE---------------------------------------------
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE---------------------------------------------
Confidence 34999999999999999999999999999998731
Q ss_pred cccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc---CCCeEEEEcCCccCh
Q 003824 391 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDV 467 (793)
Q Consensus 391 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~ND~ 467 (793)
++... +.|...++.+.+. ....+++|||+.||+
T Consensus 94 ------------------------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi 129 (195)
T 3n07_A 94 ------------------------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDW 129 (195)
T ss_dssp ------------------------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGH
T ss_pred ------------------------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHH
Confidence 11111 3455445444433 236799999999999
Q ss_pred hhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 468 GMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 468 ~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
+|++.|++++++.+.. ..++..||+++.+
T Consensus 130 ~~~~~ag~~va~~na~-~~~~~~ad~v~~~ 158 (195)
T 3n07_A 130 PVMEKVALRVCVADGH-PLLAQRANYVTHI 158 (195)
T ss_dssp HHHTTSSEEEECTTSC-HHHHHHCSEECSS
T ss_pred HHHHHCCCEEEECChH-HHHHHhCCEEEcC
Confidence 9999999999996543 3378899999976
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.80 E-value=2.6e-09 Score=112.21 Aligned_cols=76 Identities=16% Similarity=0.200 Sum_probs=55.8
Q ss_pred hhHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchh------hHHHHHHHhhh
Q 003824 440 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR------FLERLLLVHGH 510 (793)
Q Consensus 440 ~qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~------~l~~lll~~GR 510 (793)
..|+..++.+.++.| ..|++|||+.||++|++.|++||+|.+.. ..++..||+++.+.. .|.+++...++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~-~~~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~ 279 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAV-PEIKRKADWVTRSNDEQGVAYMMKEYFRMQQR 279 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHSSEECCCTTTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCc-HHHHHhcCEECCCCCccHHHHHHHHHHHhcCc
Confidence 368888888776554 57999999999999999999999996554 348899999987633 36666566666
Q ss_pred hHHhHh
Q 003824 511 WCYRRI 516 (793)
Q Consensus 511 ~~~~~i 516 (793)
+-|.+-
T Consensus 280 ~~~~~~ 285 (290)
T 3dnp_A 280 KGFLDK 285 (290)
T ss_dssp C-----
T ss_pred ccHHhH
Confidence 665543
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.1e-08 Score=101.87 Aligned_cols=108 Identities=14% Similarity=0.129 Sum_probs=82.6
Q ss_pred EEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHH
Q 003824 295 LLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAA 374 (793)
Q Consensus 295 ~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 374 (793)
.+....+.|.+ +|+.|+++|+++.|+||+....+..+++.+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 34444555544 8999999999999999999999999999998732
Q ss_pred HHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc--
Q 003824 375 ALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK-- 452 (793)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~-- 452 (793)
++... +.|..+++.+.+.
T Consensus 118 ----------------------------------------------------------~f~~~--k~K~~~l~~~~~~lg 137 (211)
T 3ij5_A 118 ----------------------------------------------------------LYQGQ--SDKLVAYHELLATLQ 137 (211)
T ss_dssp ----------------------------------------------------------EECSC--SSHHHHHHHHHHHHT
T ss_pred ----------------------------------------------------------hhccc--CChHHHHHHHHHHcC
Confidence 12222 4556666655543
Q ss_pred -CCCeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecch
Q 003824 453 -TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 498 (793)
Q Consensus 453 -~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f 498 (793)
....+++|||+.||++|++.|++++++.+.. ..++..||+++.+.
T Consensus 138 ~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~-~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 138 CQPEQVAYIGDDLIDWPVMAQVGLSVAVADAH-PLLLPKAHYVTRIK 183 (211)
T ss_dssp CCGGGEEEEECSGGGHHHHTTSSEEEECTTSC-TTTGGGSSEECSSC
T ss_pred cCcceEEEEcCCHHHHHHHHHCCCEEEeCCcc-HHHHhhCCEEEeCC
Confidence 2478999999999999999999999996543 33788999999874
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.80 E-value=4.9e-09 Score=112.70 Aligned_cols=151 Identities=20% Similarity=0.150 Sum_probs=94.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.++++.|+++|+++.|+||+....+..++..+|+..--...+.+...
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~--------------------------- 230 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSG--------------------------- 230 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCC---------------------------
Confidence 68999999999999999999999999999999999999984311111111000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc---CCCeEEEE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAI 460 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlai 460 (793)
.++|.. ...-..++.|..+++.+.+. ....|++|
T Consensus 231 --------------------~~tg~~-----------------------~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~v 267 (335)
T 3n28_A 231 --------------------KLTGQV-----------------------LGEVVSAQTKADILLTLAQQYDVEIHNTVAV 267 (335)
T ss_dssp --------------------EEEEEE-----------------------ESCCCCHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------eeeeee-----------------------cccccChhhhHHHHHHHHHHcCCChhhEEEE
Confidence 111100 00012234555555554443 33689999
Q ss_pred cCCccChhhhhhcceeEEeccCCcccccccCCeeecc--hhhHHHHHHHhhhhHHhHhhHhHHHHHHHH
Q 003824 461 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWCYRRISSMICYFFYKN 527 (793)
Q Consensus 461 GDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~~~~i~~~i~~~~~~n 527 (793)
|||.||++|++.|++||++.+.+. ++..||+++.. +..+..+ +......-.|++..+.+.+..|
T Consensus 268 GDs~nDi~~a~~aG~~va~~~~~~--~~~~a~~v~~~~~l~~v~~~-L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 268 GDGANDLVMMAAAGLGVAYHAKPK--VEAKAQTAVRFAGLGGVVCI-LSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp ECSGGGHHHHHHSSEEEEESCCHH--HHTTSSEEESSSCTHHHHHH-HHHHHHHTTCCCCC--------
T ss_pred eCCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEEecCCHHHHHHH-HHhHHHHhhhhccccccccccc
Confidence 999999999999999999944333 78889998854 3334444 3333334456666666665443
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.3e-08 Score=97.38 Aligned_cols=107 Identities=11% Similarity=0.045 Sum_probs=80.2
Q ss_pred CceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHH--HcCccccCceEEEEccCCCcccccchhhhH
Q 003824 292 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGF--ACSLLRQGMRQVIISSETPESKTLEKSEDK 369 (793)
Q Consensus 292 ~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~--~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~ 369 (793)
+-..++.+.++|.. +|+.|++.|+++.|+||+ ..+..+++ .+|+.
T Consensus 30 ~g~~~~~f~~~D~~------~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDAI------GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHHH------HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcHH------HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 44567777777773 899999999999999999 67777777 44431
Q ss_pred HHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHH
Q 003824 370 SAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLV 449 (793)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~l 449 (793)
++ ..+++|...++.+
T Consensus 77 ---------------------------------------------------------------~~--~g~~~K~~~l~~~ 91 (168)
T 3ewi_A 77 ---------------------------------------------------------------TE--VSVSDKLATVDEW 91 (168)
T ss_dssp ---------------------------------------------------------------EE--CSCSCHHHHHHHH
T ss_pred ---------------------------------------------------------------EE--ECCCChHHHHHHH
Confidence 01 1124566666655
Q ss_pred HhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 450 KTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 450 k~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
.+..+ ..+++|||+.||++|++.|+++++|.+.. ..++..||+++.+
T Consensus 92 ~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~-~~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 92 RKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADAC-SGAQKAVGYICKC 141 (168)
T ss_dssp HHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCC-HHHHTTCSEECSS
T ss_pred HHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChh-HHHHHhCCEEeCC
Confidence 55433 67999999999999999999999995543 3488999999986
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.74 E-value=2.4e-08 Score=96.59 Aligned_cols=105 Identities=12% Similarity=0.149 Sum_probs=80.2
Q ss_pred HHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhcc
Q 003824 312 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 391 (793)
Q Consensus 312 ~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (793)
+|+.|+++|+++.++||+....+..+++.+|+.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------------------------- 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------------------------- 79 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----------------------------------------------
Confidence 899999999999999999999999999998862
Q ss_pred ccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcC---CCeEEEEcCCccChh
Q 003824 392 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLAIGDGANDVG 468 (793)
Q Consensus 392 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ 468 (793)
+++.. +.|...++.+.+.. ...++++||+.||++
T Consensus 80 -----------------------------------------~~~~~--~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~ 116 (176)
T 3mmz_A 80 -----------------------------------------VLHGI--DRKDLALKQWCEEQGIAPERVLYVGNDVNDLP 116 (176)
T ss_dssp -----------------------------------------EEESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred -----------------------------------------eEeCC--CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHH
Confidence 01111 34555555444433 367999999999999
Q ss_pred hhhhcceeEEeccCCcccccccCCeeecc------hhhHHHHHHH
Q 003824 469 MLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLV 507 (793)
Q Consensus 469 ml~~AdvGI~i~g~~~~~a~~~aD~~i~~------f~~l~~lll~ 507 (793)
|++.|++|+++.+.. ..++..||+++.+ .+.+.++|+.
T Consensus 117 ~~~~ag~~v~~~~~~-~~~~~~ad~v~~~~~~~g~~~~l~~~l~~ 160 (176)
T 3mmz_A 117 CFALVGWPVAVASAH-DVVRGAARAVTTVPGGDGAIREIASWILG 160 (176)
T ss_dssp HHHHSSEEEECTTCC-HHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred HHHHCCCeEECCChh-HHHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 999999999995533 3377889999988 5556666443
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.70 E-value=1e-08 Score=103.66 Aligned_cols=172 Identities=14% Similarity=0.069 Sum_probs=96.7
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccc----cCceEEEE-ccCCC-cccccchhhhHHHHHHH
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR----QGMRQVII-SSETP-ESKTLEKSEDKSAAAAA 375 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~----~~~~~~~i-~~~~~-~~~~~~~~~~~~~~~~~ 375 (793)
..++.+++.++|++|+++|++++++|||....+..+++.+|+.. .++..+.- ++... ....+ .....+
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l---~~~~~i--- 93 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNE---GTNKFL--- 93 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSH---HHHHHH---
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccH---HHHHHH---
Confidence 34577889999999999999999999999999999999988632 22222221 11100 00111 111111
Q ss_pred HHHHHHHHHhhhhhccccccC------CCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeE-----EEcCCh--hhH
Q 003824 376 LKASVLHQLIRGKELLDSSNE------SLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVI-----CCRSSP--KQK 442 (793)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi-----~~r~sP--~qK 442 (793)
..+.. .+ .... ....+.. + +. ..+++..+.+... ....+ +..+.| ..|
T Consensus 94 ------~~~~~---~~-~~~~~~~~~~~~~~~~~-~----~~-~~~~~~~~~~~~~---~~~~~~~~~~~~ei~~~~~~K 154 (227)
T 1l6r_A 94 ------EEMSK---RT-SMRSILTNRWREASTGF-D----ID-PEDVDYVRKEAES---RGFVIFYSGYSWHLMNRGEDK 154 (227)
T ss_dssp ------HHHTT---TS-SCBCCGGGGGCSSSEEE-B----CC-GGGHHHHHHHHHT---TTEEEEEETTEEEEEETTCSH
T ss_pred ------HHHHH---Hh-cCCccccccceecccce-E----Ee-cCCHHHHHHHHHh---cCEEEEecCcEEEEecCCCCH
Confidence 11111 00 0000 0000000 0 00 0011111111111 11112 123335 579
Q ss_pred HHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchh
Q 003824 443 ALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 499 (793)
Q Consensus 443 ~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~ 499 (793)
+..++.+.+..+ ..++++|||.||.+|++.|++||+|.+.. ..++..||+++.+..
T Consensus 155 ~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~-~~~k~~a~~v~~~~~ 213 (227)
T 1l6r_A 155 AFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANAT-DNIKAVSDFVSDYSY 213 (227)
T ss_dssp HHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSC-HHHHHHCSEECSCCT
T ss_pred HHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCch-HHHHHhCCEEecCCC
Confidence 988888876543 57999999999999999999999996543 347788999987643
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.70 E-value=1.9e-08 Score=98.65 Aligned_cols=114 Identities=16% Similarity=0.148 Sum_probs=82.5
Q ss_pred HHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccc
Q 003824 313 IDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLD 392 (793)
Q Consensus 313 I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (793)
|+.|+++|+++.++||+....+..++..+|+..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~----------------------------------------------- 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH----------------------------------------------- 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------------------------
Confidence 999999999999999999999999999988742
Q ss_pred cccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEc--CChhhHHHHHHHHHhcCCCeEEEEcCCccChhhh
Q 003824 393 SSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR--SSPKQKALVTRLVKTKTSSTTLAIGDGANDVGML 470 (793)
Q Consensus 393 ~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r--~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml 470 (793)
++.. ..|+-...+++.+.- ....+++|||+.||++|+
T Consensus 88 ----------------------------------------~~~~~kpk~~~~~~~~~~~~~-~~~~~~~vGD~~~Di~~~ 126 (191)
T 3n1u_A 88 ----------------------------------------YYKGQVDKRSAYQHLKKTLGL-NDDEFAYIGDDLPDLPLI 126 (191)
T ss_dssp ----------------------------------------EECSCSSCHHHHHHHHHHHTC-CGGGEEEEECSGGGHHHH
T ss_pred ----------------------------------------ceeCCCChHHHHHHHHHHhCC-CHHHEEEECCCHHHHHHH
Confidence 1111 122223334443332 456799999999999999
Q ss_pred hhcceeEEeccCCcccccccCCeeecc------hhhHHHHHHHhhhhHHhHh
Q 003824 471 QEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHWCYRRI 516 (793)
Q Consensus 471 ~~AdvGI~i~g~~~~~a~~~aD~~i~~------f~~l~~lll~~GR~~~~~i 516 (793)
+.|++++++.+.. ..++..||+++.+ .+.+.+. +...|..+.++
T Consensus 127 ~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~ 176 (191)
T 3n1u_A 127 QQVGLGVAVSNAV-PQVLEFADWRTERTGGRGAVRELCDL-ILNAQNKAELA 176 (191)
T ss_dssp HHSSEEEECTTCC-HHHHHHSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHH
T ss_pred HHCCCEEEeCCcc-HHHHHhCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHH
Confidence 9999999985543 3478899999987 3445555 44555555553
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.69 E-value=2.6e-07 Score=95.10 Aligned_cols=58 Identities=26% Similarity=0.328 Sum_probs=47.2
Q ss_pred hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchh
Q 003824 441 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 499 (793)
Q Consensus 441 qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~ 499 (793)
.|+..++.+.++.| ..|++|||+.||++|++.|++||+|.+ ....++..||++..+..
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~n-a~~~~k~~A~~v~~~~~ 243 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGN-AHEEVKRVADFVTKPVD 243 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETT-CCHHHHHTCSEEECCGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCC-CcHHHHHhCCEEeCCCC
Confidence 58888877766533 679999999999999999999999954 44458899999987644
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.63 E-value=3.2e-08 Score=104.74 Aligned_cols=60 Identities=17% Similarity=0.223 Sum_probs=49.2
Q ss_pred hhHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchhh
Q 003824 440 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF 500 (793)
Q Consensus 440 ~qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~ 500 (793)
..|+..++.+.++.| ..|++|||+.||++|++.|++||+|.+.. ..++.+||+++.+...
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~-~~~k~~Ad~v~~~~~e 289 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAP-KNVKAAANYQAKSNDE 289 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSC-HHHHHHCSEECCCGGG
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcC-HHHHHhccEEcCCCCc
Confidence 469988888776554 67999999999999999999999996554 3488999999887443
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.62 E-value=6.9e-08 Score=94.60 Aligned_cols=117 Identities=18% Similarity=0.250 Sum_probs=88.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.+.++.|++.|++++++|++....+..+ ..+|+..- ...+..
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~------------------------------ 126 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIF------------------------------ 126 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEE------------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEe------------------------------
Confidence 7899999999999999999999999988887777 77776321 111110
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
.... .......|..|...++.+ ....+++|||+
T Consensus 127 ----------------------~~~~----------------------~~~~~~~~~~k~~~l~~l---~~~~~i~iGD~ 159 (201)
T 4ap9_A 127 ----------------------EDGK----------------------FQGIRLRFRDKGEFLKRF---RDGFILAMGDG 159 (201)
T ss_dssp ----------------------ETTE----------------------EEEEECCSSCHHHHHGGG---TTSCEEEEECT
T ss_pred ----------------------eCCc----------------------eECCcCCccCHHHHHHhc---CcCcEEEEeCC
Confidence 0000 011445677888888777 45678999999
Q ss_pred ccChhhhhhcceeEEeccCCcccccccCCeeecchhhHHHH
Q 003824 464 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 464 ~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~l~~l 504 (793)
.||+.|++.|++||++.+... .||+++.++..+..+
T Consensus 160 ~~Di~~~~~ag~~v~~~~~~~-----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 160 YADAKMFERADMGIAVGREIP-----GADLLVKDLKELVDF 195 (201)
T ss_dssp TCCHHHHHHCSEEEEESSCCT-----TCSEEESSHHHHHHH
T ss_pred HHHHHHHHhCCceEEECCCCc-----cccEEEccHHHHHHH
Confidence 999999999999999965443 899999998877666
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=6.2e-08 Score=92.28 Aligned_cols=110 Identities=19% Similarity=0.105 Sum_probs=80.6
Q ss_pred HHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhcc
Q 003824 312 CIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELL 391 (793)
Q Consensus 312 ~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (793)
+++.|+++|+++.++||++...+..++..+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999988732
Q ss_pred ccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc---CCCeEEEEcCCccChh
Q 003824 392 DSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDVG 468 (793)
Q Consensus 392 ~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~ND~~ 468 (793)
.+... +.|...++.+.+. ....+++|||+.||++
T Consensus 73 -----------------------------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~ 109 (164)
T 3e8m_A 73 -----------------------------------------LFQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAK 109 (164)
T ss_dssp -----------------------------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHH
T ss_pred -----------------------------------------eeccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 11111 2344444333332 2368999999999999
Q ss_pred hhhhcceeEEeccCCcccccccCCeeecc------hhhHHHHHHHhhhhH
Q 003824 469 MLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLLVHGHWC 512 (793)
Q Consensus 469 ml~~AdvGI~i~g~~~~~a~~~aD~~i~~------f~~l~~lll~~GR~~ 512 (793)
|.+.|++++++.+.. ..++..||+++.+ +..+.+.++ +|++.
T Consensus 110 ~~~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~~ 157 (164)
T 3e8m_A 110 LLKRVGIAGVPASAP-FYIRRLSTIFLEKRGGEGVFREFVEKVL-GINLE 157 (164)
T ss_dssp HHTTSSEEECCTTSC-HHHHTTCSSCCCCCTTTTHHHHHHHHHT-TCCHH
T ss_pred HHHHCCCeEEcCChH-HHHHHhCcEEeccCCCCcHHHHHHHHHH-ccCch
Confidence 999999999885433 3478899999988 445555545 55543
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.58 E-value=3e-08 Score=102.94 Aligned_cols=60 Identities=18% Similarity=0.256 Sum_probs=48.2
Q ss_pred hhHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchhh
Q 003824 440 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF 500 (793)
Q Consensus 440 ~qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~ 500 (793)
..|+..++.+.++.| ..+++|||+.||++|++.|++||+|.+.. ..++..||+++.+...
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~-~~~k~~A~~v~~~~~e 261 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSH-QQLKDIATSICEDIFD 261 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSC-HHHHHHCSEEECCGGG
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCcc-HHHHHhhhheeCCCch
Confidence 358877777766533 67999999999999999999999996544 4488999999987443
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.57 E-value=1.6e-07 Score=96.25 Aligned_cols=58 Identities=19% Similarity=0.180 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHhc----CCCeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 440 KQKALVTRLVKTK----TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 440 ~qK~~iv~~lk~~----~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
-.|+..++.+.+. ....|++||||.||.+|++.|++||+|++......+..||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 4698888877765 336899999999999999999999999765534467788988765
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.2e-07 Score=99.22 Aligned_cols=57 Identities=25% Similarity=0.231 Sum_probs=45.8
Q ss_pred hhHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCe--eecc
Q 003824 440 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI--AIAQ 497 (793)
Q Consensus 440 ~qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~--~i~~ 497 (793)
..|+..++.+.++.| +.|++|||+.||++|++.|++||+|.+... .++.+||+ ++.+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~-~vk~~A~~~~v~~s 269 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQ-RLKDLHPELEVIGS 269 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCTTSEECCC
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCH-HHHHhCCCCEeccc
Confidence 359988888876555 679999999999999999999999965544 48889985 4444
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=6e-07 Score=83.98 Aligned_cols=107 Identities=18% Similarity=0.377 Sum_probs=78.1
Q ss_pred cCCccHHHHHHHHHHc-CCEEEeecCceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCc
Q 003824 137 AESPDEAAFVIAAREL-GFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGAD 215 (793)
Q Consensus 137 ~~sp~E~Alv~~a~~~-g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 215 (793)
+++|...|++++|++. |+.+.. .... .....+|++..++..|.+ +| ..+.+|++
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~------------------~~~~--~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~ 103 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERD------------------VQSL--HATFVPFTAQSRMSGINI---DN--RMIRKGSV 103 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCC------------------HHHH--TCEEEEEETTTTEEEEEE---TT--EEEEEEEH
T ss_pred CCCHHHHHHHHHHHHhcCCCccc------------------cccc--ccceeeccccCCCCeEEE---CC--EEEEEeCc
Confidence 5799999999999987 653321 0000 011357888877677744 45 45788999
Q ss_pred hHhHHHHhhcchhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceE
Q 003824 216 SVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLIL 295 (793)
Q Consensus 216 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~ 295 (793)
..|...+...+......+.+.++.++.+|.+++.+| .|..+
T Consensus 104 ~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA---------------------------------------~d~~l 144 (156)
T 1svj_A 104 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSRV 144 (156)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEE---------------------------------------ETTEE
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEE---------------------------------------ECCEE
Confidence 888777765433344457788899999999999999 46789
Q ss_pred EEEEeeecccCC
Q 003824 296 LGATAVEDKLQN 307 (793)
Q Consensus 296 lG~~~ieD~lr~ 307 (793)
+|++++.|++|+
T Consensus 145 ~GvIalaD~iK~ 156 (156)
T 1svj_A 145 LGVIALKDIVKG 156 (156)
T ss_dssp EEEEEEEECCCC
T ss_pred EEEEEEecCCCC
Confidence 999999999996
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.53 E-value=3.3e-07 Score=94.73 Aligned_cols=60 Identities=28% Similarity=0.346 Sum_probs=49.1
Q ss_pred hhHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchhh
Q 003824 440 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF 500 (793)
Q Consensus 440 ~qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~ 500 (793)
..|+..++.+.++.| ..|++|||+.||++|++.|++||+|.+.. ..++.+||++..+...
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~-~~~k~~Ad~v~~~~~e 255 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNAS-EKVQSVADFVTDTVDN 255 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHTCSEECCCTTT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCc-HHHHHhcCEeeCCCCc
Confidence 368888887776654 57999999999999999999999996554 4488999999987443
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.53 E-value=3.3e-07 Score=93.19 Aligned_cols=177 Identities=11% Similarity=0.070 Sum_probs=93.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHc-CccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC-SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~-gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
.+.+.+.++|++|+++| +++++||+....+..+...+ .++..++..+..++.. ... ........+.......+..
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~nGa~i~~~~~~--~~~-~~~~~~~~l~~~~~~~i~~ 98 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICYHGACSKINGQI--VYN-NGSDRFLGVFDRIYEDTRS 98 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEGGGTEEEETTEE--EEC-TTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEECCEEEeeCCee--eec-ccccccchhhHHHHHHHHH
Confidence 46678899999999999 99999999999888887654 3344444443322111 000 0000111122111111111
Q ss_pred HHhhh-hhccccccCCCCCeEEEEeCchhhHhhhh---hHHHHHHHHHhcCCe---eEEEcCChh--hHHHHHHHHHhcC
Q 003824 383 QLIRG-KELLDSSNESLGPLALIIDGKSLTYALED---DVKDLFLELAIGCAS---VICCRSSPK--QKALVTRLVKTKT 453 (793)
Q Consensus 383 ~~~~~-~~~~~~~~~~~~~~~lvi~G~~l~~~~~~---~~~~~~~~l~~~~~~---vi~~r~sP~--qK~~iv~~lk~~~ 453 (793)
.+... ...+.. . .......-..+.....+ .+.+.+... ..... .-+..+.|. .|+..++.+.++.
