Citrus Sinensis ID: 003869

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790
Protein Sequence
MASIDSLPFIDMTTLTQSELRALSLCSASAFDLNRLDDVVIPAIDRSIFNESAGSRRQTFSRPSGTATTHHHHHIRHRIPVLPPSSKHHHQVSSLPPHLDPDHLENRSIINSLKQYLTQSPQFQDVVPFFGTRANDNDNDDDDKHVLMRKRKRGRKPKTKVKSLEENLVMVNKNGSVVDIVDLGSLEDPYGEELRRRTEGISANEEALLGFLRDLGGQWCSRRKKRKIVDADLLGDTLPVGWKLLLGLKRREGRASVYCRRYISPGGQHFVSCKEVSGYLQSYFGLNDTNQSINPGGDEMQQDYRVATDSLADIAQKENDQRQSNQQDKEVTLLGIDNLAEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNYVRGIEEPHGRLTLQKRTESPIRDEFPTRISKMDALIEIAQNSILETSTGGPNNEPVDDAKFDTNMDELSDQQIIENMVTTEKMKKIDDAGCLMDVKVEACVDTGTSIPADEQNGCKSEASDGKDGLVFIAEEIDKSVIERESGAESCLLAPSINQNGCPVESNVNLGCLNTVEPGEPDEVNNNKNIRVEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFPTTNAVSNKVEDEAHRIEQRHPNVTGFDDLRLDEIENMKFSFGTGQESGPLPEAPIQMSNNAGMDGSYGSSTQVESEVLLNSTSRHHLTTLCVWCGMEFSHEVVDSEMQPDSVGYMCPTCKAKISGQLGGLGSS
Secondary Structure (PSIPRED)
ccccccccEEEcccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHccccccccccccccccccEEEcccccEEEHHHcccccccHHHHHHHHHcccccHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEEcccccEEEEEEccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccHHHHHHcccHHccccccccHHHccccccHHHccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccEEcccccccccccccccccHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccEEcEEccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccEEccHHccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEHHHccHHHHHHHHHccccccccccccccccccccccHEccccccccccccccccccHHccccccHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEccccccccccccEEcccccEEEEccccEEEEHHHHHccccccHHHHHHHHcccccHHHHHHHHHHHcccccccHHHHcEEEEHHHcccccccccEEEEEEEcccccEEEEEEEEEcccccEEccHHHHHHHHHHHccccccccccccccccccEccEEccccccccEEcccccccccccccEEEEEcccccccccccccEEccccccccccHHHHHHHHHHHHccccHHccccccccccEEEEcccEEccHHHHHHHHHcccccccHHHHHHHcccccccccccEEEccccccccccccccccHHHHHHHHHHccccEcccccccccccHHccccccccccccccccccccccccccEEcccccEEEEEEEHcccccccEEccccccccccccccccccEccccccccccEEEcccccccccccccccccccccccccEEEccccccccccccccccccEEEcccccccccccccHHHHHHHHcHHHHHHHccccccccccEccccccccccccccccccHHccHHHHcccccccccccccccccEEEEcccccccccccccccccccccEEcccccccccccccccccccccccEEEEEEEEccEEEEccccccccccccccccHHHccEEccEEcccccc
Coil and Loop (DISEMBL)
masidslpfidmttLTQSELRALSLCsasafdlnrlddvvipaidrsifnesagsrrqtfsrpsgtatthhhhhirhripvlppsskhhhqvsslpphldpdhlenRSIINSLKQYltqspqfqdvvpffgtrandndnddddkHVLMRkrkrgrkpktkvKSLEENLVMVNkngsvvdivdlgsledpygeelrRRTEGISANEEALLGFLRDLggqwcsrrkkrkivdadllgdtlPVGWKLLLGlkrregraSVYCrryispggqhfvsckEVSGYLQSyfglndtnqsinpggdemqqDYRVATDSLADIAQKEndqrqsnqqdkeVTLLGIDNLAEVQVRDLFechkcemtfdeKDTYLQHLLSFHQRTTrryrlgssvgdgviikdgkfECQFCHKVFHErrrynghvgihvrnyvrgieephgrltlqkrtespirdefptrISKMDALIEIAQNSiletstggpnnepvddakfdtnmdelSDQQIIENMVTTEKmkkiddagclmdVKVEACVdtgtsipadeqngckseasdgkdGLVFIAEEIDKSvieresgaescllapsinqngcpvesnvnlgclntvepgepdevnnnknirveacsgssnvepadEKLSAAVEENLKENLLQygvsetsmsllepshgfpttnavsnkvedeahrieqrhpnvtgfddlrLDEIEnmkfsfgtgqesgplpeapiqmsnnagmdgsygsstqVESEVLLNSTSRHHLTTLCVWCgmefshevvdsemqpdsvgymcptckakisgqlgglgss
Flexible Loop (DISEMBL)
masidslpfidMTTLTQSELRALSLCSASAFDLNRLDDVVIPAIDrsifnesagsrrqtFSRPSGTATTHHHHHIRHRIPVLPPSSKHHHQVSSLPPHLDPDHLENRSIINSLKQYLTQSPQFQDVVPFFGTrandndnddddkhvlmrkrkrgrkpktkvksleenlvmvnkngsvvdivdlgsledpygEELRRRTEGISANEEALLGFLRdlggqwcsrrkkrkivdadllgdtlpvgWKLLlglkrregraSVYCRRYISPGGQHFVSCKEVSGYLQSYFGLNDTNQSINPGGDEMQQDYRVATDSLADIAQKendqrqsnqqdkeVTLLGIDNLAEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHqrttrryrlgsSVGDGVIIKDGKFECQFCHKVFherrrynghvgihvrnyvrgieephgrltlqkrtespirdefptrISKMDALIEIAQNSiletstggpnnEPVDDAKFDTNMDELSDQQIIENMVTTEKMKKIDDAGCLMDVKVEACVDTGtsipadeqngckseasdgkdgLVFIAEEIDKSVIERESGAESCLLAPSINQNGCPVESNVNLGCLNTVEPGEPDEVNNNKNIRVEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFPTTNAVSNKVEDEahrieqrhpnvtgfddlRLDEIENMKFSFGTGQESGPLPEAPIQMSNNAGMDGSYGSSTQVESEVLLNSTSRHHLTTLCVWCGMEFSHEVVDSEMQPDSVGYMCPTCKAKisgqlgglgss
Low Complexity Region (SEG)
MASIDSLPFIDMTTLTQSELRALSLCSASAFDLNRLDDVVIPAIDRSIFNESAGSRRQTFSRPSGTAtthhhhhirhriPVLPPSSKHHHQVSSLPPHLDPDHLENRSIINSLKQYLTQSPQFQDVVPFFGTRAndndnddddKHVLMrkrkrgrkpktkvkSLEENLVMVNKNGSVVDIVDLGSLEDPYGEELRRRTEGISANEEALLGFLRDLGGQWCSRRKKRKIVDADLLGDTLPVGWklllglkrregrASVYCRRYISPGGQHFVSCKEVSGYLQSYFGLNDTNQSINPGGDEMQQDYRVATDSLADIAQKENDQRQSNQQDKEVTLLGIDNLAEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNYVRGIEEPHGRLTLQKRTESPIRDEFPTRISKMDALIEIAQNSILETSTGGPNNEPVDDAKFDTNMDELSDQQIIENMVTTEKMKKIDDAGCLMDVKVEACVDTGTSIPADEQNGCKSEASDGKDGLVFIAEEIDKSVIERESGAESCLLAPSINQNGCPVESNVNLGCLNTVEPGEPDEVNNNKNIRVEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFPTTNAVSNKVEDEAHRIEQRHPNVTGFDDLRLDEIENMKFSFGTGQESGPLPEAPIQMSNNAGMDGSYGSSTQVESEVLLNSTSRHHLTTLCVWCGMEFSHEVVDSEMQPDSVGYMCPTCKAKISGQLGGLGSS
Disordered region (IsUnstruct)
*******PFIDMTTLTQSELRALSLCSASAFDLNRLDDVVIPAIDRSIF************************************************************INSLKQYLTQ**QFQDVVPFF*************************************LVMVNKNGSVVDIVDLGSLEDPY*********GISANEEALLGFLRDLGGQWCSRRKKRKIVDADLLGDTLPVGWKLLLGLKRREGRASVYCRRYISPGGQHFVSCKEVSGYLQSYFGLND******************************************VTLLGIDNLAEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNYVRGIEEP**************************ALIEI***********************************IENMVTTEKMKKIDDAGCLMDVKVEACVDTGT*******************GLVFIAEEIDKSVIER***AESCLLAPSINQNGCPVESNVNLGCLNT**********************************************************************************************************************************************LLNSTSRHHLTTLCVWCGMEFSHEVVDSEMQPDSVGYMCPTCKAKI**********
Disordered Region (DISOPRED)
*****SL*FIDMTTLTQSELRALSLCSASAFDLNRLDDVVIPAIDRSIFNESAGSRRQTFS**********************************************SIINSLKQYL*******************************************************KNGSVVDIVDLGSLEDPYGEELRRRTEGISANEEALLGFLRDLGGQWCSRRKKRKIVDADLLGDTLPVGWKLLLGLKRREGRASVYCRRYISPGGQHFVSCKEVSGYL********************************************************************ECHKCEMTFDEKDTYLQHL************************DGKFECQFCHKVFHERRRYNGHVGI***********************************************************************************************************************************************************************************************************************************************************************************************************NNAGM********************RHHLTTLCVWCGMEFSHEVVD*E*QPDSVGYMCPTCKAKIS*********
Disordered Region (DISEMBL)
MASIDSLPFIDMTTLTQSELRALSLCSASAFDLNRLDDVVIPAIDRSIFNES***********************RHRIPVLP*************PHLDPDHLENRSIINSLKQYLTQSPQFQDVVPFFGTRANDNDNDDDDKHVLMRK**********VKSLEENLVMVNKNGSVVDIVDLGSLEDPYGEELRRRTEGISANEEALLGFLRDLGGQWCSRRKKRKIVDADLLGDTLPVGWKLLLGLKRREGRASVYCRRYISPGGQHFVSCKEVSGYLQSYFGLNDTNQSINPGGDEMQQDYRVATDSLADIAQ***********DKEVTLLGIDNLAEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNYVRGIEEPHGRLTLQKRTESPIRDEFPTRISKMDALIEIAQNSILETSTGGPNNEPVDDAKFDTNMDELSDQQIIENMVTTEKMKKIDDAGCLMDVKVEACVDTGTSIPADEQNGCKSEASDGKDGLVFIAEEIDKSVIERESGAESCLLAPSINQNGCPVESNVNLGCLNTVEPGEPDEVNNNKNIRVEACS**********KLSAAVEENLKENLLQYGVSETSMSLLEPSHGFPTTNAVSNKVEDEAHRIEQRHPNVTGFDDLRLDEIENMKFSFGTGQESGPLPEAPIQMSNNAGMDGSYGSSTQVESEVLLNSTSRHHLTTLCVWCGMEFSHEVVDSEMQPDSVGYMCPTCKAKISGQLGGLGSS
Disordered Region (DISPRO)
****DSLPFIDMTTLTQSELRALSLCS**********DVVIPAIDRSIFNE*****************************************SSLPPHLDPDHLENRSIINSLKQYLTQSPQFQDVVPFFGTR*N*NDNDD*DKHVLMRKRKRGRKPKTKVKSLEENLVMVNKNGSVVDIVDLGSLEDPYGEELRRRTEGISANEEALLGFLRDLGGQWCSRRKKRKIVDADLLGDTLPVGWKLLLGLKRREGRASVYCRRYISPGGQHFVSCKEVSGYLQSYFGLND**********EMQQDYRVATDSLADIAQKENDQRQSNQQDKEVTLLGIDNLAEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNYVRGIEEPHGRLTLQKRTESPIRDEFPTRISKMDALIEIAQNSILETS**************************IENMVTTEKMKKIDDAGCLMDVKVEACVDTGTSIPADEQNGCKS**S**KDGLVFIAEEIDKSVIERESGAESCLLAPSINQNGCPVESNVNLGCLNTV****PDEVNNNKNIRVEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFPTTNAVSNKVEDEAHRIEQRHPNVTGFDDLRLDEIENMKFSFGTGQESGPLP**PIQMSNNAGMDGSYGSSTQVESEVLLNSTSRHHLTTLCVWCGMEFSHEVVDSEMQPDSVGYMCPTCKAKISGQLG*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASIDSLPFIDMTTLTQSELRALSLCSASAFDLNRLDDVVIPAIDRSIFNESAGSRRQTFSRPSGTATTHHHHHIRHRIPVLPPSSKHHHQVSSLPPHLDPDHLENRSIINSLKQYLTQSPQFQDVVPFFGTRANDNDNDDDDKHVLMRKRKRGRKPKTKVKSLEENLVMVNKNGSVVDIVDLGSLEDPYGEELRRRTEGISANEEALLGFLRDLGGQWCSRRKKRKIVDADLLGDTLPVGWKLLLGLKRREGRASVYCRRYISPGGQHFVSCKEVSGYLQSYFGLNDTNQSINPGGDEMQQDYRVATDSLADIAQKENDQRQSNQQDKEVTLLGIDNLAEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNYVRGIEEPHGRLTLQKRTESPIRDEFPTRISKMDALIEIAQNSILETSTGGPNNEPVDDAKFDTNMDELSDQQIIENMVTTEKMKKIDDAGCLMDVKVEACVDTGTSIPADEQNGCKSEASDGKDGLVFIAEEIDKSVIERESGAESCLLAPSINQNGCPVESNVNLGCLNTVEPGEPDEVNNNKNIRVEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFPTTNAVSNKVEDEAHRIEQRHPNVTGFDDLRLDEIENMKFSFGTGQESGPLPEAPIQMSNNAGMDGSYGSSTQVESEVLLNSTSRHHLTTLCVWCGMEFSHEVVDSEMQPDSVGYMCPTCKAKISGQLGGLGSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	790	2.2.26 [Sep-21-2011]
Q9LME6	524	Methyl-CpG-binding domain	no	no	0.178	0.269	0.459	3e-27

>sp|Q9LME6|MBD8_ARATH Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana GN=MBD8 PE=2 SV=1

 Score =  124 bits (311), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/161 (45%), Positives = 96/161 (59%), Gaps = 20/161 (12%)

Query: 150 KRKRGRKPKTK--VKSLE--------------ENLV--MVNKNGSVVDIVDLGSL-EDPY 190
           KRKRGR PK K  + +LE              E LV  + N+ G++VD+  L S+ EDPY
Sbjct: 238 KRKRGRPPKNKEEIMNLEKRDSAIVNISAFDKEELVVNLENREGTIVDLSALASVSEDPY 297

Query: 191 GEELRRRTEGISANEEALLGFLRDLGGQWCSRRKKRKIVDADLLGDTLPVGWKLLLGLKR 250
            EELRR T G+   EE +LGFL  L G+W +  KK+K+V+A   G  LP GW+L+L +KR
Sbjct: 298 EEELRRITVGLKTKEE-ILGFLEQLNGEWVNIGKKKKVVNACDYGGYLPRGWRLMLYIKR 356

Query: 251 REGRASVYCRRYISPGGQHFVSCKEVSGYLQSYFGLNDTNQ 291
           +     + CRRYISP GQ F +CKEVS YL+S       NQ
Sbjct: 357 KGSNLLLACRRYISPDGQQFETCKEVSTYLRSLLESPSKNQ 397

Probable transcriptional regulator (By similarity). May regulates developmental traits such as flowering time.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	790
147772680	849	hypothetical protein VITISV_021553 [Viti	0.965	0.898	0.477	0.0
224060405	837	predicted protein [Populus trichocarpa]	0.951	0.898	0.480	0.0
255569782	697	hypothetical protein RCOM_0824380 [Ricin	0.794	0.901	0.514	1e-158
296087466	590	unnamed protein product [Vitis vinifera]	0.645	0.864	0.503	1e-148
357445881	805	Methyl binding domain protein [Medicago	0.924	0.906	0.415	1e-137
356557565	443	PREDICTED: uncharacterized protein LOC10	0.493	0.880	0.516	1e-110
359492445	947	PREDICTED: uncharacterized protein LOC10	0.708	0.591	0.380	3e-90
302141964	1129	unnamed protein product [Vitis vinifera]	0.679	0.475	0.376	2e-87
224066963	1276	methyl binding domain protein [Populus t	0.569	0.352	0.369	6e-75
359475668	403	PREDICTED: uncharacterized protein LOC10	0.445	0.873	0.415	2e-69

>gi|147772680|emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera]

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/855 (47%), Positives = 528/855 (61%), Gaps = 92/855 (10%)

Query: 2   ASIDSLPFIDMTTLTQSELRALSLCSASAFDLNRLDDVVIPAIDRSIFNESAGSRRQTFS 61
           + +DSL  ID ++L+QS+L  LSL S     L + D VV+P IDR++FNESAGSRRQT+S
Sbjct: 11  SKLDSLKQIDASSLSQSDLYQLSLSSFHP-SLLQNDAVVVPKIDRTLFNESAGSRRQTYS 69

Query: 62  RPSGTATTHHHHHIRHRIPVLPPSSKHHHQVSSLPPHLDPDHLENRSIINSLKQYL--TQ 119
           R             R R+  L P+ K     +    H DP+  EN+ II+ LK  +   +
Sbjct: 70  R---ICLAPRKPRSRRRLAGLLPAPKPPPSAA----HCDPEQSENKLIIHYLKSLIGGEE 122

Query: 120 SPQFQDVVPFFGTRANDNDNDDDDKHV---------LMRKRKRGRKPKTKVKSL---EEN 167
           +P   D+        N     +    V         ++ K KRGRK +         +  
Sbjct: 123 NPSSHDLALVVSEERNHGSQSELAMVVAGGGSELGEIVEKGKRGRKKRIVAAGEGGGQRP 182

Query: 168 LVMVNKNGSVVDIVDLGSLEDPYGEELRRRTEGISANEEALLGFLRDLGGQWCSRRKKRK 227
           L +VN+NG VVD+  L S EDPYG+EL+RRT G+   EE +LG LR L GQWCSRRKKRK
Sbjct: 183 LQIVNRNGEVVDLEALASAEDPYGDELKRRTVGLD-REEEILGVLRGLDGQWCSRRKKRK 241

Query: 228 IVDADLLGDTLPVGWKLLLGLKRREGRASVYCRRYISPGGQHFVSCKEVSGYLQSYFGLN 287
           IVDA   GD LP+GWKLLLGLKRREGR SVYCRRYISP G+ FVSCKE + YLQSYFGL 
Sbjct: 242 IVDASGFGDALPIGWKLLLGLKRREGRVSVYCRRYISPSGEQFVSCKEAAAYLQSYFGLA 301

Query: 288 DTNQSINPGGDEMQQDYRVATDSLADIAQKENDQRQ-------------SNQQDKEVTLL 334
           DTNQ +    D +QQ        LA    K++D  +             S + +KEV LL
Sbjct: 302 DTNQPMGQRDDNIQQ--------LAGSTHKDDDLGEDIIPISVLPSSSISYEYEKEVALL 353

Query: 335 GIDNLAEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGK 394
           GI+NLAEV+VRDLFECHKC MTFDEKDTYLQHLLS HQRTTRRYRLG+SVGDGVI+KDGK
Sbjct: 354 GIENLAEVEVRDLFECHKCNMTFDEKDTYLQHLLSSHQRTTRRYRLGTSVGDGVIVKDGK 413

Query: 395 FECQFCHKVFHERRRYNGHVGIHVRNYVRGIEEPHGRLTLQKRTESPIRDEFPTRISKMD 454
           +ECQFCHK+F ERRRYNGHVGIHVRNYVR  E+  GR ++QK  ESP RDE P+R SKMD
Sbjct: 414 YECQFCHKIFQERRRYNGHVGIHVRNYVRNFEDMPGRPSVQKTVESPSRDELPSRTSKMD 473

Query: 455 ALIEIAQNSILETSTGGPNNEP------------------------------------VD 478
           ALIEIAQ+SI ETS   P++EP                                    ++
Sbjct: 474 ALIEIAQSSIFETSAAAPSDEPNGVCTFGNPDVISTPEVPTADSEHEQNLGFCLGEPEME 533

Query: 479 DAKFDTNMDELSDQQIIENMVTTEKMKKID---DAGCLMDVKVEACVDTGTSIPADEQNG 535
           D+  +  +DE  DQQ  + ++  E  +KI+   DA C   +K++ C+DT T++  +++NG
Sbjct: 534 DSITNRTLDEELDQQEGDCVMADENTEKINGDSDAAC---IKMDCCLDTTTTLSTNDKNG 590

Query: 536 CKSEASDGKDGLVFIAEEIDKSVIERESGAESCLLAPSINQNGCPVESNVNLGCLNTVEP 595
           C SE+ DGK G+ F   E++KS  E+ S  E+ LL PS NQ    VE+N+N    +  E 
Sbjct: 591 CSSESFDGKYGVSFSNNEVEKSGFEQRS-PETHLLTPSSNQTVFDVENNMN----DISEQ 645

Query: 596 GEPDEVNNNKNIRVEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHG 655
            +P  V   +N  +    GSS++   ++  +  + +  ++N+ Q  VS++SM L+ P H 
Sbjct: 646 SKPGGVEEYENSGLTRGYGSSDIGRDNDVATMTMSQTPEDNVYQNRVSDSSMPLVHPLHS 705

Query: 656 FPTTNAVSNKVEDEAHRIEQRHPNVTGFDDLRLDEIENMKFSFGTGQESGPLPEAPIQMS 715
           FPT NA+S+K EDE   ++Q+  N TGF++L+LDEIE++KF F T Q    LPE  + + 
Sbjct: 706 FPTYNAISDKGEDEFCCVDQKLQNTTGFEELKLDEIESLKFGFVTEQGPLSLPEVHMGLE 765

Query: 716 NNAGMDGSYGSSTQVE-SEVLLNSTSRHHLTTLCVWCGMEFSHEVVDSEMQPDSVGYMCP 774
           N A M+  + SS   E  EV+L+ T RH LTT CVWC +EFSHE V+SEMQ DSVG+MCP
Sbjct: 766 NGATMEDGFDSSIGFEPEEVMLSMTGRHQLTTACVWCRVEFSHEAVESEMQSDSVGFMCP 825

Query: 775 TCKAKISGQLGGLGS 789
           TCK+KISGQL  L S
Sbjct: 826 TCKSKISGQLNVLDS 840

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060405|ref|XP_002300183.1| predicted protein [Populus trichocarpa] gi|222847441|gb|EEE84988.1| predicted protein [Populus trichocarpa]

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/837 (48%), Positives = 507/837 (60%), Gaps = 85/837 (10%)

Query: 7   LPFIDMTTLTQSELRALSLCSASAFDLNRLDDVVIPAIDRSIFNESAGSRRQTFSRPSGT 66
           LP+IDMTTL+QSEL  LSL  ++    +  ++ + P IDR+ FNESAGSRRQTF+RPS  
Sbjct: 25  LPYIDMTTLSQSELHKLSLTFSTP--PSTTNNTITPTIDRTNFNESAGSRRQTFARPSHH 82

Query: 67  ATTHHHHHIRHRIPVLPPSSKHHHQVSSLPPHLDPDHLENRSIINSLKQYLTQSPQFQ-- 124
                            P +K H    + P   DPD LEN +II  LK  L+  P+FQ  
Sbjct: 83  HHR--------HRLAATPFTKTHPDPPNNPIPNDPDRLENPTIIKFLKNLLSSHPEFQEP 134

Query: 125 ------DVVPFFGTRANDNDNDDDDKHVL----------MRKRKRGRKPKTKVKSLEENL 168
                 D    F        N    + VL           ++ ++ +     +   E  L
Sbjct: 135 DFSVEFDTFNHFNHPITIISNSLKPRQVLDFDMPPGVRKRKRGRKPKVKALSIVHREMGL 194

Query: 169 VMVNKNGSVVDIVDLGSLEDPYGEELRRRTEGISANEEALLGFLRDLGGQWCSRRKKRKI 228
            +VN+ G VVD+V L  L+DPY +EL+RRTEG+   EE LLGF R+LGGQWCSRRKKRKI
Sbjct: 195 EIVNRKGVVVDLVGLACLDDPYKDELKRRTEGMEKEEE-LLGFFRELGGQWCSRRKKRKI 253

Query: 229 VDADLLGDTLPVGWKLLLGLKRREGRASVYCRRYISPGGQHFVSCKEVSGYLQSYFGLND 288
           VDA   GD LPVGWKL+LGLKR+EGRA VYCRRY+SP GQ F+SCK+VS YLQS  G  D
Sbjct: 254 VDAGEFGDFLPVGWKLILGLKRKEGRAWVYCRRYLSPSGQQFISCKDVSAYLQSLVGPYD 313

Query: 289 TNQSINPGGDEMQQDYRVATDSLADIAQKENDQRQSNQQDKEVTLLGIDNLAEVQVRDLF 348
             Q+ +  G  +QQD+  A  + A   ++  DQRQS +  K+V+LL  DNLAEVQ+RDLF
Sbjct: 314 AQQAKDHTGHSIQQDHGGAPHAGA--IERLEDQRQSIEHQKQVSLLETDNLAEVQIRDLF 371

Query: 349 ECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERR 408
           ECHKC MTFDEK TYL+HLLSFHQRTTRRYRLGSSVGDGVI+KDGKFECQFCHKVFHERR
Sbjct: 372 ECHKCRMTFDEKGTYLEHLLSFHQRTTRRYRLGSSVGDGVIVKDGKFECQFCHKVFHERR 431

Query: 409 RYNGHVGIHVRNYVRGIEE--------------PHGRLTLQKRTESPIRDEFPTRISKMD 454
           RYNGHVGIHVRNYVRGIE+              P  +L LQK ++ P  D+ PTRISKMD
Sbjct: 432 RYNGHVGIHVRNYVRGIEDSPGVKNYMRGIEESPAVQLALQK-SDPPTPDDLPTRISKMD 490

Query: 455 ALIEIAQNSILETSTGGPNNEP--VDDAKFDTNMDE-------------LSD-------- 491
           ALIEIAQNSI ETS+ G N+E   V D+K   ++ E             + D        
Sbjct: 491 ALIEIAQNSIRETSSSGANDEQNVVSDSKLPASVSEHELNSDSPPSEPQMEDSIPGKSLE 550

Query: 492 ----QQIIENMVTTEKMKKIDDAGCLMDVKVEACVDTGTSIPADEQNGCKSEASDGKDGL 547
               QQ ++ MV  EKM+K++DA  + D K        T   AD Q+    E+    DGL
Sbjct: 551 LNLHQQKVDFMVIDEKMEKVEDASDVQDFK--------TVSSADAQHHNTFESLSRNDGL 602

Query: 548 VFIAEEIDKSVIERESGAESCLLAPSINQNGCPVESNVNLGCLNTVEPGEPDEVNNNKNI 607
                EI +S I+ E+ +ES  LAP   Q     ESN+     +     +PDEV+ + N+
Sbjct: 603 APGTNEIGRSGIKGETVSESHSLAPVNTQKIFGAESNMIFVGFDRPHQHKPDEVDKSVNV 662

Query: 608 RVEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFPTTNAVSNKVE 667
            ++   GS+N       +      + KEN+L+ GV E  + L    H F T  A+ +K E
Sbjct: 663 EMKIGFGSNNSIADGNAIQDTGGHSFKENVLKCGVPEQQLQL---PHDFSTPEAIVDKGE 719

Query: 668 DEAHRIEQRHPNVTGFDDLRLDEIENMKFSFGTGQESGPLPEAPIQMSNNAGMDGSYGSS 727
           +E    +Q H  VTGFD+L+LDEIE++KFS GTGQE   L E P+ + N   M+ +Y +S
Sbjct: 720 NEFGTADQIHAKVTGFDELKLDEIEHLKFSLGTGQEPMSLHEVPLGLGNITEMEAAYDAS 779

Query: 728 TQVESEVLLNSTSRHHLTTLCVWCGMEFSHEVVDSEMQPDSVGYMCPTCKAKISGQL 784
            Q ES+V++++  R  LTT+CVWCG EFSHE  D+EMQ  SVGYMCP CKAKISGQL
Sbjct: 780 LQFESDVIVDTADR-QLTTVCVWCGAEFSHEAFDTEMQSGSVGYMCPDCKAKISGQL 835

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569782|ref|XP_002525855.1| hypothetical protein RCOM_0824380 [Ricinus communis] gi|223534860|gb|EEF36549.1| hypothetical protein RCOM_0824380 [Ricinus communis]

 Score =  567 bits (1461), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 367/713 (51%), Positives = 471/713 (66%), Gaps = 85/713 (11%)

Query: 7   LPFIDMTTLTQSELRALSLCSASAFDLNRLDDVVIPAI-DRSIFNESAGSRRQTFSRPSG 65
           LPF+DMTTLTQSEL ALSL S+S+ + N ++ +  P   DR++FNESAGSRRQT+SRPS 
Sbjct: 13  LPFVDMTTLTQSELHALSLFSSSSLNPNNINIITPPITIDRTLFNESAGSRRQTYSRPS- 71

Query: 66  TATTHHHHHIRHRIP-VLPPSSKHHHQVSSLPPHLDPDHLENRSIINSLKQYLTQSPQFQ 124
              +HHH   RHR+  +LP ++  +    S  P  D D +EN +II  LKQ L+  P+F 
Sbjct: 72  ---SHHH---RHRLAGLLPKTTTQNPNFPSENP--DTDRIENHAIIKFLKQLLSSHPEFN 123

Query: 125 --DVVPFFG-TRAND--NDNDDDDKHVLMRKRKRGRKPKTKVKSL--EENLVMVNKNGSV 177
             D++ F   T  ND  N N+++  +V ++KRKRGRK K KV S+  E    +VNKNG V
Sbjct: 124 QLDLIDFDSFTHLNDAINFNNNNINNVQVKKRKRGRKAKLKVISVVEEREREIVNKNGVV 183

Query: 178 VDIVDLGSLEDPYGEELRRRTEGISANEEALLGFLRDLGGQWCSRRKKRKIVDADLLGDT 237
           +D+V L SLEDPY EEL+RRTEG+   EE LLGF RDLGGQWCSRR+KRKIVDA   GD 
Sbjct: 184 IDLVKLASLEDPYREELKRRTEGM-VKEEELLGFFRDLGGQWCSRRRKRKIVDASEFGDF 242

Query: 238 LPVGWKLLLGLKRREGRASVYCRRYISPGGQHFVSCKEVSGYLQSYFGLNDTNQSINPGG 297
           LP GWKLLLGLKR+EG+A VYCRRYISP GQ F+SCKEVS YLQS     D +   N   
Sbjct: 243 LPFGWKLLLGLKRKEGKAWVYCRRYISPSGQQFISCKEVSAYLQSCLKPYDHSNGNN--- 299

Query: 298 DEMQQDYRVATDSLADIAQKENDQRQSNQQDKEVTLLGIDNL--AEVQVRDLFECHKCEM 355
              +Q +RVA+++ A  + +E DQRQ ++ +K V+LLGIDNL  AEVQ++DLFECHKC M
Sbjct: 300 ---RQVHRVASENHAGTSGREEDQRQPSEHEKAVSLLGIDNLELAEVQIQDLFECHKCNM 356

Query: 356 TFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVG 415
           TFD+KDTYLQHLLSFHQRTTRRYRLGSSVGDGVI+KDGK+ECQFCHKVFHERRRYNGHVG
Sbjct: 357 TFDDKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIVKDGKYECQFCHKVFHERRRYNGHVG 416

Query: 416 IHVRNYVRGIEE-PHGRLTLQKRTESPIRDEFPTRISKMDALIEIAQNSILETS------ 468
           IHVRNYVRGIEE P  R+ LQKR+ESP +DE P RISKMDALIEIAQNSI ETS      
Sbjct: 417 IHVRNYVRGIEESPSTRMALQKRSESPTKDELPARISKMDALIEIAQNSIRETSSDRNGE 476

Query: 469 -TGG---------PNNE---PVDDAKFDTN------------MDELSD----QQIIENMV 499
            +GG         PN E    V D + +++            +DE  +    QQ  ++M+
Sbjct: 477 PSGGFSSDKPNMVPNQELLASVSDHELNSDSTLSEPDKEYDMIDESQELGLHQQKTDDMI 536

Query: 500 TTEKMKKIDDAGCLMDVKVEACVDTGTSIPADEQNGCKSEASDGKDGLVFIAEEIDKSVI 559
             E+++KID AG +++V V++         A+EQ+G  SEA  G D  +   +EI KSVI
Sbjct: 537 IDERIEKIDGAGDVLNVMVDSS--------AEEQHGNTSEAFGGTDCPLVHTDEIVKSVI 588

Query: 560 ERESGAE------SCLLAPSINQNGCPVESNVNLGCLNTVEPGEPDEVNNNKNIRVEACS 613
           E+ESG E         LAP  +     ++SN+NL  + T      D  ++ ++I VE   
Sbjct: 589 EQESGFELQSHDRLQSLAPLDDHQVSRIDSNMNL--VGT------DNQDSYESIEVEFGF 640

Query: 614 GSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFPTTNAVSNKV 666
            S+N  P ++ +    ++++K++ LQ G+ E   +LL+PSH     N   + V
Sbjct: 641 QSNNGIPDNKIVQETGQKSMKKDELQDGMPELPATLLQPSHDISAPNVSLDNV 693

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087466|emb|CBI34055.3| unnamed protein product [Vitis vinifera]

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 289/574 (50%), Positives = 373/574 (64%), Gaps = 64/574 (11%)

Query: 147 LMRKRKRGRKPKTKVKSL---EENLVMVNKNGSVVDIVDLGSLEDPYGEELRRRTEGISA 203
           ++ K KRGRK +         +  L +VN+NG VVD+  L S EDPYG+EL+RRT G+  
Sbjct: 13  IVEKGKRGRKKRIVAAGEGGGQRPLQIVNRNGEVVDLEALASAEDPYGDELKRRTVGLD- 71

Query: 204 NEEALLGFLRDLGGQWCSRRKKRKIVDADLLGDTLPVGWKLLLGLKRREGRASVYCRRYI 263
            EE +LG LR L GQWCSRRKKRKIVDA   GD LP+GWKLLLGLKRREGR SVYCRRYI
Sbjct: 72  REEEILGVLRGLDGQWCSRRKKRKIVDASGFGDALPIGWKLLLGLKRREGRVSVYCRRYI 131

Query: 264 SPGGQHFVSCKEVSGYLQSYFGLNDTNQSINPGGDEMQQDYRVATDSLADIAQKENDQRQ 323
           SP G+ FVSCKE + YLQSYFGL DTNQ +    D +QQ  R++++SLA    K++D  +
Sbjct: 132 SPSGEQFVSCKEAAAYLQSYFGLADTNQPMGQRDDNIQQVNRISSESLAGSTHKDDDLGE 191

Query: 324 -------------SNQQDKEVTLLGIDNLAEVQVRDLFECHKCEMTFDEKDTYLQHLLSF 370
                        S + +KEV LLGI+NLAEV+VRDLFECHKC MTFDEKDTYLQHLLS 
Sbjct: 192 DIIPISVLPSSSISYEYEKEVALLGIENLAEVEVRDLFECHKCNMTFDEKDTYLQHLLSS 251

Query: 371 HQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNYVRGIEEPHG 430
           HQRTTRRYRLG+SVGDGVI+KDGK+ECQFCHK+F ERRRYNGHVGIHVRNYVR  E+  G
Sbjct: 252 HQRTTRRYRLGTSVGDGVIVKDGKYECQFCHKIFQERRRYNGHVGIHVRNYVRNFEDMPG 311

Query: 431 RLTLQKRTESPIRDEFPTRISKMDALIEIAQNSILETSTGGPNNEP-------------- 476
           R ++QK  ESP RDE P+R SKMDALIEIAQ+SI ETS   P++EP              
Sbjct: 312 RPSVQKTVESPSRDELPSRTSKMDALIEIAQSSIFETSAAAPSDEPNGVCTFGNPDVIST 371

Query: 477 ----------------------VDDAKFDTNMDELSDQQIIENMVTTEKMKKID---DAG 511
                                 ++D+  +  +DE  DQQ  + ++  E  +KI+   DA 
Sbjct: 372 PEVPTADSEHEQNLGFCLGEPEMEDSITNRTLDEELDQQEGDCVMADENTEKINGDSDAA 431

Query: 512 CLMDVKVEACVDTGTSIPADEQNGCKSEASDGKDGLVFIAEEIDKSVIERESGAESCLLA 571
           C   +K++ C+DT T++  +++NGC SE+ DGK G+ F   E++KS  E+ S  E+ LL 
Sbjct: 432 C---IKMDCCLDTTTTLSTNDKNGCSSESFDGKYGVSFSNNEVEKSGFEQRS-PETHLLT 487

Query: 572 PSINQNGCPVESNVNLGCLNTVEPGEPDEVNNNKNIRVEACSGSSNVEPADEKLSAAVEE 631
           PS NQ    VE+N+N    +  E  +P  V   +N  +    GSS++   ++  +  + +
Sbjct: 488 PSSNQTVFDVENNMN----DISEQSKPGGVEEYENSGLTRGYGSSDIGRDNDVATMTMSQ 543

Query: 632 NLKENLLQYGVSETSMSLLEPSHGFPTTNAVSNK 665
             ++N+ Q  VS++SM L+ P H FPT NA+S+K
Sbjct: 544 TPEDNVYQNRVSDSSMPLVHPLHSFPTYNAISDK 577

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445881|ref|XP_003593218.1| Methyl binding domain protein [Medicago truncatula] gi|355482266|gb|AES63469.1| Methyl binding domain protein [Medicago truncatula]

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 349/840 (41%), Positives = 469/840 (55%), Gaps = 110/840 (13%)

Query: 4   IDSLPFIDMTTLTQSELRALSLCSASAFDLNRLDDVVIPAIDRSIFNESAGSRRQTFSRP 63
           ++ L  ID TTLT SEL+ALSL S S+FDLN   ++V P ID S FN SAGS R T+SRP
Sbjct: 15  MECLTSIDSTTLTHSELQALSLSSLSSFDLNSTREIVTPKIDPSTFNHSAGSHR-TYSRP 73

Query: 64  SGTATTHHHHHIRHRIPVLPPSSKHHHQVSSLPPHLDPDHLENRSIINSLKQYLTQSPQF 123
                     H R R+      +               DH   R II+ LKQ++ + P+F
Sbjct: 74  ----------HRRCRVAPPLLPTPTLPS----------DH---RIIIDYLKQFIREDPKF 110

Query: 124 QDVVPFFGTRANDNDNDDDDKHVLMRKRKRGRKPKTKVKSLEENLVMVNKNGSVVDIVDL 183
            D V        +             ++++  +       LEE +V  NKNG V+D   L
Sbjct: 111 -DTVELRNPSIPEVKEFPLALPAGEVRKRKRGRKPKVKAHLEEEIV--NKNGVVIDFAAL 167

Query: 184 GSLEDPYGEELRRRTEGISANEEALLGFLRDLGGQWCSRRKKRKIVDADLLGDTLPVGWK 243
             +E P+  E+ RRTEG+   EE L   L DL GQW SRR+KR+IVDA   GD LP+GWK
Sbjct: 168 SEVEHPFAAEIARRTEGLKEEEELLGF-LSDLVGQWGSRRRKRRIVDASDFGDVLPLGWK 226

Query: 244 LLLGLKRREGRASVYCRRYISPGGQHFVSCKEVSGYLQSYFGLNDTNQSINPGGDEMQQD 303
           LLL LKR++GRA +YCRRYISP GQ F+SCKEVS YLQS FG  D    I    + +  +
Sbjct: 227 LLLSLKRKDGRAWIYCRRYISPNGQQFLSCKEVSSYLQSLFGHADAQLQITQRSENILPE 286

Query: 304 YRVATDSL-----ADIAQKENDQRQ-------------SNQQDKEVTLLGIDNLAEVQVR 345
            RV T+++     A +A+KE DQRQ              N++ KE+ LL +DNLA+VQ+R
Sbjct: 287 LRVTTENVSNPAAASVARKEQDQRQIVATNSDASGLSVYNERFKEIALLEMDNLADVQIR 346

Query: 346 DLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFH 405
           DLFECHKC MTFDEKD YLQHLLS HQ+TTRRYRLGSSV DGVIIKDGKFECQFCHKVF 
Sbjct: 347 DLFECHKCSMTFDEKDAYLQHLLSIHQKTTRRYRLGSSVSDGVIIKDGKFECQFCHKVFL 406

Query: 406 ERRRYNGHVGIHVRNYVRGIEEPHGRLTLQKRTESPIRDEFPTRISKMDALIEIAQNSIL 465
           E+RRYN HVGIHVRNY+R  E+  G+  +    ESP+ DE P+RI+KMDALIEIAQNSI+
Sbjct: 407 EKRRYNSHVGIHVRNYLRRAEDLPGQPNVLGAEESPVTDETPSRITKMDALIEIAQNSII 466

Query: 466 ETSTGGP------NNEPVD-----DAKFDTNMDELSDQQIIENMVTTEK----------- 503
           E S   P      N  PV      D   D N +    +Q +E  +T              
Sbjct: 467 EDSVREPYCSSTLNTIPVSEIAVGDLDEDINAESPFGEQKMEKSLTGTNVVSDLNQQGSP 526

Query: 504 -------MKKIDDAGCLMDVKVEACVDTGTSIPADEQNGCKSEASDGKDGLVFIAEEIDK 556
                  +++ID    ++D K+ + +D    +  +++N    + S+GK  +    E  D+
Sbjct: 527 RLPMDGTIEEIDANNRVVDAKMVSFLDNMGLLSVNKKNVDAPDTSEGKGDVALTVEGFDR 586

Query: 557 SVIERESGAESCLLAPSINQNGCPVESNVNLGCLNTVEPGEPDEVNNNKN---IRVEACS 613
           S  E +  ++S LL  S N      + + N GC  T    + DE ++NK+   I +++C 
Sbjct: 587 SGSELQGASQSPLLHSSGNHMKPGSKKSENSGCTKTRGDLKLDEDSSNKSDLKIGLDSCK 646

Query: 614 ---GSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFPTTNAVSNKVEDEA 670
              G SNV       S        EN++Q  VS  S+S   P     + +A S+      
Sbjct: 647 DVPGVSNVHVTAMPTST-------ENVVQSKVSNPSVS---PEQSLDSFSAFSSD----- 691

Query: 671 HRIEQRHPNVTGFDDLRLDEIENMKFSFGTGQESGPLPEAPIQMSNNAGMDGSYGSSTQV 730
                      GF +LRL++I ++++ F +    G L +   +++N+  + G+  SS   
Sbjct: 692 ----------KGFPELRLEDIGSLEYDFAS--VPGSL-DVSTELANDIVVQGTCTSSAHS 738

Query: 731 ES-EVLLNSTSRHHLTTLCVWCGMEFSHEVVDSEMQPDSVGYMCPTCKAKISGQLGGLGS 789
            S EV+LN   ++ LTT CVWCG+EF+H+ V+SE+Q DSVG+MCP CKAKISGQ+  L S
Sbjct: 739 ASQEVMLNMDYKNQLTTTCVWCGIEFNHDAVNSEIQSDSVGFMCPVCKAKISGQINVLDS 798

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557565|ref|XP_003547086.1| PREDICTED: uncharacterized protein LOC100820612 [Glycine max]

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 221/428 (51%), Positives = 283/428 (66%), Gaps = 38/428 (8%)

Query: 38  DVVIPAIDRSIFNESAGSRRQTFSRPSGTATTHHHHHIRHRIPVLPPSSKHHHQVSSLPP 97
           D++ P ID ++FN+S GS RQT+S P  + T       R R+  L PS K     +    
Sbjct: 36  DLLTPKIDPALFNQSTGSHRQTYSLPHSSPTAR-----RRRLAGLLPSPKLPPLPAH--- 87

