Citrus Sinensis ID: 003885

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------79

MDHGSRGDREENDIEVEGGGHNGSFESERRKFVERMGSGTSEDHNLREPLLLKCRTNTTSQIAIVGANICPIESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSINLGLAILAAILCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFIEFCRSGRCGLFGQGGLIMFDVNSAKNSYSSADLLAVIFLGVIGGIFGSFYNYLVDKVLRTYSIINERGPIFKVLLVAAVSLLTSCCSYGLPWLSHCIPCPSYLEADRCPTVGRSGNYKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSGTSKEFHLSTLLVFFVAIYCLGIITYGIAVPSGLFIPVILAGASYGRLVGNLLGALSDLDTGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADSFNQGVYDQIVKLKGLPYLEAHAEPYMKNLVASDVVSGPLITFSGVEKVGNIMHALRLTRHNGFPVIDEPPLTPAPELCGLVLRSHLLVLLKGKKFTKQKTMTGSDIMRRFKAHDFAKAGSGKGVKLEDLDIKEEEMEMFVDLHPITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHIVNRHK

cccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHEEEEcccccccccccHHHHccccccccccccccHHHHHHcccEEEcccccccccccHHHHHHHHHHHHHccccccccccccHHcccccccccccHHHHccccccccccccccccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccEEEEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccccccccccccEEEEcccccHHHHHHHHHccccccEEEEEccccccccEEEEEEEHHHHHHHHHccccccccccccccHHHcccccccccccccccccccccccHHHHHccccccccccccccccccccccHHHHHHHHHHccccEEEEEEcccccccEEEEEEccccHHHHHHccccccccccc

ccccccccccccccccccccccccccccccccHHccccccccccccccccEEEEcccccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcccccHHHHHHHcccccccHccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccccHHHEEEcccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccHHHcccccccHHHHHccccccccccccccccccccccccHHHHHccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccHHcEEEHHHHccccEEEEccccEHHHHHHHHHcccccccEEEcccccccccEEHHHHHHHHHHHHHHHHHccccccccccHHHHHcccccccccccccccccccccccHHHccccEcccccccccccEEcccccHHHHHHHHHHHcccEEEEEccccccccEEEEEEHHHHHHHHHHHHcHHHccccc

mdhgsrgdreendieveggghngsfeSERRKFVERmgsgtsedhnlreplllkcrtnttsQIAIVganicpiesldyEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNlmlndrhfmGFVANTSINLGLAILAAILCAYIapaaagsgipeVKAYLngidahsilapsTLFVKIFGSIFGVAAgfvvgkegpmvhtGACIANllgqggskkyhLTWRWLRYFkndrdrrdlitcgaaagvagafrapvGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFIEFCrsgrcglfgqgglimfdvnsaknsyssaDLLAVIFLGVIGGIFGSFYNYLVDKVLRTYSIINERGPIFKVLLVAAVSLLTSCcsyglpwlshcipcpsyleadrcptvgrsgnyknfqcpaghyndlASLFLNTNDDAIRNLfssgtskefhLSTLLVFFVAIYCLGIITYgiavpsglFIPVILAGASYGRLVGNLLGALSDLDTGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADSFNQGVYDQIVKlkglpyleahaepyMKNLVasdvvsgplitfsgvekVGNIMHALRLtrhngfpvideppltpapelcgLVLRSHLLVLLkgkkftkqktmtgsdIMRRFKAhdfakagsgkgvkledldiKEEEMEMFvdlhpitntspytVVETMSLAKAAVLFRQLALRHLcvvpktpgrppivgiltrhdfmpehvlglyphivnrhk

mdhgsrgdreendieveggghngsfeserRKFVERMgsgtsedhnlrepLLLKCRTNTTSQIAIVGANICPIESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSINLGLAILAAILCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLgqggskkyhLTWRWLRYFKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFIEFCRSGRCGLFGQGGLIMFDVNSAKNSYSSADLLAVIFLGVIGGIFGSFYNYLVDKVLRTYSIINERGPIFKVLLVAAVSLLTSCCSYGLPWLSHCIPCPSYLEADRCPTVGRSGNYKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSGTSKEFHLSTLLVFFVAIYCLGIITYGIAVPSGLFIPVILAGASYGRLVGNLLGALSDLDTGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADSFNQGVYDQIVKLKGLPYLEAHAEPYMKNLVASDVVSGPLITFSGVEKVGNIMHALRLTRHNGFPVIDEPPLTPAPELCGLVLRSHLLVllkgkkftkqktmtgsdiMRRFKahdfakagsgkgvklEDLDIKEEEMEMFVDLHPITNTSPYTVVETMSLAKAAVLFRQLALRHlcvvpktpgrPPIVGILTRHDFMPEHVLglyphivnrhk

MDHGSRGDREENDIEVEGGGHNGSFESERRKFVERMGSGTSEDHNLREPLLLKCRTNTTSQIAIVGANICPIESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSinlglailaailcayiapaaaGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDRRDLITCgaaagvagafrapvggvLFALEEAASWWRSALLWRtffttavvavvLRGFIEFCRSGRCGLFGQGGLIMFDVNSAKNSYSSADllaviflgviggifgSFYNYLVDKVLRTYSIINERGPIFKvllvaavsllTSCCSYGLPWLSHCIPCPSYLEADRCPTVGRSGNYKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSGTSKEFHLSTLLVFFVAIYCLGIITYGIAVPSGLFIPVILAGASYGRLVGNLLGALSDLDTglfallgaasflggTMRMTVSlcvilleltnnllmlplvmlvlliSKTVADSFNQGVYDQIVKLKGLPYLEAHAEPYMKNLVASDVVSGPLITFSGVEKVGNIMHALRLTRHNGFPVIDEPPLTPAPElcglvlrshllvllKGKKFTKQKTMTGSDIMRRFKAHDFAKAGSGKGVKLEDLDIKEEEMEMFVDLHPITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHIVNRHK

************************************************PLLLKCRTNTTSQIAIVGANICPIESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSINLGLAILAAILCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFIEFCRSGRCGLFGQGGLIMFDVNSAKNSYSSADLLAVIFLGVIGGIFGSFYNYLVDKVLRTYSIINERGPIFKVLLVAAVSLLTSCCSYGLPWLSHCIPCPSYLEADRCPTVGRSGNYKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSGTSKEFHLSTLLVFFVAIYCLGIITYGIAVPSGLFIPVILAGASYGRLVGNLLGALSDLDTGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADSFNQGVYDQIVKLKGLPYLEAHAEPYMKNLVASDVVSGPLITFSGVEKVGNIMHALRLTRHNGFPVIDEPPLTPAPELCGLVLRSHLLVLLKGKKFTKQKTMTGSDIMRRFKAHDFAK*****GVKLEDLDIKEEEMEMFVDLHPITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHIV****

*********************************************************************CPIESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSINLGLAILAAILCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFIEFCRSGRCGLFGQGGLIMFDVNSAKNSYSSADLLAVIFLGVIGGIFGSFYNYLVDKVLRTYSIINERGPIFKVLLVAAVSLLTSCCSYGLPWLSHCIPCPSYLEADRCPTVGRSGNYKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSGTSKEFHLSTLLVFFVAIYCLGIITYGIAVPSGLFIPVILAGASYGRLVGNLLGALSDLDTGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADSFNQGVYDQIVKLKGLPYLEAHAEPYMKNLVASDVVSGPLITFSGVEKVGNIMHALRLTRHNGFPVIDEPPLTPAPELCGLVLRSHLLVLLKGKKFTKQKTMTGSDIMRRFKAHDFAKA***************EEMEMFVDLHPITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRPPIVGILTRHDFMPEHV************

***********NDIEVEGGGHNGSFESERRKFVERMGSGTSEDHNLREPLLLKCRTNTTSQIAIVGANICPIESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSINLGLAILAAILCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFIEFCRSGRCGLFGQGGLIMFDVNSAKNSYSSADLLAVIFLGVIGGIFGSFYNYLVDKVLRTYSIINERGPIFKVLLVAAVSLLTSCCSYGLPWLSHCIPCPSYLEADRCPTVGRSGNYKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSGTSKEFHLSTLLVFFVAIYCLGIITYGIAVPSGLFIPVILAGASYGRLVGNLLGALSDLDTGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADSFNQGVYDQIVKLKGLPYLEAHAEPYMKNLVASDVVSGPLITFSGVEKVGNIMHALRLTRHNGFPVIDEPPLTPAPELCGLVLRSHLLVLLKGKKFTKQKTMTGSDIMRRFKAHDFAKAGSGKGVKLEDLDIKEEEMEMFVDLHPITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHIVNRHK

********************************************NLREPLLLKCRTNTTSQIAIVGANICPIESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSINLGLAILAAILCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFIEFCRSGRCGLFGQGGLIMFDVNSAKNSYSSADLLAVIFLGVIGGIFGSFYNYLVDKVLRTYSIINERGPIFKVLLVAAVSLLTSCCSYGLPWLSHCIPCPSYLEADRCPTVGRSGNYKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSGTSKEFHLSTLLVFFVAIYCLGIITYGIAVPSGLFIPVILAGASYGRLVGNLLGALSDLDTGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADSFNQGVYDQIVKLKGLPYLEAHAEPYMKNLVASDVVSGPLITFSGVEKVGNIMHALRLTRHNGFPVIDEPPLTPAPELCGLVLRSHLLVLLKGKKFTK****TGSDIMRRFKAHDFAKAGSGKGVKLEDLDIKEEEMEMFVDLHPITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHIV****

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		789	2.2.26 [Sep-21-2011]
Q96282		779	Chloride channel protein	yes	no	0.979	0.992	0.773	0.0
P60300		765	Putative chloride channel	no	no	0.950	0.980	0.627	0.0
P92941		775	Chloride channel protein	no	no	0.965	0.983	0.540	0.0
P92942		780	Chloride channel protein	no	no	0.956	0.967	0.549	0.0
P92943		792	Chloride channel protein	no	no	0.882	0.878	0.495	1e-169
O70496		803	H(+)/Cl(-) exchange trans	yes	no	0.863	0.848	0.365	1e-107
P51799		803	H(+)/Cl(-) exchange trans	yes	no	0.863	0.848	0.365	1e-107
P51798		805	H(+)/Cl(-) exchange trans	yes	no	0.863	0.845	0.365	1e-102
Q4PKH3		809	H(+)/Cl(-) exchange trans	yes	no	0.863	0.841	0.358	2e-98
Q54AX6		863	Chloride channel protein	yes	no	0.875	0.800	0.321	6e-95

>sp\|Q96282\|CLCC_ARATH Chloride channel protein CLC-c OS=Arabidopsis thaliana GN=CLC-C PE=1 SV=1	Back alignment and function desciption

 Score = 1192 bits (3083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/786 (77%), Positives = 672/786 (85%), Gaps = 13/786 (1%)

Query: 1   MDHGSRGDREENDIEVEGGGHNGSFESERRKFVERMGSGTSEDHNL--REPLLLKCRTNT 58
           MD    GD   +DIEVEGG  +G          ER  SG  +D ++  R+PLL + R NT
Sbjct: 1   MDDRHEGD--HHDIEVEGGALHG---------FERKISGILDDGSVGFRQPLLARNRKNT 49

Query: 59  TSQIAIVGANICPIESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLA 118
           TSQIAIVGAN CPIESLDYEI EN+ FKQDWR+R+K+EI QY   KW LA LIG+ TGL 
Sbjct: 50  TSQIAIVGANTCPIESLDYEIFENDFFKQDWRSRKKIEILQYTFLKWALAFLIGLATGLV 109

Query: 119 AVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSINLGLAILAAILCAYIAPAAAGS 178
               N  VENIAGFKLLLI NLML +++F  F A    NL LA  AA LCA+IAPAAAGS
Sbjct: 110 GFLNNLGVENIAGFKLLLIGNLMLKEKYFQAFFAFAGCNLILATAAASLCAFIAPAAAGS 169

Query: 179 GIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQG 238
           GIPEVKAYLNGIDA+SILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQG
Sbjct: 170 GIPEVKAYLNGIDAYSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQG 229

Query: 239 GSKKYHLTWRWLRYFKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALL 298
           GSKKY LTW+WLR+FKNDRDRRDLITCGAAAGVA AFRAPVGGVLFALEEAASWWR+ALL
Sbjct: 230 GSKKYRLTWKWLRFFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRNALL 289

Query: 299 WRTFFTTAVVAVVLRGFIEFCRSGRCGLFGQGGLIMFDVNSAKNSYSSADLLAVIFLGVI 358
           WRTFFTTAVVAVVLR  IEFCRSGRCGLFG+GGLIMFDVNS    YS+ DLLA++FLGVI
Sbjct: 290 WRTFFTTAVVAVVLRSLIEFCRSGRCGLFGKGGLIMFDVNSGPVLYSTPDLLAIVFLGVI 349

Query: 359 GGIFGSFYNYLVDKVLRTYSIINERGPIFKVLLVAAVSLLTSCCSYGLPWLSHCIPCPSY 418
           GG+ GS YNYLVDKVLRTYSIINE+GP FK++LV AVS+L+SCC++GLPWLS C PCP  
Sbjct: 350 GGVLGSLYNYLVDKVLRTYSIINEKGPRFKIMLVMAVSILSSCCAFGLPWLSQCTPCPIG 409

Query: 419 LEADRCPTVGRSGNYKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSGTSKEFHLSTLLVF 478
           +E  +CP+VGRS  YK+FQCP  HYNDL+SL LNTNDDAIRNLF+S +  EFH+STL +F
Sbjct: 410 IEEGKCPSVGRSSIYKSFQCPPNHYNDLSSLLLNTNDDAIRNLFTSRSENEFHISTLAIF 469

Query: 479 FVAIYCLGIITYGIAVPSGLFIPVILAGASYGRLVGNLLGALSDLDTGLFALLGAASFLG 538
           FVA+YCLGIITYGIA+PSGLFIPVILAGASYGRLVG LLG +S LD GLF+LLGAASFLG
Sbjct: 470 FVAVYCLGIITYGIAIPSGLFIPVILAGASYGRLVGRLLGPVSQLDVGLFSLLGAASFLG 529

Query: 539 GTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADSFNQGVYDQIVKLKGLPYLEAH 598
           GTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVAD FN+GVYDQIV +KGLPY+E H
Sbjct: 530 GTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADCFNRGVYDQIVTMKGLPYMEDH 589

Query: 599 AEPYMKNLVASDVVSGPLITFSGVEKVGNIMHALRLTRHNGFPVIDEPPLTPAPELCGLV 658
           AEPYM+NLVA DVVSG LI+FS VEKVG I  AL++TRHNGFPVIDEPP T A ELCG+ 
Sbjct: 590 AEPYMRNLVAKDVVSGALISFSRVEKVGVIWQALKMTRHNGFPVIDEPPFTEASELCGIA 649

Query: 659 LRSHLLVLLKGKKFTKQKTMTGSDIMRRFKAHDFAKAGSGKGVKLEDLDIKEEEMEMFVD 718
           LRSHLLVLL+GKKF+KQ+T  GS I+R  KA DF KAG GKG+K+EDLD+ EEEMEM+VD
Sbjct: 650 LRSHLLVLLQGKKFSKQRTTFGSQILRSCKARDFGKAGLGKGLKIEDLDLSEEEMEMYVD 709

Query: 719 LHPITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRPPIVGILTRHDFMPEHVL 778
           LHPITNTSPYTV+ET+SLAKAA+LFRQL LRHLCVVPKTPGRPPIVGILTRHDFMPEHVL
Sbjct: 710 LHPITNTSPYTVLETLSLAKAAILFRQLGLRHLCVVPKTPGRPPIVGILTRHDFMPEHVL 769

Query: 779 GLYPHI 784
           GLYPHI
Sbjct: 770 GLYPHI 775

Voltage-gated chloride channel.
Arabidopsis thaliana (taxid: 3702)

>sp\|P60300\|CLCG_ARATH Putative chloride channel-like protein CLC-g OS=Arabidopsis thaliana GN=CBSCLC6 PE=2 SV=2	Back alignment and function description

>sp\|P92941\|CLCA_ARATH Chloride channel protein CLC-a OS=Arabidopsis thaliana GN=CLC-A PE=1 SV=2	Back alignment and function description

>sp\|P92942\|CLCB_ARATH Chloride channel protein CLC-b OS=Arabidopsis thaliana GN=CLC-B PE=1 SV=1	Back alignment and function description

>sp\|P92943\|CLCD_ARATH Chloride channel protein CLC-d OS=Arabidopsis thaliana GN=CLC-D PE=1 SV=2	Back alignment and function description

>sp\|O70496\|CLCN7_MOUSE H(+)/Cl(-) exchange transporter 7 OS=Mus musculus GN=Clcn7 PE=1 SV=1	Back alignment and function description

>sp\|P51799\|CLCN7_RAT H(+)/Cl(-) exchange transporter 7 OS=Rattus norvegicus GN=Clcn7 PE=2 SV=1	Back alignment and function description

>sp\|P51798\|CLCN7_HUMAN H(+)/Cl(-) exchange transporter 7 OS=Homo sapiens GN=CLCN7 PE=1 SV=2	Back alignment and function description

>sp\|Q4PKH3\|CLCN7_BOVIN H(+)/Cl(-) exchange transporter 7 OS=Bos taurus GN=CLCN7 PE=2 SV=1	Back alignment and function description

>sp\|Q54AX6\|CLCA_DICDI Chloride channel protein A OS=Dictyostelium discoideum GN=clcA PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		789
294715576		789	chloride channel protein [Citrus trifoli	1.0	1.0	0.991	0.0
224120030		743	Cl-channel clc-7 [Populus trichocarpa] g	0.935	0.993	0.821	0.0
224129480		743	Cl-channel clc-7 [Populus trichocarpa] g	0.935	0.993	0.825	0.0
297739465		742	unnamed protein product [Vitis vinifera]	0.934	0.993	0.804	0.0
225465251		771	PREDICTED: chloride channel protein CLC-	0.961	0.984	0.775	0.0
15240576		779	chloride channel protein CLC-c [Arabidop	0.979	0.992	0.773	0.0
297795753		778	CLC-C [Arabidopsis lyrata subsp. lyrata]	0.972	0.985	0.768	0.0
1360090		780	C1C-Nt1 [Nicotiana tabacum]	0.984	0.996	0.772	0.0
289541481		775	chloride channel C [Eutrema halophilum]	0.970	0.988	0.769	0.0
1773014		764	chloride channel Stclc1 [Solanum tuberos	0.959	0.990	0.782	0.0

>gi\|294715576\|gb\|ADF30876.1\| chloride channel protein [Citrus trifoliata]	Back alignment and taxonomy information

 Score = 1599 bits (4141), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 782/789 (99%), Positives = 784/789 (99%)

Query: 1   MDHGSRGDREENDIEVEGGGHNGSFESERRKFVERMGSGTSEDHNLREPLLLKCRTNTTS 60
           MDHGSRGDREENDIEVEGGGHNGSFESERRKFVERMGSGTSEDHNLREPLLLKCRTNTTS
Sbjct: 1   MDHGSRGDREENDIEVEGGGHNGSFESERRKFVERMGSGTSEDHNLREPLLLKCRTNTTS 60

Query: 61  QIAIVGANICPIESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAV 120
           QIAIVGANI PIESLDYEIVENELFKQDWRARRKVEIFQYVV KWTLALLIGVLTGLAAV
Sbjct: 61  QIAIVGANISPIESLDYEIVENELFKQDWRARRKVEIFQYVVLKWTLALLIGVLTGLAAV 120