T Consensus 99 ~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~ 172 (239)
T 1u02_A 99 WVSDFPGLRIYR---K--NLAVLYHLGLMGADMKPKLRSRIEEIARI-FGVETYYGKMIIELRVPGVNKGSAIRSVRGER 172 (239)
T ss_dssp HHHHSTTCEEEE---E--TTEEEEECTTSCSTTHHHHHHHHHHHHHH-HTCEEEECSSEEEEECTTCCHHHHHHHHHTTS
T ss_pred HHhhCCCcEEEe---c--CCEEEEEcCCCChhHHHHHHHHHHHHhcc-CCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhC
Confidence 11110 000000 0 00111111100000001 111212211 11110 012334444 7999999998866
Q ss_pred CCeEEEEcCCccChhhhhhc--ceeEEeccCCcccccccCCeeecc
Q 003824 454 SSTTLAIGDGANDVGMLQEA--DIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 454 ~~~vlaiGDG~ND~~ml~~A--dvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
+ |+++||+.||.+||+.| ++||+|.+. +..||+++.+
T Consensus 173 g--via~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~ 211 (239)
T 1u02_A 173 P--AIIAGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVAD 211 (239)
T ss_dssp C--EEEEESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESS
T ss_pred C--eEEEeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCC
Confidence 7 99999999999999999 999999654 5689998876
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.51 E-value=5.4e-08 Score=101.78 Aligned_cols=62 Identities=19% Similarity=0.252 Sum_probs=48.4
Q ss_pred cCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecch
Q 003824 436 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 498 (793)
Q Consensus 436 r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f 498 (793)
.+.|. .|+..++.+.+..| ..++++||+.||++|++.|++||+|.+.. ...+..||+++.+.
T Consensus 191 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~-~~~~~~a~~v~~~~ 257 (282)
T 1rkq_A 191 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAI-PSVKEVANFVTKSN 257 (282)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECCCT
T ss_pred EecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCc-HHHHhhCCEEecCC
Confidence 44444 79888888766433 57999999999999999999999996543 33677899998763
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=2.6e-07 Score=91.24 Aligned_cols=126 Identities=21% Similarity=0.266 Sum_probs=82.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.++++.|++.|+++.++||+....+..+...+|+...-...+.....
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 128 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG--------------------------- 128 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT---------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECC---------------------------
Confidence 56789999999999999999999999988877777777652100000000000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEc-CChhhHHHHHHHHHhcCC---CeEEE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTKTS---STTLA 459 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r-~sP~qK~~iv~~lk~~~~---~~vla 459 (793)
.++|+ +... ..+..|...+..+.+..| ..+++
T Consensus 129 --------------------~~~~~------------------------~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~ 164 (211)
T 1l7m_A 129 --------------------KLTGD------------------------VEGEVLKENAKGEILEKIAKIEGINLEDTVA 164 (211)
T ss_dssp --------------------EEEEE------------------------EECSSCSTTHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------EEcCC------------------------cccCccCCccHHHHHHHHHHHcCCCHHHEEE
Confidence 00010 1111 123466655555444333 56999
Q ss_pred EcCCccChhhhhhcceeEEeccCCcccccccCCeeecc--hhhHH
Q 003824 460 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLE 502 (793)
Q Consensus 460 iGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~--f~~l~ 502 (793)
+||+.||++|++.|++++++...+ ..+..||+++.+ +..+.
T Consensus 165 iGD~~~Di~~~~~ag~~~~~~~~~--~~~~~a~~v~~~~~~~~l~ 207 (211)
T 1l7m_A 165 VGDGANDISMFKKAGLKIAFCAKP--ILKEKADICIEKRDLREIL 207 (211)
T ss_dssp EECSGGGHHHHHHCSEEEEESCCH--HHHTTCSEEECSSCGGGGG
T ss_pred EecChhHHHHHHHCCCEEEECCCH--HHHhhcceeecchhHHHHH
Confidence 999999999999999999986333 256789999877 55543
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=4.3e-07 Score=88.69 Aligned_cols=98 Identities=12% Similarity=0.117 Sum_probs=72.6
Q ss_pred HHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhc
Q 003824 311 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 390 (793)
Q Consensus 311 ~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (793)
.+|+.|+++|++++++||++...+..+++.+|+..
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~--------------------------------------------- 94 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH--------------------------------------------- 94 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce---------------------------------------------
Confidence 38999999999999999999999999998888631
Q ss_pred cccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC---CeEEEEcCCccCh
Q 003824 391 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAIGDGANDV 467 (793)
Q Consensus 391 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vlaiGDG~ND~ 467 (793)
++... ..|...++.+.+..| ..+++|||+.||+
T Consensus 95 ------------------------------------------~~~~~--kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di 130 (188)
T 2r8e_A 95 ------------------------------------------LYQGQ--SNKLIAFSDLLEKLAIAPENVAYVGDDLIDW 130 (188)
T ss_dssp ------------------------------------------EECSC--SCSHHHHHHHHHHHTCCGGGEEEEESSGGGH
T ss_pred ------------------------------------------eecCC--CCCHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 11111 223333333333223 6799999999999
Q ss_pred hhhhhcceeEEeccCCcccccccCCeeecch
Q 003824 468 GMLQEADIGVGISGVEGMQAVMSSDIAIAQF 498 (793)
Q Consensus 468 ~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f 498 (793)
+|.+.|++++.+.+.. ..++..||+++.+.
T Consensus 131 ~~a~~ag~~~~~~~~~-~~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 131 PVMEKVGLSVAVADAH-PLLIPRADYVTRIA 160 (188)
T ss_dssp HHHTTSSEEEECTTSC-TTTGGGSSEECSSC
T ss_pred HHHHHCCCEEEecCcC-HHHHhcCCEEEeCC
Confidence 9999999999885432 33677899999885
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.40 E-value=2.3e-07 Score=99.40 Aligned_cols=77 Identities=17% Similarity=0.265 Sum_probs=57.2
Q ss_pred ChhhHHHHHHHHHhcC-CCeEEEEcCCccChhhhhhc----ceeEEeccCCcccccccCCeeecch------hhHHHHHH
Q 003824 438 SPKQKALVTRLVKTKT-SSTTLAIGDGANDVGMLQEA----DIGVGISGVEGMQAVMSSDIAIAQF------RFLERLLL 506 (793)
Q Consensus 438 sP~qK~~iv~~lk~~~-~~~vlaiGDG~ND~~ml~~A----dvGI~i~g~~~~~a~~~aD~~i~~f------~~l~~lll 506 (793)
.+.+|+..++.++... ...|+++|||.||++|++.| ++||+| +. ...++..||+++.+. ..|.++ +
T Consensus 204 ~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na-~~~lk~~Ad~v~~~~~~dGV~~~l~~~-~ 280 (332)
T 1y8a_A 204 GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NG-NEYALKHADVVIISPTAMSEAKVIELF-M 280 (332)
T ss_dssp CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SC-CHHHHTTCSEEEECSSTHHHHHHHHHH-H
T ss_pred CCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cC-CHHHHhhCcEEecCCCCCHHHHHHHHH-H
Confidence 3678998888665411 14599999999999999999 999999 54 334788999998762 225554 6
Q ss_pred HhhhhHHhHhhH
Q 003824 507 VHGHWCYRRISS 518 (793)
Q Consensus 507 ~~GR~~~~~i~~ 518 (793)
..||..+ ++-+
T Consensus 281 ~~~~~~~-~~~~ 291 (332)
T 1y8a_A 281 ERKERAF-EVLS 291 (332)
T ss_dssp HHGGGGG-GGGG
T ss_pred HcCCchh-HHHH
Confidence 7888777 5444
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.39 E-value=1.2e-07 Score=99.95 Aligned_cols=57 Identities=16% Similarity=0.257 Sum_probs=46.7
Q ss_pred hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeec-ch
Q 003824 441 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA-QF 498 (793)
Q Consensus 441 qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~-~f 498 (793)
.|+..++.+.+..| ..+++|||+.||.+|++.|++||+|.+... ..+..||+++. +.
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~~ 284 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATD-SAKSHAKCVLPVSH 284 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCH-HHHHHSSEECSSCT
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcH-HHHhhCCEEEccCC
Confidence 69988888776544 579999999999999999999999965433 36778999987 53
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.38 E-value=5.7e-07 Score=89.09 Aligned_cols=133 Identities=17% Similarity=0.246 Sum_probs=85.6
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHH
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQL 384 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (793)
+.+++.+.++.|++.|+++.++|+.....+..+...+|+.... .+..
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~------------------------------- 129 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN--IFAV------------------------------- 129 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG--EEEE-------------------------------
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc--EEEe-------------------------------
Confidence 7899999999999999999999999999999999888874211 0000
Q ss_pred hhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCc
Q 003824 385 IRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGA 464 (793)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ 464 (793)
.+++++.... ..+.....+|..|...+..........+++|||+.
T Consensus 130 -----------------~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~ 174 (219)
T 3kd3_A 130 -----------------ETIWNSDGSF------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGY 174 (219)
T ss_dssp -----------------EEEECTTSBE------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESSH
T ss_pred -----------------eeeecCCCce------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEECCH
Confidence 0011000000 00112234455665555443222567899999999
Q ss_pred cChhhhhh--cceeEEecc-CCcccccccCCeeecchhhHHHHH
Q 003824 465 NDVGMLQE--ADIGVGISG-VEGMQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 465 ND~~ml~~--AdvGI~i~g-~~~~~a~~~aD~~i~~f~~l~~ll 505 (793)
||++|+++ +.++|+... +.....+..||+++.++..+..+|
T Consensus 175 ~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 175 TDYQLYEKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp HHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred hHHHHHhCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 99999965 224554432 222235677999999988887764
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.37 E-value=5.7e-07 Score=89.34 Aligned_cols=129 Identities=19% Similarity=0.238 Sum_probs=87.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
-++.+++.+.++.|++.|++++++|+.....+..+...+|+...-...+.....
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-------------------------- 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEND-------------------------- 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCC--------------------------
Confidence 358999999999999999999999999999888888888874311111111000
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEc-CChhhHHHHHHHHHhcC---CCeEE
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTKT---SSTTL 458 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r-~sP~qK~~iv~~lk~~~---~~~vl 458 (793)
.++| .+... ..+..|..+++.+.+.. ...++
T Consensus 128 ---------------------~~~~------------------------~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i 162 (217)
T 3m1y_A 128 ---------------------ALNG------------------------LVTGHMMFSHSKGEMLLVLQRLLNISKTNTL 162 (217)
T ss_dssp ---------------------EEEE------------------------EEEESCCSTTHHHHHHHHHHHHHTCCSTTEE
T ss_pred ---------------------EEEe------------------------eeccCCCCCCChHHHHHHHHHHcCCCHhHEE
Confidence 0000 01111 12345666665554432 36799
Q ss_pred EEcCCccChhhhhhcceeEEeccCCcccccccCCeeecch--hhHHHH
Q 003824 459 AIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF--RFLERL 504 (793)
Q Consensus 459 aiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f--~~l~~l 504 (793)
+|||+.||++|.+.|++++++...+ ..+..||+++.+. ..+.++
T Consensus 163 ~vGDs~~Di~~a~~aG~~~~~~~~~--~l~~~ad~v~~~~dl~~~~~~ 208 (217)
T 3m1y_A 163 VVGDGANDLSMFKHAHIKIAFNAKE--VLKQHATHCINEPDLALIKPL 208 (217)
T ss_dssp EEECSGGGHHHHTTCSEEEEESCCH--HHHTTCSEEECSSBGGGGTTC
T ss_pred EEeCCHHHHHHHHHCCCeEEECccH--HHHHhcceeecccCHHHHHHH
Confidence 9999999999999999999993333 3678899999864 334444
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.33 E-value=2.2e-06 Score=88.76 Aligned_cols=59 Identities=20% Similarity=0.174 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchh
Q 003824 440 KQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 499 (793)
Q Consensus 440 ~qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~ 499 (793)
..|...++.+.+..| ..+++|||+.||.+|++.|++||+|.+.. ...+..||+++.+..
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~-~~~k~~a~~v~~~~~ 251 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAA-ENIKQIARYATDDNN 251 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCC-HHHHHHCSEECCCGG
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCcc-HHHHHhCCeeCcCCC
Confidence 378888888776544 57999999999999999999999996543 336788999987643
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.32 E-value=9.9e-07 Score=97.53 Aligned_cols=136 Identities=20% Similarity=0.215 Sum_probs=92.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.||+.+.++.|++.|+++.++||.....+..++..+|+...-...+.+...
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg--------------------------- 308 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG--------------------------- 308 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT---------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC---------------------------
Confidence 79999999999999999999999999999999999999983211000000000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC---CeEEEE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAI 460 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vlai 460 (793)
.++|... ..-..++.|..+++.+.+..| ..+++|
T Consensus 309 --------------------~~tg~~~-----------------------~~v~~~kpk~~~~~~~~~~~gi~~~~~i~v 345 (415)
T 3p96_A 309 --------------------TLTGRVV-----------------------GPIIDRAGKATALREFAQRAGVPMAQTVAV 345 (415)
T ss_dssp --------------------EEEEEEC-----------------------SSCCCHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------------EEEeeEc-----------------------cCCCCCcchHHHHHHHHHHcCcChhhEEEE
Confidence 1111100 001235667777666655433 679999
Q ss_pred cCCccChhhhhhcceeEEeccCCcccccccCCeeecc--hhhHHHHHHHhhhhH
Q 003824 461 GDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHGHWC 512 (793)
Q Consensus 461 GDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~--f~~l~~lll~~GR~~ 512 (793)
|||.||++|++.|++|+++.+.+ ..+..||+++.. ...+..+ +-.+|.-
T Consensus 346 GD~~~Di~~a~~aG~~va~~~~~--~~~~~ad~~i~~~~l~~ll~~-l~~~~~~ 396 (415)
T 3p96_A 346 GDGANDIDMLAAAGLGIAFNAKP--ALREVADASLSHPYLDTVLFL-LGVTRGE 396 (415)
T ss_dssp ECSGGGHHHHHHSSEEEEESCCH--HHHHHCSEEECSSCTTHHHHH-TTCCHHH
T ss_pred ECCHHHHHHHHHCCCeEEECCCH--HHHHhCCEEEccCCHHHHHHH-hCCCHHH
Confidence 99999999999999999994433 367889999875 3334444 3334433
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=3.4e-06 Score=86.70 Aligned_cols=54 Identities=15% Similarity=0.239 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHhcCC-----CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 440 KQKALVTRLVKTKTS-----STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 440 ~qK~~iv~~lk~~~~-----~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
..|...++.+.+..+ ..++++||+.||.+|++.|++||+|.+... . +++++..+
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~--~~~~~~~~ 233 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--P--EGVLATPA 233 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--C--TTCEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--c--CCcEEeCC
Confidence 588988888877554 679999999999999999999999977655 2 67888765
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=1.7e-06 Score=85.26 Aligned_cols=128 Identities=20% Similarity=0.126 Sum_probs=86.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccC--ceEEEEccCCCcccccchhhhHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQG--MRQVIISSETPESKTLEKSEDKSAAAAALKASVL 381 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (793)
++.+++.+.++.|++.|++++++|+.....+..+...+|+...- ..
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~-------------------------------- 117 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD-------------------------------- 117 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGG--------------------------------
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcce--------------------------------
Confidence 57799999999999999999999999988888888888763211 00
Q ss_pred HHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEc
Q 003824 382 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 461 (793)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 461 (793)
+++++. ....-.|.--..+.+.+.- ....+++||
T Consensus 118 ----------------------i~~~~~-----------------------~~~kp~~~~~~~~~~~~g~-~~~~~i~iG 151 (205)
T 3m9l_A 118 ----------------------VLGRDE-----------------------APPKPHPGGLLKLAEAWDV-SPSRMVMVG 151 (205)
T ss_dssp ----------------------EECTTT-----------------------SCCTTSSHHHHHHHHHTTC-CGGGEEEEE
T ss_pred ----------------------EEeCCC-----------------------CCCCCCHHHHHHHHHHcCC-CHHHEEEEC
Confidence 111000 0000011111122222221 336799999
Q ss_pred CCccChhhhhhcce-eEEeccCCcccccccCCeeecchhhHHHHHHHhhh
Q 003824 462 DGANDVGMLQEADI-GVGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGH 510 (793)
Q Consensus 462 DG~ND~~ml~~Adv-GI~i~g~~~~~a~~~aD~~i~~f~~l~~lll~~GR 510 (793)
|+.||+.|.+.|++ +|++.+... ..+..||+++.++..|..++=.+++
T Consensus 152 D~~~Di~~a~~aG~~~i~v~~~~~-~~~~~ad~v~~~~~el~~~~~~~~~ 200 (205)
T 3m9l_A 152 DYRFDLDCGRAAGTRTVLVNLPDN-PWPELTDWHARDCAQLRDLLSAEGH 200 (205)
T ss_dssp SSHHHHHHHHHHTCEEEECSSSSC-SCGGGCSEECSSHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCEEEEEeCCCC-cccccCCEEeCCHHHHHHHHHhccc
Confidence 99999999999999 999965443 3567899999999888887433333
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.29 E-value=1.3e-06 Score=92.73 Aligned_cols=120 Identities=18% Similarity=0.189 Sum_probs=82.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.||+.++++.|+++|+++.++||.....+..+.+.+|+...-...+...+.
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg--------------------------- 231 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDN--------------------------- 231 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETT---------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCC---------------------------
Confidence 48999999999999999999999999999999999999984211111111100
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEc-CChhhHHHHHHHHHhcC---CCeEEE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCR-SSPKQKALVTRLVKTKT---SSTTLA 459 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r-~sP~qK~~iv~~lk~~~---~~~vla 459 (793)
.++|. +... ..++.|..+++.+.+.. ...+++
T Consensus 232 --------------------~~tg~------------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~ 267 (317)
T 4eze_A 232 --------------------VLTDN------------------------ITLPIMNAANKKQTLVDLAARLNIATENIIA 267 (317)
T ss_dssp --------------------EEEEE------------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------eeeee------------------------EecccCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence 00110 1111 13455655555544432 367999
Q ss_pred EcCCccChhhhhhcceeEEeccCCcccccccCCeeec
Q 003824 460 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA 496 (793)
Q Consensus 460 iGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~ 496 (793)
|||+.||++|.+.|++|+++.+.+. .+..+|.++.
T Consensus 268 VGDs~~Di~aa~~AG~~va~~~~~~--~~~~a~~~i~ 302 (317)
T 4eze_A 268 CGDGANDLPMLEHAGTGIAWKAKPV--VREKIHHQIN 302 (317)
T ss_dssp EECSGGGHHHHHHSSEEEEESCCHH--HHHHCCEEES
T ss_pred EeCCHHHHHHHHHCCCeEEeCCCHH--HHHhcCeeeC
Confidence 9999999999999999999943333 5677888765
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.27 E-value=9.9e-07 Score=88.91 Aligned_cols=128 Identities=23% Similarity=0.260 Sum_probs=84.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.+.++.|++.|++++++|+.....+..+....|+...-..
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 149 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV---------------------------------- 149 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE----------------------------------
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee----------------------------------
Confidence 5789999999999999999999999998888888888776421110
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
++.++... ...-.|+--..+.+.+.- ....+++|||+
T Consensus 150 --------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~lg~-~~~~~i~vGD~ 186 (237)
T 4ex6_A 150 --------------------IAGDDSVE----------------------RGKPHPDMALHVARGLGI-PPERCVVIGDG 186 (237)
T ss_dssp --------------------EECTTTSS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEESS
T ss_pred --------------------EEeCCCCC----------------------CCCCCHHHHHHHHHHcCC-CHHHeEEEcCC
Confidence 11111100 000111111223333322 34679999999
Q ss_pred ccChhhhhhcce---eEEeccCCcccccc-cCCeeecchhhHHHHHHHhh
Q 003824 464 ANDVGMLQEADI---GVGISGVEGMQAVM-SSDIAIAQFRFLERLLLVHG 509 (793)
Q Consensus 464 ~ND~~ml~~Adv---GI~i~g~~~~~a~~-~aD~~i~~f~~l~~lll~~G 509 (793)
.||+.|.+.|++ +|++.+......+. .+|+++.++..+..+ +..|
T Consensus 187 ~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~-l~~~ 235 (237)
T 4ex6_A 187 VPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA-VLDG 235 (237)
T ss_dssp HHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH-HHHC
T ss_pred HHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH-HHcc
Confidence 999999999999 66654332222333 799999999888877 4444
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.27 E-value=5.2e-06 Score=83.78 Aligned_cols=182 Identities=12% Similarity=0.141 Sum_probs=93.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccc----cCceEEEEccCCCcccccchhhhHHHHHHHHHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR----QGMRQVIISSETPESKTLEKSEDKSAAAAALKA 378 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (793)
..+.+.+.++|++|+++|++++++||+....+..+...+|+-. .++..+..++.......+ ....+.+ +...
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l--~~~~~i~-~~~~- 94 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASM--DEEWILW-NEIR- 94 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCC--SHHHHHH-HHHH-
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccH--HHHHHHH-HHHH-
Confidence 3467788999999999999999999999999999988887522 122111111110000011 1111111 1110
Q ss_pred HHHHHHhhhhhc-cccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCee---EEEcCCh--hhHHHHHHHHHhc
Q 003824 379 SVLHQLIRGKEL-LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASV---ICCRSSP--KQKALVTRLVKTK 452 (793)
Q Consensus 379 ~~~~~~~~~~~~-~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~v---i~~r~sP--~qK~~iv~~lk~~ 452 (793)
.+.. +... ..... .... +.+-+... ..+........+......+ .+....| ..|...++.+.+.
T Consensus 95 ---~~~~-~~~~~~~~~~-~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~ 164 (231)
T 1wr8_A 95 ---KRFP-NARTSYTMPD-RRAG--LVIMRETI---NVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEF 164 (231)
T ss_dssp ---HHCT-TCCBCTTGGG-CSSC--EEECTTTS---CHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHH
T ss_pred ---HhCC-CceEEecCCC-ceee--EEEECCCC---CHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHH
Confidence 0000 0000 00000 0001 12211000 0111111111111111111 0112223 3688777777654
Q ss_pred CC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchh
Q 003824 453 TS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 499 (793)
Q Consensus 453 ~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~ 499 (793)
.| ..+++|||+.||.+|++.|++||++.+.. ...+..||+++.+..
T Consensus 165 ~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~-~~~~~~a~~v~~~~~ 213 (231)
T 1wr8_A 165 LGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAP-KILKENADYVTKKEY 213 (231)
T ss_dssp HTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHTTCSEECSSCH
T ss_pred cCCCHHHEEEECCCHHHHHHHHHcCCeEEecCCC-HHHHhhCCEEecCCC
Confidence 33 57999999999999999999999986543 335678999987643
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.23 E-value=4.4e-06 Score=82.99 Aligned_cols=124 Identities=11% Similarity=0.095 Sum_probs=79.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.+.++.|++.|++++++|+.....+..+....|+...-..
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~---------------------------------- 139 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDA---------------------------------- 139 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcE----------------------------------
Confidence 4578999999999999999999999988777777776665321111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
++.+.... ...-.|.--..+.+.+.- ....+++|||+
T Consensus 140 --------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~~~i-~~~~~i~iGD~ 176 (226)
T 1te2_A 140 --------------------LASAEKLP----------------------YSKPHPQVYLDCAAKLGV-DPLTCVALEDS 176 (226)
T ss_dssp --------------------EEECTTSS----------------------CCTTSTHHHHHHHHHHTS-CGGGEEEEESS
T ss_pred --------------------EEeccccC----------------------CCCCChHHHHHHHHHcCC-CHHHeEEEeCC
Confidence 11110000 000011111223333322 34679999999
Q ss_pred ccChhhhhhcceeEEeccCC---cccccccCCeeecchhhHHHH
Q 003824 464 ANDVGMLQEADIGVGISGVE---GMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 464 ~ND~~ml~~AdvGI~i~g~~---~~~a~~~aD~~i~~f~~l~~l 504 (793)
.||+.|++.|++++++-... ....+..||+++.++..+..-
T Consensus 177 ~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 177 VNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp HHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHH
T ss_pred HHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHH
Confidence 99999999999999772221 112467899999998776554
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.21 E-value=1.2e-05 Score=83.91 Aligned_cols=59 Identities=22% Similarity=0.243 Sum_probs=47.1
Q ss_pred hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchhh
Q 003824 441 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF 500 (793)
Q Consensus 441 qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~ 500 (793)
.|+..++.+.+..| ..+++|||+.||++|++.|++||+|.+.. ...+..||+++.+...
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~-~~~~~~a~~v~~~~~~ 277 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAR-EDIKSIADAVTLTNDE 277 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCC-HHHHHHCSEECCCGGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCC-HHHHhhCceeecCCCc
Confidence 68888887776544 57999999999999999999999996543 3467789999876443
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.21 E-value=3e-07 Score=95.24 Aligned_cols=58 Identities=22% Similarity=0.337 Sum_probs=46.2
Q ss_pred hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchh
Q 003824 441 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 499 (793)
Q Consensus 441 qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~ 499 (793)
.|+..++.+.+..| ..+++|||+.||++|++.|++||+|.+.. ...+..||+++.+..