Query: 98  HLDPDHLENRSIINSLKQYLTQSPQFQDVVPFFGTRANDNDNDDDDKHVLMRKRKRGRKP 157
             DP++ ENR II+ LKQ++   P F  V     +                 +RKRGR P
Sbjct: 88  --DPENAENRLIIDYLKQFIRDDPNFDQVELAPPSLPQPRI-----------QRKRGRNP 134

Query: 158 KTKVK--SLEENLVMVNKNGSVVDIVDLGSLEDPYGEELRRRTEGISANEEALLGFLRDL 215
           K KV        + +VN+NG  VD+  L + +DP+ EEL+RRTEG+  NEE LLGFLRDL
Sbjct: 135 KVKVHLDDCYRGIDIVNQNGVSVDLQLLANSQDPFAEELKRRTEGLH-NEEELLGFLRDL 193

Query: 216 GGQWCSRRKKRKIVDADLLGDTLPVGWKLLLGLKRREGRASVYCRRYISPGGQHFVSCKE 275
            GQW SRRKKR+IVD+   GD LP+ WK+LLGLKR++GRA +YCRRYISP GQHFVSCKE
Sbjct: 194 PGQWGSRRKKRRIVDSADFGDVLPLSWKILLGLKRKDGRAWIYCRRYISPSGQHFVSCKE 253

Query: 276 VSGYLQSYFGLNDTNQSINPGGDEMQQDYRVATDSLADIAQKENDQRQ------------ 323
           VS YLQS  G  D    I+   + + Q+++++ D+ A + ++  D+ Q            
Sbjct: 254 VSSYLQSLLGNGDAQLQISRRTENVVQEHKLSADNSAAVTKEHQDEMQIVAVNMAVSGLS 313

Query: 324 -SNQQDKEVTLLGIDNLAEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGS 382
            +N++ KEV LLGI+NLA+VQ+ DL EC KC M+F+EKD YLQHLLSFHQRTTRRYRLGS
Sbjct: 314 AANERVKEVALLGIENLADVQIHDLLECRKCNMSFNEKDLYLQHLLSFHQRTTRRYRLGS 373

Query: 383 SVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNYVRGIEEPHGRLTLQKRTE-SP 441
           SVGDGVIIKDGKFECQFCHKVF ERRRYNGHVGIHVRNYVR +E+  G+  +Q   + SP
Sbjct: 374 SVGDGVIIKDGKFECQFCHKVFLERRRYNGHVGIHVRNYVRKVEDSPGQPNVQGTDDKSP 433

Query: 442 IRDEFPTR 449
           +R++FP +
Sbjct: 434 VREDFPFK 441

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359492445|ref|XP_002284140.2| PREDICTED: uncharacterized protein LOC100248904 [Vitis vinifera]

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 241/633 (38%), Positives = 332/633 (52%), Gaps = 73/633 (11%)

Query: 4   IDSLPFIDMTTLTQSELRALSLCSASAFDLNRLDDVVIPAIDRSIFNESAGSRRQTFSRP 63
           +++LP ID+  L+QSEL+ALSL S+ + DL R DDVVIP IDRSIFNESAGSR+QT+SR 
Sbjct: 14  LEALPLIDLRFLSQSELQALSLTSSHSSDLRRCDDVVIPKIDRSIFNESAGSRKQTYSR- 72

Query: 64  SGTATTHHHHHIRHRIPVLPPSSKHHHQVSSLPPHLDPDHLENRSIINSLKQYLTQSPQF 123
                      I   IP  P  S H +Q ++L    +P   EN  II  LK         
Sbjct: 73  --LRLAPRKPDIAATIPRRPRFSPHLNQKAAL----EPVDEENTLIIGLLKGLFATETHA 126

Query: 124 QDVVPF-FGTRANDNDNDDDDKHVLM----RKRKRGRKPKTKVKSLEENLV--------M 170
            D++P     R + N+   +    ++    RKRKRGR    K  ++ +N          +
Sbjct: 127 DDLIPVQVEYRESSNEILQNIPIDVVADSGRKRKRGRPKSEKTIAVYQNGGSGEGGGMGI 186

Query: 171 VNKNGSVVDIVDLGSLEDPYGEELRRRTEGISANEEALLGFLRDLGGQWCSRRKKRKIVD 230
           +N NG VVD+  L + EDP+G ELRRRTEG++  EE LLGFL  L GQW SRRKKRKIV+
Sbjct: 187 INNNGVVVDVAALANAEDPFGPELRRRTEGLTT-EEELLGFLTGLSGQWGSRRKKRKIVE 245

Query: 231 ADLLGDTLPVGWKLLLGLKRREGRASVYCRRYISPGGQHFVSCKEVSGYLQSYFGLNDTN 290
           A   GD LP GWKLLL +KR+EGR  ++CRRYISP GQ FVSCKEVS  L S  GL D  
Sbjct: 246 ASDFGDVLPQGWKLLLSMKRKEGRVWLFCRRYISPNGQQFVSCKEVSSCLLSLSGLQDAR 305

Query: 291 QSINPGGDEMQQ-DYRVATDSLADIAQKENDQRQS-------------NQQDKEVTLLGI 336
           Q      DE  Q  ++++  + A +  K+++ +                  +K+ TLL +
Sbjct: 306 QPNYGHNDENSQLAHQISPGNAAGLTLKDDNSKDGLVCSSPSTVTTIPTHHEKQATLLNM 365

Query: 337 DNLAEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFE 396
            N  EV+V ++ +CHKC MTFDEKD  L HL S H  T    +L SS+ + VI+K+GK+E
Sbjct: 366 GNSWEVKVGEILKCHKCAMTFDEKDDLLHHLSSSHNGTANSCKLSSSICNEVIMKEGKYE 425

Query: 397 CQFCHKVFHERRRYNGHVGIHVRNYVRGIE--------EPHGRL---TLQKRTESPIRDE 445
           C+FCH++FHE   YN HV IH +  V+  E         P   L   +++K T     D 
Sbjct: 426 CRFCHEIFHEENGYNRHVEIHTKTSVKNAETSVLNSDPTPLDGLVSDSIEKTTNGQANDG 485

Query: 446 FPTRISKMDALIEIAQNSILETSTGGPNNE----------PVDDAKFDTNMDELSDQQII 495
               ++          +SI ET  G  NN             +D  F    DE  D+Q  
Sbjct: 486 MSFGLTHKTP----KADSIKETHIGKSNNSFFHMGQHFEVTQNDGTF---ADESVDEQDK 538

Query: 496 ENMVTTEKMKKIDDAGCLMDVK---VEACVDTGTSIPADEQNGCKSEASDGKDGLVFIAE 552
           +     +++ K+ +A  ++  K    EA + T        ++    +AS+  + L    +
Sbjct: 539 DCNTRNDRLGKVHEAPDILAAKTSLAEAALSTS-------EDRSIQKASNESNVLKCPTD 591

Query: 553 EIDKSVIERESGAESCLLAPSINQNGCPVESNV 585
            I++     E  +ES  +APS NQ  C VE NV
Sbjct: 592 GINELCGSEERISESYSVAPSENQQTCEVEDNV 624

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302141964|emb|CBI19167.3| unnamed protein product [Vitis vinifera]

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 232/617 (37%), Positives = 317/617 (51%), Gaps = 80/617 (12%)

Query: 4   IDSLPFIDMTTLTQSELRALSLCSASAFDLNRLDDVVIPAIDRSIFNESAGSRRQTFSRP 63
           +++LP ID+  L+QSEL+ALSL S+ + DL R DDVVIP IDRSIFNESAGSR+QT+SR 
Sbjct: 16  LEALPLIDLRFLSQSELQALSLTSSHSSDLRRCDDVVIPKIDRSIFNESAGSRKQTYSR- 74

Query: 64  SGTATTHHHHHIRHRIPVLPPSSKHHHQVSSLPPHLDPDHLENRSIINSLKQYLTQSPQF 123
                      I   IP  P  S H +Q ++L    +P   EN  II  LK         
Sbjct: 75  --LRLAPRKPDIAATIPRRPRFSPHLNQKAAL----EPVDEENTLIIGLLKGLFATETHA 128

Query: 124 QDVVPFFGTRANDNDNDDDDKHVLMRKRKRGRKPKTKVKSLEENLVMVNKNGSVVDIVDL 183
            D++P                 V +  R+ G             + ++N NG VVD+  L
Sbjct: 129 DDLIP-----------------VQVEYRESGEGG---------GMGIINNNGVVVDVAAL 162

Query: 184 GSLEDPYGEELRRRTEGISANEEALLGFLRDLGGQWCSRRKKRKIVDADLLGDTLPVGWK 243
            + EDP+G ELRRRTEG++  EE LLGFL  L GQW SRRKKRKIV+A   GD LP GWK
Sbjct: 163 ANAEDPFGPELRRRTEGLTTEEE-LLGFLTGLSGQWGSRRKKRKIVEASDFGDVLPQGWK 221

Query: 244 LLLGLKRREGRASVYCRRYISPGGQHFVSCKEVSGYLQSYFGLNDTNQSINPGGDEMQQ- 302
           LLL +KR+EGR  ++CRRYISP GQ FVSCKEVS  L S  GL D  Q      DE  Q 
Sbjct: 222 LLLSMKRKEGRVWLFCRRYISPNGQQFVSCKEVSSCLLSLSGLQDARQPNYGHNDENSQL 281

Query: 303 DYRVATDSLADIAQKENDQRQS-------------NQQDKEVTLLGIDNLAEVQVRDLFE 349
            ++++  + A +  K+++ +                  +K+ TLL + N  EV+V ++ +
Sbjct: 282 AHQISPGNAAGLTLKDDNSKDGLVCSSPSTVTTIPTHHEKQATLLNMGNSWEVKVGEILK 341

Query: 350 CHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRR 409
           CHKC MTFDEKD  L HL S H  T    +L SS+ + VI+K+GK+EC+FCH++FHE   
Sbjct: 342 CHKCAMTFDEKDDLLHHLSSSHNGTANSCKLSSSICNEVIMKEGKYECRFCHEIFHEENG 401

Query: 410 YNGHVGIHVRNYVRGIE--------EPHGRL---TLQKRTESPIRDEFPTRISKMDALIE 458
           YN HV IH +  V+  E         P   L   +++K T     D     ++       
Sbjct: 402 YNRHVEIHTKTSVKNAETSVLNSDPTPLDGLVSDSIEKTTNGQANDGMSFGLTHKTP--- 458

Query: 459 IAQNSILETSTGGPNNEPV----------DDAKFDTNMDELSDQQIIENMVTTEKMKKID 508
              +SI ET  G  NN             +D  F    DE  D+Q  +     +++ K+ 
Sbjct: 459 -KADSIKETHIGKSNNSFFHMGQHFEVTQNDGTF---ADESVDEQDKDCNTRNDRLGKVH 514

Query: 509 DAGCLMDVKVEACVDTGTSIPADEQNGCKSEASDGKDGLVFIAEEIDKSVIERESGAESC 568
           +A  ++  K  +  +   S   D       +AS+  + L    + I++     E  +ES 
Sbjct: 515 EAPDILAAKT-SLAEAALSTSEDRS---IQKASNESNVLKCPTDGINELCGSEERISESY 570

Query: 569 LLAPSINQNGCPVESNV 585
            +APS NQ  C VE NV
Sbjct: 571 SVAPSENQQTCEVEDNV 587

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066963|ref|XP_002302301.1| methyl binding domain protein [Populus trichocarpa] gi|222844027|gb|EEE81574.1| methyl binding domain protein [Populus trichocarpa]

 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 196/530 (36%), Positives = 288/530 (54%), Gaps = 80/530 (15%)

Query: 4   IDSLPFIDMTTLTQSELRALSLCSASAFDLNRLD--DVVIPAIDRSIFNESAGSRRQTFS 61
           I+SLP ID+  L+QSEL +LS CS+S   L R D  DV  P IDRS+FNESAGSR+QTFS
Sbjct: 19  IESLPLIDLRHLSQSELLSLSFCSSSPHRL-RTDTADVSTPKIDRSVFNESAGSRKQTFS 77

Query: 62  RPSGTATTHHHHHIRHRIPVLP--------------------------------PSSKHH 89
           R       ++     +  PV+P                                  ++H+
Sbjct: 78  RLRLAPRNNNASPSSNSTPVVPFQNTERQPLDEENSQIISLLKSLFGSDSNSIENKNEHY 137

Query: 90  HQVSSLP---------PHLDPDHLENRSI--------------IN-SLKQYLTQSPQFQD 125
           H++ S+P         P  +    +N SI              +N S+     +S   + 
Sbjct: 138 HKLVSIPVIYNDYMRLPSTNNAESQNVSIDIWDSSQGGLKRLEVNHSISIRTAESSSKKR 197

Query: 126 VVPFFGTRANDNDNDDDDKHVLMRKRKRGRKPKTKVKSLE-ENLVMVNKNGSVVDIVDLG 184
                    N N +++D+  ++  K         +V+S + E +VMVNKNG VVD   LG
Sbjct: 198 KRGRPRKNENVNFDNNDNSELVENKTIAVVCDNVEVESKKKEEMVMVNKNGVVVDFGALG 257

Query: 185 SLEDPYGEELRRRTEGISANEEALLGFLRDLGGQWCSRRKKRKIVDADLLGDTLPVGWKL 244
           ++EDPYGEELRRRTEG+    E  LGFL    G+W S RKKR+IVDA L GD LP+GWKL
Sbjct: 258 NMEDPYGEELRRRTEGMQLKAE-FLGFLEGFEGEWGSMRKKRRIVDASLFGDVLPIGWKL 316

Query: 245 LLGLKRREGRASVYCRRYISPGGQHFVSCKEVSGYLQSYFGLNDTNQSINPGGDEMQQDY 304
            + +K++ GR  + C RYISP GQ FVSCKEVS YL S+ GL+D ++ +N G      D 
Sbjct: 317 SICIKKQAGRVWLACTRYISPNGQQFVSCKEVSSYLLSFSGLHDVSR-LNFG----HMDG 371

Query: 305 RVA-TDSLADIAQKENDQRQSNQQDKEVTLLGIDNL----------AEVQVRDLFECHKC 353
           R+  TD ++     ++ ++    ++  ++ + +              EVQ+ + ++CHKC
Sbjct: 372 RIKLTDKISPSIPADHTRKDGKNENDFISYMALPVTCRSIEMGGCPVEVQMGNKYKCHKC 431

Query: 354 EMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGH 413
            + FD++D  LQHLLS HQR  ++ R G+S  + VIIK+GK+ECQFCHK+F ER R+NGH
Sbjct: 432 TVAFDKQDDLLQHLLS-HQRAPKQLRFGTSTNEEVIIKNGKYECQFCHKLFEERHRFNGH 490

Query: 414 VGIHVRNYVRGIEEPHGRLTLQKRTESPIRDEFPTRISKMDALIEIAQNS 463
           +G H++ Y++ ++  +G+ T    ++ P   + P    K+  LIE  ++S
Sbjct: 491 LGNHIKEYLKRLDASNGKTT--GESDEPALVKIPPGAGKIQTLIEFDRDS 538

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475668|ref|XP_002264947.2| PREDICTED: uncharacterized protein LOC100260704 [Vitis vinifera]

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 166/400 (41%), Positives = 236/400 (59%), Gaps = 48/400 (12%)

Query: 430 GRLTLQKRTESPIRDEFPTRISKMDALIEIAQNSILETSTGGPNNEP------------- 476
           GR ++QK  ESP RDE P+R SKMDALIEIAQ+SI ETS   P++EP             
Sbjct: 3   GRPSVQKTVESPSRDELPSRTSKMDALIEIAQSSIFETSAAAPSDEPNGVCTFGNPDVIS 62

Query: 477 -----------------------VDDAKFDTNMDELSDQQIIENMVTTEKMKKID---DA 510
                                  ++D+  +  +DE  DQQ  + ++  E  +KI+   DA
Sbjct: 63  TPEVPTADSEHEQNLGFCLGEPEMEDSITNRTLDEELDQQEGDCVMADENTEKINGDSDA 122

Query: 511 GCLMDVKVEACVDTGTSIPADEQNGCKSEASDGKDGLVFIAEEIDKSVIERESGAESCLL 570
            C   +K++ C+DT T++  +++NGC SE+ DGK G+ F   E++KS  E+ S  E+ LL
Sbjct: 123 AC---IKMDCCLDTTTTLSTNDKNGCSSESFDGKYGVSFSNNEVEKSGFEQRS-PETHLL 178

Query: 571 APSINQNGCPVESNVNLGCLNTVEPGEPDEVNNNKNIRVEACSGSSNVEPADEKLSAAVE 630
            PS NQ    VE+N+N    +  E  +P  V   +N  +    GSS++   ++  +  + 
Sbjct: 179 TPSSNQTVFDVENNMN----DISEQSKPGGVEEYENSGLTRGYGSSDIGRDNDVATMTMS 234

Query: 631 ENLKENLLQYGVSETSMSLLEPSHGFPTTNAVSNKVEDEAHRIEQRHPNVTGFDDLRLDE 690
           +  ++N+ Q  VS++SM L+ P H FPT NA+S+K EDE   ++Q+  N TGF++L+LDE
Sbjct: 235 QTPEDNVYQNRVSDSSMPLVHPLHSFPTYNAISDKGEDEFCCVDQKLQNTTGFEELKLDE 294

Query: 691 IENMKFSFGTGQESGPLPEAPIQMSNNAGMDGSYGSSTQVE-SEVLLNSTSRHHLTTLCV 749
           IE++KF F T Q    LPE  + + N A M+  + SS   E  EV+L+ T RH LTT CV
Sbjct: 295 IESLKFGFVTEQGPLSLPEVHMGLENGATMEDGFDSSIGFEPEEVMLSMTGRHQLTTACV 354

Query: 750 WCGMEFSHEVVDSEMQPDSVGYMCPTCKAKISGQLGGLGS 789
           WC +EFSHE V+SEMQ DSVG+MCPTCK+KISGQL  L S
Sbjct: 355 WCRVEFSHEAVESEMQSDSVGFMCPTCKSKISGQLNVLDS 394

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	790
TAIR|locus:2196526	524	MBD8 "methyl-CPG-binding domai	0.210	0.316	0.4	1.6e-30

TAIR|locus:2196526 MBD8 "methyl-CPG-binding domain 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
 Identities = 70/175 (40%), Positives = 93/175 (53%)

Query:   165 EENLV-MVNKNGSVVDIVDLGSL-EDPYGEELRRRTEGISANEEALLGFLRDLGGQWCSR 222
             EE +V + N+ G++VD+  L S+ EDPY EELRR T G+   EE +LGFL  L G+W + 
Sbjct:   270 EELVVNLENREGTIVDLSALASVSEDPYEEELRRITVGLKTKEE-ILGFLEQLNGEWVNI 328

Query:   223 RKKRKIVDADLLGDTLPVGWXXXXXXXXXXXXASVYCRRYISPGGQHFVSCKEVSGYLQS 282
              KK+K+V+A   G  LP GW              + CRRYISP GQ F +CKEVS YL+S
Sbjct:   329 GKKKKVVNACDYGGYLPRGWRLMLYIKRKGSNLLLACRRYISPDGQQFETCKEVSTYLRS 388

Query:   283 YFGLNDTNQSINPGGDE--MQQDYRVATDSL---ADIAQKENDQR-QSNQQDKEV 331
                    NQ      D   + Q   +A +SL   +D    E  Q  +S +   EV
Sbjct:   389 LLESPSKNQHYYLQSDNKTLGQQPVIANESLLGNSDSMDSETMQYLESGRTSSEV 443

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA;IDA

GO:0008150 "biological_process" evidence=ND

GO:0008327 "methyl-CpG binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	790
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.32
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.01
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.71
KOG3576	267	consensus Ovo and related transcription factors [T	98.68
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.64
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.37
PHA02768	55	hypothetical protein; Provisional	98.25
PHA00733	128	hypothetical protein	97.95
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	97.62
KOG3993	500	consensus Transcription factor (contains Zn finger	97.59
PHA00732	79	hypothetical protein	97.58
KOG3576	267	consensus Ovo and related transcription factors [T	97.35
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.23
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.17
PHA02768	55	hypothetical protein; Provisional	97.01
KOG3608	467	consensus Zn finger proteins [General function pre	97.0
PHA00733	128	hypothetical protein	96.95
KOG3608	467	consensus Zn finger proteins [General function pre	96.94
PHA00616	44	hypothetical protein	96.89
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.85
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.59
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.43
PLN03086	567	PRLI-interacting factor K; Provisional	96.05
PF01352	41	KRAB: KRAB box; InterPro: IPR001909 The Krueppel-a	95.94
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	95.84
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	95.83
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	95.56
PHA00616	44	hypothetical protein	95.31
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	95.06
smart00355	26	ZnF_C2H2 zinc finger.	94.57
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	93.9
PLN03086	567	PRLI-interacting factor K; Provisional	93.33
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	92.96
KOG3993	500	consensus Transcription factor (contains Zn finger	92.81
PHA00732	79	hypothetical protein	92.41
smart00355	26	ZnF_C2H2 zinc finger.	91.85
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	90.18
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	89.06
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	88.65
PRK04860	160	hypothetical protein; Provisional	87.72
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	87.03
KOG1146	1406	consensus Homeobox protein [General function predi	85.97
PF02178	13	AT_hook: AT hook motif; InterPro: IPR017956 AT hoo	85.08
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	82.84
smart00384	26	AT_hook DNA binding domain with preference for A/T	82.8
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	82.44
KOG2893	341	consensus Zn finger protein [General function pred	81.6

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.32  E-value=7.4e-13  Score=138.99  Aligned_cols=109  Identities=17%  Similarity=0.314  Sum_probs=89.8

Q ss_pred             CcccccccccccccccccCCCCCCCCCCCCCCCccccccccCCcchhhhcccccccccccccccccccccCCcccccCCc
Q 003869          267 GQHFVSCKEVSGYLQSYFGLNDTNQSINPGGDEMQQDYRVATDSLADIAQKENDQRQSNQQDKEVTLLGIDNLAEVQVRD  346 (790)
Q Consensus       267 Gqqf~TCkE~SSyf~SLlGl~e~k~t~~~~~~~vqq~~~~ss~g~a~~~~~~~~q~~s~~~~k~vt~~~~~nl~~~q~EK  346 (790)
                      ...-+.|.+|++.+.-..||..++++.=.                                              ....+
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~----------------------------------------------~~s~k  160 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRS----------------------------------------------LDSKK  160 (279)
T ss_pred             cCCceeccccccccccccccchhhccccc----------------------------------------------ccccc
Confidence            34445888888888888888877764100                                              00136


Q ss_pred             ccccCCCCcccCChhHHHHHHHhhhccc------CccccCCCCCCccccccCC--cccCCcCccccCCchhhhhhccccc
Q 003869          347 LFECHKCEMTFDEKDTYLQHLLSFHQRT------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l~~H~r~------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      .+.|++|+|.|.....|+.|++ +|.-.      +|.|.+..-|+.|+|+|||  ||.|.+|+|+|..+++|+.||+||.
T Consensus       161 a~~C~~C~K~YvSmpALkMHir-TH~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS  239 (279)
T KOG2462|consen  161 AFSCKYCGKVYVSMPALKMHIR-THTLPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHS  239 (279)
T ss_pred             cccCCCCCceeeehHHHhhHhh-ccCCCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhc
Confidence            7999999999999999999999 88743      7999999999999999998  9999999999999999999999997


Q ss_pred             cCcc
Q 003869          419 RNYV  422 (790)
Q Consensus       419 gE~~  422 (790)
                      +.+.
T Consensus       240 ~~K~  243 (279)
T KOG2462|consen  240 DVKK  243 (279)
T ss_pred             CCcc
Confidence            6554

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.01  E-value=1.3e-10  Score=122.37  Aligned_cols=80  Identities=16%  Similarity=0.314  Sum_probs=71.9

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhccc-----------CccccCCCCCCccccccCCcccCCcCccccCCchhhhhh
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQRT-----------TRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGH  413 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~-----------hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH  413 (790)
                      ...|+|+.|||.|...++|.+|+. +|...           +|.|..-..|+.|+|+|+-|++|.+|||.|.+..-|+.|
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ-~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~l~c~C~iCGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQ-THRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHTLPCECGICGKAFSRPWLLQGH  206 (279)
T ss_pred             CCceeccccccccccccccchhhc-ccccccccccccCCCCCceeeehHHHhhHhhccCCCcccccccccccchHHhhcc
Confidence            456999999999999999999987 77643           577777888999999999999999999999999999999


Q ss_pred             ccccccCcccCc
Q 003869          414 VGIHVRNYVRGI  425 (790)
Q Consensus       414 ~RtHtgE~~~~~  425 (790)
                      +|+||||+.-.+
T Consensus       207 iRTHTGEKPF~C  218 (279)
T KOG2462|consen  207 IRTHTGEKPFSC  218 (279)
T ss_pred             cccccCCCCccC
Confidence            999999987444

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.71  E-value=2.1e-09  Score=125.67  Aligned_cols=44  Identities=18%  Similarity=0.428  Sum_probs=39.6

Q ss_pred             ccCCCCCCccccccCC--cccCCcCccccCCchhhhhhccccccCc
Q 003869          378 YRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       378 F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      ..+++.|+.|.|+|+|  ||+|++||++|+.+.+|+.|+.+|.-..
T Consensus       615 lSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p  660 (958)
T KOG1074|consen  615 LSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKP  660 (958)
T ss_pred             ccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCc
Confidence            4457899999999999  9999999999999999999999996443

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.68  E-value=1.5e-08  Score=102.83  Aligned_cols=72  Identities=22%  Similarity=0.516  Sum_probs=64.9

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC--cccCCcCccccCCchhhhhhc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHV  414 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~  414 (790)
                      ...|.|.+|+|.|....-|.+|++ .|...        +|.|.....|++|+|+|+|  ||+|..|+|+|+++..|..|+
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~k-ch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLK-CHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhh-hccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            467999999999999999999986 66533        7999999999999999999  999999999999999999997


Q ss_pred             c-cc
Q 003869          415 G-IH  417 (790)
Q Consensus       415 R-tH  417 (790)
                      + +|
T Consensus       194 ~kvh  197 (267)
T KOG3576|consen  194 KKVH  197 (267)
T ss_pred             HHHc
Confidence            5 44

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.64  E-value=4.2e-09  Score=121.40  Aligned_cols=70  Identities=19%  Similarity=0.558  Sum_probs=65.8

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC--cccCCcCccccCCchhhhhhc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHV  414 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~  414 (790)
                      +..|.|+.|+|.|...++|.+|.- .|.+.        .|+|+++.+|..|+|.|.|  ||+|..|+|+|++.+.+..||
T Consensus       892 ~gmyaCDqCDK~FqKqSSLaRHKY-EHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  892 DGMYACDQCDKAFQKQSSLARHKY-EHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             cccchHHHHHHHHHhhHHHHHhhh-hhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhh
Confidence            578999999999999999999987 78876        4899999999999999998  999999999999999999998


Q ss_pred             c
Q 003869          415 G  415 (790)
Q Consensus       415 R  415 (790)
                      .
T Consensus       971 N  971 (1007)
T KOG3623|consen  971 N  971 (1007)
T ss_pred             c
Confidence            5

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.37  E-value=1e-07  Score=110.31  Aligned_cols=71  Identities=24%  Similarity=0.569  Sum_probs=63.7

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhccc---------------------CccccCCCCCCccccccCC--cccCCcCc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQRT---------------------TRRYRLGSSVGDGVIIKDG--KFECQFCH  401 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~---------------------hK~F~~sssLk~H~RtHtG--PYkC~~CG  401 (790)
                      +..|.|..|..+|..+..|.+|+. .|...                     +|+|+.+.+|+.|+|+|.|  ||+|+.|+
T Consensus       238 e~nfsC~lCsytFAyRtQLErhm~-~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCk  316 (1007)
T KOG3623|consen  238 EPNFSCMLCSYTFAYRTQLERHMQ-LHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCK  316 (1007)
T ss_pred             CCCCcchhhhhhhhhHHHHHHHHH-hhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccc
Confidence            567999999999999999999996 55422                     5889999999999999998  99999999


Q ss_pred             cccCCchhhhhhccc
Q 003869          402 KVFHERRRYNGHVGI  416 (790)
Q Consensus       402 KsFs~ks~L~rH~Rt  416 (790)
                      |+|++.+.+..||-.
T Consensus       317 KRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  317 KRFSHSGSYSSHMSS  331 (1007)
T ss_pred             cccccCCcccccccc
Confidence            999999999999854

>PHA02768 hypothetical protein; Provisional

Probab=98.25  E-value=5.4e-07  Score=74.61  Aligned_cols=45  Identities=16%  Similarity=0.405  Sum_probs=40.1

Q ss_pred             ccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhh
Q 003869          347 LFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNG  412 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~r  412 (790)
                      .|+|+.||+.|...++|..|++                     +|++||+|..|+|.|.+.+.|..
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r---------------------~H~k~~kc~~C~k~f~~~s~l~~   49 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLR---------------------KHNTNLKLSNCKRISLRTGEYIE   49 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHH---------------------hcCCcccCCcccceecccceeEE
Confidence            4899999999999999999988                     46679999999999999888753

>PHA00733 hypothetical protein

Probab=97.95  E-value=6.5e-06  Score=79.19  Aligned_cols=54  Identities=22%  Similarity=0.370  Sum_probs=45.6

Q ss_pred             CCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhccccc
Q 003869          344 VRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       344 ~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      ..+||.|+.|++.|....+|.+|++                     .|+.+|.|..|+|.|.....|.+|++.++
T Consensus        70 ~~kPy~C~~Cgk~Fss~s~L~~H~r---------------------~h~~~~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         70 AVSPYVCPLCLMPFSSSVSLKQHIR---------------------YTEHSKVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             CCCCccCCCCCCcCCCHHHHHHHHh---------------------cCCcCccCCCCCCccCCHHHHHHHHHHhc
Confidence            3588999999999999999988876                     23347999999999999999999987654

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=97.62  E-value=0.00012  Score=86.93  Aligned_cols=78  Identities=18%  Similarity=0.376  Sum_probs=69.2

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC------cccCC---cCccccCCc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG------KFECQ---FCHKVFHER  407 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG------PYkC~---~CGKsFs~k  407 (790)
                      -.|-+|-+|-+....++.|+.|.+ .|+++        +++|..+.+|+.||-+|.-      +|.|+   +|.+.|...
T Consensus       603 TdPNqCiiC~rVlSC~saLqmHyr-tHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~  681 (958)
T KOG1074|consen  603 TDPNQCIICLRVLSCPSALQMHYR-THTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNA  681 (958)
T ss_pred             CCccceeeeeecccchhhhhhhhh-cccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccc
Confidence            457899999999999999999999 89887        6889999999999998883      79999   999999999


Q ss_pred             hhhhhhccccccCccc
Q 003869          408 RRYNGHVGIHVRNYVR  423 (790)
Q Consensus       408 s~L~rH~RtHtgE~~~  423 (790)
                      -.|..|+|+|.+....
T Consensus       682 V~lpQhIriH~~~~~s  697 (958)
T KOG1074|consen  682 VTLPQHIRIHLGGQIS  697 (958)
T ss_pred             ccccceEEeecCCCCC
Confidence            9999999999866553

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.59  E-value=1.2e-05  Score=89.37  Aligned_cols=102  Identities=19%  Similarity=0.272  Sum_probs=72.5

Q ss_pred             ccccccccccccccccccccCCcccccCCcccccCCCCcccCChhHHHHHHHhhhccc---Cc--------cccCCCCCC
Q 003869          317 KENDQRQSNQQDKEVTLLGIDNLAEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT---TR--------RYRLGSSVG  385 (790)
Q Consensus       317 ~~~~q~~s~~~~k~vt~~~~~nl~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~---hK--------~F~~sssLk  385 (790)
                      ..-.|....+|.....+..|.+.+-+..  -|+|++|+|.|+...||..|.+ .|.-.   .+        .-....-.+
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~v--EYrCPEC~KVFsCPANLASHRR-WHKPR~eaa~a~~~P~k~~~~~rae~~  343 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHV--EYRCPECDKVFSCPANLASHRR-WHKPRPEAAKAGSPPPKQAVETRAEVQ  343 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEe--eecCCcccccccCchhhhhhhc-ccCCchhhhhcCCCChhhhhhhhhhhh
Confidence            4455667778877788888888888776  4999999999999999999977 66533   11        000000011


Q ss_pred             ccccc----cCCcccCCcCccccCCchhhhhhccccccCc
Q 003869          386 DGVII----KDGKFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       386 ~H~Rt----HtGPYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      .-.|.    -.|-|.|.+|+|.|.+...|++|+-+|....
T Consensus       344 ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~  383 (500)
T KOG3993|consen  344 EAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAP  383 (500)
T ss_pred             hccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccc
Confidence            11111    1138999999999999999999999987443

>PHA00732 hypothetical protein

Probab=97.58  E-value=4.9e-05  Score=67.58  Aligned_cols=48  Identities=27%  Similarity=0.449  Sum_probs=39.5

Q ss_pred             ccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhccccc
Q 003869          347 LFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      ||.|..|++.|.+..+|..|++..|                     .++.|+.|+++|.   .|..|.+++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H---------------------~~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNH---------------------TLTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhccc---------------------CCCccCCCCCEeC---ChhhhhcccC
Confidence            6899999999999999999976212                     2578999999998   5888887654

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=97.35  E-value=3.5e-05  Score=78.86  Aligned_cols=79  Identities=16%  Similarity=0.238  Sum_probs=67.1

Q ss_pred             cccccCCcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC-------------cccC
Q 003869          339 LAEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG-------------KFEC  397 (790)
Q Consensus       339 l~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG-------------PYkC  397 (790)
                      +.-|...|.|-|..|||.|.+...|++|++ .|++.        .|.|.+..+|..|++.-+|             -|.|
T Consensus       137 ~kch~~vkr~lct~cgkgfndtfdlkrh~r-thtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vc  215 (267)
T KOG3576|consen  137 LKCHSDVKRHLCTFCGKGFNDTFDLKRHTR-THTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVC  215 (267)
T ss_pred             hhhccHHHHHHHhhccCcccchhhhhhhhc-cccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeee
Confidence            344555788999999999999999999999 89887        5899999999998754332             6899


Q ss_pred             CcCccccCCchhhhhhccccc
Q 003869          398 QFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       398 ~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      ..||.+-.+...+..|++.|+
T Consensus       216 edcg~t~~~~e~~~~h~~~~h  236 (267)
T KOG3576|consen  216 EDCGYTSERPEVYYLHLKLHH  236 (267)
T ss_pred             cccCCCCCChhHHHHHHHhcC
Confidence            999999999999999999886

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.23  E-value=3.6e-05  Score=54.39  Aligned_cols=23  Identities=22%  Similarity=0.681  Sum_probs=19.4

Q ss_pred             CCccccccCC--cccCCcCccccCC
Q 003869          384 VGDGVIIKDG--KFECQFCHKVFHE  406 (790)
Q Consensus       384 Lk~H~RtHtG--PYkC~~CGKsFs~  406 (790)
                      |.+|+++|++  ||.|+.|+|+|.+
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            5567778887  9999999999974

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.17  E-value=0.00018  Score=77.66  Aligned_cols=69  Identities=19%  Similarity=0.351  Sum_probs=48.2

Q ss_pred             CcccccCC--CCcccCChhHHHHHHHhhhcccCccccCCCCCCccc--cccCCcccCCcCccccCCchhhhhhcc
Q 003869          345 RDLFECHK--CEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGV--IIKDGKFECQFCHKVFHERRRYNGHVG  415 (790)
Q Consensus       345 EKPyeC~~--CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~--RtHtGPYkC~~CGKsFs~ks~L~rH~R  415 (790)
                      +|||+|++  |.|+|+....|+.|++--|... +.-... .-..|.  ....+||+|.+|+|+|.-...|+-|.+
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~-~~~~~p-~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQ-KLHENP-SPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCc-ccCCCC-CccccccccccCCceeccccchhhccCccceeccc
Confidence            69999998  9999999999999998445322 000000 001111  123359999999999999999998864

>PHA02768 hypothetical protein; Provisional

Probab=97.01  E-value=0.0003  Score=58.57  Aligned_cols=25  Identities=24%  Similarity=0.667  Sum_probs=24.1

Q ss_pred             cccCCcCccccCCchhhhhhccccc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      -|+|+.|||.|++.++|.+|+|+|+
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~   29 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN   29 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC
Confidence            4899999999999999999999999

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=97.00  E-value=0.00012  Score=80.01  Aligned_cols=154  Identities=13%  Similarity=0.202  Sum_probs=95.0

Q ss_pred             ccccCCCCcccccccccccccccccCCCCCCCCCCCCCCCccccccccCCcchhhhcccccccc---cccccccc-----
Q 003869          260 RRYISPGGQHFVSCKEVSGYLQSYFGLNDTNQSINPGGDEMQQDYRVATDSLADIAQKENDQRQ---SNQQDKEV-----  331 (790)
Q Consensus       260 R~~iSPkGqqf~TCkE~SSyf~SLlGl~e~k~t~~~~~~~vqq~~~~ss~g~a~~~~~~~~q~~---s~~~~k~v-----  331 (790)
                      ++.+.+++.+...|..|+..|..--.+.++-.-   .+...++...++.+.....+..+-....   ...|..+.     
T Consensus       197 eH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rR---qt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc  273 (467)
T KOG3608|consen  197 EHIRTHSNEKVVACPHCGELFRTKTKLFDHLRR---QTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTC  273 (467)
T ss_pred             HHHHhcCCCeEEecchHHHHhccccHHHHHHHh---hhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCC
Confidence            777788888888888888777765444443211   1112222333333332222222111111   01111111     


Q ss_pred             ----cccccCCcccccCCcccccCCCCcccCChhHHHHHHHhhhccc---------CccccCCCCCCccccccC-C----
Q 003869          332 ----TLLGIDNLAEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT---------TRRYRLGSSVGDGVIIKD-G----  393 (790)
Q Consensus       332 ----t~~~~~nl~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~---------hK~F~~sssLk~H~RtHt-G----  393 (790)
                          ++..+-. ..|...|||+|+.|.+.|...+.|.+|.. .|...         +-.|+....+++|++.+. |    
T Consensus       274 ~~~ssL~~H~r-~rHs~dkpfKCd~Cd~~c~~esdL~kH~~-~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~  351 (467)
T KOG3608|consen  274 SSASSLTTHIR-YRHSKDKPFKCDECDTRCVRESDLAKHVQ-VHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPI  351 (467)
T ss_pred             CChHHHHHHHH-hhhccCCCccccchhhhhccHHHHHHHHH-hccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCC
Confidence                1111111 22334799999999999999999999987 77744         345667778899987766 5    


Q ss_pred             cccCCcCccccCCchhhhhhccccc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      +|.|-.|.|.|++-.+|.+|++..+
T Consensus       352 ~Y~CH~Cdr~ft~G~~L~~HL~kkH  376 (467)
T KOG3608|consen  352 LYACHCCDRFFTSGKSLSAHLMKKH  376 (467)
T ss_pred             ceeeecchhhhccchhHHHHHHHhh
Confidence            8999999999999999999976443

>PHA00733 hypothetical protein

Probab=96.95  E-value=0.00025  Score=68.40  Aligned_cols=59  Identities=8%  Similarity=0.070  Sum_probs=48.4

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC-cccCCcCccccCCchhhhhhccccc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG-KFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG-PYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      .+++.|.+|.+.|.....|..|.-               |.+|+..|.. ||.|+.|++.|.....|..|+++|.
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~---------------l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~   97 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSY---------------LYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTE   97 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHH---------------HHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCC
Confidence            478999999999999888877632               3345555555 9999999999999999999999774

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=96.94  E-value=0.00012  Score=79.95  Aligned_cols=71  Identities=20%  Similarity=0.372  Sum_probs=36.2

Q ss_pred             ccccCCCCcccCChhHHHHHHHhhhcccC------ccccCCCCCCccccccC-C--cccCCcCccccCCchhhhhhcccc
Q 003869          347 LFECHKCEMTFDEKDTYLQHLLSFHQRTT------RRYRLGSSVGDGVIIKD-G--KFECQFCHKVFHERRRYNGHVGIH  417 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l~~H~r~h------K~F~~sssLk~H~RtHt-G--PYkC~~CGKsFs~ks~L~rH~RtH  417 (790)
                      +|+|..|.|.|.....|+.|+. .|...-      -.....++|..|+|... +  ||+|..|.+.|.+.+.|.+|..+|
T Consensus       237 ~fqC~~C~KrFaTeklL~~Hv~-rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~H  315 (467)
T KOG3608|consen  237 SFQCAQCFKRFATEKLLKSHVV-RHVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVH  315 (467)
T ss_pred             chHHHHHHHHHhHHHHHHHHHH-HhhhcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhc
Confidence            4555555555555555555544 343321      12333455555554322 2  666666666666666666665555


Q ss_pred             c
Q 003869          418 V  418 (790)
Q Consensus       418 t  418 (790)
                      .
T Consensus       316 S  316 (467)
T KOG3608|consen  316 S  316 (467)
T ss_pred             c
Confidence            4

>PHA00616 hypothetical protein

Probab=96.89  E-value=0.00023  Score=56.67  Aligned_cols=29  Identities=14%  Similarity=0.369  Sum_probs=27.2

Q ss_pred             cccCCcCccccCCchhhhhhccccccCcc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ||+|..||+.|..++.|.+|++.|+|+..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~   29 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNK   29 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCc
Confidence            79999999999999999999999998754

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.85  E-value=0.00035  Score=61.93  Aligned_cols=70  Identities=23%  Similarity=0.410  Sum_probs=22.2

Q ss_pred             ccCCCCcccCChhHHHHHHHhhhccc---CccccCCCCCCccccccCC-cccCCcCccccCCchhhhhhccccc
Q 003869          349 ECHKCEMTFDEKDTYLQHLLSFHQRT---TRRYRLGSSVGDGVIIKDG-KFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       349 eC~~CgKtF~~kSsLkrH~l~~H~r~---hK~F~~sssLk~H~RtHtG-PYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      +|..|+..|.....|..|+...|.-.   -+.+.....+..+.+.... .+.|..|++.|.....|..|++.+.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            59999999999999999997667533   1122233344444443333 6999999999999999999999763

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.59  E-value=0.00049  Score=46.56  Aligned_cols=23  Identities=26%  Similarity=0.735  Sum_probs=21.7

Q ss_pred             ccCCcCccccCCchhhhhhcccc
Q 003869          395 FECQFCHKVFHERRRYNGHVGIH  417 (790)
Q Consensus       395 YkC~~CGKsFs~ks~L~rH~RtH  417 (790)
                      |.|+.|++.|..+..|.+|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.43  E-value=0.0026  Score=52.29  Aligned_cols=52  Identities=15%  Similarity=0.301  Sum_probs=40.5

Q ss_pred             ccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhccccc
Q 003869          347 LFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      .|.|++|++ ..+...|..|....|...                 .+.+.|++|...+.  .+|.+|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~-----------------~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSE-----------------SKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCC-----------------CCCccCCCchhhhh--hHHHHHHHHhc
Confidence            489999999 566789999987555522                 12789999998766  49999998765

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PLN03086 PRLI-interacting factor K; Provisional

Probab=96.05  E-value=0.0035  Score=73.53  Aligned_cols=71  Identities=18%  Similarity=0.353  Sum_probs=53.6

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhccc----CccccCCCCCCccccccCC--cccCCcCccccCC----------ch
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQRT----TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHE----------RR  408 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~----hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~----------ks  408 (790)
                      ++.+.|++|++.|. ...|..|+...|...    ++ +..+..|..|+++|..  |+.|++|++.|..          ..
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~Hkpv~CpCg~-~~~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s  528 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFHEPLQCPCGV-VLEKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLR  528 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcCCCccCCCCC-CcchhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhh
Confidence            57789999999996 688999998434211    22 2245678889888886  9999999999952          34


Q ss_pred             hhhhhcccc
Q 003869          409 RYNGHVGIH  417 (790)
Q Consensus       409 ~L~rH~RtH  417 (790)
                      .|..|..++
T Consensus       529 ~Lt~HE~~C  537 (567)
T PLN03086        529 GMSEHESIC  537 (567)
T ss_pred             hHHHHHHhc
Confidence            788898876

>PF01352 KRAB: KRAB box; InterPro: IPR001909 The Krueppel-associated box (KRAB) is a domain of around 75 amino acids that is found in the N-terminal part of about one third of eukaryotic Krueppel-type C2H2 zinc finger proteins (ZFPs) []

Probab=95.94  E-value=0.0012  Score=51.80  Aligned_cols=29  Identities=24%  Similarity=0.184  Sum_probs=18.4

Q ss_pred             ecCCCeEEeeeccC-CCCCchHHHHhhhhc
Q 003869          171 VNKNGSVVDIVDLG-SLEDPYGEELRRRTE  199 (790)
Q Consensus       171 ~~~~gv~vd~~~~~-~~~dp~~~el~r~~~  199 (790)
                      |+|++|+|+|+.++ .++||.|++|||++|
T Consensus         1 Vtf~Dvav~fs~eEW~~L~~~Qk~ly~dvm   30 (41)
T PF01352_consen    1 VTFEDVAVYFSQEEWELLDPAQKNLYRDVM   30 (41)
T ss_dssp             ------TT---HHHHHTS-HHHHHHHHHHH
T ss_pred             CeEEEEEEEcChhhcccccceecccchhHH
Confidence            68999999999998 999999999999998

It is enriched in charged amino acids and can be divided into subregions A and B, which are predicted to fold into two amphipathic alpha-helices. The KRAB A and B boxes can be separated by variable spacer segments and many KRAB proteins contain only the A box []. The functions currently known for members of the KRAB-containing protein family include transcriptional repression of RNA polymerase I, II, and III promoters, binding and splicing of RNA, and control of nucleolus function. The KRAB domain functions as a transcriptional repressor when tethered to the template DNA by a DNA-binding domain. A sequence of 45 amino acids in the KRAB A subdomain has been shown to be necessary and sufficient for transcriptional repression. The B box does not repress by itself but does potentiate the repression exerted by the KRAB A subdomain [, ]. Gene silencing requires the binding of the KRAB domain to the RING-B box-coiled coil (RBCC) domain of the KAP-1/TIF1-beta corepressor. As KAP-1 binds to the heterochromatin proteins HP1, it has been proposed that the KRAB-ZFP-bound target gene could be silenced following recruitment to heterochromatin [, ]. KRAB-ZFPs probably constitute the single largest class of transcription factors within the human genome []. Although the function of KRAB-ZFPs is largely unknown, they appear to play important roles during cell differentiation and development. The KRAB domain is generally encoded by two exons. The regions coded by the two exons are known as KRAB-A and KRAB-B.; GO: 0003676 nucleic acid binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1V65_A.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=95.84  E-value=0.0032  Score=44.18  Aligned_cols=26  Identities=31%  Similarity=0.547  Sum_probs=24.2

Q ss_pred             cccCCcCccccCCchhhhhhcccccc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      ||+|..|++.|.....|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            79999999999999999999999863

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.83  E-value=0.0053  Score=41.43  Aligned_cols=21  Identities=24%  Similarity=0.687  Sum_probs=20.2

Q ss_pred             cccCCCCcccCChhHHHHHHH
Q 003869          348 FECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       348 yeC~~CgKtF~~kSsLkrH~l  368 (790)
                      |+|+.|++.|..+..|.+|++
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~   21 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMR   21 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHh
Confidence            789999999999999999998

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=95.56  E-value=0.0038  Score=41.62  Aligned_cols=24  Identities=29%  Similarity=0.740  Sum_probs=20.3

Q ss_pred             ccCCcCccccCCchhhhhhccccc
Q 003869          395 FECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       395 YkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      |.|++|++.|.....|..|+++|.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999998873

...