Query: 121 FCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSINLGLAILAAILCAYIAPAAAGSGI 180
           FCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSINLGLAILAAILCAYIAPAAAGSGI
Sbjct: 121 FCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSINLGLAILAAILCAYIAPAAAGSGI 180

Query: 181 PEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGS 240
           PEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGS
Sbjct: 181 PEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGS 240

Query: 241 KKYHLTWRWLRYFKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWR 300
           KKYHLTWRWLRYFKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWR
Sbjct: 241 KKYHLTWRWLRYFKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWR 300

Query: 301 TFFTTAVVAVVLRGFIEFCRSGRCGLFGQGGLIMFDVNSAKNSYSSADLLAVIFLGVIGG 360
           TFFTTAVVAVVLRGFIEFCRSGRCGLFGQGGLIMFDVNSAKNSYSSADLLAVIFLGVIGG
Sbjct: 301 TFFTTAVVAVVLRGFIEFCRSGRCGLFGQGGLIMFDVNSAKNSYSSADLLAVIFLGVIGG 360

Query: 361 IFGSFYNYLVDKVLRTYSIINERGPIFKVLLVAAVSLLTSCCSYGLPWLSHCIPCPSYLE 420
           IFGSFYNYLVDKVLRTYSIINERGPIFKVLLVAAVSLLTSCCSYGLPWLSHCIPCPSYLE
Sbjct: 361 IFGSFYNYLVDKVLRTYSIINERGPIFKVLLVAAVSLLTSCCSYGLPWLSHCIPCPSYLE 420

Query: 421 ADRCPTVGRSGNYKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSGTSKEFHLSTLLVFFV 480
           ADRCPTVGRSGNYKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSGTSKEFHLSTLLVFFV
Sbjct: 421 ADRCPTVGRSGNYKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSGTSKEFHLSTLLVFFV 480

Query: 481 AIYCLGIITYGIAVPSGLFIPVILAGASYGRLVGNLLGALSDLDTGLFALLGAASFLGGT 540
           AIYCLGIITYGIAVPSGLFIPVILAGASYGRLVGNLLGALS LD GLFALLGAASFLGGT
Sbjct: 481 AIYCLGIITYGIAVPSGLFIPVILAGASYGRLVGNLLGALSGLDAGLFALLGAASFLGGT 540

Query: 541 MRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADSFNQGVYDQIVKLKGLPYLEAHAE 600
           MRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADSFNQGVYDQIVKLKGLPYLEAHAE
Sbjct: 541 MRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADSFNQGVYDQIVKLKGLPYLEAHAE 600

Query: 601 PYMKNLVASDVVSGPLITFSGVEKVGNIMHALRLTRHNGFPVIDEPPLTPAPELCGLVLR 660
           PYMKNLVASDVVSGPLITFSGVEKVGNIMHALRLTRHNGFPVIDEPPLTPAPELCGLVLR
Sbjct: 601 PYMKNLVASDVVSGPLITFSGVEKVGNIMHALRLTRHNGFPVIDEPPLTPAPELCGLVLR 660

Query: 661 SHLLVLLKGKKFTKQKTMTGSDIMRRFKAHDFAKAGSGKGVKLEDLDIKEEEMEMFVDLH 720
           SHLLVLLKGKKFTKQKTM GSDIMRRFKAHDFAKAGSGKGVKLEDLDI+EEEMEMFVDLH
Sbjct: 661 SHLLVLLKGKKFTKQKTMAGSDIMRRFKAHDFAKAGSGKGVKLEDLDIEEEEMEMFVDLH 720

Query: 721 PITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRPPIVGILTRHDFMPEHVLGL 780
           PITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRPPIVGILTRHDFMPEHVLGL
Sbjct: 721 PITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRPPIVGILTRHDFMPEHVLGL 780

Query: 781 YPHIVNRHK 789
           YPH+VNRHK
Sbjct: 781 YPHVVNRHK 789

Source: Citrus trifoliata

Species: Citrus trifoliata

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224120030\|ref\|XP_002331119.1\| Cl-channel clc-7 [Populus trichocarpa] gi\|222872847\|gb\|EEF09978.1\| Cl-channel clc-7 [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224129480\|ref\|XP_002328727.1\| Cl-channel clc-7 [Populus trichocarpa] gi\|222839025\|gb\|EEE77376.1\| Cl-channel clc-7 [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297739465\|emb\|CBI29647.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|225465251\|ref\|XP_002268066.1\| PREDICTED: chloride channel protein CLC-c [Vitis vinifera] gi\|301318128\|gb\|ADK66979.1\| chloride channel ClC1 [Vitis vinifera]	Back alignment and taxonomy information

>gi|15240576|ref|NP_199800.1| chloride channel protein CLC-c [Arabidopsis thaliana] gi|41688510|sp|Q96282.1|CLCC_ARATH RecName: Full=Chloride channel protein CLC-c; Short=AtCLC-c; AltName: Full=CBS domain-containing protein CBSCLC4 gi|1655536|emb|CAA70310.1| chloride channel [Arabidopsis thaliana] gi|1742957|emb|CAA96059.1| CLC-c chloride channel protein [Arabidopsis thaliana] gi|8777420|dbj|BAA97010.1| chloride channel [Arabidopsis thaliana] gi|21539519|gb|AAM53312.1| chloride channel [Arabidopsis thaliana] gi|24899767|gb|AAN65098.1| chloride channel [Arabidopsis thaliana] gi|332008485|gb|AED95868.1| chloride channel protein CLC-c [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|297795753\|ref\|XP_002865761.1\| CLC-C [Arabidopsis lyrata subsp. lyrata] gi\|297311596\|gb\|EFH42020.1\| CLC-C [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|1360090\|emb\|CAA64829.1\| C1C-Nt1 [Nicotiana tabacum]	Back alignment and taxonomy information

>gi\|289541481\|gb\|ADD09861.1\| chloride channel C [Eutrema halophilum]	Back alignment and taxonomy information

>gi\|1773014\|emb\|CAA71369.1\| chloride channel Stclc1 [Solanum tuberosum]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		789
TAIR\|locus:2158809		779	CLC-C "chloride channel C" [Ar	0.979	0.992	0.638	4.1e-262
TAIR\|locus:2164466		775	CLC-A "chloride channel A" [Ar	0.965	0.983	0.437	7.5e-176
TAIR\|locus:2095123		780	CLC-B "chloride channel B" [Ar	0.935	0.946	0.455	7.7e-174
TAIR\|locus:2179724		792	CLC-D "chloride channel D" [Ar	0.883	0.880	0.380	1.1e-121
ZFIN\|ZDB-GENE-061103-196		795	clcn7 "chloride channel 7" [Da	0.865	0.859	0.286	1.1e-69
UNIPROTKB\|F1NS73		802	CLCN7 "Uncharacterized protein	0.869	0.855	0.282	2.7e-68
UNIPROTKB\|F1RG09		809	LOC100626534 "Uncharacterized	0.869	0.847	0.288	2.7e-68
MGI\|MGI:1347048		803	Clcn7 "chloride channel 7" [Mu	0.869	0.854	0.288	3.5e-68
RGD\|61836		803	Clcn7 "chloride channel, volta	0.869	0.854	0.288	3.5e-68
UNIPROTKB\|P51798		805	CLCN7 "H(+)/Cl(-) exchange tra	0.869	0.852	0.288	4.4e-68

TAIR\|locus:2158809 CLC-C "chloride channel C" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2522 (892.8 bits), Expect = 4.1e-262, P = 4.1e-262
 Identities = 502/786 (63%), Positives = 557/786 (70%)

Query:     1 MDHGSRGDREENDIEVEGGGHNGSFESERRKFVERMGSGTSEDHNL--REPLLLKCRTNT 58
             MD    GD   +DIEVEGG  +G FE   RK      SG  +D ++  R+PLL + R NT
Sbjct:     1 MDDRHEGDH--HDIEVEGGALHG-FE---RKI-----SGILDDGSVGFRQPLLARNRKNT 49

Query:    59 TSQIAIVGANICPIESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLA 118
             TSQIAIVGAN CPIESLDYEI EN+ FKQDWR+R+K+EI QY   KW LA LIG+ TGL 
Sbjct:    50 TSQIAIVGANTCPIESLDYEIFENDFFKQDWRSRKKIEILQYTFLKWALAFLIGLATGLV 109

Query:   119 AVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSXXXXXXXXXXXXXXXXXXXXXGS 178
                 N  VENIAGFKLLLI NLML +++F  F A                        GS
Sbjct:   110 GFLNNLGVENIAGFKLLLIGNLMLKEKYFQAFFAFAGCNLILATAAASLCAFIAPAAAGS 169

Query:   179 GIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQG 238
             GIPEVKAYLNGIDA+SILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQG
Sbjct:   170 GIPEVKAYLNGIDAYSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQG 229

Query:   239 GSKKYHLTWRWLRYFKNDRDRRDLITCXXXXXXXXXXXXXXXXXLFALEEAASWWRSALL 298
             GSKKY LTW+WLR+FKNDRDRRDLITC                 LFALEEAASWWR+ALL
Sbjct:   230 GSKKYRLTWKWLRFFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRNALL 289

Query:   299 WRXXXXXXXXXXXLRGFIEFCRSGRCGLFGQGGLIMFDVNSAKNSYSSADXXXXXXXXXX 358
             WR           LR  IEFCRSGRCGLFG+GGLIMFDVNS    YS+ D          
Sbjct:   290 WRTFFTTAVVAVVLRSLIEFCRSGRCGLFGKGGLIMFDVNSGPVLYSTPDLLAIVFLGVI 349

Query:   359 XXXXXSFYNYLVDKVLRTYSIINERGPIFKXXXXXXXXXXTSCCSYGLPWLSHCIPCPSY 418
                  S YNYLVDKVLRTYSIINE+GP FK          +SCC++GLPWLS C PCP  
Sbjct:   350 GGVLGSLYNYLVDKVLRTYSIINEKGPRFKIMLVMAVSILSSCCAFGLPWLSQCTPCPIG 409

Query:   419 LEADRCPTVGRSGNYKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSGTSKEFHLSTLLVF 478
             +E  +CP+VGRS  YK+FQCP  HYNDL+SL LNTNDDAIRNLF+S +  EFH+STL +F
Sbjct:   410 IEEGKCPSVGRSSIYKSFQCPPNHYNDLSSLLLNTNDDAIRNLFTSRSENEFHISTLAIF 469

Query:   479 FVAIYCLGIITYGIAVPSGLFIPVILAGASYGRLVGNLLGALSDLDTXXXXXXXXXXXXX 538
             FVA+YCLGIITYGIA+PSGLFIPVILAGASYGRLVG LLG +S LD              
Sbjct:   470 FVAVYCLGIITYGIAIPSGLFIPVILAGASYGRLVGRLLGPVSQLDVGLFSLLGAASFLG 529

Query:   539 XTMRMTVSXXXXXXXXXXXXXXXXXXXXXXXXSKTVADSFNQGVYDQIVKLKGLPYLEAH 598
              TMRMTVS                        SKTVAD FN+GVYDQIV +KGLPY+E H
Sbjct:   530 GTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADCFNRGVYDQIVTMKGLPYMEDH 589

Query:   599 AEPYMKNLVASDVVSGPLITFSGVEKVGNIMHALRLTRHNGFPVIDEPPLTPAPEXXXXX 658
             AEPYM+NLVA DVVSG LI+FS VEKVG I  AL++TRHNGFPVIDEPP T A E     
Sbjct:   590 AEPYMRNLVAKDVVSGALISFSRVEKVGVIWQALKMTRHNGFPVIDEPPFTEASELCGIA 649

Query:   659 XXXXXXXXXKGKKFTKQKTMTGSDIMRRFKAHDFAKAGSGKGVKLEDLDIKEEEMEMFVD 718
                      +GKKF+KQ+T  GS I+R  KA DF KAG GKG+K+EDLD+ EEEMEM+VD
Sbjct:   650 LRSHLLVLLQGKKFSKQRTTFGSQILRSCKARDFGKAGLGKGLKIEDLDLSEEEMEMYVD 709

Query:   719 LHPITNTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRPPIVGILTRHDFMPEHVL 778
             LHPITNTSPYTV+ET+SLAKAA+LFRQL LRHLCVVPKTPGRPPIVGILTRHDFMPEHVL
Sbjct:   710 LHPITNTSPYTVLETLSLAKAAILFRQLGLRHLCVVPKTPGRPPIVGILTRHDFMPEHVL 769

Query:   779 GLYPHI 784
             GLYPHI
Sbjct:   770 GLYPHI 775

GO:0005216 "ion channel activity" evidence=IEA

GO:0005247 "voltage-gated chloride channel activity" evidence=IEA;ISS

GO:0005253 "anion channel activity" evidence=ISS

GO:0006821 "chloride transport" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0005622 "intracellular" evidence=TAS

TAIR\|locus:2164466 CLC-A "chloride channel A" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2095123 CLC-B "chloride channel B" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2179724 CLC-D "chloride channel D" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-061103-196 clcn7 "chloride channel 7" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NS73 CLCN7 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1RG09 LOC100626534 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

MGI\|MGI:1347048 Clcn7 "chloride channel 7" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

RGD\|61836 Clcn7 "chloride channel, voltage-sensitive 7" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|P51798 CLCN7 "H(+)/Cl(-) exchange transporter 7" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q96282	CLCC_ARATH	No assigned EC number	0.7735	0.9797	0.9922	yes	no
O70496	CLCN7_MOUSE	No assigned EC number	0.3651	0.8631	0.8480	yes	no
P51798	CLCN7_HUMAN	No assigned EC number	0.3651	0.8631	0.8459	yes	no
P51799	CLCN7_RAT	No assigned EC number	0.3651	0.8631	0.8480	yes	no
Q54AX6	CLCA_DICDI	No assigned EC number	0.3210	0.8757	0.8006	yes	no
Q4PKH3	CLCN7_BOVIN	No assigned EC number	0.3581	0.8631	0.8417	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		789
cd03685		466	cd03685, ClC_6_like, ClC-6-like chloride channel p	1e-174
cd03684		445	cd03684, ClC_3_like, ClC-3-like chloride channel p	6e-91
cd01036		416	cd01036, ClC_euk, Chloride channel, ClC	4e-74
pfam00654		345	pfam00654, Voltage_CLC, Voltage gated chloride cha	1e-73
cd03685		466	cd03685, ClC_6_like, ClC-6-like chloride channel p	4e-58
COG0038		443	COG0038, EriC, Chloride channel protein EriC [Inor	1e-51
cd01031		402	cd01031, EriC, ClC chloride channel EriC	4e-49
cd00400		383	cd00400, Voltage_gated_ClC, CLC voltage-gated chlo	7e-49
cd03683		426	cd03683, ClC_1_like, ClC-1-like chloride channel p	1e-42
PRK05277		438	PRK05277, PRK05277, chloride channel protein; Prov	4e-36
cd01034		390	cd01034, EriC_like, ClC chloride channel family	1e-33
cd01036		416	cd01036, ClC_euk, Chloride channel, ClC	2e-30
cd03683		426	cd03683, ClC_1_like, ClC-1-like chloride channel p	2e-22
cd04591		105	cd04591, CBS_pair_EriC_assoc_euk_bac, This cd cont	5e-21
cd01033		388	cd01033, ClC_like, Putative ClC chloride channel	1e-15
PRK01862		574	PRK01862, PRK01862, putative voltage-gated ClC-typ	2e-07
pfam00654		345	pfam00654, Voltage_CLC, Voltage gated chloride cha	1e-06
cd03682		378	cd03682, ClC_sycA_like, ClC sycA-like chloride cha	2e-06
PRK01610		418	PRK01610, PRK01610, putative voltage-gated ClC-typ	8e-06
cd00400		383	cd00400, Voltage_gated_ClC, CLC voltage-gated chlo	3e-05
cd02205		113	cd02205, CBS_pair, The CBS domain, named after hum	3e-05
cd04611		111	cd04611, CBS_pair_PAS_GGDEF_DUF1_assoc, This cd co	0.001
pfam00571		57	pfam00571, CBS, CBS domain	0.002
PRK01610		418	PRK01610, PRK01610, putative voltage-gated ClC-typ	0.003

>gnl\|CDD\|239657 cd03685, ClC_6_like, ClC-6-like chloride channel proteins	Back alignment and domain information

 Score =  509 bits (1312), Expect = e-174
 Identities = 180/341 (52%), Positives = 232/341 (68%)

Query: 73  ESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGF 132
           ESLDYE++EN+LF+++WR R+K ++ QY   KW + LLIG+ TGL A F +  VEN+AG 
Sbjct: 1   ESLDYEVIENDLFREEWRKRKKKQVLQYEFLKWIICLLIGIFTGLVAYFIDLAVENLAGL 60

Query: 133 KLLLINNLMLNDRHFMGFVANTSINLGLAILAAILCAYIAPAAAGSGIPEVKAYLNGIDA 192
           K L++ N +   R F  F+    +NL L ++AA+L AYIAP AAGSGIPEVK YLNG+  
Sbjct: 61  KFLVVKNYIEKGRLFTAFLVYLGLNLVLVLVAALLVAYIAPTAAGSGIPEVKGYLNGVKI 120

Query: 193 HSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRY 252
             IL   TL VKI G I  V+ G  +GKEGPM+H GACIA  L QGGS    L +RW RY
Sbjct: 121 PHILRLKTLLVKIVGVILSVSGGLALGKEGPMIHIGACIAAGLSQGGSTSLRLDFRWFRY 180

Query: 253 FKNDRDRRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVL 312
           F+NDRD+RD +TCGAAAGVA AF APVGGVLF+LEE AS+W  AL WRTFF++ +V   L
Sbjct: 181 FRNDRDKRDFVTCGAAAGVAAAFGAPVGGVLFSLEEVASFWNQALTWRTFFSSMIVTFTL 240

Query: 313 RGFIEFCRSGRCGLFGQGGLIMFDVNSAKNSYSSADLLAVIFLGVIGGIFGSFYNYLVDK 372
             F+  C SG+CGLFG GGLIMFD +S K  Y+  +L+  + +GVIGG+ G+ +N+L  K
Sbjct: 241 NFFLSGCNSGKCGLFGPGGLIMFDGSSTKYLYTYFELIPFMLIGVIGGLLGALFNHLNHK 300

Query: 373 VLRTYSIINERGPIFKVLLVAAVSLLTSCCSYGLPWLSHCI 413
           V R    IN +G + KVL    VSL+TS  ++    L   +
Sbjct: 301 VTRFRKRINHKGKLLKVLEALLVSLVTSVVAFPQTLLIFFV 341

This CD includes ClC-6, ClC-7 and ClC-B, C, D in plants. Proteins in this family are ubiquitous in eukarotes and their functions are unclear. They are expressed in intracellular organelles membranes. This family belongs to the ClC superfamily of chloride ion channels, which share the unique double-barreled architecture and voltage-dependent gating mechanism. The gating is conferred by the permeating anion itself, acting as the gating charge. ClC chloride ion channel superfamily perform a variety of functions including cellular excitability regulation, cell volume regulation, membrane potential stabilization, acidification of intracellular organelles, signal transduction, and transepithelial transport in animals. Length = 466

>gnl\|CDD\|239656 cd03684, ClC_3_like, ClC-3-like chloride channel proteins	Back alignment and domain information

>gnl\|CDD\|238507 cd01036, ClC_euk, Chloride channel, ClC	Back alignment and domain information