T Consensus 190 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~-~~~~~~a~~v~~~~~ 250 (268)
T 1nf2_A 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAI-EKVKEASDIVTLTNN 250 (268)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSC-HHHHHHCSEECCCTT
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCC-HHHHhhCCEEEccCC
Confidence 78888887766433 67999999999999999999999996543 336778999987633
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.20 E-value=1.9e-06 Score=88.67 Aligned_cols=63 Identities=24% Similarity=0.357 Sum_probs=49.6
Q ss_pred hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchhh--HHHH
Q 003824 441 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF--LERL 504 (793)
Q Consensus 441 qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~--l~~l 504 (793)
.|...++.+.++.| ..+++|||+.||++|++.|++|+++.+.. ...+..||+++.+... +.++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~-~~~~~~a~~v~~~~~~dGv~~~ 254 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAK-EDVKAAADYVTAPIDEDGISKA 254 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHSSEECCCGGGTHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCcc-HHHHhhCCEEeccCchhhHHHH
Confidence 68877777765433 57999999999999999999999995443 3467889999988666 6655
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.16 E-value=1e-05 Score=79.65 Aligned_cols=125 Identities=19% Similarity=0.153 Sum_probs=87.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.++++.|++. +++.++|+.....+..+...+|+...-...+.....
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~--------------------------- 120 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS--------------------------- 120 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTT---------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCC---------------------------
Confidence 5789999999999999 999999999999999999988874210000110000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
. .....-.-.|..|...++.+.. ....+++|||+
T Consensus 121 --------------------------~-------------------~~~~~~~p~p~~~~~~l~~l~~-~~~~~~~iGD~ 154 (206)
T 1rku_A 121 --------------------------D-------------------RVVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDS 154 (206)
T ss_dssp --------------------------S-------------------CEEEEECCSSSHHHHHHHHHHH-TTCEEEEEECS
T ss_pred --------------------------c-------------------eEEeeecCCCchHHHHHHHHHh-cCCEEEEEeCC
Confidence 0 0000112567888888888876 67799999999
Q ss_pred ccChhhhhhcceeEEeccCCcccccc-cCCee-ecchhhHHHH
Q 003824 464 ANDVGMLQEADIGVGISGVEGMQAVM-SSDIA-IAQFRFLERL 504 (793)
Q Consensus 464 ~ND~~ml~~AdvGI~i~g~~~~~a~~-~aD~~-i~~f~~l~~l 504 (793)
.||+.|.+.|++++.+...+. .+. +++++ +.++..+..+
T Consensus 155 ~~Di~~a~~aG~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 195 (206)
T 1rku_A 155 YNDTTMLSEAHAGILFHAPEN--VIREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp STTHHHHHHSSEEEEESCCHH--HHHHCTTSCEECSHHHHHHH
T ss_pred hhhHHHHHhcCccEEECCcHH--HHHHHhhhccccchHHHHHH
Confidence 999999999999998743322 333 45554 6666666655
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.15 E-value=3e-06 Score=84.80 Aligned_cols=130 Identities=19% Similarity=0.225 Sum_probs=86.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.|++.++++.|+++|++++++||.....+..+.+.+|+.... .+. ..
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~--~f~--~~--------------------------- 134 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFA--NR--------------------------- 134 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEE--EC---------------------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc--EEe--ee---------------------------
Confidence 68999999999999999999999999999999999999874210 100 00
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcC-----ChhhHHHHHHHHHhcCC-CeE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRS-----SPKQKALVTRLVKTKTS-STT 457 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~-----sP~qK~~iv~~lk~~~~-~~v 457 (793)
+..+.. ..+..... .+..|..+++.+.+..| ..+
T Consensus 135 -------------------~~~~~~---------------------~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~ 174 (225)
T 1nnl_A 135 -------------------LKFYFN---------------------GEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKI 174 (225)
T ss_dssp -------------------EEECTT---------------------SCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSCE
T ss_pred -------------------EEEcCC---------------------CcEecCCCCCcccCCCchHHHHHHHHHHcCCCcE
Confidence 000000 00011111 12356555555544333 679
Q ss_pred EEEcCCccChhhhhhcceeEEeccCCc-ccccccCCeeecchhhHHHH
Q 003824 458 LAIGDGANDVGMLQEADIGVGISGVEG-MQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 458 laiGDG~ND~~ml~~AdvGI~i~g~~~-~~a~~~aD~~i~~f~~l~~l 504 (793)
++|||+.||+.|.+.|+++|++..... ......+|+++.++..+..+
T Consensus 175 ~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (225)
T 1nnl_A 175 IMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGE 222 (225)
T ss_dssp EEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC-
T ss_pred EEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHH
Confidence 999999999999999999888854321 11334689999988776554
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.13 E-value=2.9e-06 Score=84.71 Aligned_cols=120 Identities=18% Similarity=0.115 Sum_probs=83.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.+.++.|++.|+++.++|+.....+..+....|+...-..
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 131 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDA---------------------------------- 131 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheee----------------------------------
Confidence 5789999999999999999999999988888888888776421111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCC--hhhHHHHHHHHHhc---CCCeEE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS--PKQKALVTRLVKTK---TSSTTL 458 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~s--P~qK~~iv~~lk~~---~~~~vl 458 (793)
++.+... ..-|..+++.+.+. ....++
T Consensus 132 ------------------------------------------------~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i 163 (226)
T 3mc1_A 132 ------------------------------------------------IVGSSLDGKLSTKEDVIRYAMESLNIKSDDAI 163 (226)
T ss_dssp ------------------------------------------------EEEECTTSSSCSHHHHHHHHHHHHTCCGGGEE
T ss_pred ------------------------------------------------eeccCCCCCCCCCHHHHHHHHHHhCcCcccEE
Confidence 1111111 12233333333332 236899
Q ss_pred EEcCCccChhhhhhcce---eEEeccCCccc-ccccCCeeecchhhHHHHH
Q 003824 459 AIGDGANDVGMLQEADI---GVGISGVEGMQ-AVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 459 aiGDG~ND~~ml~~Adv---GI~i~g~~~~~-a~~~aD~~i~~f~~l~~ll 505 (793)
+|||+.||+.|.+.|++ +|+++...... .+..||+++.++..+..++
T Consensus 164 ~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 164 MIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp EEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred EECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 99999999999999999 55443222211 1478999999999988874
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.12 E-value=1e-05 Score=81.28 Aligned_cols=41 Identities=15% Similarity=0.025 Sum_probs=38.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57999999999999999999999999999999999999974
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.10 E-value=4.1e-06 Score=79.27 Aligned_cols=106 Identities=14% Similarity=0.072 Sum_probs=75.7
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHH
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQL 384 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (793)
+.+++.++|+.|+++|++++++||.....+..+.+.+|+..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------------- 77 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------------- 77 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------------------
Confidence 45667899999999999999999999999999998888631
Q ss_pred hhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHH-HHHhc--CCCeEEEEc
Q 003824 385 IRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTR-LVKTK--TSSTTLAIG 461 (793)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~-~lk~~--~~~~vlaiG 461 (793)
.++ . +..|...++ .+++. ..+.+++||
T Consensus 78 -------------------~~~-----------------------------~--~kp~~~~~~~~~~~~~~~~~~~~~vG 107 (162)
T 2p9j_A 78 -------------------IYT-----------------------------G--SYKKLEIYEKIKEKYSLKDEEIGFIG 107 (162)
T ss_dssp -------------------EEE-----------------------------C--C--CHHHHHHHHHHTTCCGGGEEEEE
T ss_pred -------------------hcc-----------------------------C--CCCCHHHHHHHHHHcCCCHHHEEEEC
Confidence 000 0 111222222 22221 336799999
Q ss_pred CCccChhhhhhcceeEEeccCCcccccccCCeeecchhh
Q 003824 462 DGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF 500 (793)
Q Consensus 462 DG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~ 500 (793)
|+.||+.|.+.|++++.+.+.. ...+..||+++.+...
T Consensus 108 D~~~Di~~a~~ag~~~~~~~~~-~~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 108 DDVVDIEVMKKVGFPVAVRNAV-EEVRKVAVYITQRNGG 145 (162)
T ss_dssp CSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECSSCSS
T ss_pred CCHHHHHHHHHCCCeEEecCcc-HHHHhhCCEEecCCCC
Confidence 9999999999999998874332 2356789999987543
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.08 E-value=3.3e-05 Score=80.12 Aligned_cols=40 Identities=8% Similarity=0.078 Sum_probs=36.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
.+-+.+.++|++|+++|++++++||+....+..+...+++
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 65 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 65 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 3557789999999999999999999999999999988875
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=1.4e-05 Score=81.35 Aligned_cols=58 Identities=21% Similarity=0.311 Sum_probs=45.2
Q ss_pred hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCccccccc-------CCeeecchh
Q 003824 441 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMS-------SDIAIAQFR 499 (793)
Q Consensus 441 qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~-------aD~~i~~f~ 499 (793)
.|+..++.+.+..| ..++++||+.||.+|++.|++||+|.+.. ...+.. ||++..+..
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~-~~~k~~a~~~~~~a~~v~~~~~ 229 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQ-PELLHWYDQWGDSRHYRAQSSH 229 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCC-HHHHHHHHHHCCTTEEECSSCH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCc-HHHHHHHhcccccceeecCCcc
Confidence 68888888776544 57999999999999999999999996443 335554 788887633
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.01 E-value=7.5e-06 Score=79.88 Aligned_cols=118 Identities=19% Similarity=0.194 Sum_probs=76.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
.+.+++.+.++.|++.|++++++|+....... .....|+...-
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f------------------------------------ 127 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF------------------------------------ 127 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE------------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe------------------------------------
Confidence 46899999999999999999999999877766 66655543210
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
..++.+... -...-.|+--..+.+.+.- ....+++|||+
T Consensus 128 ------------------~~~~~~~~~----------------------~~~Kp~~~~~~~~~~~~~i-~~~~~~~iGD~ 166 (207)
T 2go7_A 128 ------------------TEILTSQSG----------------------FVRKPSPEAATYLLDKYQL-NSDNTYYIGDR 166 (207)
T ss_dssp ------------------EEEECGGGC----------------------CCCTTSSHHHHHHHHHHTC-CGGGEEEEESS
T ss_pred ------------------eeEEecCcC----------------------CCCCCCcHHHHHHHHHhCC-CcccEEEECCC
Confidence 001111000 0000111111233343332 34679999999
Q ss_pred ccChhhhhhccee-EEeccCCcccccccCCeeecchhhHHHH
Q 003824 464 ANDVGMLQEADIG-VGISGVEGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 464 ~ND~~ml~~AdvG-I~i~g~~~~~a~~~aD~~i~~f~~l~~l 504 (793)
.||+.|++.|+++ |++.+.. . .+|+++.++..+..+
T Consensus 167 ~nDi~~~~~aG~~~i~~~~~~-~----~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 167 TLDVEFAQNSGIQSINFLEST-Y----EGNHRIQALADISRI 203 (207)
T ss_dssp HHHHHHHHHHTCEEEESSCCS-C----TTEEECSSTTHHHHH
T ss_pred HHHHHHHHHCCCeEEEEecCC-C----CCCEEeCCHHHHHHH
Confidence 9999999999998 6775433 2 689999888777665
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.01 E-value=1e-05 Score=82.09 Aligned_cols=125 Identities=20% Similarity=0.184 Sum_probs=81.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
-++.+++.++++.|++.|++++++|+.....+..+...+|+...-..
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 159 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE--------------------------------- 159 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEE---------------------------------
Confidence 35789999999999999999999999999888888888887431110
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcC
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 462 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 462 (793)
++.+.... ...-.|+--..+.+.+.- ....+++|||
T Consensus 160 ---------------------~~~~~~~~----------------------~~Kp~~~~~~~~~~~~~~-~~~~~~~vGD 195 (243)
T 2hsz_A 160 ---------------------MLGGQSLP----------------------EIKPHPAPFYYLCGKFGL-YPKQILFVGD 195 (243)
T ss_dssp ---------------------EECTTTSS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEES
T ss_pred ---------------------EEecccCC----------------------CCCcCHHHHHHHHHHhCc-ChhhEEEEcC
Confidence 11111000 000112222233333322 3467999999
Q ss_pred CccChhhhhhcceeE-EeccC---CcccccccCCeeecchhhHHHH
Q 003824 463 GANDVGMLQEADIGV-GISGV---EGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 463 G~ND~~ml~~AdvGI-~i~g~---~~~~a~~~aD~~i~~f~~l~~l 504 (793)
+.||+.|.+.|++++ ++... ........+|+++.++..+..+
T Consensus 196 ~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~ 241 (243)
T 2hsz_A 196 SQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 241 (243)
T ss_dssp SHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred CHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHH
Confidence 999999999999985 44321 1122356789999887766543
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.01 E-value=1e-05 Score=80.17 Aligned_cols=40 Identities=10% Similarity=0.032 Sum_probs=34.6
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
+.+++.+.++.|++.|++++++|+.....+..+....|+.
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 4689999999999999999999999888777777777653
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.00 E-value=1.4e-05 Score=78.48 Aligned_cols=124 Identities=10% Similarity=0.055 Sum_probs=82.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.+.++.|++.|++++++|+.....+..+....|+...-..
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 134 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDI---------------------------------- 134 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheee----------------------------------
Confidence 4789999999999999999999999998888888888887432111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
++.+.... ...-.|.--..+.+.+.- ....+++|||+
T Consensus 135 --------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~~~~-~~~~~~~iGD~ 171 (214)
T 3e58_A 135 --------------------VLSGEEFK----------------------ESKPNPEIYLTALKQLNV-QASRALIIEDS 171 (214)
T ss_dssp --------------------EEEGGGCS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEECS
T ss_pred --------------------Eeeccccc----------------------CCCCChHHHHHHHHHcCC-ChHHeEEEecc
Confidence 11111000 000111111233333322 34679999999
Q ss_pred ccChhhhhhcceeEEeccCC-cccccccCCeeecchhhHHHH
Q 003824 464 ANDVGMLQEADIGVGISGVE-GMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 464 ~ND~~ml~~AdvGI~i~g~~-~~~a~~~aD~~i~~f~~l~~l 504 (793)
.||+.|.+.|++++.+.+.. .......+|+++.++..+..+
T Consensus 172 ~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 172 EKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDL 213 (214)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGGG
T ss_pred HhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHhh
Confidence 99999999999988653331 222347899999988776543
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.99 E-value=1.5e-05 Score=79.61 Aligned_cols=125 Identities=18% Similarity=0.146 Sum_probs=83.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 128 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDL--------------------------------- 128 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheE---------------------------------
Confidence 35789999999999999999999999988888888888886421110
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcC
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 462 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 462 (793)
++.+... ....-.|+--..+.+.+.- ....+++|||
T Consensus 129 ---------------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~~~~-~~~~~~~vGD 164 (222)
T 2nyv_A 129 ---------------------IVGGDTF----------------------GEKKPSPTPVLKTLEILGE-EPEKALIVGD 164 (222)
T ss_dssp ---------------------EECTTSS----------------------CTTCCTTHHHHHHHHHHTC-CGGGEEEEES
T ss_pred ---------------------EEecCcC----------------------CCCCCChHHHHHHHHHhCC-CchhEEEECC
Confidence 1111100 0001112222233333322 3467999999
Q ss_pred CccChhhhhhccee-EEecc-CCcccccccCCeeecchhhHHHHH
Q 003824 463 GANDVGMLQEADIG-VGISG-VEGMQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 463 G~ND~~ml~~AdvG-I~i~g-~~~~~a~~~aD~~i~~f~~l~~ll 505 (793)
+.||+.|.+.|+++ |++.. ...... ..+|+++.++..+..++
T Consensus 165 ~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 165 TDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp SHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred CHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHH
Confidence 99999999999998 66643 222212 67899999988887764
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.98 E-value=6.1e-06 Score=82.55 Aligned_cols=41 Identities=22% Similarity=0.146 Sum_probs=36.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+++.+.++.|++.|++++++|+.....+..+....|+.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 131 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLD 131 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCC
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchh
Confidence 46799999999999999999999999988888888887764
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.7e-05 Score=79.33 Aligned_cols=126 Identities=11% Similarity=0.022 Sum_probs=84.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 144 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDH--------------------------------- 144 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSE---------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCE---------------------------------
Confidence 35789999999999999999999999998888888888776432111
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcC
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 462 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 462 (793)
++.+.... ...-.|.--..+.+.+.- ....+++|||
T Consensus 145 ---------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~~~~-~~~~~~~vGD 180 (233)
T 3umb_A 145 ---------------------VLSVDAVR----------------------LYKTAPAAYALAPRAFGV-PAAQILFVSS 180 (233)
T ss_dssp ---------------------EEEGGGTT----------------------CCTTSHHHHTHHHHHHTS-CGGGEEEEES
T ss_pred ---------------------EEEecccC----------------------CCCcCHHHHHHHHHHhCC-CcccEEEEeC
Confidence 11111000 000111111223333322 3467999999
Q ss_pred CccChhhhhhcceeEEec---cCCcccccccCCeeecchhhHHHHH
Q 003824 463 GANDVGMLQEADIGVGIS---GVEGMQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 463 G~ND~~ml~~AdvGI~i~---g~~~~~a~~~aD~~i~~f~~l~~ll 505 (793)
+.||+.|.+.|++++.+- +......+..+|+++.++..+..+|
T Consensus 181 ~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 181 NGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp CHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred CHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 999999999999999772 2222224567999999999888874
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.97 E-value=7.3e-06 Score=82.74 Aligned_cols=121 Identities=17% Similarity=0.142 Sum_probs=81.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
-++.+++.++++.|++.|++++++|+.....+..+...+|+...-..+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 156 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYI-------------------------------- 156 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEE--------------------------------
Confidence 357899999999999999999999999888888888888764321111
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCC--hhhHHHHHHHHHhc---C-CCe
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSS--PKQKALVTRLVKTK---T-SST 456 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~s--P~qK~~iv~~lk~~---~-~~~ 456 (793)
+++... +.-|..+++.+.+. . ...
T Consensus 157 --------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 186 (240)
T 3sd7_A 157 --------------------------------------------------AGSNLDGTRVNKNEVIQYVLDLCNVKDKDK 186 (240)
T ss_dssp --------------------------------------------------EEECTTSCCCCHHHHHHHHHHHHTCCCGGG
T ss_pred --------------------------------------------------EeccccCCCCCCHHHHHHHHHHcCCCCCCc
Confidence 111111 11233333332222 3 567
Q ss_pred EEEEcCCccChhhhhhcceeE-Eec-cCCccc--ccccCCeeecchhhHHHHH
Q 003824 457 TLAIGDGANDVGMLQEADIGV-GIS-GVEGMQ--AVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 457 vlaiGDG~ND~~ml~~AdvGI-~i~-g~~~~~--a~~~aD~~i~~f~~l~~ll 505 (793)
+++|||+.||+.|.+.|++.. ++. |..... .+..+|+++.++..+..+|
T Consensus 187 ~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 187 VIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp EEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred EEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 999999999999999999833 332 222111 2367999999998887764
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.97 E-value=6.6e-06 Score=89.24 Aligned_cols=40 Identities=8% Similarity=0.193 Sum_probs=38.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.|++.+.|+.|+++|++|+|+||.....+..+|.++|+
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 4789999999999999999999999999999999999986
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.95 E-value=2.1e-05 Score=78.52 Aligned_cols=125 Identities=15% Similarity=0.064 Sum_probs=82.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
-++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 141 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDH--------------------------------- 141 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSE---------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcce---------------------------------
Confidence 35789999999999999999999999998888888777776431111
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcC
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 462 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 462 (793)
++.+.... ...-.|.--..+.+.+.- ....+++|||
T Consensus 142 ---------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~~~~-~~~~~~~iGD 177 (230)
T 3um9_A 142 ---------------------LISVDEVR----------------------LFKPHQKVYELAMDTLHL-GESEILFVSC 177 (230)
T ss_dssp ---------------------EEEGGGTT----------------------CCTTCHHHHHHHHHHHTC-CGGGEEEEES
T ss_pred ---------------------eEehhhcc----------------------cCCCChHHHHHHHHHhCC-CcccEEEEeC
Confidence 11111000 000011111223333322 3467999999
Q ss_pred CccChhhhhhcceeEEeccC---CcccccccCCeeecchhhHHHH
Q 003824 463 GANDVGMLQEADIGVGISGV---EGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 463 G~ND~~ml~~AdvGI~i~g~---~~~~a~~~aD~~i~~f~~l~~l 504 (793)
+.||+.|.+.|++++.+-.. .....+..+|+++.++..+..+
T Consensus 178 ~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (230)
T 3um9_A 178 NSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASR 222 (230)
T ss_dssp CHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHT
T ss_pred CHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHH
Confidence 99999999999999876222 2222456899999998887665
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.92 E-value=3.3e-05 Score=77.23 Aligned_cols=121 Identities=16% Similarity=0.155 Sum_probs=78.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.+.++.|++.|+++.++|+.....+..+....|+...-..+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i--------------------------------- 149 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSI--------------------------------- 149 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeE---------------------------------
Confidence 47899999999999999999999999988888888888764311111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCC-eEEEEcC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSS-TTLAIGD 462 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~-~vlaiGD 462 (793)
+.+... -...-.|+--..+.+.+.- ... .+++|||
T Consensus 150 ---------------------~~~~~~----------------------~~~Kp~~~~~~~~~~~lgi-~~~~~~v~vGD 185 (231)
T 3kzx_A 150 ---------------------IGSGDT----------------------GTIKPSPEPVLAALTNINI-EPSKEVFFIGD 185 (231)
T ss_dssp ---------------------EEETSS----------------------SCCTTSSHHHHHHHHHHTC-CCSTTEEEEES
T ss_pred ---------------------Eccccc----------------------CCCCCChHHHHHHHHHcCC-CcccCEEEEcC
Confidence 110000 0000111111233333322 334 7999999
Q ss_pred CccChhhhhhcce-eEEeccCCcccccccCCeeecchhhHHHHH
Q 003824 463 GANDVGMLQEADI-GVGISGVEGMQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 463 G~ND~~ml~~Adv-GI~i~g~~~~~a~~~aD~~i~~f~~l~~ll 505 (793)
+.||+.|.+.|++ +|.+.+... ..+|+++.++..+..+|
T Consensus 186 ~~~Di~~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 186 SISDIQSAIEAGCLPIKYGSTNI----IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp SHHHHHHHHHTTCEEEEECC---------CCEEESSHHHHHHHH
T ss_pred CHHHHHHHHHCCCeEEEECCCCC----CCCceeeCCHHHHHHHH
Confidence 9999999999997 556633322 46789999988887764
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.91 E-value=2.2e-05 Score=78.58 Aligned_cols=48 Identities=17% Similarity=0.166 Sum_probs=35.6
Q ss_pred CCCeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchhhHH
Q 003824 453 TSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLE 502 (793)
Q Consensus 453 ~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~l~ 502 (793)
....+++|||+.||+.|.+.|++++.+.+.... .+ .||+++.++..+.