>PHA00616 hypothetical protein

Probab=95.31  E-value=0.0077  Score=48.14  Aligned_cols=22  Identities=32%  Similarity=0.869  Sum_probs=21.2

Q ss_pred             ccccCCCCcccCChhHHHHHHH
Q 003869          347 LFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ||+|..||+.|..++.|.+|++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r   22 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLL   22 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHH
Confidence            6999999999999999999998

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=95.06  E-value=0.017  Score=38.48  Aligned_cols=24  Identities=33%  Similarity=0.733  Sum_probs=19.4

Q ss_pred             cccCCCCcccCChhHHHHHHHhhh
Q 003869          348 FECHKCEMTFDEKDTYLQHLLSFH  371 (790)
Q Consensus       348 yeC~~CgKtF~~kSsLkrH~l~~H  371 (790)
                      |.|++|++.|.....|..|++..|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999998433

...

>smart00355 ZnF_C2H2 zinc finger

Probab=94.57  E-value=0.013  Score=39.37  Aligned_cols=24  Identities=29%  Similarity=0.716  Sum_probs=22.4

Q ss_pred             ccCCcCccccCCchhhhhhccccc
Q 003869          395 FECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       395 YkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      |+|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            689999999999999999999875

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=93.90  E-value=0.032  Score=39.10  Aligned_cols=24  Identities=33%  Similarity=0.616  Sum_probs=21.9

Q ss_pred             ccccCCCCcccCChhHHHHHHHhhh
Q 003869          347 LFECHKCEMTFDEKDTYLQHLLSFH  371 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l~~H  371 (790)
                      ||+|..|++.|.....|..|++ .|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~-~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKR-SH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHC-TT
T ss_pred             CCCCCccCCccCChhHHHHHhH-Hh
Confidence            6899999999999999999987 44

>PLN03086 PRLI-interacting factor K; Provisional

Probab=93.33  E-value=0.024  Score=66.76  Aligned_cols=71  Identities=13%  Similarity=0.314  Sum_probs=49.7

Q ss_pred             ccCC--CCcccCChhHHHHHHHhhhccc-CccccCCCCCCccccccCCcccCCcCccccCCchhhhhhccccccCcccCc
Q 003869          349 ECHK--CEMTFDEKDTYLQHLLSFHQRT-TRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNYVRGI  425 (790)
Q Consensus       349 eC~~--CgKtF~~kSsLkrH~l~~H~r~-hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHtgE~~~~~  425 (790)
                      .|+.  |+..| .+..+..|.   |... ++.|. ...|..|+++|+.||.|+ ||+.| .+..|..|+++|..+....+
T Consensus       435 ~Cp~~~Cg~v~-~r~el~~H~---~C~~Cgk~f~-~s~LekH~~~~Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C  507 (567)
T PLN03086        435 VCPHDGCGIVL-RVEEAKNHV---HCEKCGQAFQ-QGEMEKHMKVFHEPLQCP-CGVVL-EKEQMVQHQASTCPLRLITC  507 (567)
T ss_pred             eCCccccccee-eccccccCc---cCCCCCCccc-hHHHHHHHHhcCCCccCC-CCCCc-chhHHHhhhhccCCCCceeC
Confidence            4653  77776 344455552   2222 56675 577899999988899999 99866 56899999999987665444


Q ss_pred             C
Q 003869          426 E  426 (790)
Q Consensus       426 ~  426 (790)
                      .
T Consensus       508 ~  508 (567)
T PLN03086        508 R  508 (567)
T ss_pred             C
Confidence            3

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=92.96  E-value=0.042  Score=38.87  Aligned_cols=20  Identities=15%  Similarity=0.441  Sum_probs=16.9

Q ss_pred             ccccCCcccccCCCCcccCC
Q 003869          340 AEVQVRDLFECHKCEMTFDE  359 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~  359 (790)
                      ..|.++|||+|++|++.|..
T Consensus         7 ~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    7 RTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHSSSSSEEESSSSEEESS
T ss_pred             hhcCCCCCCCCCCCcCeeCc
Confidence            34678899999999999963

...

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=92.81  E-value=0.025  Score=63.76  Aligned_cols=54  Identities=24%  Similarity=0.461  Sum_probs=45.5

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhccccc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      .-|.|..|...|-+...|.+|..   .+                +-.--|+|+.|+|.|+-..+|..|.|-|.
T Consensus       266 GdyiCqLCK~kYeD~F~LAQHrC---~R----------------IV~vEYrCPEC~KVFsCPANLASHRRWHK  319 (500)
T KOG3993|consen  266 GDYICQLCKEKYEDAFALAQHRC---PR----------------IVHVEYRCPECDKVFSCPANLASHRRWHK  319 (500)
T ss_pred             HHHHHHHHHHhhhhHHHHhhccC---Ce----------------eEEeeecCCcccccccCchhhhhhhcccC
Confidence            35999999999999999999954   11                11126999999999999999999999996

>PHA00732 hypothetical protein

Probab=92.41  E-value=0.08  Score=47.29  Aligned_cols=29  Identities=17%  Similarity=0.230  Sum_probs=25.0

Q ss_pred             cccCCcCccccCCchhhhhhcc-ccccCcc
Q 003869          394 KFECQFCHKVFHERRRYNGHVG-IHVRNYV  422 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~R-tHtgE~~  422 (790)
                      ||.|..|++.|.+...|.+|++ .|++...
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~~~C   30 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTLTKC   30 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCCCcc
Confidence            7999999999999999999998 4765433

>smart00355 ZnF_C2H2 zinc finger

Probab=91.85  E-value=0.13  Score=34.33  Aligned_cols=24  Identities=25%  Similarity=0.672  Sum_probs=21.6

Q ss_pred             cccCCCCcccCChhHHHHHHHhhhc
Q 003869          348 FECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       348 yeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      |+|..|++.|.....|..|++ .|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~-~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMR-THX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHH-Hhc
Confidence            689999999999999999988 664

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=90.18  E-value=0.13  Score=42.52  Aligned_cols=27  Identities=22%  Similarity=0.458  Sum_probs=20.7

Q ss_pred             cccCCcCccccCCchhhhhhccccccC
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      |..|++|+..+.+..+|++|+.++++.
T Consensus        24 PatCP~C~a~~~~srnLrRHle~~H~~   50 (54)
T PF09237_consen   24 PATCPICGAVIRQSRNLRRHLEIRHFK   50 (54)
T ss_dssp             -EE-TTT--EESSHHHHHHHHHHHTTT
T ss_pred             CCCCCcchhhccchhhHHHHHHHHhcc
Confidence            999999999999999999999877643

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=89.06  E-value=0.13  Score=35.38  Aligned_cols=23  Identities=26%  Similarity=0.652  Sum_probs=21.4

Q ss_pred             ccCCcCccccCCchhhhhhcccc
Q 003869          395 FECQFCHKVFHERRRYNGHVGIH  417 (790)
Q Consensus       395 YkC~~CGKsFs~ks~L~rH~RtH  417 (790)
                      |.|..|.+.|.....|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999865

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=88.65  E-value=0.37  Score=39.93  Aligned_cols=31  Identities=19%  Similarity=0.251  Sum_probs=21.9

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      .+.+.|..|++|+..+.+..+|++|+...|.
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhc
Confidence            3446899999999999999999999975665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=87.72  E-value=0.3  Score=49.11  Aligned_cols=38  Identities=18%  Similarity=0.455  Sum_probs=29.8

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcCccccCCch
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERR  408 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks  408 (790)
                      -+|.|. |++   ...++.+|.+                     +|++  +|.|..|++.|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~r---------------------i~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNR---------------------VVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHH---------------------HhcCCccEECCCCCceeEEec
Confidence            479998 998   6667777766                     4555  899999999997654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=87.03  E-value=0.3  Score=34.55  Aligned_cols=23  Identities=26%  Similarity=0.619  Sum_probs=21.3

Q ss_pred             ccCCcCccccCCchhhhhhcccc
Q 003869          395 FECQFCHKVFHERRRYNGHVGIH  417 (790)
Q Consensus       395 YkC~~CGKsFs~ks~L~rH~RtH  417 (790)
                      |.|..|++.|.....|..|++.+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCcccCCCCcCCHHHHHHHHccC
Confidence            78999999999999999999864

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=85.97  E-value=0.3  Score=61.85  Aligned_cols=70  Identities=17%  Similarity=0.319  Sum_probs=51.8

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccC-------C-cccCCcCccccCCchhhhhhccc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKD-------G-KFECQFCHKVFHERRRYNGHVGI  416 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHt-------G-PYkC~~CGKsFs~ks~L~rH~Rt  416 (790)
                      .|.|.|+.|+..|.....|..||+..|-...-+|.  ...+.|.+...       + ||.|..|..+|+.+..|.+|+..
T Consensus       463 ~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c--~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  463 FKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYC--KAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             cccccCCccchhhhhHHHhhhcccccccccchhHh--HhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            47899999999999999999999865543322221  22233333222       2 99999999999999999999864

>PF02178 AT_hook: AT hook motif; InterPro: IPR017956 AT hooks are DNA-binding motifs with a preference for A/T rich regions

Probab=85.08  E-value=0.31  Score=29.73  Aligned_cols=11  Identities=64%  Similarity=0.875  Sum_probs=4.4

Q ss_pred             hhhcCCCCCcc
Q 003869          150 KRKRGRKPKTK  160 (790)
Q Consensus       150 krkrgr~~~~~  160 (790)
                      +|+||||+|..
T Consensus         1 ~r~RGRP~k~~   11 (13)
T PF02178_consen    1 KRKRGRPRKNA   11 (13)
T ss_dssp             S--SS--TT--
T ss_pred             CCcCCCCcccc
Confidence            58999999874

These motifs are found in a variety of proteins, including the high mobility group (HMG) proteins [], in DNA-binding proteins from plants [] and in hBRG1 protein, a central ATPase of the human switching/sucrose non-fermenting (SWI/SNF) remodeling complex []. High mobility group (HMG) proteins are a family of relatively low molecular weight non-histone components in chromatin []. HMG-I and HMG-Y (HMGA) are proteins of about 100 amino acid residues which are produced by the alternative splicing of a single gene. HMG-I/Y proteins bind preferentially to the minor groove of AT-rich regions in double-stranded DNA in a non-sequence specific manner [, ]. It is suggested that these proteins could function in nucleosome phasing and in the 3' end processing of mRNA transcripts. They are also involved in the transcription regulation of genes containing, or in close proximity to, AT-rich regions. ; GO: 0003677 DNA binding; PDB: 2EZE_A 2EZD_A 2EZF_A 2EZG_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=82.84  E-value=0.78  Score=31.40  Aligned_cols=21  Identities=33%  Similarity=0.754  Sum_probs=19.8

Q ss_pred             cccCCCCcccCChhHHHHHHH
Q 003869          348 FECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       348 yeC~~CgKtF~~kSsLkrH~l  368 (790)
                      |.|..|++.|.....|..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            689999999999999999986

>smart00384 AT_hook DNA binding domain with preference for A/T rich regions

Probab=82.80  E-value=0.55  Score=33.70  Aligned_cols=12  Identities=58%  Similarity=0.753  Sum_probs=10.4

Q ss_pred             hhhcCCCCCccc
Q 003869          150 KRKRGRKPKTKV  161 (790)
Q Consensus       150 krkrgr~~~~~~  161 (790)
                      |||||||||.+.
T Consensus         1 kRkRGRPrK~~~   12 (26)
T smart00384        1 KRKRGRPRKAPK   12 (26)
T ss_pred             CCCCCCCCCCCC
Confidence            699999999864

Small DNA-binding motif first described in the high mobility group non-histone chromosomal protein HMG-I(Y).

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=82.44  E-value=0.39  Score=32.83  Aligned_cols=23  Identities=17%  Similarity=0.496  Sum_probs=18.7

Q ss_pred             ccCCcCccccCCchhhhhhccccc
Q 003869          395 FECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       395 YkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      |+|+.|.-... +..|.+|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999998888 889999999865

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=81.60  E-value=0.64  Score=49.36  Aligned_cols=49  Identities=27%  Similarity=0.596  Sum_probs=38.6

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhh-ccccc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGH-VGIHV  418 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH-~RtHt  418 (790)
                      || .|=+|++.|.+..-|.+|++.                       +.|+|.+|+|..-.-..|..| |.+|.
T Consensus        10 kp-wcwycnrefddekiliqhqka-----------------------khfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   10 KP-WCWYCNREFDDEKILIQHQKA-----------------------KHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             Cc-eeeecccccchhhhhhhhhhh-----------------------ccceeeeehhhhccCCCceeehhhhhh
Confidence            45 577999999999999999762                       247899999887777777777 56664

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	790
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-10

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 62.2 bits (150), Expect = 6e-10
 Identities = 104/703 (14%), Positives = 190/703 (27%), Gaps = 211/703 (30%)

Query: 70  HHHHHIRHRIPVLPPSSKHHHQVSSLPPHLDPDHLEN---RSIINSLKQYLTQSPQFQDV 126
           HHHHH+           +H +Q   +    +   ++N   + + +  K  L+        
Sbjct: 2   HHHHHMDFET------GEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILS-------- 47

Query: 127 VPFFGTRANDNDNDDDDKHVLMRKRKRGRKPKTKVKSLEENLVMVNKNGSVVDIVDLGSL 186
                         ++  H++M K        +    L     +++K   +V       L
Sbjct: 48  -------------KEEIDHIIMSK-----DAVSGTLRLFW--TLLSKQEEMVQKFVEEVL 87

Query: 187 EDPYG---EELRRRTEGISANEEALLGFLRDL--GGQ-----WCSRRKKRKIVDADLLGD 236
              Y      ++      S      +     L    Q       SR +    +   LL  
Sbjct: 88  RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL 147

Query: 237 TLPVGWKLLLGLKRREGR-----ASVYCRRY----ISPGGQHFVS---CKEVSG---YLQ 281
             P    L+ G+    G      A   C  Y           +++   C         LQ
Sbjct: 148 R-PAKNVLIDGVL---GSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQ 203

Query: 282 SYFGLNDTNQSINPGGDEMQQDYRVATDSLADIAQKENDQRQSNQQDKEVTLLGIDNLAE 341
                 D N +      +   + ++   S+     +   +R    +  E  LL + N+  
Sbjct: 204 KLLYQIDPNWTSRS---DHSSNIKLRIHSI-----QAELRRLLKSKPYENCLLVLLNVQN 255

Query: 342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGK-FECQFC 400
            +  + F    C++           LL     TTR       V D +             
Sbjct: 256 AKAWNAFN-LSCKI-----------LL-----TTR----FKQVTDFLSAATTTHISLDHH 294

Query: 401 HKVFHERRRYNGHVGIHVRNYVRGIEEPHGRLTLQKRTESP---------IRDEFPTRI- 450
                          + +  Y   ++     L  +  T +P         IRD       
Sbjct: 295 SMTLTPDEV----KSL-LLKY---LDCRPQDLPREVLTTNPRRLSIIAESIRD-GLATWD 345

Query: 451 ----SKMDALIEIAQNSI--LETSTGGPNNE----------PVDDAKFDT--------NM 486
                  D L  I ++S+  LE     P             P   A   T        ++
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLE-----PAEYRKMFDRLSVFP-PSAHIPTILLSLIWFDV 399

Query: 487 DELSDQQIIENMVTT---EKMKK-----IDDAGCLMDVKVEA---------CVDTGTSIP 529
            +     ++  +      EK  K     I      +++KV+           VD      
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQPKESTISIPS--IYLELKVKLENEYALHRSIVDHYNIPK 457

Query: 530 ADEQNGCKSEASDGKDGLVF--IA---EEIDKSVIERESGAESCLL-----APSINQNGC 579
             + +          D   +  I    + I+    ER +      L        I  +  
Sbjct: 458 TFDSDDL---IPPYLDQYFYSHIGHHLKNIEHP--ERMTLFRMVFLDFRFLEQKIRHDST 512

Query: 580 PVESNVNLGCLNTVEPGEPDEVNNNKNIRVEACSGSSNVEPADEKLSAAVEENLK---EN 636
               N +   LNT++            I           +P  E+L  A+ + L    EN
Sbjct: 513 A--WNASGSILNTLQ----QLKFYKPYICDN--------DPKYERLVNAILDFLPKIEEN 558

Query: 637 LLQYGVSETSM---SLLEPSHGFPTTNAVSNKVEDEAHRIEQR 676
           L+      T +   +L+               + +EAH+  QR
Sbjct: 559 LICS--KYTDLLRIALMAEDEA----------IFEEAHKQVQR 589

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	790
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.43
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.34
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.3
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.28
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.27
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.24
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.22
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.21
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.17
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.15
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.07
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.04
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.03
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.02
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.01
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.0
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	98.99
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.99
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	98.97
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.97
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.96
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.95
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.95
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.95
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.93
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	98.93
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	98.92
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.9
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	98.89
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.89
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.88
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.88
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	98.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	98.87
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.86
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.85
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.82
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.81
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	98.77
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.75
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	98.68
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	98.63
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.62
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.61
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.55
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.53
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.48
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.32
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.28
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.25
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.24
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.21
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.21
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.21
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.21
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.2
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.2
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.2
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.2
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.19
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.19
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.19
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.19
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.18
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.18
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.18
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.18
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.18
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.18
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.18
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.18
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.17
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.17
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.17
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.17
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.17
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.17
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.17
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.17
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.16
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.16
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.16
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.16
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.16
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.16
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.15
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.15
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.15
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.15
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.15
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.15
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.14
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.14
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.14
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.14
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.14
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.14
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.14
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.14
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.14
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.14
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.13
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.13
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.13
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.13
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.12
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.12
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.12
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.11
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.11
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.11
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.11
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.11
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.1
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.1
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.1
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.1
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.1
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.09
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.09
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.09
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.03
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.03
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.03
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.03
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.03
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.02
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.02
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.02
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.02
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.02
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.02
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.02
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.01
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.01
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.01
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.01
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.01
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.0
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.0
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.99
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	97.99
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.98
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.97
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.97
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.96
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.95
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.95
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.93
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	97.91
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.9
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	97.89
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	97.88
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.88
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.87
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.86
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.86
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.84
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.83
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.83
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.81
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	97.8
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	97.79
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.79
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.78
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.78
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.78
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.77
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.77
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.76
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.76
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.76
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.76
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.76
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.75
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.75
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.74
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.74
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.74
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.73
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.73
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.73
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.73
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.72
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.72
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.72
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	97.72
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	97.72
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	97.71
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.71
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.71
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.71
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.71
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	97.7
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	97.7
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.7
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.7
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	97.69
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.69
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.69
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.68
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.67
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.67
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.66
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	97.65
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	97.65
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	97.65
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.64
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	97.64
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.64
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.64
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.64
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.63
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.63
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	97.63
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.61
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.61
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.6
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.6
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.59
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	97.58
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.73
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	97.57
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	97.57
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	97.56
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.56
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.55
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.53
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.53
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.53
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	97.52
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	97.52
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	97.51
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	97.51
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	97.5
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.5
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.5
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	97.5
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.49
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	97.49
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	97.49
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.62
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.47
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.47
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	97.45
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.45
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	97.45
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	97.44
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.44
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.44
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.56
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.41
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	97.38
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	97.37
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.37
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	97.36
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.36
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.36
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.33
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	97.33
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.33
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.32
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.32
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.31
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	97.3
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.29
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.28
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.27
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.27
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.26
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.25
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	97.24
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.24
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.23
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.22
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	97.2
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.18
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	97.17
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	97.16
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	97.16
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.14
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	97.14
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.13
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	97.12
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.1
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.09
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	97.07
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.07
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	97.06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	97.04
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.04
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	96.98
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	96.98
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	96.95
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	96.93
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	96.92
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	96.92
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	95.97
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	95.93
1paa_A	30	Yeast transcription factor ADR1; transcription reg	96.88
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	95.86
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	96.81
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	96.81
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	96.78
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	96.78
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	96.73
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	96.57
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	96.55
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	96.53
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	96.53
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	96.52
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.47
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	96.47
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	96.44
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	96.42
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	96.41
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	96.32
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	96.05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	96.05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	95.14
2epa_A	72	Krueppel-like factor 10; transforming growth facto	95.12
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	94.96
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	94.55
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	93.41
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	92.15
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	90.44
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	89.33
1v65_A	64	Riken cDNA 2610044O15; transcriptional repressor,	86.26
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	83.16
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	83.03

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.43  E-value=4.8e-14  Score=116.29  Aligned_cols=58  Identities=22%  Similarity=0.403  Sum_probs=51.3

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhccccccCc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      ||||+|.+||++|...++|.+|++ +|.+                  .+||.|.+|||+|.+.+.|.+|+++|+++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~-~Ht~------------------ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRR-AHLG------------------YRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHH-HHHT------------------CCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHH-HhCC------------------CcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            699999999999999999999988 3431                  129999999999999999999999999864

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.34  E-value=9.9e-14  Score=130.68  Aligned_cols=80  Identities=18%  Similarity=0.315  Sum_probs=73.8

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC--cccCCcCccccCCchhhh
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYN  411 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~  411 (790)
                      +.++++|+|.+|++.|...+.|.+|++ +|.+.        ++.|.....|..|+++|++  ||.|++|+++|.+...|.
T Consensus        17 h~Gek~y~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~   95 (133)
T 2lt7_A           17 VDGRVYYICIVCKRSYVCLTSLRRHFN-IHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMS   95 (133)
T ss_dssp             ETTEEEEEETTTCCEESCHHHHHHHHH-HHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHH
T ss_pred             cCCCcCeECCCCCCCcCCHHHHHHHHH-HcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHH
Confidence            457899999999999999999999998 89765        6899999999999999997  999999999999999999


Q ss_pred             hhccccccCcc
Q 003869          412 GHVGIHVRNYV  422 (790)
Q Consensus       412 rH~RtHtgE~~  422 (790)
                      .|+++|+++..
T Consensus        96 ~H~~~hh~~~p  106 (133)
T 2lt7_A           96 SHIKSVHSQDP  106 (133)
T ss_dssp             HHHHHHTCCCT
T ss_pred             HHhHHhcCCCC
Confidence            99999987654

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=3e-12  Score=114.53  Aligned_cols=80  Identities=18%  Similarity=0.295  Sum_probs=69.8

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhh--hccc---------Cccc--cCCCCCCccccccCC--cccCCcCcccc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSF--HQRT---------TRRY--RLGSSVGDGVIIKDG--KFECQFCHKVF  404 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~--H~r~---------hK~F--~~sssLk~H~RtHtG--PYkC~~CGKsF  404 (790)
                      ..+.+++||.|..|++.|.....|..|++ .  |...         ++.|  .....|..|+++|++  ||.|.+|++.|
T Consensus        12 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f   90 (115)
T 2dmi_A           12 SIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSF   90 (115)
T ss_dssp             CCCCCCCSEEBSSSSCEESSHHHHHHHHH-HTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBC
T ss_pred             eeeCCCCCEECCccCchhcCHHHHHHHHH-HhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCcc
Confidence            34556899999999999999999999998 5  4322         4567  889999999999997  99999999999


Q ss_pred             CCchhhhhhccccccC
Q 003869          405 HERRRYNGHVGIHVRN  420 (790)
Q Consensus       405 s~ks~L~rH~RtHtgE  420 (790)
                      .+...|.+|+++|...
T Consensus        91 ~~~~~L~~H~~~hh~~  106 (115)
T 2dmi_A           91 ESLQDLSVHMIKTKHY  106 (115)
T ss_dssp             SSHHHHHHHHHHTTTT
T ss_pred             CCHHHHHHHHHHhCCc
Confidence            9999999999998744

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.28  E-value=7.2e-13  Score=114.42  Aligned_cols=79  Identities=20%  Similarity=0.326  Sum_probs=71.3

Q ss_pred             cCCcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC--cccCCcCccccCCchhhhh
Q 003869          343 QVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNG  412 (790)
Q Consensus       343 q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~r  412 (790)
                      .++++|.|.+|++.|.....|..|++ .|...        ++.|.....|..|+++|++  ||.|.+|++.|.....|.+
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGG-GCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHH-hcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            35689999999999999999999998 77654        5789999999999999997  9999999999999999999


Q ss_pred             hccccccCcc
Q 003869          413 HVGIHVRNYV  422 (790)
Q Consensus       413 H~RtHtgE~~  422 (790)
                      |+++|+++..
T Consensus        83 H~~~h~~~~~   92 (96)
T 2dmd_A           83 HLRSHTGDSG   92 (96)
T ss_dssp             HHTTCCSCCC
T ss_pred             HHHHhcCCCC
Confidence            9999997653

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.27  E-value=1.8e-12  Score=114.11  Aligned_cols=78  Identities=24%  Similarity=0.418  Sum_probs=71.1

Q ss_pred             CCcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC--cccCCcCccccCCchhhhhh
Q 003869          344 VRDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGH  413 (790)
Q Consensus       344 ~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH  413 (790)
                      .+++|.|.+|++.|.....|.+|++ .|...        ++.|.....|..|+++|++  ||.|.+|++.|.+...|.+|
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHH-HHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHH-HcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHH
Confidence            4689999999999999999999998 77654        5789999999999999997  99999999999999999999


Q ss_pred             ccccccCcc
Q 003869          414 VGIHVRNYV  422 (790)
Q Consensus       414 ~RtHtgE~~  422 (790)
                      +++|+++..
T Consensus        93 ~~~H~~~~~  101 (106)
T 2ee8_A           93 KTLHMQTSS  101 (106)
T ss_dssp             HHHTTSCCC
T ss_pred             HHHhCCCCC
Confidence            999997654

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.24  E-value=7.8e-13  Score=112.66  Aligned_cols=76  Identities=20%  Similarity=0.524  Sum_probs=67.6

Q ss_pred             CcccccC--CCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC--cccCCcCccccCCchhhhh
Q 003869          345 RDLFECH--KCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNG  412 (790)
Q Consensus       345 EKPyeC~--~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~r  412 (790)
                      ++||.|+  .|++.|.....|..|++ .|.+.        ++.|.....|..|+++|++  ||.|..|++.|.....|.+
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHH-HhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            5899998  59999999999999998 77654        6789999999999999997  9999999999999999999


Q ss_pred             hccccccCc
Q 003869          413 HVGIHVRNY  421 (790)
Q Consensus       413 H~RtHtgE~  421 (790)
                      |+++|+++.
T Consensus        81 H~~~H~~~k   89 (90)
T 1a1h_A           81 HTKIHLRQK   89 (90)
T ss_dssp             HHGGGGC--
T ss_pred             HHHHhcccC
Confidence            999999763

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.22  E-value=2.8e-12  Score=113.76  Aligned_cols=82  Identities=16%  Similarity=0.261  Sum_probs=71.8

Q ss_pred             cccccCCcccccCCCCcccCChhHHHHHHHhhhccc------CccccCCCCCCccccccCC--cccCCcCccccCCchhh
Q 003869          339 LAEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRY  410 (790)
Q Consensus       339 l~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L  410 (790)
                      +..+.++++|.|.+|++.|.....|..|++ .|.+.      ++.|.....|..|++ |++  ||+|.+|++.|.+...|
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~H~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHER-LCRNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHH-HHHHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHH-HCCCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            344567899999999999999999999998 67543      678999999999996 887  99999999999999999


Q ss_pred             hhhcc-ccccCcc
Q 003869          411 NGHVG-IHVRNYV  422 (790)
Q Consensus       411 ~rH~R-tHtgE~~  422 (790)
                      .+|++ +|+++..
T Consensus        86 ~~H~~~~H~~~~~   98 (107)
T 1wjp_A           86 WRHQVEVHNQNNM   98 (107)
T ss_dssp             HHHHHHTSCCCCC
T ss_pred             HHHHHHHcCCCCC
Confidence            99997 8987654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.21  E-value=1.1e-12  Score=109.66  Aligned_cols=72  Identities=29%  Similarity=0.575  Sum_probs=65.1

Q ss_pred             ccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC--cccCCcCccccCCchhhhhhccc
Q 003869          347 LFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHVGI  416 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~Rt  416 (790)
                      ||.|..|++.|.....|..|++ .|.+.        ++.|.....|..|++.|++  ||.|..|++.|.+...|.+|+++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   79 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRK   79 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHH-HHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHH-HcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHh
Confidence            6899999999999999999998 67544        5788889999999999997  99999999999999999999999


Q ss_pred             ccc
Q 003869          417 HVR  419 (790)
Q Consensus       417 Htg  419 (790)
                      |+|
T Consensus        80 H~g   82 (82)
T 2kmk_A           80 HTG   82 (82)
T ss_dssp             HC-
T ss_pred             hCC
Confidence            975

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=3.4e-12  Score=113.34  Aligned_cols=80  Identities=23%  Similarity=0.522  Sum_probs=71.8

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC--cccCCcCccccCCchhh
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRY  410 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L  410 (790)
                      .+.++++|.| .|++.|.....|.+|++ .|...        ++.|.....|..|+++|++  ||.|.+|++.|.....|
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF   81 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHH-HHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHH-HcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHH
Confidence            3557899999 99999999999999999 77654        5789999999999999997  99999999999999999


Q ss_pred             hhhccccccCcc
Q 003869          411 NGHVGIHVRNYV  422 (790)
Q Consensus       411 ~rH~RtHtgE~~  422 (790)
                      .+|+++|.+...
T Consensus        82 ~~H~~~~~~~~~   93 (110)
T 2csh_A           82 HRHVTSCTKSYE   93 (110)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHcccccc
Confidence            999999986544

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.15  E-value=7.3e-12  Score=107.89  Aligned_cols=76  Identities=25%  Similarity=0.413  Sum_probs=68.2

Q ss_pred             CCcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC----cccCCcCccccCCchhhh
Q 003869          344 VRDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG----KFECQFCHKVFHERRRYN  411 (790)
Q Consensus       344 ~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG----PYkC~~CGKsFs~ks~L~  411 (790)
                      ++++|.|.+|++.|.....|.+|++ .|...        ++.|.....|..|++.|++    ||.|.+|++.|.+...|.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHH-HSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHH-hcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            5689999999999999999999998 77654        5789889999999999985    899999999999999999


Q ss_pred             hhcc-ccccC
Q 003869          412 GHVG-IHVRN  420 (790)
Q Consensus       412 rH~R-tHtgE  420 (790)
                      .|++ +|.++
T Consensus        83 ~H~~~~H~~~   92 (95)
T 2yt9_A           83 GHIKQVHSGP   92 (95)
T ss_dssp             HHHHHTSCCC
T ss_pred             HHHHHhcCCC
Confidence            9986 88754

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.11  E-value=1.4e-11  Score=106.83  Aligned_cols=76  Identities=18%  Similarity=0.399  Sum_probs=67.7

Q ss_pred             cCCcccccCC--CCcccCChhHHHHHHHhhhccc----------CccccCCCCCCccccccCC--cccCCcCccccCCch
Q 003869          343 QVRDLFECHK--CEMTFDEKDTYLQHLLSFHQRT----------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERR  408 (790)
Q Consensus       343 q~EKPyeC~~--CgKtF~~kSsLkrH~l~~H~r~----------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks  408 (790)
                      ..+++|.|..  |++.|.....|..|++ .|.+.          ++.|.....|..|+++|++  ||.|.+|++.|....
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   89 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSD   89 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHH-HHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHH
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHH-HhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHH
Confidence            3468999997  9999999999999998 67543          5678888889999999997  999999999999999


Q ss_pred             hhhhhcccccc
Q 003869          409 RYNGHVGIHVR  419 (790)
Q Consensus       409 ~L~rH~RtHtg  419 (790)
                      .|..|+++|++
T Consensus        90 ~l~~H~~~H~~  100 (100)
T 2ebt_A           90 HLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhCC
Confidence            99999999974

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.07  E-value=5.9e-11  Score=98.56  Aligned_cols=61  Identities=20%  Similarity=0.516  Sum_probs=52.9

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhccccccCc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      ..++++|+|..|++.|.....|.+|++ .|.+                  .+||+|.+|++.|.+...|.+|+++|+++.
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~------------------~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKT-VHTG------------------EKPYRCNICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHH-HHCC------------------CCSEECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHH-HcCC------------------CCCEECCCCCchhCCHHHHHHHHHhcCCCC
Confidence            345789999999999999999999987 4431                  139999999999999999999999999764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.07  E-value=7e-11  Score=97.09  Aligned_cols=62  Identities=16%  Similarity=0.300  Sum_probs=53.4

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhccccccCc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      +.++++|+|.+|++.|.....|.+|++ .|.+                  .+||.|.+|++.|.+...|.+|+++|+++.
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHER-IHCT------------------DRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHG-GGCC------------------SCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHH-HcCC------------------CCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            456799999999999999999999987 3331                  139999999999999999999999999765


Q ss_pred             c
Q 003869          422 V  422 (790)
Q Consensus       422 ~  422 (790)
                      .
T Consensus        65 p   65 (70)
T 1x5w_A           65 S   65 (70)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.07  E-value=1.3e-11  Score=119.70  Aligned_cols=79  Identities=18%  Similarity=0.338  Sum_probs=64.7

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC--cccCCcCccccCCchhhh
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYN  411 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~  411 (790)
                      +.++++|.|..|++.|.....|..|++ .|.+.        ++.|.....|..|+++|++  ||.|.+|++.|.....|.
T Consensus       100 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~  178 (190)
T 2i13_A          100 HTGEKPYACPECGKSFSQLAHLRAHQR-THTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALN  178 (190)
T ss_dssp             HHTCCCEECTTTCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHH
T ss_pred             cCCCCCCcCCCCCCccCCHHHHHHHHH-HhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHH
Confidence            345688999999999999999999988 66654        6788888899999999987  899999999999999999


Q ss_pred             hhccccccCc
Q 003869          412 GHVGIHVRNY  421 (790)
Q Consensus       412 rH~RtHtgE~  421 (790)
                      .|+++|+++.
T Consensus       179 ~H~~~H~~~k  188 (190)
T 2i13_A          179 VHQRTHTGKK  188 (190)
T ss_dssp             HHHTTC----
T ss_pred             HHHHhcCCCC
Confidence            9999998764

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.04  E-value=9.5e-11  Score=96.99  Aligned_cols=62  Identities=21%  Similarity=0.420  Sum_probs=53.4

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhccccccC
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      .+.+++||.|.+|++.|.....|.+|++ .|.+                  .+||+|.+|++.|.+...|.+|+++|+++
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~------------------~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQR-VHTG------------------EKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHH-GGGC------------------SCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHH-hcCC------------------CCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            3556799999999999999999999987 3331                  13999999999999999999999999865


Q ss_pred             c
Q 003869          421 Y  421 (790)
Q Consensus       421 ~  421 (790)
                      .
T Consensus        69 ~   69 (72)
T 1x6e_A           69 P   69 (72)
T ss_dssp             S
T ss_pred             C
Confidence            4

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.04  E-value=3.9e-11  Score=107.56  Aligned_cols=79  Identities=19%  Similarity=0.423  Sum_probs=66.4

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhh--hccc--------CccccCCCCCCccccccCC--cccCCcCccccCCchh
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSF--HQRT--------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRR  409 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~--H~r~--------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~  409 (790)
                      +.++++|.|..|++.|.....|.+|+...  |...        ++.|.....|..|+++|++  ||.|.+|++.|.+...
T Consensus        30 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  109 (124)
T 2dlq_A           30 HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKD  109 (124)
T ss_dssp             HSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHH
T ss_pred             CCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHH
Confidence            33468999999999999999999998842  2222        5788889999999999997  9999999999999999


Q ss_pred             hhhhcc-ccccC
Q 003869          410 YNGHVG-IHVRN  420 (790)
Q Consensus       410 L~rH~R-tHtgE  420 (790)
                      |.+|++ .|.++
T Consensus       110 l~~H~~~~H~~~  121 (124)
T 2dlq_A          110 LQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHHTSSCS
T ss_pred             HHHHHHHHCCCC
Confidence            999997 57654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.04  E-value=2.6e-11  Score=108.17  Aligned_cols=76  Identities=18%  Similarity=0.378  Sum_probs=45.6

Q ss_pred             CcccccCC--CCcccCChhHHHHHHHhhhccc----------CccccCCCCCCccccccCC--cccCCcCccccCCchhh
Q 003869          345 RDLFECHK--CEMTFDEKDTYLQHLLSFHQRT----------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRY  410 (790)
Q Consensus       345 EKPyeC~~--CgKtF~~kSsLkrH~l~~H~r~----------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L  410 (790)
                      +++|.|.+  |++.|.....|..|++ .|.+.          ++.|.....|..|+++|++  ||.|.+|++.|.....|
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHH-hhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            45666665  6666666666666665 44321          3455555666666666654  66666666666666666


Q ss_pred             hhhccccccCc
Q 003869          411 NGHVGIHVRNY  421 (790)
Q Consensus       411 ~rH~RtHtgE~  421 (790)
                      ..|+++|+++.
T Consensus        83 ~~H~~~h~~~~   93 (119)
T 2jp9_A           83 KTHTRTHTGEK   93 (119)
T ss_dssp             HHHHHHHHTCC
T ss_pred             HHHHHHhcCCC
Confidence            66666665543

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.03  E-value=3.2e-11  Score=102.43  Aligned_cols=73  Identities=19%  Similarity=0.389  Sum_probs=65.0

Q ss_pred             CcccccCC--CCcccCChhHHHHHHHhhhccc----------CccccCCCCCCccccccCC--cccCCcCccccCCchhh
Q 003869          345 RDLFECHK--CEMTFDEKDTYLQHLLSFHQRT----------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRY  410 (790)
Q Consensus       345 EKPyeC~~--CgKtF~~kSsLkrH~l~~H~r~----------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L  410 (790)
                      .++|.|..  |++.|.....|..|++ .|.+.          ++.|.....|..|+++|++  ||.|..|++.|.....|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   81 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL   81 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHT-TSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHH-hcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHH
Confidence            36899999  9999999999999998 67643          5678888889999999997  99999999999999999


Q ss_pred             hhhccccc
Q 003869          411 NGHVGIHV  418 (790)
Q Consensus       411 ~rH~RtHt  418 (790)
                      ..|+++|.
T Consensus        82 ~~H~~~H~   89 (89)
T 2wbs_A           82 ALHMKRHF   89 (89)
T ss_dssp             HHHGGGGC
T ss_pred             HHHHHhhC
Confidence            99999984

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.02  E-value=2.4e-10  Score=95.58  Aligned_cols=62  Identities=23%  Similarity=0.504  Sum_probs=53.0

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhccccccCc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      ..++++|.|.+|++.|.....|.+|++ .|.+                  .+||.|.+|++.|.....|.+|+++|+++.
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~------------------~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   73 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRR-THTG------------------EKPYKCDECGKAFIQRSHLIGHHRVHTGSG   73 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHT-TTCC------------------SCSEECSSSCCEESSHHHHHHHGGGSCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHH-HcCC------------------CcCeeCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            345799999999999999999999977 3321                  139999999999999999999999999765


Q ss_pred             c
Q 003869          422 V  422 (790)
Q Consensus       422 ~  422 (790)
                      .
T Consensus        74 p   74 (77)
T 2cot_A           74 P   74 (77)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.01  E-value=1e-10  Score=91.84  Aligned_cols=56  Identities=21%  Similarity=0.415  Sum_probs=46.6

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhcccccc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      ++||.|..|++.|.....|..|++ .|.+                  .+||.|..|++.|.....|.+|+++|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~------------------~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLR-THTG------------------EKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHH-HHHC------------------CCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHH-HcCC------------------CCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            589999999999999999999988 3431                  1399999999999999999999999874

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.00  E-value=3.6e-11  Score=108.42  Aligned_cols=77  Identities=23%  Similarity=0.459  Sum_probs=62.4