>gnl\|CDD\|216046 pfam00654, Voltage_CLC, Voltage gated chloride channel	Back alignment and domain information

>gnl\|CDD\|239657 cd03685, ClC_6_like, ClC-6-like chloride channel proteins	Back alignment and domain information

>gnl\|CDD\|223116 COG0038, EriC, Chloride channel protein EriC [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|238504 cd01031, EriC, ClC chloride channel EriC	Back alignment and domain information

>gnl\|CDD\|238233 cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel	Back alignment and domain information

>gnl\|CDD\|239655 cd03683, ClC_1_like, ClC-1-like chloride channel proteins	Back alignment and domain information

>gnl\|CDD\|235385 PRK05277, PRK05277, chloride channel protein; Provisional	Back alignment and domain information

>gnl\|CDD\|238506 cd01034, EriC_like, ClC chloride channel family	Back alignment and domain information

>gnl\|CDD\|238507 cd01036, ClC_euk, Chloride channel, ClC	Back alignment and domain information

>gnl\|CDD\|239655 cd03683, ClC_1_like, ClC-1-like chloride channel proteins	Back alignment and domain information

>gnl\|CDD\|239964 cd04591, CBS_pair_EriC_assoc_euk_bac, This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in eukaryotes and bacteria	Back alignment and domain information

>gnl\|CDD\|238505 cd01033, ClC_like, Putative ClC chloride channel	Back alignment and domain information

>gnl\|CDD\|234987 PRK01862, PRK01862, putative voltage-gated ClC-type chloride channel ClcB; Provisional	Back alignment and domain information

>gnl\|CDD\|216046 pfam00654, Voltage_CLC, Voltage gated chloride channel	Back alignment and domain information

>gnl\|CDD\|239654 cd03682, ClC_sycA_like, ClC sycA-like chloride channel proteins	Back alignment and domain information

>gnl\|CDD\|234963 PRK01610, PRK01610, putative voltage-gated ClC-type chloride channel ClcB; Provisional	Back alignment and domain information

>gnl\|CDD\|238233 cd00400, Voltage_gated_ClC, CLC voltage-gated chloride channel	Back alignment and domain information

>gnl\|CDD\|239067 cd02205, CBS_pair, The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>gnl\|CDD\|239984 cd04611, CBS_pair_PAS_GGDEF_DUF1_assoc, This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with a PAS domain, a GGDEF (DiGuanylate-Cyclase (DGC) domain, and a DUF1 domain downstream	Back alignment and domain information

>gnl\|CDD\|201313 pfam00571, CBS, CBS domain	Back alignment and domain information

>gnl\|CDD\|234963 PRK01610, PRK01610, putative voltage-gated ClC-type chloride channel ClcB; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		789
KOG0474		762	consensus Cl- channel CLC-7 and related proteins (	100.0
KOG0475		696	consensus Cl- channel CLC-3 and related proteins (	100.0
KOG0476		931	consensus Cl- channel CLC-2 and related proteins (	100.0
cd03685		466	ClC_6_like ClC-6-like chloride channel proteins. T	100.0
PRK01862		574	putative voltage-gated ClC-type chloride channel C	100.0
cd03684		445	ClC_3_like ClC-3-like chloride channel proteins. T	100.0
cd03683		426	ClC_1_like ClC-1-like chloride channel proteins. T	100.0
cd01036		416	ClC_euk Chloride channel, ClC. These domains are f	100.0
cd01031		402	EriC ClC chloride channel EriC. This domain is fou	100.0
PRK01610		418	putative voltage-gated ClC-type chloride channel C	100.0
PRK05277		438	chloride channel protein; Provisional	100.0
cd01034		390	EriC_like ClC chloride channel family. These prote	100.0
cd01033		388	ClC_like Putative ClC chloride channel. Clc protei	100.0
PF00654		355	Voltage_CLC: Voltage gated chloride channel Mutati	100.0
COG0038		443	EriC Chloride channel protein EriC [Inorganic ion	100.0
cd00400		383	Voltage_gated_ClC CLC voltage-gated chloride chann	100.0
cd03682		378	ClC_sycA_like ClC sycA-like chloride channel prote	100.0
PRK03655		414	putative ion channel protein; Provisional	100.0
cd01034		390	EriC_like ClC chloride channel family. These prote	99.68
cd01033		388	ClC_like Putative ClC chloride channel. Clc protei	99.66
PRK05277		438	chloride channel protein; Provisional	99.6
COG3448		382	CBS-domain-containing membrane protein [Signal tra	99.58
COG2524		294	Predicted transcriptional regulator, contains C-te	99.56
cd00400		383	Voltage_gated_ClC CLC voltage-gated chloride chann	99.54
PRK10892		326	D-arabinose 5-phosphate isomerase; Provisional	99.54
PRK11543		321	gutQ D-arabinose 5-phosphate isomerase; Provisiona	99.53
PRK01862		574	putative voltage-gated ClC-type chloride channel C	99.5
PRK01610		418	putative voltage-gated ClC-type chloride channel C	99.5
cd04641		120	CBS_pair_28 The CBS domain, named after human CBS,	99.42
cd03682		378	ClC_sycA_like ClC sycA-like chloride channel prote	99.42
COG4109		432	Predicted transcriptional regulator containing CBS	99.4
cd01031		402	EriC ClC chloride channel EriC. This domain is fou	99.39
COG3620		187	Predicted transcriptional regulator with C-termina	99.38
cd04619		114	CBS_pair_6 The CBS domain, named after human CBS,	99.37
PRK07807		479	inosine 5-monophosphate dehydrogenase; Validated	99.35
cd04603		111	CBS_pair_KefB_assoc This cd contains two tandem re	99.34
cd04618		98	CBS_pair_5 The CBS domain, named after human CBS,	99.34
cd04600		124	CBS_pair_HPP_assoc This cd contains two tandem rep	99.34
TIGR03520		408	GldE gliding motility-associated protein GldE. Mem	99.33
cd04617		118	CBS_pair_4 The CBS domain, named after human CBS,	99.32
cd04593		115	CBS_pair_EriC_assoc_bac_arch This cd contains two	99.31
PRK15094		292	magnesium/cobalt efflux protein CorC; Provisional	99.3
cd04596		108	CBS_pair_DRTGG_assoc This cd contains two tandem r	99.29
cd04605		110	CBS_pair_MET2_assoc This cd contains two tandem re	99.29
cd04608		124	CBS_pair_PALP_assoc This cd contains two tandem re	99.28
cd04639		111	CBS_pair_26 The CBS domain, named after human CBS,	99.28
cd04586		135	CBS_pair_BON_assoc This cd contains two tandem rep	99.27
cd04803		122	CBS_pair_15 The CBS domain, named after human CBS,	99.27
cd04583		109	CBS_pair_ABC_OpuCA_assoc2 This cd contains two tan	99.26
cd04801		114	CBS_pair_M50_like This cd contains two tandem repe	99.26
cd04624		112	CBS_pair_11 The CBS domain, named after human CBS,	99.26
cd04607		113	CBS_pair_NTP_transferase_assoc This cd contains tw	99.26
cd04623		113	CBS_pair_10 The CBS domain, named after human CBS,	99.25
cd04582		106	CBS_pair_ABC_OpuCA_assoc This cd contains two tand	99.25
cd04595		110	CBS_pair_DHH_polyA_Pol_assoc This cd contains two	99.24
cd04614		96	CBS_pair_1 The CBS domain, named after human CBS,	99.24
cd04635		122	CBS_pair_22 The CBS domain, named after human CBS,	99.24
cd04613		114	CBS_pair_SpoIVFB_EriC_assoc2 This cd contains two	99.24
cd04629		114	CBS_pair_16 The CBS domain, named after human CBS,	99.24
cd04615		113	CBS_pair_2 The CBS domain, named after human CBS,	99.23
cd04631		125	CBS_pair_18 The CBS domain, named after human CBS,	99.23
cd04630		114	CBS_pair_17 The CBS domain, named after human CBS,	99.23
cd04627		123	CBS_pair_14 The CBS domain, named after human CBS,	99.22
cd04636		132	CBS_pair_23 The CBS domain, named after human CBS,	99.22
PRK07107		502	inosine 5-monophosphate dehydrogenase; Validated	99.21
cd04620		115	CBS_pair_7 The CBS domain, named after human CBS,	99.21
TIGR01137		454	cysta_beta cystathionine beta-synthase. Members of	99.21
cd04604		114	CBS_pair_KpsF_GutQ_assoc This cd contains two tand	99.2
cd04626		111	CBS_pair_13 The CBS domain, named after human CBS,	99.2
cd04588		110	CBS_pair_CAP-ED_DUF294_assoc_arch This cd contains	99.2
cd04602		114	CBS_pair_IMPDH_2 This cd contains two tandem repea	99.2
cd04632		128	CBS_pair_19 The CBS domain, named after human CBS,	99.19
cd04622		113	CBS_pair_9 The CBS domain, named after human CBS,	99.19
cd04591		105	CBS_pair_EriC_assoc_euk_bac This cd contains two t	99.19
cd04587		113	CBS_pair_CAP-ED_DUF294_PBI_assoc This cd contains	99.19
cd04642		126	CBS_pair_29 The CBS domain, named after human CBS,	99.19
cd04599		105	CBS_pair_GGDEF_assoc2 This cd contains two tandem	99.19
cd04601		110	CBS_pair_IMPDH This cd contains two tandem repeats	99.18
cd04637		122	CBS_pair_24 The CBS domain, named after human CBS,	99.18
cd04643		116	CBS_pair_30 The CBS domain, named after human CBS,	99.18
cd04611		111	CBS_pair_PAS_GGDEF_DUF1_assoc This cd contains two	99.18
cd04585		122	CBS_pair_ACT_assoc2 This cd contains two tandem re	99.18
PTZ00314		495	inosine-5'-monophosphate dehydrogenase; Provisiona	99.18
TIGR01302		450	IMP_dehydrog inosine-5'-monophosphate dehydrogenas	99.17
TIGR01303		475	IMP_DH_rel_1 IMP dehydrogenase family protein. Thi	99.17
cd04800		111	CBS_pair_CAP-ED_DUF294_PBI_assoc2 This cd contains	99.17
TIGR00400		449	mgtE Mg2+ transporter (mgtE). This family of proka	99.16
cd04621		135	CBS_pair_8 The CBS domain, named after human CBS,	99.16
PRK14869		546	putative manganese-dependent inorganic pyrophospha	99.15
cd04612		111	CBS_pair_SpoIVFB_EriC_assoc This cd contains two t	99.15
cd04640		126	CBS_pair_27 The CBS domain, named after human CBS,	99.15
cd04802		112	CBS_pair_3 The CBS domain, named after human CBS,	99.15
cd04590		111	CBS_pair_CorC_HlyC_assoc This cd contains two tand	99.15
cd04589		111	CBS_pair_CAP-ED_DUF294_assoc_bac This cd contains	99.15
PRK05567		486	inosine 5'-monophosphate dehydrogenase; Reviewed	99.14
cd02205		113	CBS_pair The CBS domain, named after human CBS, is	99.14
cd04609		110	CBS_pair_PALP_assoc2 This cd contains two tandem r	99.14
cd04610		107	CBS_pair_ParBc_assoc This cd contains two tandem r	99.12
cd04625		112	CBS_pair_12 The CBS domain, named after human CBS,	99.11
PF00654		355	Voltage_CLC: Voltage gated chloride channel Mutati	99.11
COG0517		117	FOG: CBS domain [General function prediction only]	99.11
TIGR00393		268	kpsF KpsF/GutQ family protein. This model describe	99.11
cd04606		109	CBS_pair_Mg_transporter This cd contains two tande	99.1
cd04594		104	CBS_pair_EriC_assoc_archaea This cd contains two t	99.09
PLN02274		505	inosine-5'-monophosphate dehydrogenase	99.09
cd04584		121	CBS_pair_ACT_assoc This cd contains two tandem rep	99.08
cd04633		121	CBS_pair_20 The CBS domain, named after human CBS,	99.07
COG0038		443	EriC Chloride channel protein EriC [Inorganic ion	99.07
PRK11573		413	hypothetical protein; Provisional	99.07
cd04598		119	CBS_pair_GGDEF_assoc This cd contains two tandem r	99.05
PRK03655		414	putative ion channel protein; Provisional	99.04
cd04634		143	CBS_pair_21 The CBS domain, named after human CBS,	99.03
cd04638		106	CBS_pair_25 The CBS domain, named after human CBS,	99.03
cd03684		445	ClC_3_like ClC-3-like chloride channel proteins. T	98.99
COG2905		610	Predicted signal-transduction protein containing c	98.95
COG1253		429	TlyC Hemolysins and related proteins containing CB	98.92
cd04592		133	CBS_pair_EriC_assoc_euk This cd contains two tande	98.89
cd03685		466	ClC_6_like ClC-6-like chloride channel proteins. T	98.88
COG2239		451	MgtE Mg/Co/Ni transporter MgtE (contains CBS domai	98.83
COG4536		423	CorB Putative Mg2+ and Co2+ transporter CorB [Inor	98.8
cd01036		416	ClC_euk Chloride channel, ClC. These domains are f	98.79
PF00571		57	CBS: CBS domain CBS domain web page. Mutations in	98.64
cd03683		426	ClC_1_like ClC-1-like chloride channel proteins. T	98.62
PF00571		57	CBS: CBS domain CBS domain web page. Mutations in	98.57
COG4535		293	CorC Putative Mg2+ and Co2+ transporter CorC [Inor	98.53
KOG2550		503	consensus IMP dehydrogenase/GMP reductase [Nucleot	98.34
KOG1764		381	consensus 5'-AMP-activated protein kinase, gamma s	98.27
TIGR01186		363	proV glycine betaine/L-proline transport ATP bindi	98.21
PRK10070		400	glycine betaine transporter ATP-binding subunit; P	98.18
COG3448		382	CBS-domain-containing membrane protein [Signal tra	98.11
PRK14869		546	putative manganese-dependent inorganic pyrophospha	97.93
cd04597		113	CBS_pair_DRTGG_assoc2 This cd contains two tandem	97.77
TIGR00400		449	mgtE Mg2+ transporter (mgtE). This family of proka	97.67
cd04597		113	CBS_pair_DRTGG_assoc2 This cd contains two tandem	97.64
cd04603		111	CBS_pair_KefB_assoc This cd contains two tandem re	97.54
COG2524		294	Predicted transcriptional regulator, contains C-te	97.5
cd04619		114	CBS_pair_6 The CBS domain, named after human CBS,	97.44
COG3620		187	Predicted transcriptional regulator with C-termina	97.42
cd04618		98	CBS_pair_5 The CBS domain, named after human CBS,	97.3
cd04641		120	CBS_pair_28 The CBS domain, named after human CBS,	97.18
cd04600		124	CBS_pair_HPP_assoc This cd contains two tandem rep	97.13
cd04606		109	CBS_pair_Mg_transporter This cd contains two tande	97.12
cd04607		113	CBS_pair_NTP_transferase_assoc This cd contains tw	97.11
cd04614		96	CBS_pair_1 The CBS domain, named after human CBS,	97.07
cd04627		123	CBS_pair_14 The CBS domain, named after human CBS,	97.07
cd04585		122	CBS_pair_ACT_assoc2 This cd contains two tandem re	97.06
cd04620		115	CBS_pair_7 The CBS domain, named after human CBS,	97.04
cd04592		133	CBS_pair_EriC_assoc_euk This cd contains two tande	97.04
smart00116		49	CBS Domain in cystathionine beta-synthase and othe	97.01
cd04615		113	CBS_pair_2 The CBS domain, named after human CBS,	97.01
cd04625		112	CBS_pair_12 The CBS domain, named after human CBS,	96.99
PRK05567		486	inosine 5'-monophosphate dehydrogenase; Reviewed	96.99
cd04617		118	CBS_pair_4 The CBS domain, named after human CBS,	96.99
cd04596		108	CBS_pair_DRTGG_assoc This cd contains two tandem r	96.98
cd04608		124	CBS_pair_PALP_assoc This cd contains two tandem re	96.96
cd04621		135	CBS_pair_8 The CBS domain, named after human CBS,	96.94
KOG0475		696	consensus Cl- channel CLC-3 and related proteins (	96.93
cd04630		114	CBS_pair_17 The CBS domain, named after human CBS,	96.91
smart00116		49	CBS Domain in cystathionine beta-synthase and othe	96.91
cd04604		114	CBS_pair_KpsF_GutQ_assoc This cd contains two tand	96.88
cd04803		122	CBS_pair_15 The CBS domain, named after human CBS,	96.88
cd04610		107	CBS_pair_ParBc_assoc This cd contains two tandem r	96.88
cd04587		113	CBS_pair_CAP-ED_DUF294_PBI_assoc This cd contains	96.87
cd04611		111	CBS_pair_PAS_GGDEF_DUF1_assoc This cd contains two	96.86
KOG1764		381	consensus 5'-AMP-activated protein kinase, gamma s	96.86
cd04635		122	CBS_pair_22 The CBS domain, named after human CBS,	96.86
cd04639		111	CBS_pair_26 The CBS domain, named after human CBS,	96.85
PRK10892		326	D-arabinose 5-phosphate isomerase; Provisional	96.83
cd04613		114	CBS_pair_SpoIVFB_EriC_assoc2 This cd contains two	96.82
cd04602		114	CBS_pair_IMPDH_2 This cd contains two tandem repea	96.78
cd04582		106	CBS_pair_ABC_OpuCA_assoc This cd contains two tand	96.78
cd04583		109	CBS_pair_ABC_OpuCA_assoc2 This cd contains two tan	96.78
cd04631		125	CBS_pair_18 The CBS domain, named after human CBS,	96.77
cd04802		112	CBS_pair_3 The CBS domain, named after human CBS,	96.77
cd04623		113	CBS_pair_10 The CBS domain, named after human CBS,	96.76
cd04601		110	CBS_pair_IMPDH This cd contains two tandem repeats	96.76
cd04624		112	CBS_pair_11 The CBS domain, named after human CBS,	96.75
PRK11543		321	gutQ D-arabinose 5-phosphate isomerase; Provisiona	96.75
cd04622		113	CBS_pair_9 The CBS domain, named after human CBS,	96.75
cd04595		110	CBS_pair_DHH_polyA_Pol_assoc This cd contains two	96.74
cd04800		111	CBS_pair_CAP-ED_DUF294_PBI_assoc2 This cd contains	96.73
cd04591		105	CBS_pair_EriC_assoc_euk_bac This cd contains two t	96.73
cd04586		135	CBS_pair_BON_assoc This cd contains two tandem rep	96.73
cd04588		110	CBS_pair_CAP-ED_DUF294_assoc_arch This cd contains	96.72
cd04605		110	CBS_pair_MET2_assoc This cd contains two tandem re	96.69
COG0517		117	FOG: CBS domain [General function prediction only]	96.69
PRK07807		479	inosine 5-monophosphate dehydrogenase; Validated	96.69
COG4109		432	Predicted transcriptional regulator containing CBS	96.68
PRK07107		502	inosine 5-monophosphate dehydrogenase; Validated	96.68
cd04589		111	CBS_pair_CAP-ED_DUF294_assoc_bac This cd contains	96.67
cd04612		111	CBS_pair_SpoIVFB_EriC_assoc This cd contains two t	96.66
cd04629		114	CBS_pair_16 The CBS domain, named after human CBS,	96.63
cd04599		105	CBS_pair_GGDEF_assoc2 This cd contains two tandem	96.63
cd04642		126	CBS_pair_29 The CBS domain, named after human CBS,	96.62
cd04636		132	CBS_pair_23 The CBS domain, named after human CBS,	96.61
TIGR01303		475	IMP_DH_rel_1 IMP dehydrogenase family protein. Thi	96.61
cd04643		116	CBS_pair_30 The CBS domain, named after human CBS,	96.6
cd04626		111	CBS_pair_13 The CBS domain, named after human CBS,	96.59
cd04633		121	CBS_pair_20 The CBS domain, named after human CBS,	96.58
cd04594		104	CBS_pair_EriC_assoc_archaea This cd contains two t	96.58
cd04801		114	CBS_pair_M50_like This cd contains two tandem repe	96.58
cd04640		126	CBS_pair_27 The CBS domain, named after human CBS,	96.57
PLN02274		505	inosine-5'-monophosphate dehydrogenase	96.57
COG2905		610	Predicted signal-transduction protein containing c	96.5
TIGR01137		454	cysta_beta cystathionine beta-synthase. Members of	96.49
cd04593		115	CBS_pair_EriC_assoc_bac_arch This cd contains two	96.48
cd04632		128	CBS_pair_19 The CBS domain, named after human CBS,	96.45
cd04637		122	CBS_pair_24 The CBS domain, named after human CBS,	96.43
cd04584		121	CBS_pair_ACT_assoc This cd contains two tandem rep	96.43
TIGR00393		268	kpsF KpsF/GutQ family protein. This model describe	96.41
cd04590		111	CBS_pair_CorC_HlyC_assoc This cd contains two tand	96.33
TIGR01302		450	IMP_dehydrog inosine-5'-monophosphate dehydrogenas	96.32
cd02205		113	CBS_pair The CBS domain, named after human CBS, is	96.22
PTZ00314		495	inosine-5'-monophosphate dehydrogenase; Provisiona	96.03
cd04598		119	CBS_pair_GGDEF_assoc This cd contains two tandem r	96.0
cd04609		110	CBS_pair_PALP_assoc2 This cd contains two tandem r	95.9
cd04638		106	CBS_pair_25 The CBS domain, named after human CBS,	95.81
TIGR03415		382	ABC_choXWV_ATP choline ABC transporter, ATP-bindin	95.79
cd04634		143	CBS_pair_21 The CBS domain, named after human CBS,	95.77
TIGR03520		408	GldE gliding motility-associated protein GldE. Mem	95.62
KOG0474		762	consensus Cl- channel CLC-7 and related proteins (	95.59
PRK15094		292	magnesium/cobalt efflux protein CorC; Provisional	95.3
COG2239		451	MgtE Mg/Co/Ni transporter MgtE (contains CBS domai	95.14
COG4175		386	ProV ABC-type proline/glycine betaine transport sy	95.04
TIGR01186		363	proV glycine betaine/L-proline transport ATP bindi	94.7
PRK10070		400	glycine betaine transporter ATP-binding subunit; P	92.75
KOG2550		503	consensus IMP dehydrogenase/GMP reductase [Nucleot	91.71
KOG2118		498	consensus Predicted membrane protein, contains two	90.52
PRK11573		413	hypothetical protein; Provisional	89.23
KOG0476		931	consensus Cl- channel CLC-2 and related proteins (	85.34
TIGR03415		382	ABC_choXWV_ATP choline ABC transporter, ATP-bindin	82.85
COG1253		429	TlyC Hemolysins and related proteins containing CB	81.12