T Consensus 162 ~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~-~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 162 SPADCAAIEDAEAGISAIKSAGMFAVGVGQGQP-ML-GADLVVRQTSDLT 209 (233)
T ss_dssp CGGGEEEEECSHHHHHHHHHTTCEEEECC---------CSEECSSGGGCC
T ss_pred CHHHEEEEeCCHHHHHHHHHcCCEEEEECCccc-cc-cCCEEeCChHhCC
Confidence 347899999999999999999999987654432 33 8999999877754
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.90 E-value=4.2e-05 Score=76.33 Aligned_cols=52 Identities=13% Similarity=0.150 Sum_probs=39.9
Q ss_pred CCeEEEEcCCc-cChhhhhhcceeEEec--cCCcccccccCCeeecchhhHHHHH
Q 003824 454 SSTTLAIGDGA-NDVGMLQEADIGVGIS--GVEGMQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 454 ~~~vlaiGDG~-ND~~ml~~AdvGI~i~--g~~~~~a~~~aD~~i~~f~~l~~ll 505 (793)
...+++|||+. ||+.|.+.|++++.+- +......+..+|+++.++..+..+|
T Consensus 175 ~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 229 (235)
T 2om6_A 175 PEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVI 229 (235)
T ss_dssp GGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHHH
T ss_pred ccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHHH
Confidence 36899999999 9999999999999772 2222224456899999888877663
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.89 E-value=3.9e-05 Score=76.41 Aligned_cols=116 Identities=18% Similarity=0.031 Sum_probs=77.9
Q ss_pred ccCCChHHHHHHHHHcC-CeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAG-IKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~ag-Ikv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
++.+++.+.++.|++.| +++.++|+.....+..+...+|+...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------- 150 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------- 150 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh----------------------------------
Confidence 57899999999999999 9999999888777777777766532110
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc---CCCeEEE
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLA 459 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vla 459 (793)
. +++...| |..+++.+.+. ....+++
T Consensus 151 ------------------------------------------------~-~~~~~kp--k~~~~~~~~~~lgi~~~~~i~ 179 (234)
T 3ddh_A 151 ------------------------------------------------H-IEVMSDK--TEKEYLRLLSILQIAPSELLM 179 (234)
T ss_dssp ------------------------------------------------E-EEEESCC--SHHHHHHHHHHHTCCGGGEEE
T ss_pred ------------------------------------------------e-eeecCCC--CHHHHHHHHHHhCCCcceEEE
Confidence 0 1122222 33333333332 3367999
Q ss_pred EcCCc-cChhhhhhcceeEEec------cCCcccccc-cCCeeecchhhHHHH
Q 003824 460 IGDGA-NDVGMLQEADIGVGIS------GVEGMQAVM-SSDIAIAQFRFLERL 504 (793)
Q Consensus 460 iGDG~-ND~~ml~~AdvGI~i~------g~~~~~a~~-~aD~~i~~f~~l~~l 504 (793)
|||+. ||+.|.+.|++++.+- |........ .+|+++.++..+..+
T Consensus 180 iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 180 VGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp EESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred ECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 99996 9999999999988653 111111233 449999998877665
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.83 E-value=1.9e-05 Score=78.11 Aligned_cols=46 Identities=7% Similarity=0.057 Sum_probs=37.8
Q ss_pred CCeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchhhH
Q 003824 454 SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFL 501 (793)
Q Consensus 454 ~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~l 501 (793)
...+++|||+.||+.|++.|++++.+.+... ..+ .||+++.++..+
T Consensus 162 ~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~-~a~~v~~~~~el 207 (221)
T 2wf7_A 162 PSESIGLEDSQAGIQAIKDSGALPIGVGRPE-DLG-DDIVIVPDTSHY 207 (221)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESCHH-HHC-SSSEEESSGGGC
T ss_pred hhHeEEEeCCHHHHHHHHHCCCEEEEECCHH-Hhc-cccchhcCHHhC
Confidence 4679999999999999999999998865433 245 899999887764
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=6.2e-05 Score=75.83 Aligned_cols=41 Identities=22% Similarity=0.143 Sum_probs=36.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 57899999999999999999999999988888888888864
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.82 E-value=1.8e-05 Score=81.24 Aligned_cols=40 Identities=33% Similarity=0.315 Sum_probs=34.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.+++.+.++.|++.|+++.++|++....+..+...+|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999988777777666654
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.81 E-value=3.1e-05 Score=78.21 Aligned_cols=137 Identities=13% Similarity=0.152 Sum_probs=86.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.|++.++++.|+++|+++.++|+.....+..+.. |+... ..++.-....
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~-------------------------- 127 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASF-------------------------- 127 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEEC--------------------------
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEE--------------------------
Confidence 689999999999999999999999999888877776 65332 2222111000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
.++.+..... +-....+.+.....|..+++.+.. ....+++|||+
T Consensus 128 ----------------------~~~~~~~~~~------------kp~p~~~~~~~~~~K~~~~~~~~~-~~~~~~~vGDs 172 (236)
T 2fea_A 128 ----------------------DNDYIHIDWP------------HSCKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGDS 172 (236)
T ss_dssp ----------------------SSSBCEEECT------------TCCCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEECC
T ss_pred ----------------------cCCceEEecC------------CCCccccccccCCcHHHHHHHHhc-cCCeEEEEeCC
Confidence 0000000000 000000111134578888887754 56789999999
Q ss_pred ccChhhhhhcceeEEeccCCcccccc--cCCeeecchhhHHHHH
Q 003824 464 ANDVGMLQEADIGVGISGVEGMQAVM--SSDIAIAQFRFLERLL 505 (793)
Q Consensus 464 ~ND~~ml~~AdvGI~i~g~~~~~a~~--~aD~~i~~f~~l~~ll 505 (793)
.+|+.|.+.|++.+...+.. ..... .+|+++.++..+..+|
T Consensus 173 ~~Di~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 173 VTDVEAAKLSDLCFARDYLL-NECREQNLNHLPYQDFYEIRKEI 215 (236)
T ss_dssp GGGHHHHHTCSEEEECHHHH-HHHHHTTCCEECCSSHHHHHHHH
T ss_pred hHHHHHHHhCCeeeechHHH-HHHHHCCCCeeecCCHHHHHHHH
Confidence 99999999999988643321 11222 2789998888877763
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=6.2e-05 Score=76.57 Aligned_cols=42 Identities=21% Similarity=0.375 Sum_probs=36.3
Q ss_pred hHHHHHHHHHhcCCCeEEEEcC----CccChhhhhhcc-eeEEeccCC
Q 003824 441 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVE 483 (793)
Q Consensus 441 qK~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~Ad-vGI~i~g~~ 483 (793)
.|+..++.+.+ ....|+|+|| |.||.+||+.|+ +|+++.+.+
T Consensus 187 ~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~ 233 (246)
T 3f9r_A 187 DKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYK 233 (246)
T ss_dssp SGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHH
T ss_pred CHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHH
Confidence 79999988887 7789999999 799999999995 899986543
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=1.4e-05 Score=82.29 Aligned_cols=56 Identities=14% Similarity=0.249 Sum_probs=43.3
Q ss_pred hHHHHHHHHHhcCCCeEEEEcC----CccChhhhhhcc-eeEEeccCCcccccccCCeeecc
Q 003824 441 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 441 qK~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~Ad-vGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
.|+..++.+.......|++||| |.||.+||+.|+ +|++|.+ .....+..||++...
T Consensus 197 sKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~N-A~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 197 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS-PQDTVQRCREIFFPE 257 (262)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS-HHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecC-CCHHHHHhhheeCCC
Confidence 5988888882113478999999 999999999999 6999944 344477888887654
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=3.4e-05 Score=80.02 Aligned_cols=125 Identities=15% Similarity=0.065 Sum_probs=81.8
Q ss_pred ccCCChHHHHHHHHHcCC--eEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGI--KLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVL 381 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agI--kv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (793)
++.+++.++++.|++.|+ +++++|+.....+..+...+|+...-..
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~-------------------------------- 189 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDG-------------------------------- 189 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSE--------------------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccce--------------------------------
Confidence 467899999999999999 9999999998888888888776432111
Q ss_pred HHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc---CC-CeE
Q 003824 382 HQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TS-STT 457 (793)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~-~~v 457 (793)
++.+.... . .. ..++-|..+++.+.+. .. +.+
T Consensus 190 ----------------------v~~~~~~~------------------~--~~--~~~Kp~~~~~~~~~~~lgi~~~~~~ 225 (282)
T 3nuq_A 190 ----------------------LTYCDYSR------------------T--DT--LVCKPHVKAFEKAMKESGLARYENA 225 (282)
T ss_dssp ----------------------EECCCCSS------------------C--SS--CCCTTSHHHHHHHHHHHTCCCGGGE
T ss_pred ----------------------EEEeccCC------------------C--cc--cCCCcCHHHHHHHHHHcCCCCcccE
Confidence 11110000 0 00 0112233333322222 34 689
Q ss_pred EEEcCCccChhhhhhcceeEEeccCCcc-----cccccCCeeecchhhHHHH
Q 003824 458 LAIGDGANDVGMLQEADIGVGISGVEGM-----QAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 458 laiGDG~ND~~ml~~AdvGI~i~g~~~~-----~a~~~aD~~i~~f~~l~~l 504 (793)
++|||+.||+.|.+.|++|+++....+. .....||+++.++..+..+
T Consensus 226 i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 226 YFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp EEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred EEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 9999999999999999998766433322 1234789999998877665
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.77 E-value=5.2e-05 Score=75.86 Aligned_cols=124 Identities=13% Similarity=0.102 Sum_probs=80.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 140 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDH---------------------------------- 140 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhhe----------------------------------
Confidence 5789999999999999999999999998888888877776432111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
++.+.... ...-.|.--..+.+.+.- ....+++|||+
T Consensus 141 --------------------~~~~~~~~----------------------~~Kp~~~~~~~~~~~~~~-~~~~~~~iGD~ 177 (232)
T 1zrn_A 141 --------------------LLSVDPVQ----------------------VYKPDNRVYELAEQALGL-DRSAILFVASN 177 (232)
T ss_dssp --------------------EEESGGGT----------------------CCTTSHHHHHHHHHHHTS-CGGGEEEEESC
T ss_pred --------------------EEEecccC----------------------CCCCCHHHHHHHHHHcCC-CcccEEEEeCC
Confidence 11111000 011112222223333322 34679999999
Q ss_pred ccChhhhhhcceeEEeccCC---cccccccCCeeecchhhHHHH
Q 003824 464 ANDVGMLQEADIGVGISGVE---GMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 464 ~ND~~ml~~AdvGI~i~g~~---~~~a~~~aD~~i~~f~~l~~l 504 (793)
.||+.|.+.|++++.+-... ....+..+|+++.++..+..+
T Consensus 178 ~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 221 (232)
T 1zrn_A 178 AWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 221 (232)
T ss_dssp HHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred HHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHH
Confidence 99999999999998652221 111345689999887776554
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.76 E-value=7.6e-05 Score=74.55 Aligned_cols=123 Identities=15% Similarity=0.150 Sum_probs=80.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.+.++.|++. +++.++|+.....+..+....|+...-..
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~---------------------------------- 144 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDS---------------------------------- 144 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcce----------------------------------
Confidence 4679999999999999 99999999998888888777776431111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
++.+... -...-.|.--..+.+.+.- ....+++|||+
T Consensus 145 --------------------~~~~~~~----------------------~~~kp~~~~~~~~~~~~~~-~~~~~~~vGD~ 181 (234)
T 3u26_A 145 --------------------ITTSEEA----------------------GFFKPHPRIFELALKKAGV-KGEEAVYVGDN 181 (234)
T ss_dssp --------------------EEEHHHH----------------------TBCTTSHHHHHHHHHHHTC-CGGGEEEEESC
T ss_pred --------------------eEecccc----------------------CCCCcCHHHHHHHHHHcCC-CchhEEEEcCC
Confidence 1111000 0001111111223333322 34689999999
Q ss_pred c-cChhhhhhcce---eEEeccCCcccccccCCeeecchhhHHHHH
Q 003824 464 A-NDVGMLQEADI---GVGISGVEGMQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 464 ~-ND~~ml~~Adv---GI~i~g~~~~~a~~~aD~~i~~f~~l~~ll 505 (793)
. ||+.|.+.|++ +|+..+. ....+..+|+++.++..+..+|
T Consensus 182 ~~~Di~~a~~aG~~~~~v~~~~~-~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 182 PVKDCGGSKNLGMTSILLDRKGE-KREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp TTTTHHHHHTTTCEEEEECSSST-TGGGGGGCSEEESSTHHHHHHH
T ss_pred cHHHHHHHHHcCCEEEEECCCCC-ccccccCCCEeeCCHHHHHHHH
Confidence 7 99999999995 4444332 2234568999999988887764
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.76 E-value=4.7e-05 Score=76.11 Aligned_cols=41 Identities=24% Similarity=0.207 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHHc-CCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~a-gIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+++.+.++.|++. |+++.++|+.....+..+....|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 4679999999999999 9999999999988887777777763
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00023 Score=71.12 Aligned_cols=121 Identities=19% Similarity=0.143 Sum_probs=80.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.++++.|++. +++.++|+.....+..+...+|+...-..
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 147 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKD---------------------------------- 147 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhhe----------------------------------
Confidence 5789999999999999 99999999988888777777776432111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC----CeEEE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS----STTLA 459 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~----~~vla 459 (793)
++.+.... ..+-|..+++.+.+..| ..+++
T Consensus 148 --------------------~~~~~~~~--------------------------~~kp~~~~~~~~~~~~g~~~~~~~i~ 181 (238)
T 3ed5_A 148 --------------------IFVSEDTG--------------------------FQKPMKEYFNYVFERIPQFSAEHTLI 181 (238)
T ss_dssp --------------------EEEGGGTT--------------------------SCTTCHHHHHHHHHTSTTCCGGGEEE
T ss_pred --------------------EEEecccC--------------------------CCCCChHHHHHHHHHcCCCChhHeEE
Confidence 11111000 01111222322222233 67999
Q ss_pred EcCCc-cChhhhhhcceeE-Eecc-CCcccccccCCeeecchhhHHHHH
Q 003824 460 IGDGA-NDVGMLQEADIGV-GISG-VEGMQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 460 iGDG~-ND~~ml~~AdvGI-~i~g-~~~~~a~~~aD~~i~~f~~l~~ll 505 (793)
|||+. ||+.|.+.|+++. .+.. ......+..+|+++.++..+..+|
T Consensus 182 vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 182 IGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp EESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred ECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 99998 9999999999954 4432 222235668999999999988874
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00014 Score=72.79 Aligned_cols=124 Identities=19% Similarity=0.173 Sum_probs=81.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.++++.|+ .|++++++|+.....+..+...+|+...-..
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~---------------------------------- 151 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKK---------------------------------- 151 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSE----------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhcee----------------------------------
Confidence 57899999999999 9999999999988877777777776432111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc---CCCeEEEE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAI 460 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlai 460 (793)
++.+.... ..+-|..+++.+.+. ....+++|
T Consensus 152 --------------------~~~~~~~~--------------------------~~kp~~~~~~~~~~~lgi~~~~~~~i 185 (240)
T 3qnm_A 152 --------------------IILSEDLG--------------------------VLKPRPEIFHFALSATQSELRESLMI 185 (240)
T ss_dssp --------------------EEEGGGTT--------------------------CCTTSHHHHHHHHHHTTCCGGGEEEE
T ss_pred --------------------EEEeccCC--------------------------CCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 11111000 011122222222222 33689999
Q ss_pred cCCc-cChhhhhhcceeEEeccCCcc-cccccCCeeecchhhHHHHHHHhhh
Q 003824 461 GDGA-NDVGMLQEADIGVGISGVEGM-QAVMSSDIAIAQFRFLERLLLVHGH 510 (793)
Q Consensus 461 GDG~-ND~~ml~~AdvGI~i~g~~~~-~a~~~aD~~i~~f~~l~~lll~~GR 510 (793)
||+. ||+.|.+.|++++.+.+.... .....+|+++.++..+..+ .+|+
T Consensus 186 GD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~--~~~~ 235 (240)
T 3qnm_A 186 GDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL--LEGH 235 (240)
T ss_dssp ESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH--TC--
T ss_pred CCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH--Hhcc
Confidence 9995 999999999999977444331 3567899999998887775 3454
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.70 E-value=5e-05 Score=78.06 Aligned_cols=41 Identities=29% Similarity=0.165 Sum_probs=35.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 57899999999999999999999999888877777776654
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.68 E-value=5.7e-05 Score=72.51 Aligned_cols=54 Identities=15% Similarity=0.128 Sum_probs=38.5
Q ss_pred CCCeEEEEcCCccChhhhhhccee-EEec-cCCcccc----cccCCeeecchhhHHHHHH
Q 003824 453 TSSTTLAIGDGANDVGMLQEADIG-VGIS-GVEGMQA----VMSSDIAIAQFRFLERLLL 506 (793)
Q Consensus 453 ~~~~vlaiGDG~ND~~ml~~AdvG-I~i~-g~~~~~a----~~~aD~~i~~f~~l~~lll 506 (793)
....+++|||+.||+.|.+.|++. |++. |...... ...+|+++.++..+..+|+
T Consensus 117 ~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 117 DLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp CCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred CHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 446799999999999999999963 3442 2211111 2468999999988888754
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.68 E-value=2.7e-05 Score=76.68 Aligned_cols=40 Identities=13% Similarity=0.238 Sum_probs=35.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+.
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~ 122 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFM 122 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGG
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChH
Confidence 4789999999999999 999999999888888888777763
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.67 E-value=7.4e-05 Score=75.34 Aligned_cols=53 Identities=9% Similarity=-0.001 Sum_probs=38.6
Q ss_pred CCCeEEEEcCCccChhhhhhcceeE-EeccCCcc-c--ccccCCeeecchhhHHHHH
Q 003824 453 TSSTTLAIGDGANDVGMLQEADIGV-GISGVEGM-Q--AVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 453 ~~~~vlaiGDG~ND~~ml~~AdvGI-~i~g~~~~-~--a~~~aD~~i~~f~~l~~ll 505 (793)
....+++|||+.||+.|.+.|+++. ++...... . ....+|+++.++..+..+|
T Consensus 181 ~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 181 KPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNW 237 (247)
T ss_dssp CGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHH
T ss_pred ChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 3467999999999999999999764 55332221 1 1237999999988877663
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00025 Score=71.39 Aligned_cols=41 Identities=15% Similarity=0.124 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 47799999999999999999999998888777777777763
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.63 E-value=7.5e-05 Score=75.36 Aligned_cols=51 Identities=12% Similarity=0.027 Sum_probs=37.7
Q ss_pred CCeEEEEcCCccChhhhhhcceeE-EeccCCccc---ccccCCeeecchhhHHHH
Q 003824 454 SSTTLAIGDGANDVGMLQEADIGV-GISGVEGMQ---AVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 454 ~~~vlaiGDG~ND~~ml~~AdvGI-~i~g~~~~~---a~~~aD~~i~~f~~l~~l 504 (793)
...+++|||+.||+.|.+.|+++. ++....... ....+|+++.++..|..+
T Consensus 183 ~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~ 237 (243)
T 3qxg_A 183 ADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDS 237 (243)
T ss_dssp GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHH
T ss_pred HHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 367999999999999999999954 553322210 113699999998887766
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.61 E-value=9.5e-05 Score=72.98 Aligned_cols=118 Identities=15% Similarity=0.129 Sum_probs=77.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.||+.+.++.|++ |+++.++|+.....+..+.+.+|+...-.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~----------------------------------- 127 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------------- 127 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee-----------------------------------
Confidence 477999999999999 99999999988877777777777643211
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC---CeEEEE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS---STTLAI 460 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~---~~vlai 460 (793)
.++++...++-|..+.+.+.++.| ..+++|
T Consensus 128 -----------------------------------------------~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~v 160 (210)
T 2ah5_A 128 -----------------------------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAIII 160 (210)
T ss_dssp -----------------------------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred -----------------------------------------------eeecCCCCCCCChHHHHHHHHHcCCCcccEEEE
Confidence 112222112233344443333333 679999
Q ss_pred cCCccChhhhhhcceeE-Eec-cCC-ccccc-ccCCeeecchhhHHHH
Q 003824 461 GDGANDVGMLQEADIGV-GIS-GVE-GMQAV-MSSDIAIAQFRFLERL 504 (793)
Q Consensus 461 GDG~ND~~ml~~AdvGI-~i~-g~~-~~~a~-~~aD~~i~~f~~l~~l 504 (793)
||+.||+.|-++|++.. ++. |.. ....+ ..+|+++.++..+..+
T Consensus 161 gDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 161 GDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred CCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 99999999999999832 332 221 11122 3589999887776554
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.61 E-value=3.5e-05 Score=78.27 Aligned_cols=49 Identities=12% Similarity=0.144 Sum_probs=38.0
Q ss_pred CeEEEEcCCccChhhhhhcceeE---EeccCCcccccccCCeeecchhhHHHH
Q 003824 455 STTLAIGDGANDVGMLQEADIGV---GISGVEGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 455 ~~vlaiGDG~ND~~ml~~AdvGI---~i~g~~~~~a~~~aD~~i~~f~~l~~l 504 (793)
..+++|||+.||+.|.+.|++.. +..+. ....+..||+++.++..+...
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~-~~~~~~~ad~v~~sl~el~~~ 242 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNL-SRDLTTKATLVLNSLQDFQPE 242 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTS-CGGGSTTSSEECSCGGGCCGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCC-chhhcccccEeecCHHHhhHH
Confidence 78999999999999999999554 33322 233678899999998876554
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.59 E-value=4.6e-05 Score=77.77 Aligned_cols=41 Identities=15% Similarity=0.074 Sum_probs=36.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
-++.+++.++++.|++.|++++++|+.....+..+....|+
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 149 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGL 149 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcCh
Confidence 35679999999999999999999999998888888777776
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.57 E-value=6.1e-05 Score=76.56 Aligned_cols=53 Identities=21% Similarity=0.307 Sum_probs=39.6
Q ss_pred hHHHHHHHHHhcCCCeEEEEcC----CccChhhhhhcce-eEEeccCCcccccccCCee
Q 003824 441 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEADI-GVGISGVEGMQAVMSSDIA 494 (793)
Q Consensus 441 qK~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~Adv-GI~i~g~~~~~a~~~aD~~ 494 (793)
.|+..++.+.......|++||| |.||.+||+.|+. |++|.+... ..|..||++
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~-~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED-TRRICELLF 245 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH-HHHHHHHHC
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCH-HHHHHHhhc
Confidence 6888888772114478999999 9999999999987 999965443 378888876
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00029 Score=71.65 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=34.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+++.++++.|+ |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999988888888887764
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00032 Score=69.99 Aligned_cols=52 Identities=8% Similarity=-0.049 Sum_probs=40.8
Q ss_pred CCeEEEEcCCc-cChhhhhhcceeEEeccCC----------cccccccCCeeecchhhHHHHH
Q 003824 454 SSTTLAIGDGA-NDVGMLQEADIGVGISGVE----------GMQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 454 ~~~vlaiGDG~-ND~~ml~~AdvGI~i~g~~----------~~~a~~~aD~~i~~f~~l~~ll 505 (793)
...+++|||+. ||+.|.+.|++++.+.+.. ....+..+|+++.++..+..+|
T Consensus 172 ~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 172 KKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp GGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred chhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 46799999996 9999999999999773322 1224578999999988877764
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00029 Score=71.03 Aligned_cols=121 Identities=8% Similarity=-0.003 Sum_probs=81.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.++++.|++. +++.++|+.....+..+...+|+. - +.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~-f-------~~---------------------------- 158 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP-W-------DV---------------------------- 158 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC-C-------SC----------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC-e-------eE----------------------------
Confidence 5679999999999997 999999999888888877777762 0 00
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcC---CCeEEEE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKT---SSTTLAI 460 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~---~~~vlai 460 (793)
++.+.. +....| |..+++.+.+.. ...+++|
T Consensus 159 --------------------~~~~~~------------------------~~~~kp--~~~~~~~~~~~lgi~~~~~~~i 192 (254)
T 3umg_A 159 --------------------IIGSDI------------------------NRKYKP--DPQAYLRTAQVLGLHPGEVMLA 192 (254)
T ss_dssp --------------------CCCHHH------------------------HTCCTT--SHHHHHHHHHHTTCCGGGEEEE
T ss_pred --------------------EEEcCc------------------------CCCCCC--CHHHHHHHHHHcCCChHHEEEE
Confidence 000000 000111 122233222223 3679999
Q ss_pred cCCccChhhhhhcceeEEeccCCc---c------cccccCCeeecchhhHHHHHHH
Q 003824 461 GDGANDVGMLQEADIGVGISGVEG---M------QAVMSSDIAIAQFRFLERLLLV 507 (793)
Q Consensus 461 GDG~ND~~ml~~AdvGI~i~g~~~---~------~a~~~aD~~i~~f~~l~~lll~ 507 (793)
||+.||+.|.+.|++++.+.+... . ..+..+|+++.++..+..+|..
T Consensus 193 GD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 193 AAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp ESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred eCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence 999999999999999997754211 0 0256789999999998887543
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00037 Score=67.96 Aligned_cols=120 Identities=14% Similarity=0.104 Sum_probs=77.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.+ ++.|++. +++.++|+.....+..+...+|+...-..
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 117 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKG---------------------------------- 117 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcE----------------------------------
Confidence 57799999 9999999 99999999998888888888876432111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
++.+.... ...-.|+--..+.+.+. ...+++|||+
T Consensus 118 --------------------~~~~~~~~----------------------~~Kp~~~~~~~~~~~~~---~~~~~~vGD~ 152 (201)
T 2w43_A 118 --------------------IFSAESVK----------------------EYKPSPKVYKYFLDSIG---AKEAFLVSSN 152 (201)
T ss_dssp --------------------EEEGGGGT----------------------CCTTCHHHHHHHHHHHT---CSCCEEEESC
T ss_pred --------------------EEehhhcC----------------------CCCCCHHHHHHHHHhcC---CCcEEEEeCC
Confidence 11111000 00011111122333332 4678999999
Q ss_pred ccChhhhhhcceeEEeccC---CcccccccCCeeecchhhHHHH
Q 003824 464 ANDVGMLQEADIGVGISGV---EGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 464 ~ND~~ml~~AdvGI~i~g~---~~~~a~~~aD~~i~~f~~l~~l 504 (793)
.||+.|.+.|++++.+-.. ........+|+++.++..+..+
T Consensus 153 ~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 196 (201)
T 2w43_A 153 AFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEW 196 (201)
T ss_dssp HHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHH
T ss_pred HHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHH
Confidence 9999999999998754221 1111234689999988877665
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0003 Score=72.04 Aligned_cols=123 Identities=11% Similarity=0.064 Sum_probs=80.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.++++.|++.|+++.++|+... .+..+...+|+...-..