Q ss_pred             CCcccccCCCCcccCChhHHHHHHHhhhccc----------CccccCCCCCCccccccCC--cccCC--cCccccCCchh
Q 003869          344 VRDLFECHKCEMTFDEKDTYLQHLLSFHQRT----------TRRYRLGSSVGDGVIIKDG--KFECQ--FCHKVFHERRR  409 (790)
Q Consensus       344 ~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~----------hK~F~~sssLk~H~RtHtG--PYkC~--~CGKsFs~ks~  409 (790)
                      ++++|.|..|++.|.....|..|++ .|.+.          ++.|.....|..|+++|++  ||.|+  .|++.|.+...
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~  109 (124)
T 1ubd_C           31 GPRVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTN  109 (124)
T ss_dssp             SCCCEECTTTCCEESSHHHHHHHGG-GTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTT
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHH-HcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHH
Confidence            4578999999999999999999987 66543          5677778888999999887  89995  49999999999


Q ss_pred             hhhhccccccCc
Q 003869          410 YNGHVGIHVRNY  421 (790)
Q Consensus       410 L~rH~RtHtgE~  421 (790)
                      |.+|+++|+++.
T Consensus       110 L~~H~~~H~~~k  121 (124)
T 1ubd_C          110 LKSHILTHAKAK  121 (124)
T ss_dssp             THHHHHHHC---
T ss_pred             HHHHHHHHcccc
Confidence            999999998754

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=98.99  E-value=4.1e-11  Score=106.84  Aligned_cols=75  Identities=21%  Similarity=0.453  Sum_probs=67.8

Q ss_pred             ccCCcccccC--CCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC--cccC--CcCccccCCc
Q 003869          342 VQVRDLFECH--KCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG--KFEC--QFCHKVFHER  407 (790)
Q Consensus       342 ~q~EKPyeC~--~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG--PYkC--~~CGKsFs~k  407 (790)
                      +.++++|.|.  .|++.|.....|..|++ .|.+.        ++.|.....|..|+++|++  ||.|  +.|++.|...
T Consensus        31 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~  109 (119)
T 2jp9_A           31 HTGEKPYQCDFKDCERRFSRSDQLKRHQR-RHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARS  109 (119)
T ss_dssp             HHTTCCEECCSTTCCCEESSHHHHHHHHH-HHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSH
T ss_pred             hCCCCCccCCCCCCcCccCCHHHHHHHHH-HcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCH
Confidence            3456899999  79999999999999998 67654        6889999999999999997  9999  8999999999


Q ss_pred             hhhhhhcccc
Q 003869          408 RRYNGHVGIH  417 (790)
Q Consensus       408 s~L~rH~RtH  417 (790)
                      ..|.+|+++|
T Consensus       110 ~~L~~H~~~H  119 (119)
T 2jp9_A          110 DELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHhcC
Confidence            9999999987

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.99  E-value=2.5e-10  Score=100.29  Aligned_cols=57  Identities=21%  Similarity=0.460  Sum_probs=50.4

Q ss_pred             CCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcCccccCCchhhhhhc-cccccC
Q 003869          344 VRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHV-GIHVRN  420 (790)
Q Consensus       344 ~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~-RtHtgE  420 (790)
                      ..++|.|++|++.|..+.+|.+|++                     +|++  ||.|.+|+|+|.++..|.+|+ ++|++|
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~---------------------~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLR---------------------LLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHH---------------------TTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhh---------------------hccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            4588999999999999999999988                     3444  999999999999999999996 678866


Q ss_pred             c
Q 003869          421 Y  421 (790)
Q Consensus       421 ~  421 (790)
                      .
T Consensus        84 ~   84 (85)
T 2lv2_A           84 N   84 (85)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.97  E-value=1.1e-10  Score=104.48  Aligned_cols=78  Identities=19%  Similarity=0.253  Sum_probs=69.0

Q ss_pred             CCcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCcccccc---CC--cccCCcCccccCCchhh
Q 003869          344 VRDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIK---DG--KFECQFCHKVFHERRRY  410 (790)
Q Consensus       344 ~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtH---tG--PYkC~~CGKsFs~ks~L  410 (790)
                      ++++|+|..|++.|.....|.+|++ .|.+.        ++.|.....|..|++.|   .+  +|.|.+|++.|.....|
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHH-HHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHH-hCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            4689999999999999999999998 77654        57888899999999853   44  99999999999999999


Q ss_pred             hhhccccccCcc
Q 003869          411 NGHVGIHVRNYV  422 (790)
Q Consensus       411 ~rH~RtHtgE~~  422 (790)
                      ..|+++|+++..
T Consensus        83 ~~H~~~h~~~~~   94 (124)
T 2dlq_A           83 RLHMVSHTGEMP   94 (124)
T ss_dssp             HHHHHHHSSSCS
T ss_pred             HHHHHHcCCCCC
Confidence            999999987654

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.97  E-value=3e-10  Score=89.08  Aligned_cols=56  Identities=14%  Similarity=0.459  Sum_probs=49.0

Q ss_pred             ccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhccccccCc
Q 003869          347 LFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      ||.|..|++.|.....|..|++ .|.+                  .+||.|..|++.|.....|.+|+++|+++.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~-~h~~------------------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIR-THTD------------------VRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH-HTSS------------------CCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHH-hcCC------------------CCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            6999999999999999999987 3331                  139999999999999999999999998753

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.96  E-value=1.5e-10  Score=108.44  Aligned_cols=76  Identities=18%  Similarity=0.385  Sum_probs=65.9

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhccc----------CccccCCCCCCccccccCC--cccCCc--CccccCCchhhh
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQRT----------TRRYRLGSSVGDGVIIKDG--KFECQF--CHKVFHERRRYN  411 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r~----------hK~F~~sssLk~H~RtHtG--PYkC~~--CGKsFs~ks~L~  411 (790)
                      +.|.|..|++.|.....|..|++ .|.+.          ++.|.....|..|+++|++  ||.|.+  |++.|.+...|.
T Consensus        61 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~  139 (155)
T 2rpc_A           61 YWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRK  139 (155)
T ss_dssp             CBTTCTTSSCCCSSHHHHHHHTH-HHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHH
T ss_pred             cccCCCCcccccCCHHHHHHHHH-hcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHH
Confidence            34899999999999999999988 66543          5778888889999999997  999997  999999999999


Q ss_pred             hhccccccCcc
Q 003869          412 GHVGIHVRNYV  422 (790)
Q Consensus       412 rH~RtHtgE~~  422 (790)
                      +|+++|+++..
T Consensus       140 ~H~~~H~~~k~  150 (155)
T 2rpc_A          140 KHMHVHTSDKS  150 (155)
T ss_dssp             HSSTTTTSCCC
T ss_pred             HHHHHhcCCCC
Confidence            99999998754

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.95  E-value=4.4e-10  Score=89.21  Aligned_cols=57  Identities=25%  Similarity=0.567  Sum_probs=49.0

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhc-cccccCc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHV-GIHVRNY  421 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~-RtHtgE~  421 (790)
                      +||.|..|++.|.....|.+|++ .|.+                  .+||.|..|++.|.+...|.+|+ ++|+++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~-~h~~------------------~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYR-SHTN------------------EKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHH-TTTS------------------SCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CcCcCCCCccccCCHHHHHHHHH-HhCC------------------CCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            58999999999999999999988 3331                  13999999999999999999996 7898654

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=2.9e-10  Score=100.18  Aligned_cols=64  Identities=19%  Similarity=0.312  Sum_probs=54.6

Q ss_pred             cccCCcccccCCCCcccC-ChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhcccccc
Q 003869          341 EVQVRDLFECHKCEMTFD-EKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~-~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      .+..+++|.|.+|++.|. ....|.+|++ .|.+                 ..+||.|.+|+|.|.++..|.+|+++|++
T Consensus        18 ~h~~~~~~~C~~C~k~f~~~~~~L~~H~~-~h~~-----------------~~~~~~C~~C~k~F~~~~~L~~H~~~h~~   79 (98)
T 2gqj_A           18 AIHERGEAVCPTCNVVTRKTLVGLKKHME-VCQK-----------------LQDALKCQHCRKQFKSKAGLNYHTMAEHS   79 (98)
T ss_dssp             TTTTTSCCCCTTTCCCCSSCSHHHHHHHH-HHHH-----------------HHHHHSCSSSCCCCSCHHHHHHHHHHHSC
T ss_pred             HhccCCCcCCCCCCCChhhhHHHHHHHHH-HHcC-----------------CCCCEECCCCCCccCCHHHHHHHHHHHcC
Confidence            345679999999999999 9999999988 4431                 01399999999999999999999999998


Q ss_pred             Ccc
Q 003869          420 NYV  422 (790)
Q Consensus       420 E~~  422 (790)
                      +..
T Consensus        80 ~kp   82 (98)
T 2gqj_A           80 AKP   82 (98)
T ss_dssp             SCS
T ss_pred             CCC
Confidence            765

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.95  E-value=2.4e-10  Score=92.44  Aligned_cols=61  Identities=21%  Similarity=0.560  Sum_probs=51.7

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhcccccc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      +.+++||.|..|++.|.....|.+|++..|..                 ..+||.|+.|++.|.+...|.+|+++|++
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~-----------------~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKR-----------------NVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHSSS-----------------SCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHcCC-----------------CCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            45679999999999999999999998822420                 12399999999999999999999999875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.93  E-value=1.3e-11  Score=105.90  Aligned_cols=73  Identities=14%  Similarity=0.192  Sum_probs=63.9

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC-cccCCcCccccCCchhhhhhcc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG-KFECQFCHKVFHERRRYNGHVG  415 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG-PYkC~~CGKsFs~ks~L~rH~R  415 (790)
                      ++||.|..|++.|.....|..|++ .|.+.        ++.|.....|..|+++|++ +|.|..|++.|.....|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH-HHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHH-HcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHH
Confidence            589999999999999999999998 67654        5788888889999888887 8999999999999999999987


Q ss_pred             ccc
Q 003869          416 IHV  418 (790)
Q Consensus       416 tHt  418 (790)
                      .+.
T Consensus        80 ~~h   82 (88)
T 1llm_C           80 RLK   82 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            664

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.93  E-value=3.5e-10  Score=105.61  Aligned_cols=77  Identities=14%  Similarity=0.307  Sum_probs=69.1

Q ss_pred             ccCCcccccCC--CCcccCChhHHHHHHHhhhccc----------CccccCCCCCCccc-cccCC--cccCCc--Ccccc
Q 003869          342 VQVRDLFECHK--CEMTFDEKDTYLQHLLSFHQRT----------TRRYRLGSSVGDGV-IIKDG--KFECQF--CHKVF  404 (790)
Q Consensus       342 ~q~EKPyeC~~--CgKtF~~kSsLkrH~l~~H~r~----------hK~F~~sssLk~H~-RtHtG--PYkC~~--CGKsF  404 (790)
                      +.++++|.|..  |++.|.....|..|++ .|.+.          ++.|.....|..|+ ++|++  ||.|.+  |+++|
T Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f  140 (155)
T 2gli_A           62 HTGEKPHKCTFEGCRKSYSRLENLKTHLR-SHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRY  140 (155)
T ss_dssp             HHCCCCCCCCSTTCCCCCSSHHHHHHHHH-HTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEE
T ss_pred             cCCCCCccCCCCCCCCcccCHHHHHHHHH-HcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCcccc
Confidence            44578999985  9999999999999998 67643          67899999999999 89997  999998  99999


Q ss_pred             CCchhhhhhcccccc
Q 003869          405 HERRRYNGHVGIHVR  419 (790)
Q Consensus       405 s~ks~L~rH~RtHtg  419 (790)
                      .....|..|+++|+|
T Consensus       141 ~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          141 TDPSSLRKHVKTVHG  155 (155)
T ss_dssp             SSHHHHHHHHHHSCC
T ss_pred             CCHHHHHHHHHhhcC
Confidence            999999999999975

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=98.92  E-value=1e-10  Score=113.47  Aligned_cols=80  Identities=15%  Similarity=0.325  Sum_probs=71.7

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC--cccCCcCccccCCchhhh
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYN  411 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~  411 (790)
                      +.++++|.|..|++.|.....|..|++ .|.+.        ++.|.....|..|+++|++  ||.|..|++.|.....|.
T Consensus        72 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  150 (190)
T 2i13_A           72 HTGEKPYKCPECGKSFSQRANLRAHQR-THTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLH  150 (190)
T ss_dssp             HHCCCCEECTTTCCEESCHHHHHHHHH-HHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHH
T ss_pred             cCCCCCccCcccCCccCCHHHHHHHHH-hcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHH
Confidence            445689999999999999999999998 66544        6789999999999999997  999999999999999999


Q ss_pred             hhccccccCcc
Q 003869          412 GHVGIHVRNYV  422 (790)
Q Consensus       412 rH~RtHtgE~~  422 (790)
                      .|+++|+++..
T Consensus       151 ~H~~~H~~~~~  161 (190)
T 2i13_A          151 THQRTHTGEKP  161 (190)
T ss_dssp             HHHHHHHCCCC
T ss_pred             HHHHhcCCCCC
Confidence            99999987654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.90  E-value=1.1e-09  Score=91.55  Aligned_cols=64  Identities=22%  Similarity=0.409  Sum_probs=53.6

Q ss_pred             cccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhccccc
Q 003869          339 LAEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       339 l~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      ...+.+++||.|.+|++.|.....|.+|++..|...                 .+||.|.+|++.|.+...|.+|+++|+
T Consensus         7 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~-----------------~~~~~C~~C~~~f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A            7 GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN-----------------VAKFHCPHCDTVIARKSDLGVHLRKQH   69 (77)
T ss_dssp             CCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS-----------------CSSEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCC-----------------CCccCCCCCCCccCCHHHHHHHHHHhC
Confidence            345667899999999999999999999987344411                 138999999999999999999999876


Q ss_pred             c
Q 003869          419 R  419 (790)
Q Consensus       419 g  419 (790)
                      +
T Consensus        70 ~   70 (77)
T 2ct1_A           70 S   70 (77)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.89  E-value=8e-10  Score=100.21  Aligned_cols=71  Identities=15%  Similarity=0.304  Sum_probs=57.3

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhh-ccccc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGH-VGIHV  418 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH-~RtHt  418 (790)
                      ....+++||.|.+|++.|..++.|.+|++..|.+.               ...+||.|.+|||+|..++.|.+| +++|+
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~---------------~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Ht   75 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV---------------VLNSSYVCVECNFLTKRYDALSEHNLKYHP   75 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSC---------------CCSCCEEETTTTEEESSTHHHHTHHHHTST
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC---------------CCCCCcCCCCCCcccCCHHHHHHHHHHhcC
Confidence            34557899999999999999999999987345320               012399999999999999999999 89999


Q ss_pred             cCcccCc
Q 003869          419 RNYVRGI  425 (790)
Q Consensus       419 gE~~~~~  425 (790)
                      ++..-..
T Consensus        76 gekpy~C   82 (102)
T 2ghf_A           76 GEENFKL   82 (102)
T ss_dssp             TCCCEEE
T ss_pred             CCCCeeC
Confidence            8876433

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=9.9e-10  Score=91.84  Aligned_cols=64  Identities=23%  Similarity=0.393  Sum_probs=52.0

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhcc-ccccC
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVG-IHVRN  420 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~R-tHtgE  420 (790)
                      +.+++||+|.+|++.|.....|.+|++ .|.+.               ...+||.|.+|++.|.....|.+|++ .|.++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~---------------~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQR-KHAET---------------VAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHH-HHHHH---------------TTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHH-Hhhcc---------------CCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            456799999999999999999999988 55421               01249999999999999999999995 56544


Q ss_pred             c
Q 003869          421 Y  421 (790)
Q Consensus       421 ~  421 (790)
                      .
T Consensus        66 ~   66 (78)
T 2d9h_A           66 L   66 (78)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.88  E-value=1.8e-10  Score=96.48  Aligned_cols=70  Identities=21%  Similarity=0.448  Sum_probs=60.6

Q ss_pred             cccc--CCCCcccCChhHHHHHHHhhhccc----------CccccCCCCCCccccccCCcccCCc---CccccCCchhhh
Q 003869          347 LFEC--HKCEMTFDEKDTYLQHLLSFHQRT----------TRRYRLGSSVGDGVIIKDGKFECQF---CHKVFHERRRYN  411 (790)
Q Consensus       347 PyeC--~~CgKtF~~kSsLkrH~l~~H~r~----------hK~F~~sssLk~H~RtHtGPYkC~~---CGKsFs~ks~L~  411 (790)
                      ||.|  ..|++.|.....|..|++ .|.+.          ++.|.....|..|+++|++ |.|..   |++.|.....|.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~C~~~~~C~~~f~~~~~l~   78 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-YPCKKDDSCSFVGKTWTLYL   78 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH-HHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS-EECCSCSSCCCEESSHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHH-HhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC-CCCCCCCCCCCccCCHHHHH
Confidence            6899  889999999999999997 67543          5677788888899999998 99999   999999999999


Q ss_pred             hhccccc
Q 003869          412 GHVGIHV  418 (790)
Q Consensus       412 rH~RtHt  418 (790)
                      +|+++|+
T Consensus        79 ~H~~~hh   85 (85)
T 2j7j_A           79 KHVAECH   85 (85)
T ss_dssp             HHHHHCC
T ss_pred             HHHHhcC
Confidence            9998874

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.88  E-value=1.9e-09  Score=90.82  Aligned_cols=72  Identities=21%  Similarity=0.348  Sum_probs=57.5

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhcccccc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      ..+.+++||.|.+|++.|.....|.+|++..|...               ...+||.|.+|++.|.....|.+|+++|++
T Consensus         8 ~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~---------------~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   72 (86)
T 1x6h_A            8 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN---------------FVPAAFVCSKCGKTFTRRNTMARHADNCAG   72 (86)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS---------------CCCCCEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             ceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc---------------CCCcceECCCCCChhCCHHHHHHHHHHccC
Confidence            44566899999999999999999999987333210               011389999999999999999999999998


Q ss_pred             CcccCcC
Q 003869          420 NYVRGIE  426 (790)
Q Consensus       420 E~~~~~~  426 (790)
                      +......
T Consensus        73 ~~~~~~~   79 (86)
T 1x6h_A           73 PDGVEGE   79 (86)
T ss_dssp             CCSCCCC
T ss_pred             CCCcccC
Confidence            7665433

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=98.87  E-value=4.7e-10  Score=108.78  Aligned_cols=79  Identities=20%  Similarity=0.458  Sum_probs=69.6

Q ss_pred             cccCCcccccC--CCCcccCChhHHHHHHHhhhc-c----------cCccccCCCCCCccccccCC--cccCCc--Cccc
Q 003869          341 EVQVRDLFECH--KCEMTFDEKDTYLQHLLSFHQ-R----------TTRRYRLGSSVGDGVIIKDG--KFECQF--CHKV  403 (790)
Q Consensus       341 ~~q~EKPyeC~--~CgKtF~~kSsLkrH~l~~H~-r----------~hK~F~~sssLk~H~RtHtG--PYkC~~--CGKs  403 (790)
                      .+.++++|.|.  .|++.|.....|.+|+...|. +          -++.|.....|..|+++|++  ||.|+.  |+++
T Consensus        66 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~  145 (190)
T 1tf6_A           66 THTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKR  145 (190)
T ss_dssp             TTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCB
T ss_pred             HccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCch
Confidence            34567899999  899999999999999965773 2          26788889999999999997  999988  9999


Q ss_pred             cCCchhhhhhcccccc
Q 003869          404 FHERRRYNGHVGIHVR  419 (790)
Q Consensus       404 Fs~ks~L~rH~RtHtg  419 (790)
                      |.....|.+|+++|++
T Consensus       146 F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          146 FSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             CSSHHHHHHHHTSSCS
T ss_pred             hcCHHHHHHHHHHhCC
Confidence            9999999999999997

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=98.87  E-value=3.4e-10  Score=102.01  Aligned_cols=77  Identities=23%  Similarity=0.459  Sum_probs=67.6

Q ss_pred             CcccccC--CCCcccCChhHHHHHHHhhhccc-------CccccCCCCCCccccccCC--cccCCc--CccccCCchhhh
Q 003869          345 RDLFECH--KCEMTFDEKDTYLQHLLSFHQRT-------TRRYRLGSSVGDGVIIKDG--KFECQF--CHKVFHERRRYN  411 (790)
Q Consensus       345 EKPyeC~--~CgKtF~~kSsLkrH~l~~H~r~-------hK~F~~sssLk~H~RtHtG--PYkC~~--CGKsFs~ks~L~  411 (790)
                      +++|.|+  .|++.|.....|..|++ .|...       ++.|.....|..|+++|++  ||.|..  |++.|.....|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLH-THGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHG-GGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHH-HcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            4789999  89999999999999998 77322       5789999999999999997  999986  999999999999


Q ss_pred             hhccccccCcc
Q 003869          412 GHVGIHVRNYV  422 (790)
Q Consensus       412 rH~RtHtgE~~  422 (790)
                      .|+++|+++..
T Consensus        82 ~H~~~h~~~~~   92 (124)
T 1ubd_C           82 THVRIHTGDRP   92 (124)
T ss_dssp             HHHHHHHCCCC
T ss_pred             HHHHHhCCCCc
Confidence            99999987654

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.86  E-value=8.6e-10  Score=103.32  Aligned_cols=81  Identities=17%  Similarity=0.315  Sum_probs=70.8

Q ss_pred             CCcccccCCCCcccCChhHHHHHHHhhhccc----------------CccccCCCCCCccccccCC--cccCCc--Cccc
Q 003869          344 VRDLFECHKCEMTFDEKDTYLQHLLSFHQRT----------------TRRYRLGSSVGDGVIIKDG--KFECQF--CHKV  403 (790)
Q Consensus       344 ~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~----------------hK~F~~sssLk~H~RtHtG--PYkC~~--CGKs  403 (790)
                      .+++|.|..|++.|.....|.+|++..|...                ++.|.....|..|+++|++  ||.|.+  |++.
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  101 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI  101 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc
Confidence            4578999999999999999999998557642                4678888889999999997  999998  9999


Q ss_pred             cCCchhhhhhccccccCcccC
Q 003869          404 FHERRRYNGHVGIHVRNYVRG  424 (790)
Q Consensus       404 Fs~ks~L~rH~RtHtgE~~~~  424 (790)
                      |.....|.+|+++|+++....
T Consensus       102 f~~~~~L~~H~~~h~~~~~~~  122 (155)
T 2rpc_A          102 FARSENLKIHKRTHTGEKPFK  122 (155)
T ss_dssp             ESCHHHHHHHHTTTCSSCSBC
T ss_pred             cCCHHHHHHHHHhhCCCCCcc
Confidence            999999999999999875433

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.85  E-value=1.2e-09  Score=96.90  Aligned_cols=58  Identities=16%  Similarity=0.281  Sum_probs=50.7

Q ss_pred             cCCcccccCCCCccc-CChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhh-ccccccC
Q 003869          343 QVRDLFECHKCEMTF-DEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGH-VGIHVRN  420 (790)
Q Consensus       343 q~EKPyeC~~CgKtF-~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH-~RtHtgE  420 (790)
                      ..+++|.|++|++.| ....+|..|++ .| +.                  +||.|.+|+|.|.++..|.+| +++|+++
T Consensus        30 ~~~~~~~C~~C~k~F~~~~~~L~~H~~-~h-~~------------------k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           30 VDKGSVSCPTCQAVGRKTIEGLKKHME-NC-KQ------------------EMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             HHTSCEECTTTCSCEESSHHHHHHHHH-HH-CC------------------CCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             cCCCCcCCCCCCCCcccCHHHHHHHHH-HH-CC------------------CCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            356899999999999 99999999988 33 21                  299999999999999999999 9999854

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.82  E-value=1.5e-09  Score=89.51  Aligned_cols=58  Identities=22%  Similarity=0.594  Sum_probs=49.8

Q ss_pred             ccCCcccccC--CCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhccccc
Q 003869          342 VQVRDLFECH--KCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       342 ~q~EKPyeC~--~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      +.++++|.|+  .|++.|.....|.+|++ .|.+                  .+||.|.+|++.|.+...|.+|+++|+
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~-~h~~------------------~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIR-IHTG------------------QKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHH-HHHC------------------CCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHH-hhCC------------------CCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            3457999997  59999999999999987 4431                  139999999999999999999999985

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.81  E-value=1.2e-09  Score=99.77  Aligned_cols=59  Identities=22%  Similarity=0.338  Sum_probs=51.4

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhccccccCc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      +.+++||.|.+|++.|.....|.+|++                     +|.+||.|.+|++.|.+...|.+|+++|++.-
T Consensus        69 h~~~~~~~C~~C~k~f~~~~~l~~H~~---------------------~H~~~~~C~~C~k~f~~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A           69 SKAISQFVCPLCLMPFSSSVSLKQHIR---------------------YTEHTKVCPVCKKEFTSTDSALDHVCKKHNIC  127 (129)
T ss_dssp             HHHHCSEECTTTCCEESSHHHHHHHHH---------------------HTCCCCBCTTTCCBCSSHHHHHHHHHHTTCCC
T ss_pred             hCCCCCeECCCCCcccCCHhHHHHHHH---------------------HCCCCCCCCCCCcccCCHHHHHHHHHHHCCcc
Confidence            445789999999999999999999977                     34358999999999999999999999998753

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=98.77  E-value=1.3e-09  Score=105.61  Aligned_cols=75  Identities=20%  Similarity=0.398  Sum_probs=67.3

Q ss_pred             CCccccc--CCCCcccCChhHHHHHHHhhhccc----------CccccCCCCCCccccccCCcccCCc---CccccCCch
Q 003869          344 VRDLFEC--HKCEMTFDEKDTYLQHLLSFHQRT----------TRRYRLGSSVGDGVIIKDGKFECQF---CHKVFHERR  408 (790)
Q Consensus       344 ~EKPyeC--~~CgKtF~~kSsLkrH~l~~H~r~----------hK~F~~sssLk~H~RtHtGPYkC~~---CGKsFs~ks  408 (790)
                      .+++|.|  ..|++.|.....|..|++ .|.+.          ++.|.....|..|+++|++ |.|..   |++.|....
T Consensus       101 ~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~-~~C~~~~~C~~~f~~~~  178 (190)
T 1tf6_A          101 KICVYVCHFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-YPCKKDDSCSFVGKTWT  178 (190)
T ss_dssp             TTSCCEECSSSSCEECSSHHHHHHHHG-GGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS-CCCCSTTTCCCCCSCHH
T ss_pred             CcceeeCCCCCCccccCCHHHHHHHHH-HhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC-CcCCCCCcCCCccccHH
Confidence            4689999  889999999999999998 77653          5788889999999999999 99999   999999999


Q ss_pred             hhhhhccccccC
Q 003869          409 RYNGHVGIHVRN  420 (790)
Q Consensus       409 ~L~rH~RtHtgE  420 (790)
                      .|.+|+++|+++
T Consensus       179 ~l~~H~~~h~~e  190 (190)
T 1tf6_A          179 LYLKHVAECHQD  190 (190)
T ss_dssp             HHHHHHTTCC--
T ss_pred             HHHHHHHhhcCC
Confidence            999999999874

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.1e-09  Score=86.72  Aligned_cols=56  Identities=20%  Similarity=0.221  Sum_probs=48.7

Q ss_pred             CCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCC-cCccccCCchhhhhhccccccC
Q 003869          344 VRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQ-FCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       344 ~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~-~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      +++||.|.+|++.|. .+.|..|++ . .                  ..+||.|. .|+|+|..++.|..|+++|...
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~-~-~------------------~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQY-Q-C------------------PRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHH-H-C------------------SSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHH-H-c------------------CCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            568999999999999 999999987 2 2                  12399999 9999999999999999999743

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.68  E-value=3.5e-09  Score=98.74  Aligned_cols=79  Identities=19%  Similarity=0.308  Sum_probs=62.3

Q ss_pred             cCCcccccCC-----CCcccCChhHHHHHHHhhhccc----------CccccCCCCCCccccccCC--cccCCc--Cccc
Q 003869          343 QVRDLFECHK-----CEMTFDEKDTYLQHLLSFHQRT----------TRRYRLGSSVGDGVIIKDG--KFECQF--CHKV  403 (790)
Q Consensus       343 q~EKPyeC~~-----CgKtF~~kSsLkrH~l~~H~r~----------hK~F~~sssLk~H~RtHtG--PYkC~~--CGKs  403 (790)
                      .++++|.|..     |++.|.....|.+|++ .|.+.          ++.|.....|..|+++|++  ||.|.+  |++.
T Consensus        30 ~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  108 (155)
T 2gli_A           30 GERKEFVCHWGGCSRELRPFKAQYMLVVHMR-RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKA  108 (155)
T ss_dssp             SCSSCCCCCBTTCTTTTCCCSSHHHHHHHTH-HHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCE
T ss_pred             CCCcceeCCCCCccchhhhhhhHHHHHHHHH-hcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCc
Confidence            3457888764     3488999999999987 66542          5677778888899988886  899988  9999


Q ss_pred             cCCchhhhhhc-cccccCcc
Q 003869          404 FHERRRYNGHV-GIHVRNYV  422 (790)
Q Consensus       404 Fs~ks~L~rH~-RtHtgE~~  422 (790)
                      |.....|.+|+ ++|+++..
T Consensus       109 f~~~~~L~~H~~~~H~~~~~  128 (155)
T 2gli_A          109 FSNASDRAKHQNRTHSNEKP  128 (155)
T ss_dssp             ESSSSTTHHHHHHTTCSCCC
T ss_pred             cCCHHHHHHHHHHhcCCCCC
Confidence            99999999998 78886644

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=98.63  E-value=3e-09  Score=100.03  Aligned_cols=64  Identities=11%  Similarity=0.203  Sum_probs=56.1

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC--------cccCCcCccccC
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG--------KFECQFCHKVFH  405 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG--------PYkC~~CGKsFs  405 (790)
                      +.+++||.|.+|++.|.....|..|++ +|.+.        ++.|.....|..|+++|++        +|+|..|++.|.
T Consensus        45 H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~  123 (133)
T 2lt7_A           45 HSWEKKYPCRYCEKVFPLAEYRTKHEI-HHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQI  123 (133)
T ss_dssp             HHCCSCEECSSSSCEESSHHHHHHHHH-HHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCC
T ss_pred             cCCCCCeeCCccCeecccccchhhhcc-ccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhh
Confidence            345689999999999999999999998 89765        6899999999999998863        699999999875


Q ss_pred             C
Q 003869          406 E  406 (790)
Q Consensus       406 ~  406 (790)
                      +
T Consensus       124 ~  124 (133)
T 2lt7_A          124 R  124 (133)
T ss_dssp             C
T ss_pred             h
Confidence            3

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.62  E-value=2.1e-08  Score=82.43  Aligned_cols=56  Identities=20%  Similarity=0.419  Sum_probs=47.9

Q ss_pred             cCCcccccCC--CCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCc--CccccCCchhhhhhcccc
Q 003869          343 QVRDLFECHK--CEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQF--CHKVFHERRRYNGHVGIH  417 (790)
Q Consensus       343 q~EKPyeC~~--CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~--CGKsFs~ks~L~rH~RtH  417 (790)
                      ...++|.|..  |++.|.....|.+|++ .|.+                  .+||+|.+  |++.|.+...|.+|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTR-THTG------------------EKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHH-HHSS------------------SCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHH-hcCC------------------CCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3468999998  9999999999999987 3431                  13999965  999999999999999987

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.61  E-value=2.5e-08  Score=82.88  Aligned_cols=61  Identities=20%  Similarity=0.372  Sum_probs=51.2

Q ss_pred             CCcccccCC--CCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCc--CccccCCchhhhhhcccccc
Q 003869          344 VRDLFECHK--CEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQF--CHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       344 ~EKPyeC~~--CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~--CGKsFs~ks~L~rH~RtHtg  419 (790)
                      ++++|.|..  |++.|.....|.+|++..|.                  ..+||.|.+  |++.|.....|.+|+++|++
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~------------------~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~   65 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI------------------HQKSFSCPEPACGKSFNFKKHLKEHMKLHSD   65 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGG------------------SCCCEECSCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhC------------------CCCCeECCCCCCcCccCCHHHHHHHHHHhCC
Confidence            468999997  99999999999999873343                  123899998  99999999999999999987


Q ss_pred             Ccc
Q 003869          420 NYV  422 (790)
Q Consensus       420 E~~  422 (790)
                      +..
T Consensus        66 ~~~   68 (79)
T 2dlk_A           66 TRD   68 (79)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            654

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.55  E-value=1.8e-08  Score=79.07  Aligned_cols=47  Identities=13%  Similarity=0.221  Sum_probs=44.2

Q ss_pred             CccccCCCCCCccccccCC--cccCCcCccccCCchhhhhhccccccCc
Q 003869          375 TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       375 hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      .|.|.....|..|+++|++  ||.|.+|++.|.+.+.|.+|+++|+++.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   51 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTS
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            5789999999999999998  9999999999999999999999999865

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.53  E-value=4.5e-08  Score=84.20  Aligned_cols=68  Identities=16%  Similarity=0.125  Sum_probs=51.7

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhccccccCccc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      ..|.|..|++.|.....|.+|++..|.+.. ....      +   .-.+|.|.+|++.|.....|.+|+++|+++..-
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~-~~~~------~---~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   91 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGP-EQNN------H---VCYWEECPREGKSFKAKYKLVNHIRVHTGEKSG   91 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCT-TCSC------C---CCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCC-CCCc------c---ceeccCCCCCCcccCCHHHHHHHHHhcCCCCCC
Confidence            458899999999999999999883365321 0000      0   001499999999999999999999999987643

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.48  E-value=1.2e-07  Score=74.44  Aligned_cols=49  Identities=18%  Similarity=0.322  Sum_probs=39.7

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCc
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHER  407 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~k  407 (790)
                      .+.+++||.|.+|++.|.....|.+|++.+|.+                  .+||+|.+|+|.|.+.
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~------------------~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS------------------ERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCC------------------CCCCCSSSSCCSSCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCC------------------CCCccCCCCCCCCCCC
Confidence            355679999999999999999999997533331                  1399999999999863

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=6.1e-08  Score=78.82  Aligned_cols=57  Identities=18%  Similarity=0.211  Sum_probs=47.2

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccCCchhhhhhcccccc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      ..+.+++||.|.+|++.|.....|..                          .+||.|..|++.|.+...|..|+++|++
T Consensus        11 ~~h~~~~~~~C~~C~k~f~~~~~l~~--------------------------~~~~~C~~C~~~f~~~~~l~~H~~~H~~   64 (73)
T 2ctu_A           11 KIHLGDRSQKCSKCGIIFIRRSTLSR--------------------------RKTPMCEKCRKDSCQEAALNKDEGNESG   64 (73)
T ss_dssp             CCCCCCSEEECSSSCCEEECCCCCCC--------------------------SSSCCCHHHHHTCSCCCSSCCCSSCCCC
T ss_pred             HHhCCCCCeeCCcccchhCCHHHhCc--------------------------CCCCCCCCCChhhcCHHHHHHHHHhhcC
Confidence            34566899999999999987776521                          3489999999999999999999999987


Q ss_pred             Ccc
Q 003869          420 NYV  422 (790)
Q Consensus       420 E~~  422 (790)
                      +..
T Consensus        65 ~~~   67 (73)
T 2ctu_A           65 KKT   67 (73)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.28  E-value=2.7e-07  Score=65.89  Aligned_cols=35  Identities=20%  Similarity=0.336  Sum_probs=32.1

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccC
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      .|+++|++  ||+|+.|++.|.+...|.+|+++|+++
T Consensus         1 ~H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            37888987  999999999999999999999999864

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.25  E-value=4.2e-07  Score=66.70  Aligned_cols=37  Identities=19%  Similarity=0.391  Sum_probs=33.6

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||.|.+|+++|.+...|.+|+++|+++..
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   39 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP   39 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCC
Confidence            48888997  99999999999999999999999997653

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.24  E-value=6e-07  Score=67.57  Aligned_cols=38  Identities=21%  Similarity=0.420  Sum_probs=34.5

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      +|+++|++  ||.|.+|++.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPS   41 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCS
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCC
Confidence            68889987  999999999999999999999999987643

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.21  E-value=7.5e-07  Score=66.92  Aligned_cols=38  Identities=18%  Similarity=0.399  Sum_probs=34.4

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      +|+++|++  ||.|..|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPS   41 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            68889997  999999999999999999999999987543

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.21  E-value=5.6e-07  Score=67.25  Aligned_cols=37  Identities=22%  Similarity=0.224  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|++.|.+.+.|..|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSG   40 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCC
Confidence            58889997  99999999999999999999999997654

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.21  E-value=5.3e-07  Score=66.32  Aligned_cols=36  Identities=25%  Similarity=0.460  Sum_probs=32.8

Q ss_pred             cccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          387 GVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       387 H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      |+++|++  ||.|.+|++.|.+...|.+|+++|+++..
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   38 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESG   38 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCS
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCC
Confidence            6778887  99999999999999999999999997654

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.21  E-value=7e-07  Score=67.09  Aligned_cols=38  Identities=26%  Similarity=0.461  Sum_probs=34.4

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      .|+++|++  ||.|..|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCC
Confidence            58889997  999999999999999999999999987643

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.20  E-value=6e-07  Score=67.60  Aligned_cols=38  Identities=24%  Similarity=0.369  Sum_probs=34.5

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      .|+++|++  ||+|.+|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPS   41 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCC
Confidence            58889997  999999999999999999999999987643

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.20  E-value=6.3e-07  Score=66.42  Aligned_cols=37  Identities=19%  Similarity=0.273  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|++.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESG   40 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSS
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCC
Confidence            58889997  99999999999999999999999997754

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.20  E-value=6.2e-07  Score=68.39  Aligned_cols=40  Identities=18%  Similarity=0.302  Sum_probs=34.5

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcCcc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFCHK  402 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~CGK  402 (790)
                      +..+++|.|.+|++.|.....|.+|++                     +|++  ||.|.+|+|
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~---------------------~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKL---------------------SHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGG---------------------GSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHH---------------------hcCCCCCccCCCCCC
Confidence            456799999999999999999999976                     3444  999999997

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.20  E-value=6.1e-07  Score=67.55  Aligned_cols=39  Identities=26%  Similarity=0.470  Sum_probs=34.6

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcccC
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVRG  424 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~~  424 (790)
                      .|+++|++  ||+|.+|+|.|.+...|.+|+++|+++..-.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~   42 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSG   42 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCS
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47888987  9999999999999999999999999876533

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.19  E-value=7.5e-07  Score=66.76  Aligned_cols=38  Identities=24%  Similarity=0.396  Sum_probs=34.5

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      +|+++|++  ||.|..|++.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPS   41 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            68889987  999999999999999999999999987643

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.19  E-value=7.4e-07  Score=66.81  Aligned_cols=38  Identities=24%  Similarity=0.379  Sum_probs=34.4

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      .|+++|++  ||.|..|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~   41 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPS   41 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSS
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCc
Confidence            58889997  999999999999999999999999977543

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.19  E-value=7.5e-07  Score=66.92  Aligned_cols=38  Identities=24%  Similarity=0.383  Sum_probs=34.3

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPS   41 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCC
Confidence            58889997  999999999999999999999999987543

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.19  E-value=8e-07  Score=66.75  Aligned_cols=38  Identities=26%  Similarity=0.478  Sum_probs=34.3

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPS   41 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCC
Confidence            58888997  999999999999999999999999987543

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.18  E-value=5.7e-07  Score=67.56  Aligned_cols=39  Identities=23%  Similarity=0.482  Sum_probs=34.8

Q ss_pred             CccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          385 GDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       385 k~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      ..|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..-
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2em3_A            1 GSSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPS   41 (46)
T ss_dssp             CCCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCC
T ss_pred             CCCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            368889997  999999999999999999999999987543

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=6.5e-07  Score=66.64  Aligned_cols=37  Identities=27%  Similarity=0.456  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||.|.+|++.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG   40 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCS
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCC
Confidence            68889987  99999999999999999999999997654

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.18  E-value=6.2e-07  Score=65.79  Aligned_cols=36  Identities=22%  Similarity=0.455  Sum_probs=32.6

Q ss_pred             cccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          387 GVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       387 H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      |+++|++  ||.|.+|++.|.+.+.|.+|+++|+++..
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   38 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSG   38 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSS
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            6778887  99999999999999999999999997653

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.18  E-value=5.7e-07  Score=66.66  Aligned_cols=37  Identities=22%  Similarity=0.370  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|++.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESG   40 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCC
Confidence            68889997  99999999999999999999999997754

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.18  E-value=7.7e-07  Score=66.71  Aligned_cols=37  Identities=19%  Similarity=0.260  Sum_probs=34.1

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||.|.+|+|.|.+.+.|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP   40 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            68889997  99999999999999999999999997754

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.18  E-value=6.2e-07  Score=67.39  Aligned_cols=38  Identities=26%  Similarity=0.409  Sum_probs=34.5

Q ss_pred             CccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          385 GDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       385 k~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .+|+++|++  ||.|.+|++.|.+...|.+|+++|+++..
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytj_A            1 GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKP   40 (46)
T ss_dssp             CCSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCC
T ss_pred             CCcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCC
Confidence            368889997  99999999999999999999999997754

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.18  E-value=6.8e-07  Score=67.16  Aligned_cols=37  Identities=24%  Similarity=0.403  Sum_probs=34.1

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||.|.+|+|.|.++..|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKP   40 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            68889997  99999999999999999999999997754

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.18  E-value=8.8e-07  Score=66.53  Aligned_cols=37  Identities=19%  Similarity=0.342  Sum_probs=34.0

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||+|..|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKP   40 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            68889997  99999999999999999999999997754

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=7.9e-07  Score=66.78  Aligned_cols=38  Identities=21%  Similarity=0.366  Sum_probs=34.4

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCS
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCC
Confidence            58889987  999999999999999999999999987643

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=7.5e-07  Score=66.27  Aligned_cols=38  Identities=21%  Similarity=0.391  Sum_probs=34.2

Q ss_pred             CccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          385 GDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       385 k~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +.|+++|++  ||.|..|++.|.+...|..|+++|+++..
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (44)
T 2emb_A            1 GSSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSG   40 (44)
T ss_dssp             CCCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCC
T ss_pred             CCcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCC
Confidence            368889997  99999999999999999999999997654

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=8.6e-07  Score=66.72  Aligned_cols=38  Identities=18%  Similarity=0.358  Sum_probs=34.4

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPS   41 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCC
Confidence            58888997  999999999999999999999999987643

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=9.1e-07  Score=66.45  Aligned_cols=37  Identities=27%  Similarity=0.493  Sum_probs=34.0

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKP   40 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCC
Confidence            58889987  99999999999999999999999997754

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=6.4e-07  Score=66.53  Aligned_cols=37  Identities=24%  Similarity=0.372  Sum_probs=33.7

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+++|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSG   40 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCS
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCC
Confidence            58889997  99999999999999999999999997653

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=9.8e-07  Score=66.27  Aligned_cols=38  Identities=26%  Similarity=0.350  Sum_probs=34.2

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPS   41 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCS
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCC
Confidence            58888987  999999999999999999999999987543

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=7.6e-07  Score=66.88  Aligned_cols=38  Identities=26%  Similarity=0.514  Sum_probs=34.5

Q ss_pred             CccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          385 GDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       385 k~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +.|+++|++  ||.|.+|++.|.+...|.+|+++|+++..
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ep2_A            1 GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKP   40 (46)
T ss_dssp             CCSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCS
T ss_pred             CCCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            368889997  99999999999999999999999998754

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.17  E-value=7.7e-07  Score=66.71  Aligned_cols=38  Identities=24%  Similarity=0.377  Sum_probs=34.4

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPS   41 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSS
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            58888987  999999999999999999999999987643

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=1.1e-06  Score=66.04  Aligned_cols=38  Identities=21%  Similarity=0.434  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      .|+++|++  ||.|.+|+|.|.++..|.+|+++|+++...
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPS   41 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCC
Confidence            47788887  999999999999999999999999987643

