Citrus Sinensis ID: 003860
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 791 | 2.2.26 [Sep-21-2011] | |||||||
| Q11011 | 920 | Puromycin-sensitive amino | yes | no | 0.973 | 0.836 | 0.457 | 0.0 | |
| P55786 | 919 | Puromycin-sensitive amino | yes | no | 0.973 | 0.837 | 0.457 | 0.0 | |
| P37898 | 856 | Alanine/arginine aminopep | yes | no | 0.938 | 0.866 | 0.366 | 1e-135 | |
| Q9USX1 | 882 | Aminopeptidase 1 OS=Schiz | yes | no | 0.953 | 0.854 | 0.364 | 1e-135 | |
| Q59KZ1 | 924 | Aminopeptidase 2 OS=Candi | N/A | no | 0.950 | 0.813 | 0.358 | 1e-134 | |
| P32454 | 952 | Aminopeptidase 2, mitocho | no | no | 0.946 | 0.786 | 0.368 | 1e-134 | |
| Q95334 | 942 | Glutamyl aminopeptidase O | no | no | 0.958 | 0.804 | 0.366 | 1e-132 | |
| Q07075 | 957 | Glutamyl aminopeptidase O | no | no | 0.960 | 0.794 | 0.359 | 1e-131 | |
| Q32LQ0 | 956 | Glutamyl aminopeptidase O | no | no | 0.962 | 0.796 | 0.364 | 1e-131 | |
| P50123 | 945 | Glutamyl aminopeptidase O | no | no | 0.958 | 0.802 | 0.352 | 1e-130 |
| >sp|Q11011|PSA_MOUSE Puromycin-sensitive aminopeptidase OS=Mus musculus GN=Npepps PE=1 SV=2 | Back alignment and function desciption |
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Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/807 (45%), Positives = 486/807 (60%), Gaps = 37/807 (4%)
Query: 1 MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60
M E + RLP P Y + L PDL F G + V T IV+N AD+ I
Sbjct: 46 MPEKRPFERLPAEVSPINYSLCLKPDLLDFTFEGKLEAAAQVRQATNQIVMNCADIDIIT 105
Query: 61 RSVSFTNKVSSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR 120
S + + + T DE + L F TL TG G L I F G LNDKMKGFYR
Sbjct: 106 ASYA---PEGDEEIHATGFNYQNEDEKVTLSFPSTLQTGTGTLKIDFVGELNDKMKGFYR 162
Query: 121 SSYELN-GEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDE 179
S Y GE + AVTQFE DARR FPCWDEPA KATF I+L VP + VALSNM VID
Sbjct: 163 SRYTTPAGEVRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVIDR 222
Query: 180 KV---DGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFA 236
K D N+ V + +P+MSTYLVA V+G +D+VE + DG+ VRVY VGKA QGKFA
Sbjct: 223 KPYPDDENLVEVKFARTPVMSTYLVAFVVGEYDFVETRSKDGVCVRVYTPVGKAEQGKFA 282
Query: 237 LNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAA 296
L VA KTL YK+YF VPY LPK+D+IAI DFAAGAMEN+GLVTYRETALL D ++S ++
Sbjct: 283 LEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCSS 342
Query: 297 NKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLD 356
++Q VA VV HELAHQWFGNLVTMEWWTHLWLNEGFA+W+ YL D FPE+ IWTQF+
Sbjct: 343 SRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFVS 402
Query: 357 -ECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSL 415
+ T LD L SHPIEV V H E+DEIFDAISY KGASVIRML +Y+G + F++ +
Sbjct: 403 ADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKGM 462
Query: 416 ASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEK----LEL 471
Y+ K+ NA TEDLW +LE SG+P+ +MN+WTKQ G+P+I V+ ++ + L+L
Sbjct: 463 NMYLTKFQQKNAATEDLWESLESASGKPIAAVMNTWTKQMGFPLIYVEAEQVEDDRVLKL 522
Query: 472 EQSQFLSSGSPGD---GQWIVPITLCCG-SYDVCKNFLLYNKSDSFDIKELLGCSISKEG 527
Q +F +SG G QW+VPIT+ + K +L +K + + K
Sbjct: 523 SQKKFCASGPYGGEDCPQWMVPITISTSEDPNQAKLKILMDKPEM--------SVVLKNV 574
Query: 528 DNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTL 587
W+KLN+ GFYR +Y + L I L DR G+ +D F+L A +
Sbjct: 575 KPDQWVKLNLGTVGFYRTQYSSAMLESLLPGIRDLSLPPVDRLGLQNDLFSLARAGIIST 634
Query: 588 TSLLTLMASYSEETEYTVLSNLITISYKIGRIAA-DARPELLDYLKQFFISLFQNSAEKL 646
+L +M ++ E YTV S+L S +G ++ + + + +++F +F E+L
Sbjct: 635 VEVLKVMEAFVNEPNYTVWSDL---SCNLGILSTLLSHTDFYEEIQEFVKDVFSPIGERL 691
Query: 647 GWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAY 706
GWD KPGE HLDALLRG + L GHK TL EA +RF + + +L D+R Y
Sbjct: 692 GWDPKPGEGHLDALLRGLVLGKLGKAGHKATLEEARRRFKEHVEGKQ--ILSADLRSPVY 749
Query: 707 VAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVR 766
+ V++ D + + +L+++++ D+ +EK RI L + ++ +VL F LS EVR
Sbjct: 750 LTVLKH---GDGATLDIMLKLHKQADMQEEKNRIERVLGATLSPELIQKVLTFALSEEVR 806
Query: 767 SQDAVY---GLA-VSIEGRETAWKWLK 789
QD V G+A S GR+ AWK++K
Sbjct: 807 PQDTVSVIGGVAGGSKHGRKAAWKFIK 833
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Aminopeptidase with broad substrate specificity for several peptides. Involved in proteolytic events essential for cell growth and viability. May act as regulator of neuropeptide activity. Plays a role in the antigen-processing pathway for MHC class I molecules. Involved in the N-terminal trimming of cytotoxic T-cell epitope precursors. Digests the poly-Q peptides found in many cellular proteins. Mus musculus (taxid: 10090) EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 4 |
| >sp|P55786|PSA_HUMAN Puromycin-sensitive aminopeptidase OS=Homo sapiens GN=NPEPPS PE=1 SV=2 | Back alignment and function description |
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| >sp|P37898|AAP1_YEAST Alanine/arginine aminopeptidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AAP1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9USX1|APE1_SCHPO Aminopeptidase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ape1 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q59KZ1|APE2_CANAL Aminopeptidase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=APE2 PE=1 SV=2 | Back alignment and function description |
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| >sp|P32454|APE2_YEAST Aminopeptidase 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APE2 PE=1 SV=4 | Back alignment and function description |
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| >sp|Q95334|AMPE_PIG Glutamyl aminopeptidase OS=Sus scrofa GN=ENPEP PE=1 SV=1 | Back alignment and function description |
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| >sp|Q07075|AMPE_HUMAN Glutamyl aminopeptidase OS=Homo sapiens GN=ENPEP PE=1 SV=3 | Back alignment and function description |
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| >sp|Q32LQ0|AMPE_BOVIN Glutamyl aminopeptidase OS=Bos taurus GN=ENPEP PE=2 SV=1 | Back alignment and function description |
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| >sp|P50123|AMPE_RAT Glutamyl aminopeptidase OS=Rattus norvegicus GN=Enpep PE=1 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 791 | ||||||
| 343887278 | 911 | aminopeptidase [Citrus unshiu] | 0.943 | 0.818 | 0.921 | 0.0 | |
| 225429582 | 880 | PREDICTED: puromycin-sensitive aminopept | 0.997 | 0.896 | 0.824 | 0.0 | |
| 147772895 | 880 | hypothetical protein VITISV_012143 [Viti | 0.997 | 0.896 | 0.822 | 0.0 | |
| 255550101 | 870 | puromycin-sensitive aminopeptidase, puta | 0.989 | 0.9 | 0.803 | 0.0 | |
| 356507019 | 873 | PREDICTED: puromycin-sensitive aminopept | 0.993 | 0.900 | 0.793 | 0.0 | |
| 357465783 | 876 | Puromycin-sensitive aminopeptidase [Medi | 0.997 | 0.900 | 0.778 | 0.0 | |
| 356514669 | 873 | PREDICTED: puromycin-sensitive aminopept | 0.993 | 0.900 | 0.783 | 0.0 | |
| 297798638 | 879 | hypothetical protein ARALYDRAFT_491378 [ | 0.997 | 0.897 | 0.779 | 0.0 | |
| 22329112 | 879 | aminopeptidase M1 [Arabidopsis thaliana] | 0.997 | 0.897 | 0.780 | 0.0 | |
| 449486688 | 886 | PREDICTED: LOW QUALITY PROTEIN: puromyci | 0.997 | 0.890 | 0.770 | 0.0 |
| >gi|343887278|dbj|BAK61824.1| aminopeptidase [Citrus unshiu] | Back alignment and taxonomy information |
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Score = 1481 bits (3833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 741/804 (92%), Positives = 742/804 (92%), Gaps = 58/804 (7%)
Query: 1 MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60
MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN
Sbjct: 1 MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60
Query: 61 RSVSFTNKVSSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR 120
RSVSFTNK SSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR
Sbjct: 61 RSVSFTNKASSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR 120
Query: 121 SSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK 180
SSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK
Sbjct: 121 SSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK 180
Query: 181 VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDG----------IKVRVYCQVGKA 230
VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDG IKVRVYCQVGKA
Sbjct: 181 VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGTVTISIDSHGIKVRVYCQVGKA 240
Query: 231 NQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDD 290
NQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDD
Sbjct: 241 NQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDD 300
Query: 291 QHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI 350
QHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI
Sbjct: 301 QHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI 360
Query: 351 WTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAEC 410
WTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAEC
Sbjct: 361 WTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAEC 420
Query: 411 FQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLE 470
FQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKV+EEKLE
Sbjct: 421 FQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVREEKLE 480
Query: 471 LEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNG 530
LEQ LGCSISKEGDNG
Sbjct: 481 LEQEL-------------------------------------------LGCSISKEGDNG 497
Query: 531 GWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSL 590
GWIKLNVNQTGFYRVKYDKDLAARLGYAIE KQLSETDRFGILDDHFALCMARQQTLTSL
Sbjct: 498 GWIKLNVNQTGFYRVKYDKDLAARLGYAIEKKQLSETDRFGILDDHFALCMARQQTLTSL 557
Query: 591 LTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAE-----K 645
LTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAE K
Sbjct: 558 LTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAELFICRK 617
Query: 646 LGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAA 705
LGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAA
Sbjct: 618 LGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAA 677
Query: 706 YVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEV 765
YVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEV
Sbjct: 678 YVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEV 737
Query: 766 RSQDAVYGLAVSIEGRETAWKWLK 789
RSQDAVYGLAVSIEGRETAWKWLK
Sbjct: 738 RSQDAVYGLAVSIEGRETAWKWLK 761
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Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429582|ref|XP_002280239.1| PREDICTED: puromycin-sensitive aminopeptidase [Vitis vinifera] gi|296081675|emb|CBI20680.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147772895|emb|CAN73668.1| hypothetical protein VITISV_012143 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255550101|ref|XP_002516101.1| puromycin-sensitive aminopeptidase, putative [Ricinus communis] gi|223544587|gb|EEF46103.1| puromycin-sensitive aminopeptidase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356507019|ref|XP_003522269.1| PREDICTED: puromycin-sensitive aminopeptidase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357465783|ref|XP_003603176.1| Puromycin-sensitive aminopeptidase [Medicago truncatula] gi|355492224|gb|AES73427.1| Puromycin-sensitive aminopeptidase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356514669|ref|XP_003526026.1| PREDICTED: puromycin-sensitive aminopeptidase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297798638|ref|XP_002867203.1| hypothetical protein ARALYDRAFT_491378 [Arabidopsis lyrata subsp. lyrata] gi|297313039|gb|EFH43462.1| hypothetical protein ARALYDRAFT_491378 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|22329112|ref|NP_195035.2| aminopeptidase M1 [Arabidopsis thaliana] gi|17473511|gb|AAL38379.1| AT4g33090/F4I10_20 [Arabidopsis thaliana] gi|24209879|gb|AAN41401.1| aminopeptidase M [Arabidopsis thaliana] gi|29028734|gb|AAO64746.1| At4g33090/F4I10_20 [Arabidopsis thaliana] gi|110742477|dbj|BAE99157.1| aminopeptidase like protein [Arabidopsis thaliana] gi|332660772|gb|AEE86172.1| aminopeptidase M1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|449486688|ref|XP_004157369.1| PREDICTED: LOW QUALITY PROTEIN: puromycin-sensitive aminopeptidase-like [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 791 | ||||||
| TAIR|locus:2125904 | 879 | APM1 "aminopeptidase M1" [Arab | 0.997 | 0.897 | 0.763 | 0.0 | |
| ZFIN|ZDB-GENE-060524-3 | 925 | npepps "aminopeptidase puromyc | 0.973 | 0.832 | 0.462 | 1.7e-176 | |
| FB|FBgn0261243 | 1075 | Psa "Puromycin sensitive amino | 0.962 | 0.707 | 0.449 | 1.1e-172 | |
| MGI|MGI:1101358 | 920 | Npepps "aminopeptidase puromyc | 0.972 | 0.835 | 0.451 | 7.4e-169 | |
| UNIPROTKB|E1BP91 | 921 | NPEPPS "Uncharacterized protei | 0.973 | 0.836 | 0.449 | 1.2e-168 | |
| UNIPROTKB|E9PLK3 | 915 | NPEPPS "Puromycin-sensitive am | 0.973 | 0.841 | 0.451 | 1.2e-168 | |
| UNIPROTKB|P55786 | 919 | NPEPPS "Puromycin-sensitive am | 0.973 | 0.837 | 0.451 | 1.2e-168 | |
| UNIPROTKB|F1M9V7 | 920 | Npepps "Protein Npepps" [Rattu | 0.972 | 0.835 | 0.451 | 1.2e-168 | |
| UNIPROTKB|F1RWJ6 | 923 | LOC414413 "Uncharacterized pro | 0.973 | 0.834 | 0.447 | 4.7e-167 | |
| UNIPROTKB|F1P456 | 837 | NPEPPS "Uncharacterized protei | 0.919 | 0.868 | 0.457 | 2.3e-165 |
| TAIR|locus:2125904 APM1 "aminopeptidase M1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 3176 (1123.1 bits), Expect = 0., P = 0.
Identities = 606/794 (76%), Positives = 682/794 (85%)
Query: 1 MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60
M++FKG+PRLPKFAVPKRYD+RL PDL +C F G+VAID+D+V DT+FIVLNAADL++N+
Sbjct: 1 MDQFKGEPRLPKFAVPKRYDLRLNPDLIACTFTGTVAIDLDIVADTRFIVLNAADLSVND 60
Query: 61 RSVSFTNKVSSKALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYR 120
SVSFT SSKAL KV L E DEILVLEF E LP G+GVL +GF GVLNDKMKGFYR
Sbjct: 61 ASVSFTPPSSSKALAAPKVVLFEEDEILVLEFGEILPHGVGVLKLGFNGVLNDKMKGFYR 120
Query: 121 SSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK 180
S+YE NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITL+VP++LVALSNMP+++EK
Sbjct: 121 STYEHNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLEVPTDLVALSNMPIMEEK 180
Query: 181 VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVA 240
V+GN+K VSYQESPIMSTYLVA+V+GLFDYVEDHTSDGIKVRVYCQVGKA+QGKFAL+V
Sbjct: 181 VNGNLKIVSYQESPIMSTYLVAIVVGLFDYVEDHTSDGIKVRVYCQVGKADQGKFALHVG 240
Query: 241 VKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQR 300
KTL+L+KEYFAVPY LPK+DMIAIPDFAAGAMENYGLVTYRETALLYD+QHSAA+NKQR
Sbjct: 241 AKTLDLFKEYFAVPYPLPKMDMIAIPDFAAGAMENYGLVTYRETALLYDEQHSAASNKQR 300
Query: 301 VATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTE 360
VATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLA DSLFPEWKIWTQFLDE TE
Sbjct: 301 VATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLATDSLFPEWKIWTQFLDESTE 360
Query: 361 GLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIK 420
GLRLDGL ESHPIEVEVNH EIDEIFDAISYRKGASVIRMLQ+YLGAE FQ+SLA+YIK
Sbjct: 361 GLRLDGLEESHPIEVEVNHAAEIDEIFDAISYRKGASVIRMLQSYLGAEVFQKSLAAYIK 420
Query: 421 KYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVIXXXXXXXXXXXXXXXXXXXG 480
+A SNAKTEDLWAALE GSGEPVNKLM+SWTKQKGYPV+ G
Sbjct: 421 NHAYSNAKTEDLWAALEAGSGEPVNKLMSSWTKQKGYPVVSAKIKDGKLELEQSRFLSSG 480
Query: 481 SPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGD--NG--GWIKLN 536
SPG+GQWIVP+TLCCGSY+ KNFLL +KS ++D+KELLGCSI+ D NG WIK+N
Sbjct: 481 SPGEGQWIVPVTLCCGSYEKRKNFLLESKSGAYDLKELLGCSIADGSDKINGTCSWIKIN 540
Query: 537 VNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMAS 596
V+Q GFYRVKYD LAA L A E + L+ DR+GILDD FAL MARQQ+L SLLTL ++
Sbjct: 541 VDQAGFYRVKYDDSLAAGLRNATESQSLTSIDRYGILDDSFALTMARQQSLASLLTLCSA 600
Query: 597 YSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKPGESH 656
Y +E +YTVLSNLI ISYK+ +I ADA EL+ +K FFI +FQ +A KLGWD K GESH
Sbjct: 601 YKKELDYTVLSNLIAISYKVVKIGADANQELMSGIKHFFIGVFQFAAGKLGWDPKQGESH 660
Query: 657 LDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSAS 716
LDA+LRGE+ TALA+ GH ETL EA +RF AFLADR TPLLPPDIR+AAYVAVMQ+ + S
Sbjct: 661 LDAMLRGEVLTALAVFGHDETLKEAVRRFDAFLADRNTPLLPPDIRRAAYVAVMQRANKS 720
Query: 717 DRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLA- 775