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~---------------------------------- 150 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDF---------------------------------- 150 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSC----------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhE----------------------------------
Confidence 4779999999999999999999999665 35666777776321100
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
++.+... -...-.|.--..+.+.+.- ....+++|||+
T Consensus 151 --------------------~~~~~~~----------------------~~~Kp~~~~~~~~~~~~g~-~~~~~~~vGD~ 187 (263)
T 3k1z_A 151 --------------------VLTSEAA----------------------GWPKPDPRIFQEALRLAHM-EPVVAAHVGDN 187 (263)
T ss_dssp --------------------EEEHHHH----------------------SSCTTSHHHHHHHHHHHTC-CGGGEEEEESC
T ss_pred --------------------EEeeccc----------------------CCCCCCHHHHHHHHHHcCC-CHHHEEEECCC
Confidence 1111000 0011122222233343322 44779999999
Q ss_pred c-cChhhhhhcceeEEeccCCccccc------ccCCeeecchhhHHHHH
Q 003824 464 A-NDVGMLQEADIGVGISGVEGMQAV------MSSDIAIAQFRFLERLL 505 (793)
Q Consensus 464 ~-ND~~ml~~AdvGI~i~g~~~~~a~------~~aD~~i~~f~~l~~ll 505 (793)
. ||+.|.+.|++++.+.+.... .. ..+|+++.++..+..+|
T Consensus 188 ~~~Di~~a~~aG~~~i~~~~~~~-~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 188 YLCDYQGPRAVGMHSFLVVGPQA-LDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp HHHHTHHHHTTTCEEEEECCSSC-CCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred cHHHHHHHHHCCCEEEEEcCCCC-CchhhcccCCCceEeCCHHHHHHHH
Confidence 7 999999999999876443321 22 26899999998888775
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00023 Score=71.83 Aligned_cols=40 Identities=20% Similarity=0.156 Sum_probs=34.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.+++.++++.|++.|+++.++|+.....+..+...+|+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 149 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP 149 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 3679999999999999999999999888777777777765
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0016 Score=65.85 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=32.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
++.+++.+.++.|+ .|+++.++|+.....+.......|+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l 150 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGL 150 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCc
Confidence 56899999999999 9999999999887777666666665
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00026 Score=71.60 Aligned_cols=52 Identities=13% Similarity=0.117 Sum_probs=40.9
Q ss_pred CCeEEEEcCCccChhhhhhcceeEEeccCC---cc----c--ccccCCeeecchhhHHHHH
Q 003824 454 SSTTLAIGDGANDVGMLQEADIGVGISGVE---GM----Q--AVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 454 ~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~---~~----~--a~~~aD~~i~~f~~l~~ll 505 (793)
...+++|||+.||+.|.+.|++++.+.+.. +. . .+..+|+++.++..|..+|
T Consensus 190 ~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 190 PQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp GGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred hHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 467999999999999999999999775411 11 1 2567999999998887774
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00048 Score=68.13 Aligned_cols=53 Identities=19% Similarity=0.260 Sum_probs=37.7
Q ss_pred CCCeEEEEcCCccChhhhhhccee--EEec-cCCccc-ccccCCeeecchhhHHHHH
Q 003824 453 TSSTTLAIGDGANDVGMLQEADIG--VGIS-GVEGMQ-AVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 453 ~~~~vlaiGDG~ND~~ml~~AdvG--I~i~-g~~~~~-a~~~aD~~i~~f~~l~~ll 505 (793)
....+++|||+.||+.|-+.|++. |++. |..... ....+|+++.++..+..++
T Consensus 147 ~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l 203 (211)
T 2gmw_A 147 DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 203 (211)
T ss_dssp CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred CHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHH
Confidence 346789999999999999999974 4553 221111 1235899999988887763
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00085 Score=69.73 Aligned_cols=59 Identities=22% Similarity=0.228 Sum_probs=45.9
Q ss_pred hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchhh
Q 003824 441 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRF 500 (793)
Q Consensus 441 qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~ 500 (793)
.|...++.+.+..| ..++++||+.||++|++.|++||++.+.. ...+..||+++.+...
T Consensus 211 ~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~-~~~~~~a~~v~~~~~~ 272 (289)
T 3gyg_A 211 GKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNAT-QEAKNLHNLITDSEYS 272 (289)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCC-HHHHHHCCCBCSSCHH
T ss_pred CHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCcc-HHHHHhCCEEcCCCCc
Confidence 57777776665433 57999999999999999999999996543 3367889998876443
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00026 Score=70.35 Aligned_cols=52 Identities=12% Similarity=0.293 Sum_probs=39.5
Q ss_pred CCeEEEEcCCccChhhhhhccee-EEeccCCcc------ccccc-CCeeecchhhHHHHH
Q 003824 454 SSTTLAIGDGANDVGMLQEADIG-VGISGVEGM------QAVMS-SDIAIAQFRFLERLL 505 (793)
Q Consensus 454 ~~~vlaiGDG~ND~~ml~~AdvG-I~i~g~~~~------~a~~~-aD~~i~~f~~l~~ll 505 (793)
...+++|||+.||+.|.+.|+++ |++.+.... ..+.. ||+++.++..+..+|
T Consensus 160 ~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 219 (229)
T 2fdr_A 160 PDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 219 (229)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred hhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHH
Confidence 46799999999999999999998 666443321 13444 999999988876653
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00034 Score=67.66 Aligned_cols=42 Identities=21% Similarity=0.229 Sum_probs=37.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCc-hhhHHHHHHHcCcc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDK-METAINIGFACSLL 344 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~-~~ta~~ia~~~gi~ 344 (793)
-++.|++.++|+.|++.|++++++||.. ...+..+.+.+|+.
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 3678999999999999999999999998 68888888888863
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0028 Score=61.21 Aligned_cols=41 Identities=20% Similarity=0.288 Sum_probs=36.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCch---hhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKM---ETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~---~ta~~ia~~~gi~ 344 (793)
++.+|+.++++.|+++|+++.++|+... ..+..+...+|+.
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 5889999999999999999999998776 7777888888874
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00042 Score=71.52 Aligned_cols=40 Identities=15% Similarity=-0.070 Sum_probs=34.4
Q ss_pred ccCCChHHHHHHHHHc-CCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQA-GIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~a-gIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
.+.+++.+.++.|++. |+++.++|+.....+..+....|+
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l 154 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKI 154 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 3579999999999999 999999999988877777776665
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.02 Score=57.93 Aligned_cols=40 Identities=13% Similarity=0.091 Sum_probs=34.9
Q ss_pred cCCChHHHHHHHHHcCCeEEEEe---CCchhhHHHHHHHcCcc
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLL 344 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlT---GD~~~ta~~ia~~~gi~ 344 (793)
+-+++.++++.+++.|++++++| |+...........+|+-
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 66788999999999999999999 99888888888777763
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00062 Score=65.40 Aligned_cols=38 Identities=16% Similarity=0.314 Sum_probs=31.1
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
+.+++.+.++.|++.|++++++|+... .+..+....|+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~ 120 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSI 120 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCC
Confidence 679999999999999999999998764 45555556655
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0047 Score=63.04 Aligned_cols=42 Identities=10% Similarity=0.098 Sum_probs=33.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeC---CchhhHHHHHHHcCcc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTG---DKMETAINIGFACSLL 344 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTG---D~~~ta~~ia~~~gi~ 344 (793)
+.+-+++.++|++|+++|++++++|| +..........++|+.
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~ 65 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIP 65 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 33446799999999999999999999 5666666777778874
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0028 Score=62.73 Aligned_cols=53 Identities=21% Similarity=0.231 Sum_probs=40.1
Q ss_pred CCCeEEEEcCCc-cChhhhhhcceeEEecc--CCcccccccCCeeecchhhHHHHH
Q 003824 453 TSSTTLAIGDGA-NDVGMLQEADIGVGISG--VEGMQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 453 ~~~~vlaiGDG~-ND~~ml~~AdvGI~i~g--~~~~~a~~~aD~~i~~f~~l~~ll 505 (793)
....+++|||+. ||+.|.+.|++++.+-. .........+|+++.++..+..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 171 DASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred CchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 346799999998 99999999999875522 221112567899999999888774
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.00075 Score=66.98 Aligned_cols=52 Identities=12% Similarity=0.041 Sum_probs=35.6
Q ss_pred CCeEEEEcCCccChhhhhhcceeE--Eec-cCCc-ccccccCCeeecchhhHHHHH
Q 003824 454 SSTTLAIGDGANDVGMLQEADIGV--GIS-GVEG-MQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 454 ~~~vlaiGDG~ND~~ml~~AdvGI--~i~-g~~~-~~a~~~aD~~i~~f~~l~~ll 505 (793)
...+++|||+.||+.|.+.|++.. .+. |... ......+|+++.++..+..++
T Consensus 154 ~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l 209 (218)
T 2o2x_A 154 LQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAI 209 (218)
T ss_dssp GGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHH
T ss_pred HHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHH
Confidence 367999999999999999999864 332 2111 112345788888777776663
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0062 Score=58.46 Aligned_cols=39 Identities=15% Similarity=0.275 Sum_probs=24.5
Q ss_pred EEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhccceEEEEE
Q 003824 209 LLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILA 251 (793)
Q Consensus 209 l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a 251 (793)
.+.-|....|.+. +-...+.....+.++..+|..++.+|
T Consensus 133 ~v~iGn~~~m~~~----gi~i~~~~~~~~~~~~~~G~T~V~va 171 (185)
T 2kmv_A 133 KVLIGNREWMIRN----GLVINNDVNDFMTEHERKGRTAVLVA 171 (185)
T ss_dssp EEEEECHHHHHHH----TCCCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEECCHHHHHHc----CCCCCHHHHHHHHHHHhCCCeEEEEE
Confidence 4555887766432 11122344556777888999988888
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0054 Score=62.57 Aligned_cols=124 Identities=18% Similarity=0.157 Sum_probs=79.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.|++.++++.|++ ++++.++|+.....+..+...+|+...-..
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~---------------------------------- 165 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDA---------------------------------- 165 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSE----------------------------------
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhhe----------------------------------
Confidence 577999999999998 599999999998888888777776432111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
++.+.... ...-.|+--..+.+.+.- ....+++|||+
T Consensus 166 --------------------i~~~~~~~----------------------~~KP~p~~~~~~~~~~~~-~~~~~~~vGDs 202 (260)
T 2gfh_A 166 --------------------IVIGGEQK----------------------EEKPAPSIFYHCCDLLGV-QPGDCVMVGDT 202 (260)
T ss_dssp --------------------EEEGGGSS----------------------SCTTCHHHHHHHHHHHTC-CGGGEEEEESC
T ss_pred --------------------EEecCCCC----------------------CCCCCHHHHHHHHHHcCC-ChhhEEEECCC
Confidence 11111000 001112211223333322 34679999995
Q ss_pred -ccChhhhhhcce--eEEeccCCc--ccccccCCeeecchhhHHHHH
Q 003824 464 -ANDVGMLQEADI--GVGISGVEG--MQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 464 -~ND~~ml~~Adv--GI~i~g~~~--~~a~~~aD~~i~~f~~l~~ll 505 (793)
.||+.+-+.|++ .|.+.+... ......+|+++.++..+..++
T Consensus 203 ~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~l 249 (260)
T 2gfh_A 203 LETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALL 249 (260)
T ss_dssp TTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHH
T ss_pred chhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHHH
Confidence 999999999999 577744321 112356899999988876663
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0012 Score=63.93 Aligned_cols=40 Identities=13% Similarity=0.008 Sum_probs=34.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+++.+.++.|++.| +++++|+.....+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 36799999999999999 99999999888887777777763
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0064 Score=62.08 Aligned_cols=43 Identities=14% Similarity=0.031 Sum_probs=34.8
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeC---CchhhHHHHHHHcCcc
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTG---DKMETAINIGFACSLL 344 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTG---D~~~ta~~ia~~~gi~ 344 (793)
.+.+-+++.++|++|+++|++++++|| +...........+|+.
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 445567899999999999999999999 5666666666777874
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0012 Score=64.59 Aligned_cols=36 Identities=14% Similarity=0.096 Sum_probs=30.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA 340 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~ 340 (793)
++.+++.++++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 467899999999999 999999999877766665554
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.00081 Score=60.80 Aligned_cols=41 Identities=12% Similarity=0.004 Sum_probs=34.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
.++.|++.++++.|++.|+++.++|+.....+..+.+.+|+
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 34678899999999999999999999988877777666665
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.026 Score=57.47 Aligned_cols=42 Identities=14% Similarity=0.103 Sum_probs=36.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEe---CCchhhHHHHHHHcCcc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLL 344 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlT---GD~~~ta~~ia~~~gi~ 344 (793)
.++-+++.++|+.|++.|++++++| |+.........+.+|+-
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5677899999999999999999999 88888888888888874
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0082 Score=58.85 Aligned_cols=42 Identities=24% Similarity=0.192 Sum_probs=37.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 345 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~ 345 (793)
++.|++.++++.|++.|+++.++|+-....+..+.+.+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 467999999999999999999999999999998888888753
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.33 E-value=0.015 Score=58.02 Aligned_cols=60 Identities=18% Similarity=0.182 Sum_probs=39.9
Q ss_pred HHHHHHHHHhcC---CCeEEEEcCC-ccChhhhhhcceeEEe--ccCCc-cccc---ccCCeeecchhhH
Q 003824 442 KALVTRLVKTKT---SSTTLAIGDG-ANDVGMLQEADIGVGI--SGVEG-MQAV---MSSDIAIAQFRFL 501 (793)
Q Consensus 442 K~~iv~~lk~~~---~~~vlaiGDG-~ND~~ml~~AdvGI~i--~g~~~-~~a~---~~aD~~i~~f~~l 501 (793)
|...++.+.+.. ...|++|||+ .||+.|++.|++++.. .|... ...+ ..+|+++.++..+
T Consensus 178 k~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el 247 (250)
T 2c4n_A 178 SPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp STHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred CHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHh
Confidence 444555444433 3689999999 7999999999999643 23222 1122 4689998876654
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.23 E-value=0.02 Score=58.30 Aligned_cols=41 Identities=15% Similarity=0.207 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEe---CCchhhHHHHHHHcCccc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLLR 345 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlT---GD~~~ta~~ia~~~gi~~ 345 (793)
.+ +++.++|++++++|++++++| |+..........++|+..
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 35 899999999999999999999 788888888888888843
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.012 Score=57.10 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=29.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINI 337 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~i 337 (793)
++.+|+.++++.|+++|+++.++||.....+..+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~ 69 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPL 69 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh
Confidence 5789999999999999999999999877666433
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.11 E-value=0.0011 Score=64.53 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=26.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhh
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMET 333 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~t 333 (793)
++.+++.++++.|++.|++++++|+.....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~ 120 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 120 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHH
Confidence 567999999999999999999999976544
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.015 Score=58.74 Aligned_cols=42 Identities=7% Similarity=0.112 Sum_probs=34.5
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchh----hHHHHHHHcCc
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKME----TAINIGFACSL 343 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~----ta~~ia~~~gi 343 (793)
+.++.|++.+.++.|++.|+++.++||++.. .+..-.+..||
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi 144 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGF 144 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCc
Confidence 4678999999999999999999999999764 44555556666
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.018 Score=58.12 Aligned_cols=46 Identities=15% Similarity=0.388 Sum_probs=36.4
Q ss_pred CCCeEEEEcCCccChhhhhhcce-eEEeccCCcccccccCCeeecchhhH
Q 003824 453 TSSTTLAIGDGANDVGMLQEADI-GVGISGVEGMQAVMSSDIAIAQFRFL 501 (793)
Q Consensus 453 ~~~~vlaiGDG~ND~~ml~~Adv-GI~i~g~~~~~a~~~aD~~i~~f~~l 501 (793)
....+++|||+.+|+.+=++|++ .|++.+.+. ...||+++.++..|
T Consensus 186 ~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~---~~~ad~vi~~l~eL 232 (250)
T 4gib_A 186 NPQNCIGIEDASAGIDAINSANMFSVGVGNYEN---LKKANLVVDSTNQL 232 (250)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEESCTTT---TTTSSEEESSGGGC
T ss_pred ChHHeEEECCCHHHHHHHHHcCCEEEEECChhH---hccCCEEECChHhC
Confidence 34679999999999999999998 557754443 34689999988775
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.023 Score=55.92 Aligned_cols=40 Identities=18% Similarity=0.141 Sum_probs=33.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.|++.++++.|+++|+++.++|+.... +..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcH
Confidence 57899999999999999999999998663 66666677763
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=95.58 E-value=0.02 Score=61.65 Aligned_cols=42 Identities=21% Similarity=0.194 Sum_probs=37.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 345 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~ 345 (793)
++.||+.++++.|+++|+++.++|+.....+..+....|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 577899999999999999999999999988888888888753
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=95.37 E-value=0.26 Score=49.36 Aligned_cols=64 Identities=13% Similarity=0.075 Sum_probs=41.8
Q ss_pred HHHHHHHHHhcCC---CeEEEEcCCc-cChhhhhhcceeE-Eec-cCC-cccc---cccCCeeecchhhHHHHH
Q 003824 442 KALVTRLVKTKTS---STTLAIGDGA-NDVGMLQEADIGV-GIS-GVE-GMQA---VMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 442 K~~iv~~lk~~~~---~~vlaiGDG~-ND~~ml~~AdvGI-~i~-g~~-~~~a---~~~aD~~i~~f~~l~~ll 505 (793)
|..+.+.+.+..| ..+++|||+. ||+.|.+.|++.. .+. |.. ..+. ...+|+++.++..+..++
T Consensus 181 ~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l 254 (259)
T 2ho4_A 181 EKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHI 254 (259)
T ss_dssp SHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHH
Confidence 3444444444333 6799999998 9999999999754 442 211 1111 245899998888776663
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=95.30 E-value=0.01 Score=58.76 Aligned_cols=34 Identities=9% Similarity=0.015 Sum_probs=29.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIG 338 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia 338 (793)
++.|++.++++.|++. +++.++|+.....+..+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHH
Confidence 3668999999999999 999999999887776655
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=95.09 E-value=0.022 Score=57.63 Aligned_cols=42 Identities=14% Similarity=0.088 Sum_probs=34.0
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchh----hHHHHHHHcCc
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKME----TAINIGFACSL 343 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~----ta~~ia~~~gi 343 (793)
++++.|++.+.++.|++.|+++.++||++.. .+..-.+..||
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi 144 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGF 144 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCc
Confidence 4678899999999999999999999999764 44444555666
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=95.05 E-value=0.039 Score=58.05 Aligned_cols=42 Identities=19% Similarity=0.283 Sum_probs=37.6
Q ss_pred eeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHc
Q 003824 300 AVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 341 (793)
Q Consensus 300 ~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~ 341 (793)
.+...+.++..+.++.|+++|++|||+||=....+..+|...
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 139 VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp ECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 334467889999999999999999999999999999999875
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=94.99 E-value=0.02 Score=59.59 Aligned_cols=32 Identities=25% Similarity=0.264 Sum_probs=28.4
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhh
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMET 333 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~t 333 (793)
++++.+|+.++++.|+++|+++.++||.....
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 46678999999999999999999999998543
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=94.85 E-value=0.012 Score=56.08 Aligned_cols=40 Identities=25% Similarity=0.277 Sum_probs=32.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCC---------------chhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGD---------------KMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD---------------~~~ta~~ia~~~gi 343 (793)
++.|++.++|+.|+++|++++++|+- ....+..+....|+
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 96 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGV 96 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCC
Confidence 57899999999999999999999997 34555566666665
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=94.74 E-value=0.16 Score=52.71 Aligned_cols=43 Identities=16% Similarity=0.145 Sum_probs=34.3
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEe---CCchhhHHHHHHHcCcc
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLT---GDKMETAINIGFACSLL 344 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlT---GD~~~ta~~ia~~~gi~ 344 (793)
.+++-+++.++++.|++.|++++++| |+.........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45677899999999999999999999 46666665666667763
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.66 E-value=0.038 Score=56.10 Aligned_cols=42 Identities=7% Similarity=0.056 Sum_probs=32.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHH---HHHHHcCcc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAI---NIGFACSLL 344 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~---~ia~~~gi~ 344 (793)
.++-|++.++|+.|++.|+++.++||....... ..-..+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 467899999999999999999999999854433 333455653
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=94.61 E-value=0.086 Score=52.16 Aligned_cols=40 Identities=13% Similarity=0.139 Sum_probs=35.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
-++.|++.++++.|++.| ++.++|+.....+..+...+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 368999999999999999 9999999988888887777775
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.01 E-value=0.15 Score=51.79 Aligned_cols=37 Identities=16% Similarity=0.243 Sum_probs=32.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGF 339 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~ 339 (793)
-++.|++.++++.|+++|+++.++|+-+...+..+-.
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~ 165 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFG 165 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHH
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHH
Confidence 3688999999999999999999999988876666554
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=93.32 E-value=0.53 Score=43.95 Aligned_cols=17 Identities=24% Similarity=0.194 Sum_probs=14.6
Q ss_pred ecCCccHHHHHHHHHHc
Q 003824 136 EAESPDEAAFVIAAREL 152 (793)
Q Consensus 136 ~~~sp~E~Alv~~a~~~ 152 (793)
.++||...|++++|++.
T Consensus 35 ~SeHPlA~AIv~~a~~~ 51 (165)
T 2arf_A 35 SSEHPLGVAVTKYCKEE 51 (165)
T ss_dssp TSCSTTHHHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHh
Confidence 36799999999999765
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=90.95 E-value=1.2 Score=44.75 Aligned_cols=42 Identities=5% Similarity=0.147 Sum_probs=33.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHH----cCcc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFA----CSLL 344 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~----~gi~ 344 (793)
++.-+++.++++.+++.|+++.++||....+...++.. +|+-
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 33346788999999999999999999998877777664 6663
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=90.65 E-value=0.48 Score=47.18 Aligned_cols=40 Identities=18% Similarity=0.094 Sum_probs=31.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
.++.|++.+.++.|++.|+++.++|+... +..+-..+|+.
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~ 133 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELR 133 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhc
Confidence 35789999999999999999999998643 44455666664
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=89.74 E-value=4.5 Score=40.42 Aligned_cols=39 Identities=26% Similarity=0.249 Sum_probs=32.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 341 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~ 341 (793)
+.+-+++.++|+.|+++|++++++||+...+...++..+
T Consensus 16 ~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l 54 (263)
T 1zjj_A 16 NRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKL 54 (263)
T ss_dssp TEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHH
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 334489999999999999999999999988877777653
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=89.45 E-value=0.36 Score=43.80 Aligned_cols=39 Identities=21% Similarity=0.091 Sum_probs=33.1
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCc---hhhHHHHHHHcCc
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDK---METAINIGFACSL 343 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~---~~ta~~ia~~~gi 343 (793)
+-+++.++|+.|+++|++++++||++ ...+.....+.|+
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi 66 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL 66 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCC
Confidence 45789999999999999999999997 5566677777776
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=89.27 E-value=0.16 Score=49.62 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=25.4
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhh
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMET 333 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~t 333 (793)
+.+++.+.++.|+++|+++.++||.....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTK 117 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence 46789999999999999999999987543
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=88.71 E-value=0.11 Score=53.97 Aligned_cols=37 Identities=24% Similarity=0.249 Sum_probs=27.9
Q ss_pred cCCCCCCceeccCCchhhc---------cCceEEEecCCccccccee
Q 003824 3 YEETDKPARARTSNLNEEL---------GQVDTILSDKTGTLTCNSM 40 (793)
Q Consensus 3 ~~~~~~~~~~r~~~~~E~L---------g~v~~i~sDKTGTLT~n~m 40 (793)
.+-.+.++++|+...+|++ .++. |++|||||||+...