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=7.5e-07  Score=66.77  Aligned_cols=38  Identities=21%  Similarity=0.383  Sum_probs=34.3

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      +|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSS
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCC
Confidence            58889997  999999999999999999999999977543

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=8.6e-07  Score=66.44  Aligned_cols=37  Identities=24%  Similarity=0.293  Sum_probs=34.0

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENP   40 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            68889997  99999999999999999999999997754

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=7.9e-07  Score=65.49  Aligned_cols=36  Identities=19%  Similarity=0.422  Sum_probs=32.8

Q ss_pred             cccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          387 GVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       387 H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      |+++|++  ||.|.+|+++|.+.+.|.+|+++|+++..
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   39 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGP   39 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSS
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            7788887  99999999999999999999999997653

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=9.1e-07  Score=66.45  Aligned_cols=37  Identities=27%  Similarity=0.469  Sum_probs=34.1

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKP   40 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCC
Confidence            68889997  99999999999999999999999998754

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.16  E-value=8.3e-07  Score=66.67  Aligned_cols=37  Identities=30%  Similarity=0.512  Sum_probs=34.0

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|++.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKP   40 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCS
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCC
Confidence            68889997  99999999999999999999999997754

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=6.5e-07  Score=67.39  Aligned_cols=38  Identities=18%  Similarity=0.306  Sum_probs=34.5

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      +|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHS   41 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBT
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCC
Confidence            68889987  999999999999999999999999987643

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.15  E-value=6.5e-07  Score=72.55  Aligned_cols=51  Identities=25%  Similarity=0.515  Sum_probs=41.4

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcCccccCCchhhhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHV  414 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~  414 (790)
                      ..|.+++||.|+.|++.|.....|.   +                     +|++  ||.|..|++.|....++..|.
T Consensus         7 ~~H~~~k~~~C~~C~k~F~~~~~l~---~---------------------~H~~~k~~~C~~C~k~f~~~~~~~~~~   59 (62)
T 1vd4_A            7 RDSTNRASFKCPVCSSTFTDLEANQ---L---------------------FDPMTGTFRCTFCHTEVEEDESAMPKK   59 (62)
T ss_dssp             SSCCSSSEEECSSSCCEEEHHHHHH---H---------------------EETTTTEEBCSSSCCBCEECTTCSCCC
T ss_pred             HHcCCCCCccCCCCCchhccHHHhH---h---------------------hcCCCCCEECCCCCCccccCccccccc
Confidence            4466789999999999999887774   2                     3554  999999999999988876554

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=6e-07  Score=67.46  Aligned_cols=39  Identities=23%  Similarity=0.301  Sum_probs=34.8

Q ss_pred             CccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          385 GDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       385 k~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      ..|+++|++  ||.|.+|++.|.+...|.+|+++|+++..-
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   41 (46)
T 2en3_A            1 GSSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPS   41 (46)
T ss_dssp             CCCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCS
T ss_pred             CccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCC
Confidence            368889987  999999999999999999999999977643

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=1e-06  Score=66.35  Aligned_cols=37  Identities=27%  Similarity=0.433  Sum_probs=33.8

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.++..|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKP   40 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            58888987  99999999999999999999999997754

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.15  E-value=5.8e-07  Score=67.67  Aligned_cols=38  Identities=24%  Similarity=0.405  Sum_probs=34.5

Q ss_pred             CccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          385 GDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       385 k~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +.|+++|++  ||.|.+|+|.|.+.+.|..|+++|+++..
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2eoo_A            1 GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKS   40 (46)
T ss_dssp             CCCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTS
T ss_pred             CCCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCC
Confidence            468899997  99999999999999999999999997654

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.15  E-value=7.2e-07  Score=67.16  Aligned_cols=38  Identities=26%  Similarity=0.372  Sum_probs=34.3

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSS
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            58889997  999999999999999999999999977543

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.14  E-value=1e-06  Score=66.45  Aligned_cols=38  Identities=21%  Similarity=0.389  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPS   41 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCC
Confidence            47888987  999999999999999999999999977543

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.14  E-value=8e-07  Score=66.89  Aligned_cols=37  Identities=22%  Similarity=0.394  Sum_probs=34.0

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||.|.+|+|.|.++..|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKP   40 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            68889997  99999999999999999999999997754

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.14  E-value=9.6e-07  Score=66.17  Aligned_cols=38  Identities=24%  Similarity=0.429  Sum_probs=34.4

Q ss_pred             CccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          385 GDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       385 k~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +.|+++|++  ||.|.+|++.|.....|.+|+++|+++..
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eme_A            1 GSSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKP   40 (46)
T ss_dssp             CCCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSC
T ss_pred             CCCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCC
Confidence            368889997  99999999999999999999999997654

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.14  E-value=6e-07  Score=67.60  Aligned_cols=38  Identities=21%  Similarity=0.463  Sum_probs=34.4

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      +|+++|++  ||.|.+|++.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLS   41 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSS
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCC
Confidence            58889997  999999999999999999999999987543

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.14  E-value=1.1e-06  Score=65.88  Aligned_cols=37  Identities=22%  Similarity=0.410  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKP   40 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCS
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            68889997  99999999999999999999999997654

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=9.3e-07  Score=66.52  Aligned_cols=38  Identities=21%  Similarity=0.350  Sum_probs=34.4

Q ss_pred             CccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          385 GDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       385 k~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .+|+++|++  ||.|.+|++.|.+...|.+|+++|+++..
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2em5_A            1 GSSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKP   40 (46)
T ss_dssp             CCCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCC
T ss_pred             CCCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCC
Confidence            368889997  99999999999999999999999997754

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=7.9e-07  Score=66.91  Aligned_cols=38  Identities=21%  Similarity=0.306  Sum_probs=34.3

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      .|+++|++  ||+|.+|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPS   41 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            58888997  999999999999999999999999987643

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.14  E-value=8.8e-07  Score=66.52  Aligned_cols=37  Identities=24%  Similarity=0.466  Sum_probs=34.0

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKP   40 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCC
Confidence            58889997  99999999999999999999999997754

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.14  E-value=9e-07  Score=66.33  Aligned_cols=37  Identities=22%  Similarity=0.267  Sum_probs=34.0

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKH   40 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            68889997  99999999999999999999999997754

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.14  E-value=6.4e-07  Score=66.67  Aligned_cols=37  Identities=22%  Similarity=0.327  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|++.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSG   40 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCC
Confidence            68889997  99999999999999999999999997654

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=6.8e-07  Score=67.00  Aligned_cols=38  Identities=21%  Similarity=0.345  Sum_probs=34.4

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      +|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPS   41 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCS
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCC
Confidence            58889987  999999999999999999999999987543

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=9e-07  Score=66.32  Aligned_cols=37  Identities=19%  Similarity=0.282  Sum_probs=34.0

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|++.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKP   40 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCC
Confidence            58889997  99999999999999999999999997654

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=1.1e-06  Score=65.73  Aligned_cols=37  Identities=22%  Similarity=0.415  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKP   40 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            58889997  99999999999999999999999997654

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.13  E-value=8.5e-07  Score=66.46  Aligned_cols=38  Identities=26%  Similarity=0.439  Sum_probs=34.3

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      +|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPS   41 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCC
Confidence            58889997  999999999999999999999999987543

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=1e-06  Score=66.03  Aligned_cols=37  Identities=19%  Similarity=0.246  Sum_probs=34.0

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||.|.+|++.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKC   40 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCS
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCC
Confidence            68889997  99999999999999999999999998754

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.12  E-value=9.5e-07  Score=66.33  Aligned_cols=37  Identities=24%  Similarity=0.399  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKP   40 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            58888997  99999999999999999999999997754

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.12  E-value=1.2e-06  Score=65.54  Aligned_cols=41  Identities=17%  Similarity=0.236  Sum_probs=34.0

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCH  401 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CG  401 (790)
                      +.+++||.|.+|++.|..+..|.+|++ .|.+                  .+||.|+.||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~------------------~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDG------------------SVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHH-HHSC------------------CCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHH-HccC------------------CCCCCCcCCC
Confidence            556799999999999999999999988 3431                  1299999997

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.11  E-value=1.1e-06  Score=65.94  Aligned_cols=37  Identities=24%  Similarity=0.415  Sum_probs=33.8

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+.+.|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKP   40 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCC
Confidence            58889987  99999999999999999999999997654

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.11  E-value=9.2e-07  Score=66.27  Aligned_cols=37  Identities=24%  Similarity=0.414  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||+|.+|++.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKP   40 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCS
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCC
Confidence            58889997  99999999999999999999999997754

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.11  E-value=1.5e-06  Score=65.42  Aligned_cols=37  Identities=16%  Similarity=0.314  Sum_probs=33.6

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|..|+|.|.+...|.+|+++|+++..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKT   40 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCC
Confidence            47888987  99999999999999999999999997654

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.11  E-value=8.6e-07  Score=66.58  Aligned_cols=37  Identities=22%  Similarity=0.380  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||.|.+|+|+|.++..|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKP   40 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCC
Confidence            68889997  99999999999999999999999997654

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=1.3e-06  Score=65.74  Aligned_cols=37  Identities=24%  Similarity=0.349  Sum_probs=33.5

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhcccccc-Ccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVR-NYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtg-E~~  422 (790)
                      .|+++|++  ||.|.+|+|+|.+...|.+|+++|++ +..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~   41 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKS   41 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTT
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCC
Confidence            58888987  99999999999999999999999997 543

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.11  E-value=1.2e-06  Score=65.69  Aligned_cols=37  Identities=27%  Similarity=0.412  Sum_probs=33.7

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKP   40 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCC
Confidence            47888987  99999999999999999999999997754

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.11  E-value=1e-06  Score=66.13  Aligned_cols=38  Identities=24%  Similarity=0.483  Sum_probs=34.3

Q ss_pred             CccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          385 GDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       385 k~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ..|+++|++  ||.|.+|++.|.+...|.+|+++|+++..
T Consensus         1 ~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2en1_A            1 GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKP   40 (46)
T ss_dssp             CCSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCC
T ss_pred             CCcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            368889997  99999999999999999999999997654

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.10  E-value=9.4e-07  Score=66.36  Aligned_cols=37  Identities=24%  Similarity=0.443  Sum_probs=34.0

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||.|..|+|.|.++..|.+|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKP   40 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCC
Confidence            68889997  99999999999999999999999997754

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.10  E-value=1.1e-06  Score=65.83  Aligned_cols=37  Identities=22%  Similarity=0.312  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||.|.+|++.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERH   40 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSS
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCC
Confidence            68889997  99999999999999999999999997654

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.10  E-value=1.4e-06  Score=65.21  Aligned_cols=37  Identities=19%  Similarity=0.273  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKP   40 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCC
Confidence            58889997  99999999999999999999999997654

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.10  E-value=8.8e-07  Score=66.65  Aligned_cols=38  Identities=29%  Similarity=0.529  Sum_probs=34.4

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      .|+++|++  ||+|.+|++.|.+...|.+|+++|+++..-
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~   41 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSS   41 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            58889997  999999999999999999999999977543

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.10  E-value=1e-06  Score=66.23  Aligned_cols=38  Identities=24%  Similarity=0.380  Sum_probs=34.3

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..-
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPS   41 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCC
Confidence            58888997  999999999999999999999999987643

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.09  E-value=6.8e-07  Score=65.74  Aligned_cols=36  Identities=22%  Similarity=0.361  Sum_probs=32.8

Q ss_pred             cccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          387 GVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       387 H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      |+++|++  ||.|..|+++|.+...|.+|+++|+++..
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   39 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGP   39 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCS
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCC
Confidence            7788887  99999999999999999999999987653

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.09  E-value=8.5e-07  Score=66.60  Aligned_cols=37  Identities=24%  Similarity=0.416  Sum_probs=34.0

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKP   40 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            58889997  99999999999999999999999997754

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.09  E-value=9.5e-07  Score=66.34  Aligned_cols=37  Identities=22%  Similarity=0.412  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKP   40 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCC
Confidence            58889997  99999999999999999999999997654

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.09  E-value=9.6e-07  Score=66.17  Aligned_cols=37  Identities=22%  Similarity=0.295  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||.|.+|+|.|.++..|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKP   40 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCT
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCC
Confidence            58889997  99999999999999999999999997654

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.09  E-value=1.2e-06  Score=65.88  Aligned_cols=37  Identities=27%  Similarity=0.384  Sum_probs=33.7

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.++..|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKP   40 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSS
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCC
Confidence            48888997  99999999999999999999999997654

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.09  E-value=2.4e-06  Score=64.15  Aligned_cols=42  Identities=17%  Similarity=0.205  Sum_probs=33.9

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.+                  .+||+|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~k~~~C~~C   46 (46)
T 2epz_A            5 SSGTGEKPFDCIDCGKAFSDHIGLNQHRR-IHTG------------------EKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCSBCCTTTCCCBSSHHHHHHHHT-TTTT------------------CCCCSSCCC
T ss_pred             CCcCCCCCeECCCCCceeCCHHHHHHHHH-HhCC------------------CCCCCCCCC
Confidence            44667899999999999999999999977 3331                  128999887

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.09  E-value=9.2e-07  Score=64.87  Aligned_cols=36  Identities=19%  Similarity=0.243  Sum_probs=32.6

Q ss_pred             cccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          387 GVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       387 H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      |+++|++  ||.|.+|++.|.++..|.+|+++|+++..
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~   39 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP   39 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCC
Confidence            6788887  99999999999999999999999997653

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.09  E-value=9e-07  Score=66.46  Aligned_cols=37  Identities=22%  Similarity=0.299  Sum_probs=34.0

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +|+++|++  ||.|.+|+|.|.+.+.|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKP   40 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            68889997  99999999999999999999999997654

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.09  E-value=8.9e-07  Score=66.36  Aligned_cols=37  Identities=22%  Similarity=0.390  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   40 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKP   40 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCC
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCC
Confidence            58888987  99999999999999999999999997754

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.08  E-value=1.4e-06  Score=65.43  Aligned_cols=37  Identities=24%  Similarity=0.348  Sum_probs=33.7

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKP   40 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCC
Confidence            47888987  99999999999999999999999997654

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.08  E-value=1.5e-06  Score=65.38  Aligned_cols=37  Identities=19%  Similarity=0.285  Sum_probs=33.6

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.++..|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKP   40 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCS
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCC
Confidence            47888987  99999999999999999999999997654

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.08  E-value=2.4e-06  Score=64.26  Aligned_cols=40  Identities=13%  Similarity=0.204  Sum_probs=33.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~C  400 (790)
                      ..+.+++||.|..|++.|...+.|.+|++ .                    |++  ||+|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~--------------------H~~~~~~~C~~C   46 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQR-V--------------------HMGEKTSGPSSG   46 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGG-G--------------------GGSCCCCCSCCC
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHH-h--------------------cCCCCCCCCCCC
Confidence            44667899999999999999999999977 3                    443  9999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.08  E-value=2.4e-06  Score=64.19  Aligned_cols=42  Identities=14%  Similarity=0.211  Sum_probs=34.2

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||+|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~k~~~C~~C   46 (46)
T 2ely_A            5 SSGTGEKPFKCVECGKGFSRRSALNVHHK-LHTG------------------EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSTTHHHHHHH-HHSC------------------CSSCSCCCC
T ss_pred             CCCCCCCCcccCccCcccCCHHHHHHHHH-HcCC------------------CCCCCCCCC
Confidence            44567899999999999999999999988 4431                  138999887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.08  E-value=2.6e-06  Score=63.76  Aligned_cols=42  Identities=17%  Similarity=0.314  Sum_probs=34.0

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.+                  .+||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~C   46 (46)
T 2eq4_A            5 SSGTGEKLYNCKECGKSFSRAPCLLKHER-LHSG------------------EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCBTTTTBCCSCHHHHHHHHH-HCCS------------------SSCCCCCCC
T ss_pred             ccCCCCCCeECCCCCCccCchHHHHHHHH-hcCC------------------CCCCCCCCC
Confidence            34567899999999999999999999987 3331                  129999887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.08  E-value=1e-06  Score=65.52  Aligned_cols=36  Identities=25%  Similarity=0.427  Sum_probs=33.0

Q ss_pred             cccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          387 GVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       387 H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      |+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   38 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKP   38 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCS
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            6788887  99999999999999999999999997754

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.08  E-value=2.7e-06  Score=63.93  Aligned_cols=42  Identities=17%  Similarity=0.293  Sum_probs=34.0

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||+|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~------------------~k~~~C~~C   46 (46)
T 2emk_A            5 SSGTGEKPYECKECGKAFSQTTHLIQHQR-VHTG------------------EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCSCBCSSSCCBCSCHHHHHHHHH-HHSS------------------CCCSSCCCC
T ss_pred             CccCCCCceECCCCCchhCCHHHHHHHHH-HcCC------------------CCCCCCCCC
Confidence            34567899999999999999999999988 4432                  128999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.08  E-value=2.6e-06  Score=64.04  Aligned_cols=42  Identities=14%  Similarity=0.236  Sum_probs=33.8

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||+|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~k~~~C~~C   46 (46)
T 2ytq_A            5 SSGAGEKPYGCSECGKAFSSKSYLIIHMR-THSG------------------EKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSCBCSSSCCBCSCHHHHHHHHT-TTCC------------------SCSSCCCCC
T ss_pred             cCcCCCCCcCCCccChhhCChHHHHHHHH-HhCC------------------CCCCCCCCC
Confidence            34567899999999999999999999977 3331                  128999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.07  E-value=2.4e-06  Score=63.95  Aligned_cols=42  Identities=14%  Similarity=0.209  Sum_probs=34.1

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~k~~~C~~C   46 (46)
T 2emm_A            5 SSGTGERPHKCNECGKSFIQSAHLIQHQR-IHTG------------------EKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHH-HHSC------------------CCTTSSSCC
T ss_pred             CCcCCCCCeeCCCCChhhCCHHHHHHHHH-HhCC------------------CCCCCCCCC
Confidence            34567899999999999999999999987 4431                  128999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.07  E-value=2.5e-06  Score=63.99  Aligned_cols=42  Identities=19%  Similarity=0.304  Sum_probs=34.1

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||+|.+|++.|...+.|.+|++ .|.+                  .+||+|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~------------------~k~~~C~~C   46 (46)
T 2emy_A            5 SSGTGENPYECHECGKAFSRKYQLISHQR-THAG------------------EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHH-HHTT------------------SCCSCSSCC
T ss_pred             CCCCCCcCcCCCCCCcccCcHHHHHHHHH-HcCC------------------CCCCCCCCC
Confidence            34567899999999999999999999988 4432                  138999887

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.06  E-value=3e-06  Score=63.45  Aligned_cols=42  Identities=14%  Similarity=0.175  Sum_probs=33.9

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||+|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~C   46 (46)
T 2eov_A            5 SSGTGEKPYKCSDCGKSFTWKSRLRIHQK-CHTG------------------ERHSGPSSG   46 (46)
T ss_dssp             CCCSSCCSCBCSSSCCBCSSHHHHHHHHH-HHSC------------------CSSCCSCCC
T ss_pred             CCCCCCCCccCCccChhhCCHHHHHHHHH-hcCC------------------CCCCCCCCC
Confidence            34567899999999999999999999987 4431                  128999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.06  E-value=1.2e-06  Score=65.72  Aligned_cols=37  Identities=27%  Similarity=0.463  Sum_probs=34.0

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRP   40 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCS
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCC
Confidence            58889987  99999999999999999999999998754

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.06  E-value=2.6e-06  Score=63.92  Aligned_cols=40  Identities=15%  Similarity=0.283  Sum_probs=33.6

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++                     +|++  ||.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~---------------------~H~~~k~~~C~~C   46 (46)
T 2ytn_A            5 SSGTGKKPYKCNECGKVFTQNSHLARHRG---------------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCSSCBCTTTCCBCSSHHHHHHHGG---------------------GTSCCCCCSCCCC
T ss_pred             cCCCCCcCeECCCCCCeeCCHHHHHHHhh---------------------hcCCCCCCCCCCC
Confidence            34567899999999999999999999976                     3444  9999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.06  E-value=2.4e-06  Score=64.24  Aligned_cols=40  Identities=25%  Similarity=0.312  Sum_probs=33.6

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~C  400 (790)
                      ..+.+++||+|.+|++.|.....|.+|++                     +|++  ||+|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~---------------------~H~~~k~~~C~~c   46 (46)
T 2emf_A            5 SSGTGGKHFECTECGKAFTRKSTLSMHQK---------------------IHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSSSCCEECSSSCCEESCHHHHHHHGG---------------------GTSCSSCSCCCCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHHH---------------------HhCCCCCCCCCCC
Confidence            34567899999999999999999999977                     3444  9999887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.06  E-value=2.4e-06  Score=63.52  Aligned_cols=41  Identities=22%  Similarity=0.255  Sum_probs=33.6

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      .+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||.|.+|
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~C   44 (44)
T 2emx_A            4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQ-THAE------------------EKPSGPSSG   44 (44)
T ss_dssp             CCSSCCCEECSSSSCEESSHHHHHHHHH-HHTS------------------SCSCSCCCC
T ss_pred             CcCCCcCccCCCCCcccCCHHHHHHHHH-HhCC------------------CCCCCCCCC
Confidence            4567899999999999999999999988 4432                  128999887

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.06  E-value=2.5e-06  Score=64.03  Aligned_cols=42  Identities=12%  Similarity=0.213  Sum_probs=33.8

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||+|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~k~~~C~~C   46 (46)
T 2ene_A            5 SSGTGEKPYKCNECGKVFRHNSYLSRHQR-IHTG------------------EKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSSEECSSSCCEESSHHHHHHHHT-TTCC------------------CCCCSCCCC
T ss_pred             cCCCCCCCeECCCCCchhCChHHHHHHHh-hcCC------------------CCCCCCCCC
Confidence            34567899999999999999999999977 3331                  129999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.06  E-value=2.7e-06  Score=63.85  Aligned_cols=42  Identities=12%  Similarity=0.247  Sum_probs=34.0

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|..|++.|...+.|.+|++ .|.+                  .+||.|++|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~c   46 (46)
T 2ytk_A            5 SSGSGEKPYKCNECGKVFTQNSHLTNHWR-IHTG------------------EKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCSEECSSSCCEESSHHHHHHHHH-HHSS------------------SSCSSCCCC
T ss_pred             ccCCCCCCEeCCcCCCccCCHHHHHHHHH-HHCC------------------CCCCCCCCC
Confidence            34567899999999999999999999988 4431                  128999887

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.06  E-value=3e-06  Score=63.55  Aligned_cols=42  Identities=14%  Similarity=0.214  Sum_probs=33.8

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||+|.+|++.|...+.|.+|++ .|.+                  .+||.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~C   46 (46)
T 2eml_A            5 SSGTGEKPYECSVCGKAFSHRQSLSVHQR-IHSG------------------KKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHG-GGSS------------------CCCSCSSCC
T ss_pred             CCcCCCCCeeCCCcCCccCCHHHHHHHHH-HhcC------------------CCCCCCCCC
Confidence            34567899999999999999999999987 3331                  128999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.06  E-value=3.1e-06  Score=63.44  Aligned_cols=42  Identities=14%  Similarity=0.228  Sum_probs=33.9

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||.|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~k~~~C~~C   46 (46)
T 2eoq_A            5 SSGTGEKPFKCDICGKSFCGRSRLNRHSM-VHTA------------------EKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCSCCCSSSCCCCSSHHHHHHHHH-HTTC------------------CCSSSCCCC
T ss_pred             CCCCCCCCcCCCcCCchhCCHHHHHHHHH-HcCC------------------CCCCCCCCC
Confidence            34567899999999999999999999987 3431                  128999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=2.9e-06  Score=63.53  Aligned_cols=42  Identities=12%  Similarity=0.252  Sum_probs=33.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.+                  .+||.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~C   46 (46)
T 2ytr_A            5 SSGTGEKPYKCNECGKAFSQTSKLARHQR-IHTG------------------EKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCTTCCTTTCCCCSSHHHHHHHHT-TTTT------------------CSCCCSCCC
T ss_pred             cCCCCCcCcCCCCCCCccCCHHHHHHHHH-hcCC------------------CCCCCCCCC
Confidence            34567899999999999999999999977 3331                  129999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.05  E-value=2.9e-06  Score=63.62  Aligned_cols=40  Identities=15%  Similarity=0.279  Sum_probs=33.6

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~C  400 (790)
                      ..+.+++||+|..|++.|...+.|.+|++                     +|++  ||+|+.|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~---------------------~H~~~~~~~C~~C   46 (46)
T 2em0_A            5 SSGMGEKTWKCRECDMCFSQASSLRLHQN---------------------VHVGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCCCCCSSSCCCCSSHHHHHHHGG---------------------GGSSSSCSCSSCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHH---------------------HcCCCCCcCCCCC
Confidence            34567899999999999999999999976                     3444  9999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=2.4e-06  Score=64.33  Aligned_cols=42  Identities=14%  Similarity=0.252  Sum_probs=34.3

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||+|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~C   46 (46)
T 2ytm_A            5 SSGTGEKPYKCMECGKAFGDNSSCTQHQR-LHTG------------------QRPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSSSBTTTTBCCSSHHHHHHHHH-HHHS------------------CCCCCCCCC
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHH-HcCC------------------CCCCCCCCC
Confidence            44667899999999999999999999988 4432                  138999887

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=3e-06  Score=63.44  Aligned_cols=29  Identities=17%  Similarity=0.338  Sum_probs=25.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||+|.+|++.|.....|.+|++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eop_A            5 SSGTGEKPHECRECGKSFSFNSQLIVHQR   33 (46)
T ss_dssp             CSCCCCCSCBCTTTCCBCSSHHHHHHHHT
T ss_pred             cccCCCCCeeCCCCCchhCCHHHHHHHHH
Confidence            34567899999999999999999999977

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.05  E-value=1.8e-06  Score=64.94  Aligned_cols=37  Identities=24%  Similarity=0.422  Sum_probs=33.8

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKP   40 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            57888987  99999999999999999999999997654

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=2.6e-06  Score=63.90  Aligned_cols=42  Identities=17%  Similarity=0.320  Sum_probs=33.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~------------------~k~~~C~~c   46 (46)
T 2eq0_A            5 SSGTGEKPYKCHECGKVFRRNSHLARHQL-IHTG------------------EKPSGPSSG   46 (46)
T ss_dssp             CCTTCCCCEECTTTCCEESSHHHHHHHHT-TTCC------------------CCCSCCSCC
T ss_pred             cCCCCCCCeECCCCCchhCCHHHHHHHHH-HcCC------------------CCCCCCCCC
Confidence            34567899999999999999999999977 3331                  129999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.05  E-value=3.2e-06  Score=63.37  Aligned_cols=40  Identities=18%  Similarity=0.248  Sum_probs=33.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .                    |++  ||.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~--------------------H~~~k~~~C~~c   46 (46)
T 2ep2_A            5 SSGTGEKPYECSICGKSFTKKSQLHVHQQ-I--------------------HTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHH-T--------------------TSSCCSCCSCCC
T ss_pred             CCCCCCcCcCCCCCCcccCCHHHHHHHHH-H--------------------hCCCCCCCCCCC
Confidence            34567899999999999999999999987 3                    444  8999887

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.05  E-value=2.9e-06  Score=63.67  Aligned_cols=42  Identities=14%  Similarity=0.245  Sum_probs=33.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||+|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~k~~~C~~c   46 (46)
T 2ema_A            5 SSGTGEKRYKCNECGKVFSRNSQLSQHQK-IHTG------------------EKPSGPSSG   46 (46)
T ss_dssp             SSCTTSCCEECSSSCCEESSHHHHHHHHT-GGGC------------------CCCCSSSCC
T ss_pred             cCCCCCcCcCCCCCcchhCCHHHHHHHHH-hcCC------------------CCCCCCCCC
Confidence            34567899999999999999999999977 3331                  128999887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.04  E-value=3.1e-06  Score=63.49  Aligned_cols=29  Identities=14%  Similarity=0.370  Sum_probs=25.9

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytj_A            5 SSGTGEKPYICAECGKAFTIRSNLIKHQK   33 (46)
T ss_dssp             CTTSSCCSEECSSSCCEESSHHHHHHHHH
T ss_pred             cCCCCCcCeECCCCChhhCCHHHHHHHHH
Confidence            34567899999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=2.7e-06  Score=63.84  Aligned_cols=40  Identities=13%  Similarity=0.242  Sum_probs=33.6

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|.....|.+|++                     +|++  ||.|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~---------------------~H~~~k~~~C~~C   46 (46)
T 2em7_A            5 SSGTGEKPYKCEECGKGFICRRDLYTHHM---------------------VHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCCCSEECSSSCCEESCHHHHHHHGG---------------------GGTTCCCSSTTCC
T ss_pred             CCCCCCcCccCCCccchhCCHHHHHHHHH---------------------HhCCCCCCCCCCC
Confidence            34567899999999999999999999976                     3444  9999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.04  E-value=2.4e-06  Score=64.11  Aligned_cols=40  Identities=15%  Similarity=0.188  Sum_probs=33.9

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .                    |++  ||+|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~--------------------H~~~~~~~C~~C   46 (46)
T 2ysp_A            5 SSGTGEKPYKCEKCGKGYNSKFNLDMHQK-V--------------------HTGERPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESCHHHHHHHHT-T--------------------SCSCCSSCCSCC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHH-h--------------------hCCCCCCCCCCC
Confidence            44667899999999999999999999977 3                    444  8999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.04  E-value=2.9e-06  Score=63.54  Aligned_cols=40  Identities=13%  Similarity=0.256  Sum_probs=33.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~C  400 (790)
                      ..+.+++||+|..|++.|...+.|.+|++ .                    |++  ||.|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~--------------------H~~~~~~~C~~C   46 (46)
T 2eoe_A            5 SSGTGEKPYKCNECGKVFTQNSHLANHQR-I--------------------HTGVKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCSSEETTTTEECSSHHHHHHHHG-G--------------------GSCCCSCSSCCC
T ss_pred             CCCCCCCCeECCCcChhhCCHHHHHHHHH-H--------------------cCCCCCCCCCCC
Confidence            34566899999999999999999999987 3                    444  9999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.04  E-value=2.7e-06  Score=63.65  Aligned_cols=40  Identities=18%  Similarity=0.218  Sum_probs=33.6

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++                     +|++  ||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~---------------------~H~~~k~~~C~~C   46 (46)
T 2el4_A            5 SSGTGVKPYGCSQCAKTFSLKSQLIVHQR---------------------SHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHGG---------------------GSSSCCCSCCTTC
T ss_pred             cCCCCCCceECCCCCchhCCHHHHHHHHH---------------------HhCCCCCCCCCCC
Confidence            34567899999999999999999999976                     3444  9999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=1.7e-06  Score=64.94  Aligned_cols=37  Identities=22%  Similarity=0.311  Sum_probs=33.7

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKP   40 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCC
Confidence            57888987  99999999999999999999999997754

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.04  E-value=1.5e-06  Score=65.42  Aligned_cols=37  Identities=24%  Similarity=0.459  Sum_probs=33.8

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKP   40 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCS
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCC
Confidence            58888987  99999999999999999999999997754

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.04  E-value=1.2e-06  Score=65.82  Aligned_cols=37  Identities=19%  Similarity=0.363  Sum_probs=33.9

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKP   40 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCC
Confidence            68889997  99999999999999999999999997754

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=3.2e-06  Score=63.38  Aligned_cols=42  Identities=14%  Similarity=0.180  Sum_probs=33.9

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||+|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~C   46 (46)
T 2enc_A            5 SSGSGEKPFKCEECGKGFYTNSQCYSHQR-SHSG------------------EKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCSEECSSSCCEESSHHHHHHHHH-HSCC------------------SSCCSSCCC
T ss_pred             CCCCCCCCcCCCCCCCcCCChHHHHHHHH-HhCC------------------CCCCCCCCC
Confidence            34567899999999999999999999987 3331                  128999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.03  E-value=3e-06  Score=63.68  Aligned_cols=42  Identities=19%  Similarity=0.230  Sum_probs=33.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||.|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~C   46 (46)
T 2em5_A            5 SSGSSTKSHQCHECGRGFTLKSHLNQHQR-IHTG------------------EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCSEECSSSCCEESSHHHHHHHHT-TTSC------------------SCCSSCCCC
T ss_pred             CCCCCCCCeECCcCCCccCCHHHHHHHHH-HhCC------------------CCCCCCCCC
Confidence            34567899999999999999999999977 3331                  128999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.03  E-value=3.1e-06  Score=63.47  Aligned_cols=42  Identities=12%  Similarity=0.168  Sum_probs=34.0

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.+                  .+||+|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~C   46 (46)
T 2ytd_A            5 SSGSGEKPYKCSECGKAFHRHTHLNEHRR-IHTG------------------YRPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSHHHHHHHHH-HHTC------------------CCSSCSSCC
T ss_pred             cccCCCcCeECCCCCCeeCChHHHHHHHH-HcCC------------------CCCCCCCCC
Confidence            34567899999999999999999999987 4431                  128999887

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.03  E-value=3e-06  Score=63.45  Aligned_cols=40  Identities=15%  Similarity=0.268  Sum_probs=33.6

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|.....|.+|++                     +|++  ||+|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~---------------------~H~~~~~~~C~~C   46 (46)
T 2em9_A            5 SSGTGEKPYNCKECGKSFRWASCLLKHQR---------------------VHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHGG---------------------GGTSCCCCSTTCC
T ss_pred             CCCCCCcCeECCccccccCChHHHHHHHH---------------------HhCCCCCCCCCCC
Confidence            44567899999999999999999999976                     3444  8999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.03  E-value=2.6e-06  Score=63.94  Aligned_cols=42  Identities=12%  Similarity=0.240  Sum_probs=34.0

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||.|++|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~------------------~k~~~C~~c   46 (46)
T 2emh_A            5 SSGTGERPYICTVCGKAFTDRSNLIKHQK-IHTG------------------EKPSGPSSG   46 (46)
T ss_dssp             CSCSCCCSEECTTTCCEESSHHHHHHHHH-HHHC------------------SSCSSSCCC
T ss_pred             CCCCCCCCcCCCCCCchhCCHHHHHHHHH-hcCC------------------CCCCCCCCC
Confidence            34567899999999999999999999988 4432                  138999887

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.03  E-value=1.7e-06  Score=64.96  Aligned_cols=37  Identities=16%  Similarity=0.352  Sum_probs=33.7

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERP   40 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCS
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCC
Confidence            58888987  99999999999999999999999997654

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.02  E-value=2.4e-06  Score=64.06  Aligned_cols=37  Identities=22%  Similarity=0.299  Sum_probs=33.7

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhcc-ccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVG-IHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~R-tHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|++ +|+++..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~   41 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKP   41 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCS
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCC
Confidence            58889997  9999999999999999999999 9987654

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.02  E-value=3.4e-06  Score=63.10  Aligned_cols=42  Identities=17%  Similarity=0.146  Sum_probs=33.8

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||.|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~------------------~k~~~C~~C   46 (46)
T 2epw_A            5 SSGTGEKPCKCTECGKAFCWKSQLIMHQR-THVD------------------DKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCSEECSSSCCEESSSHHHHHHHH-HCCS------------------CCCSCCCCC
T ss_pred             ccCCCCCCeeCCCCCCccCCHHHHHHHHH-HhCC------------------CCCCCCCCC
Confidence            34567899999999999999999999987 3331                  128999887

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.02  E-value=1e-06  Score=62.88  Aligned_cols=33  Identities=21%  Similarity=0.463  Sum_probs=29.8

Q ss_pred             cccCC--cccCCcCccccCCchhhhhhccccccCc
Q 003869          389 IIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       389 RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      ++|++  ||.|..|++.|.+...|.+|+++|+++.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            46776  9999999999999999999999999764

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.02  E-value=3.7e-06  Score=63.16  Aligned_cols=42  Identities=21%  Similarity=0.312  Sum_probs=33.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.+                  .+||.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~C   46 (46)
T 2el6_A            5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQR-MHTR------------------EKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCSEECSSSSCEESSHHHHHHHHG-GGCC------------------SSCCSCCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHH-HcCC------------------CCCCCCCCC
Confidence            34567899999999999999999999977 3331                  128999887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.02  E-value=2.8e-06  Score=63.83  Aligned_cols=42  Identities=17%  Similarity=0.293  Sum_probs=34.1

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||+|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~------------------~k~~~C~~C   46 (46)
T 2eoo_A            5 SSGSGERPYGCNECGKNFGRHSHLIEHLK-RHFR------------------EKSSGPSSG   46 (46)
T ss_dssp             CCCSCCCCEECSSSCCEESSHHHHHHHHH-HHHS------------------TTSSCCSCC
T ss_pred             CCCCCCCCEEccccCcccCCHHHHHHHHH-HHcC------------------CCCCCCCCC
Confidence            34567899999999999999999999988 3432                  138999887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.02  E-value=3.3e-06  Score=63.32  Aligned_cols=42  Identities=12%  Similarity=0.198  Sum_probs=33.9

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|..|++.|...+.|.+|++ .|.+                  .+||+|..|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~k~~~C~~C   46 (46)
T 2yso_A            5 SSGSREKSHQCRECGEIFFQYVSLIEHQV-LHMG------------------QKNSGPSSG   46 (46)
T ss_dssp             CCSSCCCCEECTTTCCEESSHHHHHHHHH-HHSC------------------CSCCCTTCC
T ss_pred             cccCCCCCEEccccChhhCCHHHHHHHHH-HhCC------------------CCCCCCCCC
Confidence            34567899999999999999999999987 3431                  128999887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.02  E-value=2.9e-06  Score=63.61  Aligned_cols=42  Identities=17%  Similarity=0.226  Sum_probs=34.1

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||+|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~k~~~C~~C   46 (46)
T 2en6_A            5 SSGSGEKPYGCNECGKTFSQKSILSAHQR-THTG------------------EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCEEETTTTEEESSHHHHHHHHH-HHSS------------------CCCSSSCCC
T ss_pred             CccCCCcCeECCCCCcccCchHHHHHHHH-HcCC------------------CCCCCCCCC
Confidence            34667899999999999999999999988 3431                  128999887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=2.9e-06  Score=63.61  Aligned_cols=42  Identities=12%  Similarity=0.192  Sum_probs=34.1

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||+|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~k~~~C~~C   46 (46)
T 2emp_A            5 SSGTGVKPYMCNECGKAFSVYSSLTTHQV-IHTG------------------EKPSGPSSG   46 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESCHHHHHHHHH-HHHC------------------CSCCSCCCC
T ss_pred             cccCCCcCeECCCCCchhCCHHHHHHHHH-HcCC------------------CCCCCCCCC
Confidence            34567899999999999999999999988 4432                  138999887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=3.9e-06  Score=62.79  Aligned_cols=42  Identities=12%  Similarity=0.173  Sum_probs=33.8

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.+                  .+||+|.+|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~C   46 (46)
T 2eme_A            5 SSGSGEKPYVCDYCGKAFGLSAELVRHQR-IHTG------------------EKPSGPSSG   46 (46)
T ss_dssp             CTTCCCCSEECSSSCCEESSHHHHHHHHG-GGCC------------------CSCCSSCCC
T ss_pred             CCCCCCCCeECCCCChhhCCHHHHHHHHH-hcCC------------------CCCCCCCCC
Confidence            34567899999999999999999999987 3331                  128999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=1.7e-06  Score=64.90  Aligned_cols=37  Identities=14%  Similarity=0.232  Sum_probs=33.7

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKN   40 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCC
Confidence            57888987  99999999999999999999999997654

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=1.9e-06  Score=64.25  Aligned_cols=37  Identities=22%  Similarity=0.282  Sum_probs=33.3

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESG   40 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCC
Confidence            47788887  99999999999999999999999997654

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.01  E-value=3.8e-06  Score=63.01  Aligned_cols=42  Identities=12%  Similarity=0.175  Sum_probs=33.6

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.+                  .+||+|.+|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQR-IHTG------------------EKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHT-TTSS------------------SCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHH-HhCC------------------CCCCCCCCC
Confidence            34567899999999999999999999977 3331                  128999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.00  E-value=1.6e-06  Score=65.31  Aligned_cols=37  Identities=19%  Similarity=0.369  Sum_probs=33.5

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRP   40 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCC
Confidence            47888987  99999999999999999999999997654

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.00  E-value=3.2e-06  Score=63.52  Aligned_cols=42  Identities=10%  Similarity=0.100  Sum_probs=34.1

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.+                  .+||.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~C   46 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQR-VHTG------------------EKLSGPSSG   46 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHH-HHHC------------------CCCCCSCCC
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHH-HHcC------------------CCCCCCCCC
Confidence            34567899999999999999999999988 4432                  138999887

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.99  E-value=3.9e-06  Score=62.77  Aligned_cols=29  Identities=14%  Similarity=0.170  Sum_probs=25.6

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2en8_A            5 SSGSGEKSHTCDECGKNFCYISALRIHQR   33 (46)
T ss_dssp             CCCCCCSSEECTTTCCEESSHHHHHHHHT
T ss_pred             ccCCCCCCeECCCcCcccCCHHHHHHHHH
Confidence            34566899999999999999999999977

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.99  E-value=3e-06  Score=70.16  Aligned_cols=45  Identities=20%  Similarity=0.456  Sum_probs=37.7

Q ss_pred             ccCCcccccCC--CCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcCccccC
Q 003869          342 VQVRDLFECHK--CEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFH  405 (790)
Q Consensus       342 ~q~EKPyeC~~--CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~CGKsFs  405 (790)
                      +..+++|.|.+  |++.|.....|.+|++ .|.+                  .+||.|.+|+++|.
T Consensus        33 H~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           33 HIHQKSFSCPEPACGKSFNFKKHLKEHMK-LHSD------------------TRDYICEFSGPSSG   79 (79)
T ss_dssp             GGSCCCEECSCTTTCCEESSHHHHHHHHH-HHHT------------------SCCCSCCSSSCCCC
T ss_pred             hCCCCCeECCCCCCcCccCCHHHHHHHHH-HhCC------------------CCCeeCCCCCCCCC
Confidence            45679999999  9999999999999988 4431                  13999999999994

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.98  E-value=4.2e-06  Score=62.73  Aligned_cols=29  Identities=14%  Similarity=0.441  Sum_probs=25.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||.|..|++.|...+.|.+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ep3_A            5 SSGTGEKPYRCAECGKAFTDRSNLFTHQK   33 (46)
T ss_dssp             SSSSCCCSEECSSSCCEESSHHHHHHHHT
T ss_pred             CCCCCCCCeECCCCCchhCCHHHHHHHHH
Confidence            34567899999999999999999999977

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=2.8e-06  Score=63.75  Aligned_cols=40  Identities=15%  Similarity=0.286  Sum_probs=33.2

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++                     +|++  ||+|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~---------------------~H~~~k~~~C~~C   46 (46)
T 2ytg_A            5 SSGTGEKPFKCGECGKSYNQRVHLTQHQR---------------------VHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCSEECTTTCCEESSSHHHHTTGG---------------------GGSSCCSSCSCCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHH---------------------HcCCCCCCCCCCC
Confidence            34567899999999999999999988866                     3444  9999988

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.97  E-value=3.1e-06  Score=63.48  Aligned_cols=42  Identities=12%  Similarity=0.213  Sum_probs=33.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.+                  .+||+|..|
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~~~~~C~~C   46 (46)
T 2yu8_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRR-VHTG------------------GKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSEECSSSCCEESSSHHHHHHTH-HHHS------------------CCCSCSCCC
T ss_pred             cCCCCCCCeECCcCCchhCCHHHHHHHHH-hcCC------------------CCCCCCCCC
Confidence            34567899999999999999999999977 4431                  128999887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.96  E-value=2.3e-06  Score=64.37  Aligned_cols=37  Identities=19%  Similarity=0.355  Sum_probs=33.6