>KOG0474 consensus Cl- channel CLC-7 and related proteins (CLC superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

Probab=100.00  E-value=3.1e-174  Score=1407.56  Aligned_cols=729  Identities=57%  Similarity=0.958  Sum_probs=693.4

Q ss_pred             CCCCCccccccccccCCCCchhhhhcCCCCCCCCCCcccchhhhhHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 003885           41 SEDHNLREPLLLKCRTNTTSQIAIVGANICPIESLDYEIVENELFKQDWRARRKVEIFQYVVFKWTLALLIGVLTGLAAV  120 (789)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~esldy~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~liGv~~Gl~a~  120 (789)
                      +++..+++|++.+.+++..+++++.++++++|||||||++||+.|+|+||+|++.+.++|.+.||+++++||+++|++|+
T Consensus        24 ~~s~~l~~~l~~~~~t~~~~d~~i~~~k~~~yESLDYei~ENdlf~e~~r~~~k~~~~~y~~~kW~~~~lIGi~TgLva~  103 (762)
T KOG0474|consen   24 RRSVALPEELTISGETQELDDLEILGAKVCDYESLDYEICENDLFLEDWRTRDKKKGRRYEAVKWMVCFLIGICTGLVAL  103 (762)
T ss_pred             ccccccccchhhcCCccccchhhhhcCCCCCccccchhhhcchHHHHHHHhhcccceeeeehHHHHHHHHHHHHHHHHHH
Confidence            34445899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhccc-----hhhHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHhCCCCCCc
Q 003885          121 FCNFFVENIAGFKLLLINNLMLNDR-----HFMGFVANTSINLGLAILAAILCAYIAPAAAGSGIPEVKAYLNGIDAHSI  195 (789)
Q Consensus       121 ~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~a~~l~~~~~p~a~GsGipev~~~lng~~~~~~  195 (789)
                      ++|.++|++.++|+..+.+.+.+.+     ++.+++.|..++++++++++.++.+++|.|+||||||||+||||+++|+.
T Consensus       104 fidl~Ven~ag~Kf~~v~~~v~~~~s~~g~~~~~~l~~~g~Nl~lv~~as~lv~~iaP~AAGSGIPevK~YLNGV~iP~i  183 (762)
T KOG0474|consen  104 FIDLFVENFAGLKFGVVQNSVEECRSQKGCLALSLLVLLGFNLVLVFLASVLVAYIAPVAAGSGIPEVKCYLNGVKIPGI  183 (762)
T ss_pred             HHHHHHHHhhchhHHHHHHHHHHhhhccccHHHHHHHHHHHhHHHHHHHHHHHHeechhccCCCCchhhhhhcCccCcce
Confidence            9999999999999999988877666     99999999999999999999999999999999999999999999999999


Q ss_pred             cchhhHHHHHHhhhhhhhccccccCchhHHHHHHHHHHHhhccCccccchhhhhhcccCChhhhhhHHHhhhhhhhhhhc
Q 003885          196 LAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDRRDLITCGAAAGVAGAF  275 (789)
Q Consensus       196 l~~~~l~~K~~~~i~sv~sG~svG~EGP~vhiGa~igs~l~~~~s~~~~l~~~~~~~f~~~~~~r~lv~~GaAAGvaaaF  275 (789)
                      +++||+++|++|++++|++|+.+||||||||.|||||+.++||+|.+++++|||+||||||+|||||++||+||||||||
T Consensus       184 vrl~TL~~Ki~Gvi~sV~gGL~~GKEGPMIHsGa~Vaagl~QG~S~~~r~~~r~fr~FrnDrdrRD~VscGaAAGVaAAF  263 (762)
T KOG0474|consen  184 VRLRTLIVKILGVIFSVAGGLAVGKEGPMIHSGSVVAAGLGQGGSTSLRKDWRWFRYFRNDRDRRDLVSCGAAAGVAAAF  263 (762)
T ss_pred             eehhhhHHhHhhhhhhhhhhhhccCcCCeeehhHHHHhcccCCCccchhhhhhhhhhhcccchhhhhhhcchHHhHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcchhhhHHHhHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCcccccCCCcceEEeccCCCCCcchhhHHHHHHH
Q 003885          276 RAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFIEFCRSGRCGLFGQGGLIMFDVNSAKNSYSSADLLAVIFL  355 (789)
Q Consensus       276 ~APigGvLFalE~~~~~~~~~~~~~~f~~~~va~~v~~~l~~~~~~~~~~~f~~~~~~~f~~~~~~~~~~~~~l~~~i~l  355 (789)
                      +||+||+||++||.++||++.++||+||++++++++++.++.+|.+|+|+.|+.+++++|++.+....|+.+|+++++++
T Consensus       264 ~APvGGvLFaLEE~aS~Wnq~L~WR~fFss~i~~f~l~~~i~~~~~G~~g~f~~~GLi~f~vf~~~~~y~~~el~~f~~i  343 (762)
T KOG0474|consen  264 RAPVGGVLFALEEGASWWNQALLWRTFFSSAIVAFVLRAFILSCLSGKCGLFGKGGLINFDVFDGPVDYHIHELPPFLLI  343 (762)
T ss_pred             CCCccceEEEechhhHHHHhhHHHHHHHHhHHHHHhHHHHHHHHhcCchhccCCcceEEecccCCccccccccccceeEe
Confidence            99999999999999999999999999999999999999999999999999999999999999977779999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhcCchhHHHHHHHHHHHhhhhhcccccccccCCCCCCcccCCCCCCCCCCCccc
Q 003885          356 GVIGGIFGSFYNYLVDKVLRTYSIINERGPIFKVLLVAAVSLLTSCCSYGLPWLSHCIPCPSYLEADRCPTVGRSGNYKN  435 (789)
Q Consensus       356 Gv~~Gl~g~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~c~~~~~~~~~~~~p~~g~~g~~~~  435 (789)
                      ||+||++|++||++|.+...++.+ +.|.+..|++++++++++|++++|.+|++.+|+|||++.....||+         
T Consensus       344 GViGGlLGalfN~Ln~~~~~~r~~-~~k~k~~kvlea~~Vs~~ts~~af~l~~l~~C~P~~~~~~~~~~p~---------  413 (762)
T KOG0474|consen  344 GVIGGLLGALFNYLNLKKVLRRYN-YEKGKIGKVLEALLVSLVTSVLAFGLPFLADCQPCPPSITEGQCPT---------  413 (762)
T ss_pred             ehhhhhHHHHHHHHHHHHHHHHHh-ccCchHHHHHHHHHHHHHHHHHHhhhHHHhcCCCCCCCcccccCcc---------
Confidence            999999999999998777766655 6678889999999999999999999999999999998865446774         


Q ss_pred             cccCCCcchhhhhhhccCchHHHHhhhcCCCCccchHHHHHHHHHHHHHHHHHHhcCcCCcccchHHHHHHHHHHHHHHH
Q 003885          436 FQCPAGHYNDLASLFLNTNDDAIRNLFSSGTSKEFHLSTLLVFFVAIYCLGIITYGIAVPSGLFIPVILAGASYGRLVGN  515 (789)
Q Consensus       436 ~~c~~g~y~~la~l~~~~~~~~i~~lf~~~~~~~~~~~~L~~~~~~k~~lt~~t~g~g~~gG~f~P~l~iGa~~G~l~g~  515 (789)
                      |+||+|+||++|+|+|+|+||+|+++||+++ ++|++.+|++|++.+|+++++|||+.+|+|+|+|++++||+|||++|+
T Consensus       414 f~Cp~~~YNdlAtL~fnt~ddaVrnLFh~~~-~ef~~~tL~iFfv~yf~L~~~TfGi~vpsGlFiP~iL~GAa~GRlvg~  492 (762)
T KOG0474|consen  414 FFCPDGEYNDLATLFFNTNDDAVRNLFHSPT-NEFGILTLAIFFVLYFFLACWTFGIAVPSGLFIPVILTGAAYGRLVGM  492 (762)
T ss_pred             ccCCCCchhHHHHHHcCCcHHHHHHHhcCCC-CccchhHHHHHHHHHHHHHHHHhcccccccchhHHHHhhHHHHHHHHH
Confidence            8999999999999999999999999999987 999999999999999999999999999999999999999999999999


Q ss_pred             HhhhccCcchHHHHHHHHHhhhhhhchhhHHHHhHHHhhcCCCccHHHHHHHHHHHHHHHHhhCchhHHHHHHHcCCCcc
Q 003885          516 LLGALSDLDTGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVADSFNQGVYDQIVKLKGLPYL  595 (789)
Q Consensus       516 ~~~~~~~~~~~~~alvGaaA~l~g~~r~pis~~vi~~ElTg~~~~l~pimia~~ia~~v~~~~~~~iy~~~l~~kg~p~l  595 (789)
                      ++....++|||.||++||||+|||++|||+|+|||++|+|+ ..+++|+|+++++||||+|.||++|||.++++||+|+|
T Consensus       493 ~l~~~~~id~G~yAllGAAa~LGG~mRMTvSL~VIl~E~Tn-~~~~lPiMlvLliaK~VGD~FNegiYd~~i~LkgvP~L  571 (762)
T KOG0474|consen  493 LLGSYTNIDPGLYALLGAAAFLGGVMRMTVSLCVILLELTN-NLLLLPIMLVLLIAKTVGDSFNEGIYDIIIQLKGVPFL  571 (762)
T ss_pred             HHHHhhccCchHHHHHhHHHHhCCeEEEEeeeehHHHHhhh-hhhhhHHHHHHHHHHHHHhhhhhhhHHHhhhccCCccc
Confidence            99998899999999999999999999999999999999994 57788889999999999999999999999999999999


Q ss_pred             cccccccccccceeecccCCeEEecCCCcHHHHHHHHhhcCCCeeEEeeCCCCCCCCeEEEEEehHHHHHHHhcCccccc
Q 003885          596 EAHAEPYMKNLVASDVVSGPLITFSGVEKVGNIMHALRLTRHNGFPVIDEPPLTPAPELCGLVLRSHLLVLLKGKKFTKQ  675 (789)
Q Consensus       596 ~~~~~~~l~~l~v~dvM~~~vvtv~~~~~V~~~~~~L~~~~~~~fPVVd~~~~~~~~~l~GlI~r~dLl~lL~~~~~~~~  675 (789)
                      +++++++|++++|+|+|++|+++++..++|+.++++|+++.||+|||||+.+.++.++++|+|.|+||+++|++++|.++
T Consensus       572 e~~pe~~mr~L~a~ev~~~pvi~l~~~ekV~~Iv~vLk~t~HngFPVvd~~~~~~~~~l~GlILRshl~vlL~~~~f~~~  651 (762)
T KOG0474|consen  572 EWEPEPYMRNLTAGEVMSKPVICLNRVEKVAVIVDVLKSTNHNGFPVVDEPPSNEAGRLHGLILRSHLLVLLKKRVFVEE  651 (762)
T ss_pred             cCCCchHhhhhhHhhhccCCeEEEechhhHHHHHHHHHhcCcCCCccccCCCCccchhhhHHHHHHHHHHHHHhhhhhcc
Confidence            99999999999999999999999999999999999999999999999999876677899999999999999999998755


Q ss_pred             ccc-CCcccccccchhhhccccCCCCCcccccccchhhhhhcccccccccCCCeeecCCCCHHHHHHHHHHcCCCeEEEe
Q 003885          676 KTM-TGSDIMRRFKAHDFAKAGSGKGVKLEDLDIKEEEMEMFVDLHPITNTSPYTVVETMSLAKAAVLFRQLALRHLCVV  754 (789)
Q Consensus       676 ~~~-~~~~~~~~~~~~d~~~~~~~~~~~i~di~l~~~~~~~~~dL~~im~~~p~tV~~~~sL~~a~~lf~~~glr~LpVV  754 (789)
                      ..+ .+....+.++.+|+++    +.++++|+.++++|+++++|++|+||++||+|+++||+.+++.+||+.|+||+.||
T Consensus       652 ~~~~~~~~~~~~~~~~d~a~----r~~~i~dv~lt~~e~~~yvDl~p~~n~sPytV~~~mSl~k~~~lFR~lGLRhLlVv  727 (762)
T KOG0474|consen  652 SRSTFDLPVRRKFTFRDFAK----REPSIEDVHLTSEEMEMYVDLHPFMNPSPYTVPETMSLAKAFILFRQLGLRHLLVV  727 (762)
T ss_pred             CccccCcchhhcCCHHHhhh----cCCchhhhhcchHhHhhccccccccCCCCcccCcccchHHHHHHHHHhcceeEEEe
Confidence            433 3333456788888886    56699999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCCCCEEEEEecccCcchhhhccCccccccC
Q 003885          755 PKTPGRPPIVGILTRHDFMPEHVLGLYPHIVNRH  788 (789)
Q Consensus       755 d~~~~~~~vvGIITr~DLl~~~~~~~~~~l~~~~  788 (789)
                      ++   .++++||+||+|+++++..+++|++.+.+
T Consensus       728 ~~---~~~~~gilTR~D~~~~~~l~~~~~v~~~~  758 (762)
T KOG0474|consen  728 PK---TNRVVGILTRKDLARYRILGLEPHVDELK  758 (762)
T ss_pred             cC---CCceeEEEehhhhhhHHHhcccccccccc
Confidence            98   78899999999999999999999998765

>KOG0475 consensus Cl- channel CLC-3 and related proteins (CLC superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

>KOG0476 consensus Cl- channel CLC-2 and related proteins (CLC superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

>cd03685 ClC_6_like ClC-6-like chloride channel proteins	Back alignment and domain information

>PRK01862 putative voltage-gated ClC-type chloride channel ClcB; Provisional	Back alignment and domain information

>cd03684 ClC_3_like ClC-3-like chloride channel proteins	Back alignment and domain information

>cd03683 ClC_1_like ClC-1-like chloride channel proteins	Back alignment and domain information

>cd01036 ClC_euk Chloride channel, ClC	Back alignment and domain information

>cd01031 EriC ClC chloride channel EriC	Back alignment and domain information

>PRK01610 putative voltage-gated ClC-type chloride channel ClcB; Provisional	Back alignment and domain information

>PRK05277 chloride channel protein; Provisional	Back alignment and domain information

>cd01034 EriC_like ClC chloride channel family	Back alignment and domain information

>cd01033 ClC_like Putative ClC chloride channel	Back alignment and domain information

>PF00654 Voltage_CLC: Voltage gated chloride channel Mutation in several of these channels lead to human disease	Back alignment and domain information

>COG0038 EriC Chloride channel protein EriC [Inorganic ion transport and metabolism]	Back alignment and domain information

>cd00400 Voltage_gated_ClC CLC voltage-gated chloride channel	Back alignment and domain information

>cd03682 ClC_sycA_like ClC sycA-like chloride channel proteins	Back alignment and domain information

>PRK03655 putative ion channel protein; Provisional	Back alignment and domain information

>cd01034 EriC_like ClC chloride channel family	Back alignment and domain information

>cd01033 ClC_like Putative ClC chloride channel	Back alignment and domain information

>PRK05277 chloride channel protein; Provisional	Back alignment and domain information

>COG3448 CBS-domain-containing membrane protein [Signal transduction mechanisms]	Back alignment and domain information

>COG2524 Predicted transcriptional regulator, contains C-terminal CBS domains [Transcription]	Back alignment and domain information

>cd00400 Voltage_gated_ClC CLC voltage-gated chloride channel	Back alignment and domain information

>PRK10892 D-arabinose 5-phosphate isomerase; Provisional	Back alignment and domain information

>PRK11543 gutQ D-arabinose 5-phosphate isomerase; Provisional	Back alignment and domain information

>PRK01862 putative voltage-gated ClC-type chloride channel ClcB; Provisional	Back alignment and domain information

>PRK01610 putative voltage-gated ClC-type chloride channel ClcB; Provisional	Back alignment and domain information

>cd04641 CBS_pair_28 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd03682 ClC_sycA_like ClC sycA-like chloride channel proteins	Back alignment and domain information

>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]	Back alignment and domain information

>cd01031 EriC ClC chloride channel EriC	Back alignment and domain information

>COG3620 Predicted transcriptional regulator with C-terminal CBS domains [Transcription]	Back alignment and domain information

>cd04619 CBS_pair_6 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>PRK07807 inosine 5-monophosphate dehydrogenase; Validated	Back alignment and domain information