D+SGYESLLRVYRETDLSQEKTRIL SLASCPD IV +VLNF+LS EVR+QDA+YGL+
Sbjct: 721 DKSGYESLLRVYRETDLSQEKTRILGSLASCPDPTIVQDVLNFVLSDEVRNQDALYGLSG 780
Query: 776 VSIEGRETAWKWLK 789
VS EGRE AWKWL+
Sbjct: 781 VSWEGREVAWKWLQ 794
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| ZFIN|ZDB-GENE-060524-3 npepps "aminopeptidase puromycin sensitive" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| FB|FBgn0261243 Psa "Puromycin sensitive aminopeptidase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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| MGI|MGI:1101358 Npepps "aminopeptidase puromycin sensitive" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BP91 NPEPPS "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E9PLK3 NPEPPS "Puromycin-sensitive aminopeptidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P55786 NPEPPS "Puromycin-sensitive aminopeptidase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1M9V7 Npepps "Protein Npepps" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1RWJ6 LOC414413 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P456 NPEPPS "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q974N6 | APE2_SULTO | 3, ., 4, ., 1, 1, ., - | 0.3495 | 0.8887 | 0.9001 | yes | no |
| Q9USX1 | APE1_SCHPO | 3, ., 4, ., 1, 1, ., - | 0.3647 | 0.9532 | 0.8548 | yes | no |
| Q11011 | PSA_MOUSE | 3, ., 4, ., 1, 1, ., 1, 4 | 0.4572 | 0.9734 | 0.8369 | yes | no |
| A2RI32 | AMPN_LACLM | 3, ., 4, ., 1, 1, ., 2 | 0.3316 | 0.9380 | 0.8770 | yes | no |
| O93655 | TRF3_THEAC | 3, ., 4, ., 1, 1, ., - | 0.3303 | 0.8546 | 0.8666 | yes | no |
| P95928 | APE2_SULSO | 3, ., 4, ., 1, 1, ., 1 | 0.3346 | 0.8659 | 0.8726 | yes | no |
| P37898 | AAP1_YEAST | 3, ., 4, ., 1, 1, ., - | 0.3669 | 0.9380 | 0.8668 | yes | no |
| Q10730 | AMPN_LACHE | 3, ., 4, ., 1, 1, ., 2 | 0.3278 | 0.9418 | 0.8827 | yes | no |
| Q9CIQ1 | AMPN_LACLA | 3, ., 4, ., 1, 1, ., 2 | 0.3266 | 0.9380 | 0.8770 | yes | no |
| P55786 | PSA_HUMAN | 3, ., 4, ., 1, 1, ., 1, 4 | 0.4572 | 0.9734 | 0.8378 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.3.2 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.4.11 | 0.766 |
| 3rd Layer | 3.3.2.6 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 791 | |||
| cd09601 | 446 | cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N f | 0.0 | |
| pfam01433 | 390 | pfam01433, Peptidase_M1, Peptidase family M1 | 1e-174 | |
| COG0308 | 859 | COG0308, PepN, Aminopeptidase N [Amino acid transp | 1e-146 | |
| cd09602 | 438 | cd09602, M1_APN_3, Peptidase M1 family containing | 1e-95 | |
| TIGR02412 | 831 | TIGR02412, pepN_strep_liv, aminopeptidase N, Strep | 2e-73 | |
| cd09603 | 415 | cd09603, M1_APN_4, Peptidase M1 family Aminopeptid | 1e-70 | |
| cd09595 | 407 | cd09595, M1, Peptidase M1 family contains aminopep | 2e-69 | |
| pfam11838 | 323 | pfam11838, DUF3358, Domain of unknown function (DU | 8e-45 | |
| TIGR02414 | 863 | TIGR02414, pepN_proteo, aminopeptidase N, Escheric | 4e-37 | |
| cd09600 | 861 | cd09600, M1_APN_1, Peptidase M1 family containing | 1e-33 | |
| cd09604 | 435 | cd09604, M1_APN_5, Peptidase M1 family containing | 5e-30 | |
| cd09599 | 442 | cd09599, M1_LTA4H, Peptidase M1 family contains le | 3e-29 | |
| TIGR02411 | 602 | TIGR02411, leuko_A4_hydro, leukotriene A-4 hydrola | 2e-27 | |
| pfam13485 | 128 | pfam13485, Peptidase_MA_2, Peptidase MA superfamil | 7e-20 | |
| cd09839 | 507 | cd09839, M1_TAF2, TATA binding protein (TBP) assoc | 1e-16 | |
| PRK14015 | 875 | PRK14015, pepN, aminopeptidase N; Provisional | 2e-16 | |
| cd09594 | 125 | cd09594, GluZincin, Peptidase Gluzincin family (th | 4e-05 |
| >gnl|CDD|189008 cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N family incudes tricorn interacting factor F3, Endoplasmic reticulum aminopeptidase 1 (ERAP1), Aminopeptidase Q (APQ) | Back alignment and domain information |
|---|
Score = 701 bits (1811), Expect = 0.0
Identities = 249/446 (55%), Positives = 309/446 (69%), Gaps = 6/446 (1%)
Query: 18 RYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPT 77
YD+ LTPDL + F GSV I ++V T IVL+A DLTI + +V+ + L
Sbjct: 2 HYDLTLTPDLDNFTFSGSVTITLEVTEPTNEIVLHAKDLTITSATVTVGG-GNVDILVTI 60
Query: 78 KVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVTQ 136
++ L+ TL G L I F G LND ++GFYRSSY + GE + +A TQ
Sbjct: 61 TYSEENEFLVITLDEPLTLAGGNYTLTIEFTGELNDDLRGFYRSSYTDNGGETRYLAATQ 120
Query: 137 FEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKV-DGNMKTVSYQESPI 195
FEP DARR FPC+DEPA KATF IT+ P+ ALSNMPV E+V KT ++ +P
Sbjct: 121 FEPTDARRAFPCFDEPAFKATFTITITHPAGYTALSNMPVESEEVLGDGWKTTEFETTPP 180
Query: 196 MSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPY 255
MSTYLVA V+G FDYVE T +G+ VRVY + GK QG +AL VA K LE +++YF +PY
Sbjct: 181 MSTYLVAFVVGDFDYVEGTTKNGVPVRVYARPGKIEQGDYALEVAPKILEFFEDYFGIPY 240
Query: 256 SLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFG 315
LPKLD++AIPDFAAGAMEN+GL+TYRETALLYD + S+A+NKQRVATVVAHELAHQWFG
Sbjct: 241 PLPKLDLVAIPDFAAGAMENWGLITYRETALLYDPKTSSASNKQRVATVVAHELAHQWFG 300
Query: 316 NLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQF-LDECTEGLRLDGLAESHPIE 374
NLVTM+WW LWLNEGFAT++ YL D L PEW +W QF LD+ L LD LA SHPI
Sbjct: 301 NLVTMKWWDDLWLNEGFATYMEYLGVDHLEPEWNMWDQFVLDDLQSALALDSLASSHPIS 360
Query: 375 VEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWA 434
V V EI EIFDAISY KGASV+RML+++LG E F++ L +Y+KK+A NA T+DLW
Sbjct: 361 VPVETPDEISEIFDAISYSKGASVLRMLEHFLGEEVFRKGLRNYLKKHAYGNATTDDLWE 420
Query: 435 ALEE--GSGEPVNKLMNSWTKQKGYP 458
AL E G+ V ++M++WT Q GYP
Sbjct: 421 ALSEASKLGKDVKEIMDTWTLQPGYP 446
|
This M1 peptidase family includes eukaryotic and bacterial members: aminopeptidase N (APN), aminopeptidase Q (APQ, laeverin), endoplasmic reticulum aminopeptidase 1 (ERAP1) as well as tricorn interacting factor F3. Aminopeptidase N (APN; CD13; Alanyl aminopeptidase; EC 3.4.11.2), a Type II integral membrane protease, consists of a small N-terminal cytoplasmic domain, a single transmembrane domain and a large extracellular ectodomain that contains the active site. It preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is considered a marker of differentiation since it is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. ERAP1 also known as endoplasmic reticulum aminopeptidase associated with antigen processing (ERAAP), adipocyte derived leucine aminopeptidase (A-LAP) or aminopeptidase regulating tumor necrosis factor receptor I (THFRI) shedding (ARTS-1), associates with the closely related ER aminopeptidase ERAP2, for the final trimming of peptides within the ER for presentation by MHC class I molecules. ERAP1 is associated with ankylosing spondylitis (AS), an inflammatory arthritis that predominantly affects the spine. ERAP1 also aids in the shedding of membrane-bound cytokine receptors. The tricorn interacting factor F3, together with factors F1 and F2, degrades the tricorn protease products, producing free amino acids, thus completing the proteasomal degradation pathway. F3 is homologous to F2, but not F1, and shows a strong preference for glutamate in the P1' position. APQ, also known as laeverin, is specifically expressed in human embryo-derived extravillous trophoblasts (EVTs) that invade the uterus during early placentation. It cleaves the N-terminal amino acid of various peptides such as angiotensin III, endokinin C, and kisspeptin-10, all expressed in the placenta in large quantities. APN is a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs are also putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established. Length = 446 |
| >gnl|CDD|216501 pfam01433, Peptidase_M1, Peptidase family M1 | Back alignment and domain information |
|---|
| >gnl|CDD|223385 COG0308, PepN, Aminopeptidase N [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|189009 cd09602, M1_APN_3, Peptidase M1 family containing Aminopeptidase N | Back alignment and domain information |
|---|
| >gnl|CDD|233857 TIGR02412, pepN_strep_liv, aminopeptidase N, Streptomyces lividans type | Back alignment and domain information |