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   40 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKL   40 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCC
Confidence            47888887  99999999999999999999999997654

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.95  E-value=4.2e-06  Score=62.77  Aligned_cols=40  Identities=15%  Similarity=0.275  Sum_probs=33.5

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcC
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFC  400 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~C  400 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++                     +|++  ||.|.+|
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~---------------------~H~~~~~~~C~~C   46 (46)
T 2en1_A            5 SSGSGEKPFKCEECGKRFTQNSQLHSHQR---------------------VHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCCCCCSEEETTTTEEESSHHHHHHHGG---------------------GGSCCCCSCCCCC
T ss_pred             cCCCCCCCeeCCCCCcccCCHHHHHHHHH---------------------HcCCCCCCCCCCC
Confidence            34567899999999999999999999976                     3444  9999887

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.95  E-value=3.6e-06  Score=63.22  Aligned_cols=41  Identities=17%  Similarity=0.290  Sum_probs=33.6

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCCcccCCcC
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFC  400 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtGPYkC~~C  400 (790)
                      .+.+++||.|.+|++.|.....|.+|++ .|.+                  .+||.|.+|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~------------------~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWI-THTR------------------EKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHT-HHHH------------------CCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHH-HcCC------------------CCCCCCCCC
Confidence            4567899999999999999999999987 4431                  138999887

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.93  E-value=6.2e-06  Score=61.95  Aligned_cols=32  Identities=22%  Similarity=0.457  Sum_probs=27.2

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   36 (46)
T 2em2_A            5 SSGSGEKPFKCKECGKAFRQNIHLASHLR-IHT   36 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHHH-HHC
T ss_pred             CCCCCCCCEECCcCCchhCCHHHHHHHHH-HhC
Confidence            34567899999999999999999999988 443

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.91  E-value=8.8e-06  Score=60.95  Aligned_cols=29  Identities=17%  Similarity=0.453  Sum_probs=25.6

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (47)
T 2epx_A            5 SSGTGKKPYECIECGKAFIQNTSLIRHWR   33 (47)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSHHHHHHHHT
T ss_pred             cccCCCCCEECCccCchhCChHHHHHHhH
Confidence            44667899999999999999999999965

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.90  E-value=4e-06  Score=63.15  Aligned_cols=37  Identities=22%  Similarity=0.322  Sum_probs=32.5

Q ss_pred             cccccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          387 GVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       387 H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      ++++|++  ||.|.+|+|.|.+...|.+|+++|+++..-
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~   41 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPS   41 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCS
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCC
Confidence            4567776  999999999999999999999999987643

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.89  E-value=3.8e-06  Score=62.83  Aligned_cols=36  Identities=28%  Similarity=0.457  Sum_probs=32.0

Q ss_pred             cccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          387 GVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       387 H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      |.++|++  ||+|.+|+|.|.+...|.+|+++|+++..
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKS   40 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCC
Confidence            4567876  99999999999999999999999997754

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=97.88  E-value=4.3e-06  Score=58.83  Aligned_cols=31  Identities=23%  Similarity=0.632  Sum_probs=28.1

Q ss_pred             cCC--cccCCcCccccCCchhhhhhccccccCc
Q 003869          391 KDG--KFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       391 HtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      |++  ||.|.+|++.|.+.+.|.+|+++|+++.
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            554  9999999999999999999999998764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.88  E-value=5.5e-06  Score=72.73  Aligned_cols=57  Identities=9%  Similarity=0.222  Sum_probs=46.1

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcCccccCCchhhhhhccccc
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      .+.+++||.|.+|++.|.....|.+|++ .                    |++  ||+|..|    .+...|..|+++|.
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~-~--------------------Ht~ekp~~C~~~----~~~~~~~~~~~~~~   73 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLN-I--------------------HNEEFQKRAKRQ----ERRKQLLSKQKYAD   73 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHH-H--------------------HHHHHHHHCCCC----SCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHH-H--------------------hCCCCCcccchh----hhHHHHHhhhcccc
Confidence            3556799999999999999999999987 3                    444  8999654    56778888999998


Q ss_pred             cCcc
Q 003869          419 RNYV  422 (790)
Q Consensus       419 gE~~  422 (790)
                      +...
T Consensus        74 ~~~~   77 (88)
T 1x6f_A           74 GAFA   77 (88)
T ss_dssp             CSSS
T ss_pred             cccc
Confidence            7653

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.87  E-value=3.6e-06  Score=58.92  Aligned_cols=31  Identities=23%  Similarity=0.427  Sum_probs=28.0

Q ss_pred             cCC--cccCCcCccccCCchhhhhhccccccCc
Q 003869          391 KDG--KFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       391 HtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      |++  ||.|..|++.|.+.+.|.+|+++|+++.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            454  9999999999999999999999998764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.86  E-value=3e-06  Score=61.00  Aligned_cols=33  Identities=15%  Similarity=0.211  Sum_probs=29.2

Q ss_pred             ccccCC--cccCCcCccccCCchhhhhh-ccccccC
Q 003869          388 VIIKDG--KFECQFCHKVFHERRRYNGH-VGIHVRN  420 (790)
Q Consensus       388 ~RtHtG--PYkC~~CGKsFs~ks~L~rH-~RtHtgE  420 (790)
                      +++|++  ||+|..|+++|.+++.|.+| +++|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            356776  99999999999999999999 9999864

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.86  E-value=8e-06  Score=69.27  Aligned_cols=57  Identities=16%  Similarity=0.179  Sum_probs=47.8

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcCccccCCchhhhhhcccccc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      +-+++||.|.+|++.|. ...|..|+.                      |.+  ||.|+.|++.|.+ ..|..|+++|++
T Consensus        12 ~c~~r~~~C~~C~~~~~-~~~L~~H~~----------------------~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~   67 (75)
T 2d9k_A           12 ECPLRLAVCQHCDLELS-ILKLKEHED----------------------YCGARTELCGNCGRNVLV-KDLKTHPEVCGR   67 (75)
T ss_dssp             CCCCCCEECSSSCCEEC-HHHHHHHHH----------------------HHHHCEEECSSSCCEEET-TGGGTHHHHBTT
T ss_pred             cCCCcccCCcccChHhh-HHHHHHHHh----------------------HcCCCceEcccCCCcCcH-HHHHHHHHHccC
Confidence            45689999999999994 888888853                      343  9999999999884 899999999987


Q ss_pred             Ccc
Q 003869          420 NYV  422 (790)
Q Consensus       420 E~~  422 (790)
                      +..
T Consensus        68 ~~~   70 (75)
T 2d9k_A           68 EGS   70 (75)
T ss_dssp             BSS
T ss_pred             CcC
Confidence            644

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.84  E-value=4.9e-06  Score=59.00  Aligned_cols=31  Identities=16%  Similarity=0.491  Sum_probs=28.0

Q ss_pred             ccCC--cccCCcCccccCCchhhhhhccccccC
Q 003869          390 IKDG--KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       390 tHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      .|++  ||+|.+|++.|.+.+.|.+|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            4554  999999999999999999999999875

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.83  E-value=3.8e-06  Score=59.98  Aligned_cols=32  Identities=16%  Similarity=0.356  Sum_probs=28.7

Q ss_pred             cccCC--cccCCcCccccCCc-hhhhhhccccccC
Q 003869          389 IIKDG--KFECQFCHKVFHER-RRYNGHVGIHVRN  420 (790)
Q Consensus       389 RtHtG--PYkC~~CGKsFs~k-s~L~rH~RtHtgE  420 (790)
                      ++|++  ||+|..|++.|.+. +.|.+|+++|+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            35665  99999999999999 9999999999875

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.83  E-value=7e-06  Score=61.51  Aligned_cols=36  Identities=25%  Similarity=0.437  Sum_probs=32.0

Q ss_pred             cccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          387 GVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       387 H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ++++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKP   40 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCC
Confidence            4567886  99999999999999999999999997754

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.81  E-value=6.5e-06  Score=54.25  Aligned_cols=27  Identities=22%  Similarity=0.655  Sum_probs=24.2

Q ss_pred             cccCCcCccccCCchhhhhhccccccC
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      ||+|..|+|.|.+...|.+|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            799999999999999999999999864

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.80  E-value=7.5e-06  Score=59.86  Aligned_cols=34  Identities=29%  Similarity=0.438  Sum_probs=30.0

Q ss_pred             cccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          389 IIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       389 RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ++|++  ||.|.+|++.|.+...|..|+++|+++..
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   38 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGP   38 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCC
Confidence            35666  99999999999999999999999997653

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.79  E-value=1.6e-05  Score=59.10  Aligned_cols=31  Identities=23%  Similarity=0.477  Sum_probs=26.7

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      .+.+++||.|..|++.|...++|.+|++ .|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   34 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTL-QTH   34 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHH-HHT
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHH-hhC
Confidence            3556799999999999999999999988 444

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.79  E-value=1.5e-05  Score=59.82  Aligned_cols=32  Identities=22%  Similarity=0.423  Sum_probs=27.4

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||+|.+|++.|.....|.+|++ .|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   36 (46)
T 2em4_A            5 SSGTGQRPYECIECGKAFKTKSSLICHRR-SHT   36 (46)
T ss_dssp             CCCCCSSSEECSSSCCEESSHHHHHHHHH-HHS
T ss_pred             cccCCCcCcCCCCCCCccCCHHHHHHHHH-hcC
Confidence            34567899999999999999999999988 444

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.78  E-value=1.7e-05  Score=59.40  Aligned_cols=29  Identities=14%  Similarity=0.406  Sum_probs=25.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||.|..|++.|...+.|.+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2enf_A            5 SSGTGEKPYKCNECGKVFTQNSHLVRHRG   33 (46)
T ss_dssp             CCCCCCCSCBCSSSCCBCSSHHHHHHHHT
T ss_pred             cCCCCCcCeECCCCCcccCCHHHHHHHHH
Confidence            34567899999999999999999999977

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.78  E-value=6.2e-06  Score=58.47  Aligned_cols=31  Identities=16%  Similarity=0.465  Sum_probs=28.1

Q ss_pred             ccCC--cccCCcCccccCCchhhhhhccccccC
Q 003869          390 IKDG--KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       390 tHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      .|++  ||+|.+|++.|.+...|.+|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            4565  999999999999999999999999875

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=97.78  E-value=1.5e-05  Score=59.77  Aligned_cols=32  Identities=22%  Similarity=0.418  Sum_probs=27.3

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~   36 (46)
T 2emj_A            5 SSGTGEKPFECAECGKSFSISSQLATHQR-IHT   36 (46)
T ss_dssp             CCCCCCCSEECSSSSCEESSHHHHHHHHH-HHT
T ss_pred             CCCCCCCCEECCCCCcccCCHHHHHHHHH-HhC
Confidence            34567899999999999999999999988 444

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.77  E-value=1.8e-05  Score=59.14  Aligned_cols=29  Identities=24%  Similarity=0.525  Sum_probs=25.9

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||.|..|++.|.....|.+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ytf_A            5 SSGTGEKPFECSECQKAFNTKSNLIVHQR   33 (46)
T ss_dssp             CSSCCCCSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCCCCCcCCCCCCcccCCHHHHHHHHH
Confidence            34567899999999999999999999987

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.77  E-value=1.7e-05  Score=59.42  Aligned_cols=32  Identities=25%  Similarity=0.441  Sum_probs=27.4

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~   36 (46)
T 2em3_A            5 SSGTGEKPYECKVCSKAFTQKAHLAQHQK-THT   36 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHH-HHC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHH-HhC
Confidence            34567899999999999999999999988 444

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.76  E-value=1.9e-05  Score=59.19  Aligned_cols=32  Identities=25%  Similarity=0.571  Sum_probs=27.4

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~   36 (46)
T 2en9_A            5 SSGAGKKLFKCNECKKTFTQSSSLTVHQR-IHT   36 (46)
T ss_dssp             SSCCSSCCCBCTTTCCBCSSHHHHHHHHH-HHT
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHH-HcC
Confidence            34567899999999999999999999988 444

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.76  E-value=1.9e-05  Score=59.12  Aligned_cols=29  Identities=21%  Similarity=0.408  Sum_probs=25.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||.|.+|++.|.....|.+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2emg_A            5 SSGTGENPFICSECGKVFTHKTNLIIHQK   33 (46)
T ss_dssp             CCCCSCCSCBCTTTCCBCSSHHHHHHHHT
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHH
Confidence            34567899999999999999999999987

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.76  E-value=2.2e-05  Score=58.62  Aligned_cols=29  Identities=21%  Similarity=0.363  Sum_probs=25.8

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||.|..|++.|.....|.+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2ep1_A            5 SSGTGEKPYECSDCGKSFIKKSQLHVHQR   33 (46)
T ss_dssp             CCCSSCCSSCCSSSCCCCSSHHHHHHHHG
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHH
Confidence            34567899999999999999999999987

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.76  E-value=1.8e-05  Score=59.17  Aligned_cols=29  Identities=14%  Similarity=0.371  Sum_probs=25.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||.|.+|++.|.....|.+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2yti_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRG   33 (46)
T ss_dssp             CCCSCCCTTCCSSSCCCCSSHHHHHHHHT
T ss_pred             cCCCCCcCeECCCCCcccCChhHHHHHhH
Confidence            34566899999999999999999999977

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.76  E-value=1.6e-05  Score=59.76  Aligned_cols=29  Identities=17%  Similarity=0.370  Sum_probs=25.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||+|.+|++.|.....|.+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHS   33 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTT
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHH
Confidence            44567899999999999999999999976

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.75  E-value=1.7e-05  Score=59.47  Aligned_cols=29  Identities=24%  Similarity=0.476  Sum_probs=25.8

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||+|.+|++.|...+.|.+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2ytp_A            5 SSGTGERHYECSECGKAFARKSTLIMHQR   33 (46)
T ss_dssp             CSSCCCCCEECSSSCCEESSHHHHHHHHT
T ss_pred             cCcCCCCCeECCcCCcccCCHHHHHHHHH
Confidence            34567899999999999999999999977

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.75  E-value=2.1e-05  Score=58.89  Aligned_cols=32  Identities=25%  Similarity=0.446  Sum_probs=27.2

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.++++|.|.+|++.|.....|.+|++ .|.
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~   36 (46)
T 2emi_A            5 SSGTGERHYECSECGKAFIQKSTLSMHQR-IHR   36 (46)
T ss_dssp             CSCSSCCCEECSSSCCEESSHHHHHHHHG-GGC
T ss_pred             cccCCCCCCCCCCCCcccCCHHHHHHHHh-HhC
Confidence            34567899999999999999999999987 443

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.74  E-value=2.1e-05  Score=58.93  Aligned_cols=32  Identities=25%  Similarity=0.427  Sum_probs=27.4

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||+|.+|++.|.....|.+|++ +|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   36 (46)
T 2eoh_A            5 SSGSGKKPYECKECRKTFIQIGHLNQHKR-VHT   36 (46)
T ss_dssp             CSCCCSCSCCCSSSCCCCSSHHHHHHHHH-HCS
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHH-HhC
Confidence            44667899999999999999999999988 443

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.74  E-value=2e-05  Score=58.94  Aligned_cols=29  Identities=14%  Similarity=0.402  Sum_probs=25.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||.|..|++.|.....|.+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eq2_A            5 SSGTGGKPYQCNECGKAFSQTSKLARHQR   33 (46)
T ss_dssp             CSSSSSCSSSCCSSCCCCSSHHHHHHHGG
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHH
Confidence            34567899999999999999999999977

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.74  E-value=7e-06  Score=57.94  Aligned_cols=31  Identities=16%  Similarity=0.312  Sum_probs=28.0

Q ss_pred             ccCC--cccCCcCccccCCchhhhhhccccccC
Q 003869          390 IKDG--KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       390 tHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      +|++  ||.|.+|++.|.....|.+|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            3555  999999999999999999999999875

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.73  E-value=1.9e-05  Score=58.95  Aligned_cols=32  Identities=16%  Similarity=0.406  Sum_probs=27.3

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   36 (46)
T 2eow_A            5 SSGTGEKPYKCNECGKAFRARSSLAIHQA-THS   36 (46)
T ss_dssp             CCSCCCCCEECTTSCCEESSHHHHHHHHH-HHC
T ss_pred             CCCCCCCCeeccccCChhcCHHHHHHHHH-HcC
Confidence            34567899999999999999999999988 444

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.73  E-value=1.9e-05  Score=58.94  Aligned_cols=29  Identities=17%  Similarity=0.332  Sum_probs=25.6

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||.|..|++.|...+.|.+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2yts_A            5 SSGTGEKPYICNECGKSFIQKSHLNRHRR   33 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHGG
T ss_pred             CCCCCCcCEECCCCChhhCChHHHHHHHH
Confidence            34566899999999999999999999976

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.73  E-value=2.3e-05  Score=58.71  Aligned_cols=29  Identities=14%  Similarity=0.334  Sum_probs=25.6

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||.|.+|++.|.....|.+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2em6_A            5 SSGMGEKCYKCDVCGKEFSQSSHLQTHQR   33 (46)
T ss_dssp             SCCCCCCCCBCSSSCCBCSSHHHHHHHHT
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHH
Confidence            34566899999999999999999999977

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.73  E-value=2.3e-05  Score=58.88  Aligned_cols=31  Identities=19%  Similarity=0.369  Sum_probs=26.8

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      .+.+++||+|.+|++.|....+|.+|++ .|.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~   36 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRR-IHT   36 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHH-HHS
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHH-HhC
Confidence            4556899999999999999999999988 444

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.72  E-value=8.7e-06  Score=57.42  Aligned_cols=30  Identities=20%  Similarity=0.483  Sum_probs=27.5

Q ss_pred             cCC--cccCCcCccccCCchhhhhhccccccC
Q 003869          391 KDG--KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       391 HtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      |++  ||.|.+|+|.|.+...|.+|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            454  999999999999999999999999875

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.72  E-value=2.2e-05  Score=58.73  Aligned_cols=29  Identities=14%  Similarity=0.422  Sum_probs=25.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||.|.+|++.|.....|.+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eq1_A            5 SSGTGEKPYKCNECGKAFRAHSNLTTHQV   33 (46)
T ss_dssp             CCCCCSCCCCCTTTTCCCSSHHHHHHHHT
T ss_pred             cccCCCCCeECCcCChhhCCHHHHHHHHH
Confidence            34556899999999999999999999977

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.72  E-value=8e-06  Score=62.72  Aligned_cols=34  Identities=21%  Similarity=0.413  Sum_probs=27.3

Q ss_pred             ccCC--cccCCcCccccCCchhhhhhcc-ccccCccc
Q 003869          390 IKDG--KFECQFCHKVFHERRRYNGHVG-IHVRNYVR  423 (790)
Q Consensus       390 tHtG--PYkC~~CGKsFs~ks~L~rH~R-tHtgE~~~  423 (790)
                      +|++  ||.|.+|+|+|.+...|.+|++ +|+++...
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            3565  9999999999999999999999 99987654

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=97.72  E-value=2.3e-05  Score=57.41  Aligned_cols=31  Identities=26%  Similarity=0.568  Sum_probs=26.6

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      .+.+++||+|.+|++.|...+.|.+|++ .|.
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   34 (42)
T 2el5_A            4 GSSGENPYECSECGKAFNRKDQLISHQR-THA   34 (42)
T ss_dssp             SSSSCCSEECSSSCCEESSHHHHHHHHG-GGC
T ss_pred             CCCCCCCccCCCcChhhCCHHHHHHHHH-hcC
Confidence            3556899999999999999999999987 444

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.72  E-value=2.5e-05  Score=57.00  Aligned_cols=31  Identities=23%  Similarity=0.554  Sum_probs=26.9

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      .+.+++||.|.+|++.|...+.|.+|++ .|.
T Consensus         4 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   34 (42)
T 2yte_A            4 GSSGEKPYSCAECKETFSDNNRLVQHQK-MHT   34 (42)
T ss_dssp             SSCSCCSCBCTTTCCBCSSHHHHHHHHH-HTS
T ss_pred             CcCCCCCeECCCCCCccCCHHHHHHHHH-HhC
Confidence            3567899999999999999999999988 454

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.71  E-value=2.2e-05  Score=58.61  Aligned_cols=29  Identities=21%  Similarity=0.408  Sum_probs=25.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||.|..|++.|.....|.+|++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2yrj_A            5 SSGTGEKPYRCGECGKAFAQKANLTQHQR   33 (46)
T ss_dssp             CCCCCCCCEECSSSCCEESSHHHHHHHHT
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            34556899999999999999999999977

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.71  E-value=1.8e-05  Score=59.09  Aligned_cols=32  Identities=16%  Similarity=0.378  Sum_probs=27.3

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|..|++.|.....|.+|++ .|.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~   36 (46)
T 2eor_A            5 SSGTGEKPYNCEECGKAFIHDSQLQEHQR-IHT   36 (46)
T ss_dssp             SSSSCCCSEECTTTCCEESSHHHHHHHHH-HHH
T ss_pred             cCcCCCcCccCCCCCCCcCCHHHHHHHHH-hcC
Confidence            34567899999999999999999999988 444

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.71  E-value=1e-05  Score=60.78  Aligned_cols=36  Identities=25%  Similarity=0.392  Sum_probs=31.9

Q ss_pred             cccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          387 GVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       387 H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .+++|++  ||.|.+|+|.|.+...|.+|+++|+++..
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKP   40 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            4567886  99999999999999999999999997654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.71  E-value=8.5e-06  Score=62.08  Aligned_cols=38  Identities=26%  Similarity=0.474  Sum_probs=32.2

Q ss_pred             CCCccccccCC--cccCC--cCccccCCchhhhhhccccccC
Q 003869          383 SVGDGVIIKDG--KFECQ--FCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       383 sLk~H~RtHtG--PYkC~--~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      .+..|+..|++  ||.|.  .|+|+|.+.+.|.+|+++|+++
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            34455566887  99996  7999999999999999999976

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.71  E-value=2.5e-05  Score=58.59  Aligned_cols=28  Identities=18%  Similarity=0.400  Sum_probs=25.2

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHH
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      .+.+++||.|..|++.|...+.|.+|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2yth_A            6 SGSGEKPFQCEECGKRFTQNSHLHSHQR   33 (46)
T ss_dssp             CCCCSSSBCCSSSCCCBSSHHHHHHHGG
T ss_pred             CCCCCcCCCCCCCCcccCCHHHHHHHHH
Confidence            4556899999999999999999999977

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.70  E-value=2.1e-05  Score=59.15  Aligned_cols=39  Identities=18%  Similarity=0.219  Sum_probs=32.7

Q ss_pred             cccCCcccccC--CCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcC
Q 003869          341 EVQVRDLFECH--KCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFC  400 (790)
Q Consensus       341 ~~q~EKPyeC~--~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~C  400 (790)
                      .+.+++||+|.  .|++.|.....|.+|++ .                    |++  ||+|.+|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~--------------------H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRR-S--------------------HSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHT-T--------------------SCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHH-H--------------------hCCCCCCCCCCC
Confidence            35567999998  89999999999999977 3                    443  9999887

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.70  E-value=1.4e-05  Score=59.34  Aligned_cols=34  Identities=21%  Similarity=0.248  Sum_probs=30.3

Q ss_pred             cccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          389 IIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       389 RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ++|++  ||.|..|++.|.+...|.+|+++|+++..
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   38 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKS   38 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCC
Confidence            45676  99999999999999999999999998754

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.70  E-value=6.5e-06  Score=57.47  Aligned_cols=28  Identities=21%  Similarity=0.394  Sum_probs=26.5

Q ss_pred             cccCCcCccccCCchhhhhhccccccCc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      ||+|.+|+|+|.+.+.|.+|+++|+++.
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~k   29 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVV   29 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCC
Confidence            8999999999999999999999999765

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.70  E-value=2.4e-05  Score=58.62  Aligned_cols=29  Identities=21%  Similarity=0.422  Sum_probs=25.6

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||.|.+|++.|.....|.+|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (46)
T 2enh_A            5 SSGTGEKPYECDVCRKAFSHHASLTQHQR   33 (46)
T ss_dssp             CCCCCSSSCBCTTTCCBCSSSHHHHHHGG
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHH
Confidence            34567899999999999999999999977

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.69  E-value=2e-05  Score=58.79  Aligned_cols=29  Identities=24%  Similarity=0.485  Sum_probs=25.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||+|.+|++.|.....|.+|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~   33 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQR   33 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHH
Confidence            34567899999999999999999999977

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.69  E-value=2.2e-05  Score=58.09  Aligned_cols=29  Identities=24%  Similarity=0.512  Sum_probs=25.9

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHH
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (44)
T 2eoj_A            5 SSGTGENPYECCECGKVFSRKDQLVSHQK   33 (44)
T ss_dssp             CSSSSCCSCEETTTTEECSSHHHHHHHHT
T ss_pred             cccCCCcCeeCCCCCCccCCHHHHHHHHH
Confidence            34567899999999999999999999987

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.69  E-value=8.8e-06  Score=60.99  Aligned_cols=27  Identities=15%  Similarity=0.438  Sum_probs=25.7

Q ss_pred             cccCCc--CccccCCchhhhhhccccccC
Q 003869          394 KFECQF--CHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       394 PYkC~~--CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      ||+|.+  |+|+|.+++.|.+|+++|+++
T Consensus         9 p~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            9 LLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            999986  999999999999999999975

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.68  E-value=2.7e-05  Score=57.39  Aligned_cols=32  Identities=19%  Similarity=0.356  Sum_probs=27.0

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   36 (44)
T 2en7_A            5 SSGTGMKPYVCNECGKAFRSKSYLIIHTR-THT   36 (44)
T ss_dssp             CCSSSSSSSCCTTTCCCCSSHHHHHHHHT-TTC
T ss_pred             cCCCCCcCeECCCCCCccCCHHHHHHHhh-hcC
Confidence            34567899999999999999999999987 443

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.67  E-value=2.9e-05  Score=57.30  Aligned_cols=32  Identities=22%  Similarity=0.510  Sum_probs=27.3

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|..|++.|....+|.+|++ .|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   36 (44)
T 2eof_A            5 SSGTGEKPYECNECQKAFNTKSNLMVHQR-THT   36 (44)
T ss_dssp             SCCSCCCSEECTTTCCEESCHHHHHHHHH-HTT
T ss_pred             cCCCCCCCeECCCCCcccCCHhHHHHHHH-HhC
Confidence            34567899999999999999999999988 444

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.67  E-value=1.3e-05  Score=53.45  Aligned_cols=27  Identities=30%  Similarity=0.546  Sum_probs=25.7

Q ss_pred             cccCCcCccccCCchhhhhhccccccC
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            899999999999999999999999875

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.66  E-value=2.5e-05  Score=58.54  Aligned_cols=32  Identities=22%  Similarity=0.354  Sum_probs=27.3

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   36 (46)
T 2eoz_A            5 SSGTGEKPYSCNVCGKAFVLSAHLNQHLR-VHT   36 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESSHHHHHHHHH-HHS
T ss_pred             ccCCCCCCeECcccChhhCCHHHHHHHHH-HhC
Confidence            34567899999999999999999999988 444

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=97.65  E-value=3.1e-05  Score=56.52  Aligned_cols=32  Identities=13%  Similarity=0.281  Sum_probs=27.4

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|.+|++.|...+.|.+|++ .|.
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~   35 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQR-SCS   35 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHH-HTT
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhh-hcC
Confidence            34566899999999999999999999988 554

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=97.65  E-value=8.4e-06  Score=71.24  Aligned_cols=55  Identities=11%  Similarity=0.241  Sum_probs=47.0

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC--cccC
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG--KFEC  397 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG--PYkC  397 (790)
                      +..+++|.|.+|++.|.....|.+|++ .|.+.        ++.|.....|..|+++|++  ||.+
T Consensus        40 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           40 HTDERPYTCDICHKAFRRQDHLRDHRY-IHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             HCCSCCCBCSSSCCBCSCHHHHHHHGG-GSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             cCCCCCcCCCCccchhCCHHHHHHHHH-HhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            345689999999999999999999988 77654        5789899999999999997  7764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=97.65  E-value=1.6e-05  Score=57.50  Aligned_cols=29  Identities=28%  Similarity=0.828  Sum_probs=27.2

Q ss_pred             cccCCcCccccCCchhhhhhccccccCcc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ||.|.+|++.|.+.+.|..|+++|+++..
T Consensus         6 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   34 (39)
T 1njq_A            6 SYTCSFCKREFRSAQALGGHMNVHRRDRA   34 (39)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             ceECCCCCcccCCHHHHHHHHHHcCCCcc
Confidence            99999999999999999999999997754

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.64  E-value=3.6e-05  Score=57.12  Aligned_cols=32  Identities=19%  Similarity=0.466  Sum_probs=27.2

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~   36 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQA-LHA   36 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHH-HHT
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHH-HHC
Confidence            34556799999999999999999999988 454

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.64  E-value=2.4e-05  Score=57.06  Aligned_cols=31  Identities=23%  Similarity=0.536  Sum_probs=26.3

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      .+.+++||+|.+|++.|.....|.+|++ .|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   34 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHER-IHT   34 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGG-GCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHH-HhC
Confidence            3456799999999999999999999977 444

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.64  E-value=3e-05  Score=58.09  Aligned_cols=32  Identities=19%  Similarity=0.350  Sum_probs=27.3

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||+|.+|++.|.....|.+|++ .|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   36 (46)
T 2yto_A            5 SSGTGEKPYKCSDCGKAFTRKSGLHIHQQ-SHT   36 (46)
T ss_dssp             CCCCSCCCEECSSSCCEESSHHHHHHHHH-HHT
T ss_pred             cccCCCCCEECcccCCccCCHhHHHHHHH-HcC
Confidence            34567899999999999999999999988 444

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.64  E-value=3e-05  Score=56.86  Aligned_cols=31  Identities=23%  Similarity=0.421  Sum_probs=26.5

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      .+.+++||+|.+|++.|...+.|.+|++ .|.
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   35 (42)
T 2eos_A            5 SSGGEKPYPCEICGTRFRHLQTLKSHLR-IHT   35 (42)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHTT-TTS
T ss_pred             ccCCCCCEECCCCCCccCCHHHHHHHHH-hcC
Confidence            4567899999999999999999999977 443

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.64  E-value=1.3e-05  Score=56.45  Aligned_cols=29  Identities=28%  Similarity=0.449  Sum_probs=27.0

Q ss_pred             cccCCcCccccCCchhhhhhccccccCcc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ||.|.+|+|.|.+.+.|..|+++|+++..
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~   30 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGE   30 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            89999999999999999999999998753

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.63  E-value=2.5e-05  Score=58.58  Aligned_cols=32  Identities=22%  Similarity=0.492  Sum_probs=27.5

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||+|.+|++.|....+|.+|++ .|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   36 (46)
T 2emz_A            5 SSGSGERPFKCNECGKGFGRRSHLAGHLR-LHS   36 (46)
T ss_dssp             SCSSCCCSCCCSSSCCCCSSHHHHHHHHH-HHH
T ss_pred             cCCCCCCCeECCCCCcccCCHHHHHHHHH-HhC
Confidence            34567899999999999999999999988 454

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.63  E-value=3.1e-05  Score=57.33  Aligned_cols=32  Identities=31%  Similarity=0.637  Sum_probs=26.9

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|..|++.|...+.|.+|++ .|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   36 (44)
T 2emb_A            5 SSGHTRKRYECSKCQATFNLRKHLIQHQK-THA   36 (44)
T ss_dssp             SCCCCCSSEECTTTCCEESCHHHHHHHGG-GGC
T ss_pred             cccCCCCCeECCCCCCccCCHHHHHHHHH-HcC
Confidence            34567899999999999999999999977 443

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.63  E-value=3.6e-05  Score=57.03  Aligned_cols=32  Identities=25%  Similarity=0.530  Sum_probs=27.4

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   36 (44)
T 2yu5_A            5 SSGAGENPFKCSKCDRVFTQRNYLVQHER-THA   36 (44)
T ss_dssp             CCCSCCCSEECSSSSCEESSSHHHHHHHH-HCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHhH-hcC
Confidence            34567899999999999999999999988 444

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.61  E-value=3.9e-05  Score=57.50  Aligned_cols=32  Identities=34%  Similarity=0.535  Sum_probs=27.6

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|..|++.|.....|.+|++ .|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   36 (46)
T 2eoy_A            5 SSGQKEKCFKCNKCEKTFSCSKYLTQHER-IHT   36 (46)
T ss_dssp             CCCCCSCCEECSSSCCEESSSHHHHHHHT-TCC
T ss_pred             cccCCCCCEECcCCCCcCCCHHHHHHHHH-HcC
Confidence            34567899999999999999999999987 554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.61  E-value=1.4e-05  Score=56.63  Aligned_cols=27  Identities=33%  Similarity=0.844  Sum_probs=26.0

Q ss_pred             cccCCcCccccCCchhhhhhccccccC
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      ||.|..|++.|.+...|..|+++|+++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            9 IFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            999999999999999999999999875

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.60  E-value=1.5e-05  Score=53.06  Aligned_cols=27  Identities=22%  Similarity=0.626  Sum_probs=25.7

Q ss_pred             cccCCcCccccCCchhhhhhccccccC
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      ||.|..|++.|.+...|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            799999999999999999999999875

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.60  E-value=2.5e-05  Score=57.15  Aligned_cols=32  Identities=19%  Similarity=0.439  Sum_probs=27.5

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|..|++.|.....|.+|++ .|.
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~   35 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVL-IHT   35 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTH-HHH
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHH-HcC
Confidence            34567899999999999999999999987 554

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.59  E-value=3.7e-05  Score=57.38  Aligned_cols=28  Identities=18%  Similarity=0.444  Sum_probs=25.3

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHH
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      .+.+++||.|..|++.|...+.|.+|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~   33 (46)
T 2eq3_A            6 SGTGEKPYECNQCGKAFSVRSSLTTHQA   33 (46)
T ss_dssp             SSCCCCSSEETTTTEECSSHHHHHHHHT
T ss_pred             CCCCCCCeECCCCChhhCCHHHHHHHHH
Confidence            4556899999999999999999999977

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.58  E-value=2.2e-05  Score=65.16  Aligned_cols=38  Identities=29%  Similarity=0.536  Sum_probs=34.4

Q ss_pred             CCCccccccCC--cccCCcCccccCCchhhhhhcc-ccccC
Q 003869          383 SVGDGVIIKDG--KFECQFCHKVFHERRRYNGHVG-IHVRN  420 (790)
Q Consensus       383 sLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~R-tHtgE  420 (790)
                      +|.+|+++|++  ||.|.+|++.|.....|.+|++ .|.++
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~   42 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN   42 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCC
Confidence            67899999997  9999999999999999999997 67653

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.73  E-value=9.9e-06  Score=54.40  Aligned_cols=27  Identities=26%  Similarity=0.529  Sum_probs=25.7

Q ss_pred             cccCCcCccccCCchhhhhhccccccC
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      ||.|..|++.|.+.+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            799999999999999999999999875

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.57  E-value=2.9e-05  Score=58.30  Aligned_cols=37  Identities=19%  Similarity=0.208  Sum_probs=32.5

Q ss_pred             ccccccCC--cccCC--cCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQ--FCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~--~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|.++|++  ||+|.  .|+|.|.+...|.+|+++|+++..
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   42 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKP   42 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCS
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            36677886  99998  899999999999999999997654

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.57  E-value=3e-05  Score=56.65  Aligned_cols=28  Identities=18%  Similarity=0.527  Sum_probs=24.8

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHH
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      .+.+++||.|.+|++.|...+.|.+|++
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~   32 (42)
T 2ytb_A            5 SSGGEKPYRCDQCGKAFSQKGSLIVHIR   32 (42)
T ss_dssp             CCCSCCSBCCTTTTCCBSSHHHHHTTGG
T ss_pred             ccCCCCCeeCCCccchhCCHHHHHHHHH
Confidence            4567899999999999999999988876

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=97.56  E-value=9e-06  Score=69.62  Aligned_cols=48  Identities=15%  Similarity=0.328  Sum_probs=44.0

Q ss_pred             CccccCCCCCCccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          375 TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       375 hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ++.|.....|..|++.|.+  ||.|..|++.|.....|.+|+++|+++..
T Consensus        15 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   64 (96)
T 2dmd_A           15 GKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP   64 (96)
T ss_dssp             TBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCC
T ss_pred             CCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            5788888999999999997  99999999999999999999999987654

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.56  E-value=1.8e-05  Score=52.45  Aligned_cols=27  Identities=26%  Similarity=0.701  Sum_probs=25.7

Q ss_pred             cccCCcCccccCCchhhhhhccccccC
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      ||.|..|++.|.+...|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            899999999999999999999999875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.55  E-value=2e-05  Score=52.58  Aligned_cols=28  Identities=18%  Similarity=0.582  Sum_probs=26.1

Q ss_pred             CcccCCcCccccCCchhhhhhccccccC
Q 003869          393 GKFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            3899999999999999999999999875

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.53  E-value=3.5e-05  Score=57.61  Aligned_cols=32  Identities=25%  Similarity=0.507  Sum_probs=27.4

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~   36 (46)
T 2en3_A            5 SSGTGEKPFQCKECGMNFSWSCSLFKHLR-SHE   36 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSSHHHHHHHH-HHH
T ss_pred             cccCCCCCeeCcccChhhCCHHHHHHHHH-HhC
Confidence            34567899999999999999999999987 454

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.53  E-value=2.3e-05  Score=52.07  Aligned_cols=27  Identities=22%  Similarity=0.583  Sum_probs=25.1

Q ss_pred             CcccCCcCccccCCchhhhhhcccccc
Q 003869          393 GKFECQFCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      +||.|..|+|.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            389999999999999999999999974

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.53  E-value=3e-05  Score=53.02  Aligned_cols=27  Identities=26%  Similarity=0.588  Sum_probs=25.6

Q ss_pred             cccCC--cCccccCCchhhhhhccccccC
Q 003869          394 KFECQ--FCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       394 PYkC~--~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      ||.|.  .|||+|.+.+.|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            89998  9999999999999999999875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=97.52  E-value=4.7e-06  Score=71.01  Aligned_cols=45  Identities=18%  Similarity=0.406  Sum_probs=42.0

Q ss_pred             CccccCCCCCCccccccCC--cccCCcCccccCCchhhhhhcccccc
Q 003869          375 TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       375 hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      ++.|.....|..|+++|++  ||.|..|++.|.....|.+|+++|++
T Consensus        10 ~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C           10 MRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC
Confidence            5789999999999999997  99999999999999999999999874

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=97.52  E-value=7.1e-05  Score=53.07  Aligned_cols=33  Identities=21%  Similarity=0.351  Sum_probs=28.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      ..+.+++||+|+.|++.|.....|.+|++ .|.+
T Consensus         4 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~   36 (37)
T 1p7a_A            4 RGSTGIKPFQCPDCDRSFSRSDHLALHRK-RHML   36 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHG-GGTC
T ss_pred             CcCCCCCCccCCCCCcccCcHHHHHHHHH-Hhcc
Confidence            44667899999999999999999999988 6764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=97.51  E-value=1.1e-05  Score=66.86  Aligned_cols=51  Identities=16%  Similarity=0.307  Sum_probs=43.7

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG  393 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG  393 (790)
                      +.++++|.|..|++.|.....|.+|++ .|.+.        ++.|.....|..|+++|+|
T Consensus        24 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           24 HSDTRPYPCQYCGKRFHQKSDMKKHTF-IHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             HHTCCCEECSSSCCEESSHHHHHHHHH-HHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             cCCCCCeeCCcCChhhCCHHHHHHHHH-HhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            345689999999999999999999998 67654        6889999999999999975

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=97.51  E-value=8.8e-06  Score=69.54  Aligned_cols=46  Identities=20%  Similarity=0.368  Sum_probs=43.0

Q ss_pred             CccccCCCCCCccccccCC--cccCCcCccccCCchhhhhhccccccC
Q 003869          375 TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       375 hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      ++.|.....|..|+++|++  ||.|.+|++.|.....|..|+++|+++
T Consensus        14 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   61 (95)
T 2yt9_A           14 GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS   61 (95)
T ss_dssp             CCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCC
T ss_pred             CCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCC
Confidence            5789999999999999997  999999999999999999999999875

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.50  E-value=1e-05  Score=71.33  Aligned_cols=48  Identities=21%  Similarity=0.391  Sum_probs=44.0

Q ss_pred             CccccCCCCCCccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          375 TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       375 hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ++.|.....|..|++.|.+  ||.|.+|++.|.....|.+|+++|+++..
T Consensus        16 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   65 (110)
T 2csh_A           16 GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP   65 (110)
T ss_dssp             SCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCC
T ss_pred             CCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5788888999999999997  99999999999999999999999987654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.50  E-value=1.8e-05  Score=52.57  Aligned_cols=28  Identities=29%  Similarity=0.611  Sum_probs=26.1

Q ss_pred             CcccCCcCccccCCchhhhhhccccccC
Q 003869          393 GKFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            3899999999999999999999999875

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.50  E-value=3.4e-05  Score=57.16  Aligned_cols=32  Identities=16%  Similarity=0.346  Sum_probs=27.1

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||.|.+|++.|.....|.+|++ .|.
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~-~H~   36 (44)
T 2eox_A            5 SSGTDSKSYNCNECGKAFTRIFHLTRHQK-IHT   36 (44)
T ss_dssp             CCCCCCCCEEETTTTEEESSSHHHHTTHH-HHC
T ss_pred             cCCCCCCCeECcccCcccCCHHHHHHHHH-HhC
Confidence            34567899999999999999999999987 444

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.50  E-value=2.5e-05  Score=58.32  Aligned_cols=34  Identities=24%  Similarity=0.437  Sum_probs=30.1

Q ss_pred             ccCC--cccCCcCccccCCchhhhhhccccccCccc
Q 003869          390 IKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       390 tHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      .|++  ||+|.+|+|.|.++..|.+|+++|+++...
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~   39 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK   39 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCC
Confidence            4665  999999999999999999999999977643

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.49  E-value=3e-05  Score=51.68  Aligned_cols=28  Identities=14%  Similarity=0.422  Sum_probs=26.0

Q ss_pred             cccCCcCccccCCchhhhhhccccccCc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      ||.|.+|++.|...+.|..|+++|+++.
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            7999999999999999999999998753

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.49  E-value=3.4e-05  Score=64.47  Aligned_cols=38  Identities=21%  Similarity=0.422  Sum_probs=34.7

Q ss_pred             CCCccccccCC--cccCCcCccccCCchhhhhhccccccC
Q 003869          383 SVGDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       383 sLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      +|.+|+++|++  ||.|.+|++.|.....|.+|+++|+..
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~   41 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   41 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCC
Confidence            68899999997  999999999999999999999987654

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.49  E-value=7.4e-05  Score=55.52  Aligned_cols=32  Identities=22%  Similarity=0.347  Sum_probs=27.7

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.+++||+|.+|++.|...+.|.+|++ .|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~-~H~   36 (44)
T 2epv_A            5 SSGSGEKPYECNECGKAFIWKSLLIVHER-THA   36 (44)
T ss_dssp             CCCCCCCSEECSSSCCEESSHHHHHHHHG-GGS
T ss_pred             cccCCCcCeECCCCCcccCchHHHHHHHh-Hhc
Confidence            44567899999999999999999999988 554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.62  E-value=1.6e-05  Score=53.43  Aligned_cols=27  Identities=26%  Similarity=0.623  Sum_probs=25.7

Q ss_pred             cccCCcCccccCCchhhhhhccccccC
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      ||.|..|++.|.+...|..|+++|+++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            899999999999999999999999865

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.47  E-value=4.6e-05  Score=51.18  Aligned_cols=27  Identities=30%  Similarity=0.659  Sum_probs=25.5

Q ss_pred             cccCCcCccccCCchhhhhh-ccccccC
Q 003869          394 KFECQFCHKVFHERRRYNGH-VGIHVRN  420 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH-~RtHtgE  420 (790)
                      ||.|..|++.|.+.+.|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            79999999999999999999 8999875