T Consensus 14 p~l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 14 PEFQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GGGTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HHHhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 3456788999999998873 3444 56799999998643
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=81.65 E-value=1.5 Score=47.74 Aligned_cols=26 Identities=31% Similarity=0.498 Sum_probs=24.4
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCc
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDK 330 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~ 330 (793)
+-+++.++|+.|+++|+++.++|+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999965
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=81.37 E-value=0.69 Score=51.61 Aligned_cols=26 Identities=19% Similarity=0.232 Sum_probs=24.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCC
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGD 329 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD 329 (793)
++.+++.++++.|+++|+++.++|+-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999999999985
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 793 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 5e-30 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 3e-20 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-14 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 6e-07 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 5e-06 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 5e-04 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 6e-04 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 0.001 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 0.001 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 0.002 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 116 bits (292), Expect = 5e-30
Identities = 39/230 (16%), Positives = 70/230 (30%), Gaps = 35/230 (15%)
Query: 87 GFNFEDERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFV 146
+ E E + N + D + + + A+C+ + + +E G E A
Sbjct: 28 TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEK-VGEATETALT 86
Query: 147 IAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGT 206
++ E ++S E + + + LEFS RK MSV + +
Sbjct: 87 TLVEKMNVFNTEV--RNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSS 144
Query: 207 -----LLLLSKGADSVMFER-----LAENGREFEEQTKEHINE------YADAGLRTLIL 250
+ KGA + +R + KE I LR L L
Sbjct: 145 RAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLAL 204
Query: 251 AYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATA 300
A R+ K + ++ + E +L +G
Sbjct: 205 ATRDTPPKREEMVLDD----------------SSRFMEYETDLTFVGVVG 238
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 88.0 bits (217), Expect = 3e-20
Identities = 31/214 (14%), Positives = 66/214 (30%), Gaps = 46/214 (21%)
Query: 103 EPHADVIQKFLRLLAICHTALPEVDEENGKISYEAE--SPDEAAFVIAARELGFEFYERT 160
+ + R+ +C+ A+ + +EN +S E+A +
Sbjct: 28 DKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSV---- 83
Query: 161 QTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSE--EGTLLLLSKGADSVM 218
K+ + + F+S+ K I E + +L+ KGA +
Sbjct: 84 --------------RKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERI 129
Query: 219 FERLA---------ENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTE 269
+R + +E ++ + E G R L L ++ + +
Sbjct: 130 LDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKF--- 186
Query: 270 AKNSVSADREELAEEIAEKIEKNLILLGATAVED 303
D +EL + L +G ++ D
Sbjct: 187 -------DTDEL-----NFPTEKLCFVGLMSMID 208
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 73.7 bits (180), Expect = 2e-14
Identities = 38/352 (10%), Positives = 81/352 (23%), Gaps = 91/352 (25%)
Query: 164 ISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLA 223
+ E + + + + L + + + + L + A + + A
Sbjct: 105 MYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVSDA 164
Query: 224 ENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAE 283
K + A + L + ++ E K F
Sbjct: 165 T-----LFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTF---------------- 203
Query: 284 EIAEKIEKNLILLGATAVEDKLQN--GVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 341
G E L+ V ++ L AG +L + TG +
Sbjct: 204 -----------KTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL 252
Query: 342 SLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPL 401
LL I ++ ++ + + + P
Sbjct: 253 GLLPYFEADFIATA--------------------------SDVLEAENMYPQARPLGKPN 286
Query: 402 ALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIG 461
A++ + + + +G
Sbjct: 287 PFSY-----------------------IAALYGNNRDKYESYINKQDNIVNK-DDVFIVG 322
Query: 462 DGANDVGMLQEAD---IGV--GISGVEGMQAVMSS--DIAIAQFRFLERLLL 506
D D+ Q+ IG G+ G + + + D I L +L
Sbjct: 323 DSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLD 374
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 47.9 bits (113), Expect = 6e-07
Identities = 38/209 (18%), Positives = 61/209 (29%), Gaps = 58/209 (27%)
Query: 292 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQV 351
+ T D + V I AGI++ ++TGD TAI I R++
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC----------RRI 57
Query: 352 IISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLT 411
I E E + ++ T
Sbjct: 58 GIFGENEE---------------------------------------------VADRAYT 72
Query: 412 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQ 471
DD+ A A + +V T GDG ND L+
Sbjct: 73 GREFDDLPLAEQREACRRACCFARVEPSHKSKIVEY--LQSYDEITAMTGDGVNDAPALK 130
Query: 472 EADIGVGISGVEGMQAVMSSDIAIAQFRF 500
+A+IG+ + A +S++ +A F
Sbjct: 131 KAEIGIAMGSGT-AVAKTASEMVLADDNF 158
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.1 bits (108), Expect = 5e-06
Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 1/75 (1%)
Query: 428 GCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQA 487
G S + ++ L + + IGDGA D+ AD +G G Q
Sbjct: 141 GFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQ 200
Query: 488 VM-SSDIAIAQFRFL 501
V ++ I F L
Sbjct: 201 VKDNAKWYITDFVEL 215
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 40.1 bits (92), Expect = 5e-04
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 457 TLAIGDGANDVGMLQEADIGVGISG 481
TL +GDG ND +L+ D V + G
Sbjct: 206 TLGLGDGPNDAPLLEVMDYAVIVKG 230
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 40.0 bits (92), Expect = 6e-04
Identities = 20/181 (11%), Positives = 48/181 (26%), Gaps = 11/181 (6%)
Query: 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESK 361
+ E I + GI + ++TG+ ++ A + + + + +
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 362 TLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDL 421
S D+ + D L+I +++ ++ +
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTMPDR------RAGLVIMRETINVETVREIINE 130
Query: 422 FLELAIGCASVICCRSSPKQKALVTRLVKTK-----TSSTTLAIGDGANDVGMLQEADIG 476
+ S + + K +GDG ND+ +
Sbjct: 131 LNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK 190
Query: 477 V 477
V
Sbjct: 191 V 191
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 40.0 bits (93), Expect = 0.001
Identities = 38/276 (13%), Positives = 81/276 (29%), Gaps = 29/276 (10%)
Query: 475 IGVGISGV-EGMQAVMSSDIAIAQFRFLERLLLVH--------GHWCYRRISSMICYFFY 525
+ + ++ + EG+ AV+++ +A+ R ++ +V G Y + I Y
Sbjct: 185 VALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLIS 244
Query: 526 KNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGV-------------- 571
N+ +F A L N+ LP ALG
Sbjct: 245 SNVGEVVCIFLTAA---LGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRS 301
Query: 572 FDQDVSARFCLKFPL---LYQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQA 628
+ + + + + Y +W + GV + F
Sbjct: 302 PKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHF 361
Query: 629 FRKGGEVIGLEILGTTMYTCVVWVVNCQMALSVTYFTYIQHLFIWGGITFWYIFLLAYGA 688
E+ T + +V + C S++ + + W I L+
Sbjct: 362 EGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSL 421
Query: 689 MDPYISTTAYKVFIEACAPAPSFWLITLLVLMSSLL 724
+ + + A + WL+ L + + +
Sbjct: 422 HFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIG 457
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 39.3 bits (90), Expect = 0.001
Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 2/68 (2%)
Query: 412 YALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK--TSSTTLAIGDGANDVGM 469
E+ + + ++ +G +S K KA L K + A+GD ND M
Sbjct: 152 DGWEEVLVEGGFKVTMGSRFYTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPM 211
Query: 470 LQEADIGV 477
+ D
Sbjct: 212 FEVVDKVF 219
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 37.0 bits (85), Expect = 0.002
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 292 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKME 332
+ D L+ + +L + GIK+ ++TGD
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWR 49
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 793 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.95 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.94 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.91 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.91 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.9 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.65 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.97 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.97 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.93 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.87 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.86 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.8 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.79 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.68 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.67 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.63 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.61 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.59 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.57 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.47 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.38 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.32 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.22 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.08 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.64 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.61 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.59 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.39 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.06 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.0 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.98 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.92 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.79 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.33 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.2 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.14 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 95.9 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.71 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.69 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.69 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 95.61 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.2 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 95.16 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 95.06 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 94.54 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 94.46 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 94.09 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 93.55 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 92.75 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 92.07 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 91.38 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 89.15 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 89.09 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 88.48 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 87.43 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 85.94 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 83.58 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.95 E-value=9.6e-28 Score=227.53 Aligned_cols=148 Identities=22% Similarity=0.320 Sum_probs=120.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
||+|++++++|+.|+++||++||+|||+..||.++|+++||+.++..+.
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~------------------------------- 67 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA------------------------------- 67 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCT-------------------------------
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccc-------------------------------
Confidence 9999999999999999999999999999999999999999987653210
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcC
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 462 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 462 (793)
...++|..+......+..+... +..+|+|++|+||..+|+.+|+ .|++|+|+||
T Consensus 68 -------------------~~~~~~~~~~~~~~~~~~~~~~------~~~v~ar~~p~~K~~lv~~l~~-~g~~Va~vGD 121 (168)
T d1wpga2 68 -------------------DRAYTGREFDDLPLAEQREACR------RACCFARVEPSHKSKIVEYLQS-YDEITAMTGD 121 (168)
T ss_dssp -------------------TTEEEHHHHHHSCHHHHHHHHH------HCCEEESCCHHHHHHHHHHHHH-TTCCEEEEEC
T ss_pred -------------------cccccccccchhhHHHHhhhhh------hhhhhhccchhHHHHHHHHHHh-cccceeEEec
Confidence 0134455554443334433333 2349999999999999999998 8999999999
Q ss_pred CccChhhhhhcceeEEeccCCcccccccCCeeecc--hhhHHHHHHHhh
Q 003824 463 GANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERLLLVHG 509 (793)
Q Consensus 463 G~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~--f~~l~~lll~~G 509 (793)
|.||++||++|||||++. +....|+++||+++.+ |..+.++ +.+|
T Consensus 122 G~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~-I~~G 168 (168)
T d1wpga2 122 GVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAA-VEEG 168 (168)
T ss_dssp SGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHH-HHHH
T ss_pred CCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHH-HHcC
Confidence 999999999999999995 3333488999999998 5557777 6776
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.94 E-value=7.4e-28 Score=239.73 Aligned_cols=171 Identities=16% Similarity=0.187 Sum_probs=126.1
Q ss_pred chHHHHHHHHHHHhhccccccccCCCCc--eeeecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeE
Q 003824 105 HADVIQKFLRLLAICHTALPEVDEENGK--ISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYS 182 (793)
Q Consensus 105 ~~~~~~~~~~~lalc~~~~~~~~~~~~~--~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~ 182 (793)
.++.++.+++++++||++....+..... -....|+|+|.||+++|.+.|..... .+..|+
T Consensus 30 ~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~------------------~r~~~~ 91 (214)
T d1q3ia_ 30 RSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVRK------------------MRDRNP 91 (214)
T ss_dssp CSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHHH------------------HHHTSC
T ss_pred CCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHHH------------------HHhhCc
Confidence 3466788999999999998754432111 01125799999999999988865433 236788
Q ss_pred EeEeeCCCCCCceEEEEEEcC--CCcEEEEEecCchHhHHHHhhc---------chhhHHHHHHHHHHHHhccceEEEEE
Q 003824 183 LLNVLEFSSSRKRMSVIVRSE--EGTLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEYADAGLRTLILA 251 (793)
Q Consensus 183 il~~~~F~s~rkrmsviv~~~--~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~~~~G~r~l~~a 251 (793)
++..+||+|.||||+++++.+ ++.+++|+|||||+|+++|+.. +++.++.+.+.+++|+.+|+|||++|
T Consensus 92 ~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A 171 (214)
T d1q3ia_ 92 KVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFC 171 (214)
T ss_dssp EEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEE
Confidence 899999999999999999976 4578999999999999999853 45678889999999999999999999
Q ss_pred EEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCCC
Q 003824 252 YRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQNG 308 (793)
Q Consensus 252 ~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~~ 308 (793)
||+++.+++..|.. .+.+ ..+.+|+||+|+|++||+||+|++
T Consensus 172 ~k~l~~~~~~~~~~----------~~~~-----~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 172 QLNLPSGKFPRGFK----------FDTD-----ELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EEEECTTTSCTTCC----------CCTT-----TTSSCCSSEEEEEEEEEESCCSCC
T ss_pred EEecCccccccccc----------cChh-----hhhhhcCCCEEEEEEEEEeCCCCC
Confidence 99998876544321 0111 124567999999999999999975
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.91 E-value=1.4e-24 Score=197.13 Aligned_cols=123 Identities=24% Similarity=0.330 Sum_probs=102.1
Q ss_pred CceEEEEEeeecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHH
Q 003824 292 NLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSA 371 (793)
Q Consensus 292 ~l~~lG~~~ieD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 371 (793)
|.+..+.++++|++|++++++|+.|+++||++||+|||+.++|.++|++|||-
T Consensus 9 d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~--------------------------- 61 (135)
T d2b8ea1 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--------------------------- 61 (135)
T ss_dssp ECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS---------------------------
T ss_pred CCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh---------------------------
Confidence 45556689999999999999999999999999999999999999999999972
Q ss_pred HHHHHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHh
Q 003824 372 AAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKT 451 (793)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~ 451 (793)
.++++++|++|..+|+.+|+
T Consensus 62 ------------------------------------------------------------~v~~~~~p~~k~~~v~~~q~ 81 (135)
T d2b8ea1 62 ------------------------------------------------------------LVIAEVLPHQKSEEVKKLQA 81 (135)
T ss_dssp ------------------------------------------------------------EEECSCCHHHHHHHHHHHTT
T ss_pred ------------------------------------------------------------hhccccchhHHHHHHHHHHc
Confidence 18999999999999999975
Q ss_pred cCCCeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc--hhhHHHH
Q 003824 452 KTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ--FRFLERL 504 (793)
Q Consensus 452 ~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~--f~~l~~l 504 (793)
+.+|+|+|||.||+|||++|||||++.+.. ..++++||+++.+ ++.+..+
T Consensus 82 --~~~v~~vGDg~nD~~aL~~Advgia~~~~~-~~~~~aADivl~~~~l~~i~~a 133 (135)
T d2b8ea1 82 --KEVVAFVGDGINDAPALAQADLGIAVGSGS-DVAVESGDIVLIRDDLRDVVAA 133 (135)
T ss_dssp --TSCEEEEECSSSSHHHHHHSSEEEEECCC---------SEEESSCCTHHHHHH
T ss_pred --CCEEEEEeCCCCcHHHHHhCCeeeecCccC-HHHHHhCCEEEECCCHHHHHHH
Confidence 579999999999999999999999996543 3389999999987 4445443
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.91 E-value=2.7e-29 Score=272.82 Aligned_cols=337 Identities=13% Similarity=0.060 Sum_probs=219.5
Q ss_pred ccCCchhhccCceEEEecCCcccccceeEEEEEEEcCEeeCCCccHHHHHHHhhcCCCCccchhhhhhcccccCCCCcCc
Q 003824 13 RTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGTSYGRGVTEVERAMARRKGSPLEEEVTEEQEDKASIKGFNFED 92 (793)
Q Consensus 13 r~~~~~E~Lg~v~~i~sDKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (793)
+-+...|.||...++|+|||||+|.|+|++..+. .+ ...... +. .+ |
T Consensus 28 ~ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~-------~~--~il~~~-k~-------------------~g--~-- 74 (380)
T d1qyia_ 28 ELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQ-------KD--KILNKL-KS-------------------LG--L-- 74 (380)
T ss_dssp HHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHT-------TT--HHHHHH-HH-------------------TT--C--
T ss_pred HHhhchhhcccceeeecCcccchhhhhheeeeec-------ch--hhhHhh-hh-------------------cC--C--
Confidence 3445679999999999999999999999764321 00 000000 00 00 0
Q ss_pred hhhhcCCCCCCCchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCC
Q 003824 93 ERIMNGSWVNEPHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPV 172 (793)
Q Consensus 93 ~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~ 172 (793)
+ + -.++....++|+.+..... .+.|++.+++..++..+..+..
T Consensus 75 ---------n----~-~~dl~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~-------------- 117 (380)
T d1qyia_ 75 ---------N----S-NWDMLFIVFSIHLIDILKK---------LSHDEIEAFMYQDEPVELKLQN-------------- 117 (380)
T ss_dssp ---------C----C-HHHHHHHHHHHHHHHHHTT---------SCHHHHHHHHHCSSCHHHHHTT--------------
T ss_pred ---------C----h-hHHHHHHHHHHHHHHHHhh---------cCCCcHHHHHHHHhhccchHHH--------------
Confidence 0 0 1345667777886643321 3578888888765543322211
Q ss_pred CCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCchHhHHHHhhcchhhHHHHHHHHHHHHhccceEEEEEE
Q 003824 173 TGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGADSVMFERLAENGREFEEQTKEHINEYADAGLRTLILAY 252 (793)
Q Consensus 173 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~ 252 (793)
....+.....+||+|.||+|+++....++.+..+.||+++.+.. .......+...+.+++.+|+|++++|+
T Consensus 118 ----~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~a~~~~r~l~~~~ 188 (380)
T d1qyia_ 118 ----ISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHV-----SDATLFSLKGALWTLAQEVYQEWYLGS 188 (380)
T ss_dssp ----SGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTTC-----SCCGGGSTTCHHHHHHHHHHHHHHHHH
T ss_pred ----HHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcCC-----cHHHHHHHHhHHHHHHHHHHHHHHHhh
Confidence 12445556678999999999998776555566666777765421 122344566788899999999999987
Q ss_pred EecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEeeecccCC--ChHHHHHHHHHcCCeEEEEeCCc
Q 003824 253 RELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAVEDKLQN--GVPECIDKLAQAGIKLWVLTGDK 330 (793)
Q Consensus 253 k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~ieD~lr~--~v~~~I~~L~~agIkv~mlTGD~ 330 (793)
+..++.+ .....+....|+++.+|+++| +++++|+.|+++||+++|+|||+
T Consensus 189 ~~~~~~~---------------------------~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~ 241 (380)
T d1qyia_ 189 KLYEDVE---------------------------KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRP 241 (380)
T ss_dssp HHHHHHH---------------------------CSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred hcccccc---------------------------cccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCC
Confidence 6543321 112245667799999999766 99999999999999999999999
Q ss_pred hhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhccccccCCCCCeEEEEeCchh
Q 003824 331 METAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKELLDSSNESLGPLALIIDGKSL 410 (793)
Q Consensus 331 ~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l 410 (793)
..+|..+++++||...-....++...+ +............ .+
T Consensus 242 ~~~a~~il~~lgl~~~F~~~~i~~~~d----------------------~~~~~~~~~~~~~-------------~~--- 283 (380)
T d1qyia_ 242 YTETVVPFENLGLLPYFEADFIATASD----------------------VLEAENMYPQARP-------------LG--- 283 (380)
T ss_dssp HHHHHHHHHHHTCGGGSCGGGEECHHH----------------------HHHHHHHSTTSCC-------------CC---
T ss_pred HHHHHHHHHHcCCcccCCcceEEecch----------------------hhhhhhhcccccc-------------cc---
Confidence 999999999999965321110111100 0000000000000 00
Q ss_pred hHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcc---eeEEec--cCCcc
Q 003824 411 TYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGANDVGMLQEAD---IGVGIS--GVEGM 485 (793)
Q Consensus 411 ~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~Ad---vGI~i~--g~~~~ 485 (793)
. .....+... ..++|++|.+|..+++.++. .++.|+|+|||.||++|.+.|| |||+++ |++..
T Consensus 284 ----K-P~p~~~~~~------~~~~~~~~~~k~~iv~~~~~-~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~ 351 (380)
T d1qyia_ 284 ----K-PNPFSYIAA------LYGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAA 351 (380)
T ss_dssp ----T-TSTHHHHHH------HHCCCGGGHHHHHHCCTTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGH
T ss_pred ----C-CChHHHHHH------HHHcCCCHHHHHHHHHHhCC-CCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccH
Confidence 0 001112211 26789999999999999987 8899999999999999999999 898663 33321
Q ss_pred c--ccccCCeeecchhhHHHHH
Q 003824 486 Q--AVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 486 ~--a~~~aD~~i~~f~~l~~ll 505 (793)
. ....||+++.++..+.++|
T Consensus 352 ~el~~~~AD~ii~~~~el~~il 373 (380)
T d1qyia_ 352 GELEAHHADYVINHLGELRGVL 373 (380)
T ss_dssp HHHHHTTCSEEESSGGGHHHHH
T ss_pred HHHHhCCCCEEECCHHHHHHHH
Confidence 0 2237999999999988774
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.90 E-value=2.7e-24 Score=217.71 Aligned_cols=179 Identities=21% Similarity=0.227 Sum_probs=129.8
Q ss_pred CchHHHHHHHHHHHhhccccccccCCCCceeeecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeEE
Q 003824 104 PHADVIQKFLRLLAICHTALPEVDEENGKISYEAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSL 183 (793)
Q Consensus 104 ~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~i 183 (793)
...+.+++++.+++|||++....++..+.. ...++|+|.||+.+|.+.|+.........- ...........+..|++
T Consensus 45 ~~~~~l~~ll~~~~LCn~a~l~~~~~~~~~-~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 121 (239)
T d1wpga3 45 GQFDGLVELATICALCNDSSLDFNETKGVY-EKVGEATETALTTLVEKMNVFNTEVRNLSK--VERANACNSVIRQLMKK 121 (239)
T ss_dssp GGCHHHHHHHHHHHHSCSCEEEEETTTTEE-EEESCHHHHHHHHHHHHHCTTCCCCSSSCH--HHHTTHHHHHHHHHEEE
T ss_pred cccHHHHHHHHHHHhcCCCEeeecCCCCeE-EEcCCCCcHHHHHHHHHhCCChHHhhccch--hhhhccchhhhhhhCeE
Confidence 345678899999999999988665544443 345899999999999999986543211000 00000000112357999
Q ss_pred eEeeCCCCCCceEEEEEEcCCC-----cEEEEEecCchHhHHHHhhc---------chhhHHHHHHHHHHH--HhccceE
Q 003824 184 LNVLEFSSSRKRMSVIVRSEEG-----TLLLLSKGADSVMFERLAEN---------GREFEEQTKEHINEY--ADAGLRT 247 (793)
Q Consensus 184 l~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~~~~~--~~~G~r~ 247 (793)
+..+||||+||||||+++.+++ .+++|+|||||.|+++|+.. +.+.++.+.+.++++ +.+|+||
T Consensus 122 v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRv 201 (239)
T d1wpga3 122 EFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRC 201 (239)
T ss_dssp EEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEE
T ss_pred EEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEE
Confidence 9999999999999999998764 47899999999999999753 345677778888876 6899999
Q ss_pred EEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceEEEEEee
Q 003824 248 LILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLILLGATAV 301 (793)
Q Consensus 248 l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~lG~~~i 301 (793)
|++|||+++.++...+. .+. ...+.+|+||+|+|++||
T Consensus 202 La~A~k~~~~~~~~~~~-----------~~~-----~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 202 LALATRDTPPKREEMVL-----------DDS-----SRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp EEEEEESSCCCGGGCCT-----------TCG-----GGHHHHTCSEEEEEEEEE
T ss_pred EEEEEEECCcccccccc-----------cch-----hhHHHhcCCCEEEEEECC
Confidence 99999999865432110 011 123678999999999997
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.65 E-value=9.2e-16 Score=170.12 Aligned_cols=214 Identities=15% Similarity=0.105 Sum_probs=169.5
Q ss_pred hhhhHHhHhhHhHHHHHHHHHHHHHHHHHHHHHhcccCcccchhHHHHHHHHhhccccceeeecccCCCChHHhhhcchh
Q 003824 508 HGHWCYRRISSMICYFFYKNIAFGFTLFFFEAYASFSGQPVYNDWFLSLYNVFFTSLPVIALGVFDQDVSARFCLKFPLL 587 (793)
Q Consensus 508 ~GR~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~n~~~~~lp~l~l~~~~~~~~~~~~~~~P~l 587 (793)
.||..+.|+.|.+.|.+..|+..++..+++.++. ..+++++.|++|.|++++.+|+++++.++ ++++.|.+.|+
T Consensus 227 ~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~---~p~pl~~~qILwinli~d~lpaiaL~~ep--~d~~iM~~~Pr- 300 (472)
T d1wpga4 227 LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG---LPEALIPVQLLWVNLVTDGLPATALGFNP--PDLDIMDRPPR- 300 (472)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCSCCHHHHHHHHHTTTHHHHHHHTTCC--CCSGGGGSCCC-
T ss_pred HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcC---CCccccHHHHHHHHHHhHHHHHHHHhcCC--CchhhhcCCCC-
Confidence 3999999999999999999999999998887764 45679999999999999999999999864 44455555555
Q ss_pred hhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-----------------------CCCceeehhhHHHH
Q 003824 588 YQEGVQNILFSWTRILGWALNGVANAAIIFFFCIHAMKQQAFR-----------------------KGGEVIGLEILGTT 644 (793)
Q Consensus 588 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~-----------------------~~g~~~~~~~~~t~ 644 (793)
++++++++++++..++..|++.+++++.++++.+...... .+..........|+
T Consensus 301 ---~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~ 377 (472)
T d1wpga4 301 ---SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTM 377 (472)
T ss_dssp ---CTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHH
T ss_pred ---CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHH
Confidence 7788999999999999999999988887776654321100 00111123356789
Q ss_pred HHHHHHHHHHHHHHHHhcc-----h--hhHHHHHHHHHHHHHHHHHHHHhccCccccchhHHHHHHHhccChHHHHHHHH
Q 003824 645 MYTCVVWVVNCQMALSVTY-----F--TYIQHLFIWGGITFWYIFLLAYGAMDPYISTTAYKVFIEACAPAPSFWLITLL 717 (793)
Q Consensus 645 ~f~~~v~~~~~~~~l~~~~-----~--~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~s~~~wl~~l~ 717 (793)
+|+++++.+.++.. ..++ | .++.|.++++++++.+++++++.|+|+ ++. +|+..++++..|++++.