|---|
| >gnl|CDD|189010 cd09603, M1_APN_4, Peptidase M1 family Aminopeptidase N | Back alignment and domain information |
|---|
| >gnl|CDD|189002 cd09595, M1, Peptidase M1 family contains aminopeptidase N and leukotriene A4 hydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|221257 pfam11838, DUF3358, Domain of unknown function (DUF3358) | Back alignment and domain information |
|---|
| >gnl|CDD|233858 TIGR02414, pepN_proteo, aminopeptidase N, Escherichia coli type | Back alignment and domain information |
|---|
| >gnl|CDD|189007 cd09600, M1_APN_1, Peptidase M1 family containing Aminopeptidase N | Back alignment and domain information |
|---|
| >gnl|CDD|189011 cd09604, M1_APN_5, Peptidase M1 family containing bacterial Aminopeptidase N | Back alignment and domain information |
|---|
| >gnl|CDD|189006 cd09599, M1_LTA4H, Peptidase M1 family contains leukotriene A4 hydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|233856 TIGR02411, leuko_A4_hydro, leukotriene A-4 hydrolase/aminopeptidase | Back alignment and domain information |
|---|
| >gnl|CDD|222169 pfam13485, Peptidase_MA_2, Peptidase MA superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|189018 cd09839, M1_TAF2, TATA binding protein (TBP) associated factor 2 | Back alignment and domain information |
|---|
| >gnl|CDD|237585 PRK14015, pepN, aminopeptidase N; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|189001 cd09594, GluZincin, Peptidase Gluzincin family (thermolysin-like proteinases, TLPs) includes peptidases M1, M2, M3, M4, M13, M32 and M36 (fungalysins) | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 791 | |||
| KOG1046 | 882 | consensus Puromycin-sensitive aminopeptidase and r | 100.0 | |
| TIGR02412 | 831 | pepN_strep_liv aminopeptidase N, Streptomyces livi | 100.0 | |
| COG0308 | 859 | PepN Aminopeptidase N [Amino acid transport and me | 100.0 | |
| TIGR02414 | 863 | pepN_proteo aminopeptidase N, Escherichia coli typ | 100.0 | |
| PRK14015 | 875 | pepN aminopeptidase N; Provisional | 100.0 | |
| TIGR02411 | 601 | leuko_A4_hydro leukotriene A-4 hydrolase/aminopept | 100.0 | |
| PF01433 | 390 | Peptidase_M1: Peptidase family M1 This is family M | 100.0 | |
| KOG1047 | 613 | consensus Bifunctional leukotriene A4 hydrolase/am | 100.0 | |
| PF11838 | 324 | ERAP1_C: ERAP1-like C-terminal domain; InterPro: I | 100.0 | |
| KOG1932 | 1180 | consensus TATA binding protein associated factor [ | 100.0 | |
| COG3975 | 558 | Predicted protease with the C-terminal PDZ domain | 99.35 | |
| PF13485 | 128 | Peptidase_MA_2: Peptidase MA superfamily | 99.17 | |
| PF10460 | 366 | Peptidase_M30: Peptidase M30; InterPro: IPR019501 | 97.49 | |
| PF05299 | 122 | Peptidase_M61: M61 glycyl aminopeptidase; InterPro | 97.25 | |
| PF11940 | 367 | DUF3458: Domain of unknown function (DUF3458); Int | 96.89 | |
| PF04450 | 205 | BSP: Peptidase of plants and bacteria; InterPro: I | 96.24 | |
| PF07607 | 128 | DUF1570: Protein of unknown function (DUF1570); In | 95.85 | |
| smart00638 | 574 | LPD_N Lipoprotein N-terminal Domain. | 92.83 | |
| PF10026 | 195 | DUF2268: Predicted Zn-dependent protease (DUF2268) | 92.37 | |
| PRK04860 | 160 | hypothetical protein; Provisional | 89.57 | |
| PF01863 | 205 | DUF45: Protein of unknown function DUF45; InterPro | 86.97 | |
| PF10023 | 337 | DUF2265: Predicted aminopeptidase (DUF2265); Inter | 86.81 | |
| COG4324 | 376 | Predicted aminopeptidase [General function predict | 84.26 | |
| PF01347 | 618 | Vitellogenin_N: Lipoprotein amino terminal region; | 82.95 | |
| smart00731 | 146 | SprT SprT homologues. Predicted to have roles in t | 81.4 |
| >KOG1046 consensus Puromycin-sensitive aminopeptidase and related aminopeptidases [Amino acid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-144 Score=1274.18 Aligned_cols=766 Identities=49% Similarity=0.793 Sum_probs=703.7
Q ss_pred cCCCCcCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEeCCceEeEEEEEeecCCCCCcccCeeEEEec
Q 003860 4 FKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVE 83 (791)
Q Consensus 4 ~~~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~ 83 (791)
+...+|||++++|+||+|.|.+++....|.|++.|.+++.++|+.|+||+.+++|.++.+....................
T Consensus 25 ~~~~~rLP~~v~P~~Y~l~l~~~l~~~~f~G~v~I~l~v~~~t~~i~Lh~~~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (882)
T KOG1046|consen 25 FPNEYRLPTNVVPLHYDLTLKPDLEEFTFTGSVKISLEVSEATRFIVLHAKDLKITSASLVSRPSSGSVQLEVSVEEKEQ 104 (882)
T ss_pred ccccccCCCCCCCceeEEEEecCCcCCcceeEEEEEEEEecccCEEEEEhhhccceeEEEEecCCCCccccccccccccc
Confidence 34678999999999999999999999999999999999999999999999999999999875322111110000011111
Q ss_pred CCeEEEEEeCCCCCCc-eEEEEEEEEeeeCCCCcceEEeeecc-CCeeeeeccccCCCCCCCceeeccCCCCCceEEEEE
Q 003860 84 ADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKIT 161 (791)
Q Consensus 84 ~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~-~g~~~~~~~t~~ep~~ar~~fPc~DeP~~ka~f~i~ 161 (791)
. +.+.+.+++++..| .|+|+|.|.|++++++.|||+++|.+ .+.++++++|||||++||++|||||||++||+|.|+
T Consensus 105 ~-~~l~~~~~~~l~~~~~y~L~i~f~g~l~~~~~G~y~s~y~~~~~~~~~~~~Tqfept~AR~~FPCfDeP~~KAtF~It 183 (882)
T KOG1046|consen 105 E-ETLVFPLNETLLAGSSYTLTIEFTGKLNDSSEGFYRSSYTDSEGSEKSIAATQFEPTDARRAFPCFDEPAFKATFTIT 183 (882)
T ss_pred c-eEEEEEcccccccCCeEEEEEEEeEeecCCcceeeeecccCCCCceEEEEEeccCccchhhcCCCCCcccccCceEEE
Confidence 1 68889999999999 79999999999999999999999987 566689999999999999999999999999999999
Q ss_pred EEeCCCCeEeecCcccce-eecCCeEEEEEEcCCCCcceEEEEEEeeeeEeeccccCCeEEEEEEeCCchhhHHHHHHHH
Q 003860 162 LDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVA 240 (791)
Q Consensus 162 i~~p~~~~~~sn~~~~~~-~~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~~~~v~v~~~~~~~~~~~~~l~~~ 240 (791)
|.||++++|+|||++..+ ..++++++++|++||+||||++||+||+|++.+..+.+|+++|+|++|+...+.+++++.+
T Consensus 184 l~hp~~~~aLSNm~v~~~~~~~~~~~~~~F~~Tp~MstYLvAf~V~~f~~~e~~~~~~v~vrv~a~p~~~~~~~~al~~~ 263 (882)
T KOG1046|consen 184 LVHPKGYTALSNMPVIKEEPVDDGWKTTTFEKTPKMSTYLVAFAVGDFVYVETITKSGVPVRVYARPEKINQGQFALEVA 263 (882)
T ss_pred EEecCCceEeecCcccccccccCCeeEEEEEecCCCchhhheeeeeccccceeecCCCceEEEEeChHHhhHHHHHHHHH
Confidence 999999999999999876 4455599999999999999999999999999998888899999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCchhHHHHHHHHHHHHHHHHHHhcCccCc
Q 003860 241 VKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTM 320 (791)
Q Consensus 241 ~~~l~~~e~~fg~~yP~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn~Vt~ 320 (791)
.++|++|+++||+|||+||+|+|++|+|..|||||||||+|+|..+|+++..++..++++++.+||||+|||||||+|||
T Consensus 264 ~~~L~~~e~~f~i~yPLpK~D~iavPdf~~GAMENwGLvtyre~~lL~~~~~ss~~~k~~va~vIaHElAHQWFGNLVTm 343 (882)
T KOG1046|consen 264 TKVLEFYEDYFGIPYPLPKLDLVAVPDFSAGAMENWGLVTYRETALLYDPQTSSSSNKQRVAEVIAHELAHQWFGNLVTM 343 (882)
T ss_pred HHHHHHHHHHhCCCCCCccccEEecCCccccchhcCcceeeeehhhccCCCcCcHHHHHHHHHHHHHHHHHHHhcCcccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhHHhhhHHHHHHHHHhhhhCCcchhHHHHHHHHH-hhhhccccCCCCceeeecCCchhhhcccccccccchhHHH
Q 003860 321 EWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 399 (791)
Q Consensus 321 ~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl 399 (791)
+||+|+|||||||+|+++++++..+|+|..+++++.+.. .++..|++.++||+..++.++.++.+.||.++|.||++|+
T Consensus 344 ~wW~dLWLnEGfAt~~~~~~v~~~~p~~~~~~~~~~~~l~~~l~~D~l~~shpi~~~v~~~~ei~e~fd~i~Y~KGasvl 423 (882)
T KOG1046|consen 344 KWWNDLWLNEGFATYVEYLAVDHLFPEWDIWEQFLLENLERVLSLDALASSHPISVPVESPSEIDEIFDEISYQKGASVL 423 (882)
T ss_pred hhhhhhhhcccHHHHHHHHhhccCCcchhhHHHHHHHHHHHHhhhhcccccCCeeeecCCcchhhhhhhhhhhhHHHHHH
Confidence 999999999999999999999999999999999887776 5799999999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHHHHHhccCCCcceEEEEEeCcEEEEEEEeeccC
Q 003860 400 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSS 479 (791)
Q Consensus 400 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~s~~~l~~~~~~W~~~~G~P~v~v~~~~~~~~l~Q~rf~~~ 479 (791)
|||+.++|++.|++||+.|+.+|+|+|++++|||++|+...+.+++.+|+.|+.|+|||+|+|.++++.++++|+||...