>cd04603 CBS_pair_KefB_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the KefB (Kef-type K+ transport systems) domain which is involved in inorganic ion transport and metabolism	Back alignment and domain information

>cd04618 CBS_pair_5 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04600 CBS_pair_HPP_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the HPP motif domain	Back alignment and domain information

>TIGR03520 GldE gliding motility-associated protein GldE	Back alignment and domain information

>cd04617 CBS_pair_4 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04593 CBS_pair_EriC_assoc_bac_arch This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in bacteria and archaea	Back alignment and domain information

>PRK15094 magnesium/cobalt efflux protein CorC; Provisional	Back alignment and domain information

>cd04596 CBS_pair_DRTGG_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a DRTGG domain upstream	Back alignment and domain information

>cd04605 CBS_pair_MET2_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the MET2 domain	Back alignment and domain information

>cd04608 CBS_pair_PALP_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the pyridoxal-phosphate (PALP) dependent enzyme domain upstream	Back alignment and domain information

>cd04639 CBS_pair_26 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04586 CBS_pair_BON_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain	Back alignment and domain information

>cd04803 CBS_pair_15 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04583 CBS_pair_ABC_OpuCA_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the ABC transporter OpuCA	Back alignment and domain information

>cd04801 CBS_pair_M50_like This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the metalloprotease peptidase M50	Back alignment and domain information

>cd04624 CBS_pair_11 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04607 CBS_pair_NTP_transferase_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain associated with the NTP (Nucleotidyl transferase) domain downstream	Back alignment and domain information

>cd04623 CBS_pair_10 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04582 CBS_pair_ABC_OpuCA_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the ABC transporter OpuCA	Back alignment and domain information

>cd04595 CBS_pair_DHH_polyA_Pol_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with an upstream DHH domain which performs a phosphoesterase function and a downstream polyA polymerase domain	Back alignment and domain information

>cd04614 CBS_pair_1 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04635 CBS_pair_22 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04613 CBS_pair_SpoIVFB_EriC_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with either the SpoIVFB domain (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) or the chloride channel protein EriC	Back alignment and domain information

>cd04629 CBS_pair_16 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04615 CBS_pair_2 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04631 CBS_pair_18 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04630 CBS_pair_17 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04627 CBS_pair_14 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04636 CBS_pair_23 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>PRK07107 inosine 5-monophosphate dehydrogenase; Validated	Back alignment and domain information

>cd04620 CBS_pair_7 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>TIGR01137 cysta_beta cystathionine beta-synthase	Back alignment and domain information

>cd04604 CBS_pair_KpsF_GutQ_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with KpsF/GutQ domains in the API [A5P (D-arabinose 5-phosphate) isomerase] protein	Back alignment and domain information

>cd04626 CBS_pair_13 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04588 CBS_pair_CAP-ED_DUF294_assoc_arch This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the archaeal CAP_ED (cAMP receptor protein effector domain) family of transcription factors and the DUF294 domain	Back alignment and domain information

>cd04602 CBS_pair_IMPDH_2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the inosine 5' monophosphate dehydrogenase (IMPDH) protein	Back alignment and domain information

>cd04632 CBS_pair_19 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04622 CBS_pair_9 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04591 CBS_pair_EriC_assoc_euk_bac This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in eukaryotes and bacteria	Back alignment and domain information

>cd04587 CBS_pair_CAP-ED_DUF294_PBI_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with either the CAP_ED (cAMP receptor protein effector domain) family of transcription factors and the DUF294 domain or the PB1 (Phox and Bem1p) domain	Back alignment and domain information

>cd04642 CBS_pair_29 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04599 CBS_pair_GGDEF_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain	Back alignment and domain information

>cd04601 CBS_pair_IMPDH This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the inosine 5' monophosphate dehydrogenase (IMPDH) protein	Back alignment and domain information

>cd04637 CBS_pair_24 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04643 CBS_pair_30 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04611 CBS_pair_PAS_GGDEF_DUF1_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with a PAS domain, a GGDEF (DiGuanylate-Cyclase (DGC) domain, and a DUF1 domain downstream	Back alignment and domain information

>cd04585 CBS_pair_ACT_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the acetoin utilization proteins in bacteria	Back alignment and domain information

>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional	Back alignment and domain information

>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase	Back alignment and domain information

>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein	Back alignment and domain information

>cd04800 CBS_pair_CAP-ED_DUF294_PBI_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with either the CAP_ED (cAMP receptor protein effector domain) family of transcription factors and the DUF294 domain or the PB1 (Phox and Bem1p) domain	Back alignment and domain information

>TIGR00400 mgtE Mg2+ transporter (mgtE)	Back alignment and domain information

>cd04621 CBS_pair_8 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>PRK14869 putative manganese-dependent inorganic pyrophosphatase; Provisional	Back alignment and domain information

>cd04612 CBS_pair_SpoIVFB_EriC_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with either the SpoIVFB domain (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) or the chloride channel protein EriC	Back alignment and domain information

>cd04640 CBS_pair_27 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04802 CBS_pair_3 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04590 CBS_pair_CorC_HlyC_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the CorC_HlyC domain	Back alignment and domain information

>cd04589 CBS_pair_CAP-ED_DUF294_assoc_bac This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the bacterial CAP_ED (cAMP receptor protein effector domain) family of transcription factors and the DUF294 domain	Back alignment and domain information

>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed	Back alignment and domain information

>cd02205 CBS_pair The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04609 CBS_pair_PALP_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the pyridoxal-phosphate (PALP) dependent enzyme domain upstream	Back alignment and domain information

>cd04610 CBS_pair_ParBc_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a ParBc (ParB-like nuclease) domain downstream	Back alignment and domain information

>cd04625 CBS_pair_12 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>PF00654 Voltage_CLC: Voltage gated chloride channel Mutation in several of these channels lead to human disease	Back alignment and domain information

>COG0517 FOG: CBS domain [General function prediction only]	Back alignment and domain information

>TIGR00393 kpsF KpsF/GutQ family protein	Back alignment and domain information

>cd04606 CBS_pair_Mg_transporter This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain in the magnesium transporter, MgtE	Back alignment and domain information

>cd04594 CBS_pair_EriC_assoc_archaea This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the EriC CIC-type chloride channels in archaea	Back alignment and domain information

>PLN02274 inosine-5'-monophosphate dehydrogenase	Back alignment and domain information

>cd04584 CBS_pair_ACT_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the acetoin utilization proteins in bacteria	Back alignment and domain information

>cd04633 CBS_pair_20 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>COG0038 EriC Chloride channel protein EriC [Inorganic ion transport and metabolism]	Back alignment and domain information

>PRK11573 hypothetical protein; Provisional	Back alignment and domain information

>cd04598 CBS_pair_GGDEF_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain	Back alignment and domain information

>PRK03655 putative ion channel protein; Provisional	Back alignment and domain information

>cd04634 CBS_pair_21 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04638 CBS_pair_25 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd03684 ClC_3_like ClC-3-like chloride channel proteins	Back alignment and domain information

>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	Back alignment and domain information

>COG1253 TlyC Hemolysins and related proteins containing CBS domains [General function prediction only]	Back alignment and domain information

>cd04592 CBS_pair_EriC_assoc_euk This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in eukaryotes	Back alignment and domain information

>cd03685 ClC_6_like ClC-6-like chloride channel proteins	Back alignment and domain information

>COG2239 MgtE Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	Back alignment and domain information

>COG4536 CorB Putative Mg2+ and Co2+ transporter CorB [Inorganic ion transport and metabolism]	Back alignment and domain information

>cd01036 ClC_euk Chloride channel, ClC	Back alignment and domain information

>PF00571 CBS: CBS domain CBS domain web page	Back alignment and domain information

>cd03683 ClC_1_like ClC-1-like chloride channel proteins	Back alignment and domain information

>PF00571 CBS: CBS domain CBS domain web page	Back alignment and domain information

>COG4535 CorC Putative Mg2+ and Co2+ transporter CorC [Inorganic ion transport and metabolism]	Back alignment and domain information

>KOG2550 consensus IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]	Back alignment and domain information

>KOG1764 consensus 5'-AMP-activated protein kinase, gamma subunit [Energy production and conversion]	Back alignment and domain information

>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit	Back alignment and domain information

>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional	Back alignment and domain information

>COG3448 CBS-domain-containing membrane protein [Signal transduction mechanisms]	Back alignment and domain information

>PRK14869 putative manganese-dependent inorganic pyrophosphatase; Provisional	Back alignment and domain information

>cd04597 CBS_pair_DRTGG_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a DRTGG domain upstream	Back alignment and domain information

>TIGR00400 mgtE Mg2+ transporter (mgtE)	Back alignment and domain information

>cd04597 CBS_pair_DRTGG_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a DRTGG domain upstream	Back alignment and domain information

>cd04603 CBS_pair_KefB_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the KefB (Kef-type K+ transport systems) domain which is involved in inorganic ion transport and metabolism	Back alignment and domain information

>COG2524 Predicted transcriptional regulator, contains C-terminal CBS domains [Transcription]	Back alignment and domain information

>cd04619 CBS_pair_6 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>COG3620 Predicted transcriptional regulator with C-terminal CBS domains [Transcription]	Back alignment and domain information

>cd04618 CBS_pair_5 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04641 CBS_pair_28 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04600 CBS_pair_HPP_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the HPP motif domain	Back alignment and domain information

>cd04606 CBS_pair_Mg_transporter This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain in the magnesium transporter, MgtE	Back alignment and domain information

>cd04607 CBS_pair_NTP_transferase_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain associated with the NTP (Nucleotidyl transferase) domain downstream	Back alignment and domain information

>cd04614 CBS_pair_1 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04627 CBS_pair_14 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04585 CBS_pair_ACT_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the acetoin utilization proteins in bacteria	Back alignment and domain information

>cd04620 CBS_pair_7 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04592 CBS_pair_EriC_assoc_euk This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in eukaryotes	Back alignment and domain information

>smart00116 CBS Domain in cystathionine beta-synthase and other proteins	Back alignment and domain information

>cd04615 CBS_pair_2 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04625 CBS_pair_12 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed	Back alignment and domain information

>cd04617 CBS_pair_4 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04596 CBS_pair_DRTGG_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a DRTGG domain upstream	Back alignment and domain information

>cd04608 CBS_pair_PALP_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the pyridoxal-phosphate (PALP) dependent enzyme domain upstream	Back alignment and domain information

>cd04621 CBS_pair_8 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>KOG0475 consensus Cl- channel CLC-3 and related proteins (CLC superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

>cd04630 CBS_pair_17 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>smart00116 CBS Domain in cystathionine beta-synthase and other proteins	Back alignment and domain information

>cd04604 CBS_pair_KpsF_GutQ_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with KpsF/GutQ domains in the API [A5P (D-arabinose 5-phosphate) isomerase] protein	Back alignment and domain information

>cd04803 CBS_pair_15 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04610 CBS_pair_ParBc_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a ParBc (ParB-like nuclease) domain downstream	Back alignment and domain information

>cd04587 CBS_pair_CAP-ED_DUF294_PBI_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with either the CAP_ED (cAMP receptor protein effector domain) family of transcription factors and the DUF294 domain or the PB1 (Phox and Bem1p) domain	Back alignment and domain information

>cd04611 CBS_pair_PAS_GGDEF_DUF1_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with a PAS domain, a GGDEF (DiGuanylate-Cyclase (DGC) domain, and a DUF1 domain downstream	Back alignment and domain information

>KOG1764 consensus 5'-AMP-activated protein kinase, gamma subunit [Energy production and conversion]	Back alignment and domain information

>cd04635 CBS_pair_22 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04639 CBS_pair_26 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>PRK10892 D-arabinose 5-phosphate isomerase; Provisional	Back alignment and domain information

>cd04613 CBS_pair_SpoIVFB_EriC_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with either the SpoIVFB domain (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) or the chloride channel protein EriC	Back alignment and domain information

>cd04602 CBS_pair_IMPDH_2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the inosine 5' monophosphate dehydrogenase (IMPDH) protein	Back alignment and domain information

>cd04582 CBS_pair_ABC_OpuCA_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the ABC transporter OpuCA	Back alignment and domain information

>cd04583 CBS_pair_ABC_OpuCA_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the ABC transporter OpuCA	Back alignment and domain information

>cd04631 CBS_pair_18 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04802 CBS_pair_3 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04623 CBS_pair_10 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04601 CBS_pair_IMPDH This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the inosine 5' monophosphate dehydrogenase (IMPDH) protein	Back alignment and domain information

>cd04624 CBS_pair_11 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>PRK11543 gutQ D-arabinose 5-phosphate isomerase; Provisional	Back alignment and domain information

>cd04622 CBS_pair_9 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04595 CBS_pair_DHH_polyA_Pol_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with an upstream DHH domain which performs a phosphoesterase function and a downstream polyA polymerase domain	Back alignment and domain information

>cd04800 CBS_pair_CAP-ED_DUF294_PBI_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with either the CAP_ED (cAMP receptor protein effector domain) family of transcription factors and the DUF294 domain or the PB1 (Phox and Bem1p) domain	Back alignment and domain information

>cd04591 CBS_pair_EriC_assoc_euk_bac This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in eukaryotes and bacteria	Back alignment and domain information

>cd04586 CBS_pair_BON_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain	Back alignment and domain information

>cd04588 CBS_pair_CAP-ED_DUF294_assoc_arch This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the archaeal CAP_ED (cAMP receptor protein effector domain) family of transcription factors and the DUF294 domain	Back alignment and domain information

>cd04605 CBS_pair_MET2_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the MET2 domain	Back alignment and domain information

>COG0517 FOG: CBS domain [General function prediction only]	Back alignment and domain information

>PRK07807 inosine 5-monophosphate dehydrogenase; Validated	Back alignment and domain information

>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]	Back alignment and domain information

>PRK07107 inosine 5-monophosphate dehydrogenase; Validated	Back alignment and domain information

>cd04589 CBS_pair_CAP-ED_DUF294_assoc_bac This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the bacterial CAP_ED (cAMP receptor protein effector domain) family of transcription factors and the DUF294 domain	Back alignment and domain information

>cd04612 CBS_pair_SpoIVFB_EriC_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with either the SpoIVFB domain (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) or the chloride channel protein EriC	Back alignment and domain information

>cd04629 CBS_pair_16 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04599 CBS_pair_GGDEF_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain	Back alignment and domain information

>cd04642 CBS_pair_29 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04636 CBS_pair_23 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein	Back alignment and domain information

>cd04643 CBS_pair_30 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04626 CBS_pair_13 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04633 CBS_pair_20 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04594 CBS_pair_EriC_assoc_archaea This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the EriC CIC-type chloride channels in archaea	Back alignment and domain information

>cd04801 CBS_pair_M50_like This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the metalloprotease peptidase M50	Back alignment and domain information

>cd04640 CBS_pair_27 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>PLN02274 inosine-5'-monophosphate dehydrogenase	Back alignment and domain information

>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	Back alignment and domain information

>TIGR01137 cysta_beta cystathionine beta-synthase	Back alignment and domain information

>cd04593 CBS_pair_EriC_assoc_bac_arch This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in bacteria and archaea	Back alignment and domain information

>cd04632 CBS_pair_19 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04637 CBS_pair_24 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>cd04584 CBS_pair_ACT_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the acetoin utilization proteins in bacteria	Back alignment and domain information

>TIGR00393 kpsF KpsF/GutQ family protein	Back alignment and domain information

>cd04590 CBS_pair_CorC_HlyC_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the CorC_HlyC domain	Back alignment and domain information

>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase	Back alignment and domain information

>cd02205 CBS_pair The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional	Back alignment and domain information

>cd04598 CBS_pair_GGDEF_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain	Back alignment and domain information

>cd04609 CBS_pair_PALP_assoc2 This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the pyridoxal-phosphate (PALP) dependent enzyme domain upstream	Back alignment and domain information

>cd04638 CBS_pair_25 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein	Back alignment and domain information

>cd04634 CBS_pair_21 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins	Back alignment and domain information

>TIGR03520 GldE gliding motility-associated protein GldE	Back alignment and domain information

>KOG0474 consensus Cl- channel CLC-7 and related proteins (CLC superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

>PRK15094 magnesium/cobalt efflux protein CorC; Provisional	Back alignment and domain information

>COG2239 MgtE Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism]	Back alignment and domain information

>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]	Back alignment and domain information

>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit	Back alignment and domain information

>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional	Back alignment and domain information

>KOG2550 consensus IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]	Back alignment and domain information

>KOG2118 consensus Predicted membrane protein, contains two CBS domains [Function unknown]	Back alignment and domain information

>PRK11573 hypothetical protein; Provisional	Back alignment and domain information

>KOG0476 consensus Cl- channel CLC-2 and related proteins (CLC superfamily) [Inorganic ion transport and metabolism]	Back alignment and domain information

>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein	Back alignment and domain information

>COG1253 TlyC Hemolysins and related proteins containing CBS domains [General function prediction only]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		789
3org_A		632	Crystal Structure Of A Eukaryotic Clc Transporter L		3e-04

>pdb|3ORG|A Chain A, Crystal Structure Of A Eukaryotic Clc Transporter Length = 632

Back alignment and structure

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 177 GSGIPEVKAYLNGI--DAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANL 234
           GSG+P++K+ L+G      S L    LF K  G I  +  G  VG EGP VH    IA+ 
Sbjct: 79  GSGLPQMKSILSGFYDKMRSALELRVLFAKALGLICAIGGGLPVGWEGPNVHIACIIAHQ 138
Query: 235 LGQGGSKKYHLTWRWLR 251
             + G  K   T R LR
Sbjct: 139 FYRLGVFKELCTDRALR 155

PyMOL of 3org

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		789
3org_A		632	CMCLC; transporter, transport protein; 3.50A {Cyan	1e-172
1ots_A		465	Voltage-gated CLC-type chloride channel ERIC; CLC	2e-61
3nd0_A		466	SLL0855 protein; CLC family CL-/H+ antiporter, CLC	7e-58
2j9l_A		185	Chloride channel protein 5; ION channel, ION trans	5e-29
2pfi_A		164	Chloride channel protein CLC-Ka; cystathionine bet	3e-10
1o50_A		157	CBS domain-containing predicted protein TM0935; CB	5e-09
3sl7_A		180	CBS domain-containing protein CBSX2; CBS-PAIR prot	7e-08
2d4z_A		250	Chloride channel protein; CLC chloride channel cyt	9e-08
2d4z_A		250	Chloride channel protein; CLC chloride channel cyt	8e-04
3ctu_A		156	CBS domain protein; structural genomics, PSI-2, pr	6e-06
1pbj_A		125	Hypothetical protein; structural genomics, domain,	9e-06
3kh5_A		280	Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, a	1e-05
3kh5_A		280	Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, a	1e-04
2emq_A		157	Hypothetical conserved protein; CBS domains, NPPSF	2e-05
1y5h_A		133	Hypothetical protein RV2626C; CBS domain, unknown	2e-05
2yzi_A		138	Hypothetical protein PH0107; sheet/helix/sheet/she	2e-05
3ddj_A		296	CBS domain-containing protein; structural genomics	3e-05
3ddj_A		296	CBS domain-containing protein; structural genomics	1e-04
1pvm_A		184	Conserved hypothetical protein TA0289; structural	5e-05
2o16_A		160	Acetoin utilization protein ACUB, putative; struct	5e-05
2rih_A		141	Conserved protein with 2 CBS domains; bateman doma	5e-05
3lqn_A		150	CBS domain protein; csgid, structural genomics, un	7e-05
2p9m_A		138	Hypothetical protein MJ0922; structural genomics,	8e-05
1yav_A		159	Hypothetical protein BSU14130; cystathionine beta	3e-04
3fv6_A		159	YQZB protein; CBS domain dimer, metabolism regulat	4e-04