T Consensus 378 ~F~~lv~~q~~~~~-~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~-l~~-----vf~~~pL~~~~w~i~l~ 450 (472)
T d1wpga4 378 ALSVLVTIEMCNAL-NSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDP-LPM-----IFKLKALDLTQWLMVLK 450 (472)
T ss_dssp HHHHHHHHHHHHHH-TTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTT-THH-----HHTCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhH-HHH-----HHcccCCCHHHHHHHHH
Confidence 99999888777754 2222 1 245788889999999999988899985 455 78889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhC
Q 003824 718 VLMSSLLPYFTYSAIQMRFF 737 (793)
Q Consensus 718 ~~~~~ll~~~i~k~~~~~~~ 737 (793)
+++++++.+++.|++.|+|.
T Consensus 451 ~~~~~~~~~El~K~~~R~~~ 470 (472)
T d1wpga4 451 ISLPVIGLDEILKFIARNYL 470 (472)
T ss_dssp HHTHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999988774
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.97 E-value=6.8e-10 Score=109.09 Aligned_cols=132 Identities=19% Similarity=0.255 Sum_probs=93.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
+++|++.++|+.|++.|++++++||.....+..+++.+|+-..+ ++.-..
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~an~~---------------------------- 131 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANRL---------------------------- 131 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEECE----------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc--eeeeee----------------------------
Confidence 47899999999999999999999999999999999999984321 110000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCC-CeEEEEcC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTS-STTLAIGD 462 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~-~~vlaiGD 462 (793)
....+|....... .-....+..|+.+++.+++..+ +.++++||
T Consensus 132 ------------------~~~~~G~~~g~~~------------------~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGD 175 (217)
T d1nnla_ 132 ------------------KFYFNGEYAGFDE------------------TQPTAESGGKGKVIKLLKEKFHFKKIIMIGD 175 (217)
T ss_dssp ------------------EECTTSCEEEECT------------------TSGGGSTTHHHHHHHHHHHHHCCSCEEEEES
T ss_pred ------------------eeeehhcccccee------------------eeeeeccchHHHHHHHHHhccCccccEEEEe
Confidence 0000011000000 0011345679999999876433 57999999
Q ss_pred CccChhhhhhcceeEEeccCCc-ccccccCCeeecchhhH
Q 003824 463 GANDVGMLQEADIGVGISGVEG-MQAVMSSDIAIAQFRFL 501 (793)
Q Consensus 463 G~ND~~ml~~AdvGI~i~g~~~-~~a~~~aD~~i~~f~~l 501 (793)
|.||++|++.|++||++.++.. .+.++.+|+++.+|..|
T Consensus 176 s~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 176 GATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp SHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred CHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 9999999999999999976543 34567799999988764
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.97 E-value=1.6e-10 Score=114.20 Aligned_cols=181 Identities=12% Similarity=0.144 Sum_probs=97.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccc----cCceEEEEccCCCcccccchhhhHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR----QGMRQVIISSETPESKTLEKSEDKSAAAAALKAS 379 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (793)
.+.+.+.++|++|+++|++++++||+....+..+++..++-. .++..+............. .... ....
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~---~~~~----~~~~ 91 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMD---EEWI----LWNE 91 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCS---HHHH----HHHH
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeecccccccccccc---HHHH----HHHH
Confidence 467889999999999999999999999999999998887632 1222222111110000000 0011 1111
Q ss_pred HHHHHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhc-----CCeeEEEcCChhhHHHHHHHHHhcC-
Q 003824 380 VLHQLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIG-----CASVICCRSSPKQKALVTRLVKTKT- 453 (793)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~-----~~~vi~~r~sP~qK~~iv~~lk~~~- 453 (793)
+............. ......+.+....... +..++...++... ....+-.......|...++.+.++.
T Consensus 92 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~ 165 (230)
T d1wr8a_ 92 IRKRFPNARTSYTM---PDRRAGLVIMRETINV---ETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG 165 (230)
T ss_dssp HHHHCTTCCBCTTG---GGCSSCEEECTTTSCH---HHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT
T ss_pred HHHhcccccceeec---ccceeeEEEecccccH---HHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccc
Confidence 11111111111100 1111122222221110 0111111111110 0011111223457888888776643
Q ss_pred --CCeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecch
Q 003824 454 --SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 498 (793)
Q Consensus 454 --~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f 498 (793)
...|+++|||.||++|++.|++||+|.+.. ..++..||+++...
T Consensus 166 i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~-~~~k~~A~~v~~~~ 211 (230)
T d1wr8a_ 166 IKPKEVAHVGDGENDLDAFKVVGYKVAVAQAP-KILKENADYVTKKE 211 (230)
T ss_dssp SCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHTTCSEECSSC
T ss_pred cchhheeeeecCccHHHHHHHCCeEEEECCCC-HHHHHhCCEEECCC
Confidence 367999999999999999999999996554 44899999998763
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.93 E-value=5.6e-10 Score=113.52 Aligned_cols=192 Identities=13% Similarity=0.108 Sum_probs=102.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCC-------Ccc--cccchhhhHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSET-------PES--KTLEKSEDKSAAAA 374 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~-------~~~--~~~~~~~~~~~~~~ 374 (793)
++.+.+.++|++|+++||+++++||++...+..+.+++++..+...++..++.. ... ..+.. .....+..
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~-~~~~~i~~ 99 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSY-DDYRFLEK 99 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCH-HHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccH-HHHHHHHH
Confidence 477889999999999999999999999999999999998865543333322211 100 01111 11111111
Q ss_pred HHHHHHH-----------------------HHHhhhhhcc-ccc---c-CCCCCeEEEEeCchhhHhhhhhHHHHHHHHH
Q 003824 375 ALKASVL-----------------------HQLIRGKELL-DSS---N-ESLGPLALIIDGKSLTYALEDDVKDLFLELA 426 (793)
Q Consensus 375 ~~~~~~~-----------------------~~~~~~~~~~-~~~---~-~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~ 426 (793)
...+... .......... ... . .......+.++......-....+.+.+....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (271)
T d1rkqa_ 100 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 179 (271)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcce
Confidence 1100000 0000000000 000 0 0111222233322221111112222222111
Q ss_pred hcC-CeeEEEcCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 427 IGC-ASVICCRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 427 ~~~-~~vi~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
... ...-+...+|. .|+..++.+.+..+ ..++++|||.||++|++.|++||+|++.. ..++..||++...
T Consensus 180 ~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~-~~lk~~a~~i~~~ 255 (271)
T d1rkqa_ 180 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAI-PSVKEVANFVTKS 255 (271)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECCC
T ss_pred EEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCC-HHHHHhCCEEcCC
Confidence 000 00012334454 69999988877533 56999999999999999999999996654 4488999999875
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.87 E-value=2.8e-09 Score=108.11 Aligned_cols=64 Identities=19% Similarity=0.128 Sum_probs=51.5
Q ss_pred EcCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchh
Q 003824 435 CRSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 499 (793)
Q Consensus 435 ~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~ 499 (793)
..++|. .|+..++.+.++.| ..|+++|||.||.+||+.|+.||+|++.. ..++..||+++....
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~-~~lk~~A~~v~~~~~ 250 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAA-ENIKQIARYATDDNN 250 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCC-HHHHHHCSEECCCGG
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCC-HHHHHhCCEEcCCCC
Confidence 345554 59999988877544 57999999999999999999999996654 348999999987633
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.86 E-value=1e-08 Score=100.96 Aligned_cols=177 Identities=15% Similarity=0.159 Sum_probs=97.8
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccc----cCceEEEEccCCCcccccchhhhHHHHHHHHH
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR----QGMRQVIISSETPESKTLEKSEDKSAAAAALK 377 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 377 (793)
+.++.+++.++++.|++.|++++++||++...+..++...|+-. .++.. ..+............ .+
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~-~~~~~~~~~~~~~~~----~~----- 87 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGI-MFDNDGSIKKFFSNE----GT----- 87 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTE-EECTTSCEEESSCSH----HH-----
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceE-EEeCCccEEEecChH----HH-----
Confidence 34577899999999999999999999999998888888887632 11111 111111111111111 01
Q ss_pred HHHHHHHhhhhhc--cccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeE-----EEcCCh--hhHHHHHHH
Q 003824 378 ASVLHQLIRGKEL--LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVI-----CCRSSP--KQKALVTRL 448 (793)
Q Consensus 378 ~~~~~~~~~~~~~--~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi-----~~r~sP--~qK~~iv~~ 448 (793)
......+...... ...............+.... +............+ ++...| ..|+..++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~ 158 (225)
T d1l6ra_ 88 NKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDV---------DYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNK 158 (225)
T ss_dssp HHHHHHHTTTSSCBCCGGGGGCSSSEEEBCCGGGH---------HHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHH
T ss_pred HHHHHHHHHhcCcceeecccceeeeeccccCHHHH---------HHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHH
Confidence 1111111111000 00000011112222222211 12222222222222 222333 378888887
Q ss_pred HHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecch
Q 003824 449 VKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 498 (793)
Q Consensus 449 lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f 498 (793)
+.+..+ ..|+++|||.||.+|++.|++||+|++... .++..||++...-
T Consensus 159 l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~-~~k~~ad~v~~~~ 210 (225)
T d1l6ra_ 159 LKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD-NIKAVSDFVSDYS 210 (225)
T ss_dssp HHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCH-HHHHHCSEECSCC
T ss_pred HhhhhccchhheeeecCCcchHHHHHHCCeEEEECCCcH-HHHHhCCEEECCC
Confidence 765433 569999999999999999999999965543 3889999987663
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.80 E-value=5.1e-08 Score=99.26 Aligned_cols=61 Identities=23% Similarity=0.295 Sum_probs=50.6
Q ss_pred cCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 436 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 436 r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
.++|. .|+..++.+.+..| ..|+++|||.||.+||+.|+.||+|.+.. ..++..||++...
T Consensus 206 di~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~-~~~k~~A~~v~~~ 271 (285)
T d1nrwa_ 206 ELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAR-EDIKSIADAVTLT 271 (285)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCC-HHHHHHCSEECCC
T ss_pred EEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCC-HHHHHhCCEEcCC
Confidence 34554 79999998887654 57999999999999999999999996654 3489999999875
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.79 E-value=5.9e-09 Score=98.03 Aligned_cols=113 Identities=17% Similarity=0.150 Sum_probs=83.1
Q ss_pred HHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHHHhhhhhc
Q 003824 311 ECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQLIRGKEL 390 (793)
Q Consensus 311 ~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (793)
.+|+.|+..|+.+.++||+....+...+.++++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 47999999999999999999999999998887632
Q ss_pred cccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc---CCCeEEEEcCCccCh
Q 003824 391 LDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAIGDGANDV 467 (793)
Q Consensus 391 ~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~ND~ 467 (793)
++.- ...|...++.+.++ ....|+++||+.||.
T Consensus 74 ------------------------------------------~~~~--~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl 109 (177)
T d1k1ea_ 74 ------------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAYIGDDSVDL 109 (177)
T ss_dssp ------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred ------------------------------------------cccc--cccHHHHHHHHHHHhcCCcceeEEecCCccHH
Confidence 1111 12333333333222 347899999999999
Q ss_pred hhhhhcceeEEeccCCcccccccCCeeecc------hhhHHHHHH-HhhhhHH
Q 003824 468 GMLQEADIGVGISGVEGMQAVMSSDIAIAQ------FRFLERLLL-VHGHWCY 513 (793)
Q Consensus 468 ~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~------f~~l~~lll-~~GR~~~ 513 (793)
+||+.|++|+++.+.... ++..|||++.. .+-+..+|+ .+|+|.+
T Consensus 110 ~~l~~~g~siap~nA~~~-vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~~~ 161 (177)
T d1k1ea_ 110 PAFAACGTSFAVADAPIY-VKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 161 (177)
T ss_dssp HHHHHSSEEEECTTSCHH-HHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHhhCCeEEEcCCccHH-HHHhCCEEeCCCCCCchHHHHHHHHHHHCCChHH
Confidence 999999999999765544 89999999986 444555544 4577654
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.68 E-value=5.9e-09 Score=105.17 Aligned_cols=58 Identities=26% Similarity=0.377 Sum_probs=47.9
Q ss_pred hHHHHHHHHHhcC---CCeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchh
Q 003824 441 QKALVTRLVKTKT---SSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 499 (793)
Q Consensus 441 qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~ 499 (793)
.|+..++.+.++. ...++++|||.||++||+.|+.||+|.+... .++..||++....+
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~-~lk~~A~~vt~~~~ 246 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKE-DVKAAADYVTAPID 246 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHSSEECCCGG
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCH-HHHHhCCEEeCCCC
Confidence 6998888887653 3679999999999999999999999976543 38899999877643
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.67 E-value=5.8e-08 Score=95.24 Aligned_cols=40 Identities=8% Similarity=0.078 Sum_probs=37.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
.+.+.+.++|++|+++|++++++||++...+..+.+++++
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~ 60 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 60 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhcc
Confidence 4778999999999999999999999999999999999886
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.63 E-value=1.1e-07 Score=91.33 Aligned_cols=129 Identities=19% Similarity=0.124 Sum_probs=86.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
+..++....++.+ +.+.++.++|+.............++..............
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------------------------- 121 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccc--------------------------
Confidence 4566777777665 5789999999998888888888877643221111111110
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
.........+..+...++.++. ..+.|+|||||
T Consensus 122 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~i-~~~eviaiGDg 154 (206)
T d1rkua_ 122 ----------------------------------------------RVVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDS 154 (206)
T ss_dssp ----------------------------------------------CEEEEECCSSSHHHHHHHHHHH-TTCEEEEEECS
T ss_pred ----------------------------------------------ccccccccchhhHHHHHHHhcc-cccceEEecCC
Confidence 1112233344445556666665 77899999999
Q ss_pred ccChhhhhhcceeEEeccCCcccccccCCeeec-chhhHHHHHHH
Q 003824 464 ANDVGMLQEADIGVGISGVEGMQAVMSSDIAIA-QFRFLERLLLV 507 (793)
Q Consensus 464 ~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~-~f~~l~~lll~ 507 (793)
.||++||+.|++|||| +......++++||+.. ++..+...++.
T Consensus 155 ~NDi~Ml~~Ag~gIAm-na~~~v~~~~~~~~~~~~~~d~~~~~~~ 198 (206)
T d1rkua_ 155 YNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFLK 198 (206)
T ss_dssp STTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHHHHHHH
T ss_pred ccCHHHHHhCCccEEE-CCCHHHHHhCCCceeecCHHHHHHHHHH
Confidence 9999999999999999 5444436678899764 47777776443
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.61 E-value=7.5e-08 Score=95.32 Aligned_cols=42 Identities=7% Similarity=0.030 Sum_probs=37.9
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCc
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSL 343 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi 343 (793)
.+...+.+.++|++|+++|++++++||++...+..+.+.+++
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~ 56 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEV 56 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcc
Confidence 455567899999999999999999999999999999999886
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.59 E-value=2.6e-08 Score=101.22 Aligned_cols=56 Identities=16% Similarity=0.234 Sum_probs=46.2
Q ss_pred hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecc
Q 003824 441 QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQ 497 (793)
Q Consensus 441 qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~ 497 (793)
.|+..++.+.+..+ ..|+++|||.||.+||+.|++||+|++.. ..++..||+++..
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~-~~~k~~a~~v~~~ 265 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANAT-DSAKSHAKCVLPV 265 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCC-HHHHHHSSEECSS
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCC-HHHHHhCCEEECC
Confidence 58877777766433 68999999999999999999999996554 3489999999864
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.57 E-value=6.9e-09 Score=105.11 Aligned_cols=63 Identities=24% Similarity=0.354 Sum_probs=51.0
Q ss_pred cCChh--hHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchh
Q 003824 436 RSSPK--QKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFR 499 (793)
Q Consensus 436 r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~ 499 (793)
.++|. .|+..++.+.++.+ ..|++||||.||.+||+.|++||+|++.. ..++..||+++.+.+
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~-~~~k~~A~~i~~~~~ 250 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAI-EKVKEASDIVTLTNN 250 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSC-HHHHHHCSEECCCTT
T ss_pred eecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCC-HHHHHhCCEEcCCCC
Confidence 35554 69999988876533 56999999999999999999999996554 348999999987644
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.47 E-value=1.5e-07 Score=92.24 Aligned_cols=136 Identities=13% Similarity=0.099 Sum_probs=92.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCce-EEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMR-QVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
++.|++.+.++.|++.|+++.++||-....+..+.+.+|+...-.. ...++++..
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~------------------------ 130 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYI------------------------ 130 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBC------------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcc------------------------
Confidence 4789999999999999999999999999999999998887432100 011111100
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcC
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGD 462 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGD 462 (793)
...+... ....++...|..|..+++.++. ....|++|||
T Consensus 131 ---------------------~~~~~~~-------------------~~~~~~~~k~~~~~~~~~~~~~-~~~~~i~iGD 169 (226)
T d2feaa1 131 ---------------------HIDWPHS-------------------CKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGD 169 (226)
T ss_dssp ---------------------EEECTTC-------------------CCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEEC
T ss_pred ---------------------eeccccc-------------------cccccccCCHHHHHHHHHHhcC-CCceEEEEeC
Confidence 0000000 0113456788899999998876 7789999999
Q ss_pred CccChhhhhhcceeEEeccCCcccccccC-CeeecchhhHHHH
Q 003824 463 GANDVGMLQEADIGVGISGVEGMQAVMSS-DIAIAQFRFLERL 504 (793)
Q Consensus 463 G~ND~~ml~~AdvGI~i~g~~~~~a~~~a-D~~i~~f~~l~~l 504 (793)
+.||.+|+++||+++++.+....-..... ...+.+|+.+...
T Consensus 170 s~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~ 212 (226)
T d2feaa1 170 SVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKE 212 (226)
T ss_dssp CGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHH
T ss_pred chhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHH
Confidence 99999999999999988542211012223 3445667776655
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.38 E-value=4.8e-07 Score=88.26 Aligned_cols=65 Identities=17% Similarity=0.222 Sum_probs=48.8
Q ss_pred EcCChh--hHHHHHHHHHhcCCCeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCeeecchhhHHHH
Q 003824 435 CRSSPK--QKALVTRLVKTKTSSTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 435 ~r~sP~--qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f~~l~~l 504 (793)
..+.|. .|+..++.+.+ ...++++||+.||.+|++.|+.|++|...+ ++.+|++.+.+-..+..+
T Consensus 151 idi~p~g~~Kg~al~~l~~--~~~~i~~GDs~ND~~Mf~~~~~~~av~~g~---~~~~A~~~~~~~~ev~~~ 217 (229)
T d1u02a_ 151 IELRVPGVNKGSAIRSVRG--ERPAIIAGDDATDEAAFEANDDALTIKVGE---GETHAKFHVADYIEMRKI 217 (229)
T ss_dssp EEEECTTCCHHHHHHHHHT--TSCEEEEESSHHHHHHHHTTTTSEEEEESS---SCCCCSEEESSHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHhc--cccceeecCCCChHHHHhccCCeEEEEeCC---CCccCeEEcCCHHHHHHH
Confidence 344444 69999999976 457889999999999999998887774333 346889999876554444
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.32 E-value=5e-07 Score=86.73 Aligned_cols=124 Identities=20% Similarity=0.188 Sum_probs=80.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHH
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLH 382 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (793)
.++.+++.+.++.++..|..+.++||.....+.......+....-...+......
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------- 128 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK------------------------- 128 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE-------------------------
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccc-------------------------
Confidence 3688999999999999999999999999888888887766532111111000000
Q ss_pred HHhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc---CCCeEEE
Q 003824 383 QLIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLA 459 (793)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vla 459 (793)
..... ...-..+..|...+..+... ....+++
T Consensus 129 ------------------~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 163 (210)
T d1j97a_ 129 ------------------LTGDV---------------------------EGEVLKENAKGEILEKIAKIEGINLEDTVA 163 (210)
T ss_dssp ------------------EEEEE---------------------------ECSSCSTTHHHHHHHHHHHHHTCCGGGEEE
T ss_pred ------------------ccccc---------------------------cccccccccccchhhhHHHHhcccccceEE
Confidence 00000 00001122233333322221 3467999
Q ss_pred EcCCccChhhhhhcceeEEeccCCcccccccCCeeecch
Q 003824 460 IGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQF 498 (793)
Q Consensus 460 iGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~~i~~f 498 (793)
+|||.||++|++.|++||+|.+.+. .+..||+++...
T Consensus 164 iGDs~nDi~m~~~ag~~va~na~~~--lk~~Ad~vi~~~ 200 (210)
T d1j97a_ 164 VGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEKR 200 (210)
T ss_dssp EESSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSS
T ss_pred ecCCcChHHHHHHCCCCEEECCCHH--HHHhCCEEEcCC
Confidence 9999999999999999999944443 678999999753
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.22 E-value=9.3e-07 Score=87.51 Aligned_cols=54 Identities=24% Similarity=0.342 Sum_probs=43.2
Q ss_pred hhhHHHHHHHHHhcCC---CeEEEEcCCccChhhhhhcceeEEeccCCcccccccCCe
Q 003824 439 PKQKALVTRLVKTKTS---STTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDI 493 (793)
Q Consensus 439 P~qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGI~i~g~~~~~a~~~aD~ 493 (793)
...|+..++.+.+..| ..|+++|||.||.+||+.|+.||+|.+.... ++..||.
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~-lk~~a~~ 216 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPE-LLHWYDQ 216 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHH-HHHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHH-HHHHhhc
Confidence 3469998888887654 5699999999999999999999999654443 6666663
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.08 E-value=1.9e-06 Score=84.35 Aligned_cols=54 Identities=15% Similarity=0.270 Sum_probs=44.5
Q ss_pred hHHHHHHHHHhcCCCeEEEEcC----CccChhhhhhcc-eeEEeccCCcccccccCCeee
Q 003824 441 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVEGMQAVMSSDIAI 495 (793)
Q Consensus 441 qK~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~Ad-vGI~i~g~~~~~a~~~aD~~i 495 (793)
.|+..++.|.+.....|+++|| |.||.+||+.|+ .|+++++.+.. ++..+|+++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~-~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT-VQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHH-HHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHH-HHHHHHhcC
Confidence 6998899887766689999999 569999999997 69999776554 677777765
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.64 E-value=1.6e-05 Score=77.52 Aligned_cols=44 Identities=25% Similarity=0.418 Sum_probs=34.0
Q ss_pred hHHHHHHHHHhcCCCeEEEEcC----CccChhhhhhcc-eeEEeccCCc
Q 003824 441 QKALVTRLVKTKTSSTTLAIGD----GANDVGMLQEAD-IGVGISGVEG 484 (793)
Q Consensus 441 qK~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~Ad-vGI~i~g~~~ 484 (793)
+|+..++.+.....+.|++||| |.||.+||+.|+ .|+++++.+.
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~ 233 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED 233 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHH
Confidence 6888888876656688999999 889999999997 6777765443
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.61 E-value=5.6e-05 Score=72.70 Aligned_cols=124 Identities=18% Similarity=0.109 Sum_probs=83.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++++.++.|++.|+++.++||.....+..+.+.+||...-...+ .....