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.47  E-value=2.2e-05  Score=52.34  Aligned_cols=26  Identities=15%  Similarity=0.392  Sum_probs=24.4

Q ss_pred             CcccCCcCccccCCchhhhhhccccc
Q 003869          393 GKFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      +||+|..|++.|.+.+.|.+|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            38999999999999999999999985

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=97.45  E-value=1.7e-05  Score=66.88  Aligned_cols=51  Identities=18%  Similarity=0.290  Sum_probs=44.6

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCccccccCC
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVIIKDG  393 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~RtHtG  393 (790)
                      +.++++|.|..|++.|.....|..|++ .|.+.        ++.|.....|..|+++|++
T Consensus        29 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~   87 (90)
T 1a1h_A           29 HTGQKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHTKIHLR   87 (90)
T ss_dssp             HHCCCCEECTTTCCEESCHHHHHHHHH-HHHCCCCEECTTTCCEESSHHHHHHHHGGGGC
T ss_pred             hCCCCCccCCCCCcccCCHHHHHHHHH-HcCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            345689999999999999999999998 77654        6789999999999999986

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.45  E-value=2.8e-05  Score=51.50  Aligned_cols=26  Identities=19%  Similarity=0.433  Sum_probs=24.4

Q ss_pred             CcccCCcCccccCCchhhhhhccccc
Q 003869          393 GKFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      +||.|..||+.|.+.+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            38999999999999999999999985

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=97.45  E-value=6.1e-06  Score=68.62  Aligned_cols=45  Identities=18%  Similarity=0.380  Sum_probs=42.4

Q ss_pred             CccccCCCCCCccccccCC--cccCCc--CccccCCchhhhhhcccccc
Q 003869          375 TRRYRLGSSVGDGVIIKDG--KFECQF--CHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       375 hK~F~~sssLk~H~RtHtG--PYkC~~--CGKsFs~ks~L~rH~RtHtg  419 (790)
                      ++.|.....|..|+++|++  ||+|+.  |+++|.....|.+|+++|++
T Consensus        10 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A           10 GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             CCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             CcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            6788899999999999997  999998  99999999999999999987

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=97.44  E-value=7.6e-05  Score=53.90  Aligned_cols=30  Identities=20%  Similarity=0.410  Sum_probs=26.0

Q ss_pred             cCCcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          343 QVRDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       343 q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      .+++||.|..|++.|...+.|.+|++ .|.+
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~   31 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMN-VHRR   31 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHH-TTCC
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHH-HcCC
Confidence            35689999999999999999999988 5553

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.44  E-value=5.3e-05  Score=52.03  Aligned_cols=28  Identities=21%  Similarity=0.423  Sum_probs=26.0

Q ss_pred             CcccCC--cCccccCCchhhhhhccccccC
Q 003869          393 GKFECQ--FCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       393 GPYkC~--~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      +||.|.  .|++.|.+.+.|.+|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            389999  8999999999999999999875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.44  E-value=7.3e-05  Score=55.97  Aligned_cols=31  Identities=23%  Similarity=0.390  Sum_probs=27.5

Q ss_pred             ccCCcccccCC--CCcccCChhHHHHHHHhhhcc
Q 003869          342 VQVRDLFECHK--CEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       342 ~q~EKPyeC~~--CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +.++|||+|.+  |++.|..+++|.+|++ +|++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r-~Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLK-VHTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHH-HHSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHH-hcCC
Confidence            45689999986  9999999999999998 7875

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.56  E-value=2e-05  Score=51.80  Aligned_cols=25  Identities=24%  Similarity=0.545  Sum_probs=23.8

Q ss_pred             cccCCcCccccCCchhhhhhccccc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      ||.|..||++|.+.+.|..|+++|+
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            8999999999999999999999984

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.41  E-value=3.1e-05  Score=55.63  Aligned_cols=30  Identities=20%  Similarity=0.493  Sum_probs=27.0

Q ss_pred             cCC--cccCCc--CccccCCchhhhhhccccccC
Q 003869          391 KDG--KFECQF--CHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       391 HtG--PYkC~~--CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      |++  ||.|.+  |+|.|.+.+.|.+|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            454  999995  999999999999999999875

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.38  E-value=0.00011  Score=63.22  Aligned_cols=35  Identities=17%  Similarity=0.325  Sum_probs=30.4

Q ss_pred             CcccCCc--CccccCCchhhhhhc-cccccCcccCcCC
Q 003869          393 GKFECQF--CHKVFHERRRYNGHV-GIHVRNYVRGIEE  427 (790)
Q Consensus       393 GPYkC~~--CGKsFs~ks~L~rH~-RtHtgE~~~~~~~  427 (790)
                      +||+|.+  |+|+|.+.++|.+|+ ++|+++..+...+
T Consensus        26 KPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           26 RPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             CCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            4999976  999999999999997 6899988766554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.37  E-value=3.5e-05  Score=67.52  Aligned_cols=46  Identities=11%  Similarity=0.075  Sum_probs=39.6

Q ss_pred             cccCCCCCCccccccCC--cccCCcCccccC-Cchhhhhhcccccc-Ccc
Q 003869          377 RYRLGSSVGDGVIIKDG--KFECQFCHKVFH-ERRRYNGHVGIHVR-NYV  422 (790)
Q Consensus       377 ~F~~sssLk~H~RtHtG--PYkC~~CGKsFs-~ks~L~rH~RtHtg-E~~  422 (790)
                      .+.....+..|+++|++  ||.|.+|+|.|. ....|.+|+++|++ +..
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~   54 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDA   54 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCC
Confidence            45556778889999987  999999999999 99999999999987 543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=97.37  E-value=0.0001  Score=51.33  Aligned_cols=30  Identities=13%  Similarity=0.128  Sum_probs=26.6

Q ss_pred             cCCcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          343 QVRDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       343 q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      .+++||.|..|++.|...+.|.+|++ .|.+
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~   32 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIR-EVHG   32 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHH-HTSC
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHH-HHcC
Confidence            45799999999999999999999998 6654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=97.36  E-value=0.00011  Score=51.48  Aligned_cols=31  Identities=26%  Similarity=0.461  Sum_probs=27.0

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +.+++||.|.+|++.|...+.|.+|++ .|.+
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~   32 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLK-VHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHG-GGTS
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHH-HcCC
Confidence            346799999999999999999999988 6654

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.36  E-value=9.7e-05  Score=52.15  Aligned_cols=31  Identities=29%  Similarity=0.544  Sum_probs=27.2

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +.+++||+|.+|++.|...+.|.+|++ .|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~   34 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHML-VHGD   34 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHT-TTST
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHH-HhcC
Confidence            456799999999999999999999988 6654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.36  E-value=0.00011  Score=51.53  Aligned_cols=31  Identities=19%  Similarity=0.281  Sum_probs=27.5

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +.+++||+|.+|++.|.....|.+|++ .|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~   34 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLR-KHTG   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHH-HHTC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHH-HccC
Confidence            456799999999999999999999998 6764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.33  E-value=0.00012  Score=52.51  Aligned_cols=31  Identities=19%  Similarity=0.385  Sum_probs=27.2

Q ss_pred             ccCCcccccCCCCcccCChhHHHHH-HHhhhcc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQH-LLSFHQR  373 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH-~l~~H~r  373 (790)
                      +.+++||+|..|++.|..++.|.+| ++ .|.+
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~-~H~~   35 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQ-KHSN   35 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHH-HTCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHH-HccC
Confidence            5568999999999999999999999 66 7764

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.33  E-value=8.1e-05  Score=66.01  Aligned_cols=36  Identities=28%  Similarity=0.325  Sum_probs=27.0

Q ss_pred             CCCCCccccccCC--cccCCcCccccCCchhhhhhccc
Q 003869          381 GSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHVGI  416 (790)
Q Consensus       381 sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~Rt  416 (790)
                      ...|..|+++|++  ||.|.+|++.|.....|..|+++
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~   41 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE   41 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHH
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHH
Confidence            4567777777776  77777777777777777777776

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.33  E-value=0.00012  Score=51.94  Aligned_cols=31  Identities=19%  Similarity=0.379  Sum_probs=27.6

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +.+++||.|..|++.|....+|.+|++ .|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~-~h~~   34 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIK-TNHP   34 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHH-HHCS
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHH-HHcC
Confidence            456799999999999999999999998 6764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.32  E-value=0.00013  Score=51.41  Aligned_cols=31  Identities=23%  Similarity=0.369  Sum_probs=27.4

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +.+++||+|.+|++.|...+.|.+|++ .|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~   34 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMN-RHST   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHH-HSST
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHH-Hhcc
Confidence            456799999999999999999999988 6754

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.32  E-value=0.00011  Score=48.57  Aligned_cols=26  Identities=23%  Similarity=0.434  Sum_probs=23.8

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhh
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFH  371 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H  371 (790)
                      ++||.|..|++.|...+.|..|++ .|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~-~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLR-TH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHH-HC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHH-Hc
Confidence            479999999999999999999988 55

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.31  E-value=6.3e-05  Score=63.12  Aligned_cols=30  Identities=30%  Similarity=0.579  Sum_probs=27.6

Q ss_pred             CcccCCcCccccCCchhhhhhccccccCcc
Q 003869          393 GKFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +||+|.+|+|+|.++..|.+|+++|+++..
T Consensus        12 kpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A           12 GILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             cCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            399999999999999999999999998654

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=97.30  E-value=1.4e-05  Score=72.65  Aligned_cols=27  Identities=19%  Similarity=0.481  Sum_probs=25.2

Q ss_pred             cCC--cccCCcCccccCCchhhhhhcccc
Q 003869          391 KDG--KFECQFCHKVFHERRRYNGHVGIH  417 (790)
Q Consensus       391 HtG--PYkC~~CGKsFs~ks~L~rH~RtH  417 (790)
                      |++  ||.|.+|+|.|.....|..|+++|
T Consensus        69 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H   97 (129)
T 2wbt_A           69 SKAISQFVCPLCLMPFSSSVSLKQHIRYT   97 (129)
T ss_dssp             HHHHCSEECTTTCCEESSHHHHHHHHHHT
T ss_pred             hCCCCCeECCCCCcccCCHhHHHHHHHHC
Confidence            554  999999999999999999999999

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.29  E-value=5.1e-05  Score=54.28  Aligned_cols=28  Identities=21%  Similarity=0.333  Sum_probs=26.1

Q ss_pred             cccCC--cCccccCCchhhhhhccccccCc
Q 003869          394 KFECQ--FCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       394 PYkC~--~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      ||.|.  .|+++|.+.+.|.+|+++|+++.
T Consensus         6 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   35 (38)
T 1bhi_A            6 PFLCTAPGCGQRFTNEDHLAVHKHKHEMTL   35 (38)
T ss_dssp             CEECCCTTTCCEESSHHHHHHHHHHHHTTT
T ss_pred             ceECCCCCCCcccCCHHHHHHHHHHhCCCC
Confidence            99999  59999999999999999998764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.28  E-value=0.00018  Score=50.53  Aligned_cols=31  Identities=26%  Similarity=0.410  Sum_probs=27.3

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +..+++|.|.+|++.|.....|.+|++ .|.+
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~   34 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKL-LHTA   34 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHH-HHSS
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHH-HhcC
Confidence            345799999999999999999999998 7764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.27  E-value=8.7e-05  Score=49.38  Aligned_cols=26  Identities=15%  Similarity=0.308  Sum_probs=23.7

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhh
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFH  371 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H  371 (790)
                      ++||+|..|++.|...+.|.+|++ .|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~-~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMR-GH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHT-TC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHH-hc
Confidence            479999999999999999999987 55

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.27  E-value=0.00012  Score=48.59  Aligned_cols=27  Identities=22%  Similarity=0.432  Sum_probs=24.3

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ++||.|..|++.|...+.|..|++ .|.
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~-~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYR-VHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHT-TSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHH-hcC
Confidence            479999999999999999999987 554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.26  E-value=6.3e-05  Score=65.94  Aligned_cols=39  Identities=15%  Similarity=0.435  Sum_probs=33.0

Q ss_pred             cccccCC--cccCCcCccccCCchhhhhhccccccCcccCc
Q 003869          387 GVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVRGI  425 (790)
Q Consensus       387 H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~~~  425 (790)
                      |.++|++  ||.|.+|++.|.+...|.+|+++|+++....+
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C   56 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRA   56 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCccc
Confidence            3456886  99999999999999999999999998765433

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.25  E-value=0.00016  Score=50.94  Aligned_cols=31  Identities=26%  Similarity=0.516  Sum_probs=27.2

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +..++||.|.+|++.|.....|.+|++ .|.+
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~   34 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLR-IHTN   34 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHH-HHCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHH-HhCC
Confidence            345799999999999999999999998 7764

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.24  E-value=0.00022  Score=61.22  Aligned_cols=33  Identities=15%  Similarity=0.390  Sum_probs=27.2

Q ss_pred             ccccCCcccccCC--CCcccCChhHHHHHHHhhhc
Q 003869          340 AEVQVRDLFECHK--CEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       340 ~~~q~EKPyeC~~--CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ..+.++|||+|.+  |+|.|.+.++|.+|++.+|+
T Consensus        20 ~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHT   54 (73)
T 1x3c_A           20 TRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHK   54 (73)
T ss_dssp             SSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSS
T ss_pred             ccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCC
Confidence            4456789999976  99999999999999753454

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.24  E-value=0.00014  Score=55.63  Aligned_cols=33  Identities=12%  Similarity=0.284  Sum_probs=28.0

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhccc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT  374 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~  374 (790)
                      |.++|||.|.+|++.|....+|.+|++..|.+.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            456799999999999999999999987567654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.23  E-value=0.00016  Score=51.27  Aligned_cols=31  Identities=16%  Similarity=0.402  Sum_probs=27.3

Q ss_pred             ccCCcccccCCCCcccCCh-hHHHHHHHhhhcc
Q 003869          342 VQVRDLFECHKCEMTFDEK-DTYLQHLLSFHQR  373 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~k-SsLkrH~l~~H~r  373 (790)
                      +.+++||+|..|++.|... +.|.+|++ .|.+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~-~H~~   35 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIW-AHEG   35 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHH-HHHT
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHH-hcCC
Confidence            4567999999999999999 99999998 7764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.22  E-value=0.00017  Score=47.87  Aligned_cols=28  Identities=21%  Similarity=0.579  Sum_probs=25.1

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      ++||.|..|++.|.....|..|++ .|.+
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~-~h~~   28 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLE-THDT   28 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH-TTCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHH-Hhcc
Confidence            479999999999999999999988 6654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=97.20  E-value=0.00011  Score=60.10  Aligned_cols=33  Identities=21%  Similarity=0.324  Sum_probs=29.0

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHHhhhccc
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT  374 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~  374 (790)
                      .|.+++||.|.+||++|...++|.+|++ +|+++
T Consensus        26 ~Ht~ekp~~C~~C~k~F~~~~~L~~H~~-~Htge   58 (60)
T 4gzn_C           26 AHLGYRPRSCPECGKCFRDQSEVNRHLK-VHQNK   58 (60)
T ss_dssp             HHHTCCCEECTTTCCEESSHHHHHHHGG-GGSCC
T ss_pred             HhCCCcCeECCCCCCCcCCHHHHHHHhC-ccCCC
Confidence            4567899999999999999999999988 78753

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.18  E-value=0.00015  Score=53.77  Aligned_cols=26  Identities=23%  Similarity=0.442  Sum_probs=23.8

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHH
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHL  367 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~  367 (790)
                      +.+||||+|.+|+|+|.++++|.+|+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC
Confidence            45689999999999999999999996

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=97.17  E-value=6.7e-05  Score=65.95  Aligned_cols=51  Identities=12%  Similarity=0.182  Sum_probs=43.8

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhccc--------CccccCCCCCCcccc-ccCC--cccCC
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQRT--------TRRYRLGSSVGDGVI-IKDG--KFECQ  398 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r~--------hK~F~~sssLk~H~R-tHtG--PYkC~  398 (790)
                      ++|.|.+|++.|.....|.+|++  |.+.        ++.|.....|..|++ +|++  ||.|.
T Consensus        41 ~~~~C~~C~~~f~~~~~l~~H~~--H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           41 NAAVCPYCSLRFFSPELKQEHES--KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HSBCCTTTCCCBSSHHHHHHHHH--HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHH--cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            68999999999999999999984  7654        578999999999997 8887  88774

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.16  E-value=3e-05  Score=62.71  Aligned_cols=35  Identities=14%  Similarity=0.113  Sum_probs=27.1

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcC
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFC  400 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~C  400 (790)
                      +++|.|..|++.|.....                     |..|+++|++  ||.|.+|
T Consensus        37 ~~~~~C~~C~~~f~~~~~---------------------l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           37 RKTPMCEKCRKDSCQEAA---------------------LNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSSCCCHHHHHTCSCCCS---------------------SCCCSSCCCCCCCSSCCCC
T ss_pred             CCCCCCCCCChhhcCHHH---------------------HHHHHHhhcCCCCCCCCCC
Confidence            478999999988776555                     4555667776  9999988

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=97.16  E-value=3.1e-05  Score=65.14  Aligned_cols=48  Identities=17%  Similarity=0.291  Sum_probs=43.5

Q ss_pred             CccccCCCCCCccccccCC--cccCC--cCccccCCchhhhhhccccccCcc
Q 003869          375 TRRYRLGSSVGDGVIIKDG--KFECQ--FCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       375 hK~F~~sssLk~H~RtHtG--PYkC~--~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ++.|.....|..|+++|.+  ||.|.  .|++.|.....|..|+++|+++..
T Consensus        14 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   65 (89)
T 2wbs_A           14 GKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRP   65 (89)
T ss_dssp             CCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCC
T ss_pred             CCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCC
Confidence            5788888999999999997  99997  599999999999999999987654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.14  E-value=0.00023  Score=49.83  Aligned_cols=28  Identities=25%  Similarity=0.537  Sum_probs=25.0

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhccc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQRT  374 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r~  374 (790)
                      +||.|.+|++.|...++|..|++ +|.+.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~-~H~~~   28 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHIT-LHELL   28 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHH-HHTTT
T ss_pred             CcccCCCCCchhCCHHHHHHHHH-HhCCC
Confidence            58999999999999999999998 67643

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.14  E-value=0.00015  Score=54.93  Aligned_cols=29  Identities=24%  Similarity=0.474  Sum_probs=27.3

Q ss_pred             cccCCcCccccCCchhhhhhccccccCcc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ||.|.+|++.|.+...|.+|+++|+++..
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   40 (48)
T 2epr_A           12 QVACEICGKIFRDVYHLNRHKLSHSGEKP   40 (48)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             CeeCCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            99999999999999999999999997754

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.13  E-value=9.9e-05  Score=48.97  Aligned_cols=26  Identities=35%  Similarity=0.781  Sum_probs=24.6

Q ss_pred             cccCC--cCccccCCchhhhhhcccccc
Q 003869          394 KFECQ--FCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       394 PYkC~--~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      ||.|.  .|++.|...+.|..|+++|++
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            79999  999999999999999999974

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=97.12  E-value=0.00015  Score=59.37  Aligned_cols=36  Identities=22%  Similarity=0.368  Sum_probs=32.0

Q ss_pred             cccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          387 GVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       387 H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      +.++|++  ||.|.+|++.|.....|.+|+++|+++..
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~   42 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKP   42 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCC
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCC
Confidence            5567886  99999999999999999999999987654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.10  E-value=0.00024  Score=47.12  Aligned_cols=27  Identities=30%  Similarity=0.641  Sum_probs=24.4

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +||.|..|++.|...+.|..|++ .|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~-~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHIL-LHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHT-GGGS
T ss_pred             CCccCCCCCchhCCHHHHHHHHH-HhcC
Confidence            58999999999999999999988 6764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.09  E-value=0.00031  Score=46.48  Aligned_cols=27  Identities=22%  Similarity=0.506  Sum_probs=24.4

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +||.|..|++.|...+.|..|++ .|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~-~h~~   27 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYR-SHTN   27 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHH-HHSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHH-HhcC
Confidence            58999999999999999999998 6764

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=97.07  E-value=0.00012  Score=59.01  Aligned_cols=39  Identities=10%  Similarity=0.147  Sum_probs=33.5

Q ss_pred             CCccccccCC--cccCCcCccccCCchhhhhhccccccCcccCc
Q 003869          384 VGDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVRGI  425 (790)
Q Consensus       384 Lk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~~~  425 (790)
                      |..|+++|++  ||.|+.|+++|.+...|.   ++|+++..-..
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C   42 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRC   42 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEEC
Confidence            6789999997  999999999999998886   88988765443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.07  E-value=0.00029  Score=59.12  Aligned_cols=32  Identities=22%  Similarity=0.409  Sum_probs=28.1

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhccc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT  374 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~  374 (790)
                      +..+|||+|.+|+|.|.++++|.+|++ +|.+.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r-~Htg~   39 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEA-QHGVT   39 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHH-HHTTT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhh-hhCCC
Confidence            556899999999999999999999998 67653

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=97.06  E-value=0.00027  Score=61.74  Aligned_cols=32  Identities=16%  Similarity=0.234  Sum_probs=28.9

Q ss_pred             cccCCcCccccCCchhhhhhccccccCcccCc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRNYVRGI  425 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~~~  425 (790)
                      +|.|++|+|.|.++..|.+|+++|+++..-.+
T Consensus        28 ~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C   59 (85)
T 2lv2_A           28 CHLCPVCGESFASKGAQERHLRLLHAAQVFPC   59 (85)
T ss_dssp             TEECTTSCCEESSHHHHHHHHHTTSCSSSEEC
T ss_pred             CEECCCCCCCcCcHHHHhhhhhhccCCCccCC
Confidence            89999999999999999999999998765433

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=97.04  E-value=5.5e-05  Score=65.02  Aligned_cols=48  Identities=19%  Similarity=0.301  Sum_probs=43.5

Q ss_pred             CccccCCCCCCccccccCC--cccCC--cCccccCCchhhhhhccccccCcc
Q 003869          375 TRRYRLGSSVGDGVIIKDG--KFECQ--FCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       375 hK~F~~sssLk~H~RtHtG--PYkC~--~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ++.|.....|..|++.|.+  +|.|.  .|++.|.....|.+|+++|+++..
T Consensus        24 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   75 (100)
T 2ebt_A           24 TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP   75 (100)
T ss_dssp             CCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCS
T ss_pred             CCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            6788888999999999997  99996  699999999999999999997754

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.04  E-value=0.0003  Score=46.27  Aligned_cols=27  Identities=22%  Similarity=0.527  Sum_probs=24.4

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +||.|..|++.|...+.|..|++ .|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~-~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLK-IHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHH-HHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHHHH-Hhcc
Confidence            58999999999999999999998 6764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=96.98  E-value=0.00034  Score=46.17  Aligned_cols=27  Identities=22%  Similarity=0.551  Sum_probs=24.4

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +||.|..|++.|.....|..|++ .|.+
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~-~H~~   27 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLR-IHSG   27 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHH-HHHT
T ss_pred             CCccCCCCCCccCChhHHHHHHH-HhcC
Confidence            58999999999999999999998 6764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.98  E-value=0.00045  Score=47.24  Aligned_cols=28  Identities=21%  Similarity=0.533  Sum_probs=25.1

Q ss_pred             CcccccC--CCCcccCChhHHHHHHHhhhcc
Q 003869          345 RDLFECH--KCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       345 EKPyeC~--~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      ++||.|.  .|++.|...+.|.+|++ .|.+
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~-~H~~   30 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKK-SHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHG-GGTC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHH-HccC
Confidence            4799999  89999999999999998 6764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=96.95  E-value=8.3e-05  Score=65.70  Aligned_cols=31  Identities=16%  Similarity=0.265  Sum_probs=27.3

Q ss_pred             CcccCCcCcccc-CCchhhhhhccccccCcccC
Q 003869          393 GKFECQFCHKVF-HERRRYNGHVGIHVRNYVRG  424 (790)
Q Consensus       393 GPYkC~~CGKsF-s~ks~L~rH~RtHtgE~~~~  424 (790)
                      +||.|++|+|.| .....|..|+++| ++..-.
T Consensus        33 ~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~   64 (96)
T 2ctd_A           33 GSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFT   64 (96)
T ss_dssp             SCEECTTTCSCEESSHHHHHHHHHHH-CCCCCC
T ss_pred             CCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeE
Confidence            399999999999 9999999999999 765433

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=96.93  E-value=0.00052  Score=45.47  Aligned_cols=27  Identities=15%  Similarity=0.468  Sum_probs=24.1

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +||.|.+|++.|...+.|..|++ .|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~-~h~~   27 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIK-TKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHH-HHTS
T ss_pred             CCccCCCCCCccCCHHHHHHHHH-HHcc
Confidence            58999999999999999999998 6654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=96.92  E-value=0.00041  Score=45.31  Aligned_cols=26  Identities=31%  Similarity=0.645  Sum_probs=22.6

Q ss_pred             ccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          347 LFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      ||+|..|++.|...+.|.+|++ .|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~-~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQR-VHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGG-GTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHH-HcCC
Confidence            6899999999999999999987 6653

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=96.92  E-value=0.00049  Score=49.18  Aligned_cols=31  Identities=19%  Similarity=0.428  Sum_probs=27.0

Q ss_pred             ccCCcccccCC--CCcccCChhHHHHHHHhhhcc
Q 003869          342 VQVRDLFECHK--CEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       342 ~q~EKPyeC~~--CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +.+++||.|.+  |++.|...+.|.+|++ .|.+
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLR-WHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHH-HHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHH-hcCC
Confidence            45679999995  9999999999999998 7764

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=95.97  E-value=0.00014  Score=48.64  Aligned_cols=28  Identities=18%  Similarity=0.502  Sum_probs=24.6

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      ++||.|..|++.|....+|..|++ .|.+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~-~h~~   28 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVR-IHTG   28 (30)
Confidence            479999999999999999999988 5653

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.93  E-value=0.00015  Score=47.41  Aligned_cols=25  Identities=20%  Similarity=0.580  Sum_probs=22.7

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhh
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFH  371 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H  371 (790)
                      |||.|..|++.|...+.|..|++ .|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~-~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIR-HH   25 (26)
Confidence            58999999999999999999987 45

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.88  E-value=0.0005  Score=45.93  Aligned_cols=28  Identities=21%  Similarity=0.608  Sum_probs=23.7

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +||.|..|++.|...+.|.+|+...|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccC
Confidence            5899999999999999999994336764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=95.86  E-value=0.00019  Score=47.96  Aligned_cols=27  Identities=19%  Similarity=0.470  Sum_probs=23.9

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +||.|..|++.|...++|..|++ .|.+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~-~H~~   27 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVR-QHTG   27 (29)
Confidence            58999999999999999999987 6653

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=96.81  E-value=0.00057  Score=53.08  Aligned_cols=32  Identities=16%  Similarity=0.251  Sum_probs=28.1

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      .+.+++||.|..|++.|...+.|.+|++ +|.+
T Consensus        18 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~   49 (54)
T 1yui_A           18 RSQSEQPATCPICYAVIRQSRNLRRHLE-LRHF   49 (54)
T ss_dssp             HHTSSCCEECTTTCCEESSHHHHHHHHH-HHTT
T ss_pred             hcCCCCCccCCCCCcccCCHHHHHHHHH-Hhcc
Confidence            4556899999999999999999999998 6764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=96.81  E-value=0.00064  Score=46.22  Aligned_cols=27  Identities=26%  Similarity=0.459  Sum_probs=24.2

Q ss_pred             cccccC--CCCcccCChhHHHHHHHhhhcc
Q 003869          346 DLFECH--KCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       346 KPyeC~--~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +||.|.  .|++.|...+.|..|++ .|.+
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~-~H~~   29 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKR-THTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHT-TTSC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHH-HhcC
Confidence            589998  99999999999999988 6764

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=96.78  E-value=0.00041  Score=62.62  Aligned_cols=25  Identities=20%  Similarity=0.487  Sum_probs=22.9

Q ss_pred             CCcccccCCCCcccCChhHHHHH-HH
Q 003869          344 VRDLFECHKCEMTFDEKDTYLQH-LL  368 (790)
Q Consensus       344 ~EKPyeC~~CgKtF~~kSsLkrH-~l  368 (790)
                      +++||.|.+|++.|..++.|.+| ++
T Consensus        47 ~ekpf~C~~Cgk~F~~~~~L~~H~~r   72 (102)
T 2ghf_A           47 LNSSYVCVECNFLTKRYDALSEHNLK   72 (102)
T ss_dssp             CSCCEEETTTTEEESSTHHHHTHHHH
T ss_pred             CCCCcCCCCCCcccCCHHHHHHHHHH
Confidence            46899999999999999999999 56

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.78  E-value=0.00055  Score=53.27  Aligned_cols=35  Identities=26%  Similarity=0.460  Sum_probs=29.5

Q ss_pred             ccCC--cccCCcCccccCCchhhhhhcc-ccccCcccC
Q 003869          390 IKDG--KFECQFCHKVFHERRRYNGHVG-IHVRNYVRG  424 (790)
Q Consensus       390 tHtG--PYkC~~CGKsFs~ks~L~rH~R-tHtgE~~~~  424 (790)
                      .|++  ||.|.+|++.|.+...|.+|++ +|+++....
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~   43 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHK   43 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCcc
Confidence            3454  9999999999999999999997 998876533

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=96.73  E-value=0.00075  Score=48.03  Aligned_cols=30  Identities=23%  Similarity=0.385  Sum_probs=26.1

Q ss_pred             cCCcccccC--CCCcccCChhHHHHHHHhhhcc
Q 003869          343 QVRDLFECH--KCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       343 q~EKPyeC~--~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      .+++||.|.  .|++.|...++|.+|++ .|.+
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~   33 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKH-KHEM   33 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHH-HHHT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHH-HhCC
Confidence            357999999  59999999999999998 6764

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=96.57  E-value=0.00077  Score=54.66  Aligned_cols=29  Identities=17%  Similarity=0.240  Sum_probs=27.3

Q ss_pred             cccCCcCccccCCchhhhhhccccccCcc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ||.|.+|++.|.....|.+|+++|+++..
T Consensus         9 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   37 (70)
T 1x5w_A            9 PEKCSECSYSCSSKAALRIHERIHCTDRP   37 (70)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCCSCS
T ss_pred             CeECCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            99999999999999999999999987754

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=96.55  E-value=0.00047  Score=55.04  Aligned_cols=34  Identities=24%  Similarity=0.575  Sum_probs=28.6

Q ss_pred             cccCC--cccCCcCccccCCchhhhhhccc-c-ccCcc
Q 003869          389 IIKDG--KFECQFCHKVFHERRRYNGHVGI-H-VRNYV  422 (790)
Q Consensus       389 RtHtG--PYkC~~CGKsFs~ks~L~rH~Rt-H-tgE~~  422 (790)
                      ++|++  ||.|..|++.|.....|..|+++ | +++..
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~   40 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV   40 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcC
Confidence            46775  99999999999999999999998 7 45443

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=96.53  E-value=0.0013  Score=54.23  Aligned_cols=37  Identities=16%  Similarity=0.320  Sum_probs=30.6

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccCcc
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .+.+.+.+  ||.|.+|++.|.....|.+|+++|+++..
T Consensus         8 ~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   46 (77)
T 2cot_A            8 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKP   46 (77)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCS
T ss_pred             CCcCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcC
Confidence            33444554  99999999999999999999999987654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=96.53  E-value=0.00055  Score=50.75  Aligned_cols=24  Identities=21%  Similarity=0.470  Sum_probs=21.9

Q ss_pred             CcccCCcCccccCCchhhhhhccc
Q 003869          393 GKFECQFCHKVFHERRRYNGHVGI  416 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~Rt  416 (790)
                      +||+|.+|||+|.++++|.+|+.-
T Consensus         7 kp~~C~~CgK~F~~~s~L~~H~py   30 (36)
T 1fv5_A            7 ARFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCCEETTTTEECSCHHHHHHHHHH
T ss_pred             cCeECCCCCCccCCHhHccCcCCe
Confidence            399999999999999999999843

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=96.52  E-value=0.00014  Score=50.60  Aligned_cols=26  Identities=23%  Similarity=0.420  Sum_probs=21.4

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      +||+|..|++.|...++|.+|++ +|.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~-~H~   26 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIK-TAF   26 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTT-SSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHH-HHc
Confidence            58999999999998888877765 454

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.47  E-value=0.0012  Score=43.56  Aligned_cols=26  Identities=23%  Similarity=0.673  Sum_probs=23.5

Q ss_pred             cccccC--CCCcccCChhHHHHHHHhhhc
Q 003869          346 DLFECH--KCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       346 KPyeC~--~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      +||.|.  .|++.|...+.|..|++ .|.
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~-~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKK-IHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHG-GGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHH-HhC
Confidence            579999  99999999999999988 664

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.47  E-value=0.00051  Score=56.83  Aligned_cols=29  Identities=21%  Similarity=0.482  Sum_probs=27.0

Q ss_pred             cCC--cccCCcCccccCCchhhhhhcccccc
Q 003869          391 KDG--KFECQFCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       391 HtG--PYkC~~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      |++  ||+|.+|++.|.....|.+|+++|++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAE   32 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhc
Confidence            555  99999999999999999999999986

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=96.44  E-value=0.001  Score=52.10  Aligned_cols=29  Identities=21%  Similarity=0.539  Sum_probs=26.9

Q ss_pred             cccCCcCccccCCchhhhhhccccccCcc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ||.|..|++.|.....|.+|+++|+++..
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   30 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKP   30 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCS
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCC
Confidence            89999999999999999999999987654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=96.42  E-value=0.0012  Score=49.95  Aligned_cols=32  Identities=25%  Similarity=0.443  Sum_probs=27.8

Q ss_pred             cccCCcccccC--CCCcccCChhHHHHHHHhhhcc
Q 003869          341 EVQVRDLFECH--KCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       341 ~~q~EKPyeC~--~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      .+.+++||.|.  .|++.|...++|.+|++ .|.+
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~-~H~~   45 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQ-THLE   45 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHH-HHTT
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHHH-HccC
Confidence            35678999996  79999999999999998 7764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=96.41  E-value=0.00098  Score=51.48  Aligned_cols=29  Identities=17%  Similarity=0.315  Sum_probs=26.9

Q ss_pred             cccCCcCccccCCchhhhhhccccccCcc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ||.|..|++.|.....|..|+++|+++..
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~   29 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRP   29 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCC
Confidence            79999999999999999999999997654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=96.32  E-value=0.00087  Score=51.78  Aligned_cols=29  Identities=28%  Similarity=0.492  Sum_probs=26.2

Q ss_pred             cccCCcCccccCCchhhhhhccccccCcc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ||.|..|++.|.....|..|+++|+++..
T Consensus         4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   32 (57)
T 3uk3_C            4 SRECSYCGKFFRSNYYLNIHLRTHTGEKP   32 (57)
T ss_dssp             -CBCTTTCCBCSCHHHHHHHHHHHHCCCC
T ss_pred             CccCCCCcchhCChHHHHHHHHHcCCCCC
Confidence            89999999999999999999999987654

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.05  E-value=0.003  Score=53.68  Aligned_cols=24  Identities=25%  Similarity=0.450  Sum_probs=21.8

Q ss_pred             cccCCCCcccCChhHHHHHHHhhhc
Q 003869          348 FECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       348 yeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      |.|.+|++.|.....|.+|++ +|.
T Consensus        63 ~~C~~C~k~f~~~~~L~~H~~-~H~   86 (95)
T 2ej4_A           63 EECPREGKSFKAKYKLVNHIR-VHT   86 (95)
T ss_dssp             TTCSSTTCCCSSHHHHHHHHH-HHH
T ss_pred             cCCCCCCcccCCHHHHHHHHH-hcC
Confidence            999999999999999999988 454

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=96.05  E-value=0.003  Score=51.67  Aligned_cols=31  Identities=16%  Similarity=0.380  Sum_probs=27.2

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +.++++|+|.+|++.|.....|.+|++ .|.+
T Consensus        40 H~~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~   70 (74)
T 2lce_A           40 HTGEKPYRCNICGAQFNRPANLKTHTR-IHSG   70 (74)
T ss_dssp             HCCCCSEECTTTCCEESCHHHHHHHHH-HHCC
T ss_pred             cCCCCCEECCCCCchhCCHHHHHHHHH-hcCC
Confidence            445789999999999999999999998 6764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=95.14  E-value=0.0055  Score=49.70  Aligned_cols=29  Identities=21%  Similarity=0.531  Sum_probs=26.5

Q ss_pred             cccCC--cCccccCCchhhhhhccccccCcc
Q 003869          394 KFECQ--FCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       394 PYkC~--~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ||.|+  .|++.|.....|.+|+++|+++..
T Consensus        19 ~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~   49 (73)
T 1f2i_G           19 PYACPVESCDRRFSRSDELTRHIRIHTGQKP   49 (73)
T ss_dssp             CEECSSTTBCCEESSHHHHHHHHHHHHCCCC
T ss_pred             ccCCcCCCCCCccCCHHHHHHHHHhhCCCCC
Confidence            99997  599999999999999999987654

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=95.12  E-value=0.0084  Score=48.58  Aligned_cols=30  Identities=17%  Similarity=0.369  Sum_probs=27.4

Q ss_pred             cccCCc--CccccCCchhhhhhccccccCccc
Q 003869          394 KFECQF--CHKVFHERRRYNGHVGIHVRNYVR  423 (790)
Q Consensus       394 PYkC~~--CGKsFs~ks~L~rH~RtHtgE~~~  423 (790)
                      +|.|..  |++.|.....|.+|+++|+++..-
T Consensus        17 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~   48 (72)
T 2epa_A           17 SHICSHPGCGKTYFKSSHLKAHTRTHTGEKPF   48 (72)
T ss_dssp             CEECSSTTTCCEESSHHHHHHHHHHHSSSCSE
T ss_pred             ceeCCCCCCccccCCHHHHHHHHHhcCCCCCc
Confidence            999998  999999999999999999877543

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.96  E-value=0.006  Score=51.42  Aligned_cols=43  Identities=12%  Similarity=-0.014  Sum_probs=36.2

Q ss_pred             CCCCCccccccCC--cccCCcCccccCCchhhhhhccccccCcccCc
Q 003869          381 GSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNYVRGI  425 (790)
Q Consensus       381 sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~~~~~  425 (790)
                      +..|..|+++|.+  ||.|..|++.|. ...|..|+ .|.++.....
T Consensus         2 ~~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C   46 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELC   46 (75)
T ss_dssp             CCCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEEC
T ss_pred             chHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEc
Confidence            4678999999997  999999999995 89999999 8877665333

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.55  E-value=0.011  Score=47.39  Aligned_cols=29  Identities=17%  Similarity=0.177  Sum_probs=25.8

Q ss_pred             cCCcccccC-CCCcccCChhHHHHHHHhhhc
Q 003869          343 QVRDLFECH-KCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       343 q~EKPyeC~-~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      .+++||.|. .|++.|..++.|.+|++ .|.
T Consensus        32 ~~~~p~~C~~~C~k~f~~~~~L~~H~~-~hc   61 (66)
T 2eod_A           32 CPRLPVACPNQCGVGTVAREDLPGHLK-DSC   61 (66)
T ss_dssp             CSSSEEECTTCCSCCEEETTTHHHHHH-TTS
T ss_pred             cCCcCccCCcccCcccccHHHHHHHHH-hhc
Confidence            357999999 99999999999999988 664

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=93.41  E-value=0.047  Score=51.08  Aligned_cols=67  Identities=15%  Similarity=0.265  Sum_probs=48.1

Q ss_pred             cccccCCCCcccCChhHHHHHHH-hhhccc---------------CccccCCCCCCccccccCC--cccCCcCccccCCc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLL-SFHQRT---------------TRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHER  407 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l-~~H~r~---------------hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~k  407 (790)
                      +++.|..|+..|...+.+..|.. ..|...               ++.|..    ..+...+.+  .|.|..|.+.|...
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKA----APAEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSC----CSSCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCC----CccccccCCCCCeEcCCCCCEeCCH
Confidence            67999999999999999999983 135432               112221    112223333  89999999999999


Q ss_pred             hhhhhhccc
Q 003869          408 RRYNGHVGI  416 (790)
Q Consensus       408 s~L~rH~Rt  416 (790)
                      ..|..|...
T Consensus       107 ~~~~~H~~g  115 (127)
T 1zu1_A          107 VVAESHYIG  115 (127)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHCC
Confidence            999999753

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=92.15  E-value=0.031  Score=52.61  Aligned_cols=30  Identities=17%  Similarity=0.264  Sum_probs=26.3

Q ss_pred             ccccCC--cccCCcCccccCCchhhhhhcccc
Q 003869          388 VIIKDG--KFECQFCHKVFHERRRYNGHVGIH  417 (790)
Q Consensus       388 ~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtH  417 (790)
                      -..|+|  ||.|..|+|.|.+.+.|..|+++.
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            345666  999999999999999999999875

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=90.44  E-value=0.19  Score=41.47  Aligned_cols=54  Identities=15%  Similarity=0.204  Sum_probs=42.2

Q ss_pred             CCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC-cccCC--cCccccCCchhhhhhcccc
Q 003869          351 HKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG-KFECQ--FCHKVFHERRRYNGHVGIH  417 (790)
Q Consensus       351 ~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG-PYkC~--~CGKsFs~ks~L~rH~RtH  417 (790)
                      ..|++.|.....|..|+...|.+...             ...+ +|.|.  .|++.+.....|..|++++
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~-------------~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDF-------------KHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCC-------------CCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCccc-------------CCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            35999999999999998656764310             1122 89997  7999999999999999864

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=89.33  E-value=0.11  Score=48.99  Aligned_cols=28  Identities=18%  Similarity=0.379  Sum_probs=25.3

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHH
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      .+.+++||.|..|++.|.+.++|..|++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            4567899999999999999999999976

>1v65_A Riken cDNA 2610044O15; transcriptional repressor, heterochromatin, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.212.1.1

Probab=86.26  E-value=0.063  Score=41.95  Aligned_cols=32  Identities=13%  Similarity=0.053  Sum_probs=28.2

Q ss_pred             ceeecCCCeEEeeeccC-CCCCchHHHHhhhhc
Q 003869          168 LVMVNKNGSVVDIVDLG-SLEDPYGEELRRRTE  199 (790)
Q Consensus       168 ~~~~~~~gv~vd~~~~~-~~~dp~~~el~r~~~  199 (790)
                      ...+++.+|+|+|+..+ .++||.++.|||.+|
T Consensus         5 ~~~~~f~dva~~fs~eew~~l~~~qk~ly~~v~   37 (64)
T 1v65_A            5 SSGVTYDDVHMNFTEEEWDLLDSSQKRLYEEVM   37 (64)
T ss_dssp             CSCCCCCCCTTCCCHHHHHTSCHHHHHHHHHHH
T ss_pred             CCccccceeEEecCHHHHhCCCHHHhhheeehh
Confidence            34589999999998877 789999999999987

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.16  E-value=0.37  Score=38.21  Aligned_cols=28  Identities=21%  Similarity=0.453  Sum_probs=24.2

Q ss_pred             CcccCCcCccccCCchhhhhhccccccC
Q 003869          393 GKFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      ++|.|+.|++.|.....|++||+---++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~   38 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPE   38 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcc
Confidence            3899999999999999999999855433

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.03  E-value=0.64  Score=36.87  Aligned_cols=23  Identities=17%  Similarity=0.421  Sum_probs=21.8

Q ss_pred             cccccCCCCcccCChhHHHHHHH
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      .+|.|+.|++.|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            67999999999999999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	790
d1qk9a_	92	d.10.1.3 (A:) Methyl-CpG-binding protein 2, MECP2	4e-06
d1ig4a_	75	d.10.1.3 (A:) Methylation-dependent transcriptiona	0.002