T Consensus 424 RML~~~lGe~~F~~gi~~yL~~~~y~na~~~DLw~~l~~~~~~~v~~~M~~Wt~Q~G~Pvv~V~~~~~~~~l~Q~rf~~~ 503 (882)
T KOG1046|consen 424 RMLESLLGEEVFRKGLRSYLKKHQYSNAKTEDLWDALEEGSGLDVSELMDTWTKQMGYPVVTVERNGDSLTLTQERFLSD 503 (882)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHhccCCCCchhHHHHHhccCCCCHHHHHhhhhcCCCCceEEEEecCCEEEEehhhhccC
Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999887
Q ss_pred CC--CCCCeeEEEEEEEECcccceeeEEeecceeEEEecccccccccCCCCCCceEEEcCCceeEEEEEcCHHHHHHHHH
Q 003860 480 GS--PGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGY 557 (791)
Q Consensus 480 ~~--~~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~N~~~~gyyrv~Yd~~~w~~l~~ 557 (791)
.. .....|+||++|.+.+.+.....++..++..+.++. .+ +||++|.++.|||||+||+++|+.|++
T Consensus 504 ~~~~~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~l~~---------~~--~wi~~N~~~~g~yRV~Yd~~~w~~l~~ 572 (882)
T KOG1046|consen 504 PDPSEDNYLWWIPLTYTTSGSGSVPKFWLSSKSTTIKLPE---------SD--QWIKVNLEQTGYYRVNYDDENWALLIE 572 (882)
T ss_pred CCccccCcccceeEEEEcCCCCccceeeecCCCcceecCC---------CC--eEEEEeCCcceEEEEEeCHHHHHHHHH
Confidence 64 334599999999887665445678887777777764 33 699999999999999999999999999
Q ss_pred HHHh-cCCChhhHHHHHHHHHHHHHhccCChHHHHHHHhhcCCCCcHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHH
Q 003860 558 AIEM-KQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFI 636 (791)
Q Consensus 558 ~L~~-~~~~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 636 (791)
+|.. ..+++.+|++||+|+|+|+++|+++++.+|+++.||.+|++|.||..+...|..+.. +.. .+.+..++.|+.
T Consensus 573 ~l~~~~~~~~~~Ra~li~D~~~la~~~~~~~~~~l~l~~~l~~e~~~~p~~~~~~~l~~~~~-~~~--~~~~~~~~~~~~ 649 (882)
T KOG1046|consen 573 QLKNHESLSVIDRAQLINDAFALARAGRLPYSIALNLISYLKNETDYVPWSAAIRSLYKLHS-LED--TEIYSKFKEFVK 649 (882)
T ss_pred HHhhcCccCHhHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhcccccchHHHHHHHHHHHhh-ccc--chHHHHHHHHHH
Confidence 9976 689999999999999999999999999999999999999999999999999998888 444 568899999999
Q ss_pred HHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCCCCCCCCchhhhHhhheeeeccccC
Q 003860 637 SLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSAS 716 (791)
Q Consensus 637 ~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g 716 (791)
+++.+.++++||.....++ ....+|..++..||..|+++|++.|.++|..|+.. +..+|+++|.+|||.+++ +|
T Consensus 650 ~l~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~a~~~~~~~~~~~a~~~f~~~~~~--~~~ip~~lr~~vy~~~~~---~g 723 (882)
T KOG1046|consen 650 KLILPIFEKLGWSDGADSS-LDNMLRVSVLSFACRFGHEECLKKAVELFRQWLAG--TNPIPPDLREVVYCTAVQ---FG 723 (882)
T ss_pred HHHHHHHHHhcCCccccch-hHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhc--CCCCChhhhhhhhhHHHH---hc
Confidence 9999999999998755444 77899999999999999999999999999999987 778999999998887655 88
Q ss_pred CHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhcc-CcCccccceeeee-eccc--cHHHHHHHHHh
Q 003860 717 DRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLS-SEVRSQDAVYGLA-VSIE--GRETAWKWLKV 790 (791)
Q Consensus 717 ~~~~~~~l~~~y~~~~~~~ek~~ll~aL~ct~d~~ll~~~L~~~l~-~~v~~qd~~~~~~-v~~~--g~~~~w~f~~~ 790 (791)
+++.|++++++|+++....||..++.||+|+++++.++++|++.++ +.++.||...++. ++.| |.++||+|+++
T Consensus 724 ~~~~w~~~~~~y~~~~~~~e~~~~l~al~~~~~~~~l~~~l~~~~~~~~v~~qd~~~~~~~~~~~~~g~~~a~~~~~~ 801 (882)
T KOG1046|consen 724 TEEDWEQLLELYKKETTAAEKRKLLNALSCSKDPWLLQRLLDLAFDAENVRDQDVLTLLQGISGNPRGVELAWKFLQD 801 (882)
T ss_pred CHhHHHHHHHHHhccccHHHHHHHHHHhccCccHHHHHHHHHHhcccccccchhHHHHHHHHhcCcccHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988 4699999999999 8877 99999999975
|
|
| >TIGR02412 pepN_strep_liv aminopeptidase N, Streptomyces lividans type | Back alignment and domain information |
|---|
| >COG0308 PepN Aminopeptidase N [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02414 pepN_proteo aminopeptidase N, Escherichia coli type | Back alignment and domain information |
|---|
| >PRK14015 pepN aminopeptidase N; Provisional | Back alignment and domain information |
|---|
| >TIGR02411 leuko_A4_hydro leukotriene A-4 hydrolase/aminopeptidase | Back alignment and domain information |
|---|
| >PF01433 Peptidase_M1: Peptidase family M1 This is family M1 in the peptidase classification | Back alignment and domain information |
|---|
| >KOG1047 consensus Bifunctional leukotriene A4 hydrolase/aminopeptidase LTA4H [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones; Defense mechanisms; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF11838 ERAP1_C: ERAP1-like C-terminal domain; InterPro: IPR024571 This entry represents the uncharacterised C-terminal domain of zinc metallopeptidases belonging to MEROPS peptidase family M1 (aminopeptidase N, clan MA), with a single member characterised in Streptomyces lividans: aminopeptidase G [] | Back alignment and domain information |
|---|
| >KOG1932 consensus TATA binding protein associated factor [Transcription] | Back alignment and domain information |
|---|
| >COG3975 Predicted protease with the C-terminal PDZ domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF13485 Peptidase_MA_2: Peptidase MA superfamily | Back alignment and domain information |
|---|
| >PF10460 Peptidase_M30: Peptidase M30; InterPro: IPR019501 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF05299 Peptidase_M61: M61 glycyl aminopeptidase; InterPro: IPR007963 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF11940 DUF3458: Domain of unknown function (DUF3458); InterPro: IPR024601 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF04450 BSP: Peptidase of plants and bacteria; InterPro: IPR007541 These basic secretory proteins (BSPs) are believed to be part of the plants defence mechanism against pathogens [] | Back alignment and domain information |
|---|
| >PF07607 DUF1570: Protein of unknown function (DUF1570); InterPro: IPR011464 This entry represents hypothetical proteins confined to bacteria | Back alignment and domain information |
|---|
| >smart00638 LPD_N Lipoprotein N-terminal Domain | Back alignment and domain information |
|---|
| >PF10026 DUF2268: Predicted Zn-dependent protease (DUF2268); InterPro: IPR018728 This domain, found in various hypothetical bacterial proteins, as well as predicted zinc dependent proteases, has no known function | Back alignment and domain information |
|---|
| >PRK04860 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF01863 DUF45: Protein of unknown function DUF45; InterPro: IPR002725 Members of this family are found in some archaebacteria, as well as Helicobacter pylori | Back alignment and domain information |
|---|
| >PF10023 DUF2265: Predicted aminopeptidase (DUF2265); InterPro: IPR014553 This group represents a predicted aminopeptidase | Back alignment and domain information |
|---|
| >COG4324 Predicted aminopeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >PF01347 Vitellogenin_N: Lipoprotein amino terminal region; InterPro: IPR001747 This entry represents a conserved region found in several lipid transport proteins, including vitellogenin, microsomal triglyceride transfer protein and apolipoprotein B-100 [] | Back alignment and domain information |
|---|
| >smart00731 SprT SprT homologues | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 791 | ||||
| 3se6_A | 967 | Crystal Structure Of The Human Endoplasmic Reticulu | 1e-120 | ||
| 4e36_A | 967 | Crystal Structure Of The Human Endoplasmic Reticulu | 1e-119 | ||
| 2yd0_A | 897 | Crystal Structure Of The Soluble Domain Of Human En | 1e-112 | ||
| 3qnf_A | 954 | Crystal Structure Of The Open State Of Human Endopl | 1e-112 | ||
| 3mdj_A | 921 | Er Aminopeptidase, Erap1, Bound To The Zinc Aminope | 1e-111 | ||
| 4h5h_A | 908 | Crystal Structure Of Porcine Aminopeptidase-N Compl | 1e-111 | ||
| 4f5c_A | 959 | Crystal Structure Of The Spike Receptor Binding Dom | 1e-110 | ||
| 4fke_A | 909 | Crystal Structure Of Porcine Aminopeptidase-N Lengt | 1e-110 | ||
| 4hol_A | 908 | Crystal Structure Of Porcine Aminopeptidase-N Compl | 1e-110 | ||
| 4fyq_A | 903 | Human Aminopeptidase N (Cd13) Length = 903 | 1e-107 | ||
| 3q7j_A | 780 | Engineered Thermoplasma Acidophilum F3 Factor Mimic | 1e-103 | ||
| 1z1w_A | 780 | Crystal Structures Of The Tricorn Interacting Facor | 1e-103 | ||
| 3ebi_A | 890 | Structure Of The M1 Alanylaminopeptidase From Malar | 8e-31 | ||