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~-~~~~~-------------------------- 147 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEML-GGQSL-------------------------- 147 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEE-CTTTS--------------------------
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccc-ccccc--------------------------
Confidence 468999999999999999999999999999999999999853211111 00000
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
-...-.|+--..+.+.++- ....+++|||+
T Consensus 148 -------------------------------------------------~~~kp~p~~~~~~~~~~~~-~~~~~~~igD~ 177 (224)
T d2hsza1 148 -------------------------------------------------PEIKPHPAPFYYLCGKFGL-YPKQILFVGDS 177 (224)
T ss_dssp -------------------------------------------------SSCTTSSHHHHHHHHHHTC-CGGGEEEEESS
T ss_pred -------------------------------------------------ccccccchhhHHHHHHhhh-hhhccchhcCc
Confidence 0011122222233333333 55789999999
Q ss_pred ccChhhhhhcce-eEEecc---CCcccccccCCeeecchhhHHHH
Q 003824 464 ANDVGMLQEADI-GVGISG---VEGMQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 464 ~ND~~ml~~Adv-GI~i~g---~~~~~a~~~aD~~i~~f~~l~~l 504 (793)
.+|+.+-+.|++ .|++.. .........+|+++.++..|.++
T Consensus 178 ~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~i 222 (224)
T d2hsza1 178 QNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 222 (224)
T ss_dssp HHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred HHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHh
Confidence 999999999997 455531 11112345689999998887765
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.59 E-value=4.6e-05 Score=67.60 Aligned_cols=108 Identities=17% Similarity=0.295 Sum_probs=76.6
Q ss_pred ecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCc
Q 003824 136 EAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGAD 215 (793)
Q Consensus 136 ~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 215 (793)
.++||...|+|++|++.+...... ..+.-....+|+..++...+.+ +| ..+..|++
T Consensus 28 ~SeHPlakAIv~~Ak~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~g~~~---~g--~~v~~G~~ 83 (136)
T d2a29a1 28 ADETPEGRSIVILAKQRFNLRERD-------------------VQSLHATFVPFTAQSRMSGINI---DN--RMIRKGSV 83 (136)
T ss_dssp TCCSHHHHHHHHHHHHHHCCCCCC-------------------TTTTTCEEEEEETTTTEEEEEE---TT--EEEEEECH
T ss_pred CCCchHHHHHHHHHHHhcCCCccc-------------------cccccccccccccccceEEEEE---CC--EEEEecHH
Confidence 367999999999999876433210 1111112345555554444333 34 46677999
Q ss_pred hHhHHHHhhcchhhHHHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHhhcCceE
Q 003824 216 SVMFERLAENGREFEEQTKEHINEYADAGLRTLILAYRELDEKEYKQFNEEFTEAKNSVSADREELAEEIAEKIEKNLIL 295 (793)
Q Consensus 216 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~a~~~~~~~r~~~~~~~~~~ie~~l~~ 295 (793)
..|.+.+...+......+.+.++.++.+|..++.+| .|-.+
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va---------------------------------------~d~~~ 124 (136)
T d2a29a1 84 DAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVV---------------------------------------EGSRV 124 (136)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEE---------------------------------------ETTEE
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHCCCeEEEEE---------------------------------------ECCEE
Confidence 988877766555567788899999999999999999 56789
Q ss_pred EEEEeeecccC
Q 003824 296 LGATAVEDKLQ 306 (793)
Q Consensus 296 lG~~~ieD~lr 306 (793)
+|++++.|++|
T Consensus 125 ~G~i~l~D~iK 135 (136)
T d2a29a1 125 LGVIALKDIVK 135 (136)
T ss_dssp EEEEEEEESSC
T ss_pred EEEEEEEeecC
Confidence 99999999986
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.39 E-value=0.00028 Score=67.40 Aligned_cols=121 Identities=12% Similarity=0.125 Sum_probs=80.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.||+.++++.|++.|+++.++||.....+..+.+..|+..--..
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~---------------------------------- 133 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDA---------------------------------- 133 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccccc----------------------------------
Confidence 3569999999999999999999999999999999999998432111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
++.++... .++-.|+-=..+++.+.- ....+++|||+
T Consensus 134 --------------------i~~~~~~~----------------------~~Kp~~~~~~~~~~~l~~-~~~~~l~igD~ 170 (218)
T d1te2a_ 134 --------------------LASAEKLP----------------------YSKPHPQVYLDCAAKLGV-DPLTCVALEDS 170 (218)
T ss_dssp --------------------EEECTTSS----------------------CCTTSTHHHHHHHHHHTS-CGGGEEEEESS
T ss_pred --------------------cccccccc----------------------cchhhHHHHHHHHHHcCC-CchhcEEEeeC
Confidence 11111110 011112212233333332 45789999999
Q ss_pred ccChhhhhhcceeE-EeccCCc--ccccccCCeeecchhhH
Q 003824 464 ANDVGMLQEADIGV-GISGVEG--MQAVMSSDIAIAQFRFL 501 (793)
Q Consensus 464 ~ND~~ml~~AdvGI-~i~g~~~--~~a~~~aD~~i~~f~~l 501 (793)
.+|+.|-+.|++.. ++.+... ......||+++.++..|
T Consensus 171 ~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el 211 (218)
T d1te2a_ 171 VNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL 211 (218)
T ss_dssp HHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGC
T ss_pred HHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhC
Confidence 99999999999744 5533222 11235689999998865
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.06 E-value=0.00036 Score=69.74 Aligned_cols=45 Identities=16% Similarity=0.279 Sum_probs=41.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGM 348 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~ 348 (793)
+||+|+++.++.|++.|+++.++||--...+..++++.|+..++.
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni 179 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV 179 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCc
Confidence 489999999999999999999999999999999999999865543
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.00 E-value=0.00038 Score=67.10 Aligned_cols=42 Identities=24% Similarity=0.209 Sum_probs=37.3
Q ss_pred ccCCChHHHHHHHHHcC-CeEEEEeCCchhhHHHHHHHcCccc
Q 003824 304 KLQNGVPECIDKLAQAG-IKLWVLTGDKMETAINIGFACSLLR 345 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~ag-Ikv~mlTGD~~~ta~~ia~~~gi~~ 345 (793)
++-||+.++++.|++.| +++.++||.....+..+.+..|+..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~ 133 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH 133 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc
Confidence 45689999999999987 8999999999999999999998853
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.98 E-value=0.00077 Score=63.78 Aligned_cols=118 Identities=15% Similarity=0.115 Sum_probs=79.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.+++.+.++.|+..+ ++.++|+.....+..+....|+...-..
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~---------------------------------- 128 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDG---------------------------------- 128 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccccc----------------------------------
Confidence 57899999999999775 8999999999999999998887532111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhc---CCCeEEEE
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTK---TSSTTLAI 460 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlai 460 (793)
++.+...+..|..+.+.+.+. ....+++|
T Consensus 129 ------------------------------------------------v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~V 160 (210)
T d2ah5a1 129 ------------------------------------------------IYGSSPEAPHKADVIHQALQTHQLAPEQAIII 160 (210)
T ss_dssp ------------------------------------------------EEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred ------------------------------------------------cccccccccccccccchhhhhhhcccccceee
Confidence 122222233333333333332 34679999
Q ss_pred cCCccChhhhhhcce-eEEec-cCCccc--ccccCCeeecchhhHHHH
Q 003824 461 GDGANDVGMLQEADI-GVGIS-GVEGMQ--AVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 461 GDG~ND~~ml~~Adv-GI~i~-g~~~~~--a~~~aD~~i~~f~~l~~l 504 (793)
||+.+|+.|-+.|++ .|++. |....+ ....+|+++.++..|...
T Consensus 161 GDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~ 208 (210)
T d2ah5a1 161 GDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp ESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred cCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 999999999999998 56663 221111 223489999887776543
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.92 E-value=0.00055 Score=67.24 Aligned_cols=41 Identities=32% Similarity=0.294 Sum_probs=37.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+|+.++++.|++.|+++.++||.....+..+.+..|+.
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~ 139 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 139 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhc
Confidence 58899999999999999999999999999998888888874
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.79 E-value=0.00093 Score=62.93 Aligned_cols=40 Identities=20% Similarity=0.201 Sum_probs=33.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.||+.++++.|++.|+++.++|+... .+..+.+..|+.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~ 121 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVE 121 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCG
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccc
Confidence 4679999999999999999999998654 556677777764
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.33 E-value=0.0016 Score=61.44 Aligned_cols=122 Identities=14% Similarity=0.148 Sum_probs=78.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.||+.++++.|+ +++++.++|+-....+..+.+..|+...-.
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~----------------------------------- 125 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRMA----------------------------------- 125 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGEE-----------------------------------
T ss_pred ccccchhhhhhhhc-cccccccccccccccccccccccccccccc-----------------------------------
Confidence 36699999999997 479999999999999999998888743110
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
.++.+... -...-.|+--..+++.+.- ....+++|||+
T Consensus 126 -------------------~i~~~~~~----------------------~~~KP~p~~~~~~~~~~~~-~~~~~l~VgDs 163 (207)
T d2hdoa1 126 -------------------VTISADDT----------------------PKRKPDPLPLLTALEKVNV-APQNALFIGDS 163 (207)
T ss_dssp -------------------EEECGGGS----------------------SCCTTSSHHHHHHHHHTTC-CGGGEEEEESS
T ss_pred -------------------cccccccc----------------------ccchhhhhhhcccccceee-eccceeEecCC
Confidence 01111100 0011122222333433322 33679999999
Q ss_pred ccChhhhhhcceeEE-e-ccCCcccccccCCeeecchhhHHH
Q 003824 464 ANDVGMLQEADIGVG-I-SGVEGMQAVMSSDIAIAQFRFLER 503 (793)
Q Consensus 464 ~ND~~ml~~AdvGI~-i-~g~~~~~a~~~aD~~i~~f~~l~~ 503 (793)
.+|+.+-+.|++... + .|.........+|+++.++..|..
T Consensus 164 ~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~ 205 (207)
T d2hdoa1 164 VSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILE 205 (207)
T ss_dssp HHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGG
T ss_pred HHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHHh
Confidence 999999999998763 2 233333345678888877666543
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.20 E-value=0.0086 Score=57.13 Aligned_cols=124 Identities=14% Similarity=0.116 Sum_probs=78.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccccCceEEEEccCCCcccccchhhhHHHHHHHHHHHHHHH
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMRQVIISSETPESKTLEKSEDKSAAAAALKASVLHQ 383 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (793)
++.||+.++++.|+ +|++++++|+-.......+.+.+|+...-..
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~---------------------------------- 144 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDS---------------------------------- 144 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSE----------------------------------
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccc----------------------------------
Confidence 46799999999997 5899999999888888888888887432111
Q ss_pred HhhhhhccccccCCCCCeEEEEeCchhhHhhhhhHHHHHHHHHhcCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCC
Q 003824 384 LIRGKELLDSSNESLGPLALIIDGKSLTYALEDDVKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDG 463 (793)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~~~~~~~~~~~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG 463 (793)
++.+... -.++-.|+-=..+++.+.- ....+++|||.
T Consensus 145 --------------------i~~s~~~----------------------~~~KP~~~~~~~~~~~l~~-~p~~~l~vgD~ 181 (230)
T d1x42a1 145 --------------------ITTSEEA----------------------GFFKPHPRIFELALKKAGV-KGEEAVYVGDN 181 (230)
T ss_dssp --------------------EEEHHHH----------------------TBCTTSHHHHHHHHHHHTC-CGGGEEEEESC
T ss_pred --------------------ccccccc----------------------cccchhhHHHHHHHhhhcc-cccccceeecC
Confidence 1110000 0011111111122333322 34679999997
Q ss_pred -ccChhhhhhcceeE-Eec-cCCcccccccCCeeecchhhHHHHH
Q 003824 464 -ANDVGMLQEADIGV-GIS-GVEGMQAVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 464 -~ND~~ml~~AdvGI-~i~-g~~~~~a~~~aD~~i~~f~~l~~ll 505 (793)
.+|+.+=+.|++.. .+. +.........+|+++.+++.|..+|
T Consensus 182 ~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l 226 (230)
T d1x42a1 182 PVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIV 226 (230)
T ss_dssp TTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHH
T ss_pred cHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHH
Confidence 58999988888754 342 2222334567899999998887763
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.14 E-value=0.0046 Score=57.08 Aligned_cols=52 Identities=19% Similarity=0.247 Sum_probs=38.1
Q ss_pred CCCeEEEEcCCccChhhhhhccee--EEec-cCCc-ccccccCCeeecchhhHHHH
Q 003824 453 TSSTTLAIGDGANDVGMLQEADIG--VGIS-GVEG-MQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 453 ~~~~vlaiGDG~ND~~ml~~AdvG--I~i~-g~~~-~~a~~~aD~~i~~f~~l~~l 504 (793)
..+.++||||..+|+.|=++|+++ +.+. |... ......||+++.++..+.++
T Consensus 124 ~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 124 DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred ccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 346799999999999999999985 3443 3211 12345699999998888776
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=95.90 E-value=0.0019 Score=57.32 Aligned_cols=30 Identities=23% Similarity=0.263 Sum_probs=27.8
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCch
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKM 331 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~ 331 (793)
+|++.+++.+.++.|+++|+++.++||++.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRES 63 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcH
Confidence 578899999999999999999999999874
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.71 E-value=0.014 Score=52.45 Aligned_cols=39 Identities=18% Similarity=0.205 Sum_probs=29.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCch-hhHHHHHHHcC
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKM-ETAINIGFACS 342 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~-~ta~~ia~~~g 342 (793)
++.|++.++++.|++.|+++.++|+-+. ..+...-+..+
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~ 85 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFD 85 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccc
Confidence 5789999999999999999999997544 33343333333
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.69 E-value=0.055 Score=52.13 Aligned_cols=36 Identities=6% Similarity=0.158 Sum_probs=31.3
Q ss_pred CCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHc
Q 003824 306 QNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFAC 341 (793)
Q Consensus 306 r~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~ 341 (793)
=+++.++|+.|+++|++++++|+....+...++..+
T Consensus 20 i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 20 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 378899999999999999999998888888777654
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.69 E-value=0.019 Score=55.10 Aligned_cols=40 Identities=23% Similarity=0.306 Sum_probs=35.0
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccc
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 345 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~ 345 (793)
+-|++.++++.|++ |++++++|+..........+.+|+..
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~ 149 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQS 149 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccc
Confidence 56899999999985 89999999999888888888888754
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=95.61 E-value=0.0088 Score=57.31 Aligned_cols=42 Identities=14% Similarity=0.164 Sum_probs=37.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 303 DKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 303 D~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
-.+.||+.++++.|++.|+++.++|+............+|+.
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~ 167 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG 167 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc
Confidence 356899999999999999999999999998888888888763
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.20 E-value=0.0098 Score=54.79 Aligned_cols=40 Identities=15% Similarity=0.284 Sum_probs=32.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCcc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLL 344 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~ 344 (793)
++.+|+++.++.|++.|+++.++|+-+... ..+....++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhccc
Confidence 467999999999999999999999976544 4566677754
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=95.16 E-value=0.031 Score=52.43 Aligned_cols=26 Identities=27% Similarity=0.330 Sum_probs=23.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCC
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGD 329 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD 329 (793)
++-||+.++|+.|+++|+++.++|..
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ 73 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQ 73 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred EecccHHHHHHHHHhhCCeEEEeccc
Confidence 36799999999999999999999964
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=95.06 E-value=0.16 Score=48.55 Aligned_cols=69 Identities=16% Similarity=0.136 Sum_probs=41.6
Q ss_pred eEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCc-cChhhhhhcce-eEEe-ccC----CcccccccCCeeecchhhH
Q 003824 432 VICCRSSPKQKALVTRLVKTKTSSTTLAIGDGA-NDVGMLQEADI-GVGI-SGV----EGMQAVMSSDIAIAQFRFL 501 (793)
Q Consensus 432 vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~-ND~~ml~~Adv-GI~i-~g~----~~~~a~~~aD~~i~~f~~l 501 (793)
+...+-+|+-=..+.+.+.- ....++||||+. +|+.|-++|++ +|.+ +|. +-..+...+|+++.++..|
T Consensus 172 ~~~~KP~p~~~~~a~~~lgi-~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL 247 (250)
T d2c4na1 172 FYVGKPSPWIIRAALNKMQA-HSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp EECSTTSTHHHHHHHHHHTC-CGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred hhcccchhhhHhhhhhhhcC-CchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHh
Confidence 34444555533344444432 446799999997 59999999997 4544 221 1111223469999886654
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=94.54 E-value=0.054 Score=50.55 Aligned_cols=42 Identities=19% Similarity=0.268 Sum_probs=36.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 345 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~ 345 (793)
.+.+++.++++.+++.|+++.++|+-....+.......++..
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~ 134 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD 134 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccc
Confidence 456899999999999999999999998888888777776643
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=94.46 E-value=0.27 Score=47.16 Aligned_cols=61 Identities=16% Similarity=0.247 Sum_probs=40.9
Q ss_pred HHHHHHHHhcCCCeEEEEcCCc-cChhhhhhcce-eEEe-ccCCc----ccccccCCeeecchhhHHHH
Q 003824 443 ALVTRLVKTKTSSTTLAIGDGA-NDVGMLQEADI-GVGI-SGVEG----MQAVMSSDIAIAQFRFLERL 504 (793)
Q Consensus 443 ~~iv~~lk~~~~~~vlaiGDG~-ND~~ml~~Adv-GI~i-~g~~~----~~a~~~aD~~i~~f~~l~~l 504 (793)
..+.+.+.- ....++||||.. +|+.+-++|++ +|.+ +|... ..+...+|+++.+...|.++
T Consensus 192 ~~a~~~l~~-~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 192 DVISEKFGV-PKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp HHHHHHHTC-CGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred HHHHhhhcc-CchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 344444432 457899999996 69999999997 5655 22111 11223469999998887776
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=94.09 E-value=0.25 Score=47.26 Aligned_cols=72 Identities=13% Similarity=0.153 Sum_probs=47.1
Q ss_pred cCCeeEEEcCChhhHHHHHHHHHhcCCCeEEEEcCCcc-Chhhhhhcce-eEEec-cC---Cc-ccccccCCeeecchhh
Q 003824 428 GCASVICCRSSPKQKALVTRLVKTKTSSTTLAIGDGAN-DVGMLQEADI-GVGIS-GV---EG-MQAVMSSDIAIAQFRF 500 (793)
Q Consensus 428 ~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~N-D~~ml~~Adv-GI~i~-g~---~~-~~a~~~aD~~i~~f~~ 500 (793)
......+..-+|.--..+.+.+.- ....++||||..+ |+.+=++|++ +|.+. |. +. .......|+++.++..
T Consensus 172 ~~~~~~~gKP~p~~~~~al~~l~i-~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e 250 (253)
T d1wvia_ 172 RVKPIIIGKPEAVIMNKALDRLGV-KRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAE 250 (253)
T ss_dssp CCCCEECSTTSHHHHHHHHHHHTS-CGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGG
T ss_pred cceeEEeccCCcccceehhhhccc-cccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHH
Confidence 344444556667666666666654 5578999999976 9999999999 77652 21 11 1122234999887654
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=93.55 E-value=0.032 Score=52.37 Aligned_cols=42 Identities=14% Similarity=0.108 Sum_probs=34.0
Q ss_pred ecccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccc
Q 003824 302 EDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 345 (793)
Q Consensus 302 eD~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~ 345 (793)
..++-||+.+.++.|++.|+++.++|+... +..+....|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 456789999999999999999999999754 556666677643
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=92.75 E-value=0.034 Score=51.58 Aligned_cols=41 Identities=12% Similarity=0.137 Sum_probs=32.7
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCch----hhHHHHHHHcCccc
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKM----ETAINIGFACSLLR 345 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~----~ta~~ia~~~gi~~ 345 (793)
+.+++.+.++.+++.|++|+.+||+.. .|+.++-+.+|+-.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~ 131 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA 131 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCc
Confidence 457999999999999999999999864 45566666677643
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=92.07 E-value=0.095 Score=48.93 Aligned_cols=53 Identities=11% Similarity=0.280 Sum_probs=38.9
Q ss_pred CCCeEEEEcCCccChhhhhhccee-EEeccCCccc-------ccccCCeeecchhhHHHHH
Q 003824 453 TSSTTLAIGDGANDVGMLQEADIG-VGISGVEGMQ-------AVMSSDIAIAQFRFLERLL 505 (793)
Q Consensus 453 ~~~~vlaiGDG~ND~~ml~~AdvG-I~i~g~~~~~-------a~~~aD~~i~~f~~l~~ll 505 (793)
..+.+++|||+.+|+.+=+.|++- |++.+..... ....+|+++.+++.|..+|
T Consensus 157 ~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 157 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred CCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 447899999999999999999974 5665432211 1123899999999887764
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=91.38 E-value=0.0021 Score=69.15 Aligned_cols=40 Identities=20% Similarity=0.074 Sum_probs=36.5
Q ss_pred CCCCCCceeccCCchhhccCceEEEecCC--cccccceeEEE
Q 003824 4 EETDKPARARTSNLNEELGQVDTILSDKT--GTLTCNSMEFI 43 (793)
Q Consensus 4 ~~~~~~~~~r~~~~~E~Lg~v~~i~sDKT--GTLT~n~m~~~ 43 (793)
++.+++++||+++++|+||+..++|+||| +|||.|.+.+.
T Consensus 210 rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v~ 251 (472)
T d1wpga4 210 RMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVV 251 (472)
T ss_dssp HHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHHH
Confidence 46789999999999999999999999998 99999987663
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=89.15 E-value=0.14 Score=45.51 Aligned_cols=26 Identities=35% Similarity=0.454 Sum_probs=23.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCC
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGD 329 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD 329 (793)
++-|++.++++.|++.|++++++|..
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 45789999999999999999999975
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=89.09 E-value=2.3 Score=39.32 Aligned_cols=60 Identities=22% Similarity=0.298 Sum_probs=42.9
Q ss_pred hhhHHHHHHHHHhcCC-CeEEEEcCCccChhhhhhcc----eeEEeccCCcccccccCCeeecchhh
Q 003824 439 PKQKALVTRLVKTKTS-STTLAIGDGANDVGMLQEAD----IGVGISGVEGMQAVMSSDIAIAQFRF 500 (793)
Q Consensus 439 P~qK~~iv~~lk~~~~-~~vlaiGDG~ND~~ml~~Ad----vGI~i~g~~~~~a~~~aD~~i~~f~~ 500 (793)
...|+.+++..-+..+ ...+.+||+..|+.||+.|. ++|+..|++- |...||+++..-+.
T Consensus 183 gg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Y--al~eA~VaiiS~~~ 247 (308)
T d1y8aa1 183 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEY--ALKHADVVIISPTA 247 (308)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHH--HHTTCSEEEECSST
T ss_pred CchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccc--cccccceEEeccch
Confidence 3667777765544222 44588999999999999874 4455567766 88999999887443
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=88.48 E-value=0.22 Score=46.15 Aligned_cols=26 Identities=12% Similarity=0.244 Sum_probs=23.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCC
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGD 329 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD 329 (793)
++.+++.++++.|+++|+++.++|+-
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~ 122 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNN 122 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCccHHHHHHHHHhcCCceEEeecc
Confidence 36789999999999999999999963
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=87.43 E-value=1.1 Score=41.64 Aligned_cols=40 Identities=15% Similarity=0.192 Sum_probs=32.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHcCccc
Q 003824 304 KLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLR 345 (793)
Q Consensus 304 ~lr~~v~~~I~~L~~agIkv~mlTGD~~~ta~~ia~~~gi~~ 345 (793)
++-+++.++++.|+ ++++.++|+-+...+...-...|+..
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~ 132 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTD 132 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccc
Confidence 56789999999885 78999999998888887777777643
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=85.94 E-value=0.33 Score=40.07 Aligned_cols=77 Identities=22% Similarity=0.328 Sum_probs=48.6
Q ss_pred ecCCccHHHHHHHHHHcCCEEEeecCceeEEEecCCCCCccceeEeEEeEeeCCCCCCceEEEEEEcCCCcEEEEEecCc
Q 003824 136 EAESPDEAAFVIAARELGFEFYERTQTSISVHELDPVTGTKVERSYSLLNVLEFSSSRKRMSVIVRSEEGTLLLLSKGAD 215 (793)
Q Consensus 136 ~~~sp~E~Alv~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~ 215 (793)
.+.||...|+++++++.|..+..- ......+|++++. ..+++ |.+
T Consensus 25 ~S~HPlA~AIv~~a~~~~~~~~~~-------~~~~~~~G~Gi~g-------------------------~~v~v---G~~ 69 (113)
T d2b8ea2 25 RSEHPIAEAIVKKALEHGIELGEP-------EKVEVIAGEGVVA-------------------------DGILV---GNK 69 (113)
T ss_dssp TCCSHHHHHHHHHHHTTTCCCCCC-------SCEEEETTTEEEE-------------------------TTEEE---ECH
T ss_pred cCCCchHHHHHHHHHHhcCCCCcc-------ccceeeccceEEe-------------------------EEEEE---CcH
Confidence 367999999999999988654321 1111122332211 12222 777
Q ss_pred hHhHHHHhhcchhhHHHHHHHHHHHHhccceEEEEE
Q 003824 216 SVMFERLAENGREFEEQTKEHINEYADAGLRTLILA 251 (793)
Q Consensus 216 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a 251 (793)
..+-+. +-...+.+.+.++.+..+|..++.+|
T Consensus 70 ~~~~~~----~~~~~~~~~~~~~~~~~~G~T~v~va 101 (113)
T d2b8ea2 70 RLMEDF----GVAVSNEVELALEKLEREAKTAVIVA 101 (113)
T ss_dssp HHHHHT----TCCCCHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHhc----CCCCCHHHHHHHHHHHhCCCeEEEEE
Confidence 665432 22345677888999999999999999
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.58 E-value=0.7 Score=42.18 Aligned_cols=28 Identities=14% Similarity=0.202 Sum_probs=24.6
Q ss_pred cCCChHHHHHHHHHcCCeEEEEeCCchh
Q 003824 305 LQNGVPECIDKLAQAGIKLWVLTGDKME 332 (793)
Q Consensus 305 lr~~v~~~I~~L~~agIkv~mlTGD~~~ 332 (793)
+.+++.+.++.|++.|++++++|+....
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~ 127 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLD 127 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred CCccHHHHHHHHHhccCccccccccchh
Confidence 6789999999999999999999976443
|