>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae} Length = 632	Back alignment and structure

 Score =  508 bits (1310), Expect = e-172
 Identities = 147/694 (21%), Positives = 262/694 (37%), Gaps = 87/694 (12%)

Query: 97  IFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSI 156
              Y++       L+GV   L     +  V  +   ++ +          F G++     
Sbjct: 3   SLMYLLRLVCFLTLLGVTAALFIFAVDLAVHGLEELRMKISRLA----GRFAGYILYVVS 58

Query: 157 NLGLAILAAILCAYIAPAAAGSGIPEVKAYLNGI--DAHSILAPSTLFVKIFGSIFGVAA 214
            + L +L+   CA ++  A GSG+P++K+ L+G      S L    LF K  G I  +  
Sbjct: 59  GVALCLLSTFWCAVLSTEAEGSGLPQMKSILSGFYDKMRSALELRVLFAKALGLICAIGG 118

Query: 215 GFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDRRDLITCGAAAGVAGA 274
           G  VG EGP VH    IA+   + G         +     +   R   +    A G+A +
Sbjct: 119 GLPVGWEGPNVHIACIIAHQFYRLG--------VFKELCTDRALRLQTLAAACAVGLASS 170

Query: 275 FRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFIEFCRSGRCGLFGQGGLIM 334
           F AP+GGVL+++E  AS++     W+   +    A+V               +    +  
Sbjct: 171 FGAPLGGVLYSIETIASFYLVQAFWKGVLSALSGAIVYELL-----------YTTPLVEA 219

Query: 335 FDV-NSAKNSYSSADLLAVIFLGVIGGIFGSFYNYLVDKVLRTYSIINERGPIFKVLLVA 393
           F+  N   +  S    L    LG + G+ G+ +   V  +      +       +  LV 
Sbjct: 220 FEGTNFDASDVSRTQTLLYAILGALMGVLGALFIRCVRSIYELR--MRHYPGTNRYFLVG 277

Query: 394 AVSLLTSCCSYGLPWLSHCIPCPSYLEADRCPTVGRSGNYKNFQCPAGHYNDLASLFLNT 453
            V+L  S   Y                                  P    NDL       
Sbjct: 278 VVALFASALQYPFRLF--------------------------ALDPRATINDLFKAVPLY 311

Query: 454 NDDAIRNLFSSGTSKEFHLSTLLVFFVAIYCLGIITYGIAVPSGLFIPVILAGASYGRLV 513
             D             F  + L++  +  + L  ++ G+ +P+G+F+P  L GA +GRL 
Sbjct: 312 QTD------------HFGWTELILMPIIKFILVALSIGLPLPAGVFVPSFLIGAGFGRLY 359

Query: 514 GNLLGAL--SDLDTGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLIS 571
           G L+  +  + +  G +A++GAA+F  G  R  +S  VI+ E+T  +  L  V++ +L++
Sbjct: 360 GELMRVVFGNAIVPGSYAVVGAAAFTAGVTR-ALSCAVIIFEVTGQIRHLVPVLISVLLA 418

Query: 572 KTVADSFNQGVYDQIVKLKGLPYLEAHAEPYMKNLVASDVVSG--PLITFSGVEKVGNIM 629
             V ++FN+ +Y+ +V +K LPY+          + A +++             +  +I 
Sbjct: 419 VIVGNAFNRSLYETLVLMKHLPYMPILRRDRSPEMTAREIMHPIEGEPHLFPDSEPQHIK 478

Query: 630 HAL-RLTRHNGFPVIDEPPLTPAPELCGLVLRSHLLVLLKGKKFTKQKTMTGSDIMRRFK 688
             L +      FPVID         L G + R  ++  L+       + + G   +    
Sbjct: 479 GILEKFPNRLVFPVIDAN-----GYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLLD 533

Query: 689 AHDFAKAGSGKGVKLEDLD------IKEEEMEMFVDLHPITNTSPYTVVETMSLAKAAVL 742
           A D ++   G   +    +           +E    L    + SP  V     + +   L
Sbjct: 534 AADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFL 593

Query: 743 FRQLALRHLCVVPKTPGRPPIVGILTRHDFMPEH 776
           F  L    + V  +  G+  +VGI+ R D    +
Sbjct: 594 FVMLMPSMIYVTER--GK--LVGIVEREDVAYGY 623

PyMOL of 3org

>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ... Length = 465	Back alignment and structure

>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A Length = 466	Back alignment and structure

>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A* Length = 185	Back alignment and structure

>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens} Length = 164	Back alignment and structure

>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1 Length = 157	Back alignment and structure

>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana} Length = 180	Back alignment and structure

>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1 Length = 250	Back alignment and structure

>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1 Length = 250	Back alignment and structure

>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1 Length = 125	Back alignment and structure

>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A* Length = 280	Back alignment and structure

>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A* Length = 280	Back alignment and structure

>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus} Length = 157	Back alignment and structure

>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A Length = 133	Back alignment and structure

>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1 Length = 138	Back alignment and structure

>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1 Length = 296	Back alignment and structure

>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1 Length = 296	Back alignment and structure

>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A Length = 184	Back alignment and structure

>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1 Length = 160	Back alignment and structure

>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A Length = 141	Back alignment and structure

>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} Length = 150	Back alignment and structure

>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} Length = 138	Back alignment and structure

>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1 Length = 159	Back alignment and structure

>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A* Length = 159	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		789
3org_A		632	CMCLC; transporter, transport protein; 3.50A {Cyan	100.0
3nd0_A		466	SLL0855 protein; CLC family CL-/H+ antiporter, CLC	100.0
1ots_A		465	Voltage-gated CLC-type chloride channel ERIC; CLC	100.0
4ene_A		446	CLC-EC1, H(+)/CL(-) exchange transporter CLCA; mem	100.0
2d4z_A		250	Chloride channel protein; CLC chloride channel cyt	99.84
4esy_A		170	CBS domain containing membrane protein; structural	99.74
3lv9_A		148	Putative transporter; CBS domain, PSI, MCSG, struc	99.68
3hf7_A		130	Uncharacterized CBS-domain protein; CSB-domain PAI	99.67
3kpb_A		122	Uncharacterized protein MJ0100; CBS domain, S-aden	99.67
3lhh_A		172	CBS domain protein; structural genomics, PSI-2, pr	99.67
3lfr_A		136	Putative metal ION transporter; CBS, AMP, PSI, MCS	99.66
3i8n_A		130	Uncharacterized protein VP2912; APC64273.1, vibrio	99.66
2ef7_A		133	Hypothetical protein ST2348; CBS-domain, structura	99.66
3jtf_A		129	Magnesium and cobalt efflux protein; CBS domain, C	99.65
2rih_A		141	Conserved protein with 2 CBS domains; bateman doma	99.65
3k2v_A		149	Putative D-arabinose 5-phosphate isomerase; KPSF-l	99.64
3oco_A		153	Hemolysin-like protein containing CBS domains; str	99.64
3gby_A		128	Uncharacterized protein CT1051; CBS domain, struct	99.64
2p9m_A		138	Hypothetical protein MJ0922; structural genomics,	99.64
3nqr_A		127	Magnesium and cobalt efflux protein CORC; structur	99.64
2yzi_A		138	Hypothetical protein PH0107; sheet/helix/sheet/she	99.64
3k6e_A		156	CBS domain protein; streptococcus pneumoniae TIGR4	99.63
3fv6_A		159	YQZB protein; CBS domain dimer, metabolism regulat	99.63
3fhm_A		165	Uncharacterized protein ATU1752; CBS domain, proka	99.62
3lqn_A		150	CBS domain protein; csgid, structural genomics, un	99.62
4gqw_A		152	CBS domain-containing protein CBSX1, chloroplasti;	99.62
1pbj_A		125	Hypothetical protein; structural genomics, domain,	99.61
3oi8_A		156	Uncharacterized protein; structural genomics, PSI-	99.61
3ocm_A		173	Putative membrane protein; structural genomics, PS	99.6
1o50_A		157	CBS domain-containing predicted protein TM0935; CB	99.59
2uv4_A		152	5'-AMP-activated protein kinase subunit gamma-1; t	99.59
1y5h_A		133	Hypothetical protein RV2626C; CBS domain, unknown	99.59
2o16_A		160	Acetoin utilization protein ACUB, putative; struct	99.58
3kxr_A		205	Magnesium transporter, putative; cystathionine bet	99.58
3sl7_A		180	CBS domain-containing protein CBSX2; CBS-PAIR prot	99.58
2nyc_A		144	Nuclear protein SNF4; bateman2 domain, AMP kinase,	99.58
2rc3_A		135	CBS domain; in SITU proteolysis, BR, structural ge	99.58
1pvm_A		184	Conserved hypothetical protein TA0289; structural	99.58
2emq_A		157	Hypothetical conserved protein; CBS domains, NPPSF	99.57
3ctu_A		156	CBS domain protein; structural genomics, PSI-2, pr	99.57
2pfi_A		164	Chloride channel protein CLC-Ka; cystathionine bet	99.56
2j9l_A		185	Chloride channel protein 5; ION channel, ION trans	99.56
3l2b_A		245	Probable manganase-dependent inorganic pyrophospha	99.55
1yav_A		159	Hypothetical protein BSU14130; cystathionine beta	99.54
4fry_A		157	Putative signal-transduction protein with CBS DOM;	99.54
3pc3_A		527	CG1753, isoform A; CBS, synthase, PLP, heme, amino	99.5
1vr9_A		213	CBS domain protein/ACT domain protein; structural	99.5
2oux_A		286	Magnesium transporter; 10001B, structural genomics	99.48
2yvy_A		278	MGTE, Mg2+ transporter MGTE; membrane protein, tra	99.48
3ddj_A		296	CBS domain-containing protein; structural genomics	99.46
2yzq_A		282	Putative uncharacterized protein PH1780; sheet/hel	99.44
3t4n_C		323	Nuclear protein SNF4; CBS domain, nucleotide bindi	99.44
3kh5_A		280	Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, a	99.42
2zy9_A		473	Mg2+ transporter MGTE; membrane protien, metal tra	99.39
3kh5_A		280	Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, a	99.37
2qrd_G		334	Protein C1556.08C; AMPK, ADP, ATP-binding, kinase,	99.37
3ddj_A		296	CBS domain-containing protein; structural genomics	99.37
2yzq_A		282	Putative uncharacterized protein PH1780; sheet/hel	99.31
4fxs_A		496	Inosine-5'-monophosphate dehydrogenase; structural	99.27
3usb_A		511	Inosine-5'-monophosphate dehydrogenase; structural	99.26
2v8q_E		330	5'-AMP-activated protein kinase subunit gamma-1; p	99.25
1jcn_A		514	Inosine monophosphate dehydrogenase I; IMPD, IMPDH	99.25
4ene_A		446	CLC-EC1, H(+)/CL(-) exchange transporter CLCA; mem	99.24
3t4n_C		323	Nuclear protein SNF4; CBS domain, nucleotide bindi	99.23
2v8q_E		330	5'-AMP-activated protein kinase subunit gamma-1; p	99.23
1ots_A		465	Voltage-gated CLC-type chloride channel ERIC; CLC	99.22
1zfj_A		491	Inosine monophosphate dehydrogenase; IMPDH, CBS do	99.22
4avf_A		490	Inosine-5'-monophosphate dehydrogenase; oxidoreduc	99.17
1vrd_A		494	Inosine-5'-monophosphate dehydrogenase; TM1347, st	99.17
3nd0_A		466	SLL0855 protein; CLC family CL-/H+ antiporter, CLC	99.17
4af0_A		556	Inosine-5'-monophosphate dehydrogenase; oxidoreduc	99.11
1me8_A		503	Inosine-5'-monophosphate dehydrogenase; alpha beta	99.1
2cu0_A		486	Inosine-5'-monophosphate dehydrogenase; structural	99.1
2qrd_G		334	Protein C1556.08C; AMPK, ADP, ATP-binding, kinase,	99.09
3org_A		632	CMCLC; transporter, transport protein; 3.50A {Cyan	98.88
3ghd_A		70	A cystathionine beta-synthase domain protein FUSE	98.41
4esy_A		170	CBS domain containing membrane protein; structural	98.37
1vr9_A		213	CBS domain protein/ACT domain protein; structural	98.26
3ghd_A		70	A cystathionine beta-synthase domain protein FUSE	98.18
3fio_A		70	A cystathionine beta-synthase domain protein fused	98.15
3l2b_A		245	Probable manganase-dependent inorganic pyrophospha	98.06
2d4z_A		250	Chloride channel protein; CLC chloride channel cyt	98.02
3lv9_A		148	Putative transporter; CBS domain, PSI, MCSG, struc	97.98
3nqr_A		127	Magnesium and cobalt efflux protein CORC; structur	97.97
2rih_A		141	Conserved protein with 2 CBS domains; bateman doma	97.97
3jtf_A		129	Magnesium and cobalt efflux protein; CBS domain, C	97.96
2o16_A		160	Acetoin utilization protein ACUB, putative; struct	97.95
3k2v_A		149	Putative D-arabinose 5-phosphate isomerase; KPSF-l	97.94
3fio_A		70	A cystathionine beta-synthase domain protein fused	97.94
2yzi_A		138	Hypothetical protein PH0107; sheet/helix/sheet/she	97.93
3lfr_A		136	Putative metal ION transporter; CBS, AMP, PSI, MCS	97.9
2p9m_A		138	Hypothetical protein MJ0922; structural genomics,	97.89
3kpb_A		122	Uncharacterized protein MJ0100; CBS domain, S-aden	97.85
3gby_A		128	Uncharacterized protein CT1051; CBS domain, struct	97.84
3oi8_A		156	Uncharacterized protein; structural genomics, PSI-	97.83
3fv6_A		159	YQZB protein; CBS domain dimer, metabolism regulat	97.82
4gqw_A		152	CBS domain-containing protein CBSX1, chloroplasti;	97.79
3k6e_A		156	CBS domain protein; streptococcus pneumoniae TIGR4	97.77
3lqn_A		150	CBS domain protein; csgid, structural genomics, un	97.76
3i8n_A		130	Uncharacterized protein VP2912; APC64273.1, vibrio	97.76
2rc3_A		135	CBS domain; in SITU proteolysis, BR, structural ge	97.76
2ef7_A		133	Hypothetical protein ST2348; CBS-domain, structura	97.75
1pbj_A		125	Hypothetical protein; structural genomics, domain,	97.75
1y5h_A		133	Hypothetical protein RV2626C; CBS domain, unknown	97.74
1pvm_A		184	Conserved hypothetical protein TA0289; structural	97.74
3ctu_A		156	CBS domain protein; structural genomics, PSI-2, pr	97.74
3kxr_A		205	Magnesium transporter, putative; cystathionine bet	97.72
2emq_A		157	Hypothetical conserved protein; CBS domains, NPPSF	97.72
1yav_A		159	Hypothetical protein BSU14130; cystathionine beta	97.72
3sl7_A		180	CBS domain-containing protein CBSX2; CBS-PAIR prot	97.71
3fhm_A		165	Uncharacterized protein ATU1752; CBS domain, proka	97.7
3oco_A		153	Hemolysin-like protein containing CBS domains; str	97.69
1o50_A		157	CBS domain-containing predicted protein TM0935; CB	97.68
3lhh_A		172	CBS domain protein; structural genomics, PSI-2, pr	97.67
2pfi_A		164	Chloride channel protein CLC-Ka; cystathionine bet	97.66
2j9l_A		185	Chloride channel protein 5; ION channel, ION trans	97.66
2nyc_A		144	Nuclear protein SNF4; bateman2 domain, AMP kinase,	97.66
3hf7_A		130	Uncharacterized CBS-domain protein; CSB-domain PAI	97.62
4fry_A		157	Putative signal-transduction protein with CBS DOM;	97.61
3ocm_A		173	Putative membrane protein; structural genomics, PS	97.6
2uv4_A		152	5'-AMP-activated protein kinase subunit gamma-1; t	97.58
3pc3_A		527	CG1753, isoform A; CBS, synthase, PLP, heme, amino	97.39
2yvy_A		278	MGTE, Mg2+ transporter MGTE; membrane protein, tra	97.34
2oux_A		286	Magnesium transporter; 10001B, structural genomics	97.28
2zy9_A		473	Mg2+ transporter MGTE; membrane protien, metal tra	97.15
3usb_A		511	Inosine-5'-monophosphate dehydrogenase; structural	97.15
1me8_A		503	Inosine-5'-monophosphate dehydrogenase; alpha beta	97.07
4fxs_A		496	Inosine-5'-monophosphate dehydrogenase; structural	96.65
1vrd_A		494	Inosine-5'-monophosphate dehydrogenase; TM1347, st	96.42
1zfj_A		491	Inosine monophosphate dehydrogenase; IMPDH, CBS do	96.37
4af0_A		556	Inosine-5'-monophosphate dehydrogenase; oxidoreduc	96.22
2cu0_A		486	Inosine-5'-monophosphate dehydrogenase; structural	96.02
1jcn_A		514	Inosine monophosphate dehydrogenase I; IMPD, IMPDH	95.79
4avf_A		490	Inosine-5'-monophosphate dehydrogenase; oxidoreduc	95.7

>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}	Back alignment and structure

Probab=100.00  E-value=3e-89  Score=806.88  Aligned_cols=600  Identities=24%  Similarity=0.387  Sum_probs=453.4

Q ss_pred             HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHH
Q 003885          103 FKWT-LALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSINLGLAILAAILCAYIAPAAAGSGIP  181 (789)
Q Consensus       103 ~~w~-~~~liGv~~Gl~a~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~p~a~GsGip  181 (789)
                      .||+ +++++|+++|+++++++.+++++++++...... ...   ...|+.|+++++++++++++++.+++|.++|||||
T Consensus         8 ~r~~~~~~lvGi~~gl~~~~~~~~i~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~p~a~GsGIp   83 (632)
T 3org_A            8 LRLVCFLTLLGVTAALFIFAVDLAVHGLEELRMKISRL-AGR---FAGYILYVVSGVALCLLSTFWCAVLSTEAEGSGLP   83 (632)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SCH---HHHHHHHHHHHHHHHHHHHHHHHHSCGGGCBCSHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhh---hHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHH
Confidence            3554 788999999999999999999999876544322 111   45677788889999999999999999999999999


Q ss_pred             HHHHHHhCCC--CCCccchhhHHHHHHhhhhhhhccccccCchhHHHHHHHHHHHhhccCccccchhhhhhc-ccCChhh
Q 003885          182 EVKAYLNGID--AHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLR-YFKNDRD  258 (789)
Q Consensus       182 ev~~~lng~~--~~~~l~~~~l~~K~~~~i~sv~sG~svG~EGP~vhiGa~igs~l~~~~s~~~~l~~~~~~-~f~~~~~  258 (789)
                      |||++++|..  .++.+++|++++|++++++++++|+|+|||||+||+||++|+.+++.         ++++ +++|+++
T Consensus        84 ~v~~~l~g~~~~~~~~~~~~~~~~K~~~~~l~igsG~s~GrEGP~vqiGa~ig~~~~~~---------~~f~~~~~~~~~  154 (632)
T 3org_A           84 QMKSILSGFYDKMRSALELRVLFAKALGLICAIGGGLPVGWEGPNVHIACIIAHQFYRL---------GVFKELCTDRAL  154 (632)
T ss_dssp             HHHHHTTTTHHHHGGGGSHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHTTS---------HHHHHHHHSHHH
T ss_pred             HHHHHHhCccccccccccHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHHHHhhh---------hhhccccCCHHH
Confidence            9999999976  67889999999999999999999999999999999999999988751         0222 2348889