| 3ebg_A | 889 | Structure Of The M1 Alanylaminopeptidase From Malar | 8e-31 | ||
| 3q43_A | 891 | X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin | 8e-31 | ||
| 3t8v_A | 895 | A Bestatin-Based Chemical Biology Strategy Reveals | 2e-30 | ||
| 2r59_A | 616 | Leukotriene A4 Hydrolase Complexed With Inhibitor R | 5e-24 | ||
| 3cho_A | 610 | Crystal Structure Of Leukotriene A4 Hydrolase In Co | 5e-24 | ||
| 1gw6_A | 610 | Structure Of Leukotriene A4 Hydrolase D375n Mutant | 5e-24 | ||
| 3u9w_A | 608 | Structure Of Human Leukotriene A4 Hydrolase In Comp | 5e-24 | ||
| 1hs6_A | 611 | Structure Of Leukotriene A4 Hydrolase Complexed Wit | 5e-24 | ||
| 1sqm_A | 610 | Structure Of [r563a] Leukotriene A4 Hydrolase Lengt | 6e-24 | ||
| 3b7s_A | 616 | [e296q]lta4h In Complex With Rsr Substrate Length = | 1e-23 | ||
| 1h19_A | 611 | Structure Of [e271q] Leukotriene A4 Hydrolase Lengt | 1e-23 | ||
| 2hpo_A | 891 | Structure Of Aminopeptidase N From E. Coli Suggests | 4e-22 | ||
| 2dq6_A | 870 | Crystal Structure Of Aminopeptidase N From Escheric | 5e-22 | ||
| 3puu_A | 891 | Crystal Structure Of Glu121gln Mutant Of E. Coli Am | 9e-22 | ||
| 2xq0_A | 632 | Structure Of Yeast Lta4 Hydrolase In Complex With B | 4e-19 | ||
| 2xpy_A | 632 | Structure Of Native Leukotriene A4 Hydrolase From S | 6e-19 | ||
| 3cia_A | 605 | Crystal Structure Of Cold-Aminopeptidase From Colwe | 4e-18 | ||
| 2gtq_A | 867 | Crystal Structure Of Aminopeptidase N From Human Pa | 1e-17 | ||
| 3rjo_A | 419 | Crystal Structure Of Erap1 Peptide Binding Domain L | 5e-09 |
| >pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Length = 967 | Back alignment and structure |
|
| >pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Variant N392k Length = 967 | Back alignment and structure |
| >pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 897 | Back alignment and structure |
| >pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 954 | Back alignment and structure |
| >pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin Length = 921 | Back alignment and structure |
| >pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Cleaved Poly-Alanine Length = 908 | Back alignment and structure |
| >pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of A Porcine Respiratory Coronavirus In Complex With The Pig Aminopeptidase N Ectodomain Length = 959 | Back alignment and structure |
| >pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Length = 909 | Back alignment and structure |
| >pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Poly- Alanine Length = 908 | Back alignment and structure |
| >pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13) Length = 903 | Back alignment and structure |
| >pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human Aminopeptidase N (Apn) As A Target For Anticancer Drug Development Length = 780 | Back alignment and structure |
| >pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase In Three Different Conformations Length = 780 | Back alignment and structure |
| >pdb|3EBI|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria Complexed With The Phosphinate Dipeptide Analog Length = 890 | Back alignment and structure |
| >pdb|3EBG|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria Length = 889 | Back alignment and structure |
| >pdb|3Q43|A Chain A, X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin Derivative 15 Length = 891 | Back alignment and structure |
| >pdb|3T8V|A Chain A, A Bestatin-Based Chemical Biology Strategy Reveals Distinct Roles For Malaria M1- And M17-Family Aminopeptidases Length = 895 | Back alignment and structure |
| >pdb|2R59|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3041 Length = 616 | Back alignment and structure |
| >pdb|3CHO|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex With 2-Amino-N-[4-(Phenylmethoxy)phenyl]-Acetamide Length = 610 | Back alignment and structure |
| >pdb|1GW6|A Chain A, Structure Of Leukotriene A4 Hydrolase D375n Mutant Length = 610 | Back alignment and structure |
| >pdb|3U9W|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex With Inhibitor Sc57461a Length = 608 | Back alignment and structure |
| >pdb|1HS6|A Chain A, Structure Of Leukotriene A4 Hydrolase Complexed With Bestatin. Length = 611 | Back alignment and structure |
| >pdb|1SQM|A Chain A, Structure Of [r563a] Leukotriene A4 Hydrolase Length = 610 | Back alignment and structure |
| >pdb|3B7S|A Chain A, [e296q]lta4h In Complex With Rsr Substrate Length = 616 | Back alignment and structure |
| >pdb|1H19|A Chain A, Structure Of [e271q] Leukotriene A4 Hydrolase Length = 611 | Back alignment and structure |
| >pdb|2HPO|A Chain A, Structure Of Aminopeptidase N From E. Coli Suggests A Compartmentalized, Gated Active Site Length = 891 | Back alignment and structure |
| >pdb|2DQ6|A Chain A, Crystal Structure Of Aminopeptidase N From Escherichia Coli Length = 870 | Back alignment and structure |
| >pdb|3PUU|A Chain A, Crystal Structure Of Glu121gln Mutant Of E. Coli Aminopeptidase N Length = 891 | Back alignment and structure |
| >pdb|2XQ0|A Chain A, Structure Of Yeast Lta4 Hydrolase In Complex With Bestatin Length = 632 | Back alignment and structure |
| >pdb|2XPY|A Chain A, Structure Of Native Leukotriene A4 Hydrolase From Saccharomyces Cerevisiae Length = 632 | Back alignment and structure |
| >pdb|3CIA|A Chain A, Crystal Structure Of Cold-Aminopeptidase From Colwellia Psychrerythraea Length = 605 | Back alignment and structure |
| >pdb|2GTQ|A Chain A, Crystal Structure Of Aminopeptidase N From Human Pathogen Neisseria Meningitidis Length = 867 | Back alignment and structure |
| >pdb|3RJO|A Chain A, Crystal Structure Of Erap1 Peptide Binding Domain Length = 419 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} Length = 967 | Back alignment and structure |
|---|
Score = 953 bits (2466), Expect = 0.0
Identities = 269/828 (32%), Positives = 424/828 (51%), Gaps = 65/828 (7%)
Query: 9 RLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTN- 67
RLP +P YD+ + P+LTS F S I+V V T+FI+L++ DL I N ++
Sbjct: 68 RLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEED 127
Query: 68 KVSSKALEPTKVELVEADEILVLEFAETLPTGM-GVLAIGFEGVLNDKMKGFYRSSYE-L 125
K + KV A E + L E L + +A+ F+ L D +GFY+S+Y L
Sbjct: 128 SRYMKPGKELKVLSYPAHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTL 187
Query: 126 NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK-VDGN 184
GE + +AVT FEP AR FPC+DEP KA F I + S +ALSNMP + ++G
Sbjct: 188 GGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPKVKTIELEGG 247
Query: 185 MKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTL 244
+ ++ + MSTYLVA ++ F + TS G+KV +Y K NQ +AL ++K L
Sbjct: 248 LLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQASLKLL 307
Query: 245 ELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATV 304
+ Y++YF + Y L KLD+IAIPDFA GAMEN+GL+TYRET+LL+D + S+A++K V V
Sbjct: 308 DFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRV 367
Query: 305 VAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRL 364
+AHELAHQWFGNLVTMEWW +WLNEGFA ++ +A ++ +PE + FL+ C E +
Sbjct: 368 IAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITK 427
Query: 365 DGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYAC 424
D L S PI +I E+FD +SY KGA ++ ML+++LG E FQ+ + Y+KK++
Sbjct: 428 DSLNSSRPISKPAETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSY 487
Query: 425 SNAKTEDLWAALEE---------------------------GSGEPVNKLMNSWTKQKGY 457
NAK +DLW++L G V ++M +WT QKG
Sbjct: 488 RNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWTLQKGI 547
Query: 458 PVISVKVKEEKLELEQSQFLSSGSPGDGQ---------WIVPITLCCGSYDVCKNFLLYN 508
P++ VK L L+Q +FL D + W +P+T S +V +L +
Sbjct: 548 PLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKS 607
Query: 509 KSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIE--MKQLSE 566
K+D+ D+ + W+K NV+ G+Y V Y+ +L + L
Sbjct: 608 KTDTLDLP-----------EKTSWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRP 656
Query: 567 TDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLIT-ISYKIGRIAADARP 625
DR G++ D F L A + TL L + ET L ++ + +
Sbjct: 657 KDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNIS 716