>d1qk9a_ d.10.1.3 (A:) Methyl-CpG-binding protein 2, MECP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 92

class: Alpha and beta proteins (a+b)
fold: DNA-binding domain
superfamily: DNA-binding domain
family: Methyl-CpG-binding domain, MBD
domain: Methyl-CpG-binding protein 2, MECP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (103), Expect = 4e-06
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 221 SRRKKRKIVDADLLGD--TLPVGWKLLLGLKRREGRASVYCRRYISPGGQHFVSCKEVSG 278
            ++++  I D   + D  TLP GW   L  ++    A  Y    I+P G+ F S  E+  
Sbjct: 5   PKQRRSIIRDRGPMYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIA 64

Query: 279 YLQS 282
           Y + 
Sbjct: 65  YFEK 68

>d1ig4a_ d.10.1.3 (A:) Methylation-dependent transcriptional repressor MBD1/PCM1 {Human (Homo sapiens) [TaxId: 9606]} Length = 75

class: Alpha and beta proteins (a+b)
fold: DNA-binding domain
superfamily: DNA-binding domain
family: Methyl-CpG-binding domain, MBD
domain: Methylation-dependent transcriptional repressor MBD1/PCM1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 6/54 (11%)

Query: 238 LPVGWKLLLGLKRR---EGRASVYCRRYISPGGQHFVSCKEVSGYLQSYFGLND 288
           L  GWK     ++     GR+  Y   Y SP G    S  E++ YL     L  
Sbjct: 11  LGPGWKRREVFRKSGATCGRSDTY---YQSPTGDRIRSKVELTRYLGPACDLTL 61

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	790
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.24
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.83
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.6
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.56
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.47
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.46
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.41
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.34
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.32
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.3
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.27
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.25
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.23
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.22
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.21
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.13
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.13
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.11
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.07
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.06
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.05
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.03
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.03
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.01
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.99
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.97
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.87
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.81
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.76
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.7
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.66
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.65
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.62
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.48
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.36
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.34
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.29
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	97.28
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.21
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	97.16
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.08
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.91
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.79
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	96.77
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.75
d1v65a_	64	hypotheical protein 2610044O15Rik {Mouse (Mus musc	96.43
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.23
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.16
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.06
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.0
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	95.99
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.96
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.88
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.76
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	95.65
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.48
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.44
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.88
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.87
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	94.74
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.7
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	94.63
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	94.6
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.05
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.82
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	93.66
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.65
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	93.52
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.26
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	92.94
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	92.84
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	92.65
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	91.95
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	91.74
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	91.58
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.26
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	91.12
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.04
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	91.02
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	90.98
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	90.59
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	89.93
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	89.71
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	87.79
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	87.47
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	87.43
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	86.35
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	86.24
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	85.37
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	83.75
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	83.3
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	82.35
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	82.28
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	80.65
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	80.31

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.5e-12  Score=102.76  Aligned_cols=51  Identities=29%  Similarity=0.701  Sum_probs=47.1

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhcccCccccCCCCCCccccccCC--cccCCcCccccCCchhhhhhcccc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDG--KFECQFCHKVFHERRRYNGHVGIH  417 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~hK~F~~sssLk~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtH  417 (790)
                      ||||+| .||+.|....+|.+|++ +                    |++  ||.|.+||++|.+.+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~-~--------------------Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMS-M--------------------HLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHH-H--------------------HSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhh-c--------------------cccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            699999 59999999999999988 4                    554  999999999999999999999998

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=4.9e-10  Score=83.10  Aligned_cols=35  Identities=17%  Similarity=0.376  Sum_probs=33.6

Q ss_pred             ccccccCC--cccCCcCccccCCchhhhhhccccccC
Q 003869          386 DGVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       386 ~H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      +|+++|++  ||+|.+|||+|.+.++|.+|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            68999998  999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=4.8e-09  Score=75.49  Aligned_cols=31  Identities=26%  Similarity=0.523  Sum_probs=29.1

Q ss_pred             ccCC--cccCCcCccccCCchhhhhhccccccC
Q 003869          390 IKDG--KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       390 tHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      +|+|  ||+|.+|||+|.+++.|.+|+|+|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            4776  999999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.56  E-value=8.8e-09  Score=75.80  Aligned_cols=33  Identities=21%  Similarity=0.377  Sum_probs=31.3

Q ss_pred             cccccCC--cccCCcCccccCCchhhhhhcccccc
Q 003869          387 GVIIKDG--KFECQFCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       387 H~RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      |.|+|+|  ||+|.+|+|+|.++++|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            7899998  99999999999999999999999974

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=1.6e-08  Score=73.93  Aligned_cols=33  Identities=18%  Similarity=0.417  Sum_probs=30.3

Q ss_pred             cccCC--cccCCcCccccCCchhhhhhccccccCc
Q 003869          389 IIKDG--KFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       389 RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      |+|+|  ||+|.+|||+|.+++.|.+|+++|+++.
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            57888  9999999999999999999999998653

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.46  E-value=2.1e-08  Score=70.06  Aligned_cols=28  Identities=21%  Similarity=0.579  Sum_probs=26.9

Q ss_pred             cccCCcCccccCCchhhhhhccccccCc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      ||.|++|+|+|.++++|.+|+++|+||.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCCC
Confidence            8999999999999999999999999974

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=3.4e-08  Score=68.99  Aligned_cols=29  Identities=28%  Similarity=0.518  Sum_probs=27.2

Q ss_pred             CcccCCcCccccCCchhhhhhccccccCc
Q 003869          393 GKFECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      +||.|.+|||+|.++++|.+|+|+|+||.
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            38999999999999999999999999874

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.34  E-value=5.7e-08  Score=70.65  Aligned_cols=30  Identities=23%  Similarity=0.653  Sum_probs=27.6

Q ss_pred             cCC--cccCCcCccccCCchhhhhhccccccC
Q 003869          391 KDG--KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       391 HtG--PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      |+|  ||+|++|+|+|.++++|++|+|+|+.+
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            566  999999999999999999999999854

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.32  E-value=3.8e-08  Score=68.25  Aligned_cols=27  Identities=22%  Similarity=0.629  Sum_probs=25.9

Q ss_pred             CcccCCcCccccCCchhhhhhcccccc
Q 003869          393 GKFECQFCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      +||+|.+|+|+|.++++|.+|+|+|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            499999999999999999999999986

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.30  E-value=5.9e-08  Score=74.94  Aligned_cols=40  Identities=30%  Similarity=0.571  Sum_probs=35.1

Q ss_pred             CCCCCccccccCC--cccCCc--CccccCCchhhhhhccccccCc
Q 003869          381 GSSVGDGVIIKDG--KFECQF--CHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       381 sssLk~H~RtHtG--PYkC~~--CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      +..|..|++ |++  ||.|.+  |+|+|.++++|.+|+++|+||.
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            456777885 887  999987  9999999999999999999874

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=1.9e-07  Score=69.36  Aligned_cols=29  Identities=24%  Similarity=0.514  Sum_probs=24.9

Q ss_pred             CCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          344 VRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       344 ~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      .+|||+|.+|||.|...++|++|++.+|+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht   30 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHT   30 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccC
Confidence            36999999999999999999999763344

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=6.5e-08  Score=65.85  Aligned_cols=26  Identities=27%  Similarity=0.548  Sum_probs=24.7

Q ss_pred             CcccCCcCccccCCchhhhhhccccc
Q 003869          393 GKFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      +||+|.+|||+|.+++.|.+|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            39999999999999999999999996

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=1.1e-07  Score=69.38  Aligned_cols=31  Identities=23%  Similarity=0.474  Sum_probs=27.1

Q ss_pred             cccCC--cccCCcCccccCCchhhhhhcccccc
Q 003869          389 IIKDG--KFECQFCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       389 RtHtG--PYkC~~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      |+|+|  ||+|++|+|+|.++++|++|++.|++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            57888  99999999999999999999865443

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.22  E-value=2.1e-07  Score=64.38  Aligned_cols=28  Identities=25%  Similarity=0.562  Sum_probs=25.9

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      ||||+|.+|+|.|.++++|.+|++ +|++
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r-~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIR-THTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH-HHHC
T ss_pred             CcCccCCCCcCEecccccccccCC-CccC
Confidence            699999999999999999999999 7764

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=3.1e-07  Score=65.87  Aligned_cols=32  Identities=19%  Similarity=0.397  Sum_probs=29.0

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhccc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT  374 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~  374 (790)
                      |.++|||+|.+|||+|.++++|.+|++ +|+++
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r-~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQR-VHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHH-GGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhcc-ccCCC
Confidence            467899999999999999999999999 88764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.13  E-value=5.5e-07  Score=65.33  Aligned_cols=31  Identities=26%  Similarity=0.461  Sum_probs=28.2

Q ss_pred             ccCCcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          342 VQVRDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       342 ~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      +.+||||+|.+|+|.|.++++|++|++ +|+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r-~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLK-VHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHG-GGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHcc-ccCC
Confidence            467899999999999999999999998 7864

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=2.8e-07  Score=64.78  Aligned_cols=28  Identities=21%  Similarity=0.555  Sum_probs=26.5

Q ss_pred             CcccCCc--CccccCCchhhhhhccccccC
Q 003869          393 GKFECQF--CHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       393 GPYkC~~--CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      +||.|.+  |+|+|.+.++|++|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            3899999  999999999999999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=7.9e-07  Score=65.48  Aligned_cols=34  Identities=18%  Similarity=0.401  Sum_probs=30.2

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhhccc
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQRT  374 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r~  374 (790)
                      ..+.++|||+|.+|||+|.+.++|.+|++ +|+++
T Consensus         5 ~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r-~HtGE   38 (38)
T d2cota2           5 WQQRERRRYKCDECGKSFSHSSDLSKHRR-THTGE   38 (38)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHT-TTCCS
T ss_pred             cccCCCCCEecCCCCceeeCHHHHHHhCc-cCCCC
Confidence            45667999999999999999999999999 88764

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=2.7e-07  Score=64.81  Aligned_cols=28  Identities=36%  Similarity=0.672  Sum_probs=26.3

Q ss_pred             CcccCCc--CccccCCchhhhhhccccccC
Q 003869          393 GKFECQF--CHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       393 GPYkC~~--CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      +||.|++  |+|+|.+.++|++|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            3899988  999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.06  E-value=1.2e-06  Score=64.13  Aligned_cols=34  Identities=21%  Similarity=0.328  Sum_probs=30.4

Q ss_pred             cccccCCcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          339 LAEVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       339 l~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      .+.+.+||||+|.+|+++|.++++|.+|++ .|..
T Consensus         3 ~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r-~H~~   36 (37)
T d1p7aa_           3 TRGSTGIKPFQCPDCDRSFSRSDHLALHRK-RHML   36 (37)
T ss_dssp             SSTTCCSSSBCCTTTCCCBSSHHHHHHHHG-GGTC
T ss_pred             CCccCCccCeEeCCCCCEecCHHHHHHHHh-cCcC
Confidence            466889999999999999999999999998 7763

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=7.3e-07  Score=60.61  Aligned_cols=26  Identities=19%  Similarity=0.607  Sum_probs=24.2

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      |||+|.+|||+|.+.++|.+|++ +|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~Hqr-iHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQR-IHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHH-HHH
T ss_pred             CCccCCCCcCeeccCcccccCcc-CCC
Confidence            79999999999999999999999 663

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.03  E-value=1.2e-06  Score=61.06  Aligned_cols=28  Identities=21%  Similarity=0.487  Sum_probs=26.0

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhccc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQRT  374 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r~  374 (790)
                      |||+|++|+|.|.+.++|++|++ +|+++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r-~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYR-SHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHH-TTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccC-cccCC
Confidence            69999999999999999999999 88764

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.2e-06  Score=63.80  Aligned_cols=32  Identities=25%  Similarity=0.460  Sum_probs=28.7

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      .|.+||||+|++|++.|.++++|++|++..|.
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            46789999999999999999999999875665

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.4e-06  Score=63.40  Aligned_cols=32  Identities=19%  Similarity=0.346  Sum_probs=28.6

Q ss_pred             cccCCcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          341 EVQVRDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       341 ~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      .|.+||||+|.+||++|.++++|.+|++ .|..
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r-~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFK-RYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHH-HTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCc-ccCC
Confidence            4678999999999999999999999998 6653

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1.5e-06  Score=60.42  Aligned_cols=28  Identities=29%  Similarity=0.575  Sum_probs=25.9

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhccc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQRT  374 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r~  374 (790)
                      |||.|.+|+|+|.++++|.+|++ +|+++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r-~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIK-THQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHH-GGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcC-ccCCc
Confidence            69999999999999999999999 88764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=1e-06  Score=62.20  Aligned_cols=28  Identities=25%  Similarity=0.542  Sum_probs=25.9

Q ss_pred             cccCC--cCccccCCchhhhhhccccccCc
Q 003869          394 KFECQ--FCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       394 PYkC~--~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      ||.|+  .|+|+|.+.++|++|+|+|+||.
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            89996  59999999999999999999874

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=1.9e-06  Score=63.83  Aligned_cols=33  Identities=27%  Similarity=0.523  Sum_probs=29.0

Q ss_pred             CcccCCcCccccCCchhhhhhcc-ccccCcccCc
Q 003869          393 GKFECQFCHKVFHERRRYNGHVG-IHVRNYVRGI  425 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~R-tHtgE~~~~~  425 (790)
                      +||+|.+|||+|.+.++|++|++ +|+++..-..
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCC
Confidence            49999999999999999999986 8999876543

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=3e-06  Score=55.81  Aligned_cols=26  Identities=23%  Similarity=0.636  Sum_probs=24.8

Q ss_pred             cccCCcCccccCCchhhhhhcccccc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      |++|..|+|.|+++..|+.|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            78999999999999999999999986

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.76  E-value=2e-06  Score=59.84  Aligned_cols=27  Identities=22%  Similarity=0.620  Sum_probs=25.3

Q ss_pred             CcccCCc--CccccCCchhhhhhcccccc
Q 003869          393 GKFECQF--CHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       393 GPYkC~~--CGKsFs~ks~L~rH~RtHtg  419 (790)
                      +||+|.+  |+|+|.+.++|++|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3899988  99999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=3.8e-06  Score=57.98  Aligned_cols=25  Identities=28%  Similarity=0.724  Sum_probs=24.1

Q ss_pred             cccCCc--CccccCCchhhhhhccccc
Q 003869          394 KFECQF--CHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       394 PYkC~~--CGKsFs~ks~L~rH~RtHt  418 (790)
                      ||.|+.  |||+|.+.++|++|+|+|+
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            899998  9999999999999999996

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.66  E-value=7.7e-06  Score=58.07  Aligned_cols=28  Identities=21%  Similarity=0.483  Sum_probs=25.9

Q ss_pred             CcccCCc--CccccCCchhhhhhccccccC
Q 003869          393 GKFECQF--CHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       393 GPYkC~~--CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      +||.|.+  |+|+|++.++|++|+++|+..
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            4999998  999999999999999999853

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=1.1e-05  Score=56.40  Aligned_cols=28  Identities=18%  Similarity=0.407  Sum_probs=25.7

Q ss_pred             cccccCC--CCcccCChhHHHHHHHhhhccc
Q 003869          346 DLFECHK--CEMTFDEKDTYLQHLLSFHQRT  374 (790)
Q Consensus       346 KPyeC~~--CgKtF~~kSsLkrH~l~~H~r~  374 (790)
                      |||.|++  |+|+|.++++|++|++ +|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r-~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLR-SHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHH-HTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcC-cCcCC
Confidence            6999999  9999999999999999 88763

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1.1e-05  Score=56.49  Aligned_cols=28  Identities=21%  Similarity=0.412  Sum_probs=25.6

Q ss_pred             cccccCC--CCcccCChhHHHHHHHhhhccc
Q 003869          346 DLFECHK--CEMTFDEKDTYLQHLLSFHQRT  374 (790)
Q Consensus       346 KPyeC~~--CgKtF~~kSsLkrH~l~~H~r~  374 (790)
                      |||.|++  |+|+|.+.++|++|++ +|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r-~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVR-IHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHH-HHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCcccc-ccCCC
Confidence            6999988  9999999999999999 88763

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.48  E-value=2.9e-05  Score=55.06  Aligned_cols=28  Identities=21%  Similarity=0.553  Sum_probs=25.6

Q ss_pred             CcccccCC--CCcccCChhHHHHHHHhhhcc
Q 003869          345 RDLFECHK--CEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       345 EKPyeC~~--CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      ||||.|.+  |+|.|.+.++|++|++ +|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r-~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKK-SHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHG-GGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhh-hccC
Confidence            68999998  9999999999999998 7764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.36  E-value=2.8e-05  Score=59.61  Aligned_cols=33  Identities=24%  Similarity=0.407  Sum_probs=29.2

Q ss_pred             cccCCcccccCC--CCcccCChhHHHHHHHhhhccc
Q 003869          341 EVQVRDLFECHK--CEMTFDEKDTYLQHLLSFHQRT  374 (790)
Q Consensus       341 ~~q~EKPyeC~~--CgKtF~~kSsLkrH~l~~H~r~  374 (790)
                      .+.++|||+|.+  |+|.|..+++|.+|++ +|+++
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r-~Htge   46 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQ-THLED   46 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHH-HHTTT
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcc-cccCC
Confidence            366789999987  9999999999999999 88763

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=4.6e-05  Score=53.56  Aligned_cols=28  Identities=25%  Similarity=0.425  Sum_probs=24.8

Q ss_pred             cccccCC--CCcccCChhHHHHHHHhhhccc
Q 003869          346 DLFECHK--CEMTFDEKDTYLQHLLSFHQRT  374 (790)
Q Consensus       346 KPyeC~~--CgKtF~~kSsLkrH~l~~H~r~  374 (790)
                      |||.|+.  |+|.|.+.++|++|++ +|+++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r-~Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKR-THTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHT-TTSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcC-ccccc
Confidence            6999964  9999999999999998 78764

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.29  E-value=3.8e-05  Score=53.29  Aligned_cols=27  Identities=19%  Similarity=0.544  Sum_probs=24.5

Q ss_pred             cccccCC--CCcccCChhHHHHHHHhhhcc
Q 003869          346 DLFECHK--CEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       346 KPyeC~~--CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      |||.|++  |+|.|.+.++|++|++ +|++
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r-~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIR-IHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTH-HHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcC-ccCC
Confidence            6999988  9999999999999988 7763

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=2.6e-05  Score=56.61  Aligned_cols=30  Identities=23%  Similarity=0.453  Sum_probs=27.0

Q ss_pred             ccCCc--CccccCCchhhhhhccccccCcccC
Q 003869          395 FECQF--CHKVFHERRRYNGHVGIHVRNYVRG  424 (790)
Q Consensus       395 YkC~~--CGKsFs~ks~L~rH~RtHtgE~~~~  424 (790)
                      |.|+.  |+|+|.++.+|++|+++|+++..-.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~   33 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYI   33 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEe
Confidence            78987  9999999999999999999987644

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=5.4e-05  Score=52.09  Aligned_cols=26  Identities=23%  Similarity=0.543  Sum_probs=23.8

Q ss_pred             cccccCC--CCcccCChhHHHHHHHhhhc
Q 003869          346 DLFECHK--CEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       346 KPyeC~~--CgKtF~~kSsLkrH~l~~H~  372 (790)
                      |||.|++  |+|+|.+.++|++|++ .|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r-~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHIL-THA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHH-HHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHh-hcc
Confidence            6999998  9999999999999998 664

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=7.3e-05  Score=54.22  Aligned_cols=24  Identities=29%  Similarity=0.733  Sum_probs=20.9

Q ss_pred             cccCC--CCcccCChhHHHHHHHhhhc
Q 003869          348 FECHK--CEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       348 yeC~~--CgKtF~~kSsLkrH~l~~H~  372 (790)
                      |.|+.  |+|.|..+++|++|++ +|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r-~Ht   27 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMK-LHS   27 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHH-HHH
T ss_pred             eECCCCCCCCeeCChhHhccccC-eeC
Confidence            78987  9999999999999988 444

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.08  E-value=7.1e-05  Score=50.60  Aligned_cols=26  Identities=27%  Similarity=0.654  Sum_probs=24.7

Q ss_pred             CcccCCcCccccCCchhhhhhccccc
Q 003869          393 GKFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      +||.|.+||+.|.+....++|.++|.
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCcccchhhhhhhcchhhhhhhhhcc
Confidence            49999999999999999999999995

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00015  Score=55.91  Aligned_cols=31  Identities=19%  Similarity=0.354  Sum_probs=27.2

Q ss_pred             ccccCCcccccCCCCcccCChhHHHHHHHhhh
Q 003869          340 AEVQVRDLFECHKCEMTFDEKDTYLQHLLSFH  371 (790)
Q Consensus       340 ~~~q~EKPyeC~~CgKtF~~kSsLkrH~l~~H  371 (790)
                      ..+.+++||.|.+||++|...++|.+|++ +|
T Consensus        23 ~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r-~H   53 (53)
T d2csha1          23 SMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IH   53 (53)
T ss_dssp             HHHSCCCSEECTTTSCEESSSHHHHHHHT-TT
T ss_pred             hccccccCCcCCCcCCEecCHHHHHHHHh-cC
Confidence            34667899999999999999999999987 55

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.00027  Score=46.45  Aligned_cols=25  Identities=28%  Similarity=0.579  Sum_probs=22.7

Q ss_pred             ccccCCCCcccCChhHHHHHHHhhhc
Q 003869          347 LFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      |++|+.|+|.|.++..|+.|++ .|+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr-~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMR-CHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGG-GCC
T ss_pred             CCccchhhhHhcchhHHHHHhh-ccC
Confidence            6899999999999999999988 665

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.77  E-value=0.00034  Score=47.22  Aligned_cols=27  Identities=26%  Similarity=0.518  Sum_probs=24.8

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      ||||.|.+||+.|......++|.+ +|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~k-iH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTK-IHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHG-GGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhh-hcc
Confidence            689999999999999999999988 675

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.75  E-value=0.00022  Score=47.71  Aligned_cols=26  Identities=27%  Similarity=0.496  Sum_probs=24.4

Q ss_pred             ccCCcCccccCCchhhhhhccccccC
Q 003869          395 FECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       395 YkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      +.|.+|||+|...+.|++|+-+|+||
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            57999999999999999999999986

>d1v65a_ a.212.1.1 (A:) hypotheical protein 2610044O15Rik {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: KRAB domain (Kruppel-associated box)
superfamily: KRAB domain (Kruppel-associated box)
family: KRAB domain (Kruppel-associated box)
domain: hypotheical protein 2610044O15Rik
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.43  E-value=0.00019  Score=58.33  Aligned_cols=32  Identities=13%  Similarity=0.053  Sum_probs=30.0

Q ss_pred             ceeecCCCeEEeeeccC-CCCCchHHHHhhhhc
Q 003869          168 LVMVNKNGSVVDIVDLG-SLEDPYGEELRRRTE  199 (790)
Q Consensus       168 ~~~~~~~gv~vd~~~~~-~~~dp~~~el~r~~~  199 (790)
                      ...|+|.+|+|+|++++ .++||.|++|||++|
T Consensus         5 ~~~VtFeDVaV~Fs~EEW~~Ld~~Qk~LyrdVm   37 (64)
T d1v65a_           5 SSGVTYDDVHMNFTEEEWDLLDSSQKRLYEEVM   37 (64)
T ss_dssp             CSCCCCCCCTTCCCHHHHHTSCHHHHHHHHHHH
T ss_pred             CCCEEEeEEEEEcCHHHHhCcCHHHHHHHHHhH
Confidence            45689999999999999 899999999999999

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.00095  Score=44.58  Aligned_cols=27  Identities=26%  Similarity=0.529  Sum_probs=24.0

Q ss_pred             ccccCCCCcccCChhHHHHHHHhhhccc
Q 003869          347 LFECHKCEMTFDEKDTYLQHLLSFHQRT  374 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l~~H~r~  374 (790)
                      .+.|.+|||.|...+.|++|++ +|+++
T Consensus         2 ~hvc~ecgkaf~essklkrh~l-vhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQL-VHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGG-GTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhh-cccCC
Confidence            4689999999999999999999 88753

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.0012  Score=45.13  Aligned_cols=28  Identities=25%  Similarity=0.551  Sum_probs=25.6

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      ||||.|++|+..|..+..+..|.+ .|.+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvr-shdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVR-SHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHH-HHSC
T ss_pred             CCCcccchHHHHhhccccceEeee-cccC
Confidence            589999999999999999999988 7765

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.06  E-value=0.00059  Score=45.94  Aligned_cols=25  Identities=32%  Similarity=0.693  Sum_probs=23.3

Q ss_pred             cccCCc--CccccCCchhhhhhccccc
Q 003869          394 KFECQF--CHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       394 PYkC~~--CGKsFs~ks~L~rH~RtHt  418 (790)
                      ||+|++  |+|+|+..+.|++|.++|.
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhccC
Confidence            899987  9999999999999999883

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.001  Score=44.59  Aligned_cols=28  Identities=21%  Similarity=0.470  Sum_probs=26.0

Q ss_pred             CcccCCcCccccCCchhhhhhccccccC
Q 003869          393 GKFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      +||+|+.|...-...+.|..|+|.|+|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CcceeeecccccCCchheEEeeecccCc
Confidence            4999999999999999999999999974

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=95.99  E-value=0.0013  Score=42.85  Aligned_cols=24  Identities=25%  Similarity=0.746  Sum_probs=23.0

Q ss_pred             ccCCcCccccCCchhhhhhccccc
Q 003869          395 FECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       395 YkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      |+|..|.++|..++.|.+|+|.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            799999999999999999999995

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.00062  Score=46.66  Aligned_cols=28  Identities=25%  Similarity=0.506  Sum_probs=25.8

Q ss_pred             CcccCCcCccccCCchhhhhhccccccC
Q 003869          393 GKFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      +||.|++|+.+|.++..+.-|.|.|.|.
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCcccchHHHHhhccccceEeeecccCc
Confidence            4999999999999999999999999753

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.88  E-value=0.001  Score=45.47  Aligned_cols=26  Identities=19%  Similarity=0.489  Sum_probs=23.9

Q ss_pred             cccCCc--CccccCCchhhhhhcccccc
Q 003869          394 KFECQF--CHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       394 PYkC~~--CGKsFs~ks~L~rH~RtHtg  419 (790)
                      ||.|++  |+|+|...+.|++|+++++|
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            899998  99999999999999998764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.76  E-value=0.0022  Score=43.78  Aligned_cols=26  Identities=15%  Similarity=0.552  Sum_probs=23.3

Q ss_pred             cccccCC--CCcccCChhHHHHHHHhhh
Q 003869          346 DLFECHK--CEMTFDEKDTYLQHLLSFH  371 (790)
Q Consensus       346 KPyeC~~--CgKtF~~kSsLkrH~l~~H  371 (790)
                      |||.|..  |+|+|...++|+.|++..|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            6999988  9999999999999998544

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.0019  Score=43.52  Aligned_cols=27  Identities=19%  Similarity=0.351  Sum_probs=25.4

Q ss_pred             cccCCcCccccCCchhhhhhccccccC
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      .|.|+.||.....++-|++|+|+|+++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCC
Confidence            489999999999999999999999976

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.48  E-value=0.0024  Score=43.93  Aligned_cols=27  Identities=30%  Similarity=0.671  Sum_probs=23.7

Q ss_pred             cccCCcCccccCCchhhhhhc-cccccC
Q 003869          394 KFECQFCHKVFHERRRYNGHV-GIHVRN  420 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~-RtHtgE  420 (790)
                      ||.|.+|++.|+++.-|.+|+ +.|.|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            899999999999999999995 567654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.44  E-value=0.0019  Score=42.52  Aligned_cols=26  Identities=31%  Similarity=0.489  Sum_probs=24.4

Q ss_pred             cCCcCccccCCchhhhhhccccccCc
Q 003869          396 ECQFCHKVFHERRRYNGHVGIHVRNY  421 (790)
Q Consensus       396 kC~~CGKsFs~ks~L~rH~RtHtgE~  421 (790)
                      +|+.|.|+|..+..|+.|-|.|+||.
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999874

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.88  E-value=0.0065  Score=40.69  Aligned_cols=28  Identities=21%  Similarity=0.401  Sum_probs=25.0

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      |+||+|..|...-...+.|..|++ .|++
T Consensus         1 erpfkcqlcsy~srnssqltvhlr-~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLR-SHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHT-TCCS
T ss_pred             CCcceeeecccccCCchheEEeee-cccC
Confidence            589999999999999999999988 6664

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.87  E-value=0.0039  Score=43.55  Aligned_cols=29  Identities=24%  Similarity=0.474  Sum_probs=26.3

Q ss_pred             cccCCcCccccCCchhhhhhccccccCcc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      ...|..|||.|..-.+|++|.-.|++|.+
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekp   33 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKP   33 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCC
Confidence            45799999999999999999999998864

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.74  E-value=0.01  Score=40.06  Aligned_cols=28  Identities=18%  Similarity=0.542  Sum_probs=25.2

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      |||+|.+|.......++|+.|..+.|..
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            6999999999999999999999877753

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.70  E-value=0.004  Score=41.43  Aligned_cols=26  Identities=23%  Similarity=0.549  Sum_probs=24.6

Q ss_pred             CcccCCcCccccCCchhhhhhccccc
Q 003869          393 GKFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      +||+|..|...-...+.|++|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            49999999999999999999999996

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.63  E-value=0.0047  Score=45.28  Aligned_cols=25  Identities=32%  Similarity=0.643  Sum_probs=22.1

Q ss_pred             CcccCCcCccccCCchhhhhhcccc
Q 003869          393 GKFECQFCHKVFHERRRYNGHVGIH  417 (790)
Q Consensus       393 GPYkC~~CGKsFs~ks~L~rH~RtH  417 (790)
                      +||+|..|+|.|.++..+.+|....
T Consensus         4 KPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           4 KPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CceeccchhhhhhhHHHHHHhhhhh
Confidence            4999999999999999999996543

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.60  E-value=0.0051  Score=44.50  Aligned_cols=29  Identities=28%  Similarity=0.828  Sum_probs=26.2

Q ss_pred             cccCCcCccccCCchhhhhhccccccCcc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRNYV  422 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE~~  422 (790)
                      .|+|.+|+|.|.....|-.|++.|..+..
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             ccCCCCCCCccCCcccccchHhhhcchHH
Confidence            69999999999999999999999976543

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.05  E-value=0.014  Score=38.79  Aligned_cols=26  Identities=19%  Similarity=0.603  Sum_probs=24.0

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      |||+|..|...-...++|+.|++ +|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~r-ihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLR-IHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH-HSC
T ss_pred             CCcccccccchhcchhhHhhhhh-ccc
Confidence            79999999999999999999998 664

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.82  E-value=0.0095  Score=40.96  Aligned_cols=26  Identities=23%  Similarity=0.537  Sum_probs=24.0

Q ss_pred             cccCCc--CccccCCchhhhhhc-ccccc
Q 003869          394 KFECQF--CHKVFHERRRYNGHV-GIHVR  419 (790)
Q Consensus       394 PYkC~~--CGKsFs~ks~L~rH~-RtHtg  419 (790)
                      ||.|.+  |.|+|+..+.-.+|+ |+|..
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CccccCCChhhhhcchhhhhhhccccccC
Confidence            899998  999999999999997 99974

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=93.66  E-value=0.018  Score=37.32  Aligned_cols=24  Identities=33%  Similarity=0.700  Sum_probs=21.9

Q ss_pred             cccCCCCcccCChhHHHHHHHhhhc
Q 003869          348 FECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       348 yeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      |+|..|.++|..++.|.+|++ +|.
T Consensus         1 ykcglcersfveksalsrhqr-vhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQR-VHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGG-GTC
T ss_pred             CcccchHHHHHHHHHHHHHHH-hhc
Confidence            789999999999999999988 664

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.65  E-value=0.013  Score=40.88  Aligned_cols=28  Identities=21%  Similarity=0.368  Sum_probs=24.2

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhccc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQRT  374 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r~  374 (790)
                      |...|..|||.|.+..+|.+|.+ .|.++
T Consensus         4 k~~~ce~cgk~frdvyhlnrhkl-shs~e   31 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKL-SHSGE   31 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGG-GSCSC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhc-ccCCC
Confidence            56789999999999999999988 66643

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.52  E-value=0.01  Score=39.87  Aligned_cols=24  Identities=17%  Similarity=0.613  Sum_probs=22.4

Q ss_pred             cccCCcCccccCCchhhhhhcccc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIH  417 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtH  417 (790)
                      ||.|..|.-+|..+.+|..||+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            899999999999999999999754

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.26  E-value=0.023  Score=38.09  Aligned_cols=25  Identities=24%  Similarity=0.494  Sum_probs=22.5

Q ss_pred             cccccCC--CCcccCChhHHHHHHHhhh
Q 003869          346 DLFECHK--CEMTFDEKDTYLQHLLSFH  371 (790)
Q Consensus       346 KPyeC~~--CgKtF~~kSsLkrH~l~~H  371 (790)
                      .||+|+.  |+|.|...+.|++|.+ +|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhek-vh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEK-VH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHH-HH
T ss_pred             CCccCCccCccccccCHHHHhhhhh-cc
Confidence            5899987  9999999999999987 55

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.94  E-value=0.024  Score=37.50  Aligned_cols=22  Identities=36%  Similarity=0.694  Sum_probs=20.6

Q ss_pred             ccccCCCCcccCChhHHHHHHH
Q 003869          347 LFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ||+|..|||.|..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7999999999999999999965

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.84  E-value=0.027  Score=41.23  Aligned_cols=25  Identities=24%  Similarity=0.554  Sum_probs=22.5

Q ss_pred             CCcccccCCCCcccCChhHHHHHHH
Q 003869          344 VRDLFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       344 ~EKPyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      +-|||+|..|+|.|-...++.+|.-
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            3589999999999999999999963

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=92.65  E-value=0.026  Score=38.78  Aligned_cols=27  Identities=22%  Similarity=0.604  Sum_probs=24.1

Q ss_pred             ccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          347 LFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      ||.|.+|++.|..+.-|.+|+...|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            799999999999999999998766654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.95  E-value=0.05  Score=35.68  Aligned_cols=25  Identities=28%  Similarity=0.337  Sum_probs=22.3

Q ss_pred             ccCCCCcccCChhHHHHHHHhhhccc
Q 003869          349 ECHKCEMTFDEKDTYLQHLLSFHQRT  374 (790)
Q Consensus       349 eC~~CgKtF~~kSsLkrH~l~~H~r~  374 (790)
                      +|+.|.|+|..+..|+.|-+ .|+++
T Consensus         2 qcp~c~k~f~skyylkvhnr-~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNR-KHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHH-HHSSC
T ss_pred             cCcchHHHHHHhHhhhhccc-cccCC
Confidence            69999999999999999988 77753

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.74  E-value=0.048  Score=36.69  Aligned_cols=27  Identities=22%  Similarity=0.594  Sum_probs=24.4

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      +||+|.+|.---.+.++|..|++..|.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            689999999999999999999987774

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.58  E-value=0.049  Score=39.25  Aligned_cols=28  Identities=21%  Similarity=0.503  Sum_probs=25.0

Q ss_pred             cccccCCCCcccCChhHHHHHHHhhhccc
Q 003869          346 DLFECHKCEMTFDEKDTYLQHLLSFHQRT  374 (790)
Q Consensus       346 KPyeC~~CgKtF~~kSsLkrH~l~~H~r~  374 (790)
                      +.|+|.+|++.|.....|--|+. .|.+.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~-~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMN-VHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHH-TTCCS
T ss_pred             CccCCCCCCCccCCcccccchHh-hhcch
Confidence            67999999999999999999988 77643

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.26  E-value=0.024  Score=38.15  Aligned_cols=27  Identities=26%  Similarity=0.471  Sum_probs=24.6

Q ss_pred             cccCCc--CccccCCchhhhhhccccccC
Q 003869          394 KFECQF--CHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       394 PYkC~~--CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      ||.|..  |.|.|..-.+|.+|.-+|+||
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            788875  999999999999999999985

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.12  E-value=0.026  Score=37.85  Aligned_cols=27  Identities=26%  Similarity=0.576  Sum_probs=25.3

Q ss_pred             cccCCcCccccCCchhhhhhccccccC
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      -|.|..|...|.++-.|+-||-.|+|+
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            588999999999999999999999985

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.04  E-value=0.054  Score=36.40  Aligned_cols=27  Identities=30%  Similarity=0.577  Sum_probs=23.9

Q ss_pred             cccccCC--CCcccCChhHHHHHHHhhhcc
Q 003869          346 DLFECHK--CEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       346 KPyeC~~--CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      |||.|.+  |.|.|....+|.+|.+ .|++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~-thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSL-THTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHH-HHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhc-cccC
Confidence            6899987  9999999999999988 7765

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.02  E-value=0.056  Score=36.27  Aligned_cols=22  Identities=23%  Similarity=0.696  Sum_probs=21.2

Q ss_pred             ccccCCCCcccCChhHHHHHHH
Q 003869          347 LFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      ||.|..|.-.|..+.+|..||.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            7999999999999999999987

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.98  E-value=0.061  Score=34.77  Aligned_cols=25  Identities=24%  Similarity=0.717  Sum_probs=22.5

Q ss_pred             ccccCCCCcccCChhHHHHHHHhhh
Q 003869          347 LFECHKCEMTFDEKDTYLQHLLSFH  371 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l~~H  371 (790)
                      ||+|.-|...|-++..|..|+...|
T Consensus         2 pykcsscsqqfmqkkdlqshmiklh   26 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIKLH   26 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhcC
Confidence            7999999999999999999987444

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.59  E-value=0.044  Score=36.24  Aligned_cols=22  Identities=27%  Similarity=0.620  Sum_probs=20.4

Q ss_pred             cccCCcCccccCCchhhhhhcc
Q 003869          394 KFECQFCHKVFHERRRYNGHVG  415 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~R  415 (790)
                      ||+|..|||.|-++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7999999999999999999964

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.93  E-value=0.055  Score=36.48  Aligned_cols=25  Identities=16%  Similarity=0.501  Sum_probs=23.0

Q ss_pred             cccCCcCccccCCchhhhhhccccc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      ||+|+.|..+-...++|+.|+++.+
T Consensus         2 py~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             Cccccccccccccchhhhhhhhccc
Confidence            8999999999999999999998744

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.71  E-value=0.065  Score=36.74  Aligned_cols=27  Identities=19%  Similarity=0.456  Sum_probs=23.6

Q ss_pred             cccccCC--CCcccCChhHHHHHHHhhhc
Q 003869          346 DLFECHK--CEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       346 KPyeC~~--CgKtF~~kSsLkrH~l~~H~  372 (790)
                      |||.|.+  |.|.|...+.-..|+...|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            6999998  99999999999999854665

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.79  E-value=0.078  Score=34.29  Aligned_cols=22  Identities=18%  Similarity=0.646  Sum_probs=20.6

Q ss_pred             cccCCcCccccCCchhhhhhcc
Q 003869          394 KFECQFCHKVFHERRRYNGHVG  415 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~R  415 (790)
                      ||+|..|...|.++..|+.|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999973

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.47  E-value=0.076  Score=37.22  Aligned_cols=27  Identities=26%  Similarity=0.459  Sum_probs=23.8

Q ss_pred             cccCCcCccccCCchhhhhhccccccC
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVRN  420 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtgE  420 (790)
                      .|.|..|||+|.++..+.+|....+|-
T Consensus         4 afvcskcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCCC
Confidence            589999999999999999998777653

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.43  E-value=0.21  Score=33.43  Aligned_cols=26  Identities=15%  Similarity=0.444  Sum_probs=23.4

Q ss_pred             ccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          347 LFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      .|.|++||......+-|+.|.+ .|++
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIR-sHT~   26 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIR-THTD   26 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH-HTSS
T ss_pred             CccccccCcccCCHHHHHHHHH-HhcC
Confidence            3899999999999999999998 7765

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.35  E-value=0.24  Score=33.12  Aligned_cols=28  Identities=25%  Similarity=0.584  Sum_probs=24.9

Q ss_pred             CcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          345 RDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       345 EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      |..|.|..|...|...-.|+.||. .|++
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmv-shtg   29 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMV-SHTG   29 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHH-HHSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeee-cccC
Confidence            356999999999999999999998 7775

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.24  E-value=0.21  Score=32.35  Aligned_cols=24  Identities=29%  Similarity=0.595  Sum_probs=21.9

Q ss_pred             cccCCCCcccCChhHHHHHHHhhh
Q 003869          348 FECHKCEMTFDEKDTYLQHLLSFH  371 (790)
Q Consensus       348 yeC~~CgKtF~~kSsLkrH~l~~H  371 (790)
                      |.|+.|-|.|.++.++..|.+.+|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            789999999999999999987665

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.37  E-value=0.16  Score=33.67  Aligned_cols=26  Identities=19%  Similarity=0.285  Sum_probs=23.9

Q ss_pred             cccCCcCccccCCchhhhhhcccccc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      |-+|..|..+.+.+..|+.|.|+|..
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            66899999999999999999999964

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.75  E-value=0.29  Score=35.10  Aligned_cols=27  Identities=26%  Similarity=0.490  Sum_probs=23.5

Q ss_pred             CcccccCC--CCcccCChhHHHHHHHhhhc
Q 003869          345 RDLFECHK--CEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       345 EKPyeC~~--CgKtF~~kSsLkrH~l~~H~  372 (790)
                      +|||.|..  |+.+|....+|..|.. .|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~-KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKH-KHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHH-HHH
T ss_pred             CCceecCCCCccccccchHHHHHhhh-hhe
Confidence            69999954  9999999999999977 564

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.30  E-value=0.25  Score=34.53  Aligned_cols=22  Identities=36%  Similarity=0.696  Sum_probs=20.0

Q ss_pred             ccccCCCCcccCChhHHHHHHH
Q 003869          347 LFECHKCEMTFDEKDTYLQHLL  368 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l  368 (790)
                      .|.|..|||+|.+...+.+|.-
T Consensus         4 afvcskcgktftrrntm~rha~   25 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHAD   25 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHhh
Confidence            5899999999999999999964

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.35  E-value=0.16  Score=34.03  Aligned_cols=26  Identities=15%  Similarity=0.391  Sum_probs=22.8

Q ss_pred             cccCCcCccccCCchhhhhhcccccc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHVR  419 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHtg  419 (790)
                      ||+|..|.---.++++|..|++.-++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CcccceecccccCcchHHHHHHHHcc
Confidence            89999999988999999999876443

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.28  E-value=0.16  Score=38.24  Aligned_cols=25  Identities=32%  Similarity=0.628  Sum_probs=23.4

Q ss_pred             cccCCcCccccCCchhhhhhccccc
Q 003869          394 KFECQFCHKVFHERRRYNGHVGIHV  418 (790)
Q Consensus       394 PYkC~~CGKsFs~ks~L~rH~RtHt  418 (790)
                      -|.|..|||.|.....|+.|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            6899999999999999999998885

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=80.65  E-value=0.46  Score=33.25  Aligned_cols=30  Identities=17%  Similarity=0.559  Sum_probs=26.1

Q ss_pred             CCcccccCCCCcccCChhHHHHHHHhhhcc
Q 003869          344 VRDLFECHKCEMTFDEKDTYLQHLLSFHQR  373 (790)
Q Consensus       344 ~EKPyeC~~CgKtF~~kSsLkrH~l~~H~r  373 (790)
                      ++..|.|..|.++|...+++-+|....|.+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            346799999999999999999999877764

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.31  E-value=0.51  Score=31.15  Aligned_cols=26  Identities=27%  Similarity=0.517  Sum_probs=22.9

Q ss_pred             ccccCCCCcccCChhHHHHHHHhhhc
Q 003869          347 LFECHKCEMTFDEKDTYLQHLLSFHQ  372 (790)
Q Consensus       347 PyeC~~CgKtF~~kSsLkrH~l~~H~  372 (790)
                      .|+|+.|+-...+++.|..|++..|.
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhheeehhhhhHHhhhccc
Confidence            48999999999999999999985553