Q ss_pred             hhhHHHhhhhhhhhhhccCcchhhhHHHhHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCcccccCCCcceEEecc
Q 003885          259 RRDLITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFIEFCRSGRCGLFGQGGLIMFDVN  338 (789)
Q Consensus       259 ~r~lv~~GaAAGvaaaF~APigGvLFalE~~~~~~~~~~~~~~f~~~~va~~v~~~l~~~~~~~~~~~f~~~~~~~f~~~  338 (789)
                      ||++++||+|||+||+|||||||++|++||+.++|+.+.+|+++++|++++++.+.+...  ...+.+|+.    .|++ 
T Consensus       155 ~r~ll~aGaaAG~aaaF~aPlaGvlFalE~~~~~~~~~~~~~~~~as~~a~~v~~~~~~~--~~~~~~~~~----~~~~-  227 (632)
T 3org_A          155 RLQTLAAACAVGLASSFGAPLGGVLYSIETIASFYLVQAFWKGVLSALSGAIVYELLYTT--PLVEAFEGT----NFDA-  227 (632)
T ss_dssp             HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTCSEEETTHHHHHHHHHHHHHHHTTC------------------------
T ss_pred             HHHHHHHHHHHHHHHHhCCccHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhccC--ccccccccc----cccc-
Confidence            999999999999999999999999999999999999999999999999999887654210  000011111    1222 


Q ss_pred             CCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCchhHHHHHHHHHHHhhhhhcccccccccCCCCCC
Q 003885          339 SAKNSYSSADLLAVIFLGVIGGIFGSFYNYLVDKVLRTYSIINERGPIFKVLLVAAVSLLTSCCSYGLPWLSHCIPCPSY  418 (789)
Q Consensus       339 ~~~~~~~~~~l~~~i~lGv~~Gl~g~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~c~~~~~~  418 (789)
                        ..++++.++ +++++|+++|++|++|+++++++.+++  +++..+.++++++++++++++++.  +|..         
T Consensus       228 --~~~~~~~~l-~~~~lGi~~Gl~g~~f~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~--~p~~---------  291 (632)
T 3org_A          228 --SDVSRTQTL-LYAILGALMGVLGALFIRCVRSIYELR--MRHYPGTNRYFLVGVVALFASALQ--YPFR---------  291 (632)
T ss_dssp             ---CCCCSCTH-HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHSSTTCCTHHHHHHHHHHHHHHT--TTC----------
T ss_pred             --cCCCcHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhcchhHHHHHHHHHHHHHHHH--HHHH---------
Confidence              235678899 999999999999999999999887762  122223456777877777766433  2321         


Q ss_pred             cccCCCCCCCCCCCccccccCCCcchhhhhhhccCchHHHHhhhcCCCC---ccchHHHHHHHHHHHHHHHHHHhcCcCC
Q 003885          419 LEADRCPTVGRSGNYKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSGTS---KEFHLSTLLVFFVAIYCLGIITYGIAVP  495 (789)
Q Consensus       419 ~~~~~~p~~g~~g~~~~~~c~~g~y~~la~l~~~~~~~~i~~lf~~~~~---~~~~~~~L~~~~~~k~~lt~~t~g~g~~  495 (789)
                              .|             .+         ++++.++.+|++.+.   +++.+..|++++++|+++|++|+|+|+|
T Consensus       292 --------~g-------------~~---------~~~~~i~~l~~~~~~~~~~~~~~~~l~~~~~~k~~~t~~s~g~g~p  341 (632)
T 3org_A          292 --------LF-------------AL---------DPRATINDLFKAVPLYQTDHFGWTELILMPIIKFILVALSIGLPLP  341 (632)
T ss_dssp             -----------------------------------CHHHHHHHHSCC----------CCSSHHHHHHHHHHHHHTTSSSB
T ss_pred             --------hc-------------CC---------cHHHHHHHHHcCCccccccchhHHHHHHHHHHHHHHHHHHHhCCCc
Confidence                    11             00         123455666654221   1334446778889999999999999999


Q ss_pred             cccchHHHHHHHHHHHHHHHHhhhc-c-CcchHHHHHHHHHhhhhhhchhhHHHHhHHHhhcCCCccHHHHHHHHHHHHH
Q 003885          496 SGLFIPVILAGASYGRLVGNLLGAL-S-DLDTGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKT  573 (789)
Q Consensus       496 gG~f~P~l~iGa~~G~l~g~~~~~~-~-~~~~~~~alvGaaA~l~g~~r~pis~~vi~~ElTg~~~~l~pimia~~ia~~  573 (789)
                      ||+|+|++++||++|+++|.+++.. + .++|+.||++||||+++|++|+|+++ +|++|+||++++++|+|+++++|++
T Consensus       342 GGif~P~l~iGA~~G~~~g~~~~~~~p~~~~p~~~a~vGmaa~~~~v~~ap~t~-vi~~E~tg~~~~~lpl~ia~~~a~~  420 (632)
T 3org_A          342 AGVFVPSFLIGAGFGRLYGELMRVVFGNAIVPGSYAVVGAAAFTAGVTRALSCA-VIIFEVTGQIRHLVPVLISVLLAVI  420 (632)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHSCCTTHH-HHHHHHTCCCSCSHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhCCcccchHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCChhHHHHHHHHHHHHHH
Confidence            9999999999999999999998653 2 37899999999999999999998886 5899999999999999999999999


Q ss_pred             HHHhhCchhHHHHHHHcCCCcccccccccccccceeeccc--CCeEEecCCCcHHHHHHHHh-hcCCCeeEEeeCCCCCC
Q 003885          574 VADSFNQGVYDQIVKLKGLPYLEAHAEPYMKNLVASDVVS--GPLITFSGVEKVGNIMHALR-LTRHNGFPVIDEPPLTP  650 (789)
Q Consensus       574 v~~~~~~~iy~~~l~~kg~p~l~~~~~~~l~~l~v~dvM~--~~vvtv~~~~~V~~~~~~L~-~~~~~~fPVVd~~~~~~  650 (789)
                      +++.+++++||.+++.|++|++++..+...++++|+|+|+  +++++++++++++|+.+.|+ +++|+.+||+|++    
T Consensus       421 v~~~~~~~iY~~~~~~k~lp~l~~~~~~~~~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~----  496 (632)
T 3org_A          421 VGNAFNRSLYETLVLMKHLPYMPILRRDRSPEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDAN----  496 (632)
T ss_dssp             HHHHHCCCHHHHHHHHTTCCEEEEECTTCCTTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTT----
T ss_pred             HHHHhCCCHHHHHHHhcCCCccccccccccccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecC----
Confidence            9999999999999999999999876666678999999999  89999999999999999999 8999999999986    


Q ss_pred             CCeEEEEEehHHHHHHHhcCcc-ccccccCCcccccccchhhhccccCCCCCccc-ccc--cchhh---hhhcccccccc
Q 003885          651 APELCGLVLRSHLLVLLKGKKF-TKQKTMTGSDIMRRFKAHDFAKAGSGKGVKLE-DLD--IKEEE---MEMFVDLHPIT  723 (789)
Q Consensus       651 ~~~l~GlI~r~dLl~lL~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~i~-di~--l~~~~---~~~~~dL~~im  723 (789)
                       ++++|+|+++||++.+.++.. .+++. ...+....+...++.+.......+.. ...  ..+++   .+...+++++|
T Consensus       497 -~~lvGiVt~~DL~~~l~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iM  574 (632)
T 3org_A          497 -GYLLGAISRKEIVDRLQHVLEDVPEPI-AGHRTLVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPC  574 (632)
T ss_dssp             -CBBCCEESHHHHTTTTTTC--------------------------------------------------------CCSC
T ss_pred             -CeEEEEEEHHHHHHHHHHHhhhccccc-ccccceeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhh
Confidence             899999999999877654311 11100 00000111111222211110000000 000  00000   01112378999


Q ss_pred             cCCCeeecCCCCHHHHHHHHHHcCCCeEEEeeCCCCCCCEEEEEecccCcchhhhc
Q 003885          724 NTSPYTVVETMSLAKAAVLFRQLALRHLCVVPKTPGRPPIVGILTRHDFMPEHVLG  779 (789)
Q Consensus       724 ~~~p~tV~~~~sL~~a~~lf~~~glr~LpVVd~~~~~~~vvGIITr~DLl~~~~~~  779 (789)
                      +++|.+|++|+++.++.++|++++.+++||+ |   +|+++||||++|+++.+.++
T Consensus       575 t~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e---~G~lvGIVT~~Dll~~~~~~  626 (632)
T 3org_A          575 DVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-E---RGKLVGIVEREDVAYGYSNS  626 (632)
T ss_dssp             CCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-E---TTEEEEEEEGGGTEECCCC-
T ss_pred             cCCCceecCCCcHHHHHHHHHhcCCCEEEEE-E---CCEEEEEEehhhHHHHHhhh
Confidence            9999999999999999999999999999999 4   78999999999999876554

PyMOL of 3org

>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A	Back alignment and structure

>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...	Back alignment and structure

>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...	Back alignment and structure

>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1	Back alignment and structure

>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}	Back alignment and structure

>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}	Back alignment and structure

>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}	Back alignment and structure

>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*	Back alignment and structure

>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}	Back alignment and structure

>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}	Back alignment and structure

>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}	Back alignment and structure

>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1	Back alignment and structure

>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}	Back alignment and structure

>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A	Back alignment and structure

>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*	Back alignment and structure

>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}	Back alignment and structure

>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}	Back alignment and structure

>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}	Back alignment and structure

>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}	Back alignment and structure

>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1	Back alignment and structure

>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}	Back alignment and structure

>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*	Back alignment and structure

>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}	Back alignment and structure

>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0	Back alignment and structure

>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}	Back alignment and structure

>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1	Back alignment and structure

>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}	Back alignment and structure

>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}	Back alignment and structure

>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1	Back alignment and structure

>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A	Back alignment and structure

>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1	Back alignment and structure

>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}	Back alignment and structure

>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}	Back alignment and structure

>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A	Back alignment and structure

>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1	Back alignment and structure

>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A	Back alignment and structure

>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}	Back alignment and structure

>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}	Back alignment and structure

>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*	Back alignment and structure

>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*	Back alignment and structure

>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1	Back alignment and structure

>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}	Back alignment and structure

>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*	Back alignment and structure

>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1	Back alignment and structure

>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1	Back alignment and structure

>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A	Back alignment and structure

>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1	Back alignment and structure

>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1	Back alignment and structure

>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C	Back alignment and structure

>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*	Back alignment and structure

>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A	Back alignment and structure

>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*	Back alignment and structure

>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*	Back alignment and structure

>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1	Back alignment and structure

>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1	Back alignment and structure

>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}	Back alignment and structure

>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*	Back alignment and structure

>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*	Back alignment and structure

>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*	Back alignment and structure

>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...	Back alignment and structure

>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C	Back alignment and structure

>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*	Back alignment and structure

>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...	Back alignment and structure

>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1	Back alignment and structure

>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}	Back alignment and structure

>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1	Back alignment and structure

>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A	Back alignment and structure

>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*	Back alignment and structure

>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*	Back alignment and structure

>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1	Back alignment and structure

>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*	Back alignment and structure

>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}	Back alignment and structure

>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}	Back alignment and structure

>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}	Back alignment and structure

>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1	Back alignment and structure

>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}	Back alignment and structure

>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*	Back alignment and structure

>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1	Back alignment and structure

>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}	Back alignment and structure

>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}	Back alignment and structure

>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A	Back alignment and structure

>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}	Back alignment and structure

>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1	Back alignment and structure

>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*	Back alignment and structure

>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1	Back alignment and structure

>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}	Back alignment and structure

>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}	Back alignment and structure

>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*	Back alignment and structure

>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}	Back alignment and structure

>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}	Back alignment and structure

>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*	Back alignment and structure

>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}	Back alignment and structure

>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}	Back alignment and structure

>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0	Back alignment and structure

>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}	Back alignment and structure

>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1	Back alignment and structure

>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1	Back alignment and structure

>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1	Back alignment and structure

>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A	Back alignment and structure

>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A	Back alignment and structure

>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}	Back alignment and structure

>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}	Back alignment and structure

>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1	Back alignment and structure

>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}	Back alignment and structure

>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}	Back alignment and structure

>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}	Back alignment and structure

>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1	Back alignment and structure

>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}	Back alignment and structure

>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}	Back alignment and structure

>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*	Back alignment and structure

>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A	Back alignment and structure

>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}	Back alignment and structure

>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}	Back alignment and structure

>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}	Back alignment and structure

>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*	Back alignment and structure

>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A	Back alignment and structure

>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1	Back alignment and structure

>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A	Back alignment and structure

>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*	Back alignment and structure

>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*	Back alignment and structure

>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}	Back alignment and structure

>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1	Back alignment and structure

>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1	Back alignment and structure

>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*	Back alignment and structure

>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1	Back alignment and structure

>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*	Back alignment and structure

>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		789
d1otsa_		444	f.20.1.1 (A:) Clc chloride channel {Escherichia co	6e-55
d2j9la1		169	d.37.1.1 (A:578-746) Chloride channel protein 5, C	3e-07
d2d4za3		160	d.37.1.1 (A:527-606,A:691-770) Chloride channel pr	7e-06
d2yzqa1		156	d.37.1.1 (A:123-278) Uncharacterized protein PH178	8e-05
d2v8qe2		159	d.37.1.1 (E:23-181) 5'-AMP-activated protein kinas	2e-04
d2v8qe1		145	d.37.1.1 (E:182-326) 5'-AMP-activated protein kina	0.002
d2ooxe1		179	d.37.1.1 (E:3-181) Uncharacterized protein C1556.0	0.002
d1jr1a4		120	d.37.1.1 (A:113-232) Type II inosine monophosphate	0.003
d2nyca1		140	d.37.1.1 (A:181-320) Nuclear protein SNF4 {Baker's	0.003

>d1otsa_ f.20.1.1 (A:) Clc chloride channel {Escherichia coli [TaxId: 562]} Length = 444	Back information, alignment and structure


class: Membrane and cell surface proteins and peptides
fold: Clc chloride channel
superfamily: Clc chloride channel
family: Clc chloride channel
domain: Clc chloride channel
species: Escherichia coli [TaxId: 562]

 Score =  193 bits (492), Expect = 6e-55
 Identities = 111/499 (22%), Positives = 191/499 (38%), Gaps = 77/499 (15%)

Query: 92  RRKVEIFQYVVFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFV 151
           R+ +E  +  +    +A ++G L GLAAV  +  V  +   ++  + +    D + +   
Sbjct: 7   RQLLERDKTPLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTA--DNYPLLLT 64

Query: 152 ANTSINLGLAILAAILCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFG 211
                +  LA+    L    AP A GSGIPE++  L       +     L VK FG +  
Sbjct: 65  VAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIEGALEDQ--RPVRWWRVLPVKFFGGLGT 122

Query: 212 VAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDRRDLITCGAAAGV 271
           +  G V+G+EGP V  G  I  ++              +   K D  R  L+  GAAAG+
Sbjct: 123 LGGGMVLGREGPTVQIGGNIGRMVLD------------IFRLKGDEARHTLLATGAAAGL 170

Query: 272 AGAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFIEFCRSGRCGLFGQGG 331
           A AF AP+ G+LF +EE    +R  L+        V+       +    +    L   G 
Sbjct: 171 AAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMST---IMYRIFNHEVALIDVGK 227

Query: 332 LIMFDVNSAKNSYSSADLLAVIFLGVIGGIFGSFYNYLVDKVLRTYSIINERGPIFKVLL 391
           L    +N+         L   + LG+I GIFG  +N  V  +      ++       VL+
Sbjct: 228 LSDAPLNT---------LWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLM 278

Query: 392 VAAVSLLTSCCSYGLPWLSHCIPCPSYLEADRCPTVGRSGNYKNFQCPAGHYNDLASLFL 451
             A+  L     +  P  S                              G +N +     
Sbjct: 279 GGAIGGLCGLLGFVAPATSG-----------------------------GGFNLIPIATA 309

Query: 452 NTNDDAIRNLFSSGTSKEFHLSTLLVFFVAIYCLGIITYGIAVPSGLFIPVILAGASYGR 511
                             F +  L+  FVA     ++ +    P G+F P++  G   G 
Sbjct: 310 G----------------NFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGT 353

Query: 512 LVGNLLGAL---SDLDTGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVL 568
             G +   L     L+ G FA+ G  + L  ++R  ++  +++LE+T+N  ++  +++  
Sbjct: 354 AFGMVAVELFPQYHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITG 413

Query: 569 LISKTVADSFN-QGVYDQI 586
           L +  +A     + +Y  I
Sbjct: 414 LGATLLAQFTGGKPLYSAI 432

PyMOL of d1otsa_

>d2j9la1 d.37.1.1 (A:578-746) Chloride channel protein 5, ClC-5 {Human (Homo sapiens) [TaxId: 9606]} Length = 169	Back information, alignment and structure

>d2d4za3 d.37.1.1 (A:527-606,A:691-770) Chloride channel protein, CBS tandem {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]} Length = 160	Back information, alignment and structure

>d2yzqa1 d.37.1.1 (A:123-278) Uncharacterized protein PH1780 {Pyrococcus horikoshii [TaxId: 53953]} Length = 156	Back information, alignment and structure

>d2v8qe2 d.37.1.1 (E:23-181) 5'-AMP-activated protein kinase subunit gamma-1, AMPKg {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 159	Back information, alignment and structure

>d2v8qe1 d.37.1.1 (E:182-326) 5'-AMP-activated protein kinase subunit gamma-1, AMPKg {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 145	Back information, alignment and structure

>d2ooxe1 d.37.1.1 (E:3-181) Uncharacterized protein C1556.08c {Schizosaccharomyces pombe [TaxId: 4896]} Length = 179	Back information, alignment and structure

>d1jr1a4 d.37.1.1 (A:113-232) Type II inosine monophosphate dehydrogenase CBS domains {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Length = 120	Back information, alignment and structure