Query: 626 ELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRF 685
++ + LK++ + F+ ++ W S D +LR + L H + +A++ F
Sbjct: 717 DISENLKRYLLQYFKPVIDRQSWS--DKGSVWDRMLRSALLKLACDLNHAPCIQKAAELF 774
Query: 686 HAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLA 745
++ +P D+ K Y Q +G+ LL Y + S E+ +IL +L+
Sbjct: 775 SQWMESSGKLNIPTDVLKIVYSVGAQ-----TTAGWNYLLEQYELSMSSAEQNKILYALS 829
Query: 746 SCPDVNIVLEVLNFLLSSE-VRSQDAVY---GLAVSIEGRETAWKWLK 789
+ +L+++ + + +++Q+ +A +G++ AW +++
Sbjct: 830 TSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVR 877
|
| >1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Length = 780 | Back alignment and structure |
|---|
| >2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* Length = 632 | Back alignment and structure |
|---|
| >3b7s_A Leukotriene A-4 hydrolase; transition state, analogue peptide, hydrolysis, hydrolase, leukotriene biosynthesis, metal-binding, metalloprotease; 1.47A {Homo sapiens} SCOP: a.118.1.7 b.98.1.1 d.92.1.13 PDB: 3b7t_A 3b7r_L* 2r59_A* 3b7u_X* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* 3fu5_A* ... Length = 616 | Back alignment and structure |
|---|
| >3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} Length = 605 | Back alignment and structure |
|---|
| >3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* Length = 889 | Back alignment and structure |
|---|
| >2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Length = 867 | Back alignment and structure |
|---|
| >3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* Length = 891 | Back alignment and structure |
|---|
| >3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Length = 419 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR} Length = 597 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 791 | |||
| 3se6_A | 967 | Endoplasmic reticulum aminopeptidase 2; thermolysi | 100.0 | |
| 2xdt_A | 897 | Endoplasmic reticulum aminopeptidase 1; glycoprote | 100.0 | |
| 4fke_A | 909 | Aminopeptidase N; zinc aminopeptidase, hydrolase; | 100.0 | |
| 1z5h_A | 780 | Tricorn protease interacting factor F3; zinc amino | 100.0 | |
| 2gtq_A | 867 | Aminopeptidase N; alanine aminopeptidase, M1 famil | 100.0 | |
| 3ebh_A | 889 | PFA-M1, M1 family aminopeptidase; hydrolase, metal | 100.0 | |
| 3b34_A | 891 | Aminopeptidase N; protease, hydrolase, thermolysin | 100.0 | |
| 3cia_A | 605 | Cold-active aminopeptidase; psychrohilic, hydrolas | 100.0 | |
| 3u9w_A | 608 | Leukotriene A-4 hydrolase; hydrolase-hydrolase inh | 100.0 | |
| 2xq0_A | 632 | LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B | 100.0 | |
| 3rjo_A | 419 | Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd | 100.0 | |
| 4fgm_A | 597 | Aminopeptidase N family protein; structural genomi | 99.96 | |
| 1bqb_A | 301 | Protein (aureolysin); hydrolase, metalloproteinase | 80.27 |
| >3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-152 Score=1364.10 Aligned_cols=767 Identities=35% Similarity=0.618 Sum_probs=697.6
Q ss_pred CCCCcCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEeCCceEeEEEEEeecCCCC--CcccCeeEEEe
Q 003860 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSS--KALEPTKVELV 82 (791)
Q Consensus 5 ~~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~--~~~~~~~~~~~ 82 (791)
-..+|||++++|.||+|+|++|+++.+|+|+|+|++++.++++.|+||+++|+|+++.+.+..+... .........++
T Consensus 64 ~~~~RLP~~v~P~hY~L~L~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~I~~v~v~~~~~~~~~~~~~~~~~~~~~ 143 (967)
T 3se6_A 64 WQELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYP 143 (967)
T ss_dssp CCCSSCCTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCCSEEEEECSSCEEEEEEEEECC---CCSSCEECEEEEEG
T ss_pred cccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEEEcCCCEEEEECCCCEEEEEEEeccCCcccccccceeeeEEec
Confidence 4568999999999999999999999999999999999999999999999999999999875321100 01111222333
Q ss_pred cCCeEEEEEeCCCCCCc-eEEEEEEEEeeeCCCCcceEEeeecc-CCeeeeeccccCCCCCCCceeeccCCCCCceEEEE
Q 003860 83 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 160 (791)
Q Consensus 83 ~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~-~g~~~~~~~t~~ep~~ar~~fPc~DeP~~ka~f~i 160 (791)
.++.+.|.++++|++| .|+|+|.|+|++++++.|||++.|.+ +|+.+++++|||||++||+||||||||++||+|+|
T Consensus 144 -~~~~l~i~l~~~L~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~FPC~DeP~~KAtf~i 222 (967)
T 3se6_A 144 -AHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSI 222 (967)
T ss_dssp -GGTEEEEECSSCCCTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTGGGTSCBCCSTTCCBEEEE
T ss_pred -CCCEEEEEcCCccCCCCeEEEEEEEEEecCCCccceeeeeeEcCCCceEEEEEEecccCCCCeEEEecCCcCceeEEEE
Confidence 5678999999999999 89999999999999999999999976 78889999999999999999999999999999999
Q ss_pred EEEeCCCCeEeecCcccce-eecCCeEEEEEEcCCCCcceEEEEEEeeeeEeeccccCCeEEEEEEeCCchhhHHHHHHH
Q 003860 161 TLDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV 239 (791)
Q Consensus 161 ~i~~p~~~~~~sn~~~~~~-~~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~~~~v~v~~~~~~~~~~~~~l~~ 239 (791)
+|++|++|+|+|||++.++ ...+++++++|+.++|||||++||+||+|+.++..+.+|+++++|++|+..++++++++.
T Consensus 223 tI~~p~~~~alSN~~~~~~~~~~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al~~ 302 (967)
T 3se6_A 223 KIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQA 302 (967)
T ss_dssp EEEECTTCEEEESSCEEEEEECTTSCEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGGGGGGHHHHHH
T ss_pred EEEECCCcEEEeCCCcccceecCCCeEEEEEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcchHHHHHHHHHH
Confidence 9999999999999998765 345678999999999999999999999999988666779999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCchhHHHHHHHHHHHHHHHHHHhcCccC
Q 003860 240 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 319 (791)
Q Consensus 240 ~~~~l~~~e~~fg~~yP~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn~Vt 319 (791)
+++++++||++||+|||++|+|+|++|+|+.||||||||++|+|..+|+++..++...++.++.+||||+|||||||+||
T Consensus 303 ~~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGnlVT 382 (967)
T 3se6_A 303 SLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 382 (967)
T ss_dssp HHHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTTTEE
T ss_pred HHHHHHHHHHhcCCCCCcccccEEEecCCCCcccccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999999999999999999988888888899999999999999999999
Q ss_pred ccccchhHHhhhHHHHHHHHHhhhhCCcchhHHHHHHHHHhhhhccccCCCCceeeecCCchhhhcccccccccchhHHH
Q 003860 320 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 399 (791)
Q Consensus 320 ~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl 399 (791)
|+||+|+|||||||+|++++++++.+|+|.+...|+.+...++..|+..++||+..++.++.++...|+.++|.||++||
T Consensus 383 ~~wW~dlWLnEGFAty~e~~~~~~~~p~~~~~~~~~~~~~~al~~D~~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KGa~vL 462 (967)
T 3se6_A 383 MEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACIL 462 (967)
T ss_dssp ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHTTTTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhhcccCCCCceeecCCHHHHHHhcchhhhhHHHHHH
Confidence 99999999999999999999999999999987777666557888999999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhc---------------------------cCCCHHHHHHHhc
Q 003860 400 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG---------------------------SGEPVNKLMNSWT 452 (791)
Q Consensus 400 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~---------------------------s~~~l~~~~~~W~ 452 (791)
|||+..||++.|+++|+.|+++|+|++++++|||++|+++ +|.+|++||++|+
T Consensus 463 ~mL~~~lG~e~F~~gLr~Yl~~~~~~nat~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~ 542 (967)
T 3se6_A 463 NMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWT 542 (967)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHCC-------------------------CCCCCCHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCcCHHHHHHHHh
Confidence 9999999999999999999999999999999999999995 6889999999999
Q ss_pred cCCCcceEEEEEeCcEEEEEEEeeccCCCC---------CCCeeEEEEEEEECcccceeeEEeecceeEEEecccccccc
Q 003860 453 KQKGYPVISVKVKEEKLELEQSQFLSSGSP---------GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSI 523 (791)
Q Consensus 453 ~~~G~P~v~v~~~~~~~~l~Q~rf~~~~~~---------~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 523 (791)
.|+|||+|+|++++++++|+|+||+.++.. .+..|+|||+|.+++++....+|+..++.++.++.
T Consensus 543 ~q~G~Pvl~V~~~~~~~~l~Q~rf~~~~~~~~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~~~~------ 616 (967)
T 3se6_A 543 LQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPE------ 616 (967)
T ss_dssp HSCSCEEEEEEEETTEEEEEEEECCCC-----------CCSCCCCCCEEEEESSCCCCEEECCCSSEEEEECSS------
T ss_pred cCCCCcEEEEEecCCEEEEEeeeecCCCCCCccccccccCCceEEEEEEEEeCCCCccceEEecCCceEEeccC------
Confidence 999999999999989999999999875432 23589999999887655445577776666666642
Q ss_pred cCCCCCCceEEEcCCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHhccCChHHHHHHHhhcCCCC
Q 003860 524 SKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEET 601 (791)
Q Consensus 524 ~~~~~~~~~i~~N~~~~gyyrv~Yd~~~w~~l~~~L~~~--~~~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~l~~E~ 601 (791)
.+ +||++|.++.||||||||+++|.+|+++|..+ .|++.+|||||+|+|+||++|.++++.+|++++||++|+
T Consensus 617 ---~~--~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~ 691 (967)
T 3se6_A 617 ---KT--SWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHET 691 (967)
T ss_dssp ---CC--SCEEESGGGCSSCEEEEETTHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHTTGGGTCC
T ss_pred ---CC--ceEEEeCCccEEEEEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCC
Confidence 34 89999999999999999999999999999753 699999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 003860 602 EYTVLSNLITISYKIGRIAADA-RPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNE 680 (791)
Q Consensus 602 ~~~~w~~~~~~l~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~ 680 (791)
+|+||.++++.|..+.+++... .++.+..|++|+++++.|+++++||+ +++++.++++|..++.+||.+|+++|+++
T Consensus 692 ~~~~w~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~--~~~~~~~~~lR~~il~~ac~~g~~~c~~~ 769 (967)
T 3se6_A 692 SSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVIDRQSWS--DKGSVWDRMLRSALLKLACDLNHAPCIQK 769 (967)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTHHHHHHCCSS--CCSCHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHcCCC--CCCcHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 9999999999999999988632 25678899999999999999999998 46889999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q 003860 681 ASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFL 760 (791)
Q Consensus 681 A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~ct~d~~ll~~~L~~~ 760 (791)
|+++|++|++++....||||+|.+|||++++ ++++|+++|++|++++++.||..++.||||++|+++|+++|+++
T Consensus 770 A~~~f~~~~~~~~~~~i~~~lr~~Vyc~~~~-----~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~ 844 (967)
T 3se6_A 770 AAELFSQWMESSGKLNIPTDVLKIVYSVGAQ-----TTAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLKLIELG 844 (967)
T ss_dssp HHHHHHHHHHTTTCSCCCHHHHHHHHHHHTT-----SHHHHHHHHHHHHHCSCHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCcccCChhhhhHhHhhhhc-----cHHHHHHHHHHHhccCCHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 9999999998754446999999999998643 48899999999999999999999999999999999999999999
Q ss_pred ccCc-Cccccceeeee-eccc--cHHHHHHHHHh
Q 003860 761 LSSE-VRSQDAVYGLA-VSIE--GRETAWKWLKV 790 (791)
Q Consensus 761 l~~~-v~~qd~~~~~~-v~~~--g~~~~w~f~~~ 790 (791)
+++. ||+||+..++. |+.| |++++|+|+++
T Consensus 845 l~~~~i~~qd~~~~~~~v~~n~~g~~~~w~f~~~ 878 (967)
T 3se6_A 845 MEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRE 878 (967)
T ss_dssp HHCSSSCGGGHHHHHHHHHHSTTHHHHHHHHHHH
T ss_pred hCcCcCcHhHHHHHHHHHHcChhHHHHHHHHHHH
Confidence 9874 99999999999 8887 99999999986
|
| >4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A* | Back alignment and structure |
|---|
| >1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* | Back alignment and structure |
|---|
| >2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} | Back alignment and structure |
|---|
| >3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* | Back alignment and structure |
|---|
| >3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* | Back alignment and structure |
|---|
| >3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} | Back alignment and structure |
|---|
| >3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ... | Back alignment and structure |
|---|
| >2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* | Back alignment and structure |
|---|
| >3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR} | Back alignment and structure |
|---|
| >1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 791 | ||||
| d3b7sa3 | 252 | d.92.1.13 (A:209-460) Leukotriene A4 hydrolase cat | 3e-50 | |
| d3b7sa2 | 208 | b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-term | 1e-33 |
| >d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (442), Expect = 3e-50
Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 19/255 (7%)
Query: 218 GIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENY 276
G + V+ + + + + + L++ ++ PY + D++ + P F G MEN
Sbjct: 7 GPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLG-GPYVWGQYDLLVLPPSFPYGGMENP 65
Query: 277 GLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWV 336
L T L A + ++ V+AH+++H W GNLVT + W H WLNEG ++
Sbjct: 66 CLTFVTPTLL---------AGDKSLSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYL 116
Query: 337 SYLAADSLFPEWKIWTQFLDECTE-GLRLDGLAESHPIEVEVNHTGEID--EIFDAISYR 393
LF E L E + E+HP V +ID + ++ Y
Sbjct: 117 ERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYE 176
Query: 394 KGASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----M 448
KG +++ L+ LG E F L +Y++K++ + T+D L + V+ L
Sbjct: 177 KGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDW 236
Query: 449 NSWTKQKGYPVISVK 463
N+W G P I
Sbjct: 237 NAWLYSPGLPPIKPN 251
|
| >d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 791 | |||
| d3b7sa3 | 252 | Leukotriene A4 hydrolase catalytic domain {Human ( | 100.0 | |
| d3b7sa2 | 208 | Leukotriene A4 hydrolase N-terminal domain {Human | 100.0 | |
| d1lsha1 | 336 | Lipovitellin-phosvitin complex, superhelical domai | 93.19 | |
| d1u4ga_ | 298 | Elastase {Pseudomonas aeruginosa [TaxId: 287]} | 83.01 | |
| d1kjpa_ | 316 | Thermolysin {Bacillus thermoproteolyticus [TaxId: | 81.26 | |
| d1bqba_ | 301 | Aureolysin {Staphylococcus aureus [TaxId: 1280]} | 80.05 |
| >d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-50 Score=415.03 Aligned_cols=236 Identities=27% Similarity=0.459 Sum_probs=205.4
Q ss_pred CeEEEEEEeCCchhhHHHHHHHHHHHHHHHHHHhCCCCCCCCccEEEe-cCCCCcccccccceeeecccccccCCCchhH
Q 003860 218 GIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAA 296 (791)
Q Consensus 218 ~~~v~v~~~~~~~~~~~~~l~~~~~~l~~~e~~fg~~yP~~kld~v~~-p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~ 296 (791)
|++||||++|+..+.++++++.++++|++||++|| |||++|+|+|++ |+++.|||||||++++++..++.+..
T Consensus 7 g~~vrv~~~p~~~~~~~~~l~~~~~~l~~~e~~~g-~YP~~k~d~v~~~~~~~~ggmE~~~l~~~~~~~~~~~~~----- 80 (252)
T d3b7sa3 7 GPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS----- 80 (252)
T ss_dssp ETTEEEEECGGGHHHHHHHTTTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST-----
T ss_pred CCceEEEEccchHHHHHHHHHHHHHHHHHHHHhCC-CCCchhcCEEEeCCCccccccccceeeeecchhccccch-----
Confidence 78999999999999999999999999999999999 999999999999 68889999999999999885443322
Q ss_pred HHHHHHHHHHHHHHHHHhcCccCccccchhHHhhhHHHHHHHHHhhhhCCcchhHHHHHHHHH-hhhhccccCCCCceee
Q 003860 297 NKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEV 375 (791)
Q Consensus 297 ~~~~~~~~iaHElaHqWfGn~Vt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pi~~ 375 (791)
+..++|||+|||||||+||++||+|+||+||||+|++.+++++.+|+......+..... .....|+....+|+..
T Consensus 81 ----~~~~iaHE~aHqWfG~~Vt~~~w~~~WL~EG~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (252)
T d3b7sa3 81 ----LSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTK 156 (252)
T ss_dssp ----TTHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGS
T ss_pred ----HHHHHHHHHHHHHHhhhceeccccchHhhccHHHHHHHHhhccccchhhhhhhhhhhhhhHHHHHhhhhccCCcce
Confidence 44689999999999999999999999999999999999999999987655443333322 3345566677788765
Q ss_pred ecCCch--hhhcccccccccchhHHHHHHHHhhC-HHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHH----H
Q 003860 376 EVNHTG--EIDEIFDAISYRKGASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----M 448 (791)
Q Consensus 376 ~~~~~~--~~~~~f~~i~Y~Kg~~vl~mL~~~lG-~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~s~~~l~~~----~ 448 (791)
++.... +.+..|+.++|.||++||+||+..|| ++.|+++||.|+++|++++++++||++++++++|.+++.+ |
T Consensus 157 ~~~~~~~~~~~~~f~~~~Y~Kga~vl~mL~~~iG~~~~f~~~lr~yl~~~~~~~~~~~df~~~l~~~~~~~~~~~~~~~f 236 (252)
T d3b7sa3 157 LVVDLTDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDW 236 (252)
T ss_dssp SSCCCTTCCHHHHCSSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHHHTTSCH
T ss_pred eeccccccchhhcccceeecchhHHHHHHHHHhccHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhccccchhhHhHH
Confidence 544333 34567999999999999999999999 6789999999999999999999999999999999999988 9
Q ss_pred HHhccCCCcceEEEE
Q 003860 449 NSWTKQKGYPVISVK 463 (791)
Q Consensus 449 ~~W~~~~G~P~v~v~ 463 (791)
++|++|+|+|+|+|+
T Consensus 237 ~~W~~~~G~P~l~v~ 251 (252)
T d3b7sa3 237 NAWLYSPGLPPIKPN 251 (252)
T ss_dssp HHHHHCCSSCSSCCC
T ss_pred HHHhcCCCCCeeecc
Confidence 999999999999885
|
| >d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} | Back information, alignment and structure |
|---|
| >d1u4ga_ d.92.1.2 (A:) Elastase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1kjpa_ d.92.1.2 (A:) Thermolysin {Bacillus thermoproteolyticus [TaxId: 1427]} | Back information, alignment and structure |
|---|
| >d1bqba_ d.92.1.2 (A:) Aureolysin {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|