>d2nyca1 d.37.1.1 (A:181-320) Nuclear protein SNF4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 140	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		789
d1otsa_		444	Clc chloride channel {Escherichia coli [TaxId: 562	100.0
d2d4za3		160	Chloride channel protein, CBS tandem {Marbled elec	99.75
d2ef7a1		127	Uncharacterized protein ST2348 {Sulfolobus tokodai	99.72
d2yzqa1		156	Uncharacterized protein PH1780 {Pyrococcus horikos	99.72
d2o16a3		139	Hypothetical protein VC0737 {Vibrio cholerae [TaxI	99.72
d1pvma4		142	Hypothetical protein Ta0289 {Archaeon Thermoplasma	99.71
d2yzqa2		122	Uncharacterized protein PH1780 {Pyrococcus horikos	99.71
d2yzia1		132	Uncharacterized protein PH0107 {Pyrococcus horikos	99.7
d1y5ha3		123	Hypothetical protein Rv2626c {Mycobacterium tuberc	99.7
d2ouxa2		127	Magnesium transporter MgtE {Enterococcus faecalis	99.69
d1pbja3		120	Hypothetical protein MTH1622 {Archaeon Methanobact	99.68
d1vr9a3		121	Hypothetical protein TM0892, CBS tandem {Thermotog	99.68
d3ddja1		141	Uncharacterized protein SSO3205 {Sulfolobus solfat	99.68
d2yvxa2		144	Magnesium transporter MgtE {Thermus thermophilus [	99.67
d2rc3a1		127	Uncharacterized protein NE2398 {Nitrosomonas europ	99.65
d2j9la1		169	Chloride channel protein 5, ClC-5 {Human (Homo sap	99.65
d1yava3		132	Hypothetical protein YkuL {Bacillus subtilis [TaxI	99.65
d1zfja4		126	Type II inosine monophosphate dehydrogenase CBS do	99.65
d3ddja2		135	Uncharacterized protein SSO3205 {Sulfolobus solfat	99.63
d2riha1		131	Uncharacterized protein PAE2072 {Pyrobaculum aerop	99.63
d1o50a3		145	Hypothetical protein TM0935 {Thermotoga maritima [	99.58
d2nyca1		140	Nuclear protein SNF4 {Baker's yeast (Saccharomyces	99.58
d2ooxe2		153	Uncharacterized protein C1556.08c {Schizosaccharom	99.57
d2v8qe1		145	5'-AMP-activated protein kinase subunit gamma-1, A	99.56
d2v8qe2		159	5'-AMP-activated protein kinase subunit gamma-1, A	99.56
d2ooxe1		179	Uncharacterized protein C1556.08c {Schizosaccharom	99.53
d1jr1a4		120	Type II inosine monophosphate dehydrogenase CBS do	99.52
d1otsa_		444	Clc chloride channel {Escherichia coli [TaxId: 562	99.16
d2yzqa1		156	Uncharacterized protein PH1780 {Pyrococcus horikos	98.4
d2yzia1		132	Uncharacterized protein PH0107 {Pyrococcus horikos	98.38
d2ouxa2		127	Magnesium transporter MgtE {Enterococcus faecalis	98.31
d2o16a3		139	Hypothetical protein VC0737 {Vibrio cholerae [TaxI	98.26
d1vr9a3		121	Hypothetical protein TM0892, CBS tandem {Thermotog	98.21
d2yzqa2		122	Uncharacterized protein PH1780 {Pyrococcus horikos	98.17
d1pvma4		142	Hypothetical protein Ta0289 {Archaeon Thermoplasma	98.15
d1y5ha3		123	Hypothetical protein Rv2626c {Mycobacterium tuberc	98.14
d1o50a3		145	Hypothetical protein TM0935 {Thermotoga maritima [	98.1
d2yvxa2		144	Magnesium transporter MgtE {Thermus thermophilus [	98.07
d1zfja4		126	Type II inosine monophosphate dehydrogenase CBS do	98.06
d3ddja2		135	Uncharacterized protein SSO3205 {Sulfolobus solfat	98.03
d1pbja3		120	Hypothetical protein MTH1622 {Archaeon Methanobact	98.02
d2ef7a1		127	Uncharacterized protein ST2348 {Sulfolobus tokodai	97.97
d2d4za3		160	Chloride channel protein, CBS tandem {Marbled elec	97.92
d3ddja1		141	Uncharacterized protein SSO3205 {Sulfolobus solfat	97.91
d1yava3		132	Hypothetical protein YkuL {Bacillus subtilis [TaxI	97.91
d2nyca1		140	Nuclear protein SNF4 {Baker's yeast (Saccharomyces	97.91
d2riha1		131	Uncharacterized protein PAE2072 {Pyrobaculum aerop	97.84
d2rc3a1		127	Uncharacterized protein NE2398 {Nitrosomonas europ	97.83
d2j9la1		169	Chloride channel protein 5, ClC-5 {Human (Homo sap	97.69
d2ooxe2		153	Uncharacterized protein C1556.08c {Schizosaccharom	97.63
d2v8qe1		145	5'-AMP-activated protein kinase subunit gamma-1, A	97.62
d2ooxe1		179	Uncharacterized protein C1556.08c {Schizosaccharom	97.44
d1jr1a4		120	Type II inosine monophosphate dehydrogenase CBS do	97.43
d2v8qe2		159	5'-AMP-activated protein kinase subunit gamma-1, A	97.19

>d1otsa_ f.20.1.1 (A:) Clc chloride channel {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Clc chloride channel
superfamily: Clc chloride channel
family: Clc chloride channel
domain: Clc chloride channel
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2e-62  Score=553.28  Aligned_cols=413  Identities=26%  Similarity=0.385  Sum_probs=342.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHH
Q 003885          102 VFKWTLALLIGVLTGLAAVFCNFFVENIAGFKLLLINNLMLNDRHFMGFVANTSINLGLAILAAILCAYIAPAAAGSGIP  181 (789)
Q Consensus       102 ~~~w~~~~liGv~~Gl~a~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~p~a~GsGip  181 (789)
                      +..+++++++|+++|+++.+++..+++++++++....+..+  +++..+.++.+...++++++++++.++.|.++|||||
T Consensus        17 l~~~~la~liGi~~gl~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~GsGip   94 (444)
T d1otsa_          17 LAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTAD--NYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIP   94 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS--SHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSSCSHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHHHHHhhCCccCCCCHH
Confidence            34567899999999999999999999999999887655432  3334455566677788888899999999999999999


Q ss_pred             HHHHHHhCCCCCCccchhhHHHHHHhhhhhhhccccccCchhHHHHHHHHHHHhhccCccccchhhhhhcccCChhhhhh
Q 003885          182 EVKAYLNGIDAHSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYHLTWRWLRYFKNDRDRRD  261 (789)
Q Consensus       182 ev~~~lng~~~~~~l~~~~l~~K~~~~i~sv~sG~svG~EGP~vhiGa~igs~l~~~~s~~~~l~~~~~~~f~~~~~~r~  261 (789)
                      |+++++|+.  ++.+++|+++.|++++++++++|+|+|||||++|+|+++|++++|           ++|. ++++++|+
T Consensus        95 ev~~~l~~~--~~~~~~r~~~~k~~~~~~sl~~G~s~G~EGP~v~iga~i~~~l~~-----------~~~~-~~~~~~r~  160 (444)
T d1otsa_          95 EIEGALEDQ--RPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLD-----------IFRL-KGDEARHT  160 (444)
T ss_dssp             HHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHH-----------HTTC-CSHHHHHH
T ss_pred             HHHHHHhCC--CCCccHHHHHHHHHHHHHHHhcCCCccccccHHHHHHHHHHHHHH-----------HHhh-hhHHhhHH
Confidence            999999985  457789999999999999999999999999999999999999997           3332 46778999


Q ss_pred             HHHhhhhhhhhhhccCcchhhhHHHhHhhhhhhhh--hHHHHHHHHHHHHHHHHHHHHHhhcCcccccCCCcceEEeccC
Q 003885          262 LITCGAAAGVAGAFRAPVGGVLFALEEAASWWRSA--LLWRTFFTTAVVAVVLRGFIEFCRSGRCGLFGQGGLIMFDVNS  339 (789)
Q Consensus       262 lv~~GaAAGvaaaF~APigGvLFalE~~~~~~~~~--~~~~~f~~~~va~~v~~~l~~~~~~~~~~~f~~~~~~~f~~~~  339 (789)
                      +++||+|||+||+|||||+|++|++|++.++|+..  .++..++++.+++++.+..           .++..  .|+++.
T Consensus       161 l~~~GaaAglaa~F~aPlaG~lFa~E~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~-----------~~~~~--~~~~~~  227 (444)
T d1otsa_         161 LLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIF-----------NHEVA--LIDVGK  227 (444)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHHHHTTTTSCSSSCCCCCHHHHHHHHHHHHHHHHHH-----------SCSCC--SSCCCC
T ss_pred             HHHHHHHHHHhhccCCchhhhhhhhHHHhhcchHHHHHHHHHHhhhHHHhhheeec-----------cCccc--cccccc
Confidence            99999999999999999999999999999877543  3566666666555554432           12222  344443


Q ss_pred             CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCchhHHHHHHHHHHHhhhhhcccccccccCCCCCCc
Q 003885          340 AKNSYSSADLLAVIFLGVIGGIFGSFYNYLVDKVLRTYSIINERGPIFKVLLVAAVSLLTSCCSYGLPWLSHCIPCPSYL  419 (789)
Q Consensus       340 ~~~~~~~~~l~~~i~lGv~~Gl~g~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~c~~~~~~~  419 (789)
                       ...++..++++++++|+++|++|.+|++.+.++.+++++.+.....++++.+.+++++++++.++.|..          
T Consensus       228 -~~~~~~~~~~~~~~lgi~~g~~g~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~~p~~----------  296 (444)
T d1otsa_         228 -LSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPAT----------  296 (444)
T ss_dssp             -CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCGGG----------
T ss_pred             -ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHhccCccc----------
Confidence             456778899999999999999999999999999999887765444455666777788888888877765          


Q ss_pred             ccCCCCCCCCCCCccccccCCCcchhhhhhhccCchHHHHhhhcCCCCccchHHHHHHHHHHHHHHHHHHhcCcCCcccc
Q 003885          420 EADRCPTVGRSGNYKNFQCPAGHYNDLASLFLNTNDDAIRNLFSSGTSKEFHLSTLLVFFVAIYCLGIITYGIAVPSGLF  499 (789)
Q Consensus       420 ~~~~~p~~g~~g~~~~~~c~~g~y~~la~l~~~~~~~~i~~lf~~~~~~~~~~~~L~~~~~~k~~lt~~t~g~g~~gG~f  499 (789)
                             .|.            .|            +.+..++++    +++...+++++++|++++++|+|+|+|||+|
T Consensus       297 -------~g~------------G~------------~~~~~~~~~----~~~~~~l~~~~~~K~~~t~~t~~~G~~GG~f  341 (444)
T d1otsa_         297 -------SGG------------GF------------NLIPIATAG----NFSMGMLVFIFVARVITTLLCFSSGAPGGIF  341 (444)
T ss_dssp             -------SSC------------ST------------THHHHHHHT----CSCHHHHHHHHHHHHHHHHHHHHTTCSSBSH
T ss_pred             -------CCC------------ch------------HHHHHHhcC----CcchHHHHHHHHHHHHHHHHHhhcCCCCCee
Confidence                   121            12            223444443    3456778888899999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhhh---ccCcchHHHHHHHHHhhhhhhchhhHHHHhHHHhhcCCCccHHHHHHHHHHHHHHHH
Q 003885          500 IPVILAGASYGRLVGNLLGA---LSDLDTGLFALLGAASFLGGTMRMTVSLCVILLELTNNLLMLPLVMLVLLISKTVAD  576 (789)
Q Consensus       500 ~P~l~iGa~~G~l~g~~~~~---~~~~~~~~~alvGaaA~l~g~~r~pis~~vi~~ElTg~~~~l~pimia~~ia~~v~~  576 (789)
                      +|++++||++|+++|.++..   ....+|+.|+++||||+++|++|+|+|+++|++|+||++++++|+|+++++|+++++
T Consensus       342 ~P~l~iGa~~G~~~~~~~~~~~~~~~~~~~~~alvGmaa~~a~~~~~Plta~vl~~Eltg~~~~~~p~~ia~~~a~~v~~  421 (444)
T d1otsa_         342 APMLALGTVLGTAFGMVAVELFPQYHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQ  421 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHTHHHHHTSCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCcccCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998865   246789999999999999999999999999999999999999999999999999999


Q ss_pred             hh-CchhHHHHHHH
Q 003885          577 SF-NQGVYDQIVKL  589 (789)
Q Consensus       577 ~~-~~~iy~~~l~~  589 (789)
                      .+ ++|+||.+++.
T Consensus       422 ~~~~~siY~~~l~~  435 (444)
T d1otsa_         422 FTGGKPLYSAILAR  435 (444)
T ss_dssp             TTTCCCHHHHHHHH
T ss_pred             HhCCCChHHHHHHH
Confidence            99 78999999875

PyMOL of d1otsa_

>d2d4za3 d.37.1.1 (A:527-606,A:691-770) Chloride channel protein, CBS tandem {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}	Back information, alignment and structure

>d2ef7a1 d.37.1.1 (A:1-127) Uncharacterized protein ST2348 {Sulfolobus tokodaii [TaxId: 111955]}	Back information, alignment and structure

>d2yzqa1 d.37.1.1 (A:123-278) Uncharacterized protein PH1780 {Pyrococcus horikoshii [TaxId: 53953]}	Back information, alignment and structure

>d2o16a3 d.37.1.1 (A:20-158) Hypothetical protein VC0737 {Vibrio cholerae [TaxId: 666]}	Back information, alignment and structure

>d1pvma4 d.37.1.1 (A:1-142) Hypothetical protein Ta0289 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}	Back information, alignment and structure

>d2yzqa2 d.37.1.1 (A:1-122) Uncharacterized protein PH1780 {Pyrococcus horikoshii [TaxId: 53953]}	Back information, alignment and structure

>d2yzia1 d.37.1.1 (A:4-135) Uncharacterized protein PH0107 {Pyrococcus horikoshii [TaxId: 53953]}	Back information, alignment and structure

>d1y5ha3 d.37.1.1 (A:2-124) Hypothetical protein Rv2626c {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d2ouxa2 d.37.1.1 (A:136-262) Magnesium transporter MgtE {Enterococcus faecalis [TaxId: 1351]}	Back information, alignment and structure

>d1pbja3 d.37.1.1 (A:2-121) Hypothetical protein MTH1622 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}	Back information, alignment and structure

>d1vr9a3 d.37.1.1 (A:1-121) Hypothetical protein TM0892, CBS tandem {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d3ddja1 d.37.1.1 (A:136-276) Uncharacterized protein SSO3205 {Sulfolobus solfataricus [TaxId: 2287]}	Back information, alignment and structure

>d2yvxa2 d.37.1.1 (A:132-275) Magnesium transporter MgtE {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d2rc3a1 d.37.1.1 (A:23-149) Uncharacterized protein NE2398 {Nitrosomonas europaea [TaxId: 915]}	Back information, alignment and structure

>d2j9la1 d.37.1.1 (A:578-746) Chloride channel protein 5, ClC-5 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1yava3 d.37.1.1 (A:13-144) Hypothetical protein YkuL {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1zfja4 d.37.1.1 (A:95-220) Type II inosine monophosphate dehydrogenase CBS domains {Streptococcus pyogenes [TaxId: 1314]}	Back information, alignment and structure

>d3ddja2 d.37.1.1 (A:1-135) Uncharacterized protein SSO3205 {Sulfolobus solfataricus [TaxId: 2287]}	Back information, alignment and structure

>d2riha1 d.37.1.1 (A:2-132) Uncharacterized protein PAE2072 {Pyrobaculum aerophilum [TaxId: 13773]}	Back information, alignment and structure

>d1o50a3 d.37.1.1 (A:1-145) Hypothetical protein TM0935 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d2nyca1 d.37.1.1 (A:181-320) Nuclear protein SNF4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2ooxe2 d.37.1.1 (E:182-334) Uncharacterized protein C1556.08c {Schizosaccharomyces pombe [TaxId: 4896]}	Back information, alignment and structure

>d2v8qe1 d.37.1.1 (E:182-326) 5'-AMP-activated protein kinase subunit gamma-1, AMPKg {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d2v8qe2 d.37.1.1 (E:23-181) 5'-AMP-activated protein kinase subunit gamma-1, AMPKg {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d2ooxe1 d.37.1.1 (E:3-181) Uncharacterized protein C1556.08c {Schizosaccharomyces pombe [TaxId: 4896]}	Back information, alignment and structure

>d1jr1a4 d.37.1.1 (A:113-232) Type II inosine monophosphate dehydrogenase CBS domains {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}	Back information, alignment and structure

>d1otsa_ f.20.1.1 (A:) Clc chloride channel {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2yzqa1 d.37.1.1 (A:123-278) Uncharacterized protein PH1780 {Pyrococcus horikoshii [TaxId: 53953]}	Back information, alignment and structure

>d2yzia1 d.37.1.1 (A:4-135) Uncharacterized protein PH0107 {Pyrococcus horikoshii [TaxId: 53953]}	Back information, alignment and structure

>d2ouxa2 d.37.1.1 (A:136-262) Magnesium transporter MgtE {Enterococcus faecalis [TaxId: 1351]}	Back information, alignment and structure

>d2o16a3 d.37.1.1 (A:20-158) Hypothetical protein VC0737 {Vibrio cholerae [TaxId: 666]}	Back information, alignment and structure

>d1vr9a3 d.37.1.1 (A:1-121) Hypothetical protein TM0892, CBS tandem {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d2yzqa2 d.37.1.1 (A:1-122) Uncharacterized protein PH1780 {Pyrococcus horikoshii [TaxId: 53953]}	Back information, alignment and structure

>d1pvma4 d.37.1.1 (A:1-142) Hypothetical protein Ta0289 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}	Back information, alignment and structure

>d1y5ha3 d.37.1.1 (A:2-124) Hypothetical protein Rv2626c {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1o50a3 d.37.1.1 (A:1-145) Hypothetical protein TM0935 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d2yvxa2 d.37.1.1 (A:132-275) Magnesium transporter MgtE {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d1zfja4 d.37.1.1 (A:95-220) Type II inosine monophosphate dehydrogenase CBS domains {Streptococcus pyogenes [TaxId: 1314]}	Back information, alignment and structure

>d3ddja2 d.37.1.1 (A:1-135) Uncharacterized protein SSO3205 {Sulfolobus solfataricus [TaxId: 2287]}	Back information, alignment and structure

>d1pbja3 d.37.1.1 (A:2-121) Hypothetical protein MTH1622 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}	Back information, alignment and structure

>d2ef7a1 d.37.1.1 (A:1-127) Uncharacterized protein ST2348 {Sulfolobus tokodaii [TaxId: 111955]}	Back information, alignment and structure

>d2d4za3 d.37.1.1 (A:527-606,A:691-770) Chloride channel protein, CBS tandem {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}	Back information, alignment and structure

>d3ddja1 d.37.1.1 (A:136-276) Uncharacterized protein SSO3205 {Sulfolobus solfataricus [TaxId: 2287]}	Back information, alignment and structure

>d1yava3 d.37.1.1 (A:13-144) Hypothetical protein YkuL {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d2nyca1 d.37.1.1 (A:181-320) Nuclear protein SNF4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2riha1 d.37.1.1 (A:2-132) Uncharacterized protein PAE2072 {Pyrobaculum aerophilum [TaxId: 13773]}	Back information, alignment and structure

>d2rc3a1 d.37.1.1 (A:23-149) Uncharacterized protein NE2398 {Nitrosomonas europaea [TaxId: 915]}	Back information, alignment and structure

>d2j9la1 d.37.1.1 (A:578-746) Chloride channel protein 5, ClC-5 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2ooxe2 d.37.1.1 (E:182-334) Uncharacterized protein C1556.08c {Schizosaccharomyces pombe [TaxId: 4896]}	Back information, alignment and structure

>d2v8qe1 d.37.1.1 (E:182-326) 5'-AMP-activated protein kinase subunit gamma-1, AMPKg {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d2ooxe1 d.37.1.1 (E:3-181) Uncharacterized protein C1556.08c {Schizosaccharomyces pombe [TaxId: 4896]}	Back information, alignment and structure

>d1jr1a4 d.37.1.1 (A:113-232) Type II inosine monophosphate dehydrogenase CBS domains {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}	Back information, alignment and structure

>d2v8qe2 d.37.1.1 (E:23-181) 5'-AMP-activated protein kinase subunit gamma-1, AMPKg {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure