Citrus Sinensis ID: 003909
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 787 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SY55 | 998 | Calcium-transporting ATPa | yes | no | 0.998 | 0.787 | 0.844 | 0.0 | |
| P54209 | 1037 | Cation-transporting ATPas | N/A | no | 0.988 | 0.750 | 0.580 | 0.0 | |
| Q9YGL9 | 1042 | Sarcoplasmic/endoplasmic | yes | no | 0.987 | 0.745 | 0.542 | 0.0 | |
| Q64578 | 994 | Sarcoplasmic/endoplasmic | yes | no | 0.987 | 0.781 | 0.553 | 0.0 | |
| Q8R429 | 994 | Sarcoplasmic/endoplasmic | yes | no | 0.987 | 0.781 | 0.552 | 0.0 | |
| P04191 | 1001 | Sarcoplasmic/endoplasmic | yes | no | 0.987 | 0.776 | 0.552 | 0.0 | |
| Q0VCY0 | 993 | Sarcoplasmic/endoplasmic | yes | no | 0.988 | 0.783 | 0.552 | 0.0 | |
| O14983 | 1001 | Sarcoplasmic/endoplasmic | yes | no | 0.987 | 0.776 | 0.552 | 0.0 | |
| P22700 | 1020 | Calcium-transporting ATPa | yes | no | 0.988 | 0.762 | 0.549 | 0.0 | |
| Q292Q0 | 1002 | Calcium-transporting ATPa | yes | no | 0.988 | 0.776 | 0.547 | 0.0 |
| >sp|Q9SY55|ECA3_ARATH Calcium-transporting ATPase 3, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA3 PE=2 SV=3 | Back alignment and function desciption |
|---|
Score = 1364 bits (3531), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 665/787 (84%), Positives = 723/787 (91%), Gaps = 1/787 (0%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
MEDAYARSV EVLDFFGVDPTKGL+DSQV H R+YG+NVLP+EKRT FWKLVLKQFDDL
Sbjct: 1 MEDAYARSVSEVLDFFGVDPTKGLSDSQVVHHSRLYGRNVLPEEKRTPFWKLVLKQFDDL 60
Query: 61 LVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRA 120
LVKILI AA++SF LAL NGETGLTAFLEP VILLILAANAAVGVITETNAEKALEELRA
Sbjct: 61 LVKILIVAAIVSFVLALANGETGLTAFLEPFVILLILAANAAVGVITETNAEKALEELRA 120
Query: 121 YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
YQA+IATVLRNGCFSILPA ELVPGDIVEV VGCKIPAD+RMIEM SN RVDQAILTGE
Sbjct: 121 YQANIATVLRNGCFSILPATELVPGDIVEVTVGCKIPADLRMIEMSSNTFRVDQAILTGE 180
Query: 181 SCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240
SCSVEK++D + TNAVYQDK NILFSGT VVAGR RAVV+GVG+NTAMGSI DSMLQT+
Sbjct: 181 SCSVEKDVDCTLTTNAVYQDKKNILFSGTDVVAGRGRAVVIGVGSNTAMGSIHDSMLQTD 240
Query: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
DE TPLKKKLDEFG+FLAKVIAGICVLVW+VNIGHF DPSHGGF +GAIHYFKIAVALAV
Sbjct: 241 DEATPLKKKLDEFGSFLAKVIAGICVLVWVVNIGHFSDPSHGGFFKGAIHYFKIAVALAV 300
Query: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
AAIPEGLPAVVTTCLALGTK+MARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSV+
Sbjct: 301 AAIPEGLPAVVTTCLALGTKKMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVS 360
Query: 361 KICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNES 420
KICVV S + GP+I E+ V+GTTYAPEG VFDS+G+QL+ PAQ PCL H+A CS+LCN+S
Sbjct: 361 KICVVQSAEHGPMINEFTVSGTTYAPEGTVFDSNGMQLDLPAQSPCLHHLAMCSSLCNDS 420
Query: 421 VLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIE 480
+LQYNPDK +YEKIGE+TEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH+WE +
Sbjct: 421 ILQYNPDKDSYEKIGESTEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHYWENQ 480
Query: 481 FKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIR 540
FKKV +LEF+RDRKMMSVLCSHKQM VMFSKGAPES+++RC ILCN +G +VP+TA R
Sbjct: 481 FKKVYVLEFTRDRKMMSVLCSHKQMDVMFSKGAPESIIARCNKILCNGDGSVVPLTAAGR 540
Query: 541 AELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNA 600
AELESR S G E LRCLALA K +P +QT+SYD+E DLTFIGLVGMLDPPREEV++A
Sbjct: 541 AELESRFYSF-GDETLRCLALAFKTVPHGQQTISYDNENDLTFIGLVGMLDPPREEVRDA 599
Query: 601 MLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660
ML+CMTAGIRVIVVTGDNKSTAES+C KIGAFD+LVDF G SYTASEFE LPA+QQT+AL
Sbjct: 600 MLACMTAGIRVIVVTGDNKSTAESLCRKIGAFDNLVDFSGMSYTASEFERLPAVQQTLAL 659
Query: 661 QHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 720
+ M LF+RVEPSHKRMLVEALQ QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA
Sbjct: 660 RRMTLFSRVEPSHKRMLVEALQKQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 719
Query: 721 SDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 780
SDMVLADDNFA+IVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV
Sbjct: 720 SDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 779
Query: 781 SLISVNI 787
L+ VN+
Sbjct: 780 QLLWVNL 786
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment. Involved in calcium-enhanced root growth, in tolerance to toxic levels of manganese and in secretory processes. Has a crucial role in manganese nutrition, but is not involved in transporting copper, iron or zinc. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|P54209|ATC1_DUNBI Cation-transporting ATPase CA1 OS=Dunaliella bioculata GN=CA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/798 (58%), Positives = 591/798 (74%), Gaps = 20/798 (2%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
M+DAY+ V EV F+ VD +GL+D V + YG+N + E+ T WKL+LKQFDDL
Sbjct: 24 MQDAYSSEVQEVAAFYHVDLDRGLSDRDVQQARIKYGRNQMEAEQSTPLWKLILKQFDDL 83
Query: 61 LVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRA 120
LVKIL+ AA++ F +A+ GE+ + +EP VILLIL ANA VGV+TE NAEKA+E+L++
Sbjct: 84 LVKILLGAAIVDFIIAISEGESIQSGLIEPMVILLILVANATVGVVTERNAEKAIEQLKS 143
Query: 121 YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
Y+AD ATVLRNG ++P+A++VPGDIVE+ VG K+PAD R+ + + L++DQ++LTGE
Sbjct: 144 YEADDATVLRNGQLQLIPSADIVPGDIVELAVGNKVPADTRVSHIYTTSLKIDQSLLTGE 203
Query: 181 SCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240
S +VEK + + AVYQDK N+LFSGT+VVAGRAR +VVG G+NTA+G IRD+M E
Sbjct: 204 SQAVEKHTEVVHNEQAVYQDKLNMLFSGTLVVAGRARGIVVGTGSNTAIGKIRDAMGVEE 263
Query: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
D VTPLK KLDEFG L+KVIAGICVLVW+VNI F DP+ GG+ +GAIHYFKIAVALAV
Sbjct: 264 DVVTPLKAKLDEFGALLSKVIAGICVLVWVVNINRFNDPALGGWFQGAIHYFKIAVALAV 323
Query: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
AAIPEGLPAVVTTCLALGT++MAR NAIVR+LPSVETLGCTTVICSDKTGTLTTN MSV
Sbjct: 324 AAIPEGLPAVVTTCLALGTRKMARHNAIVRTLPSVETLGCTTVICSDKTGTLTTNQMSVI 383
Query: 361 KICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNES 420
K+ V S +AE+ VTGTT++PEG+V G+ L PA PCL H A+C+ALCN+S
Sbjct: 384 KVAAVQSSSSQ--LAEFDVTGTTFSPEGMVLGPGGVVLRQPADTPCLAHAAQCAALCNDS 441
Query: 421 VLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASY-CNHHWEI 479
+ G ++IGE+TE+ALRV AEK+GL PS++ R+ + N+ W+
Sbjct: 442 QVFVAQKTGTLQRIGESTEIALRVFAEKIGL------PSSIRPDRPISRSQFGTNNFWQE 495
Query: 480 EFKKVSILEFSRDRKMMSVLC--SHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTA 537
+ +++++LEFSRDRKMMSVL S +Q + +SKGAPE VL +C+++L N+ VP+T
Sbjct: 496 DVERLALLEFSRDRKMMSVLVKGSDRQHNI-WSKGAPEFVLRKCSHVLANNGEGAVPLTD 554
Query: 538 NIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEV 597
N+R + S + + ++ALRCLALA K +P L Y DE LTFIGL+GM DPPR E
Sbjct: 555 NMRQAILSDMQAFGSRQALRCLALAFKSVPTTTTKLDYSDESGLTFIGLLGMHDPPRPEC 614
Query: 598 KNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLV--------DFVGRSYTASEFE 649
++A+ +C AGI+VI+VTGDNK TAE++ ++GA D +G SYT EFE
Sbjct: 615 RSALSTCHNAGIKVIMVTGDNKGTAEAVARQVGALSPSTALAGSDDEDNLGISYTGREFE 674
Query: 650 ELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709
E+ A+ Q A +++ + +RVEP HK LVE L+ Q VVAMTGDGVNDAPAL +ADIGIA
Sbjct: 675 EMGALGQAAATRNLVVLSRVEPMHKLRLVELLKAQGHVVAMTGDGVNDAPALLRADIGIA 734
Query: 710 MGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAA 769
MGSGTAVAK A+DMVL DDNFATIV AVAEGR I+NNTKQFIRYMISSNIGEVV IF+AA
Sbjct: 735 MGSGTAVAKHAADMVLGDDNFATIVFAVAEGRVIFNNTKQFIRYMISSNIGEVVAIFLAA 794
Query: 770 VLGIPDTLAPVSLISVNI 787
+LG+P+ L PV L+ VN+
Sbjct: 795 LLGLPEVLTPVQLLWVNL 812
|
Could possibly be a calcium ATPase. Dunaliella bioculata (taxid: 13790) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q9YGL9|AT2A3_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Gallus gallus GN=ATP2A3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/807 (54%), Positives = 562/807 (69%), Gaps = 30/807 (3%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A++ V +VL FGV + GL+ QV R+ YG N LP E+R + W+LVL+QF+DL
Sbjct: 1 MEAAHSVPVQDVLSRFGVAESCGLSPEQVRRNREKYGPNELPAEERKSLWELVLEQFEDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELR 119
LV+IL+ AA +SF LA GE TAF+EP VI++IL ANA VGV E NAE A+E L+
Sbjct: 61 LVRILLMAAFLSFILAWFEEGEESTTAFVEPIVIIMILIANAVVGVWQERNAESAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V+R + + A ++VPGDIVEV VG K+PAD+R+IE+ S LRVDQ+IL
Sbjct: 121 EYEPEMGKVIRADRSGVQRIRARDIVPGDIVEVAVGDKVPADIRIIEIRSTTLRVDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSML 237
TGES SV K D I AV QDK N+LFSGT + AG+A +V+ G T +G IR+ M+
Sbjct: 181 TGESMSVIKHADPIPDPRAVNQDKKNMLFSGTNIAAGKAVGIVIATGVYTEIGKIRNQMV 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
+TE E TPL++KLDEF L+KVI +C+ VW++NI HF DP HGG + RGAI+YFK +V
Sbjct: 241 ETEPEKTPLQQKLDEFSQQLSKVIFLVCIAVWVINISHFSDPVHGGSWFRGAIYYFKTSV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQQGPI-IAEYGVTGTTYAPEGVVF-DSSGIQLEFPAQLPCLLHIARCS 414
MSV ++ ++ V+ + E+ +TG+TYAPEG + D ++ Q L+ +A
Sbjct: 361 MSVCRMFIMEKVEGTQCSLHEFSITGSTYAPEGQILKDEKPVRC---GQYDGLVELATIC 417
Query: 415 ALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCN 474
ALCN+S L YN K YEK+GEATE AL L EK+ + FD+ S L SK ERA+ CN
Sbjct: 418 ALCNDSSLDYNESKKVYEKVGEATETALTCLVEKMNV--FDTDTSKL---SKVERANACN 472
Query: 475 HHWEIEFKKVSILEFSRDRKMMSVLCS------HKQMCVMFSKGAPESVLSRCTNILCND 528
+ +K LEFSRDRK MSV C+ + MF KGAPESV+ RCT++
Sbjct: 473 SVIKHLMRKECTLEFSRDRKSMSVYCTPTGPGHNSAGSKMFVKGAPESVIERCTHVRVGT 532
Query: 529 NGFIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EKD 580
VP+T +R ++ S++ G + LRCLALA P+ R+T+ D E +
Sbjct: 533 AK--VPLTPPVREKILSQIRDWGMGTDTLRCLALATHDAPVQRETMQLHDSTTFTHYETN 590
Query: 581 LTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640
LTF+G VGMLDPPR+EV +++ C AGIRVI++TGDNK TA +IC +IG F D G
Sbjct: 591 LTFVGCVGMLDPPRKEVTSSIEMCRKAGIRVIMITGDNKGTAVAICRRIGIFTESEDVAG 650
Query: 641 RSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPA 700
++YT EF+EL Q A + F RVEP+HK +VE LQ+ NE+ AMTGDGVNDAPA
Sbjct: 651 KAYTGREFDELSPEAQRQACREARCFARVEPAHKSRIVEYLQSFNEITAMTGDGVNDAPA 710
Query: 701 LKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760
LKKA+IGIAMGSGTAVAKSA++MVL+DDNF+TIV+AV EGRAIYNN KQFIRY+ISSN+G
Sbjct: 711 LKKAEIGIAMGSGTAVAKSAAEMVLSDDNFSTIVSAVEEGRAIYNNMKQFIRYLISSNVG 770
Query: 761 EVVCIFVAAVLGIPDTLAPVSLISVNI 787
EVVCIF+ A+LG+P+ L PV L+ VN+
Sbjct: 771 EVVCIFLTAILGLPEALIPVQLLWVNL 797
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of the calcium. Transports calcium ions from the cytosol into the sarcoplasmic/endoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Gallus gallus (taxid: 9031) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q64578|AT2A1_RAT Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus GN=Atp2a1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 814 bits (2103), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/807 (55%), Positives = 560/807 (69%), Gaps = 30/807 (3%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A+++S E L +FGV T GLT QV RH+ YG N LP E+ + W+LV++QF+DL
Sbjct: 1 MEAAHSKSTEECLSYFGVSETTGLTPDQVKRHLEKYGPNELPAEEGKSLWELVVEQFEDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELR 119
LV+IL+ AA ISF LA GE +TAF+EP VILLIL ANA VGV E NAE A+E L+
Sbjct: 61 LVRILLLAACISFVLAWFEEGEETVTAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V R S+ + A ++VPGDIVEV VG K+PAD+R++ + S LRVDQ+IL
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSML 237
TGES SV K D + AV QDK N+LFSGT + AG+A +V G +T +G IRD M
Sbjct: 181 TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAVGIVATTGVSTEIGKIRDQMA 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
TE + TPL++KLDEFG L+KVI+ ICV VW++NIGHF DP HGG + RGAI+YFKIAV
Sbjct: 241 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWFRGAIYYFKIAV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQQGPI--IAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCS 414
MSV K+ ++ V G I + E+ +TG+TYAPEG V + + Q L+ +A
Sbjct: 361 MSVCKMFIIDKVD-GDICSLNEFSITGSTYAPEGEVLKND--KPVRAGQYDGLVELATIC 417
Query: 415 ALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCN 474
ALCN+S L +N KG YEK+GEATE AL L EK+ + + + LSK ERA+ CN
Sbjct: 418 ALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNV-----FNTEVRSLSKVERANACN 472
Query: 475 HHWEIEFKKVSILEFSRDRKMMSVLCSHKQMC------VMFSKGAPESVLSRCTNILCND 528
KK LEFSRDRK MSV CS + MF KGAPE V+ RC +
Sbjct: 473 SVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGT 532
Query: 529 NGFIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EKD 580
VP+T ++ ++ S + G++ LRCLALA + P R+ + DD E D
Sbjct: 533 TR--VPLTGPVKEKIMSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSAKFMEYEMD 590
Query: 581 LTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640
LTF+G+VGMLDPPR+EV ++ C AGIRVI++TGDNK TA +IC +IG F +
Sbjct: 591 LTFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFSENEEVAD 650
Query: 641 RSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPA 700
R+YT EF++LP +Q A + F RVEPSHK +VE LQ+ +E+ AMTGDGVNDAPA
Sbjct: 651 RAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPA 710
Query: 701 LKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760
LKKA+IGIAMGSGTAVAK+AS+MVLADDNF+TIVAAV EGRAIYNN KQFIRY+ISSN+G
Sbjct: 711 LKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVG 770
Query: 761 EVVCIFVAAVLGIPDTLAPVSLISVNI 787
EVVCIF+ A LG+P+ L PV L+ VN+
Sbjct: 771 EVVCIFLTAALGLPEALIPVQLLWVNL 797
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q8R429|AT2A1_MOUSE Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Mus musculus GN=Atp2a1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/807 (55%), Positives = 560/807 (69%), Gaps = 30/807 (3%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A+++S E L +FGV T GLT QV RH+ YG N LP E+ + W+LV++QF+DL
Sbjct: 1 MEAAHSKSTEECLSYFGVSETTGLTPDQVKRHLEKYGPNELPAEEGKSLWELVVEQFEDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELR 119
LV+IL+ AA ISF LA GE +TAF+EP VILLIL ANA VGV E NAE A+E L+
Sbjct: 61 LVRILLLAACISFVLAWFEEGEETVTAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V R S+ + A ++VPGDIVEV VG K+PAD+R++ + S LRVDQ+IL
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSML 237
TGES SV K D + AV QDK N+LFSGT + AG+A +V G +T +G IRD M
Sbjct: 181 TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAVGIVATTGVSTEIGKIRDQMA 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
TE + TPL++KLDEFG L+KVI+ ICV VW++NIGHF DP HGG + RGAI+YFKIAV
Sbjct: 241 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWFRGAIYYFKIAV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQQGPI--IAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCS 414
MSV K+ ++ V G + + E+ +TG+TYAPEG V + + Q L+ +A
Sbjct: 361 MSVCKMFIIDKVD-GDVCSLNEFSITGSTYAPEGEVLKND--KPVRAGQYDGLVELATIC 417
Query: 415 ALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCN 474
ALCN+S L +N KG YEK+GEATE AL L EK+ + + + LSK ERA+ CN
Sbjct: 418 ALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNV-----FNTEVRSLSKVERANACN 472
Query: 475 HHWEIEFKKVSILEFSRDRKMMSVLCSHKQMC------VMFSKGAPESVLSRCTNILCND 528
KK LEFSRDRK MSV CS + MF KGAPE V+ RC +
Sbjct: 473 SVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGT 532
Query: 529 NGFIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EKD 580
VP+T ++ ++ S + G++ LRCLALA + P R+ + DD E D
Sbjct: 533 TR--VPLTGPVKEKIMSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSAKFMEYEMD 590
Query: 581 LTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640
LTF+G+VGMLDPPR+EV ++ C AGIRVI++TGDNK TA +IC +IG F +
Sbjct: 591 LTFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFSENEEVTD 650
Query: 641 RSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPA 700
R+YT EF++LP +Q A + F RVEPSHK +VE LQ+ +E+ AMTGDGVNDAPA
Sbjct: 651 RAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPA 710
Query: 701 LKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760
LKKA+IGIAMGSGTAVAK+AS+MVLADDNF+TIVAAV EGRAIYNN KQFIRY+ISSN+G
Sbjct: 711 LKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVG 770
Query: 761 EVVCIFVAAVLGIPDTLAPVSLISVNI 787
EVVCIF+ A LG+P+ L PV L+ VN+
Sbjct: 771 EVVCIFLTAALGLPEALIPVQLLWVNL 797
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P04191|AT2A1_RABIT Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Oryctolagus cuniculus GN=ATP2A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/807 (55%), Positives = 560/807 (69%), Gaps = 30/807 (3%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A+++S E L +FGV T GLT QV RH+ YG N LP E+ + W+LV++QF+DL
Sbjct: 1 MEAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELR 119
LV+IL+ AA ISF LA GE +TAF+EP VILLIL ANA VGV E NAE A+E L+
Sbjct: 61 LVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V R S+ + A ++VPGDIVEV VG K+PAD+R++ + S LRVDQ+IL
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSML 237
TGES SV K + + AV QDK N+LFSGT + AG+A +V G +T +G IRD M
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMA 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
TE + TPL++KLDEFG L+KVI+ ICV VW++NIGHF DP HGG ++RGAI+YFKIAV
Sbjct: 241 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQQGPI--IAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCS 414
MSV K+ ++ V G + E+ +TG+TYAPEG V + + Q L+ +A
Sbjct: 361 MSVCKMFIIDKVD-GDFCSLNEFSITGSTYAPEGEVLKND--KPIRSGQFDGLVELATIC 417
Query: 415 ALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCN 474
ALCN+S L +N KG YEK+GEATE AL L EK+ + + + LSK ERA+ CN
Sbjct: 418 ALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNV-----FNTEVRNLSKVERANACN 472
Query: 475 HHWEIEFKKVSILEFSRDRKMMSVLCSHKQMC------VMFSKGAPESVLSRCTNILCND 528
KK LEFSRDRK MSV CS + MF KGAPE V+ RC +
Sbjct: 473 SVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGT 532
Query: 529 NGFIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EKD 580
VPMT ++ ++ S + G++ LRCLALA + P R+ + DD E D
Sbjct: 533 TR--VPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETD 590
Query: 581 LTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640
LTF+G+VGMLDPPR+EV ++ C AGIRVI++TGDNK TA +IC +IG F +
Sbjct: 591 LTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVAD 650
Query: 641 RSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPA 700
R+YT EF++LP +Q A + F RVEPSHK +VE LQ+ +E+ AMTGDGVNDAPA
Sbjct: 651 RAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPA 710
Query: 701 LKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760
LKKA+IGIAMGSGTAVAK+AS+MVLADDNF+TIVAAV EGRAIYNN KQFIRY+ISSN+G
Sbjct: 711 LKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVG 770
Query: 761 EVVCIFVAAVLGIPDTLAPVSLISVNI 787
EVVCIF+ A LG+P+ L PV L+ VN+
Sbjct: 771 EVVCIFLTAALGLPEALIPVQLLWVNL 797
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Oryctolagus cuniculus (taxid: 9986) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q0VCY0|AT2A1_BOVIN Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Bos taurus GN=ATP2A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/805 (55%), Positives = 559/805 (69%), Gaps = 27/805 (3%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A++++ E L +FGV T GLT QV RH+ YG N LP E+ + W+LVL+QF+DL
Sbjct: 1 MEAAHSKTTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVLEQFEDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELR 119
LV+IL+ AA ISF LA GE +TAF+EP VILLIL ANA VGV E NAE A+E L+
Sbjct: 61 LVRILLLAACISFVLAWFEEGEETVTAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V R S+ + A ++VPGDIVEV VG K+PAD+R++ + S LRVDQ+IL
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILTIKSTTLRVDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSML 237
TGES SV K + + AV QDK N+LFSGT + AG+A +V G T +G IRD M
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKAIGIVATTGVGTEIGKIRDQMA 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
TE + TPL++KLDEFG L+KVI+ ICV VW++NIGHF DP HGG ++RGAI+YFKIAV
Sbjct: 241 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQQGP-IIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSA 415
MSV K+ ++ + ++ E+ VTG+TYAPEG V + + Q L+ +A A
Sbjct: 361 MSVCKMFIIDRIDGDLCLLNEFSVTGSTYAPEGEVLKND--KPVRSGQYDGLVELATICA 418
Query: 416 LCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475
LCN+S L +N KG YEK+GEATE AL L EK+ + + + LSK ERA+ CN
Sbjct: 419 LCNDSSLDFNETKGIYEKVGEATETALTTLVEKMNV-----FNTEVRNLSKVERANACNS 473
Query: 476 HWEIEFKKVSILEFSRDRKMMSVLCSHKQMCV-----MFSKGAPESVLSRCTNILCNDNG 530
KK LEFSRDRK MSV CS + MF KGAPE V+ RC +
Sbjct: 474 VIRQLMKKEFTLEFSRDRKSMSVYCSPAKSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTR 533
Query: 531 FIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EKDLT 582
VPMT ++ ++ S + G++ LRCLALA + P R+ + DD E DLT
Sbjct: 534 --VPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSTKFMEYETDLT 591
Query: 583 FIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRS 642
F+G+VGMLDPPR+EV ++ C AGIRVI++TGDNK TA +IC +IG F D R+
Sbjct: 592 FVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEDVADRA 651
Query: 643 YTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALK 702
YT EF++LP +Q A + F RVEP+HK +VE LQ+ +E+ AMTGDGVNDAPALK
Sbjct: 652 YTGREFDDLPLAEQREACRRACCFARVEPTHKSKIVEYLQSFDEITAMTGDGVNDAPALK 711
Query: 703 KADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEV 762
KA+IGIAMGSGTAVAK+AS+MVLADDNF+TIVAAV EGRAIYNN KQFIRY+ISSN+GEV
Sbjct: 712 KAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEV 771
Query: 763 VCIFVAAVLGIPDTLAPVSLISVNI 787
VCIF+ A LG+P+ L PV L+ VN+
Sbjct: 772 VCIFLTAALGLPEALIPVQLLWVNL 796
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O14983|AT2A1_HUMAN Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Homo sapiens GN=ATP2A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/807 (55%), Positives = 559/807 (69%), Gaps = 30/807 (3%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A+A++ E L +FGV T GLT QV R++ YG N LP E+ W+LV++QF+DL
Sbjct: 1 MEAAHAKTTEECLAYFGVSETTGLTPDQVKRNLEKYGLNELPAEEGKTLWELVIEQFEDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELR 119
LV+IL+ AA ISF LA GE +TAF+EP VILLIL ANA VGV E NAE A+E L+
Sbjct: 61 LVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V R S+ + A ++VPGDIVEV VG K+PAD+R++ + S LRVDQ+IL
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILAIKSTTLRVDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSML 237
TGES SV K + + AV QDK N+LFSGT + AG+A +V G T +G IRD M
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVGTEIGKIRDQMA 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
TE + TPL++KLDEFG L+KVI+ ICV VW++NIGHF DP HGG + RGAI+YFKIAV
Sbjct: 241 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWFRGAIYYFKIAV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQQGPI--IAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCS 414
MSV K+ ++ V G I + E+ +TG+TYAPEG V + + P Q L+ +A
Sbjct: 361 MSVCKMFIIDKVD-GDICLLNEFSITGSTYAPEGEVLKND--KPVRPGQYDGLVELATIC 417
Query: 415 ALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCN 474
ALCN+S L +N KG YEK+GEATE AL L EK+ + D + LSK ERA+ CN
Sbjct: 418 ALCNDSSLDFNEAKGVYEKVGEATETALTTLVEKMNVFNTD-----VRSLSKVERANACN 472
Query: 475 HHWEIEFKKVSILEFSRDRKMMSVLCSHKQMC------VMFSKGAPESVLSRCTNILCND 528
KK LEFSRDRK MSV CS + MF KGAPE V+ RC +
Sbjct: 473 SVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGT 532
Query: 529 NGFIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EKD 580
VP+T ++ ++ + + G++ LRCLALA + P R+ + DD E D
Sbjct: 533 TR--VPLTGPVKEKIMAVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSARFLEYETD 590
Query: 581 LTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640
LTF+G+VGMLDPPR+EV ++ C AGIRVI++TGDNK TA +IC +IG F +
Sbjct: 591 LTFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVAD 650
Query: 641 RSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPA 700
R+YT EF++LP +Q A + F RVEPSHK +VE LQ+ +E+ AMTGDGVNDAPA
Sbjct: 651 RAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPA 710
Query: 701 LKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760
LKKA+IGIAMGSGTAVAK+AS+MVLADDNF+TIVAAV EGRAIYNN KQFIRY+ISSN+G
Sbjct: 711 LKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVG 770
Query: 761 EVVCIFVAAVLGIPDTLAPVSLISVNI 787
EVVCIF+ A LG+P+ L PV L+ VN+
Sbjct: 771 EVVCIFLTAALGLPEALIPVQLLWVNL 797
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P22700|ATC1_DROME Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Drosophila melanogaster GN=Ca-P60A PE=1 SV=2 | Back alignment and function description |
|---|
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/806 (54%), Positives = 569/806 (70%), Gaps = 28/806 (3%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
MED ++++V + L+FFG DP +GLT Q+ + + YG N LP E+ + W+LVL+QFDDL
Sbjct: 1 MEDGHSKTVEQSLNFFGTDPERGLTLDQIKANQKKYGPNELPTEEGKSIWQLVLEQFDDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELR 119
LVKIL+ AA+ISF LAL E TAF+EP VILLIL ANA VGV E NAE A+E L+
Sbjct: 61 LVKILLLAAIISFVLALFEEHEETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V+R I + A E+VPGD+VEV+VG KIPAD+R+ + S LR+DQ+IL
Sbjct: 121 EYEPEMGKVVRQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRITHIYSTTLRIDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSML 237
TGES SV K D+I AV QDK NILFSGT V AG+AR VV+G G +TA+G IR M
Sbjct: 181 TGESVSVIKHTDAIPDPRAVNQDKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMS 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
+TE+ TPL++KLDEFG L+KVI+ ICV VW +NIGHF DP+HGG +++GAI+YFKIAV
Sbjct: 241 ETEEIKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKIAV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQ-QGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSA 415
MSV+++ + V+ E+ +TG+TY P G VF +G +++ A L ++
Sbjct: 361 MSVSRMFIFDKVEGNDSSFLEFEMTGSTYEPIGEVF-LNGQRIK-AADYDTLQELSTICI 418
Query: 416 LCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475
+CN+S + YN K +EK+GEATE AL VLAEK L F S L+ + A C
Sbjct: 419 MCNDSAIDYNEFKQAFEKVGEATETALIVLAEK--LNSFSVNKSGLD---RRSAAIACRG 473
Query: 476 HWEIEFKKVSILEFSRDRKMMSVLCSHKQMC------VMFSKGAPESVLSRCTNILCNDN 529
E ++KK LEFSRDRK MS C+ + +F KGAPE VL RCT+
Sbjct: 474 EIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGTGPKLFVKGAPEGVLERCTHARVGTT 533
Query: 530 GFIVPMTANIRAELESRLNSLA-GKEALRCLALAL-------KQMPINRQTLSYDDEKDL 581
VP+T+ ++A++ + G++ LRCLALA+ +M + T Y E +L
Sbjct: 534 K--VPLTSALKAKILALTGQYGTGRDTLRCLALAVADSPMKPDEMDLGDSTKFYQYEVNL 591
Query: 582 TFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGR 641
TF+G+VGMLDPPR+EV ++++ C AGIRVIV+TGDNK+TAE+IC +IG F D G+
Sbjct: 592 TFVGVVGMLDPPRKEVFDSIVRCRAAGIRVIVITGDNKATAEAICRRIGVFAEDEDTTGK 651
Query: 642 SYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPAL 701
SY+ EF++L +Q A+ LF+RVEP HK +VE LQ+ NE+ AMTGDGVNDAPAL
Sbjct: 652 SYSGREFDDLSPTEQKAAVARSRLFSRVEPQHKSKIVEFLQSMNEISAMTGDGVNDAPAL 711
Query: 702 KKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGE 761
KKA+IGIAMGSGTAVAKSA++MVLADDNF++IV+AV EGRAIYNN KQFIRY+ISSNIGE
Sbjct: 712 KKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNIGE 771
Query: 762 VVCIFVAAVLGIPDTLAPVSLISVNI 787
VV IF+ A LG+P+ L PV L+ VN+
Sbjct: 772 VVSIFLTAALGLPEALIPVQLLWVNL 797
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Drosophila melanogaster (taxid: 7227) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q292Q0|ATC1_DROPS Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Drosophila pseudoobscura pseudoobscura GN=Ca-P60A PE=3 SV=2 | Back alignment and function description |
|---|
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/806 (54%), Positives = 563/806 (69%), Gaps = 28/806 (3%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
MED ++++V + L+FFG D +GLT Q+ + YG N LP E+ + W+LVL+QFDDL
Sbjct: 1 MEDGHSKTVEQSLNFFGTDGERGLTLDQIKTNQAKYGPNELPTEEGKSIWQLVLEQFDDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELR 119
LVKIL+ AA+ISF LAL E TAF+EP VILLIL ANA VGV E NAE A+E L+
Sbjct: 61 LVKILLLAAIISFVLALFEEHEETFTAFVEPLVILLILIANAVVGVWQERNAESAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V+R I + A E+VPGD+VEV+VG KIPAD+R+ + S +R+DQ+IL
Sbjct: 121 EYEPEMGKVIRQDKSGIQKVRAKEIVPGDLVEVSVGDKIPADIRLTHIYSTTIRIDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSML 237
TGES SV K D+I AV QDK NILFSGT V AG+AR VV+G G +TA+G IR M
Sbjct: 181 TGESVSVIKHTDAIPDPRAVNQDKKNILFSGTNVAAGKARGVVIGTGLSTAIGKIRTEMS 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
+TE+ TPL++KLDEFG L+KVI+ ICV VW +NIGHF DP+HGG +++GAI+YFKIAV
Sbjct: 241 ETEEIKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFNDPAHGGSWIKGAIYYFKIAV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQ-QGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSA 415
MSV+++ + V+ E+ +TG+TY P G +F G Q + L +A
Sbjct: 361 MSVSRMLIFEKVEGNDSSFLEFELTGSTYEPIGELF--LGGQRVKASDYEALQELATVCI 418
Query: 416 LCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475
+CN+S + YN K +EK+GEATE AL VLAEK L F S L+ + A
Sbjct: 419 MCNDSAIDYNEFKAAFEKVGEATETALIVLAEK--LNAFSVNKSGLD---RRSNAIAARG 473
Query: 476 HWEIEFKKVSILEFSRDRKMMSVLCSHKQMC------VMFSKGAPESVLSRCTNILCNDN 529
E ++KK LEFSRDRK MS C+ + +F KGAPE VL RCT+ +
Sbjct: 474 EIETKWKKEFTLEFSRDRKSMSSYCTPLKASRLGTGPKLFVKGAPEGVLDRCTHARVGTS 533
Query: 530 GFIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLS-------YDDEKDL 581
VP+T+ ++A++ + G++ LRCLALA+ PI + + Y E +L
Sbjct: 534 K--VPLTSALKAKILALTGQYGTGRDTLRCLALAVADSPIRPEDMDLGDSTKFYQYEVNL 591
Query: 582 TFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGR 641
TF+G+VGMLDPPR+EV +A++ C AGIRVIV+TGDNK+TAE+IC +IG F D G+
Sbjct: 592 TFVGVVGMLDPPRKEVFDAIVRCRAAGIRVIVITGDNKATAEAICRRIGVFTEEEDTTGK 651
Query: 642 SYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPAL 701
SY+ EF++L +Q A+ LF+RVEP HK +VE LQ NE+ AMTGDGVNDAPAL
Sbjct: 652 SYSGREFDDLSIAEQKAAVARSRLFSRVEPQHKSKIVEYLQGMNEISAMTGDGVNDAPAL 711
Query: 702 KKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGE 761
KKA+IGIAMGSGTAVAKSA++MVLADDNF++IV+AV EGRAIYNN KQFIRY+ISSNIGE
Sbjct: 712 KKAEIGIAMGSGTAVAKSAAEMVLADDNFSSIVSAVEEGRAIYNNMKQFIRYLISSNIGE 771
Query: 762 VVCIFVAAVLGIPDTLAPVSLISVNI 787
VV IF+ A LG+P+ L PV L+ VN+
Sbjct: 772 VVSIFLTAALGLPEALIPVQLLWVNL 797
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Drosophila pseudoobscura pseudoobscura (taxid: 46245) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 787 | ||||||
| 225458876 | 999 | PREDICTED: calcium-transporting ATPase 3 | 1.0 | 0.787 | 0.878 | 0.0 | |
| 302142178 | 1000 | unnamed protein product [Vitis vinifera] | 1.0 | 0.787 | 0.878 | 0.0 | |
| 356510586 | 1001 | PREDICTED: calcium-transporting ATPase 3 | 1.0 | 0.786 | 0.866 | 0.0 | |
| 356510588 | 1015 | PREDICTED: calcium-transporting ATPase 3 | 1.0 | 0.775 | 0.851 | 0.0 | |
| 255538026 | 987 | cation-transporting atpase, putative [Ri | 0.982 | 0.783 | 0.865 | 0.0 | |
| 449482739 | 1020 | PREDICTED: LOW QUALITY PROTEIN: calcium- | 1.0 | 0.771 | 0.829 | 0.0 | |
| 224129832 | 1015 | endoplasmic reticulum [ER]-type calcium | 1.0 | 0.775 | 0.865 | 0.0 | |
| 18391113 | 998 | Ca2+-transporting ATPase [Arabidopsis th | 0.998 | 0.787 | 0.844 | 0.0 | |
| 4185855 | 998 | Ca2+-ATPase [Arabidopsis thaliana] | 0.998 | 0.787 | 0.842 | 0.0 | |
| 49659964 | 997 | ECA3 [Arabidopsis thaliana] | 0.997 | 0.787 | 0.841 | 0.0 |
| >gi|225458876|ref|XP_002285405.1| PREDICTED: calcium-transporting ATPase 3, endoplasmic reticulum-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1431 bits (3703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 691/787 (87%), Positives = 749/787 (95%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
MEDAYARSV EVL+FF VDPTKGLTDSQ++++ RIYG+NVLP+E+ T FWKLVLKQFDDL
Sbjct: 1 MEDAYARSVAEVLEFFEVDPTKGLTDSQISKYARIYGRNVLPEERSTPFWKLVLKQFDDL 60
Query: 61 LVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRA 120
LVKILIAAA++SF LALINGETGL AFLEPSVIL+ILAANAAVGVITETNAEKALEELRA
Sbjct: 61 LVKILIAAALVSFVLALINGETGLIAFLEPSVILMILAANAAVGVITETNAEKALEELRA 120
Query: 121 YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
YQADIATVLRNGCFSILPA +LVPGDIVEV+VGCKIPADMRMIEMLSNQLRVDQAILTGE
Sbjct: 121 YQADIATVLRNGCFSILPATDLVPGDIVEVSVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
Query: 181 SCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240
SCSVEKELDS +ATNAVYQDKTNILFSGTVVVAGRA+AVVVGVGANTAMG+IRDSML+TE
Sbjct: 181 SCSVEKELDSTVATNAVYQDKTNILFSGTVVVAGRAKAVVVGVGANTAMGNIRDSMLRTE 240
Query: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
DEVTPLKKKLDEFGTFLAKVIAGIC+LVWIVNIGHFRDPSHGG LRGAIHYFKIAVALAV
Sbjct: 241 DEVTPLKKKLDEFGTFLAKVIAGICMLVWIVNIGHFRDPSHGGLLRGAIHYFKIAVALAV 300
Query: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSV+
Sbjct: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVS 360
Query: 361 KICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNES 420
KICV HSV GP+ AEY ++GTTY+PEGVV DS+GIQL+FPAQLPCLLHIA CSALCNES
Sbjct: 361 KICVFHSVHHGPVTAEYSISGTTYSPEGVVLDSAGIQLDFPAQLPCLLHIAMCSALCNES 420
Query: 421 VLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIE 480
+LQYNPDKG+YEKIGEATEVALRVLAEKVGLPGF+SMPSALNMLSKHERASYCN +WE +
Sbjct: 421 ILQYNPDKGDYEKIGEATEVALRVLAEKVGLPGFNSMPSALNMLSKHERASYCNRYWENQ 480
Query: 481 FKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIR 540
FKKV++L+FSRDRKMMSVLCS KQ+ +MFSKGAPES++SRCTNILCND+G VP+TAN+R
Sbjct: 481 FKKVALLDFSRDRKMMSVLCSRKQLEIMFSKGAPESIISRCTNILCNDDGSTVPLTANLR 540
Query: 541 AELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNA 600
ELE+R S A E LRCLALALK+MP+ +QTLS++DE+DLTFIGLVGMLDPPREEV+NA
Sbjct: 541 TELEARFRSFAETETLRCLALALKRMPMGQQTLSFNDEQDLTFIGLVGMLDPPREEVRNA 600
Query: 601 MLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660
M+SCMTAGIRVIVVTGDNKSTAES+C KIGAFDHLVDF G SYTASEFEELPA+QQ +AL
Sbjct: 601 MISCMTAGIRVIVVTGDNKSTAESVCRKIGAFDHLVDFSGHSYTASEFEELPALQQALAL 660
Query: 661 QHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 720
Q MALFTRVEPSHKRMLVEALQ+QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA
Sbjct: 661 QRMALFTRVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 720
Query: 721 SDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 780
SDMVLADDNFA+IVAA+AEGRAIYNNTKQFIRYMISSNIGEVVCIFVAA+LGIPDTLAPV
Sbjct: 721 SDMVLADDNFASIVAAIAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAMLGIPDTLAPV 780
Query: 781 SLISVNI 787
L+ VN+
Sbjct: 781 QLLWVNL 787
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302142178|emb|CBI19381.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1430 bits (3701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 691/787 (87%), Positives = 749/787 (95%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
MEDAYARSV EVL+FF VDPTKGLTDSQ++++ RIYG+NVLP+E+ T FWKLVLKQFDDL
Sbjct: 1 MEDAYARSVAEVLEFFEVDPTKGLTDSQISKYARIYGRNVLPEERSTPFWKLVLKQFDDL 60
Query: 61 LVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRA 120
LVKILIAAA++SF LALINGETGL AFLEPSVIL+ILAANAAVGVITETNAEKALEELRA
Sbjct: 61 LVKILIAAALVSFVLALINGETGLIAFLEPSVILMILAANAAVGVITETNAEKALEELRA 120
Query: 121 YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
YQADIATVLRNGCFSILPA +LVPGDIVEV+VGCKIPADMRMIEMLSNQLRVDQAILTGE
Sbjct: 121 YQADIATVLRNGCFSILPATDLVPGDIVEVSVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
Query: 181 SCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240
SCSVEKELDS +ATNAVYQDKTNILFSGTVVVAGRA+AVVVGVGANTAMG+IRDSML+TE
Sbjct: 181 SCSVEKELDSTVATNAVYQDKTNILFSGTVVVAGRAKAVVVGVGANTAMGNIRDSMLRTE 240
Query: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
DEVTPLKKKLDEFGTFLAKVIAGIC+LVWIVNIGHFRDPSHGG LRGAIHYFKIAVALAV
Sbjct: 241 DEVTPLKKKLDEFGTFLAKVIAGICMLVWIVNIGHFRDPSHGGLLRGAIHYFKIAVALAV 300
Query: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSV+
Sbjct: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVS 360
Query: 361 KICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNES 420
KICV HSV GP+ AEY ++GTTY+PEGVV DS+GIQL+FPAQLPCLLHIA CSALCNES
Sbjct: 361 KICVFHSVHHGPVTAEYSISGTTYSPEGVVLDSAGIQLDFPAQLPCLLHIAMCSALCNES 420
Query: 421 VLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIE 480
+LQYNPDKG+YEKIGEATEVALRVLAEKVGLPGF+SMPSALNMLSKHERASYCN +WE +
Sbjct: 421 ILQYNPDKGDYEKIGEATEVALRVLAEKVGLPGFNSMPSALNMLSKHERASYCNRYWENQ 480
Query: 481 FKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIR 540
FKKV++L+FSRDRKMMSVLCS KQ+ +MFSKGAPES++SRCTNILCND+G VP+TAN+R
Sbjct: 481 FKKVALLDFSRDRKMMSVLCSRKQLEIMFSKGAPESIISRCTNILCNDDGSTVPLTANLR 540
Query: 541 AELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNA 600
ELE+R S A E LRCLALALK+MP+ +QTLS++DE+DLTFIGLVGMLDPPREEV+NA
Sbjct: 541 TELEARFRSFAETETLRCLALALKRMPMGQQTLSFNDEQDLTFIGLVGMLDPPREEVRNA 600
Query: 601 MLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660
M+SCMTAGIRVIVVTGDNKSTAES+C KIGAFDHLVDF G SYTASEFEELPA+QQ +AL
Sbjct: 601 MISCMTAGIRVIVVTGDNKSTAESVCRKIGAFDHLVDFSGHSYTASEFEELPALQQALAL 660
Query: 661 QHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 720
Q MALFTRVEPSHKRMLVEALQ+QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA
Sbjct: 661 QRMALFTRVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 720
Query: 721 SDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 780
SDMVLADDNFA+IVAA+AEGRAIYNNTKQFIRYMISSNIGEVVCIFVAA+LGIPDTLAPV
Sbjct: 721 SDMVLADDNFASIVAAIAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAMLGIPDTLAPV 780
Query: 781 SLISVNI 787
L+ VN+
Sbjct: 781 QLLWVNL 787
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356510586|ref|XP_003524018.1| PREDICTED: calcium-transporting ATPase 3, endoplasmic reticulum-type-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1413 bits (3658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 682/787 (86%), Positives = 746/787 (94%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
MEDA+ARS+ EVLDFFGVDPTKGL+D++V +H R+YGKNVL +++R FWK+VLKQFDDL
Sbjct: 1 MEDAFARSIPEVLDFFGVDPTKGLSDAEVVQHARLYGKNVLAEDQRVPFWKMVLKQFDDL 60
Query: 61 LVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRA 120
LVKILIAAA+ISF LALINGETGL AFLEPSVIL+ILAANAAVGVITETNAEKALEELRA
Sbjct: 61 LVKILIAAALISFILALINGETGLMAFLEPSVILMILAANAAVGVITETNAEKALEELRA 120
Query: 121 YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
YQAD+ATVLRNGCFSILPA ELVPGDIVEV+VGCKIPADMRMIEMLSNQ+RVDQAILTGE
Sbjct: 121 YQADVATVLRNGCFSILPATELVPGDIVEVSVGCKIPADMRMIEMLSNQVRVDQAILTGE 180
Query: 181 SCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240
S SVEKEL + TNAVYQDKTNILFSGTV+VAGRARAVVVGVG NTAMGSIRDSML+TE
Sbjct: 181 SSSVEKELKTTTTTNAVYQDKTNILFSGTVMVAGRARAVVVGVGPNTAMGSIRDSMLRTE 240
Query: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV
Sbjct: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
Query: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
AAIPEGLPAVVTTCLALGTKRMA+LNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA
Sbjct: 301 AAIPEGLPAVVTTCLALGTKRMAKLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
Query: 361 KICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNES 420
K+CVV S ++GP+++EY V+GTTYAPEG++FDS+G+QL+FPAQLPCLLH+A CSALCNES
Sbjct: 361 KVCVVESAKRGPVVSEYSVSGTTYAPEGIIFDSTGLQLDFPAQLPCLLHMAMCSALCNES 420
Query: 421 VLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIE 480
LQYNPDKGNYEKIGE+TEVALRVLAEKVGLPGF+SMPS+LNML+KHERASYCNH+WE +
Sbjct: 421 TLQYNPDKGNYEKIGESTEVALRVLAEKVGLPGFNSMPSSLNMLTKHERASYCNHYWEEQ 480
Query: 481 FKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIR 540
F+K+ +LEFSRDRKMMSVLCS QM V+FSKGAPES++SRCT+ILCND+G IV +TA+IR
Sbjct: 481 FRKIHVLEFSRDRKMMSVLCSRNQMHVLFSKGAPESIISRCTSILCNDDGSIVSLTADIR 540
Query: 541 AELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNA 600
AEL+SR +S AGKE LRCLALALK MP +Q+LS+DDEKDLTFIGLVGMLDPPR+EV+NA
Sbjct: 541 AELDSRFHSFAGKETLRCLALALKWMPSTQQSLSFDDEKDLTFIGLVGMLDPPRDEVRNA 600
Query: 601 MLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660
MLSCMTAGIRVIVVTGDNKSTAES+C KIGAFD L+DF SYTASEFEELPA+QQT+AL
Sbjct: 601 MLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDQLIDFAEHSYTASEFEELPALQQTIAL 660
Query: 661 QHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 720
Q MALFTRVEPSHKRMLVEALQ+QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA
Sbjct: 661 QRMALFTRVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 720
Query: 721 SDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 780
SDMVLADDNFA+IVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV
Sbjct: 721 SDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 780
Query: 781 SLISVNI 787
L+ VN+
Sbjct: 781 QLLWVNL 787
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356510588|ref|XP_003524019.1| PREDICTED: calcium-transporting ATPase 3, endoplasmic reticulum-type-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1403 bits (3631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 682/801 (85%), Positives = 746/801 (93%), Gaps = 14/801 (1%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
MEDA+ARS+ EVLDFFGVDPTKGL+D++V +H R+YGKNVL +++R FWK+VLKQFDDL
Sbjct: 1 MEDAFARSIPEVLDFFGVDPTKGLSDAEVVQHARLYGKNVLAEDQRVPFWKMVLKQFDDL 60
Query: 61 LVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRA 120
LVKILIAAA+ISF LALINGETGL AFLEPSVIL+ILAANAAVGVITETNAEKALEELRA
Sbjct: 61 LVKILIAAALISFILALINGETGLMAFLEPSVILMILAANAAVGVITETNAEKALEELRA 120
Query: 121 YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
YQAD+ATVLRNGCFSILPA ELVPGDIVEV+VGCKIPADMRMIEMLSNQ+RVDQAILTGE
Sbjct: 121 YQADVATVLRNGCFSILPATELVPGDIVEVSVGCKIPADMRMIEMLSNQVRVDQAILTGE 180
Query: 181 SCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240
S SVEKEL + TNAVYQDKTNILFSGTV+VAGRARAVVVGVG NTAMGSIRDSML+TE
Sbjct: 181 SSSVEKELKTTTTTNAVYQDKTNILFSGTVMVAGRARAVVVGVGPNTAMGSIRDSMLRTE 240
Query: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV
Sbjct: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
Query: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
AAIPEGLPAVVTTCLALGTKRMA+LNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA
Sbjct: 301 AAIPEGLPAVVTTCLALGTKRMAKLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
Query: 361 KICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNES 420
K+CVV S ++GP+++EY V+GTTYAPEG++FDS+G+QL+FPAQLPCLLH+A CSALCNES
Sbjct: 361 KVCVVESAKRGPVVSEYSVSGTTYAPEGIIFDSTGLQLDFPAQLPCLLHMAMCSALCNES 420
Query: 421 VLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIE 480
LQYNPDKGNYEKIGE+TEVALRVLAEKVGLPGF+SMPS+LNML+KHERASYCNH+WE +
Sbjct: 421 TLQYNPDKGNYEKIGESTEVALRVLAEKVGLPGFNSMPSSLNMLTKHERASYCNHYWEEQ 480
Query: 481 FKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIR 540
F+K+ +LEFSRDRKMMSVLCS QM V+FSKGAPES++SRCT+ILCND+G IV +TA+IR
Sbjct: 481 FRKIHVLEFSRDRKMMSVLCSRNQMHVLFSKGAPESIISRCTSILCNDDGSIVSLTADIR 540
Query: 541 AELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNA 600
AEL+SR +S AGKE LRCLALALK MP +Q+LS+DDEKDLTFIGLVGMLDPPR+EV+NA
Sbjct: 541 AELDSRFHSFAGKETLRCLALALKWMPSTQQSLSFDDEKDLTFIGLVGMLDPPRDEVRNA 600
Query: 601 MLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660
MLSCMTAGIRVIVVTGDNKSTAES+C KIGAFD L+DF SYTASEFEELPA+QQT+AL
Sbjct: 601 MLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDQLIDFAEHSYTASEFEELPALQQTIAL 660
Query: 661 QHMALFT--------------RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI 706
Q MALFT RVEPSHKRMLVEALQ+QNEVVAMTGDGVNDAPALKKADI
Sbjct: 661 QRMALFTRYISLYLSSNILFVRVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADI 720
Query: 707 GIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIF 766
GIAMGSGTAVAKSASDMVLADDNFA+IVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIF
Sbjct: 721 GIAMGSGTAVAKSASDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIF 780
Query: 767 VAAVLGIPDTLAPVSLISVNI 787
VAAVLGIPDTLAPV L+ VN+
Sbjct: 781 VAAVLGIPDTLAPVQLLWVNL 801
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255538026|ref|XP_002510078.1| cation-transporting atpase, putative [Ricinus communis] gi|223550779|gb|EEF52265.1| cation-transporting atpase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1378 bits (3566), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/787 (86%), Positives = 731/787 (92%), Gaps = 14/787 (1%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
MEDAYARSV EVLD+FGVDP KGLTDSQVA + +++GKN P FWKLVLKQFDDL
Sbjct: 1 MEDAYARSVSEVLDYFGVDPAKGLTDSQVALNAKVHGKNGTP------FWKLVLKQFDDL 54
Query: 61 LVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRA 120
LVKILIAAAV+SF LALINGETGLTAFLEP VILLILAANAAVGVITETNAEKALEELRA
Sbjct: 55 LVKILIAAAVVSFVLALINGETGLTAFLEPFVILLILAANAAVGVITETNAEKALEELRA 114
Query: 121 YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
YQADIATVLRNGCFSILPA ELVPGDIVEV+VGCK+PADMRMIEMLS+QLRVDQA+LTGE
Sbjct: 115 YQADIATVLRNGCFSILPATELVPGDIVEVSVGCKVPADMRMIEMLSDQLRVDQALLTGE 174
Query: 181 SCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240
SCSVEKEL S A NAVYQDKTNILFSGTVVVAGRARA+VVGVG+NTAMGSIRDSMLQT+
Sbjct: 175 SCSVEKELKSTTAMNAVYQDKTNILFSGTVVVAGRARAIVVGVGSNTAMGSIRDSMLQTD 234
Query: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
DE TPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV
Sbjct: 235 DEATPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 294
Query: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSV+
Sbjct: 295 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVS 354
Query: 361 KICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNES 420
KICVV S+ P+IAEY V+GTTYAP+G+VFDS+ QLPCLLH+A CSALCNES
Sbjct: 355 KICVVQSLHHHPVIAEYNVSGTTYAPDGIVFDST--------QLPCLLHMAMCSALCNES 406
Query: 421 VLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIE 480
VLQYN DKG+YEKIGE+TEVALRVLAEKVGLPGFDSMPSAL+MLSKHERASYCNH+WE +
Sbjct: 407 VLQYNHDKGHYEKIGESTEVALRVLAEKVGLPGFDSMPSALHMLSKHERASYCNHYWENQ 466
Query: 481 FKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIR 540
FKKVS LEFSRDRKMMSVLCS KQ +MFSKGAPES++SRC+NILCN +G P++A I+
Sbjct: 467 FKKVSALEFSRDRKMMSVLCSRKQTEIMFSKGAPESIISRCSNILCNFDGSTAPLSAAIQ 526
Query: 541 AELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNA 600
E+ESR +SLAGKE LRCLALA+KQMP +Q+LS+DDEKDLTFIGLVGMLDPPREEV++A
Sbjct: 527 DEIESRFHSLAGKETLRCLALAMKQMPTGQQSLSFDDEKDLTFIGLVGMLDPPREEVRSA 586
Query: 601 MLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660
MLSCMTAGIRVIVVTGDNKSTAES+C KIGAFD L DFVGRSYTASEFEELPA+QQT+AL
Sbjct: 587 MLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDDLEDFVGRSYTASEFEELPALQQTMAL 646
Query: 661 QHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 720
Q MALFTRVEP+HKRMLVEALQ+QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA
Sbjct: 647 QRMALFTRVEPAHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 706
Query: 721 SDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 780
SDMVLADDNFA+IVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV
Sbjct: 707 SDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 766
Query: 781 SLISVNI 787
L+ VN+
Sbjct: 767 QLLWVNL 773
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449482739|ref|XP_004156389.1| PREDICTED: LOW QUALITY PROTEIN: calcium-transporting ATPase 3, endoplasmic reticulum-type-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1373 bits (3553), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 667/804 (82%), Positives = 734/804 (91%), Gaps = 17/804 (2%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
MEDAYARS+ EVLDFFGVDP++GLTD QV H ++YGKN++P+EKR FWKLVLKQFDDL
Sbjct: 1 MEDAYARSITEVLDFFGVDPSQGLTDDQVLHHAKLYGKNLVPEEKRAPFWKLVLKQFDDL 60
Query: 61 LVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRA 120
LVKILI AAV+SF LALINGETG+TAFLEPSVIL+ILAANAAVGVITETNAEKAL ELRA
Sbjct: 61 LVKILIVAAVVSFLLALINGETGVTAFLEPSVILMILAANAAVGVITETNAEKALVELRA 120
Query: 121 YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
YQADIATVLRNGCFSILPA +LVPGDIVEV VG KIPADMRMIEM+++QLRVDQAILTGE
Sbjct: 121 YQADIATVLRNGCFSILPATDLVPGDIVEVAVGYKIPADMRMIEMMTSQLRVDQAILTGE 180
Query: 181 SCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240
SCSVEKEL+S A NAVYQDKTNILFSGTVVVAGRARA+VVGVGANTAMG+IRDS+LQT+
Sbjct: 181 SCSVEKELESTRAANAVYQDKTNILFSGTVVVAGRARAIVVGVGANTAMGNIRDSILQTD 240
Query: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
D+VTPLKKKLDEFGTFLAKVIAGIC LVWIVNIGHFRDPSHGG L GAIHYFKIAVALAV
Sbjct: 241 DDVTPLKKKLDEFGTFLAKVIAGICALVWIVNIGHFRDPSHGGVLSGAIHYFKIAVALAV 300
Query: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
AAIPEGLPAVVTTCLALGTKRMARL+AIVRSLPSVETLGCTTVICSDKTGTLTTNMMSV+
Sbjct: 301 AAIPEGLPAVVTTCLALGTKRMARLSAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVS 360
Query: 361 KICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNES 420
KICVVHSV GP ++EY V+GTTYAP+G++FD++G+QLE PAQLPC+LH+A SALCNES
Sbjct: 361 KICVVHSVVHGPQLSEYNVSGTTYAPDGIIFDNTGVQLEIPAQLPCILHMAMGSALCNES 420
Query: 421 VLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIE 480
LQYNPDKG+YEKIGE+TEVALRV AEKVGLPGF SMPSALNMLSKHERASYCNHHWE +
Sbjct: 421 TLQYNPDKGSYEKIGESTEVALRVFAEKVGLPGFTSMPSALNMLSKHERASYCNHHWESQ 480
Query: 481 FKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIR 540
FKK+SIL+FSRDRKMMS+LCS Q ++FSKGAPES++SRC++ILCN++G +T+++R
Sbjct: 481 FKKISILDFSRDRKMMSILCSRNQSHILFSKGAPESIISRCSSILCNEDGSTTVLTSSVR 540
Query: 541 AELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNA 600
ELE+R S AG E LRCLA+A K +P+N+Q+LS+DDEKDLTFIGLVGMLDPPREEV+NA
Sbjct: 541 IELEARFQSFAGNEMLRCLAIAFKLLPLNQQSLSFDDEKDLTFIGLVGMLDPPREEVRNA 600
Query: 601 MLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660
MLSCMTAGIRVIVVTGDNKSTAES+C KIGAFDHLVD G SYTASEFEELPAMQ+T+AL
Sbjct: 601 MLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDHLVDLTGHSYTASEFEELPAMQKTMAL 660
Query: 661 QHMALFT-----------------RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKK 703
Q MALFT RVEPSHKRMLVEALQ+QNEVVAMTGDGVNDAPALKK
Sbjct: 661 QRMALFTRYFGHSCILHIXYSSLFRVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKK 720
Query: 704 ADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVV 763
ADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVV
Sbjct: 721 ADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVV 780
Query: 764 CIFVAAVLGIPDTLAPVSLISVNI 787
CIFVAAVLGIP+TLAPV L+ VN+
Sbjct: 781 CIFVAAVLGIPETLAPVQLLWVNL 804
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224129832|ref|XP_002320682.1| endoplasmic reticulum [ER]-type calcium ATPase [Populus trichocarpa] gi|222861455|gb|EEE98997.1| endoplasmic reticulum [ER]-type calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1370 bits (3546), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 693/801 (86%), Positives = 745/801 (93%), Gaps = 14/801 (1%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
MEDAYARS+ EVLDFFGVDP KGL+DSQVA H +IYGKNVLP+E RT FWKLVLKQFDDL
Sbjct: 1 MEDAYARSITEVLDFFGVDPGKGLSDSQVALHSKIYGKNVLPEETRTPFWKLVLKQFDDL 60
Query: 61 LVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRA 120
LVKILIAAA +S LALINGETGL AFLEP VILLILAANAAVGVITETNAEKALEELRA
Sbjct: 61 LVKILIAAAAVSLVLALINGETGLAAFLEPFVILLILAANAAVGVITETNAEKALEELRA 120
Query: 121 YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
YQADIATVLRNGCFSILPA ELVPGDIVEV+VGCK+PADMRMIEMLSNQLRVDQAILTGE
Sbjct: 121 YQADIATVLRNGCFSILPATELVPGDIVEVSVGCKVPADMRMIEMLSNQLRVDQAILTGE 180
Query: 181 SCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240
SCSVEKEL+S IATNAVYQDKTNI+FSGTVVV GRARAVVVGVGANTAMG+IRDSML+T+
Sbjct: 181 SCSVEKELESTIATNAVYQDKTNIIFSGTVVVVGRARAVVVGVGANTAMGNIRDSMLRTD 240
Query: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
DE TPLKKKLDEFGTFLAKVIAGIC+LVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV
Sbjct: 241 DEATPLKKKLDEFGTFLAKVIAGICILVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
Query: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSV+
Sbjct: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVS 360
Query: 361 KICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNES 420
KIC VHSV +GP IAEY V+GT+YAPEG++F SSG+Q+EFPAQLPCLLHIA CSA+CNES
Sbjct: 361 KICAVHSVHRGPTIAEYSVSGTSYAPEGMIFGSSGLQIEFPAQLPCLLHIAMCSAVCNES 420
Query: 421 VLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIE 480
+LQYNPD+G YEKIGE+TEVALRVLAEKVGLPGFDSMPSAL+ML+KHERASYCN +WE +
Sbjct: 421 ILQYNPDRGIYEKIGESTEVALRVLAEKVGLPGFDSMPSALHMLTKHERASYCNQYWESQ 480
Query: 481 FKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIR 540
FKKVS+LEFSRDRKMMSVLCS KQ +MFSKGAPES++SRC+NILCND+G VP++ +R
Sbjct: 481 FKKVSVLEFSRDRKMMSVLCSRKQTKIMFSKGAPESIVSRCSNILCNDDGSTVPLSVAVR 540
Query: 541 AELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNA 600
ELESR +S AGKE LRCL+LA KQMPI +QTLS++DEKDLTFIGLVGMLDPPREEV+NA
Sbjct: 541 DELESRFHSFAGKETLRCLSLAFKQMPIGQQTLSFEDEKDLTFIGLVGMLDPPREEVRNA 600
Query: 601 MLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660
MLSCMTAGIRVIVVTGDNKSTAES+C+KIGAFDHL DF GRSYTASEFEELPA+QQT+AL
Sbjct: 601 MLSCMTAGIRVIVVTGDNKSTAESLCNKIGAFDHLEDFAGRSYTASEFEELPALQQTLAL 660
Query: 661 QHMALFT--------------RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI 706
Q MALFT RVEPSHKRMLVEALQ+QNEVVAMTGDGVNDAPALKKADI
Sbjct: 661 QRMALFTRHACLVTFSFLCFVRVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADI 720
Query: 707 GIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIF 766
GIAMGSGTAVAKSASDMVLADDNFA+IVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIF
Sbjct: 721 GIAMGSGTAVAKSASDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIF 780
Query: 767 VAAVLGIPDTLAPVSLISVNI 787
VAAVLGIPDTLAPV L+ VN+
Sbjct: 781 VAAVLGIPDTLAPVQLLWVNL 801
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|18391113|ref|NP_563860.1| Ca2+-transporting ATPase [Arabidopsis thaliana] gi|19865112|sp|Q9SY55.3|ECA3_ARATH RecName: Full=Calcium-transporting ATPase 3, endoplasmic reticulum-type; Short=AtECA3 gi|13162529|gb|AAC34328.2| calcium-transporting ATPase, ECA3 [Arabidopsis thaliana] gi|110738280|dbj|BAF01069.1| putative calcium ATPase [Arabidopsis thaliana] gi|156145808|gb|ABU53680.1| endomembrane calcium ATPase 3 [Arabidopsis thaliana] gi|332190424|gb|AEE28545.1| Ca2+-transporting ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1364 bits (3531), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 665/787 (84%), Positives = 723/787 (91%), Gaps = 1/787 (0%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
MEDAYARSV EVLDFFGVDPTKGL+DSQV H R+YG+NVLP+EKRT FWKLVLKQFDDL
Sbjct: 1 MEDAYARSVSEVLDFFGVDPTKGLSDSQVVHHSRLYGRNVLPEEKRTPFWKLVLKQFDDL 60
Query: 61 LVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRA 120
LVKILI AA++SF LAL NGETGLTAFLEP VILLILAANAAVGVITETNAEKALEELRA
Sbjct: 61 LVKILIVAAIVSFVLALANGETGLTAFLEPFVILLILAANAAVGVITETNAEKALEELRA 120
Query: 121 YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
YQA+IATVLRNGCFSILPA ELVPGDIVEV VGCKIPAD+RMIEM SN RVDQAILTGE
Sbjct: 121 YQANIATVLRNGCFSILPATELVPGDIVEVTVGCKIPADLRMIEMSSNTFRVDQAILTGE 180
Query: 181 SCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240
SCSVEK++D + TNAVYQDK NILFSGT VVAGR RAVV+GVG+NTAMGSI DSMLQT+
Sbjct: 181 SCSVEKDVDCTLTTNAVYQDKKNILFSGTDVVAGRGRAVVIGVGSNTAMGSIHDSMLQTD 240
Query: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
DE TPLKKKLDEFG+FLAKVIAGICVLVW+VNIGHF DPSHGGF +GAIHYFKIAVALAV
Sbjct: 241 DEATPLKKKLDEFGSFLAKVIAGICVLVWVVNIGHFSDPSHGGFFKGAIHYFKIAVALAV 300
Query: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
AAIPEGLPAVVTTCLALGTK+MARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSV+
Sbjct: 301 AAIPEGLPAVVTTCLALGTKKMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVS 360
Query: 361 KICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNES 420
KICVV S + GP+I E+ V+GTTYAPEG VFDS+G+QL+ PAQ PCL H+A CS+LCN+S
Sbjct: 361 KICVVQSAEHGPMINEFTVSGTTYAPEGTVFDSNGMQLDLPAQSPCLHHLAMCSSLCNDS 420
Query: 421 VLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIE 480
+LQYNPDK +YEKIGE+TEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH+WE +
Sbjct: 421 ILQYNPDKDSYEKIGESTEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHYWENQ 480
Query: 481 FKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIR 540
FKKV +LEF+RDRKMMSVLCSHKQM VMFSKGAPES+++RC ILCN +G +VP+TA R
Sbjct: 481 FKKVYVLEFTRDRKMMSVLCSHKQMDVMFSKGAPESIIARCNKILCNGDGSVVPLTAAGR 540
Query: 541 AELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNA 600
AELESR S G E LRCLALA K +P +QT+SYD+E DLTFIGLVGMLDPPREEV++A
Sbjct: 541 AELESRFYSF-GDETLRCLALAFKTVPHGQQTISYDNENDLTFIGLVGMLDPPREEVRDA 599
Query: 601 MLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660
ML+CMTAGIRVIVVTGDNKSTAES+C KIGAFD+LVDF G SYTASEFE LPA+QQT+AL
Sbjct: 600 MLACMTAGIRVIVVTGDNKSTAESLCRKIGAFDNLVDFSGMSYTASEFERLPAVQQTLAL 659
Query: 661 QHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 720
+ M LF+RVEPSHKRMLVEALQ QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA
Sbjct: 660 RRMTLFSRVEPSHKRMLVEALQKQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 719
Query: 721 SDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 780
SDMVLADDNFA+IVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV
Sbjct: 720 SDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 779
Query: 781 SLISVNI 787
L+ VN+
Sbjct: 780 QLLWVNL 786
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|4185855|emb|CAA10660.1| Ca2+-ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1359 bits (3518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/787 (84%), Positives = 721/787 (91%), Gaps = 1/787 (0%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
MEDAYARSV EVLDFFGVDPTKGL+DSQV H R+YG+NVLP+EK T FWKLVLKQFDDL
Sbjct: 1 MEDAYARSVSEVLDFFGVDPTKGLSDSQVVHHSRLYGRNVLPEEKGTPFWKLVLKQFDDL 60
Query: 61 LVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRA 120
LVKILI AA++SF LAL NGETGLTAFLEP VILLILAANAAVGVITETNAEKALEELRA
Sbjct: 61 LVKILIVAAIVSFVLALANGETGLTAFLEPFVILLILAANAAVGVITETNAEKALEELRA 120
Query: 121 YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
YQA+IATVLRNGCFSILPA ELVPGDIVEV VGCKIPAD+RMIEM SN RVDQAILTGE
Sbjct: 121 YQANIATVLRNGCFSILPATELVPGDIVEVTVGCKIPADLRMIEMSSNTFRVDQAILTGE 180
Query: 181 SCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240
SCSVEK++D + TNAVYQDK NILFSGT VVAGR RAVV+GVG+NTAMGSI DSMLQT+
Sbjct: 181 SCSVEKDVDCTLTTNAVYQDKKNILFSGTDVVAGRGRAVVIGVGSNTAMGSIHDSMLQTD 240
Query: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
DE TPLKKKLDEFG+FLAKVIAGICVLVW+VNIGHF DPSHGGF +GAIHYFKIAVALAV
Sbjct: 241 DEATPLKKKLDEFGSFLAKVIAGICVLVWVVNIGHFSDPSHGGFFKGAIHYFKIAVALAV 300
Query: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
AAIPEGLPAVVTTCLALGTK+MARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSV+
Sbjct: 301 AAIPEGLPAVVTTCLALGTKKMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVS 360
Query: 361 KICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNES 420
KICVV S + GP+I E+ V+GTTYAPEG VFDS+G+QL+ PAQ PCL H+A CS+LCN+S
Sbjct: 361 KICVVQSAEHGPMINEFTVSGTTYAPEGTVFDSNGMQLDLPAQSPCLHHLAMCSSLCNDS 420
Query: 421 VLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIE 480
+LQYNPDK +YEKIGE+TEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH+WE +
Sbjct: 421 ILQYNPDKDSYEKIGESTEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHYWENQ 480
Query: 481 FKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIR 540
FKKV +LEF+RDRKMMSVLCSHKQM VMFSKGAPES+++RC ILCN +G +VP+TA R
Sbjct: 481 FKKVYVLEFTRDRKMMSVLCSHKQMDVMFSKGAPESIIARCNKILCNGDGSVVPLTAAGR 540
Query: 541 AELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNA 600
AELESR G E LRCLALA K +P +QT+SYD+E DLTFIGLVGMLDPPREEV++A
Sbjct: 541 AELESRFYRF-GDETLRCLALAFKTVPHGQQTISYDNENDLTFIGLVGMLDPPREEVRDA 599
Query: 601 MLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660
ML+CMTAGIRVIVVTGDNKSTAES+C KIGAFD+LVDF G SYTASEFE LPA+QQT+AL
Sbjct: 600 MLACMTAGIRVIVVTGDNKSTAESLCRKIGAFDNLVDFSGMSYTASEFERLPAVQQTLAL 659
Query: 661 QHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 720
+ M LF+RVEPSHKRMLVEALQ QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA
Sbjct: 660 RRMTLFSRVEPSHKRMLVEALQKQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 719
Query: 721 SDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 780
SDMVLADDNFA+IVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV
Sbjct: 720 SDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 779
Query: 781 SLISVNI 787
L+ VN+
Sbjct: 780 QLLWVNL 786
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|49659964|gb|AAT68271.1| ECA3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1357 bits (3513), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 662/787 (84%), Positives = 721/787 (91%), Gaps = 2/787 (0%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
MEDAYARSV EVLDFFGVDPTKGL+DSQV H R+YG+NVLP+EKRT FWKLVLKQFDDL
Sbjct: 1 MEDAYARSVSEVLDFFGVDPTKGLSDSQVVHHSRLYGRNVLPEEKRTPFWKLVLKQFDDL 60
Query: 61 LVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRA 120
LVKILI AA++SF LAL NGETGLTAFLEP VILLILAANAAVGVITETNAEKALEELRA
Sbjct: 61 LVKILIVAAIVSFVLALANGETGLTAFLEPFVILLILAANAAVGVITETNAEKALEELRA 120
Query: 121 YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
YQA+IATVLRNGCFSILPA ELVPGDIVEV VGCKIPAD+RMIEM SN RVDQAILTGE
Sbjct: 121 YQANIATVLRNGCFSILPATELVPGDIVEVTVGCKIPADLRMIEMSSNTFRVDQAILTGE 180
Query: 181 SCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240
SCSVEK++D + TNAVYQ+K NILFSGT VVAGR RAVV+GVG+NTAMGSI DSMLQT+
Sbjct: 181 SCSVEKDVDCTLTTNAVYQNKKNILFSGTDVVAGRGRAVVIGVGSNTAMGSIHDSMLQTD 240
Query: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
DE TPLKKKLDEFG+FLAKVIAGICVLVW+VNIGHF DPSHGGF +GAIHYFKIAVALAV
Sbjct: 241 DEATPLKKKLDEFGSFLAKVIAGICVLVWVVNIGHFSDPSHGGFFKGAIHYFKIAVALAV 300
Query: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
AAIPEGLPAVVTTCLALGTK+MARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSV+
Sbjct: 301 AAIPEGLPAVVTTCLALGTKKMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVS 360
Query: 361 KICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNES 420
KICVV S + GP+I E+ V+GTTYAPEG VFDS+G+QL+ PAQ PCL H+ CS+LCN+S
Sbjct: 361 KICVVQSAEHGPMINEFTVSGTTYAPEGTVFDSNGMQLDLPAQSPCLHHLTMCSSLCNDS 420
Query: 421 VLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIE 480
+LQYNPDK +YEKIGE+TEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH+WE +
Sbjct: 421 ILQYNPDKDSYEKIGESTEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHYWENQ 480
Query: 481 FKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIR 540
FKKV +LEF+RDRKMMSVLCSHKQM VMFSKGAPES+++RC ILCN +G +VP+TA R
Sbjct: 481 FKKVYVLEFTRDRKMMSVLCSHKQMDVMFSKGAPESIIARCNKILCNGDGSVVPLTAAGR 540
Query: 541 AELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNA 600
AELESR S G E LRCLALA K +P +QT+SYD+E DLTFIGL GMLDPPREEV++A
Sbjct: 541 AELESRFYSF-GDETLRCLALAFKTVPHGQQTISYDNENDLTFIGL-GMLDPPREEVRDA 598
Query: 601 MLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660
ML+CMTAGIRVIVVTGDNKSTAES+C KIGAFD+LVDF G SYTASEFE LPA+QQT+AL
Sbjct: 599 MLACMTAGIRVIVVTGDNKSTAESLCRKIGAFDNLVDFSGMSYTASEFERLPAVQQTLAL 658
Query: 661 QHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 720
+ M LF+RVEPSHKRMLVEALQ QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA
Sbjct: 659 RRMTLFSRVEPSHKRMLVEALQKQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 718
Query: 721 SDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 780
SDMVLADDNFA+IVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV
Sbjct: 719 SDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 778
Query: 781 SLISVNI 787
L+ VN+
Sbjct: 779 QLLWVNL 785
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 787 | ||||||
| TAIR|locus:2201916 | 998 | ECA3 "endoplasmic reticulum-ty | 0.998 | 0.787 | 0.810 | 0.0 | |
| UNIPROTKB|F1RFH9 | 993 | ATP2A1 "Uncharacterized protei | 0.987 | 0.782 | 0.537 | 4.1e-207 | |
| RGD|621293 | 994 | Atp2a1 "ATPase, Ca++ transport | 0.987 | 0.781 | 0.535 | 5.2e-207 | |
| MGI|MGI:105058 | 994 | Atp2a1 "ATPase, Ca++ transport | 0.987 | 0.781 | 0.534 | 6.7e-207 | |
| UNIPROTKB|E2RRB2 | 1000 | ATP2A1 "Uncharacterized protei | 0.988 | 0.778 | 0.532 | 1.1e-206 | |
| UNIPROTKB|J9P9P2 | 993 | ATP2A1 "Uncharacterized protei | 0.988 | 0.783 | 0.532 | 1.1e-206 | |
| UNIPROTKB|P04191 | 1001 | ATP2A1 "Sarcoplasmic/endoplasm | 0.986 | 0.775 | 0.534 | 1.8e-206 | |
| UNIPROTKB|Q0VCY0 | 993 | ATP2A1 "Sarcoplasmic/endoplasm | 0.988 | 0.783 | 0.534 | 3.7e-206 | |
| UNIPROTKB|O14983 | 1001 | ATP2A1 "Sarcoplasmic/endoplasm | 0.987 | 0.776 | 0.532 | 9.8e-206 | |
| UNIPROTKB|F1MGE7 | 993 | ATP2A1 "Sarcoplasmic/endoplasm | 0.988 | 0.783 | 0.536 | 2e-205 |
| TAIR|locus:2201916 ECA3 "endoplasmic reticulum-type calcium-transporting ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3263 (1153.7 bits), Expect = 0., P = 0.
Identities = 638/787 (81%), Positives = 694/787 (88%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
MEDAYARSV EVLDFFGVDPTKGL+DSQV H R+YG+NVLP+EKRT FWKLVLKQFDDL
Sbjct: 1 MEDAYARSVSEVLDFFGVDPTKGLSDSQVVHHSRLYGRNVLPEEKRTPFWKLVLKQFDDL 60
Query: 61 LVKILIAAAVISFFLALINGETGLTAFLEPSXXXXXXXXXXXXXXXTETNAEKALEELRA 120
LVKILI AA++SF LAL NGETGLTAFLEP TETNAEKALEELRA
Sbjct: 61 LVKILIVAAIVSFVLALANGETGLTAFLEPFVILLILAANAAVGVITETNAEKALEELRA 120
Query: 121 YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
YQA+IATVLRNGCFSILPA ELVPGDIVEV VGCKIPAD+RMIEM SN RVDQAILTGE
Sbjct: 121 YQANIATVLRNGCFSILPATELVPGDIVEVTVGCKIPADLRMIEMSSNTFRVDQAILTGE 180
Query: 181 SCSVEKELDSIIATNAVYQDKTNILFSGTXXXXXXXXXXXXXXXXNTAMGSIRDSMLQTE 240
SCSVEK++D + TNAVYQDK NILFSGT NTAMGSI DSMLQT+
Sbjct: 181 SCSVEKDVDCTLTTNAVYQDKKNILFSGTDVVAGRGRAVVIGVGSNTAMGSIHDSMLQTD 240
Query: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
DE TPLKKKLDEFG+FLAKVIAGICVLVW+VNIGHF DPSHGGF +GAIHYFKIAVALAV
Sbjct: 241 DEATPLKKKLDEFGSFLAKVIAGICVLVWVVNIGHFSDPSHGGFFKGAIHYFKIAVALAV 300
Query: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
AAIPEGLPAVVTTCLALGTK+MARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSV+
Sbjct: 301 AAIPEGLPAVVTTCLALGTKKMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVS 360
Query: 361 KICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNES 420
KICVV S + GP+I E+ V+GTTYAPEG VFDS+G+QL+ PAQ PCL H+A CS+LCN+S
Sbjct: 361 KICVVQSAEHGPMINEFTVSGTTYAPEGTVFDSNGMQLDLPAQSPCLHHLAMCSSLCNDS 420
Query: 421 VLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIE 480
+LQYNPDK +YEKIGE+TEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH+WE +
Sbjct: 421 ILQYNPDKDSYEKIGESTEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHYWENQ 480
Query: 481 FKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIR 540
FKKV +LEF+RDRKMMSVLCSHKQM VMFSKGAPES+++RC ILCN +G +VP+TA R
Sbjct: 481 FKKVYVLEFTRDRKMMSVLCSHKQMDVMFSKGAPESIIARCNKILCNGDGSVVPLTAAGR 540
Query: 541 AELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNA 600
AELESR S G E LRCLALA K +P +QT+SYD+E DLTFIGLVGMLDPPREEV++A
Sbjct: 541 AELESRFYSF-GDETLRCLALAFKTVPHGQQTISYDNENDLTFIGLVGMLDPPREEVRDA 599
Query: 601 MLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660
ML+CMTAGIRVIVVTGDNKSTAES+C KIGAFD+LVDF G SYTASEFE LPA+QQT+AL
Sbjct: 600 MLACMTAGIRVIVVTGDNKSTAESLCRKIGAFDNLVDFSGMSYTASEFERLPAVQQTLAL 659
Query: 661 QHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 720
+ M LF+RVEPSHKRMLVEALQ QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA
Sbjct: 660 RRMTLFSRVEPSHKRMLVEALQKQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 719
Query: 721 SDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 780
SDMVLADDNFA+IVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV
Sbjct: 720 SDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 779
Query: 781 SLISVNI 787
L+ VN+
Sbjct: 780 QLLWVNL 786
|
|
| UNIPROTKB|F1RFH9 ATP2A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 2003 (710.2 bits), Expect = 4.1e-207, P = 4.1e-207
Identities = 433/806 (53%), Positives = 542/806 (67%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A++++ E L +FGV T GLT QV RH+ YG N LP E+ + W+LV++QF+DL
Sbjct: 1 MEAAHSKTTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSXXXXXXXXXXXXXXXTETNAEKALEELR 119
LV+IL+ AA ISF LA GE +TAF+EP E NAE A+E L+
Sbjct: 61 LVRILLLAACISFVLAWFEEGEETVTAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V R ++ + A ++VPGDIVEV VG K+PAD+R++ + S LRVDQ+IL
Sbjct: 121 EYEPEMGKVYRADRKAVQRIKARDIVPGDIVEVAVGDKVPADIRILTIKSTTLRVDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTXXXXXXXXXXXXXXXXNTAMGSIRDSML 237
TGES SV K + + AV QDK N+LFSGT NT +G IRD M
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKAIGIVATTGVNTEIGKIRDQMA 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
TE + TPL++KLDEFG L+KVI+ ICV VW++NIGHF DP HGG ++RGAI+YFKIAV
Sbjct: 241 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQQGPI--IAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCS 414
MSV K+ V+ V+ G I + E+ +TG+TYAPEG V + + Q L+ +A
Sbjct: 361 MSVCKMFVIDKVE-GDICLLNEFSITGSTYAPEGEVLKND--KPVRAGQYDGLVELATIC 417
Query: 415 ALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCN 474
ALCN+S L +N KG YEK+GEATE AL L EK+ + D + LSK ERA+ CN
Sbjct: 418 ALCNDSSLDFNEAKGVYEKVGEATETALTTLVEKMNVFNTD-----VRNLSKVERANACN 472
Query: 475 HHWEIEFKKVSILEFSRDRKMMSVLCS--HKQMCV---MFSKGAPESVLSRCTNILCNDN 529
KK LEFSRDRK MSV CS + V MF KGAPE V+ RC +
Sbjct: 473 SVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSRAAVGNKMFVKGAPEGVIERCNYVRVGTT 532
Query: 530 GFIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EKDL 581
VPMT ++ + S + G++ LRCLALA + P R+ + DD E DL
Sbjct: 533 R--VPMTGPVKERILSVIKEWGTGRDTLRCLALATRDTPPKREDMVLDDSARFMEYETDL 590
Query: 582 TFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGR 641
TF+G+VGMLDPPR+EV ++ C AGIRVI++TGDNK TA +IC +IG F D R
Sbjct: 591 TFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEDVADR 650
Query: 642 SYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPAL 701
+YT EF++LP +Q A + F RVEPSHK +VE LQ+ +E+ AMTGDGVNDAPAL
Sbjct: 651 AYTGREFDDLPLPEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 710
Query: 702 KKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGE 761
KKA+IGIAMGSGTAVAK+AS+MVLADDNF+TIVAAV EGRAIYNN KQFIRY+ISSN+GE
Sbjct: 711 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGE 770
Query: 762 VVCIFVAAVLGIPDTLAPVSLISVNI 787
VVCIF+ A LG+P+ L PV L+ VN+
Sbjct: 771 VVCIFLTAALGLPEALIPVQLLWVNL 796
|
|
| RGD|621293 Atp2a1 "ATPase, Ca++ transporting, cardiac muscle, fast twitch 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 2002 (709.8 bits), Expect = 5.2e-207, P = 5.2e-207
Identities = 432/807 (53%), Positives = 543/807 (67%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A+++S E L +FGV T GLT QV RH+ YG N LP E+ + W+LV++QF+DL
Sbjct: 1 MEAAHSKSTEECLSYFGVSETTGLTPDQVKRHLEKYGPNELPAEEGKSLWELVVEQFEDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSXXXXXXXXXXXXXXXTETNAEKALEELR 119
LV+IL+ AA ISF LA GE +TAF+EP E NAE A+E L+
Sbjct: 61 LVRILLLAACISFVLAWFEEGEETVTAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V R S+ + A ++VPGDIVEV VG K+PAD+R++ + S LRVDQ+IL
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTXXXXXXXXXXXXXXXXNTAMGSIRDSML 237
TGES SV K D + AV QDK N+LFSGT +T +G IRD M
Sbjct: 181 TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAVGIVATTGVSTEIGKIRDQMA 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
TE + TPL++KLDEFG L+KVI+ ICV VW++NIGHF DP HGG + RGAI+YFKIAV
Sbjct: 241 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWFRGAIYYFKIAV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQQGPIIA--EYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCS 414
MSV K+ ++ V G I + E+ +TG+TYAPEG V + + Q L+ +A
Sbjct: 361 MSVCKMFIIDKVD-GDICSLNEFSITGSTYAPEGEVLKND--KPVRAGQYDGLVELATIC 417
Query: 415 ALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCN 474
ALCN+S L +N KG YEK+GEATE AL L EK+ + F++ + LSK ERA+ CN
Sbjct: 418 ALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNV--FNT---EVRSLSKVERANACN 472
Query: 475 HHWEIEFKKVSILEFSRDRKMMSVLCS---HKQMCV---MFSKGAPESVLSRCTNILCND 528
KK LEFSRDRK MSV CS + V MF KGAPE V+ RC +
Sbjct: 473 SVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGT 532
Query: 529 NGFIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EKD 580
VP+T ++ ++ S + G++ LRCLALA + P R+ + DD E D
Sbjct: 533 TR--VPLTGPVKEKIMSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSAKFMEYEMD 590
Query: 581 LTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640
LTF+G+VGMLDPPR+EV ++ C AGIRVI++TGDNK TA +IC +IG F +
Sbjct: 591 LTFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFSENEEVAD 650
Query: 641 RSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPA 700
R+YT EF++LP +Q A + F RVEPSHK +VE LQ+ +E+ AMTGDGVNDAPA
Sbjct: 651 RAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPA 710
Query: 701 LKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760
LKKA+IGIAMGSGTAVAK+AS+MVLADDNF+TIVAAV EGRAIYNN KQFIRY+ISSN+G
Sbjct: 711 LKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVG 770
Query: 761 EVVCIFVAAVLGIPDTLAPVSLISVNI 787
EVVCIF+ A LG+P+ L PV L+ VN+
Sbjct: 771 EVVCIFLTAALGLPEALIPVQLLWVNL 797
|
|
| MGI|MGI:105058 Atp2a1 "ATPase, Ca++ transporting, cardiac muscle, fast twitch 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 2001 (709.4 bits), Expect = 6.7e-207, P = 6.7e-207
Identities = 431/807 (53%), Positives = 543/807 (67%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A+++S E L +FGV T GLT QV RH+ YG N LP E+ + W+LV++QF+DL
Sbjct: 1 MEAAHSKSTEECLSYFGVSETTGLTPDQVKRHLEKYGPNELPAEEGKSLWELVVEQFEDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSXXXXXXXXXXXXXXXTETNAEKALEELR 119
LV+IL+ AA ISF LA GE +TAF+EP E NAE A+E L+
Sbjct: 61 LVRILLLAACISFVLAWFEEGEETVTAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V R S+ + A ++VPGDIVEV VG K+PAD+R++ + S LRVDQ+IL
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTXXXXXXXXXXXXXXXXNTAMGSIRDSML 237
TGES SV K D + AV QDK N+LFSGT +T +G IRD M
Sbjct: 181 TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAVGIVATTGVSTEIGKIRDQMA 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
TE + TPL++KLDEFG L+KVI+ ICV VW++NIGHF DP HGG + RGAI+YFKIAV
Sbjct: 241 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWFRGAIYYFKIAV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQQGPIIA--EYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCS 414
MSV K+ ++ V G + + E+ +TG+TYAPEG V + + Q L+ +A
Sbjct: 361 MSVCKMFIIDKVD-GDVCSLNEFSITGSTYAPEGEVLKND--KPVRAGQYDGLVELATIC 417
Query: 415 ALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCN 474
ALCN+S L +N KG YEK+GEATE AL L EK+ + F++ + LSK ERA+ CN
Sbjct: 418 ALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNV--FNT---EVRSLSKVERANACN 472
Query: 475 HHWEIEFKKVSILEFSRDRKMMSVLCS---HKQMCV---MFSKGAPESVLSRCTNILCND 528
KK LEFSRDRK MSV CS + V MF KGAPE V+ RC +
Sbjct: 473 SVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGT 532
Query: 529 NGFIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EKD 580
VP+T ++ ++ S + G++ LRCLALA + P R+ + DD E D
Sbjct: 533 TR--VPLTGPVKEKIMSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSAKFMEYEMD 590
Query: 581 LTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640
LTF+G+VGMLDPPR+EV ++ C AGIRVI++TGDNK TA +IC +IG F +
Sbjct: 591 LTFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFSENEEVTD 650
Query: 641 RSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPA 700
R+YT EF++LP +Q A + F RVEPSHK +VE LQ+ +E+ AMTGDGVNDAPA
Sbjct: 651 RAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPA 710
Query: 701 LKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760
LKKA+IGIAMGSGTAVAK+AS+MVLADDNF+TIVAAV EGRAIYNN KQFIRY+ISSN+G
Sbjct: 711 LKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVG 770
Query: 761 EVVCIFVAAVLGIPDTLAPVSLISVNI 787
EVVCIF+ A LG+P+ L PV L+ VN+
Sbjct: 771 EVVCIFLTAALGLPEALIPVQLLWVNL 797
|
|
| UNIPROTKB|E2RRB2 ATP2A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1999 (708.7 bits), Expect = 1.1e-206, P = 1.1e-206
Identities = 429/805 (53%), Positives = 540/805 (67%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A++++ E L +FGV T GL+ QV RH+ YG N LP E+ W+LV++QF+DL
Sbjct: 1 MEAAHSKTTEECLAYFGVSETTGLSPDQVKRHLEKYGPNELPAEEGKTLWELVIEQFEDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSXXXXXXXXXXXXXXXTETNAEKALEELR 119
LV+IL+ AA ISF LA GE +TAF+EP E NAE A+E L+
Sbjct: 61 LVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V R S+ + A ++VPGDIVEV VG K+PAD+R++ + S LRVDQ+IL
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTXXXXXXXXXXXXXXXXNTAMGSIRDSML 237
TGES SV K D + AV QDK N+LFSGT +T +G IRD M
Sbjct: 181 TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMA 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
TE + TPL++KLDEFG L+KVI+ ICV VW++NIGHF DP HGG ++RGAI+YFKIAV
Sbjct: 241 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQQGP-IIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSA 415
MSV K+ ++ V ++ E+ +TG+TYAPEG V + + Q L+ +A A
Sbjct: 361 MSVCKMFIIDKVDGNLCVLNEFAITGSTYAPEGEVLKND--KPVRSGQYDGLVELATICA 418
Query: 416 LCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475
LCN+S L +N KG YEK+GEATE AL L EK+ + D + LSK ERA+ CN
Sbjct: 419 LCNDSALDFNETKGVYEKVGEATETALTTLVEKMNVFNTD-----VRNLSKVERANACNS 473
Query: 476 HWEIEFKKVSILEFSRDRKMMSVLCS--HKQMCV---MFSKGAPESVLSRCTNILCNDNG 530
KK LEFSRDRK MSV CS + V MF KGAPE V+ RC +
Sbjct: 474 VIRQLMKKEFTLEFSRDRKSMSVYCSPAKSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTR 533
Query: 531 FIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EKDLT 582
VPMT ++ ++ S + G++ LRCLALA + P R+ + DD E DLT
Sbjct: 534 --VPMTGPVKDKILSVIKEWGTGRDTLRCLALATRDTPPKREEMILDDSARFMEYETDLT 591
Query: 583 FIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRS 642
F+G+VGMLDPPR+EV ++ C AGIRVI++TGDNK TA +IC +IG F + R+
Sbjct: 592 FVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRA 651
Query: 643 YTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALK 702
YT EF++LP +Q A + F RVEPSHK +VE LQ+ +E+ AMTGDGVNDAPALK
Sbjct: 652 YTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALK 711
Query: 703 KADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEV 762
KA+IGIAMGSGTAVAK+AS+MVLADDNF+TIVAAV EGRAIYNN KQFIRY+ISSN+GEV
Sbjct: 712 KAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEV 771
Query: 763 VCIFVAAVLGIPDTLAPVSLISVNI 787
VCIF+ A LG+P+ L PV L+ VN+
Sbjct: 772 VCIFLTAALGLPEALIPVQLLWVNL 796
|
|
| UNIPROTKB|J9P9P2 ATP2A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1999 (708.7 bits), Expect = 1.1e-206, P = 1.1e-206
Identities = 429/805 (53%), Positives = 540/805 (67%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A++++ E L +FGV T GL+ QV RH+ YG N LP E+ W+LV++QF+DL
Sbjct: 1 MEAAHSKTTEECLAYFGVSETTGLSPDQVKRHLEKYGPNELPAEEGKTLWELVIEQFEDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSXXXXXXXXXXXXXXXTETNAEKALEELR 119
LV+IL+ AA ISF LA GE +TAF+EP E NAE A+E L+
Sbjct: 61 LVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V R S+ + A ++VPGDIVEV VG K+PAD+R++ + S LRVDQ+IL
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTXXXXXXXXXXXXXXXXNTAMGSIRDSML 237
TGES SV K D + AV QDK N+LFSGT +T +G IRD M
Sbjct: 181 TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMA 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
TE + TPL++KLDEFG L+KVI+ ICV VW++NIGHF DP HGG ++RGAI+YFKIAV
Sbjct: 241 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQQGP-IIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSA 415
MSV K+ ++ V ++ E+ +TG+TYAPEG V + + Q L+ +A A
Sbjct: 361 MSVCKMFIIDKVDGNLCVLNEFAITGSTYAPEGEVLKND--KPVRSGQYDGLVELATICA 418
Query: 416 LCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475
LCN+S L +N KG YEK+GEATE AL L EK+ + D + LSK ERA+ CN
Sbjct: 419 LCNDSALDFNETKGVYEKVGEATETALTTLVEKMNVFNTD-----VRNLSKVERANACNS 473
Query: 476 HWEIEFKKVSILEFSRDRKMMSVLCS--HKQMCV---MFSKGAPESVLSRCTNILCNDNG 530
KK LEFSRDRK MSV CS + V MF KGAPE V+ RC +
Sbjct: 474 VIRQLMKKEFTLEFSRDRKSMSVYCSPAKSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTR 533
Query: 531 FIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EKDLT 582
VPMT ++ ++ S + G++ LRCLALA + P R+ + DD E DLT
Sbjct: 534 --VPMTGPVKDKILSVIKEWGTGRDTLRCLALATRDTPPKREEMILDDSARFMEYETDLT 591
Query: 583 FIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRS 642
F+G+VGMLDPPR+EV ++ C AGIRVI++TGDNK TA +IC +IG F + R+
Sbjct: 592 FVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRA 651
Query: 643 YTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALK 702
YT EF++LP +Q A + F RVEPSHK +VE LQ+ +E+ AMTGDGVNDAPALK
Sbjct: 652 YTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALK 711
Query: 703 KADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEV 762
KA+IGIAMGSGTAVAK+AS+MVLADDNF+TIVAAV EGRAIYNN KQFIRY+ISSN+GEV
Sbjct: 712 KAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEV 771
Query: 763 VCIFVAAVLGIPDTLAPVSLISVNI 787
VCIF+ A LG+P+ L PV L+ VN+
Sbjct: 772 VCIFLTAALGLPEALIPVQLLWVNL 796
|
|
| UNIPROTKB|P04191 ATP2A1 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 1" [Oryctolagus cuniculus (taxid:9986)] | Back alignment and assigned GO terms |
|---|
Score = 1997 (708.0 bits), Expect = 1.8e-206, P = 1.8e-206
Identities = 432/808 (53%), Positives = 544/808 (67%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A+++S E L +FGV T GLT QV RH+ YG N LP E+ + W+LV++QF+DL
Sbjct: 1 MEAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSXXXXXXXXXXXXXXXTETNAEKALEELR 119
LV+IL+ AA ISF LA GE +TAF+EP E NAE A+E L+
Sbjct: 61 LVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V R S+ + A ++VPGDIVEV VG K+PAD+R++ + S LRVDQ+IL
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTXXXXXXXXXXXXXXXXNTAMGSIRDSML 237
TGES SV K + + AV QDK N+LFSGT +T +G IRD M
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMA 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
TE + TPL++KLDEFG L+KVI+ ICV VW++NIGHF DP HGG ++RGAI+YFKIAV
Sbjct: 241 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQQGPIIA--EYGVTGTTYAPEGVVF-DSSGIQLEFPAQLPCLLHIARC 413
MSV K+ ++ V G + E+ +TG+TYAPEG V + I+ Q L+ +A
Sbjct: 361 MSVCKMFIIDKVD-GDFCSLNEFSITGSTYAPEGEVLKNDKPIR---SGQFDGLVELATI 416
Query: 414 SALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYC 473
ALCN+S L +N KG YEK+GEATE AL L EK+ + F++ + LSK ERA+ C
Sbjct: 417 CALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNV--FNT---EVRNLSKVERANAC 471
Query: 474 NHHWEIEFKKVSILEFSRDRKMMSVLCS---HKQMCV---MFSKGAPESVLSRCTNILCN 527
N KK LEFSRDRK MSV CS + V MF KGAPE V+ RC +
Sbjct: 472 NSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVG 531
Query: 528 DNGFIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EK 579
VPMT ++ ++ S + G++ LRCLALA + P R+ + DD E
Sbjct: 532 TTR--VPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYET 589
Query: 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFV 639
DLTF+G+VGMLDPPR+EV ++ C AGIRVI++TGDNK TA +IC +IG F +
Sbjct: 590 DLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA 649
Query: 640 GRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAP 699
R+YT EF++LP +Q A + F RVEPSHK +VE LQ+ +E+ AMTGDGVNDAP
Sbjct: 650 DRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAP 709
Query: 700 ALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNI 759
ALKKA+IGIAMGSGTAVAK+AS+MVLADDNF+TIVAAV EGRAIYNN KQFIRY+ISSN+
Sbjct: 710 ALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNV 769
Query: 760 GEVVCIFVAAVLGIPDTLAPVSLISVNI 787
GEVVCIF+ A LG+P+ L PV L+ VN+
Sbjct: 770 GEVVCIFLTAALGLPEALIPVQLLWVNL 797
|
|
| UNIPROTKB|Q0VCY0 ATP2A1 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1994 (707.0 bits), Expect = 3.7e-206, P = 3.7e-206
Identities = 430/805 (53%), Positives = 542/805 (67%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A++++ E L +FGV T GLT QV RH+ YG N LP E+ + W+LVL+QF+DL
Sbjct: 1 MEAAHSKTTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVLEQFEDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSXXXXXXXXXXXXXXXTETNAEKALEELR 119
LV+IL+ AA ISF LA GE +TAF+EP E NAE A+E L+
Sbjct: 61 LVRILLLAACISFVLAWFEEGEETVTAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V R S+ + A ++VPGDIVEV VG K+PAD+R++ + S LRVDQ+IL
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILTIKSTTLRVDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTXXXXXXXXXXXXXXXXNTAMGSIRDSML 237
TGES SV K + + AV QDK N+LFSGT T +G IRD M
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKAIGIVATTGVGTEIGKIRDQMA 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
TE + TPL++KLDEFG L+KVI+ ICV VW++NIGHF DP HGG ++RGAI+YFKIAV
Sbjct: 241 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQQGP-IIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSA 415
MSV K+ ++ + ++ E+ VTG+TYAPEG V + + Q L+ +A A
Sbjct: 361 MSVCKMFIIDRIDGDLCLLNEFSVTGSTYAPEGEVLKND--KPVRSGQYDGLVELATICA 418
Query: 416 LCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475
LCN+S L +N KG YEK+GEATE AL L EK+ + F++ + LSK ERA+ CN
Sbjct: 419 LCNDSSLDFNETKGIYEKVGEATETALTTLVEKMNV--FNT---EVRNLSKVERANACNS 473
Query: 476 HWEIEFKKVSILEFSRDRKMMSVLCS--HKQMCV---MFSKGAPESVLSRCTNILCNDNG 530
KK LEFSRDRK MSV CS + V MF KGAPE V+ RC +
Sbjct: 474 VIRQLMKKEFTLEFSRDRKSMSVYCSPAKSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTR 533
Query: 531 FIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EKDLT 582
VPMT ++ ++ S + G++ LRCLALA + P R+ + DD E DLT
Sbjct: 534 --VPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSTKFMEYETDLT 591
Query: 583 FIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRS 642
F+G+VGMLDPPR+EV ++ C AGIRVI++TGDNK TA +IC +IG F D R+
Sbjct: 592 FVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEDVADRA 651
Query: 643 YTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALK 702
YT EF++LP +Q A + F RVEP+HK +VE LQ+ +E+ AMTGDGVNDAPALK
Sbjct: 652 YTGREFDDLPLAEQREACRRACCFARVEPTHKSKIVEYLQSFDEITAMTGDGVNDAPALK 711
Query: 703 KADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEV 762
KA+IGIAMGSGTAVAK+AS+MVLADDNF+TIVAAV EGRAIYNN KQFIRY+ISSN+GEV
Sbjct: 712 KAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEV 771
Query: 763 VCIFVAAVLGIPDTLAPVSLISVNI 787
VCIF+ A LG+P+ L PV L+ VN+
Sbjct: 772 VCIFLTAALGLPEALIPVQLLWVNL 796
|
|
| UNIPROTKB|O14983 ATP2A1 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1990 (705.6 bits), Expect = 9.8e-206, P = 9.8e-206
Identities = 430/807 (53%), Positives = 540/807 (66%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A+A++ E L +FGV T GLT QV R++ YG N LP E+ W+LV++QF+DL
Sbjct: 1 MEAAHAKTTEECLAYFGVSETTGLTPDQVKRNLEKYGLNELPAEEGKTLWELVIEQFEDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSXXXXXXXXXXXXXXXTETNAEKALEELR 119
LV+IL+ AA ISF LA GE +TAF+EP E NAE A+E L+
Sbjct: 61 LVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V R S+ + A ++VPGDIVEV VG K+PAD+R++ + S LRVDQ+IL
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILAIKSTTLRVDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTXXXXXXXXXXXXXXXXNTAMGSIRDSML 237
TGES SV K + + AV QDK N+LFSGT T +G IRD M
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVGTEIGKIRDQMA 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
TE + TPL++KLDEFG L+KVI+ ICV VW++NIGHF DP HGG + RGAI+YFKIAV
Sbjct: 241 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWFRGAIYYFKIAV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQQGPI--IAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCS 414
MSV K+ ++ V G I + E+ +TG+TYAPEG V + + P Q L+ +A
Sbjct: 361 MSVCKMFIIDKVD-GDICLLNEFSITGSTYAPEGEVLKND--KPVRPGQYDGLVELATIC 417
Query: 415 ALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCN 474
ALCN+S L +N KG YEK+GEATE AL L EK+ + D + LSK ERA+ CN
Sbjct: 418 ALCNDSSLDFNEAKGVYEKVGEATETALTTLVEKMNVFNTD-----VRSLSKVERANACN 472
Query: 475 HHWEIEFKKVSILEFSRDRKMMSVLCS---HKQMCV---MFSKGAPESVLSRCTNILCND 528
KK LEFSRDRK MSV CS + V MF KGAPE V+ RC +
Sbjct: 473 SVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGT 532
Query: 529 NGFIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EKD 580
VP+T ++ ++ + + G++ LRCLALA + P R+ + DD E D
Sbjct: 533 TR--VPLTGPVKEKIMAVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSARFLEYETD 590
Query: 581 LTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640
LTF+G+VGMLDPPR+EV ++ C AGIRVI++TGDNK TA +IC +IG F +
Sbjct: 591 LTFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVAD 650
Query: 641 RSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPA 700
R+YT EF++LP +Q A + F RVEPSHK +VE LQ+ +E+ AMTGDGVNDAPA
Sbjct: 651 RAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPA 710
Query: 701 LKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760
LKKA+IGIAMGSGTAVAK+AS+MVLADDNF+TIVAAV EGRAIYNN KQFIRY+ISSN+G
Sbjct: 711 LKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVG 770
Query: 761 EVVCIFVAAVLGIPDTLAPVSLISVNI 787
EVVCIF+ A LG+P+ L PV L+ VN+
Sbjct: 771 EVVCIFLTAALGLPEALIPVQLLWVNL 797
|
|
| UNIPROTKB|F1MGE7 ATP2A1 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1987 (704.5 bits), Expect = 2.0e-205, P = 2.0e-205
Identities = 432/805 (53%), Positives = 540/805 (67%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A++++ E L +FGV T GLT QV RH+ YG N LP E+ + W+LVL+QF+DL
Sbjct: 1 MEAAHSKTTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVLEQFEDL 60
Query: 61 LVKILIAAAVISFFLALIN-GETGLTAFLEPSXXXXXXXXXXXXXXXTETNAEKALEELR 119
LV+IL+ AA ISF LA GE +TAF+EP E NAE A+E L+
Sbjct: 61 LVRILLLAACISFVLAWFEEGEETVTAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V R S+ + A ++VPGDIVEV VG K+PAD+R++ + S LRVDQ+IL
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILTIKSTTLRVDQSIL 180
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTXXXXXXXXXXXXXXXXNTAMGSIRDSML 237
TGES SV K + + AV QDK N+LFSGT T +G IRD M
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKAIGIVATTGVGTEIGKIRDQMA 240
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
TE + TPL++KLDEFG L+KVI+ ICV VW++NIGHF DP HGG ++RGAI+YFKIAV
Sbjct: 241 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAV 300
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 357 MSVAKICVVHSVQ-QGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSA 415
MSV K V + Q + E+ VTG+TYAPEG V + + Q L+ +A A
Sbjct: 361 MSVCKESVYDFIGGQYCXLNEFSVTGSTYAPEGEVLKND--KPVRSGQYDGLVELATICA 418
Query: 416 LCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475
LCN+S L +N KG YEK+GEATE AL L EK+ + F++ + LSK ERA+ CN
Sbjct: 419 LCNDSSLDFNETKGIYEKVGEATETALTTLVEKMNV--FNT---EVRNLSKVERANACNS 473
Query: 476 HWEIEFKKVSILEFSRDRKMMSVLCS--HKQMCV---MFSKGAPESVLSRCTNILCNDNG 530
KK LEFSRDRK MSV CS + V MF KGAPE V+ RC +
Sbjct: 474 VIRQLMKKEFTLEFSRDRKSMSVYCSPAKSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTR 533
Query: 531 FIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EKDLT 582
VPMT ++ ++ S + G++ LRCLALA + P R+ + DD E DLT
Sbjct: 534 --VPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSTKFMEYETDLT 591
Query: 583 FIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRS 642
F+G+VGMLDPPR+EV ++ C AGIRVI++TGDNK TA +IC +IG F D R+
Sbjct: 592 FVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEDVADRA 651
Query: 643 YTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALK 702
YT EF++LP +Q A + F RVEP+HK +VE LQ+ +E+ AMTGDGVNDAPALK
Sbjct: 652 YTGREFDDLPLAEQREACRRACCFARVEPTHKSKIVEYLQSFDEITAMTGDGVNDAPALK 711
Query: 703 KADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEV 762
KA+IGIAMGSGTAVAK+AS+MVLADDNF+TIVAAV EGRAIYNN KQFIRY+ISSN+GEV
Sbjct: 712 KAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEV 771
Query: 763 VCIFVAAVLGIPDTLAPVSLISVNI 787
VCIF+ A LG+P+ L PV L+ VN+
Sbjct: 772 VCIFLTAALGLPEALIPVQLLWVNL 796
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P04191 | AT2A1_RABIT | 3, ., 6, ., 3, ., 8 | 0.5526 | 0.9872 | 0.7762 | yes | no |
| Q9YGL9 | AT2A3_CHICK | 3, ., 6, ., 3, ., 8 | 0.5427 | 0.9872 | 0.7456 | yes | no |
| Q9SY55 | ECA3_ARATH | 3, ., 6, ., 3, ., 8 | 0.8449 | 0.9987 | 0.7875 | yes | no |
| Q292Q0 | ATC1_DROPS | 3, ., 6, ., 3, ., 8 | 0.5471 | 0.9885 | 0.7764 | yes | no |
| Q0VCY0 | AT2A1_BOVIN | 3, ., 6, ., 3, ., 8 | 0.5527 | 0.9885 | 0.7834 | yes | no |
| Q64578 | AT2A1_RAT | 3, ., 6, ., 3, ., 8 | 0.5539 | 0.9872 | 0.7816 | yes | no |
| Q8Y8Q5 | LMCA1_LISMO | 3, ., 6, ., 3, ., 8 | 0.3707 | 0.9047 | 0.8090 | yes | no |
| Q7PPA5 | ATC1_ANOGA | 3, ., 6, ., 3, ., 8 | 0.5397 | 0.9872 | 0.7632 | yes | no |
| Q8R429 | AT2A1_MOUSE | 3, ., 6, ., 3, ., 8 | 0.5526 | 0.9872 | 0.7816 | yes | no |
| P22700 | ATC1_DROME | 3, ., 6, ., 3, ., 8 | 0.5496 | 0.9885 | 0.7627 | yes | no |
| O14983 | AT2A1_HUMAN | 3, ., 6, ., 3, ., 8 | 0.5526 | 0.9872 | 0.7762 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 787 | |||
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-162 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-132 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-129 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-115 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-115 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 3e-61 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 1e-58 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 6e-51 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 3e-47 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 4e-46 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 6e-45 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 7e-40 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 8e-38 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 3e-37 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 5e-36 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 5e-28 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 3e-26 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 5e-25 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 4e-24 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-23 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 4e-23 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 3e-22 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 1e-20 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 1e-20 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-20 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 3e-19 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 4e-19 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 6e-18 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 8e-17 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 5e-16 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 2e-15 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 5e-15 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 4e-13 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-12 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 7e-12 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 2e-10 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 5e-10 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-07 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 1e-06 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 9e-06 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 1e-05 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 2e-05 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 2e-05 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 5e-05 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 1e-04 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 0.004 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 995 bits (2573), Expect = 0.0
Identities = 448/744 (60%), Positives = 540/744 (72%), Gaps = 21/744 (2%)
Query: 53 VLKQFDDLLVKILIAAAVISFFLALI-NGETGLTAFLEPSVILLILAANAAVGVITETNA 111
VL+QF+DLLV+IL+ AA +SF LA GE +TAF+EP VILLIL ANA VGV E NA
Sbjct: 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNA 60
Query: 112 EKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLR 171
EKA+E L+ Y+++ A VLR+G +S++ A +LVPGDIVE+ VG K+PAD+R++ + + LR
Sbjct: 61 EKAIEALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT--LR 118
Query: 172 VDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGS 231
VDQ+ILTGES SV K +S+ AV QDK N+LFSGT+VVAG+AR VVV G +T +G
Sbjct: 119 VDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGK 178
Query: 232 IRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGF-LRGAIH 290
IRD M E E TPL+KKLDEFG L+KVI IC+LVW++NIGHF DP+ GG ++GAI+
Sbjct: 179 IRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIY 238
Query: 291 YFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTG 350
YFKIAVALAVAAIPEGLPAV+TTCLALGT++MA+ NAIVR LPSVETLGCTTVICSDKTG
Sbjct: 239 YFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTG 298
Query: 351 TLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHI 410
TLTTN MSV K+ + + E+ VTGTTYAPEG V G Q L +
Sbjct: 299 TLTTNQMSVCKVVALDPSSSS--LNEFCVTGTTYAPEGGVIKDDGPVAG--GQDAGLEEL 354
Query: 411 ARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERA 470
A +ALCN+S L +N KG YEK+GEATE AL+VL EK+GLP + + SK A
Sbjct: 355 ATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPA-----TKNGVSSKRRPA 409
Query: 471 SYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNG 530
CN W +FKK++ LEFSRDRK MSVLC +F KGAPE VL RCT+IL N +G
Sbjct: 410 LGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHIL-NGDG 468
Query: 531 FIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDD-------EKDLTF 583
VP+T ++ + S + + +ALRCLALA K +P R+ D E DLTF
Sbjct: 469 RAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTF 528
Query: 584 IGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY 643
IG+VGMLDPPR EV +A+ C TAGIRVI++TGDNK TAE+IC +IG F D +S+
Sbjct: 529 IGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSF 588
Query: 644 TASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKK 703
T EF+E+ +Q A + LF+RVEPSHK LVE LQ Q E+VAMTGDGVNDAPALKK
Sbjct: 589 TGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKK 648
Query: 704 ADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVV 763
ADIGIAMGSGT VAK ASDMVLADDNFATIVAAV EGRAIYNN KQFIRYMISSNIGEVV
Sbjct: 649 ADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVV 708
Query: 764 CIFVAAVLGIPDTLAPVSLISVNI 787
CIF+ A LGIP+ L PV L+ VN+
Sbjct: 709 CIFLTAALGIPEGLIPVQLLWVNL 732
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 644 bits (1662), Expect = 0.0
Identities = 302/771 (39%), Positives = 425/771 (55%), Gaps = 75/771 (9%)
Query: 8 SVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIA 67
E+L PT GL++ +V R ++ YG N LP+EK+ + K L+QF D + +L+
Sbjct: 29 ERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLV 88
Query: 68 AAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIAT 127
AA++S F+ A ++ VILL++ NA +G + E AEKALE L+ + A
Sbjct: 89 AALLSAFVGDWVD-----AGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAK 143
Query: 128 VLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKE 187
VLR+G F +PA+ELVPGDIV + G +PAD+R++E S+ L VD++ LTGES VEK+
Sbjct: 144 VLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLE--SSDLEVDESALTGESLPVEKQ 201
Query: 188 LDSI-IATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPL 246
+ + + D+ N+LFSGT VV+GRA+ +VV G T G I + ++ TPL
Sbjct: 202 ALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPL 261
Query: 247 KKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEG 306
++KL++ G FL + + LV++V + + FL A+ALAVAA+PEG
Sbjct: 262 QRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLT--------ALALAVAAVPEG 313
Query: 307 LPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVH 366
LPAVVT LALG +RMA+ NAIVRSL ++ETLG VICSDKTGTLT N M+V KI
Sbjct: 314 LPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKI---- 369
Query: 367 SVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNP 426
Y G I + P LL +ALCN P
Sbjct: 370 -----------------YINGG----GKDIDDKDLKDSPALLRFLLAAALCNSVT----P 404
Query: 427 DKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSI 486
+K + + G+ TE AL AEK+G E+E+ ++
Sbjct: 405 EKNGWYQAGDPTEGALVEFAEKLGFSLD-------------------LSGLEVEYPILAE 445
Query: 487 LEFSRDRKMMSVLCSHKQ-MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELES 545
+ F +RK MSV+ + ++F KGAPE +L RC +I + P+T LE
Sbjct: 446 IPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGE-----LEPLTEEGLRTLEE 500
Query: 546 RLNSLAGKEALRCLALALKQMPINRQTLSYD-DEKDLTFIGLVGMLDPPREEVKNAMLSC 604
+ LA E LR LA+A K++ + D E DL F+GL G+ DPPRE+VK A+
Sbjct: 501 AVKELA-SEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEEL 559
Query: 605 MTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMA 664
AGI+V ++TGD+ TA +I + G +E + L + ++ ++
Sbjct: 560 REAGIKVWMITGDHVETAIAIAKECGIEAE--AESALVIDGAELDALSDEELAELVEELS 617
Query: 665 LFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDM 723
+F RV P K +VEALQ VVAMTGDGVNDAPALK AD+GIAMG GT AK A+D+
Sbjct: 618 VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADI 677
Query: 724 VLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIP 774
VL DDNFATIV AV EGR +Y N K+FI Y++S N+GEV+ + + ++ +
Sbjct: 678 VLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF 728
|
Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 493 bits (1270), Expect = e-162
Identities = 282/791 (35%), Positives = 417/791 (52%), Gaps = 89/791 (11%)
Query: 8 SVVEVLDFFGVDPTKGLTDSQVARHVR-IYGKNVLPQEKRTAFWKLVLKQF-DDLLVKIL 65
SV E D GL SQ A H R +G N E+ + WK L QF + L+ +L
Sbjct: 8 SVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLL 67
Query: 66 IAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADI 125
IA+AVIS F+ I+ +T + +LI+ VG + E +EK+LE L
Sbjct: 68 IASAVISVFMGNIDDAVSIT------LAILIVVT---VGFVQEYRSEKSLEALNKLVPPE 118
Query: 126 ATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVE 185
++R G + A+ LVPGD+V ++VG ++PAD+R++E + L +D++ LTGE+ V
Sbjct: 119 CHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAV--DLSIDESNLTGETTPVS 176
Query: 186 KELDSIIATNAV-YQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244
K I A +++NI F GT+V G + +VVG G+NT G++ M E T
Sbjct: 177 KVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKT 236
Query: 245 PLKKKLDEFG---TFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGA--IHYFKIAVALA 299
PL+K +D G + ++ + G+ LV G+ +G + F I+V+LA
Sbjct: 237 PLQKSMDLLGKQLSLVSFGVIGVICLV--------------GWFQGKDWLEMFTISVSLA 282
Query: 300 VAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSV 359
VAAIPEGLP +VT LALG RM++ AIVR LPSVETLG VICSDKTGTLT N M+V
Sbjct: 283 VAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTV 342
Query: 360 AKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNE 419
KI + + + G V + F + I LCN
Sbjct: 343 TKIWTSDGLHT-------MLNAVSLNQFGEVIVDGDVLHGFYT--VAVSRILEAGNLCNN 393
Query: 420 SVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEI 479
+ + D +G T+VAL L K GL R +Y
Sbjct: 394 AKFRNEAD----TLLGNPTDVALIELLMKFGLDDL--------------RETY------- 428
Query: 480 EFKKVSILEFSRDRKMMSVLCSHKQ--MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTA 537
+V+ + FS +RK M+V C H+Q + F KGA E VL CT +G + +T
Sbjct: 429 --IRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTY-YQKKDGKTLTLTQ 485
Query: 538 NIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEV 597
R ++ +A LR +A A ++ LTF+GLVG+ DPPR V
Sbjct: 486 QQRDVIQEEAAEMAS-AGLRVIAFASGP-----------EKGQLTFLGLVGINDPPRPGV 533
Query: 598 KNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQT 657
K A+ + +T G+R+I++TGD++ TA SI ++G + +S + + + + Q +
Sbjct: 534 KEAVTTLITGGVRIIMITGDSQETAVSIARRLG----MPSKTSQSVSGEKLDAMDDQQLS 589
Query: 658 VALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAV 716
+ +A+F R P HK +V+ALQ + +VVAMTGDGVNDAPALK ADIG+AMG +GT V
Sbjct: 590 QIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV 649
Query: 717 AKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDT 776
AK A+DM+L DD+FATI++A+ EG+ I+NN K FI + +S+++ + I +A ++G P+
Sbjct: 650 AKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNP 709
Query: 777 LAPVSLISVNI 787
L + ++ +NI
Sbjct: 710 LNAMQILWINI 720
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 404 bits (1040), Expect = e-132
Identities = 204/696 (29%), Positives = 295/696 (42%), Gaps = 158/696 (22%)
Query: 92 VILLILAANAAVGVITETNAEKALEELRAYQAD--IATVLRNGCFSILPAAELVPGDIVE 149
IL ++ + V + AE L L + ATVLRNG I PA +LVPGD+V
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGWKEI-PAKDLVPGDVVL 59
Query: 150 VNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGT 209
V G +PAD + LS VD++ LTGES V K +++F+GT
Sbjct: 60 VKSGETVPADGVL---LSGSCFVDESNLTGESNPVLKTALK---ETQSGTITGDLVFAGT 113
Query: 210 VVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTF-LAKVIAGICVLV 268
V G VV G T +G I + + TPL+ K D F + + + V
Sbjct: 114 YVFGGTLIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAV 173
Query: 269 WIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAI 328
++ DP+ A+ + V +P LPA VT LA+G R+A+ +
Sbjct: 174 FLYLFIRGWDPNSIFKA------LLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGIL 227
Query: 329 VRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEG 388
VR+L ++E LG +CSDKTGTLT N M++ + + ++ +
Sbjct: 228 VRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYID-GGKEDNSSS------------- 273
Query: 389 VVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEK 448
N G+ E AL AE
Sbjct: 274 ------------------------------------LVACDNNYLSGDPMEKALLKSAEL 297
Query: 449 VGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSH-KQMCV 507
VG + E+K + + FS K MSV+ +
Sbjct: 298 VG-------------KADKGN---------KEYKILDVFPFSSVLKRMSVIVETPDGSDL 335
Query: 508 MFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMP 567
+F KGAPE +L RC N E + LA ++ LR LA A K++
Sbjct: 336 LFVKGAPEFILERCNN-------------------YEEKYLELA-RQGLRVLAFASKELE 375
Query: 568 INRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH 627
DL F+GL+ DP R + K + AGI+V+++TGDN TA++I
Sbjct: 376 -----------DDLEFLGLITFEDPLRPDAKETIEELKAAGIKVVMITGDNVLTAKAIAK 424
Query: 628 KIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEV 687
++G + +F RV P K +VEALQ + +
Sbjct: 425 ELG--------------------------------IDVFARVSPEQKLQIVEALQKKGHI 452
Query: 688 VAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNT 747
VAMTGDGVNDAPALKKAD+GIAMG AK+A+D+VL DD+ + IV AV EGR I++N
Sbjct: 453 VAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDDLSAIVKAVKEGRKIFSNI 507
Query: 748 KQFIRYMISSNIGEVVCIFVAAVLG-IPDTLAPVSL 782
K I + I+ N+ + + V+ + LA ++L
Sbjct: 508 KSNIFWAIAYNLILIPLALLLIVIILLLPMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 408 bits (1050), Expect = e-129
Identities = 249/791 (31%), Positives = 367/791 (46%), Gaps = 91/791 (11%)
Query: 18 VDPTKGL--TDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFL 75
D +G+ + S + R ++YGKN LP++ +F ++V D + +L AAV+S L
Sbjct: 54 TDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVL 113
Query: 76 ALI-----NGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEEL-RAYQADIATVL 129
L +T T ++E IL+ + V + + E +L R A V+
Sbjct: 114 GLPEPGEGKADTE-TGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVI 172
Query: 130 RNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELD 189
R G + ++V GDIV ++ G +PAD I L +D++ +TGES ++K
Sbjct: 173 RGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFIS--GLSLEIDESSITGESDPIKK--- 227
Query: 190 SIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKK 249
+ L SGTVV G R +V VG N+ G + + Q ++ TPL++K
Sbjct: 228 --------GPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEK 279
Query: 250 LDEFGTFLAKVIAGICVLVWIVNIGHF----------RDPSHGGFLRGAIHYFKIAVALA 299
L E + K G VL+++V + + +F IAV +
Sbjct: 280 LSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTF---LDHFIIAVTIV 336
Query: 300 VAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSV 359
V A+PEGLP VT LA K+M + N +VR L + ET+G T ICSDKTGTLT N+MSV
Sbjct: 337 VVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSV 396
Query: 360 AKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNE 419
V G F+ + P + +L +
Sbjct: 397 -------------------VQGY---IGEQRFNVRDVLRNVPKHVRNIL----VEGISLN 430
Query: 420 SVLQYNPDKGNYEK-IGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWE 478
S + D+G IG TE AL + +
Sbjct: 431 SSSEEVVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRA-------------------- 470
Query: 479 IEFKKVSILEFSRDRKMMSVLCSHKQMCV-MFSKGAPESVLSRCTNILCNDNGFIVPMTA 537
E K V I F+ +RK MSV+ H F KGA E VL C L + NG P++
Sbjct: 471 -EEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRL-DSNGEATPISD 528
Query: 538 NIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEV 597
+ + + LA +ALR + LA + K LT IG+VG+ DP R V
Sbjct: 529 DDKDRCADVIEPLA-SDALRTICLAYRDFAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGV 587
Query: 598 KNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQT 657
+ A+ C AGI V +VTGDN TA++I G ++ F G + EF L +
Sbjct: 588 REAVQECQRAGITVRMVTGDNIDTAKAIARNCG----ILTFGGLAMEGKEFRSLVYEEMD 643
Query: 658 VALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAV 716
L + + R P K++LV L++ EVVA+TGDG NDAPALK AD+G +MG SGT V
Sbjct: 644 PILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV 703
Query: 717 AKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDT 776
AK ASD++L DDNFA+IV AV GR +Y+N ++F+++ ++ N+ V+ FV + +
Sbjct: 704 AKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSP 763
Query: 777 LAPVSLISVNI 787
L V L+ VN+
Sbjct: 764 LTAVQLLWVNL 774
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 371 bits (955), Expect = e-115
Identities = 269/838 (32%), Positives = 406/838 (48%), Gaps = 120/838 (14%)
Query: 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLV 62
D + S+ E+ +G D +KGL+ ++ A + G N L T W +Q
Sbjct: 16 DDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFS 75
Query: 63 KILIAAAVISFFLALINGETGLTAFLEPSVILLILA-ANAAVGVIT-------ETNAEKA 114
+L A++ F I T EP L L +AV +IT E + K
Sbjct: 76 MLLWIGAILCFLAYGIQASTEE----EPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKI 131
Query: 115 LEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQ 174
+E + A V+R+G + A ++V GD+VEV G +IPAD+R+I + +VD
Sbjct: 132 MESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIIS--AQGCKVDN 189
Query: 175 AILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRD 234
+ LTGES E + S T+ + NI F T V G AR +VV G T MG I
Sbjct: 190 SSLTGES---EPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIAS 246
Query: 235 SMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVN--IGHFRDPSHGGFLRGAIHYF 292
E+ TP+ +++ F + V + V +I++ +G+ +L I F
Sbjct: 247 LASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY-------TWLEAVI--F 297
Query: 293 KIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTL 352
I + VA +PEGL A VT CL L KRMAR N +V++L +VETLG T+ ICSDKTGTL
Sbjct: 298 LIGII--VANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTL 355
Query: 353 TTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIAR 412
T N M+VA H I TT GV FD S L ++R
Sbjct: 356 TQNRMTVA-----HMWFDNQIH----EADTTEDQSGVSFDKSS---------ATWLALSR 397
Query: 413 CSALCNESVLQYNPDKGNYEK---IGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHER 469
+ LCN +V + + K G+A+E AL E + S + M ++ +
Sbjct: 398 IAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIEL-------CLGSVMEMRERNPK 450
Query: 470 ASYCNHHWEIEFK-----KVSI--LEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCT 522
EI F ++SI E RD + + V+ KGAPE +L RC+
Sbjct: 451 VV------EIPFNSTNKYQLSIHENEDPRDPRHLLVM-----------KGAPERILERCS 493
Query: 523 NILCNDNGFIVPMTANIRAELESRLNSLAG--KEALR-C-LALALKQMPINRQTLSYDDE 578
+IL + G P+ ++ ++ L G + L C L L +Q P + +D +
Sbjct: 494 SILIH--GKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFP---EGFQFDTD 548
Query: 579 ------KDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF 632
+L F+GL+ M+DPPR V +A+ C +AGI+VI+VTGD+ TA++I +G
Sbjct: 549 DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII 608
Query: 633 ----DHLVDFVGR----------------SYTASEFEELPAMQQTVALQHMA--LFTRVE 670
+ + D R S+ +++ + Q L++ +F R
Sbjct: 609 SEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTS 668
Query: 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDN 729
P K ++VE Q Q +VA+TGDGVND+PALKKADIG+AMG +G+ V+K A+DM+L DDN
Sbjct: 669 PQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDN 728
Query: 730 FATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787
FA+IV V EGR I++N K+ I Y ++SNI E+ + + IP L ++++ +++
Sbjct: 729 FASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDL 786
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 372 bits (957), Expect = e-115
Identities = 241/842 (28%), Positives = 409/842 (48%), Gaps = 110/842 (13%)
Query: 14 DFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISF 73
+F G +GLT + ++ G+N L + ++L Q + + +LI AA ISF
Sbjct: 17 EFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISF 76
Query: 74 FLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGC 133
+ ++E VI I+A N +G I E AEK ++ L+ + +A V+RNG
Sbjct: 77 ---------AMHDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGK 127
Query: 134 FSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIA 193
+ + +LVPGDI + G IPAD+R+IE + D+A+LTGES V K+
Sbjct: 128 SDAIDSHDLVPGDICLLKTGDTIPADLRLIE--TKNFDTDEALLTGESLPVIKD------ 179
Query: 194 TNAVYQ--------DKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDS------MLQT 239
+A + D+ N+ FS + V GRA+ + + N+ +G+I + Q
Sbjct: 180 AHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQR 239
Query: 240 EDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALA 299
++ P K++ ++ KV + +N+G P H + A+ F IA+ A
Sbjct: 240 PEKDDPNKRRK--LNKWILKVTKKVTGAFLGLNVG---TPLHRKLSKLAVILFCIAIIFA 294
Query: 300 V-----------------------AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVE 336
+ + IPE L AV++ +A+G M++ N IVR L ++E
Sbjct: 295 IIVMAAHKFDVDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALE 354
Query: 337 TLGCTTVICSDKTGTLTTNMMSVAKICV------------------VHSVQQGPIIAEYG 378
LG ICSDKTGT+T M +I + +V P + Y
Sbjct: 355 ALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYE 414
Query: 379 VTGTTYAPEGVV--FDSSGIQLEFPAQLPCLLHIA--RCSALCNESVLQYNPDKGNYEKI 434
+ A + ++ F +++ P + L I +AL N + + + ++
Sbjct: 415 YSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAH 474
Query: 435 GEATEVALRVLAEKVGLPGFDSM-PSALNMLSKHERASYCNHHWE---IEFKKVSILEFS 490
G+ TE+A+ V A+K LP L ++++++S H+ + +F+ ++ F
Sbjct: 475 GDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFD 534
Query: 491 RDRKMMSVLC--SHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLN 548
+ K M+ + +H + +++KGA E ++ C++ D I P+ R + + +
Sbjct: 535 SEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANME 594
Query: 549 SLAGKEALRCLALALKQM--------PINRQTLSYD-DEKDLTFIGLVGMLDPPREEVKN 599
SLA E LR LA A K + +TL+ E DL F+GL+G+ DPPR E
Sbjct: 595 SLAA-EGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAG 653
Query: 600 AMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF--------DHLVDFVGRSYTASEFEEL 651
A+ C AGI V ++TGD TA++I ++G D ++D + T S+F+ L
Sbjct: 654 AVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSM--VMTGSQFDAL 711
Query: 652 PAMQQTVALQHMAL-FTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM 710
+ ++ L+ + L R P K ++EAL + AMTGDGVND+P+LK A++GIAM
Sbjct: 712 -SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM 770
Query: 711 G-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAA 769
G +G+ VAK ASD+VL+DDNFA+I+ A+ EGR +++N +F+ ++++ N+ E + + +
Sbjct: 771 GINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGL 830
Query: 770 VL 771
Sbjct: 831 AF 832
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 220 bits (562), Expect = 3e-61
Identities = 117/343 (34%), Positives = 174/343 (50%), Gaps = 33/343 (9%)
Query: 23 GLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGET 82
GLT ++ + + YG N LP++K + K L F + L ++ AAA+I+ L N
Sbjct: 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKF-LGFFWNPLSWVMEAAAIIAIALE--NWVD 57
Query: 83 GLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAEL 142
+ +IL +L NA +G I E A A+E L+ A A VLR+G + +PA+EL
Sbjct: 58 FV-------IILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASEL 110
Query: 143 VPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKT 202
VPGD+V + +G +PAD R+ E + ++VDQA LTGES V K+ I
Sbjct: 111 VPGDVVRLKIGDIVPADCRLFE--GDYIQVDQAALTGESLPVTKKTGDIA---------- 158
Query: 203 NILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIA 262
+SG+ V G A AVV G NT G + TE L+K L + G FL +I
Sbjct: 159 ---YSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIG 215
Query: 263 GICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRM 322
+ ++ +V F G + A+ L V IP +PAV++ +A+G +
Sbjct: 216 VLVLIELVVLFFGR----GESFREG----LQFALVLLVGGIPIAMPAVLSVTMAVGAAEL 267
Query: 323 ARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVV 365
A+ AIV L ++E L ++CSDKTGTLT N +S+ +I
Sbjct: 268 AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPF 310
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 198 bits (506), Expect = 1e-58
Identities = 82/247 (33%), Positives = 131/247 (53%), Gaps = 26/247 (10%)
Query: 92 VILLILAANAAVGVITETNAEKALEELRAYQADIA-TVLRNGCFSILPAAELVPGDIVEV 150
+ILL++ NA + E A KAL+ L+ A TV+R+G +PA ELV GDIV +
Sbjct: 1 IILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLL 60
Query: 151 NVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTV 210
G ++PAD R+IE L VD++ LTGES VEK + + +F+GTV
Sbjct: 61 KPGDRVPADGRIIE---GSLEVDESALTGESLPVEK-------------SRGDTVFAGTV 104
Query: 211 VVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWI 270
V++G + +V G +T +G I + + + TPL++ LD+ L ++ + +LV++
Sbjct: 105 VLSGELKVIVTATGEDTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFL 164
Query: 271 VNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVR 330
+ D + A+A+ VAA PE LP V LA+G R+A+ +V+
Sbjct: 165 IWFFRGGDF---------LEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVK 215
Query: 331 SLPSVET 337
+L ++ET
Sbjct: 216 NLSALET 222
|
Length = 222 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 192 bits (489), Expect = 6e-51
Identities = 90/295 (30%), Positives = 155/295 (52%), Gaps = 20/295 (6%)
Query: 481 FKKVSILEFSRDRKMMSVLCS-----HKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPM 535
++K+ + F +R+ MSV+ + H+ +C KGA E +L+ C+ + NG IVP+
Sbjct: 441 WQKIDEIPFDFERRRMSVVVAENTEHHQLIC----KGALEEILNVCSQV--RHNGEIVPL 494
Query: 536 TANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPRE 595
+ ++ ++L ++ LR +A+A K +P DE DL G + LDPP+E
Sbjct: 495 DDIMLRRIKRVTDTL-NRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKE 553
Query: 596 EVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIG-AFDHLVDFVGRSYTASEFEELPAM 654
A+ + +G+ V ++TGD++ A +CH++G ++ S+ E L
Sbjct: 554 TTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGEVL-------IGSDIETLSDD 606
Query: 655 QQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGT 714
+ + LF R+ P HK +V L+ + VV GDG+NDAPAL+ ADIGI++
Sbjct: 607 ELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAV 666
Query: 715 AVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAA 769
+A+ A+D++L + + + V EGR + N ++I+ SSN G V + VA+
Sbjct: 667 DIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVAS 721
|
Length = 902 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 180 bits (458), Expect = 3e-47
Identities = 108/349 (30%), Positives = 183/349 (52%), Gaps = 30/349 (8%)
Query: 12 VLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVI 71
+L GV T GLT+ +V + +G N +EK+ +L+++ F++ + IL +
Sbjct: 23 LLRKLGVHET-GLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGV 81
Query: 72 SFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLR- 130
S+ L A + +I L++ A+ +G I E+ AE+A L+ + ATVLR
Sbjct: 82 SYL------TDDLEATV---IIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRV 132
Query: 131 -----NGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVE 185
NG +P LVPGD++E+ G IPAD R+I + L ++Q+ LTGES VE
Sbjct: 133 INENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVIS--ARDLFINQSALTGESLPVE 190
Query: 186 KELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245
K ++ A + ++ N+ F GT V++G A+AVV+ G++T GS+ + + + T
Sbjct: 191 KFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQ-TA 249
Query: 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGA-IHYFKIAVALAVAAIP 304
K + L + + + +V ++N G ++G + F A+A+AV P
Sbjct: 250 FDKGVKSVSKLLIRFMLVMVPVVLMIN----------GLMKGDWLEAFLFALAVAVGLTP 299
Query: 305 EGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLT 353
E LP +V++ LA G M++ IV+ L +++ G ++C+DKTGTLT
Sbjct: 300 EMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLT 348
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 177 bits (450), Expect = 4e-46
Identities = 90/290 (31%), Positives = 157/290 (54%), Gaps = 10/290 (3%)
Query: 481 FKKVSILEFSRDRKMMSVLCSHKQ-MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANI 539
+KKV + F DR+ +SV+ ++ + + KGA E +L+ CT+ G +V ++ +
Sbjct: 406 WKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHK--RFGGAVVTLSESE 463
Query: 540 RAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKN 599
++EL+ + ++ +R +A+A K + + + DE+ L G +G LDPP+E K
Sbjct: 464 KSELQDMTAEM-NRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKE 522
Query: 600 AMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVA 659
A+ + GI V V+TGDN+ IC ++G + DF+ ++ EEL +
Sbjct: 523 AIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN--DFL----LGADIEELSDEELARE 576
Query: 660 LQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKS 719
L+ +F R+ P K ++ L+ V GDG+NDAPAL+KAD+GI++ + +AK
Sbjct: 577 LRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKE 636
Query: 720 ASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAA 769
ASD++L + + + V EGR + N ++++ SSN G V + VA+
Sbjct: 637 ASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVAS 686
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 174 bits (443), Expect = 6e-45
Identities = 195/858 (22%), Positives = 323/858 (37%), Gaps = 185/858 (21%)
Query: 23 GLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGET 82
GLT +A+ YGKN + ++ + F +LL + ++ F
Sbjct: 139 GLTTGDIAQRKAKYGKNEI---------EIPVPSFLELLKEEVLHP--FYVFQVFSVILW 187
Query: 83 GLTAFLEPSV-ILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAE 141
L + S+ I+ + + + ++ V + L ++ + V+RNG + + + E
Sbjct: 188 LLDEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQSV-IVIRNGKWVTIASDE 246
Query: 142 LVPGDIVEVNV--GCKIPADMRMIEMLSNQLRVDQAILTGES-----CSVEKELDSIIAT 194
LVPGDIV + +P D + LS V++++LTGES + D
Sbjct: 247 LVPGDIVSIPRPEEKTMPCDSVL---LSGSCIVNESMLTGESVPVLKFPIPDNGDDDEDL 303
Query: 195 NAVYQDKTNILFSGTVVVAGR-------ARAVVVGVGANTAMGSIRDSMLQTEDEVTPLK 247
K ++LF GT ++ R A+VV G +T+ G + S+L + V
Sbjct: 304 FLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFY 363
Query: 248 KKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAI--PE 305
K +F FLA V+A I + I+ G I +L + I P
Sbjct: 364 KDSFKFILFLA-VLALIGFIYTIIE----------LIKDGRPLGKIILRSLDIITIVVPP 412
Query: 306 GLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVV 365
LPA ++ + R+ + S + G V C DKTGTLT + + +
Sbjct: 413 ALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGL------DL 466
Query: 366 HSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCN-ESVLQY 424
VQ G++G F + +A C +L E L
Sbjct: 467 RGVQ--------GLSG------NQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVG 512
Query: 425 NP-DKGNYEKIG---EATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIE 480
+P DK +E G E + + + + + E
Sbjct: 513 DPLDKKMFEATGWTLEEDDES------AEPTSILAVVRT--------DDPPQ-------E 551
Query: 481 FKKVSILEFSRDRKMMSVLCSHKQMCVM--FSKGAPESVLSRCTNILCNDNGFIVPMTAN 538
+ +FS + MSV+ S F KGAPE++ S C + VP
Sbjct: 552 LSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLC-------SPETVP---- 600
Query: 539 IRAELESRLNSLAGKEALRCLALA---LKQMPINR-QTLSYDD-EKDLTFIGLVGMLDPP 593
++ + L S +E R LALA L ++ + + Q LS D E +LTF+G + +P
Sbjct: 601 --SDYQEVLKSYT-REGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPL 657
Query: 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESI---CHKIGAFDHLV-------------- 636
+ + K + A IR +++TGDN TA + C + + L+
Sbjct: 658 KPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQ 717
Query: 637 ------DFVGRSYT---------ASEFEELPAMQQTVA--------LQHMA--------- 664
D + + T E+L A + +A LQ +
Sbjct: 718 IKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLS 777
Query: 665 ---LFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSAS 721
+F R+ P K LVE LQ + V M GDG ND ALK+AD+GI++ A A+
Sbjct: 778 HTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEAEASV--AA 835
Query: 722 DMVLADDNFATIVAAVAEGRAIYNNTKQ----------------FIRYMISSNIGEVVCI 765
+ + + + EGR + Q I Y+I SN+G+ +
Sbjct: 836 PFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLIGSNLGDGQFL 895
Query: 766 FVAAVLGIPDTLAPVSLI 783
+ +L + PV+L+
Sbjct: 896 TIDLLL-----IFPVALL 908
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 158 bits (401), Expect = 7e-40
Identities = 121/355 (34%), Positives = 179/355 (50%), Gaps = 38/355 (10%)
Query: 21 TKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFF----LA 76
+GLT+ A ++ YG N + EK +L+ F++ + +L+ A ISFF L
Sbjct: 43 RQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLP 102
Query: 77 LINGE-TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFS 135
L GE T LT +IL ++ + + E + KA E L+A ATVLR G
Sbjct: 103 LRRGEETDLTGV---IIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAG 159
Query: 136 I------LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEK--- 186
+P ELVPGDIV ++ G IPAD+R+IE S L + QA+LTGE+ VEK
Sbjct: 160 AEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIE--SRDLFISQAVLTGEALPVEKYDT 217
Query: 187 -------ELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT 239
D++ D NI F GT VV+G A AVVV G+ T GS+ S++ T
Sbjct: 218 LGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVGT 277
Query: 240 EDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGA-IHYFKIAVAL 298
+ T + ++ L + + + +V ++N GF +G + A+A+
Sbjct: 278 RAQ-TAFDRGVNSVSWLLIRFMLVMVPVVLLIN----------GFTKGDWLEALLFALAV 326
Query: 299 AVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLT 353
AV PE LP +V++ LA G MAR +V+ L +++ G V+C+DKTGTLT
Sbjct: 327 AVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLT 381
|
Length = 903 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 8e-38
Identities = 103/360 (28%), Positives = 175/360 (48%), Gaps = 29/360 (8%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
A E+ F P GL +++V +G+N LP +K +W + + +
Sbjct: 46 CLKAAVMPEEELWKTFDTHPE-GLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNP 104
Query: 61 LVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRA 120
+L IS+ L A VI L++A + + I E + KA + L+A
Sbjct: 105 FNILLTILGAISYA------TEDLFAAG---VIALMVAISTLLNFIQEARSTKAADALKA 155
Query: 121 YQADIATVLRNGC------FSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQ 174
++ ATVLR + +P +LVPGDI+++ G IPAD+R+++ + L V Q
Sbjct: 156 MVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQ--ARDLFVAQ 213
Query: 175 AILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRD 234
A LTGES VEK + ++ + + F GT VV+G A+AVV+ GANT G +
Sbjct: 214 ASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAG 273
Query: 235 SMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGA-IHYFK 293
+ + + E ++ + L + + + +V ++N G+ +G
Sbjct: 274 RVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLIN----------GYTKGDWWEAAL 323
Query: 294 IAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLT 353
A+++AV PE LP +VT+ LA G ++++ IV+ L +++ G ++C+DKTGTLT
Sbjct: 324 FALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLT 383
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 149 bits (379), Expect = 3e-37
Identities = 85/291 (29%), Positives = 145/291 (49%), Gaps = 12/291 (4%)
Query: 481 FKKVSILEFSRDRKMMSVLCSHKQMC-VMFSKGAPESVLSRCTNILCNDNGFIVPMTANI 539
++KV L F R+ +SV+ Q ++ KGA E +L+ T++ D + P+
Sbjct: 439 YRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVR--DGDTVRPLDEAR 496
Query: 540 RAELESRLNSLAGKEALRCLALALKQMPIN--RQTLSYDDEKDLTFIGLVGMLDPPREEV 597
R L + + + R L +A +++P R S DE+DL G + LDPP+E
Sbjct: 497 RERLLALAEAY-NADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESA 555
Query: 598 KNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQT 657
A+ + G+ V V+TGDN IC ++G ++ G +E E +
Sbjct: 556 APAIAALRENGVAVKVLTGDNPIVTAKICREVG-----LE-PGEPLLGTEIEAMDDAALA 609
Query: 658 VALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVA 717
++ +F ++ P K +++ALQ V GDG+NDAPAL+ AD+GI++ SG +A
Sbjct: 610 REVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIA 669
Query: 718 KSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVA 768
K ++D++L + + + V +GR + N +++ SSN G V + VA
Sbjct: 670 KESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVA 720
|
Length = 903 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 145 bits (368), Expect = 5e-36
Identities = 84/267 (31%), Positives = 130/267 (48%), Gaps = 36/267 (13%)
Query: 510 SKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPIN 569
+KGAP+ +L LC++ I ++E +++ LA + R L +A
Sbjct: 384 TKGAPQVILD-----LCDNK-------KEIEEKVEEKVDELASR-GYRALGVART----- 425
Query: 570 RQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI 629
D+E F+GL+ + DPPR + K + G+ V +VTGD+ + A+ ++
Sbjct: 426 ------DEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRL 479
Query: 630 GAFDHLVDFVGRSYTASEFEELPAMQQTV-ALQHMAL----FTRVEPSHKRMLVEALQNQ 684
G ++ YTA + L M F V P HK +VE LQ +
Sbjct: 480 GLGTNI-------YTADVLLKGDNRDDLPSGLGEMVEDADGFAEVFPEHKYEIVEILQKR 532
Query: 685 NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIY 744
+V MTGDGVNDAPALKKAD+GIA+ T A+SA+D+VL + + IV A+ E R I+
Sbjct: 533 GHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIF 592
Query: 745 NNTKQFIRYMISSNIGEVVCIFVAAVL 771
K ++ Y I+ I V + ++
Sbjct: 593 QRMKSYVIYRIAETIRIVFFFGLLILI 619
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 5e-28
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 34/197 (17%)
Query: 582 TFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGR 641
+G++ + D R + K A+ + GI+V+++TGDN+ TAE+I ++G +D V
Sbjct: 527 KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELG-----IDEV-- 579
Query: 642 SYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPAL 701
+ P K +V LQ + VAM GDG+NDAPAL
Sbjct: 580 ------------------------RAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPAL 615
Query: 702 KKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGE 761
AD+GIAMGSGT VA A+D+VL D+ + + A+ RA KQ + + N
Sbjct: 616 AAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYN--- 672
Query: 762 VVCIFVAAVLGIPDTLA 778
+ I +AA + +A
Sbjct: 673 AIAIPLAAGGLLTPWIA 689
|
Length = 713 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 3e-26
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 23/112 (20%)
Query: 415 ALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCN 474
ALCN++ N +K E IG+ TE AL V AEK+G
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGDPTESALLVFAEKLG---------------------IDV 39
Query: 475 HHWEIEFKKVSILEFSRDRKMMSVLC--SHKQMCVMFSKGAPESVLSRCTNI 524
+ +V+ + F+ +RK MS + +F KGAPE +L RC+ I
Sbjct: 40 EELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 5e-25
Identities = 76/302 (25%), Positives = 125/302 (41%), Gaps = 36/302 (11%)
Query: 62 VKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAY 121
+ +L+A A I A G LE +++L + + + A AL L A
Sbjct: 1 MDLLMALATI---AAYAMGL-----VLEGALLLFLFLLGETLEERAKGRASDALSALLAL 52
Query: 122 QADIATVLR-NGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
A VL+ +G +P EL GDIV V G +IP D +I S VD++ LTGE
Sbjct: 53 APSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESE---VDESALTGE 109
Query: 181 SCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240
S VEK+ + F+GT+ G V +G ++ + I + + + +
Sbjct: 110 SMPVEKKEGDEV-------------FAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQ 156
Query: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
P+++ D ++ + I +L ++V GA+ A+A+ V
Sbjct: 157 SSKAPIQRLADRIASYYVPAVLAIALLTFVV-----------WLALGALGALYRALAVLV 205
Query: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
A P L + + AR +++ ++E L + DKTGTLTT +V
Sbjct: 206 VACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVV 265
Query: 361 KI 362
I
Sbjct: 266 DI 267
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 4e-24
Identities = 77/316 (24%), Positives = 129/316 (40%), Gaps = 40/316 (12%)
Query: 62 VKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAY 121
V +L+A A + A+ GE LE +++LL+ + + A +AL+ L
Sbjct: 1 VDLLMALAALG---AVAIGEY-----LEGALLLLLFSIGETLEEYASGRARRALKALMEL 52
Query: 122 QADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGES 181
D A VLR G + EL GD+V V G ++P D +LS VD++ LTGES
Sbjct: 53 APDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDG---VVLSGTSTVDESALTGES 109
Query: 182 CSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTED 241
VEK + F+G + + G VV + A++ + I + + + +
Sbjct: 110 VPVEKAPGDEV-------------FAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQS 156
Query: 242 EVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVA 301
++ +D F + V+ I + +W+V G L+ + A+ L V
Sbjct: 157 RKAKTQRFIDRFARYYTPVVLAIALAIWLV----------PGLLKRWPFWVYRALVLLVV 206
Query: 302 AIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAK 361
A P L AR +++ ++E L + DKTGTLTT V
Sbjct: 207 ASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVD 266
Query: 362 I------CVVHSVQQG 371
+ + + +Q
Sbjct: 267 VVPAEVLRLAAAAEQA 282
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-23
Identities = 78/309 (25%), Positives = 129/309 (41%), Gaps = 37/309 (11%)
Query: 59 DLLVKI-LIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEE 117
D LV + I A S + L F E ++++ + + + A +A+
Sbjct: 150 DTLVALATIGAYAYSLYATL-----FPVYFEEAAMLIFLFLLGRYLEARAKGRARRAIRA 204
Query: 118 LRAYQADIATVLR-NGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAI 176
L ATV+R +G +P E+ GDIV V G +IP D ++ S VD+++
Sbjct: 205 LLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS---SVDESM 261
Query: 177 LTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSM 236
LTGES VEK+ + F+GTV + G V VGA+T + I +
Sbjct: 262 LTGESLPVEKKPGDEV-------------FAGTVNLDGSLTIRVTRVGADTTLARIIRLV 308
Query: 237 LQTEDEVTPLKKKLDEFGTFLAK---VIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFK 293
+ + P+++ D ++ VIA + +W + G + +
Sbjct: 309 EEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGGDWETA-----------LY 357
Query: 294 IAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLT 353
A+A+ V A P L T + +G R AR +++ ++E L + DKTGTLT
Sbjct: 358 RALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLT 417
Query: 354 TNMMSVAKI 362
V +
Sbjct: 418 EGKPEVTDV 426
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 4e-23
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 40/194 (20%)
Query: 579 KDLTFIGLVGMLDPPREEVKNAMLSCMTAG-IRVIVVTGDNKSTAESICHKIGAFDHLVD 637
D +G++ + D R E K A+ + AG I+++++TGDN+S AE++ ++G +
Sbjct: 371 VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---- 426
Query: 638 FVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVND 697
+ + P K +V+ LQ + VVAM GDG+ND
Sbjct: 427 ---------------------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGIND 459
Query: 698 APALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISS 757
APAL AD+GIAMG+G+ VA A+D+VL +D+ +++ A+ R KQ
Sbjct: 460 APALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQ-------- 511
Query: 758 NIGEVVCIFVAAVL 771
N+ + + A+
Sbjct: 512 NLAWALGYNLVAIP 525
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 3e-22
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 31/180 (17%)
Query: 570 RQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI 629
T S + G++ + D + E K + + GI +++TGDN+ TA+++ ++
Sbjct: 392 GGTTSVLVAVNGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL 451
Query: 630 GAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVA 689
G + + V P K L++ LQ + +VVA
Sbjct: 452 GIEN-------------------------------VRAEVLPDDKAALIKKLQEKGKVVA 480
Query: 690 MTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQ 749
M GDG+NDAPAL +AD+GIA+G+GT VA A+D+VL ++ + A+ R KQ
Sbjct: 481 MVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQ 540
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 86.1 bits (214), Expect = 1e-20
Identities = 30/69 (43%), Positives = 43/69 (62%)
Query: 4 AYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVK 63
+ SV EVL G D KGLT+++ + YG N LP++K + WK+ L+QF D LV
Sbjct: 1 WHTLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVI 60
Query: 64 ILIAAAVIS 72
IL+ AA++S
Sbjct: 61 ILLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 97.4 bits (243), Expect = 1e-20
Identities = 118/530 (22%), Positives = 185/530 (34%), Gaps = 113/530 (21%)
Query: 327 AIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQG---PIIAEY---GVT 380
A VR+ E LG I SDKTGTLT N+M K + V G I + +
Sbjct: 345 ASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSI-AGVSYGDGFTEIKDGIRERLG 403
Query: 381 GTTYAPEGVVFDSSGIQLEFPA----------QLPCLLHIARCSALCNESVLQYNPDKGN 430
++ +S G P + ALC+ V ++N D G
Sbjct: 404 SYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDD-GP 462
Query: 431 YEKIGEAT---EVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSIL 487
E +A E AL A VG F+ P +S H E++ +++L
Sbjct: 463 EEITYQAASPDEAALVKAARDVGFVFFERTP---KSISLLIEM----HGETKEYEILNVL 515
Query: 488 EFSRDRKMMSVLCSHKQMCV-MFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESR 546
EF+ DRK MSV+ + + + KGA + R ++ N + E +
Sbjct: 516 EFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSS---GGN--------QVNEETKEH 564
Query: 547 LNSLAGKEALRCLALALKQMPINRQTL-----SYDD-------------------EKDLT 582
L + A E LR L +A ++ ++ + Y++ EKDL
Sbjct: 565 LENYA-SEGLRTLCIAYRE--LSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLI 621
Query: 583 FIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESI---CH--KIGAFDHLVD 637
+G + D +E V + AGI++ V+TGD TA +I C ++
Sbjct: 622 LLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVIT 681
Query: 638 FVGRSYTASEFEELP-----AMQQTVALQHMALFT------------------------- 667
T S + ++ L
Sbjct: 682 SDSLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLAL 741
Query: 668 --------RVEPSHKRMLVEALQNQNEVVAMT-GDGVNDAPALKKADIGIAM-GSGTAVA 717
RV PS K +V ++ + GDG ND +++AD+G+ + G A
Sbjct: 742 KCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQA 801
Query: 718 KSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFV 767
ASD + F T + V GR Y + I Y N+ + F
Sbjct: 802 VMASDFAIGQFRFLTKLLLV-HGRWSYKRISKMILYFFYKNLIFAIIQFW 850
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 95.4 bits (238), Expect = 2e-20
Identities = 74/317 (23%), Positives = 128/317 (40%), Gaps = 43/317 (13%)
Query: 58 DDLLVKILIAAA----VISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAE- 112
D L+ + A +++ + + F + S +L+ +G E A+
Sbjct: 20 MDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFIL---LGRWLEMLAKG 76
Query: 113 ---KALEELRAYQADIATVLR-NGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSN 168
AL +L Q AT+L +G +P L PGDIV V G KIP D +IE S
Sbjct: 77 RASDALSKLAKLQPSTATLLTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGES- 135
Query: 169 QLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTA 228
VD++++TGES V K++ + +GTV G G +T
Sbjct: 136 --EVDESLVTGESLPVPKKVGDPV-------------IAGTVNGTGSLVVRATATGEDTT 180
Query: 229 MGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVL---VWIVNIGHFRDPSHGGFL 285
+ I + Q + P+++ D+ + V+ I ++ +W++ F
Sbjct: 181 LAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLILGADFVF------- 233
Query: 286 RGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVIC 345
A+ AV + + A P L T +A+ T A+ +++ ++E +
Sbjct: 234 --ALEV---AVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVV 288
Query: 346 SDKTGTLTTNMMSVAKI 362
DKTGTLT +V +
Sbjct: 289 FDKTGTLTQGKPTVTDV 305
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 91.6 bits (228), Expect = 3e-19
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 37/198 (18%)
Query: 579 KDLTFIGLVGMLDPPREEVKNAMLSCMTAGI-RVIVVTGDNKSTAESICHKIGAFDHLVD 637
+D T++G + + D PR + A+ GI +V+++TGD ++ AE + ++G +D
Sbjct: 349 RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG-----ID 403
Query: 638 FVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVND 697
V H L P K +V+ L+ + VAM GDG+ND
Sbjct: 404 EV----------------------HAELL----PEDKLEIVKELREKYGPVAMVGDGIND 437
Query: 698 APALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMIS 756
APAL AD+GIAMG SG+ VA +D+VL +D+ + + A+ R T++ ++ +
Sbjct: 438 APALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARR----TRRIVKQNVV 493
Query: 757 SNIGEVVCIFVAAVLGIP 774
+G ++ + + A+ G+
Sbjct: 494 IALGIILLLILLALFGVL 511
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 81.9 bits (203), Expect = 4e-19
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLV 62
D +A S+ EVL+ D KGL+ + AR + YG N LP K+T+ L+QF + L+
Sbjct: 3 DWHALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNPLI 62
Query: 63 KILIAAAVISFFL 75
IL+AAAV+S L
Sbjct: 63 YILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 6e-18
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 33/173 (19%)
Query: 579 KDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF 638
++ +GL+ + D R + + A+ GI+ +++TGDN A +I ++G +D
Sbjct: 555 RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELG-----ID- 608
Query: 639 VGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDA 698
+ A + P K V L NQ+ +AM GDG+NDA
Sbjct: 609 ----FRAG----------------------LLPEDKVKAVTEL-NQHAPLAMVGDGINDA 641
Query: 699 PALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFI 751
PA+K A IGIAMGSGT VA +D L + + + RA + N +Q I
Sbjct: 642 PAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNI 694
|
Length = 741 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 84.8 bits (210), Expect = 8e-17
Identities = 58/191 (30%), Positives = 87/191 (45%), Gaps = 42/191 (21%)
Query: 584 IGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY 643
L+ + DP R + A+ AG R++++TGDN +TA +I + G
Sbjct: 642 AALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG------------- 688
Query: 644 TASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKK 703
+ + +A V P K ++ LQ+Q VAM GDG+NDAPAL +
Sbjct: 689 ----------IDEVIA--------GVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQ 730
Query: 704 ADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVV 763
AD+GIAMG G+ VA + + L + + A+A RA N KQ ++
Sbjct: 731 ADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQ-----------NLL 779
Query: 764 CIFVAAVLGIP 774
F+ LGIP
Sbjct: 780 GAFIYNSLGIP 790
|
Length = 834 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 81.9 bits (203), Expect = 5e-16
Identities = 47/122 (38%), Positives = 63/122 (51%), Gaps = 31/122 (25%)
Query: 608 GIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667
GI+ +++TGDN TA +I + G VD +F +A T
Sbjct: 463 GIKTVMITGDNPLTAAAIAAEAG-----VD---------DF--------------IAEAT 494
Query: 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLAD 727
P K L+ Q + +VAMTGDG NDAPAL +AD+G+AM SGT AK A++MV D
Sbjct: 495 ---PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLD 551
Query: 728 DN 729
N
Sbjct: 552 SN 553
|
Length = 681 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 80.2 bits (199), Expect = 2e-15
Identities = 47/122 (38%), Positives = 62/122 (50%), Gaps = 31/122 (25%)
Query: 608 GIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667
GI+ +++TGDN TA +I + G VD +F +A T
Sbjct: 461 GIKTVMITGDNPLTAAAIAAEAG-----VD---------DF--------------LAEAT 492
Query: 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLAD 727
P K L+ Q + +VAMTGDG NDAPAL +AD+G+AM SGT AK A +MV D
Sbjct: 493 ---PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLD 549
Query: 728 DN 729
N
Sbjct: 550 SN 551
|
Length = 679 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 78.8 bits (194), Expect = 5e-15
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 31/162 (19%)
Query: 608 GIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667
GI+ I++TGDN+ TA +I + G D + +
Sbjct: 462 GIKTIMITGDNRLTAAAIAAEAGVDDFIAE------------------------------ 491
Query: 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLAD 727
P K L+ Q + ++VAMTGDG NDAPAL +AD+G+AM SGT AK A++MV D
Sbjct: 492 -ATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLD 550
Query: 728 DNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAA 769
+ ++ V G+ + + I++++ + I A
Sbjct: 551 SDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAIIPAI 592
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 72.7 bits (179), Expect = 4e-13
Identities = 87/348 (25%), Positives = 138/348 (39%), Gaps = 78/348 (22%)
Query: 55 KQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLI------------------ 96
+ ++L + L IS+ L N G AF+ +++ L
Sbjct: 130 LKSENLPLITLAVMMAISWGLEQFNHPFGQLAFIATTLVGLYPIARKALRLIRSGSPFAI 189
Query: 97 --LAANAAVGV--ITETNAEKAL--------EELRAYQA---------------DIATVL 129
L + AA+G I T AE A+ E L Y A + AT L
Sbjct: 190 ETLMSVAAIGALFIGAT-AEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRL 248
Query: 130 RNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELD 189
R+G + A+L PGD++EV G ++PAD ++LS D++ LTGES VE+
Sbjct: 249 RDGEREEVAIADLRPGDVIEVAAGGRLPADG---KLLSPFASFDESALTGESIPVERATG 305
Query: 190 SIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKK 249
+ +G V V+ +A+ I + + E+ P+++
Sbjct: 306 EKVP-------------AGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERF 352
Query: 250 LDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGL-- 307
+D F I + +LV +V F P RG + L + P L
Sbjct: 353 IDRFSRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRG--------LTLLLIGCPCALVI 404
Query: 308 --PAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLT 353
PA +T+ LA +R A+++ ++E LG T + DKTGTLT
Sbjct: 405 STPAAITSGLAAAARR----GALIKGGAALEQLGRVTTVAFDKTGTLT 448
|
Length = 741 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 2e-12
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 532 IVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLD 591
+ + A + L + LR LA + R + DL +GL+ + D
Sbjct: 34 VAIVIAAGENLTKEGREELVRRLLLRALAGEELLEELLRAGATVVAVLDLVVLGLIALTD 93
Query: 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEEL 651
P + A+ AGI++ ++TGDN+ TA +I +G FD L V
Sbjct: 94 PLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDAL---VSADLYGLVGVGK 150
Query: 652 PAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKAD 705
P +P + +E L + E V M GDGVND PA K A
Sbjct: 151 P-----------------DPKIFELALEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 68.6 bits (167), Expect = 7e-12
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 31/188 (16%)
Query: 584 IGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY 643
+G++ + D ++ + GI ++ TGDN+ TA +I + G D V
Sbjct: 433 LGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV-DRFV------- 484
Query: 644 TASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKK 703
+P K ++ Q + +VAMTGDG NDAPAL +
Sbjct: 485 -----------------------AECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAE 521
Query: 704 ADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVV 763
A++G+AM SGT AK A++++ D N ++ V G+ + + I+++I +
Sbjct: 522 ANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYF 581
Query: 764 CIFVAAVL 771
I A +
Sbjct: 582 AILPAMFM 589
|
Length = 673 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 64.0 bits (155), Expect = 2e-10
Identities = 80/300 (26%), Positives = 131/300 (43%), Gaps = 27/300 (9%)
Query: 92 VILLILAANAAVGVITETNAEKALEELRAYQADIAT--VLRNGCFSILPAAELVPGDIVE 149
++LL L + E + LR Q ++ + ++G + ++ A++L G IV
Sbjct: 71 ILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVR 130
Query: 150 VNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGT 209
V G +IP D ++I+ L+ VD++ +TGES V KE D N++ GT
Sbjct: 131 VATGEQIPNDGKVIKGLAT---VDESAITGESAPVIKESGG---------DFDNVI-GGT 177
Query: 210 VVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVW 269
V + + V + + S D M+ + T KK +E F + I LV
Sbjct: 178 SVASD---WLEVEITSEPGH-SFLDKMIGLVEGATR-KKTPNEIALFTLLMTLTIIFLVV 232
Query: 270 IVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIV 329
I+ + + + +ALAV IP + +++ G R+ + N +
Sbjct: 233 ILTMYPLAKFLNFNL------SIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILA 286
Query: 330 RSLPSVETLGCTTVICSDKTGTLT-TNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEG 388
+S SVET G V+ DKTGT+T N M+ A I V S + + A Y + PEG
Sbjct: 287 KSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKAAYESSIADDTPEG 346
|
Length = 673 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 5e-10
Identities = 85/306 (27%), Positives = 129/306 (42%), Gaps = 51/306 (16%)
Query: 65 LIAAAVISFFLALINGETGLTAF-LEPSVILLI--LAANAAVGVITETNAEKALEELRAY 121
I ++ F L G G F L ++IL L AN A V E + + LR
Sbjct: 42 SILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAV-AEGRGKAQADSLRKT 100
Query: 122 QAD-IATVLRN-GCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTG 179
+ + IA +LR G ++PA EL GDIV V G IP+D +IE +++ VD++ +TG
Sbjct: 101 KTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVAS---VDESAITG 157
Query: 180 ESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ- 238
ES V +E ++ + GT V++ + + + AN + D M+
Sbjct: 158 ESAPVIRESGGDFSS----------VTGGTRVLSDW---LKIRITANPGETFL-DRMIAL 203
Query: 239 ---TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIA 295
E + TP + L L+ + + L+ + + F S GG +
Sbjct: 204 VEGAERQKTPNEIALT---ILLSGLT--LIFLLAVATLYPFAIYSGGGAASVT-----VL 253
Query: 296 VALAVAAIPEGLPAVVTTCLAL-------GTKRMARLNAIVRSLPSVETLGCTTVICSDK 348
VAL V IP TT L G R+ + N I S +VE G + DK
Sbjct: 254 VALLVCLIP-------TTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDK 306
Query: 349 TGTLTT 354
TGT+T
Sbjct: 307 TGTITL 312
|
Length = 681 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 1e-07
Identities = 73/271 (26%), Positives = 110/271 (40%), Gaps = 37/271 (13%)
Query: 91 SVILLI--LAANAAVGVITETNAEKALEELRAYQAD-IATVLR-NGCFSILPAAELVPGD 146
+ IL I L AN A V E + + L+ + A +LR +G +PA +L GD
Sbjct: 70 TGILFITVLFANFAEAV-AEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGD 128
Query: 147 IVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILF 206
IV V G IP D +IE +++ VD++ +TGES V KE A+ +
Sbjct: 129 IVLVEAGDVIPCDGEVIEGVAS---VDESAITGESAPVIKESGGDFAS----------VT 175
Query: 207 SGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ----TEDEVTPLKKKLDEFGTFLAKVIA 262
GT +++ +VV AN + D M+ + TP + L L V
Sbjct: 176 GGTRILSDW---LVVECTANPGETFL-DRMIALVEGAQRRKTPNEIALTILLIALTLVFL 231
Query: 263 GICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRM 322
+ +W G + VAL V IP + +++ G R+
Sbjct: 232 LVTATLWPF-----------AAYGGNAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV 280
Query: 323 ARLNAIVRSLPSVETLGCTTVICSDKTGTLT 353
N I S +VE G + DKTGT+T
Sbjct: 281 LGFNVIATSGRAVEACGDVDTLLLDKTGTIT 311
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 1e-06
Identities = 91/356 (25%), Positives = 129/356 (36%), Gaps = 98/356 (27%)
Query: 330 RSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICV--------VHSVQQGPIIAEYGVTG 381
R+L E LG + SDKTGTLT N M + Q V G
Sbjct: 442 RALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDG 501
Query: 382 TTYAPE-GVVFDSSGIQLEFPAQLPCLLHIARCS----------------ALCNESVLQY 424
P+ V D P LL +++ A CN V
Sbjct: 502 KILRPKMKVKVD------------PQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIV 549
Query: 425 NPDKGN-------YEKIGEA-TEVALRVLAEKVGLPGFDSMPSALNMLSKHERAS---YC 473
D + Y+ GE+ E AL A G ML ER S
Sbjct: 550 VDDTSDPTVKLMDYQ--GESPDEQALVYAAAAYGF-----------MLI--ERTSGHIVI 594
Query: 474 NHHWEIE-FKKVSILEFSRDRKMMSVLCSHKQMCV-MFSKGAPESVLSRCTNILCNDNGF 531
+ H E + F + + EF DRK MSV+ V +F KGA S+ S L
Sbjct: 595 DIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSL------ 648
Query: 532 IVPMTANIRAELESRLNSLAGKEALRCLALALKQMP------------------INRQTL 573
N+ E+ L++ + LR L + ++++ I R L
Sbjct: 649 ----NMNVIRATEAHLHTYS-SLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAAL 703
Query: 574 ----SYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESI 625
+ + E +LT +G + D ++ V A+ S TAGI+V V+TGD + TA SI
Sbjct: 704 LRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISI 759
|
Length = 1178 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 9e-06
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 675 RMLVEALQ-NQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDN 729
+ L + L + EV+A GDG ND L+ A +G+AMG+ + K+A+D V +N
Sbjct: 192 KALAKHLGIDLEEVIAF-GDGENDIEMLELAGLGVAMGNASPEVKAAADYVTGSNN 246
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 1e-05
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 677 LVEALQ-NQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDN 729
L EAL + +V+A GDG+ND L+ A G+AMG+ K+ +D V +N
Sbjct: 196 LAEALGISLEDVIAF-GDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNN 248
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 2e-05
Identities = 61/261 (23%), Positives = 101/261 (38%), Gaps = 45/261 (17%)
Query: 113 KALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRV 172
KALE+L A V+ + +P A++ PG ++ + G ++P D E+ + +
Sbjct: 312 KALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDG---EITQGEAWL 368
Query: 173 DQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSI 232
D+A+LTGE +K + V QD + +LF RA AV G++T + I
Sbjct: 369 DEAMLTGEPIPQQKGEGDSVHAGTVVQDGS-VLF--------RASAV----GSHTTLSRI 415
Query: 233 RDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYF 292
+ Q + + + D+ V+ I ++ AI YF
Sbjct: 416 IRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALV------------------SAAIWYF 457
Query: 293 -----KIAVALAVA------AIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCT 341
+I L +A A P L + G R A +VR +++
Sbjct: 458 FGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTL 517
Query: 342 TVICSDKTGTLTTNMMSVAKI 362
+ DKTGTLT V +
Sbjct: 518 DTLVFDKTGTLTEGKPQVVAV 538
|
Length = 834 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 47.5 bits (114), Expect = 2e-05
Identities = 45/131 (34%), Positives = 64/131 (48%), Gaps = 20/131 (15%)
Query: 69 AVISFFLALING---ETGLTAF-LEPSVILL--ILAANAAVGVITETNAE---KAL-EEL 118
++++ L + G F L ++ L +L AN A E AE KA + L
Sbjct: 43 SILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFA-----EALAEGRGKAQADSL 97
Query: 119 RAYQAD-IATVLR-NGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAI 176
R + D A LR G +PA EL GDIV V G IPAD +IE +++ VD++
Sbjct: 98 RGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVAS---VDESA 154
Query: 177 LTGESCSVEKE 187
+TGES V +E
Sbjct: 155 ITGESAPVIRE 165
|
Length = 679 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 5e-05
Identities = 27/140 (19%), Positives = 49/140 (35%), Gaps = 10/140 (7%)
Query: 572 TLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGA 631
TL D E + I + VK A+ GI++ + T ++ + ++G
Sbjct: 9 TL-LDSEPGIAEIEEL----ELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGL 63
Query: 632 FDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMT 691
D+ + + A + + P ++ L E V M
Sbjct: 64 DDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKP----NPDKLLAALKLLGVDPEEVLMV 119
Query: 692 GDGVNDAPALKKA-DIGIAM 710
GD +ND K A +G+A+
Sbjct: 120 GDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.9 bits (101), Expect = 1e-04
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 670 EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708
+P K ++ L+ + E V M G+G ND AL++AD+GI
Sbjct: 78 DPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGI 116
|
Length = 152 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 39.4 bits (92), Expect = 0.004
Identities = 30/138 (21%), Positives = 56/138 (40%), Gaps = 27/138 (19%)
Query: 607 AGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666
AG ++ +VT + + + +G D + +
Sbjct: 104 AGYKLGIVTNKPERELDILLKALG-LADYFDVI---VGGDDVPP---------------- 143
Query: 667 TRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKAD---IGIAMG--SGTAVAKSAS 721
+ +P +L+E L E M GD +ND A K A +G+ G S +A++ +
Sbjct: 144 PKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGA 203
Query: 722 DMVLADDNFATIVAAVAE 739
D+V+ D+ A ++A +AE
Sbjct: 204 DVVI--DSLAELLALLAE 219
|
Length = 220 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 787 | |||
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.95 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.84 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.65 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.56 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.56 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.56 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.55 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.54 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.5 | |
| PLN02887 | 580 | hydrolase family protein | 99.49 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.47 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.46 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.44 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.44 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.4 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.37 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.33 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.33 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.28 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.27 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.22 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.19 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.19 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.11 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.09 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.09 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.09 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.95 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.91 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.88 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.8 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.74 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.66 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.64 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.59 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.59 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.49 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.45 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.4 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.38 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.37 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.35 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.26 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.26 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.26 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.25 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.23 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.17 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.14 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.12 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.09 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.01 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.95 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.94 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.92 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.92 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.91 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.91 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.88 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.82 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.75 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.73 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.69 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.67 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.67 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.65 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.63 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.61 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 97.49 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.48 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.48 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.45 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.42 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.39 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.38 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.37 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.35 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.35 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 97.33 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 97.31 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.27 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.19 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 97.16 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 97.12 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.12 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 97.09 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 97.02 | |
| PLN02423 | 245 | phosphomannomutase | 97.01 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.97 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.96 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.94 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.93 | |
| PLN02940 | 382 | riboflavin kinase | 96.89 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.89 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.82 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.76 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.74 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 96.74 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.66 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 96.6 | |
| PLN02811 | 220 | hydrolase | 96.6 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 96.6 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.58 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 96.51 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.46 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 96.42 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 96.39 | |
| PLN03017 | 366 | trehalose-phosphatase | 96.29 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.26 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.22 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 96.06 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.03 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.93 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 95.93 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.9 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.69 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 95.68 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 95.5 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 95.39 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 95.31 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 95.27 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 95.26 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 95.18 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 95.12 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 95.03 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 94.89 | |
| PLN02580 | 384 | trehalose-phosphatase | 94.83 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 94.82 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 94.74 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 94.54 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 94.49 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 94.04 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 93.81 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 93.37 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 93.22 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 93.11 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 92.6 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 91.59 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 91.54 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 91.37 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 91.33 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 90.74 | |
| PLN02151 | 354 | trehalose-phosphatase | 90.5 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 90.09 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 89.6 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 87.93 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 87.18 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 85.89 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 85.86 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 85.15 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 84.87 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 84.85 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 84.8 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 83.61 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 81.03 |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-134 Score=1073.74 Aligned_cols=766 Identities=56% Similarity=0.828 Sum_probs=703.1
Q ss_pred CcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcC
Q 003909 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (787)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (787)
|+.+|+.+++|.+..+.+|++.|||.+|+.+|++.||+|+++.+...++|+.+++||.++++.+++.++++|+++.++
T Consensus 1 t~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~~-- 78 (972)
T KOG0202|consen 1 TEEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLADF-- 78 (972)
T ss_pred CcchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHhc--
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999988654
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccce
Q 003909 81 ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADM 160 (787)
Q Consensus 81 ~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~ 160 (787)
.++.+|.++++++..++++||+|++|+++.|+++.++.++|+|+|+.+.+++++|||||||.++-||+||||.
T Consensus 79 -------~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADl 151 (972)
T KOG0202|consen 79 -------DEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADL 151 (972)
T ss_pred -------ccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccce
Confidence 4778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCceEEecccccCCcccccccccccc-ccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccC
Q 003909 161 RMIEMLSNQLRVDQAILTGESCSVEKELDSII-ATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT 239 (787)
Q Consensus 161 ~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~-~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~ 239 (787)
++++. -++.+|||.|||||.|+.|...... .+....+++.|++|+||.|..|+++|+|+.||.+|.+|++.+.+.+.
T Consensus 152 Rl~e~--~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~ 229 (972)
T KOG0202|consen 152 RLIEA--KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQAT 229 (972)
T ss_pred eEEee--eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhcc
Confidence 99984 4499999999999999999877666 66788899999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCc-chhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 003909 240 EDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (787)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 318 (787)
++.++|+|++++.+...+..++.++|+.+|++.+.++.++.+.+ |++.+..+|..++++.++++|.+||+.++++++.+
T Consensus 230 e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG 309 (972)
T KOG0202|consen 230 ESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALG 309 (972)
T ss_pred CCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHh
Confidence 99999999999999999998899999999999888888777765 78889999999999999999999999999999999
Q ss_pred HHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccc
Q 003909 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (787)
Q Consensus 319 ~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (787)
.+||+|+++++|...+.|.||.+++||+|||||||+|+|.+.++++.+....+. .....+|..|+|.+..+.......
T Consensus 310 ~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~--~~f~~tg~ty~~~g~v~~~~~~~~ 387 (972)
T KOG0202|consen 310 TRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV--DEFNPTGTTYSPEGEVFKDGLYEK 387 (972)
T ss_pred HHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc--cccccCCceeCCCCceEecCcccc
Confidence 999999999999999999999999999999999999999999999987655443 566678889999988877765555
Q ss_pred cCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCcccc
Q 003909 399 EFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWE 478 (787)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (787)
+.....+.+.+++.+.++||++...+++. +.+...|.|+|.||..++++.|++..... ...+++ ....++.+.
T Consensus 388 ~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlaeKm~l~~~~~~-----~~s~~~-~~~c~~~~~ 460 (972)
T KOG0202|consen 388 DKAGDNDLLQELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAEKMGLPGTRST-----NLSNEE-ASACNRVYS 460 (972)
T ss_pred ccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHHHcCCCcchhh-----cccccc-cccchhHHH
Confidence 45557788999999999999999888776 77888999999999999999998764311 111222 335556677
Q ss_pred ccccEeEeecCCCCCceEEEEEeeCC---eeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhcccc
Q 003909 479 IEFKKVSILEFSRDRKMMSVLCSHKQ---MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEA 555 (787)
Q Consensus 479 ~~~~~l~~~~f~~~~~~~sviv~~~~---~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 555 (787)
..+++...+||+++||+|+|.|.++. ++.+|+||++|.|+++|+++..++++...|+++..|+.+.+...++++ +|
T Consensus 461 ~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~-~g 539 (972)
T KOG0202|consen 461 RLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGS-EG 539 (972)
T ss_pred HhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhh-cc
Confidence 78889999999999999999998743 478999999999999999998885557799999999999999999998 99
Q ss_pred chhhhhhhccCCc-cccCC------C-CCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Q 003909 556 LRCLALALKQMPI-NRQTL------S-YDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH 627 (787)
Q Consensus 556 ~~~l~~a~~~~~~-~~~~~------~-~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~ 627 (787)
+||+++|++..+. ..+.. . ...|.||+|+|++++.||+|++++++|+.|+++||+|.|+|||+..||.+||+
T Consensus 540 LRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r 619 (972)
T KOG0202|consen 540 LRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAR 619 (972)
T ss_pred ceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH
Confidence 9999999997763 21111 1 12289999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 003909 628 KIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG 707 (787)
Q Consensus 628 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg 707 (787)
++|+.....+..+.+++|.+++.+..++.........+|+|++|.+|.++|+.||+.|+.|+|.|||.||+|+||.||+|
T Consensus 620 ~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIG 699 (972)
T KOG0202|consen 620 EIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIG 699 (972)
T ss_pred HhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccc
Confidence 99999888778889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecC-CccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheec
Q 003909 708 IAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVN 786 (787)
Q Consensus 708 ia~~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~ 786 (787)
|||| +|++.+|++||+|+.|+|+..|..++++||.+|.|+++++.|.++.|++.++++++++.|++|.||+|+|+||+|
T Consensus 700 IAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiN 779 (972)
T KOG0202|consen 700 IAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWIN 779 (972)
T ss_pred eeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheee
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C
Q 003909 787 I 787 (787)
Q Consensus 787 l 787 (787)
|
T Consensus 780 l 780 (972)
T KOG0202|consen 780 L 780 (972)
T ss_pred e
Confidence 7
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-113 Score=1009.97 Aligned_cols=756 Identities=30% Similarity=0.483 Sum_probs=619.9
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCC
Q 003909 2 EDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGE 81 (787)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (787)
-.||..+++|+++.|++++.+|||++||++|+++||+|+++.++++++|+.+++||++++.+++++++++++++
T Consensus 5 ~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~------ 78 (1053)
T TIGR01523 5 NAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAM------ 78 (1053)
T ss_pred CchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHH------
Confidence 36999999999999999999999999999999999999999998889999999999999999999999998865
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCcccccee
Q 003909 82 TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMR 161 (787)
Q Consensus 82 ~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~ 161 (787)
..|.++++|+++++++..++.++++|++++++.|+++.+.+++|+|||++++|++++|||||||.|++||+||||++
T Consensus 79 ---~~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 79 ---HDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ---hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCceEEecccccCCcccccccccccc--ccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccC
Q 003909 162 MIEMLSNQLRVDQAILTGESCSVEKELDSII--ATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT 239 (787)
Q Consensus 162 il~~~~g~~~vdes~ltGEs~pv~k~~~~~~--~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~ 239 (787)
|++ ++++.||||+|||||.|+.|.+.... .......++.|++|+||.|.+|++.++|++||.+|.+|++.+++...
T Consensus 156 Li~--~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~ 233 (1053)
T TIGR01523 156 LIE--TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGD 233 (1053)
T ss_pred EEE--eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhh
Confidence 997 57899999999999999999875332 11233456789999999999999999999999999999999987543
Q ss_pred CC-----------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 003909 240 ED-----------------------------------EVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGF 284 (787)
Q Consensus 240 ~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (787)
+. .++|+++.+++++.++..+.++++++.+++...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---------- 303 (1053)
T TIGR01523 234 GGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---------- 303 (1053)
T ss_pred hhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------
Confidence 21 248999999999998888877777777664321
Q ss_pred hhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEE
Q 003909 285 LRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICV 364 (787)
Q Consensus 285 ~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~ 364 (787)
......+.++++++++++|.+||+.++++++.+.+||+++++++|+.+++|.||.+++||+|||||||+|+|+|++++.
T Consensus 304 -~~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~ 382 (1053)
T TIGR01523 304 -DVDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWI 382 (1053)
T ss_pred -hhhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEE
Confidence 0112455678899999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred ecccccCcceeEEeec--CccccCC-Cc---------------------cccCC--Cccc-cCC--CChhHHHHHHHHhh
Q 003909 365 VHSVQQGPIIAEYGVT--GTTYAPE-GV---------------------VFDSS--GIQL-EFP--AQLPCLLHIARCSA 415 (787)
Q Consensus 365 ~~~~~~~~~~~~~~~~--~~~~~~~-~~---------------------~~~~~--~~~~-~~~--~~~~~~~~~~~~~~ 415 (787)
.+... .... +..+.|+ +. ..... ..+. ..+ ...+.+..+..+..
T Consensus 383 ~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 455 (1053)
T TIGR01523 383 PRFGT-------ISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAA 455 (1053)
T ss_pred cCCce-------EEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence 53100 0000 0011111 00 00000 0000 000 01234567888889
Q ss_pred hcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCC-chhhhhhhhh-h--ccccccCccccccccEeEeecCCC
Q 003909 416 LCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDS-MPSALNMLSK-H--ERASYCNHHWEIEFKKVSILEFSR 491 (787)
Q Consensus 416 l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~-~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~f~~ 491 (787)
+||++....+...+.....|+|+|.||+.++.+.|+..... ....+..... + .......+.....|+++..+||+|
T Consensus 456 lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds 535 (1053)
T TIGR01523 456 LANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDS 535 (1053)
T ss_pred hccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCC
Confidence 99987654221122234568999999999999888642100 0000000000 0 000000011134678999999999
Q ss_pred CCceEEEEEeeC-C-eeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCcc
Q 003909 492 DRKMMSVLCSHK-Q-MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPIN 569 (787)
Q Consensus 492 ~~~~~sviv~~~-~-~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~ 569 (787)
+||+|+++++.+ + ++++|+||+||.|+++|+.+...+++...+++++.++.+.+.+++|+. +|+||+++|||.++..
T Consensus 536 ~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~-~GlRvLa~A~r~l~~~ 614 (1053)
T TIGR01523 536 EIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAA-EGLRVLAFASKSFDKA 614 (1053)
T ss_pred CCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHh-cCCeEEEEEEEECCch
Confidence 999999999864 3 478999999999999999876542334578999999999999999998 9999999999988643
Q ss_pred ccC---C-----C-CCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc---
Q 003909 570 RQT---L-----S-YDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD--- 637 (787)
Q Consensus 570 ~~~---~-----~-~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~--- 637 (787)
+.. . . ...|+|++|+|+++++|++|++++++|++|+++||+++|+|||+..+|.++|+++||......
T Consensus 615 ~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~ 694 (1053)
T TIGR01523 615 DNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDR 694 (1053)
T ss_pred hccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccc
Confidence 210 0 0 123789999999999999999999999999999999999999999999999999999743210
Q ss_pred ---cccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC-Cc
Q 003909 638 ---FVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SG 713 (787)
Q Consensus 638 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~-~~ 713 (787)
....+++|.+++.+.++++...+....||+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++|||||||| +|
T Consensus 695 ~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~g 774 (1053)
T TIGR01523 695 DEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGING 774 (1053)
T ss_pred cccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCc
Confidence 12468899999999988888888888999999999999999999999999999999999999999999999999 89
Q ss_pred cHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cC-CCchhHhhhheecC
Q 003909 714 TAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVL----GI-PDTLAPVSLISVNI 787 (787)
Q Consensus 714 ~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~----~~-~~~l~~~~~l~~~l 787 (787)
++.++++||+++.++++..|..++++||++++|+++++.|.++.|+..+++.+++.++ |. |.||+|+|+||+||
T Consensus 775 t~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inl 853 (1053)
T TIGR01523 775 SDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIM 853 (1053)
T ss_pred cHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988888 44 58999999999996
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-112 Score=996.83 Aligned_cols=714 Identities=43% Similarity=0.643 Sum_probs=630.3
Q ss_pred cccccCCHH--HHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhc
Q 003909 2 EDAYARSVV--EVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALIN 79 (787)
Q Consensus 2 ~~~~~~~~~--~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (787)
+.||..+.+ ++...+.+++..||+++|+.+|++.||+|+++..+..++|+.++.+|++++..+++.++.++++++.+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~ 100 (917)
T COG0474 21 ETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWV 100 (917)
T ss_pred ccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 467888899 999999999999999999999999999999999888899999999999999999999999998876542
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccc
Q 003909 80 GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPAD 159 (787)
Q Consensus 80 ~~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD 159 (787)
+.. .....++.+++++..+++++++|++++++++++..+.+++|+|||++++|++++|||||||++++||+||||
T Consensus 101 ~~~-----~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD 175 (917)
T COG0474 101 DAG-----VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPAD 175 (917)
T ss_pred ccC-----cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccc
Confidence 110 334567777888888999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeecCCceEEecccccCCccccccccccccccccCCC-CCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhcc
Q 003909 160 MRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQ-DKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (787)
Q Consensus 160 ~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~-~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~ 238 (787)
++++++ ..++||||+|||||.|+.|.+........+.. ++.|++|+||.+.+|++.++|++||.+|.+|++.+.+..
T Consensus 176 ~rLl~~--~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~ 253 (917)
T COG0474 176 LRLLES--SDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPT 253 (917)
T ss_pred eEEEEe--cCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhcc
Confidence 999984 33799999999999999999876654445554 789999999999999999999999999999999999988
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 003909 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (787)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 318 (787)
.....+|+++.++++..++..+.++++++.+++..+.... .+...|.++++++++++|.+||+.++++++.+
T Consensus 254 ~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~--------~~~~~~~~~v~l~va~IPegLp~~vti~la~g 325 (917)
T COG0474 254 KKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGN--------GLLESFLTALALAVAAVPEGLPAVVTIALALG 325 (917)
T ss_pred ccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--------cHHHHHHHHHHHHHhccccchHHHHHHHHHHH
Confidence 7778899999999999999999999888888877443221 14567889999999999999999999999999
Q ss_pred HHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecc-cccCcceeEEeecCccccCCCccccCCCcc
Q 003909 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHS-VQQGPIIAEYGVTGTTYAPEGVVFDSSGIQ 397 (787)
Q Consensus 319 ~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (787)
..+|+++++++|+++++|.||++++||+|||||||+|+|+|.+++..+. ... .+
T Consensus 326 ~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~--------------~~----------- 380 (917)
T COG0474 326 AQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDI--------------DD----------- 380 (917)
T ss_pred HHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccc--------------cc-----------
Confidence 9999999999999999999999999999999999999999999998741 100 00
Q ss_pred ccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccc
Q 003909 398 LEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHW 477 (787)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (787)
......+.+.+++..+++||+.....+ + .+..+||+|.|+++++++.|... .. +..
T Consensus 381 -~~~~~~~~~~~~l~~~~lc~~~~~~~~-~---~~~~gdptE~Al~~~a~~~~~~~-~~------------------~~~ 436 (917)
T COG0474 381 -KDLKDSPALLRFLLAAALCNSVTPEKN-G---WYQAGDPTEGALVEFAEKLGFSL-DL------------------SGL 436 (917)
T ss_pred -cccccchHHHHHHHHHHhcCccccccc-C---ceecCCccHHHHHHHHHhcCCcC-CH------------------HHH
Confidence 000123344567888899998766543 2 56689999999999999887632 00 122
Q ss_pred cccccEeEeecCCCCCceEEEEEee-CCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccc
Q 003909 478 EIEFKKVSILEFSRDRKMMSVLCSH-KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEAL 556 (787)
Q Consensus 478 ~~~~~~l~~~~f~~~~~~~sviv~~-~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 556 (787)
...++++..+||+|+||||||+++. ++++.+++||+||.|+++|++. +...+++++.++.+.+..+++++ +|+
T Consensus 437 ~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~-----~~~~~~~~~~~~~~~~~~~~la~-~gl 510 (917)
T COG0474 437 EVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI-----GELEPLTEEGLRTLEEAVKELAS-EGL 510 (917)
T ss_pred hhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc-----CcccccCHHHHHHHHHHHHHHHH-HHH
Confidence 3456789999999999999999984 5568999999999999999875 44567889999999999999998 999
Q ss_pred hhhhhhhccCCccccCCC-CCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCc
Q 003909 557 RCLALALKQMPINRQTLS-YDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHL 635 (787)
Q Consensus 557 ~~l~~a~~~~~~~~~~~~-~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~ 635 (787)
|++++|||..+..+.... .+.|+|+.|+|+++|+||+|++++++|+.|+++||+++|+|||+..||+++|+++|+....
T Consensus 511 Rvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~ 590 (917)
T COG0474 511 RVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEA 590 (917)
T ss_pred HHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCC
Confidence 999999997765544322 2448999999999999999999999999999999999999999999999999999987643
Q ss_pred cccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC-Ccc
Q 003909 636 VDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGT 714 (787)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~-~~~ 714 (787)
.. +.+++|.+++.+.++++...+.+..||||++|+||.++|+.+|+.|+.|+|+|||.||+||||+|||||||+ +|+
T Consensus 591 ~~--~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gt 668 (917)
T COG0474 591 ES--ALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGT 668 (917)
T ss_pred Cc--eeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHH
Confidence 21 458899999999999999999988999999999999999999999999999999999999999999999999 799
Q ss_pred HHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CchhHhhhheecC
Q 003909 715 AVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIP-DTLAPVSLISVNI 787 (787)
Q Consensus 715 ~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~-~~l~~~~~l~~~l 787 (787)
+.+|++||+++.++++..+..+++|||++|.|+++++.|.++.|+..+++++++.+++.+ .|+++.|++|+||
T Consensus 669 daak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inl 742 (917)
T COG0474 669 DAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINL 742 (917)
T ss_pred HHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999996
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-114 Score=919.91 Aligned_cols=718 Identities=34% Similarity=0.491 Sum_probs=624.5
Q ss_pred CCHHHHHHHhCCCCCCCCCH--HHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 003909 7 RSVVEVLDFFGVDPTKGLTD--SQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGL 84 (787)
Q Consensus 7 ~~~~~~~~~l~~~~~~GLs~--~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (787)
-++++|+++|++||..||+. +|..+|++.||.|.++++++++||+++|+.|.+...+++.+++++++.++++.. ...
T Consensus 101 gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~-g~~ 179 (1034)
T KOG0204|consen 101 GGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTP-GIE 179 (1034)
T ss_pred cCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccC-CCC
Confidence 46999999999999999986 889999999999999999999999999999999999999999999999988752 234
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeee
Q 003909 85 TAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQ-ADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMI 163 (787)
Q Consensus 85 ~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~-~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il 163 (787)
..|++++.|++.+++..++....+++.++..++|.+.. ..++.|+|||+.++|+..||++|||+.|+.||.+||||+++
T Consensus 180 ~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli 259 (1034)
T KOG0204|consen 180 DGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLI 259 (1034)
T ss_pred cccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEE
Confidence 58999999988888777778888888888888886443 34689999999999999999999999999999999999999
Q ss_pred eecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCC
Q 003909 164 EMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEV 243 (787)
Q Consensus 164 ~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~ 243 (787)
+ +.++.+|||++||||++++|.+. .++++++||++.+|.++++|+.+|.+|..|+++..+.....++
T Consensus 260 ~--gn~L~iDESSlTGESd~v~k~~~-----------~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~ 326 (1034)
T KOG0204|consen 260 Q--GNSLKIDESSLTGESDHVQKSLD-----------KDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEE 326 (1034)
T ss_pred e--ccceeEecccccCCCcceeccCC-----------CCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcC
Confidence 7 67899999999999999999863 3679999999999999999999999999999999999988899
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-----------CCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHH
Q 003909 244 TPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD-----------PSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVT 312 (787)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~ 312 (787)
+|+|-++++++..+..+.+.++.+.+++....+.. .+.....+.+..+|..++.++++++|.+||++++
T Consensus 327 tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVT 406 (1034)
T KOG0204|consen 327 TPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVT 406 (1034)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHH
Confidence 99999999999998888888777776665444321 0111135667788888889999999999999999
Q ss_pred HHHHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCcccc
Q 003909 313 TCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFD 392 (787)
Q Consensus 313 ~~~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (787)
+++++++++|.+.+.++|..+++|.+|+.++||.|||||||+|+|.|++.++.+..++... +.
T Consensus 407 LsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~------------~~----- 469 (1034)
T KOG0204|consen 407 LSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNS------------PK----- 469 (1034)
T ss_pred HHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccC------------cc-----
Confidence 9999999999999999999999999999999999999999999999999998765443210 00
Q ss_pred CCCccccCCCChhHHHH-HHHHhhhcccccccccCCC-CCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccc
Q 003909 393 SSGIQLEFPAQLPCLLH-IARCSALCNESVLQYNPDK-GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERA 470 (787)
Q Consensus 393 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 470 (787)
. ....+.+.. +..+.+......+...... ......|+|+|+||+.|..+.|.++..
T Consensus 470 --~-----~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~--------------- 527 (1034)
T KOG0204|consen 470 --S-----SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD--------------- 527 (1034)
T ss_pred --c-----ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHh---------------
Confidence 0 002233333 3344444333322222222 267788999999999999999876531
Q ss_pred cccCccccccccEeEeecCCCCCceEEEEEeeCCee-EEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHH
Q 003909 471 SYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMC-VMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNS 549 (787)
Q Consensus 471 ~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~~~~-~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (787)
.+.+.+.++.+||+|.||+|+++++.+++. ++|+||++|-|+.+|+.+.++ +|...+++++.+..+++.++.
T Consensus 528 ------~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~-~g~~~~~~e~~~~~~~~~Ie~ 600 (1034)
T KOG0204|consen 528 ------VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDS-NGELVPFNEDDRKSFKDVIEP 600 (1034)
T ss_pred ------hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECC-CCCEeeCCHHHHHHHHHHHHH
Confidence 124557789999999999999999975444 499999999999999999887 889999999999999999999
Q ss_pred hhccccchhhhhhhccCCcc----ccCCC-CCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHH
Q 003909 550 LAGKEALRCLALALKQMPIN----RQTLS-YDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAES 624 (787)
Q Consensus 550 ~~~~~g~~~l~~a~~~~~~~----~~~~~-~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ 624 (787)
|++ +|+||+|+||+++... .+... ...+.+++++|+++++||+||+++++|+.|+++||.|.|+|||+..||++
T Consensus 601 mA~-~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkA 679 (1034)
T KOG0204|consen 601 MAS-EGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKA 679 (1034)
T ss_pred HHH-hhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHH
Confidence 999 9999999999985432 11111 12278999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhC
Q 003909 625 ICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKA 704 (787)
Q Consensus 625 ~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A 704 (787)
||.+|||..+..+ ..++.|.+|.++.++++.+...+..|++|.+|.+|..+|+.++..|++|++.|||.||.|+|++|
T Consensus 680 IA~eCGILt~~~d--~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeA 757 (1034)
T KOG0204|consen 680 IARECGILTPGGD--FLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEA 757 (1034)
T ss_pred HHHHcccccCCCc--cceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhc
Confidence 9999999887543 46889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEecC-CccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhh
Q 003909 705 DIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLI 783 (787)
Q Consensus 705 ~vgia~~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l 783 (787)
|||.||| .|++.+|++||+|++|+|+.+|+.++++||+.|.++.|+++|.++-|+..++..|+++......||+++|+|
T Consensus 758 DVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlL 837 (1034)
T KOG0204|consen 758 DVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLL 837 (1034)
T ss_pred ccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHH
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecC
Q 003909 784 SVNI 787 (787)
Q Consensus 784 ~~~l 787 (787)
|+||
T Consensus 838 WVNL 841 (1034)
T KOG0204|consen 838 WVNL 841 (1034)
T ss_pred HHHH
Confidence 9996
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-111 Score=984.90 Aligned_cols=686 Identities=28% Similarity=0.460 Sum_probs=599.1
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCC
Q 003909 2 EDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGE 81 (787)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (787)
...++.+++|+++.|++++ +|||++||++|+++||+|+++.++++++|+.++++|+++++++++++++++++.
T Consensus 47 ~~~~~~~~~~v~~~l~~~~-~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~------ 119 (902)
T PRK10517 47 LKAAVMPEEELWKTFDTHP-EGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYAT------ 119 (902)
T ss_pred HHHHcCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH------
Confidence 4567889999999999996 699999999999999999999999989999999999999999999888888754
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeC------CeEEEeecCCCCCCcEEEecCCCc
Q 003909 82 TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN------GCFSILPAAELVPGDIVEVNVGCK 155 (787)
Q Consensus 82 ~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~------g~~~~i~~~~Lv~GDII~l~~G~~ 155 (787)
..|.++++++++++++.+++.++++|+++.++.|+++.+.+++|+|| |++++|++++|||||+|.|++||+
T Consensus 120 ---~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~ 196 (902)
T PRK10517 120 ---EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDM 196 (902)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCE
Confidence 35778889999999999999999999999999999999999999999 789999999999999999999999
Q ss_pred cccceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHH
Q 003909 156 IPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDS 235 (787)
Q Consensus 156 vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~ 235 (787)
|||||+|++ +..+.||||+|||||.|+.|.+++.........+++|.+|+||.+.+|.+.++|++||.+|.+|++.+.
T Consensus 197 IPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~ 274 (902)
T PRK10517 197 IPADLRILQ--ARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGR 274 (902)
T ss_pred EeeeEEEEE--cCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHH
Confidence 999999997 456899999999999999999876544444556788999999999999999999999999999999999
Q ss_pred hccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 003909 236 MLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCL 315 (787)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~ 315 (787)
+.+++.+++|+++.+++++.+++.++++++.++++++.... ..+...+.+++++++++|||+||+++++++
T Consensus 275 v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~---------~~~~~~l~~alsv~V~~~Pe~LP~~vt~~l 345 (902)
T PRK10517 275 VSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTK---------GDWWEAALFALSVAVGLTPEMLPMIVTSTL 345 (902)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc---------CCHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 99888889999999999999988888877777666543221 123456778899999999999999999999
Q ss_pred HHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCC
Q 003909 316 ALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSG 395 (787)
Q Consensus 316 ~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (787)
+.+..+|+|+|+++|+.+++|.||++|++|||||||||+|+|.|.++......
T Consensus 346 a~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~--------------------------- 398 (902)
T PRK10517 346 ARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGK--------------------------- 398 (902)
T ss_pred HHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCC---------------------------
Confidence 99999999999999999999999999999999999999999999876321000
Q ss_pred ccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCc
Q 003909 396 IQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (787)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (787)
... .+.....+|... . ...+||+|.|++.+++..+. +
T Consensus 399 -------~~~---~ll~~a~l~~~~--~--------~~~~~p~d~All~~a~~~~~-----------------------~ 435 (902)
T PRK10517 399 -------TSE---RVLHSAWLNSHY--Q--------TGLKNLLDTAVLEGVDEESA-----------------------R 435 (902)
T ss_pred -------CHH---HHHHHHHhcCCc--C--------CCCCCHHHHHHHHHHHhcch-----------------------h
Confidence 011 122222333211 0 12479999999998764320 0
Q ss_pred cccccccEeEeecCCCCCceEEEEEee-CCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccc
Q 003909 476 HWEIEFKKVSILEFSRDRKMMSVLCSH-KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKE 554 (787)
Q Consensus 476 ~~~~~~~~l~~~~f~~~~~~~sviv~~-~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (787)
.....|..+..+||++++|+|+++++. ++...+++||+||.++++|+++..+ |...+++++.++.+.+..++++. +
T Consensus 436 ~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~--~~~~~l~~~~~~~i~~~~~~~a~-~ 512 (902)
T PRK10517 436 SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHN--GEIVPLDDIMLRRIKRVTDTLNR-Q 512 (902)
T ss_pred hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcC--CCeecCCHHHHHHHHHHHHHHHh-c
Confidence 012356778899999999999999875 4567899999999999999987643 55678888888888888899998 9
Q ss_pred cchhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCC
Q 003909 555 ALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH 634 (787)
Q Consensus 555 g~~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~ 634 (787)
|+|++++|||.++..........|+|++|+|+++|+|++||+++++|++|+++||+++|+|||++.+|.++|+++||..
T Consensus 513 G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~- 591 (902)
T PRK10517 513 GLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA- 591 (902)
T ss_pred CCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc-
Confidence 9999999999876543322222368999999999999999999999999999999999999999999999999999963
Q ss_pred ccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCcc
Q 003909 635 LVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGT 714 (787)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~ 714 (787)
+.+++|.+++.+.++++...+.+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++||||||||+|+
T Consensus 592 -----~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gt 666 (902)
T PRK10517 592 -----GEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAV 666 (902)
T ss_pred -----cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcC
Confidence 457899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 715 AVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 715 ~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
+.+|++||+|+.++++..|.+++++||+++.|+++++.|.++.|+..++.++++.++..+.|++|+|+||+||
T Consensus 667 dvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl 739 (902)
T PRK10517 667 DIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNL 739 (902)
T ss_pred HHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888887775448999999999996
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-110 Score=992.89 Aligned_cols=729 Identities=32% Similarity=0.480 Sum_probs=618.6
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcC--
Q 003909 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING-- 80 (787)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 80 (787)
.||..+++|+++.|++|+.+|||++||++|+++||+|+++.++++++|+.++++|+++++++++++++++++.+.+..
T Consensus 16 ~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~ 95 (997)
T TIGR01106 16 DDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAST 95 (997)
T ss_pred CchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc
Confidence 489999999999999999999999999999999999999998888999999999999999999999999776644421
Q ss_pred --CCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCcccc
Q 003909 81 --ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPA 158 (787)
Q Consensus 81 --~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPa 158 (787)
......|+++++++++++++..++.++++|+++.++++.+..+.+++|+|||++++|++++|||||+|.|++||+|||
T Consensus 96 ~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPa 175 (997)
T TIGR01106 96 EEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPA 175 (997)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEee
Confidence 112246888889999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred ceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhcc
Q 003909 159 DMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (787)
Q Consensus 159 D~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~ 238 (787)
||++++ ++.+.||||+|||||.|+.|.+++. ...+.+..|++|+||.+.+|.+.++|++||.+|.+|++.+.+..
T Consensus 176 D~~il~--~~~l~VdeS~LTGES~pv~K~~~~~---~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 250 (997)
T TIGR01106 176 DLRIIS--AQGCKVDNSSLTGESEPQTRSPEFT---HENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASG 250 (997)
T ss_pred eEEEEE--ccCcEEEccccCCCCCceeccCCCc---ccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhh
Confidence 999997 4468999999999999999987532 22334678999999999999999999999999999999998888
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 003909 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (787)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 318 (787)
.+.+++|+++.++++..+++.+++++++++++++..... .+...+.+++++++++|||+||++++++++.+
T Consensus 251 ~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~ 321 (997)
T TIGR01106 251 LENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY---------TWLEAVIFLIGIIVANVPEGLLATVTVCLTLT 321 (997)
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CHHHHHHHHHHHHhhcCCccchHHHHHHHHHH
Confidence 777889999999999999988888877777666533221 23345677888999999999999999999999
Q ss_pred HHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccc
Q 003909 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (787)
Q Consensus 319 ~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (787)
..+|+++|+++|+.+++|.||+++++|||||||||+|+|.|.+++..+..+.. .+. +.+.+..
T Consensus 322 ~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~--------~~~-~~~~~~~-------- 384 (997)
T TIGR01106 322 AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEA--------DTT-EDQSGVS-------- 384 (997)
T ss_pred HHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEec--------CCc-cCCCCcc--------
Confidence 99999999999999999999999999999999999999999999875432211 000 0000000
Q ss_pred cCCCChhHHHHHHHHhhhcccccccccCCC---CCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCc
Q 003909 399 EFPAQLPCLLHIARCSALCNESVLQYNPDK---GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (787)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (787)
..........+..++++||++.+..+.+. ......|+|+|.|+++++.+.+... .
T Consensus 385 -~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~---------------------~ 442 (997)
T TIGR01106 385 -FDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSV---------------------M 442 (997)
T ss_pred -CCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCH---------------------H
Confidence 01112344467778889998755321111 0123468999999999987643211 0
Q ss_pred cccccccEeEeecCCCCCceEEEEEee----CCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhh
Q 003909 476 HWEIEFKKVSILEFSRDRKMMSVLCSH----KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLA 551 (787)
Q Consensus 476 ~~~~~~~~l~~~~f~~~~~~~sviv~~----~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (787)
.....++.+..+||+|+||+|++++.. ++++++|+||+||.|+++|+++.. +|...+++++.++.+.+.+++++
T Consensus 443 ~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~--~g~~~~l~~~~~~~~~~~~~~~a 520 (997)
T TIGR01106 443 EMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILI--HGKEQPLDEELKEAFQNAYLELG 520 (997)
T ss_pred HHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhc--CCCcccCCHHHHHHHHHHHHHHH
Confidence 112356788999999999999888753 246789999999999999998764 47778899999999999999999
Q ss_pred ccccchhhhhhhccCCccccCC----CCC----CCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHH
Q 003909 552 GKEALRCLALALKQMPINRQTL----SYD----DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE 623 (787)
Q Consensus 552 ~~~g~~~l~~a~~~~~~~~~~~----~~~----~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~ 623 (787)
+ +|+|++++|||.++.++... ..+ .|+|++|+|+++++||+|++++++|++|+++|++++|+|||++.+|.
T Consensus 521 ~-~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~ 599 (997)
T TIGR01106 521 G-LGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAK 599 (997)
T ss_pred h-cCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 8 99999999999886432111 111 17899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCccc--------------------cccccccchhhccCChHHHHHhhccc--eEEEecChhhHHHHHHHH
Q 003909 624 SICHKIGAFDHLVD--------------------FVGRSYTASEFEELPAMQQTVALQHM--ALFTRVEPSHKRMLVEAL 681 (787)
Q Consensus 624 ~~a~~~gi~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~p~~K~~~v~~l 681 (787)
++|+++|+...... ....+++|.+++.+.++++.+.+.+. .||+|++|+||.++|+.+
T Consensus 600 ~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~l 679 (997)
T TIGR01106 600 AIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGC 679 (997)
T ss_pred HHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHH
Confidence 99999999643210 01257889999999888888777654 499999999999999999
Q ss_pred hhCCCEEEEEcCCccCHHHHhhCCceEecC-CccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 682 QNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760 (787)
Q Consensus 682 ~~~~~~v~~vGDg~ND~~ml~~A~vgia~~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~ 760 (787)
|+.|++|+|+|||.||+|||++|||||||| +|++.+|++||+++.++++..|++++++||+++.|+++++.|.++.|+.
T Consensus 680 q~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~ 759 (997)
T TIGR01106 680 QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP 759 (997)
T ss_pred HHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999999999999999999999999999999 6899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 761 EVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
.+++.+++.+++.|.|++|+|+||+||
T Consensus 760 ~~~~~~~~~~~~~~~pl~~~qlL~inl 786 (997)
T TIGR01106 760 EITPFLIFIIANIPLPLGTITILCIDL 786 (997)
T ss_pred HHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 999999999999999999999999996
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-110 Score=976.87 Aligned_cols=686 Identities=29% Similarity=0.468 Sum_probs=598.2
Q ss_pred CcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcC
Q 003909 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (787)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (787)
|.+.|..+.+++++.|+++. +|||++|+.+|+++||+|+++.++++++|+.++++|+++++++++++++++++.
T Consensus 12 ~~~~~~~~~~~~~~~l~~~~-~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~----- 85 (867)
T TIGR01524 12 LLKESQMGKETLLRKLGVHE-TGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLT----- 85 (867)
T ss_pred HHHHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHH-----
Confidence 35789999999999999985 799999999999999999999988888999999999999999999888888755
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEe------CCeEEEeecCCCCCCcEEEecCCC
Q 003909 81 ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLR------NGCFSILPAAELVPGDIVEVNVGC 154 (787)
Q Consensus 81 ~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r------~g~~~~i~~~~Lv~GDII~l~~G~ 154 (787)
..|.++++++++++++..++.++++|++++++.|+++.+..++|+| ||++++|++++|||||+|.+++||
T Consensus 86 ----~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd 161 (867)
T TIGR01524 86 ----DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGD 161 (867)
T ss_pred ----hhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCC
Confidence 4677888999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred ccccceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHH
Q 003909 155 KIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRD 234 (787)
Q Consensus 155 ~vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~ 234 (787)
+|||||++++ +..+.||||+|||||.|+.|.+++.........+++|++|+||.+.+|.+.++|++||.+|.+|++.+
T Consensus 162 ~VPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~ 239 (867)
T TIGR01524 162 IIPADARVIS--ARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAI 239 (867)
T ss_pred EEcccEEEEe--cCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHH
Confidence 9999999997 45689999999999999999987644334556677899999999999999999999999999999999
Q ss_pred HhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 003909 235 SMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTC 314 (787)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~ 314 (787)
.+.+ .+.++|+++.+++++.++..++++++++.++++.... ..+...+.+++++++++|||+||++++++
T Consensus 240 ~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~---------~~~~~~~~~al~l~v~~iP~~Lp~~vt~~ 309 (867)
T TIGR01524 240 AATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMK---------GDWLEAFLFALAVAVGLTPEMLPMIVSSN 309 (867)
T ss_pred HhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhc---------CCHHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 8887 6678999999999999998888887777766543221 12345677889999999999999999999
Q ss_pred HHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCC
Q 003909 315 LALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSS 394 (787)
Q Consensus 315 ~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (787)
++.+..+|+|+|+++|+.+++|.||++|++|||||||||+|+|+|.++...+..
T Consensus 310 la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~-------------------------- 363 (867)
T TIGR01524 310 LAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE-------------------------- 363 (867)
T ss_pred HHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC--------------------------
Confidence 999999999999999999999999999999999999999999999887422100
Q ss_pred CccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccC
Q 003909 395 GIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCN 474 (787)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 474 (787)
.... +.....+++.. . ...+||+|.|++.++......
T Consensus 364 --------~~~~---~l~~a~l~~~~--~--------~~~~~p~~~Al~~~~~~~~~~---------------------- 400 (867)
T TIGR01524 364 --------TSER---VLKMAWLNSYF--Q--------TGWKNVLDHAVLAKLDESAAR---------------------- 400 (867)
T ss_pred --------CHHH---HHHHHHHhCCC--C--------CCCCChHHHHHHHHHHhhchh----------------------
Confidence 0111 22222222211 0 113599999999987643110
Q ss_pred ccccccccEeEeecCCCCCceEEEEEeeCC-eeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhcc
Q 003909 475 HHWEIEFKKVSILEFSRDRKMMSVLCSHKQ-MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGK 553 (787)
Q Consensus 475 ~~~~~~~~~l~~~~f~~~~~~~sviv~~~~-~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (787)
.....+..+..+||++++|+|+++++.++ ..++++||+||.++++|+++..+ |...+++++.++++.+.+++++.
T Consensus 401 -~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~--~~~~~l~~~~~~~i~~~~~~~a~- 476 (867)
T TIGR01524 401 -QTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFG--GAVVTLSESEKSELQDMTAEMNR- 476 (867)
T ss_pred -hHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcC--CceecCCHHHHHHHHHHHHHHHh-
Confidence 01234667888999999999999987644 57899999999999999987654 56668888888889999999998
Q ss_pred ccchhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCC
Q 003909 554 EALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD 633 (787)
Q Consensus 554 ~g~~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~ 633 (787)
+|+|++++|||+++..+.......|++++|+|+++|+|++||+++++|++|+++||+++|+|||+..+|.++|+++||..
T Consensus 477 ~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~ 556 (867)
T TIGR01524 477 QGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA 556 (867)
T ss_pred cCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 99999999999886543222222367999999999999999999999999999999999999999999999999999964
Q ss_pred CccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCc
Q 003909 634 HLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSG 713 (787)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~ 713 (787)
+.+++|.+++.+.++++...+.+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++|||||||++|
T Consensus 557 ------~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~g 630 (867)
T TIGR01524 557 ------NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTA 630 (867)
T ss_pred ------CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCc
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 714 TAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 714 ~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
++.+|++||+|+.++++..|++++++||++++|+++++.|.++.|+..++.++++.++..+.||+|+|+||+||
T Consensus 631 tdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl 704 (867)
T TIGR01524 631 ADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNL 704 (867)
T ss_pred cHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888888887668999999999996
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-110 Score=974.72 Aligned_cols=695 Identities=29% Similarity=0.436 Sum_probs=598.7
Q ss_pred CcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcC
Q 003909 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (787)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (787)
|.+.|+.+++|+++.|+++ .+|||++||++|+++||+|+++.++++++|+.+++||+++++++++++++++++.+.+..
T Consensus 24 ~~~~~~~~~~~v~~~l~~~-~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~ 102 (903)
T PRK15122 24 IAREAANSLEETLANLNTH-RQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLP 102 (903)
T ss_pred HHHHHhCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh
Confidence 4578999999999999999 589999999999999999999998888999999999999999999999999998865421
Q ss_pred -C-CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeC------CeEEEeecCCCCCCcEEEecC
Q 003909 81 -E-TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN------GCFSILPAAELVPGDIVEVNV 152 (787)
Q Consensus 81 -~-~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~------g~~~~i~~~~Lv~GDII~l~~ 152 (787)
. .....|.++++++++++++..++.+++++++++++.|+++.+..++|+|| |++++|++++|||||+|.|++
T Consensus 103 ~~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~ 182 (903)
T PRK15122 103 LRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSA 182 (903)
T ss_pred ccCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECC
Confidence 1 11246889999999999999999999999999999999999999999999 489999999999999999999
Q ss_pred CCccccceeeeeecCCceEEecccccCCccccccccc----------cccccccCCCCCCceEeeccEEecceEEEEEEE
Q 003909 153 GCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELD----------SIIATNAVYQDKTNILFSGTVVVAGRARAVVVG 222 (787)
Q Consensus 153 G~~vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~----------~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~ 222 (787)
||+|||||++++ ++.+.||||+|||||.|+.|.+. ..........+++|.+|+||.+.+|.+.++|++
T Consensus 183 Gd~IPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~a 260 (903)
T PRK15122 183 GDMIPADVRLIE--SRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVA 260 (903)
T ss_pred CCEEeeeEEEEE--cCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEE
Confidence 999999999997 45689999999999999999851 111123344567899999999999999999999
Q ss_pred ecchhhhhHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHh
Q 003909 223 VGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAA 302 (787)
Q Consensus 223 tg~~T~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 302 (787)
||.+|.+|++.+.+.+ .+.++++++.++++..++..+.+.++.+++++..... ..+...+.+++++++++
T Consensus 261 tG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~---------~~~~~~l~~aisl~V~~ 330 (903)
T PRK15122 261 TGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK---------GDWLEALLFALAVAVGL 330 (903)
T ss_pred eccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc---------CCHHHHHHHHHHHHHHH
Confidence 9999999999998877 5667899999999988887776666655554432221 12345677889999999
Q ss_pred cCCchHHHHHHHHHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCc
Q 003909 303 IPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGT 382 (787)
Q Consensus 303 ~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~ 382 (787)
|||+||++++++++.+..+|+|+|+++|+.+++|.||++|++|||||||||+|+|.|.+++..+..
T Consensus 331 ~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~-------------- 396 (903)
T PRK15122 331 TPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR-------------- 396 (903)
T ss_pred ccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC--------------
Confidence 999999999999999999999999999999999999999999999999999999999987632110
Q ss_pred cccCCCccccCCCccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhh
Q 003909 383 TYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALN 462 (787)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~ 462 (787)
....+..+ ..+++.. + ...+||+|.|++.++.+.+...
T Consensus 397 --------------------~~~~~l~~---a~l~s~~-----~-----~~~~~p~e~All~~a~~~~~~~--------- 434 (903)
T PRK15122 397 --------------------KDERVLQL---AWLNSFH-----Q-----SGMKNLMDQAVVAFAEGNPEIV--------- 434 (903)
T ss_pred --------------------ChHHHHHH---HHHhCCC-----C-----CCCCChHHHHHHHHHHHcCchh---------
Confidence 01112222 2222110 0 1147999999999988755311
Q ss_pred hhhhhccccccCccccccccEeEeecCCCCCceEEEEEee-CCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHH
Q 003909 463 MLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSH-KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRA 541 (787)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~-~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~ 541 (787)
....+..+..+||++.+++|+++++. ++++++++||+||.++++|+++.. +|...+++++.++
T Consensus 435 --------------~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~--~~~~~~l~~~~~~ 498 (903)
T PRK15122 435 --------------KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRD--GDTVRPLDEARRE 498 (903)
T ss_pred --------------hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhc--CCCeecCCHHHHH
Confidence 01245678899999999999999887 567889999999999999997653 4566788888889
Q ss_pred HHHHHHHHhhccccchhhhhhhccCCccccC--CCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCH
Q 003909 542 ELESRLNSLAGKEALRCLALALKQMPINRQT--LSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNK 619 (787)
Q Consensus 542 ~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~--~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~ 619 (787)
++.+..++++. +|+|++++|||.++..... .....|+|++|+|+++|+|++||+++++|++|+++||+++|+|||++
T Consensus 499 ~i~~~~~~~a~-~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~ 577 (903)
T PRK15122 499 RLLALAEAYNA-DGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNP 577 (903)
T ss_pred HHHHHHHHHHh-CCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCH
Confidence 99999999998 9999999999987643211 11123679999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHH
Q 003909 620 STAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAP 699 (787)
Q Consensus 620 ~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ 699 (787)
.+|.++|+++||.. +.+++|.+++.+.++++...+.+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|
T Consensus 578 ~tA~aIA~~lGI~~------~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaP 651 (903)
T PRK15122 578 IVTAKICREVGLEP------GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAP 651 (903)
T ss_pred HHHHHHHHHcCCCC------CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHH
Confidence 99999999999963 357899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhH
Q 003909 700 ALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAP 779 (787)
Q Consensus 700 ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~ 779 (787)
||++||||||||+|++.+|++||+|+.++++..|++++++||++++|+++++.|.++.|+..++.++++.++..+.|++|
T Consensus 652 ALk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~ 731 (903)
T PRK15122 652 ALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLA 731 (903)
T ss_pred HHHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888888888877789999
Q ss_pred hhhheecC
Q 003909 780 VSLISVNI 787 (787)
Q Consensus 780 ~~~l~~~l 787 (787)
+|+||+||
T Consensus 732 ~qil~~nl 739 (903)
T PRK15122 732 IHLLLQNL 739 (903)
T ss_pred HHHHHHHH
Confidence 99999996
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-109 Score=975.35 Aligned_cols=713 Identities=38% Similarity=0.589 Sum_probs=612.5
Q ss_pred cccccCCHHHHHHHhCCCCCCCCC-HHHHHHHHhhcCCCCCCCCcCccHHHHHHHHH-hHHHHHHHHHHHHHHHHHHhhc
Q 003909 2 EDAYARSVVEVLDFFGVDPTKGLT-DSQVARHVRIYGKNVLPQEKRTAFWKLVLKQF-DDLLVKILIAAAVISFFLALIN 79 (787)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~GLs-~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 79 (787)
+.||..|++|+++.|++|+..||| ++|+++|+++||+|+++.++++++|+.++++| ++++++++++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~---- 77 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFM---- 77 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHH----
Confidence 579999999999999999999999 99999999999999999988889999999999 999999999999988765
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccc
Q 003909 80 GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPAD 159 (787)
Q Consensus 80 ~~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD 159 (787)
..|.++++++++++++..++.++++++++.+++|.+..+.+++|+|||++++|++++|||||+|.|++||+||||
T Consensus 78 -----g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaD 152 (884)
T TIGR01522 78 -----GNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPAD 152 (884)
T ss_pred -----cchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeee
Confidence 356778888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeecCCceEEecccccCCcccccccccccccc-ccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhcc
Q 003909 160 MRMIEMLSNQLRVDQAILTGESCSVEKELDSIIAT-NAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (787)
Q Consensus 160 ~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~-~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~ 238 (787)
|++++ +..+.||||+|||||.|+.|.+++.... .....+++|++|+||.+.+|.+.++|++||.+|.+|++.+.+.+
T Consensus 153 g~ii~--g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~ 230 (884)
T TIGR01522 153 LRIVE--AVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQA 230 (884)
T ss_pred EEEEE--cCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhcc
Confidence 99997 3468999999999999999988653221 12345678999999999999999999999999999999999988
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 003909 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (787)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 318 (787)
++..++|+++.+++++.++.+++++++++.+++.+... ..+...+..++++++++|||+||++++++++.+
T Consensus 231 ~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~ 301 (884)
T TIGR01522 231 IEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQG---------KDWLEMFTISVSLAVAAIPEGLPIIVTVTLALG 301 (884)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------CCHHHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 88889999999999999988776655554444432211 123456778899999999999999999999999
Q ss_pred HHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccc
Q 003909 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (787)
Q Consensus 319 ~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (787)
.++|+++|+++|+.+++|.||++|++|||||||||+|+|.|.+++..+..... ..+..+.+.+....+.. ..
T Consensus 302 ~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~ 373 (884)
T TIGR01522 302 VLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTM-------LNAVSLNQFGEVIVDGD-VL 373 (884)
T ss_pred HHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEee-------ccCCccCCCCccccccc-cc
Confidence 99999999999999999999999999999999999999999999865432110 00111111111000000 00
Q ss_pred cCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCcccc
Q 003909 399 EFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWE 478 (787)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (787)
.....+.+..+..++.+|+++..... .....|+|+|.|++.++++.|... ..
T Consensus 374 -~~~~~~~~~~~l~~~~l~~~~~~~~~----~~~~~g~p~e~All~~~~~~~~~~-----------------------~~ 425 (884)
T TIGR01522 374 -HGFYTVAVSRILEAGNLCNNAKFRNE----ADTLLGNPTDVALIELLMKFGLDD-----------------------LR 425 (884)
T ss_pred -ccccCHHHHHHHHHHhhhCCCeecCC----CCCcCCChHHHHHHHHHHHcCcHh-----------------------HH
Confidence 00122345567777888998754321 113358999999999998766421 01
Q ss_pred ccccEeEeecCCCCCceEEEEEee--CCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccc
Q 003909 479 IEFKKVSILEFSRDRKMMSVLCSH--KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEAL 556 (787)
Q Consensus 479 ~~~~~l~~~~f~~~~~~~sviv~~--~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 556 (787)
..++.+..+||++++|+|+++++. ++++++|+||+||.|+..|+++... +|...+++++.++.+.+..++++. +|+
T Consensus 426 ~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~-~g~~~~l~~~~~~~i~~~~~~~a~-~G~ 503 (884)
T TIGR01522 426 ETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKK-DGKTLTLTQQQRDVIQEEAAEMAS-AGL 503 (884)
T ss_pred hhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhc-CCCeeeCCHHHHHHHHHHHHHHHh-cCC
Confidence 246778999999999999999876 5678999999999999999987654 466677888888889998999998 999
Q ss_pred hhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcc
Q 003909 557 RCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLV 636 (787)
Q Consensus 557 ~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~ 636 (787)
|++++||+.+ +.+++|+|+++++|++||+++++|++|+++|++++|+|||+..+|.++|+++|+....
T Consensus 504 rvl~~A~~~~-----------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~- 571 (884)
T TIGR01522 504 RVIAFASGPE-----------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKT- 571 (884)
T ss_pred EEEEEEEEcC-----------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-
Confidence 9999999865 3689999999999999999999999999999999999999999999999999997643
Q ss_pred ccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC-CccH
Q 003909 637 DFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTA 715 (787)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~-~~~~ 715 (787)
..+++|.+++.+.++++...+.+..+|+|++|++|.++++.+|+.|+.|+|+|||.||+||+++|||||||| ++++
T Consensus 572 ---~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~ 648 (884)
T TIGR01522 572 ---SQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTD 648 (884)
T ss_pred ---CceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCH
Confidence 346789999999999999999999999999999999999999999999999999999999999999999999 7899
Q ss_pred HHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 716 VAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 716 ~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
.++++||+++.++++..+.+++++||+++.|+++++.|.++.|+..+++.+++.+++.|.||+|+|+||+||
T Consensus 649 va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl 720 (884)
T TIGR01522 649 VAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINI 720 (884)
T ss_pred HHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999996
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-109 Score=978.83 Aligned_cols=713 Identities=34% Similarity=0.479 Sum_probs=601.8
Q ss_pred CHHHHHHHhCCCCCCCCC--HHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhc----CC
Q 003909 8 SVVEVLDFFGVDPTKGLT--DSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALIN----GE 81 (787)
Q Consensus 8 ~~~~~~~~l~~~~~~GLs--~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 81 (787)
+++|+++.|++|+++||| ++||++|+++||+|+++.++++++|+.++++|+++++++++++++++++++.+. ..
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 789999999999999999 999999999999999999989999999999999999999999999998876542 12
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccce
Q 003909 82 TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAY-QADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADM 160 (787)
Q Consensus 82 ~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~-~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~ 160 (787)
.....|+++++++++++++..+..++++++++..+++.+. .+.+++|+|||++++|++++|||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 2345788999988889999999999999999999999764 466899999999999999999999999999999999999
Q ss_pred eeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCC
Q 003909 161 RMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240 (787)
Q Consensus 161 ~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~ 240 (787)
++++ +..+.||||+|||||.|+.|.++ ..|++|+||.+.+|.+.++|++||.+|.+|++.+.+..++
T Consensus 203 ~li~--g~~l~VdES~LTGES~pv~K~~~-----------~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~ 269 (941)
T TIGR01517 203 VFIS--GLSLEIDESSITGESDPIKKGAP-----------KDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG 269 (941)
T ss_pred EEEE--cCcEEEEecccCCCCCcccccCC-----------CCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC
Confidence 9996 34899999999999999999864 2578999999999999999999999999999999887754
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cC-CCCC-----cchhhHHHHHHHHHHHHHHhcCCchHHHHHH
Q 003909 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHF-RD-PSHG-----GFLRGAIHYFKIAVALAVAAIPEGLPAVVTT 313 (787)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~-----~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~ 313 (787)
+++|+++.++++..++.+++++++++.++++...+ .. .+.. .....+...|..++++++++|||+||+++++
T Consensus 270 -~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti 348 (941)
T TIGR01517 270 -EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTI 348 (941)
T ss_pred -CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHH
Confidence 56799999999999998888777777666553221 10 0000 0012455678889999999999999999999
Q ss_pred HHHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccC
Q 003909 314 CLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDS 393 (787)
Q Consensus 314 ~~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (787)
+++.+..+|+++|+++|+.+++|.||++|++|||||||||+|+|.|.+++..+...... + . ..
T Consensus 349 ~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~--------~-------~-~~- 411 (941)
T TIGR01517 349 ALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVR--------D-------V-LR- 411 (941)
T ss_pred HHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecC--------c-------c-cc-
Confidence 99999999999999999999999999999999999999999999999987643211100 0 0 00
Q ss_pred CCccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhcccccc
Q 003909 394 SGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYC 473 (787)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 473 (787)
. ......++......|++.......+.+.....++|+|.|+++++++.|.+..
T Consensus 412 ---~-----~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~------------------- 464 (941)
T TIGR01517 412 ---N-----VPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQ------------------- 464 (941)
T ss_pred ---c-----CCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHH-------------------
Confidence 0 0112333444444454432211111222345689999999999987664310
Q ss_pred CccccccccEeEeecCCCCCceEEEEEeeC-CeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhc
Q 003909 474 NHHWEIEFKKVSILEFSRDRKMMSVLCSHK-QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAG 552 (787)
Q Consensus 474 ~~~~~~~~~~l~~~~f~~~~~~~sviv~~~-~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (787)
.....++.+..+||++++|+|+++++.+ +++++++||+||.++++|+.+... +|...++++ .++.+.+.++++++
T Consensus 465 --~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~-~g~~~~~~~-~~~~i~~~~~~~a~ 540 (941)
T TIGR01517 465 --EVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDS-NGEATPISD-DKDRCADVIEPLAS 540 (941)
T ss_pred --HHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhc-CCCcccCcH-HHHHHHHHHHHHHh
Confidence 0112456678899999999999999875 458899999999999999876533 456566766 67888888999998
Q ss_pred cccchhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCC
Q 003909 553 KEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF 632 (787)
Q Consensus 553 ~~g~~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~ 632 (787)
+|+|++++||+.++.++.......|+|++|+|+++++|++|++++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 541 -~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~ 619 (941)
T TIGR01517 541 -DALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGIL 619 (941)
T ss_pred -cCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence 9999999999988643322111226899999999999999999999999999999999999999999999999999997
Q ss_pred CCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC-
Q 003909 633 DHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG- 711 (787)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~- 711 (787)
... ..+++|.+++.+.++++...+.+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++||||||||
T Consensus 620 ~~~----~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~ 695 (941)
T TIGR01517 620 TFG----GLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGI 695 (941)
T ss_pred CCC----ceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCC
Confidence 543 357889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 712 SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 712 ~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
+|++.++++||+++.++++..|.+++++||+++.|+++++.|.+++|+..+++.+++.+++.|.|++|+|+||+||
T Consensus 696 ~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl 771 (941)
T TIGR01517 696 SGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNL 771 (941)
T ss_pred CccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999996
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-104 Score=936.69 Aligned_cols=723 Identities=61% Similarity=0.926 Sum_probs=599.3
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhhc-CCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeC
Q 003909 53 VLKQFDDLLVKILIAAAVISFFLALIN-GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN 131 (787)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~ 131 (787)
+++||++++++++++++++++++++.. +......|+++++++++++++..++.++++|+++.+++|+++.+.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 368999999999999999999887653 1223457999999999999999999999999999999999999999999999
Q ss_pred CeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEE
Q 003909 132 GCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVV 211 (787)
Q Consensus 132 g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v 211 (787)
|++++|++++|||||+|.|++||+|||||++++ ++.+.||||+|||||.|+.|.++........+.+++|++|+||.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~--~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v 158 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLS--LKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLV 158 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEE--ecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEE
Confidence 999999999999999999999999999999997 347999999999999999998764433334455678999999999
Q ss_pred ecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CCcchhhHHH
Q 003909 212 VAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPS-HGGFLRGAIH 290 (787)
Q Consensus 212 ~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 290 (787)
.+|++.++|++||.+|.+|++.+.+..++.+++|+++.+++++.++..++++++++.|+++...+..+. ...|+..+..
T Consensus 159 ~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 238 (917)
T TIGR01116 159 VAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIY 238 (917)
T ss_pred ecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHH
Confidence 999999999999999999999999988888899999999999999988888877777766543322211 1234455556
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccc
Q 003909 291 YFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQ 370 (787)
Q Consensus 291 ~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~ 370 (787)
.+..+++++++++|++||++++++++.+.++|+++++++|+.+++|.||++|++|||||||||+|+|+|.+++..+..+.
T Consensus 239 ~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~ 318 (917)
T TIGR01116 239 YFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSS 318 (917)
T ss_pred HHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccc
Confidence 67778889999999999999999999999999999999999999999999999999999999999999999987654321
Q ss_pred CcceeEEeecCccccCCCccccCCCccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcC
Q 003909 371 GPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVG 450 (787)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g 450 (787)
.. ...+..+..++|.+........ ......+....+..++++||++.+..+.+.+.....|+|+|.|++.++++.|
T Consensus 319 ~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g 394 (917)
T TIGR01116 319 SL--NEFCVTGTTYAPEGGVIKDDGP--VAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMG 394 (917)
T ss_pred cc--ceEEecCCccCCCccccccCCc--ccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcC
Confidence 10 1222334444443321111000 0001234456778888999987654322222233468999999999999988
Q ss_pred CCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCC
Q 003909 451 LPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNG 530 (787)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~ 530 (787)
+......+..+...... ....+...|+++..+||+|+||+|||+++.++++.+|+||+||.|++.|++++.+ +|
T Consensus 395 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~-~g 468 (917)
T TIGR01116 395 LPATKNGVSSKRRPALG-----CNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNG-DG 468 (917)
T ss_pred CCchhcccccccccccc-----hhHHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecC-CC
Confidence 76542211111110000 0011234678899999999999999999988888999999999999999987755 56
Q ss_pred ccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccC------CC-CCCCCCcEEEEEeccCCCCChhHHHHHHH
Q 003909 531 FIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQT------LS-YDDEKDLTFIGLVGMLDPPREEVKNAMLS 603 (787)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~------~~-~~~e~~l~~lG~i~~~d~~~~~~~~~i~~ 603 (787)
...+++++.++++.+.++++++++|+||+++|||.++.+... .. ...|+|++|+|+++++||+|++++++|++
T Consensus 469 ~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~ 548 (917)
T TIGR01116 469 RAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEK 548 (917)
T ss_pred CeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHH
Confidence 778899999999999999998558999999999998643211 01 11278999999999999999999999999
Q ss_pred HHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhh
Q 003909 604 CMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQN 683 (787)
Q Consensus 604 l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 683 (787)
|+++|++++|+|||+..+|.++|+++|+...........++|.+++.+.+++......+..||+|++|+||.++++.+|+
T Consensus 549 l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~ 628 (917)
T TIGR01116 549 CRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQE 628 (917)
T ss_pred HHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHh
Confidence 99999999999999999999999999997643332334678888888888888888888899999999999999999999
Q ss_pred CCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 684 QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVV 763 (787)
Q Consensus 684 ~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~ 763 (787)
.|+.|+|+|||.||++||++|||||||++|++.+|++||+++.++++..+.+++++||+++.|+++++.|.++.|+..++
T Consensus 629 ~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~ 708 (917)
T TIGR01116 629 QGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVV 708 (917)
T ss_pred cCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHhhhheecC
Q 003909 764 CIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 764 ~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
+.+++.+++.|.||+|+|++|+|+
T Consensus 709 ~~~~~~~~~~~~pl~~~qll~inl 732 (917)
T TIGR01116 709 CIFLTAALGIPEGLIPVQLLWVNL 732 (917)
T ss_pred HHHHHHHHcCCchHHHHHHHHHHH
Confidence 999999999999999999999995
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-103 Score=909.88 Aligned_cols=633 Identities=32% Similarity=0.481 Sum_probs=547.0
Q ss_pred CCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHHHH
Q 003909 23 GLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAA 102 (787)
Q Consensus 23 GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~ 102 (787)
|||++||++|+++||+|+++.++ +++|+.|+++|++++.+++++++++++++ +.|.++++++++++++..
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~lL~~aa~~s~~~---------~~~~~~~~i~~~~~i~~~ 70 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKK-VSPLLKFLGFFWNPLSWVMEAAAIIAIAL---------ENWVDFVIILGLLLLNAT 70 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhh---------cchhhhhhhhhhhHHHHH
Confidence 89999999999999999999854 46789999999999999999998888765 357788889999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceEEecccccCCcc
Q 003909 103 VGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESC 182 (787)
Q Consensus 103 l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~vdes~ltGEs~ 182 (787)
+++++++++++.++.|+++.+.+++|+|||++++|++++|||||+|.|++||+|||||++++ +..+.||||+|||||.
T Consensus 71 i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~--g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 71 IGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFE--GDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEe--cCceEEEcccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999996 3348999999999999
Q ss_pred ccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHHHHHHHHHHHHH
Q 003909 183 SVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIA 262 (787)
Q Consensus 183 pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (787)
|+.|.+ +|.+|+||.+.+|.+.++|++||.+|.+|++.+.+.+++.+++++++.+++++.+++++++
T Consensus 149 PV~K~~-------------~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~ 215 (755)
T TIGR01647 149 PVTKKT-------------GDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIG 215 (755)
T ss_pred ceEecc-------------CCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999986 5679999999999999999999999999999999988888889999999999999999888
Q ss_pred HHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccccccccccccccCCee
Q 003909 263 GICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTT 342 (787)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~lg~v~ 342 (787)
+++++.+++++.... ..+...+.+++++++++|||+||++++++++.+.++|+|+|+++|+.+++|.||.+|
T Consensus 216 ~~~~i~~~~~~~~~~--------~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~ 287 (755)
T TIGR01647 216 VLVLIELVVLFFGRG--------ESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMD 287 (755)
T ss_pred HHHHHHHHHHHHHcC--------CCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCc
Confidence 888887776654221 123456778899999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChhHHHHHHHHhhhcccccc
Q 003909 343 VICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVL 422 (787)
Q Consensus 343 ~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 422 (787)
++|||||||||+|+|.|.+++..+... .... +.....+|++.
T Consensus 288 ~i~~DKTGTLT~~~~~v~~~~~~~~~~---------------------------------~~~~---~l~~a~~~~~~-- 329 (755)
T TIGR01647 288 ILCSDKTGTLTLNKLSIDEILPFFNGF---------------------------------DKDD---VLLYAALASRE-- 329 (755)
T ss_pred EEEecCCCccccCceEEEEEEecCCCC---------------------------------CHHH---HHHHHHHhCCC--
Confidence 999999999999999999987542100 0111 22233344321
Q ss_pred cccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEee
Q 003909 423 QYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSH 502 (787)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~ 502 (787)
..+||+|.|+++++++.+. ....++.+..+||++.+|+|+++++.
T Consensus 330 ----------~~~~pi~~Ai~~~~~~~~~-------------------------~~~~~~~~~~~pf~~~~k~~~~~v~~ 374 (755)
T TIGR01647 330 ----------EDQDAIDTAVLGSAKDLKE-------------------------ARDGYKVLEFVPFDPVDKRTEATVED 374 (755)
T ss_pred ----------CCCChHHHHHHHHHHHhHH-------------------------HHhcCceEEEeccCCCCCeEEEEEEe
Confidence 1359999999998764320 01245677889999999999998876
Q ss_pred C--CeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccCCCCCCCCC
Q 003909 503 K--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKD 580 (787)
Q Consensus 503 ~--~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~e~~ 580 (787)
+ ++.++++||+||.+++.|++. ...++++.+.+++++. +|+|++++|++. .|.+
T Consensus 375 ~~~g~~~~~~kGa~e~il~~c~~~------------~~~~~~~~~~~~~~~~-~G~rvl~vA~~~-----------~e~~ 430 (755)
T TIGR01647 375 PETGKRFKVTKGAPQVILDLCDNK------------KEIEEKVEEKVDELAS-RGYRALGVARTD-----------EEGR 430 (755)
T ss_pred CCCceEEEEEeCChHHHHHhcCCc------------HHHHHHHHHHHHHHHh-CCCEEEEEEEEc-----------CCCC
Confidence 3 667789999999999999641 2345667777888887 999999999872 1578
Q ss_pred cEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhh
Q 003909 581 LTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660 (787)
Q Consensus 581 l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (787)
++|+|+++|+|++||+++++|++|+++|++++|+|||++.+|+++|+++||..... .......+.+.+.+.++++.+.+
T Consensus 431 l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~-~~~~l~~~~~~~~~~~~~~~~~~ 509 (755)
T TIGR01647 431 WHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIY-TADVLLKGDNRDDLPSGELGEMV 509 (755)
T ss_pred cEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCc-CHHHhcCCcchhhCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999975321 11122344455667777888888
Q ss_pred ccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHH
Q 003909 661 QHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEG 740 (787)
Q Consensus 661 ~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~g 740 (787)
.+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|+|++|||||||++|++.+|++||+|+.++++..|.+++++|
T Consensus 510 ~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~g 589 (755)
T TIGR01647 510 EDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILES 589 (755)
T ss_pred HhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 741 RAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 741 R~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
|++++|+++++.|.++.|+..+++.+++.++ ++.||+|+|+||+||
T Consensus 590 R~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~-~~~~l~~~~il~~~l 635 (755)
T TIGR01647 590 RKIFQRMKSYVIYRIAETIRIVFFFGLLILI-LNFYFPPIMVVIIAI 635 (755)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHH-hCcchhHHHHHHHHH
Confidence 9999999999999999999888766665542 334599999999986
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-99 Score=901.86 Aligned_cols=690 Identities=23% Similarity=0.306 Sum_probs=540.4
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHH
Q 003909 21 TKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAAN 100 (787)
Q Consensus 21 ~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~ 100 (787)
..|||++|+.+|++.||+|+++.+. +++|++++++|.++++++++++.+++++. .+|+++++++++++++
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~---------~~~~~~~~i~~i~~~~ 206 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLD---------EYYYYSLCIVFMSSTS 206 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhh---------hhHHHHHHHHHHHHHH
Confidence 5799999999999999999999865 68999999999999998887764444321 4677888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEec--CCCccccceeeeeecCCceEEeccccc
Q 003909 101 AAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVN--VGCKIPADMRMIEMLSNQLRVDQAILT 178 (787)
Q Consensus 101 ~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~--~G~~vPaD~~il~~~~g~~~vdes~lt 178 (787)
..+..++++|+.+.++++.. .+..++|+|||+|++|++++|||||||.|+ +|++|||||+|++ |+|.||||+||
T Consensus 207 ~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~---g~~~VdES~LT 282 (1054)
T TIGR01657 207 ISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS---GSCIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe---CcEEEeccccc
Confidence 99999999999988888754 456899999999999999999999999999 9999999999996 68999999999
Q ss_pred CCcccccccccccc--c---cccCCCCCCceEeeccEEec-------ceEEEEEEEecchhhhhHHHHHhccCCCCCCch
Q 003909 179 GESCSVEKELDSII--A---TNAVYQDKTNILFSGTVVVA-------GRARAVVVGVGANTAMGSIRDSMLQTEDEVTPL 246 (787)
Q Consensus 179 GEs~pv~k~~~~~~--~---~~~~~~~~~~~l~~Gt~v~~-------g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~ 246 (787)
|||.|+.|.+.+.. . ......+++|++|+||.+++ |.+.++|++||.+|..|++.+.+...+...+++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999875321 1 01123467899999999985 789999999999999999999998887788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhcc
Q 003909 247 KKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLN 326 (787)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~ 326 (787)
++...++...+..++++..++.++... .. . ..+...+..+++++++++|++||++++++++.+..||+|++
T Consensus 363 ~~~~~~~~~~l~~~a~i~~i~~~~~~~-~~-~-------~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~ 433 (1054)
T TIGR01657 363 YKDSFKFILFLAVLALIGFIYTIIELI-KD-G-------RPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKG 433 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-Hc-C-------CcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCC
Confidence 888777765554433332222222111 11 1 13456677889999999999999999999999999999999
Q ss_pred ccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChhH
Q 003909 327 AIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPC 406 (787)
Q Consensus 327 i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (787)
++|+++.++|.+|++|++|||||||||+|+|.|.+++..+...... .. .... ....
T Consensus 434 il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~--------~~-------~~~~---------~~~~ 489 (1054)
T TIGR01657 434 IFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFL--------KI-------VTED---------SSLK 489 (1054)
T ss_pred EEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccc--------cc-------cccc---------cccC
Confidence 9999999999999999999999999999999999998654211100 00 0000 0011
Q ss_pred HHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEe
Q 003909 407 LLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSI 486 (787)
Q Consensus 407 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 486 (787)
...+..+++.||+.... ++ ...|||.|.|+++++ |+............. ...... .......+++++.
T Consensus 490 ~~~~~~~~a~C~~~~~~----~~--~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~--~~~~i~-~~~~~~~~~il~~ 557 (1054)
T TIGR01657 490 PSITHKALATCHSLTKL----EG--KLVGDPLDKKMFEAT---GWTLEEDDESAEPTS--ILAVVR-TDDPPQELSIIRR 557 (1054)
T ss_pred chHHHHHHHhCCeeEEE----CC--EEecCHHHHHHHHhC---CCEEECCCCcccccc--ccccee-ccCCCceEEEEEE
Confidence 22345567789976432 11 467999999999875 222111000000000 000000 0011246889999
Q ss_pred ecCCCCCceEEEEEeeC--CeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhc
Q 003909 487 LEFSRDRKMMSVLCSHK--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALK 564 (787)
Q Consensus 487 ~~f~~~~~~~sviv~~~--~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~ 564 (787)
+||+|++|||||+++.+ +++++|+||+||.|+++|++.. .++.+.+.+++|+. +|+||+++|||
T Consensus 558 ~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~-------------~p~~~~~~~~~~a~-~G~RVLalA~k 623 (1054)
T TIGR01657 558 FQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET-------------VPSDYQEVLKSYTR-EGYRVLALAYK 623 (1054)
T ss_pred EeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcC-------------CChhHHHHHHHHHh-cCCEEEEEEEe
Confidence 99999999999999874 4578999999999999997411 12456677888988 99999999999
Q ss_pred cCCcccc----CCC-CCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc--
Q 003909 565 QMPINRQ----TLS-YDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD-- 637 (787)
Q Consensus 565 ~~~~~~~----~~~-~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~-- 637 (787)
+++.... ... .+.|+|++|+|+++|+|++||+++++|++|+++||+++|+|||++.+|.++|+++||......
T Consensus 624 ~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi 703 (1054)
T TIGR01657 624 ELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLI 703 (1054)
T ss_pred ecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEE
Confidence 9863210 111 122789999999999999999999999999999999999999999999999999999643210
Q ss_pred -------------------c----------------------------ccccccchhhcc---CChHHHHHhhccceEEE
Q 003909 638 -------------------F----------------------------VGRSYTASEFEE---LPAMQQTVALQHMALFT 667 (787)
Q Consensus 638 -------------------~----------------------------~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~ 667 (787)
. ...+++|++++. ..++++...+.+..|||
T Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfA 783 (1054)
T TIGR01657 704 LAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFA 783 (1054)
T ss_pred EeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEE
Confidence 0 013445555543 23345666777889999
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHH
Q 003909 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNT 747 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i 747 (787)
|++|+||.++|+.+|+.|+.|+|+|||.||++|||+|||||||+++. +..+||+++.++++.+|.++|++||+++.++
T Consensus 784 R~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~d--as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~ 861 (1054)
T TIGR01657 784 RMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEAE--ASVAAPFTSKLASISCVPNVIREGRCALVTS 861 (1054)
T ss_pred ecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeecccc--ceeecccccCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998652 4578999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 748 KQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 748 ~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
+++++|.+.+++..++..++..+ .+.|++++|+||+|+
T Consensus 862 ~~~~~~~~~~~~~~~~~~~~l~~--~~~~l~~~Q~l~i~l 899 (1054)
T TIGR01657 862 FQMFKYMALYSLIQFYSVSILYL--IGSNLGDGQFLTIDL 899 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--ccCcCccHHHHHHHH
Confidence 99999999999887666654444 447799999999985
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-97 Score=791.27 Aligned_cols=729 Identities=33% Similarity=0.496 Sum_probs=624.4
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCC-
Q 003909 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGE- 81 (787)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 81 (787)
++|.+|++|+.+++++|..+|||.++|.+++++.|||.+++|+..+=|..|.+|++..+.++++++++++++.+.+...
T Consensus 38 ~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~ 117 (1019)
T KOG0203|consen 38 DDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAST 117 (1019)
T ss_pred ccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccc
Confidence 4799999999999999999999999999999999999999999988899999999999999999999999877766422
Q ss_pred ---CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCcccc
Q 003909 82 ---TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPA 158 (787)
Q Consensus 82 ---~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPa 158 (787)
.+....+.++++..++++......+++.+..+.++.+.++.|..+.|+|||+...+..++||+||++.++-|++|||
T Consensus 118 ~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPA 197 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPA 197 (1019)
T ss_pred CCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccc
Confidence 12334445566666777777888999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhcc
Q 003909 159 DMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (787)
Q Consensus 159 D~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~ 238 (787)
|.++++ +..++||+|++||||.|..+.+.... ..+..+.|+-|.+|.+++|.+.++|++||.+|.+|++......
T Consensus 198 DiRiis--~~g~~vdnsslTGesEP~~~~~~~t~---~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~ 272 (1019)
T KOG0203|consen 198 DIRIIS--ATGCKVDNSSLTGESEPQTRSPEFTH---ENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASG 272 (1019)
T ss_pred eeEEEE--ecceeEeccccccccCCccCCccccc---cCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhcc
Confidence 999997 67799999999999999998775443 3337789999999999999999999999999999999998888
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 003909 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (787)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 318 (787)
.+..++|+++.+++|..++..+++++.+.+|++..... ..+...+.+.+.++++.+|.+|+..++..+..-
T Consensus 273 ~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~g---------y~~l~avv~~i~iivAnvPeGL~~tvTv~Ltlt 343 (1019)
T KOG0203|consen 273 LEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILG---------YEWLRAVVFLIGIIVANVPEGLLATVTVCLTLT 343 (1019)
T ss_pred CCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhc---------chhHHHhhhhheeEEecCcCCccceehhhHHHH
Confidence 88899999999999999988888887777776654332 134455666888999999999999999999999
Q ss_pred HHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccc
Q 003909 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (787)
Q Consensus 319 ~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (787)
.+||+++++++|+.++.|.||..+++|.|||||||+|+|.|.+++..+...... .. . +....
T Consensus 344 akrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d------~~---~---------~~~~~ 405 (1019)
T KOG0203|consen 344 AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEAD------TT---E---------DQSGQ 405 (1019)
T ss_pred HHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeee------ch---h---------hhhcc
Confidence 999999999999999999999999999999999999999999999765433211 00 0 00011
Q ss_pred cCCCChhHHHHHHHHhhhcccccccccCCC---CCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCc
Q 003909 399 EFPAQLPCLLHIARCSALCNESVLQYNPDK---GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (787)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (787)
......+.+..+..|+.+||.+.+.....+ ......|++.|.||++|++-.--.. .
T Consensus 406 ~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~---------------------~ 464 (1019)
T KOG0203|consen 406 SFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV---------------------M 464 (1019)
T ss_pred cccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH---------------------H
Confidence 112235667788999999999876532221 1234568999999999987432110 0
Q ss_pred cccccccEeEeecCCCCCceEEEEEeeC----CeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhh
Q 003909 476 HWEIEFKKVSILEFSRDRKMMSVLCSHK----QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLA 551 (787)
Q Consensus 476 ~~~~~~~~l~~~~f~~~~~~~sviv~~~----~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (787)
....++.++..+||+|.+|..-.+-..+ .+..+.+||+||.++++|+.+..+ |...|++++.++.+.....+++
T Consensus 465 ~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~--g~e~pld~~~~~~f~~ay~~lg 542 (1019)
T KOG0203|consen 465 ELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILIN--GEEKPLDEKLKEAFQEAYLELG 542 (1019)
T ss_pred HHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeec--CCCCCcCHHHHHHHHHHHHHhh
Confidence 1234567788999999999876655433 367788999999999999998886 7788999999999999999999
Q ss_pred ccccchhhhhhhccCCccccCCCCCC--------CCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHH
Q 003909 552 GKEALRCLALALKQMPINRQTLSYDD--------EKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE 623 (787)
Q Consensus 552 ~~~g~~~l~~a~~~~~~~~~~~~~~~--------e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~ 623 (787)
+ .|.||++|+++.++.++....+.. -.++.|+|++++-||+|+.+++|+.+||.+||+|+|+|||++.+|+
T Consensus 543 ~-~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAk 621 (1019)
T KOG0203|consen 543 G-LGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAK 621 (1019)
T ss_pred h-cchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhh
Confidence 8 999999999999986543322211 4689999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCccc--------------------cccccccchhhccCChHHHHHhhcc--ceEEEecChhhHHHHHHHH
Q 003909 624 SICHKIGAFDHLVD--------------------FVGRSYTASEFEELPAMQQTVALQH--MALFTRVEPSHKRMLVEAL 681 (787)
Q Consensus 624 ~~a~~~gi~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~p~~K~~~v~~l 681 (787)
++|++.||...... ....+++|.++..+..++..+.+.+ ..||||.+|+||..+|+.+
T Consensus 622 AiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~c 701 (1019)
T KOG0203|consen 622 AIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGC 701 (1019)
T ss_pred hhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhh
Confidence 99999997653321 1234678899999999999888873 4799999999999999999
Q ss_pred hhCCCEEEEEcCCccCHHHHhhCCceEecC-CccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 682 QNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760 (787)
Q Consensus 682 ~~~~~~v~~vGDg~ND~~ml~~A~vgia~~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~ 760 (787)
|+.|..|+++|||.||.||||.|||||||| .|++.+|++||+|++|+++.+|+..+++||.+++|+||.+.|.++.|+.
T Consensus 702 Qr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNip 781 (1019)
T KOG0203|consen 702 QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP 781 (1019)
T ss_pred hhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcch
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 761 EVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
.+.+++++.++|+|.|+.++++|.++|
T Consensus 782 EI~PfL~fi~~giPLplgtitIL~IDL 808 (1019)
T KOG0203|consen 782 EITPFLLFILFGIPLPLGTVTILCIDL 808 (1019)
T ss_pred hHhHHHHHHHhCCCcccchhhhhhhHh
Confidence 999999999999999999999999876
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-89 Score=818.88 Aligned_cols=721 Identities=22% Similarity=0.251 Sum_probs=538.2
Q ss_pred cCCCCCCCCcCccH---HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 36 YGKNVLPQEKRTAF---WKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAE 112 (787)
Q Consensus 36 ~g~N~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~ 112 (787)
|.+|.+.+.|++.| ++.+++||+++.+++++++++++++..+.. . +... ..++++++++++...+.+.+++..
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~-~-~~~t--~~~pL~~v~~~~~~~~~~ed~~r~ 76 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSP-T-YRGT--SIVPLAFVLIVTAIKEAIEDIRRR 76 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCC-C-CccH--hHHhHHHHHHHHHHHHHHHHHHHH
Confidence 57899999888765 799999999999999999999988764432 1 1122 223333444455555556666555
Q ss_pred HHHHHHHhcCCCeeEEEeC-CeEEEeecCCCCCCcEEEecCCCccccceeeeeecC--CceEEecccccCCccccccccc
Q 003909 113 KALEELRAYQADIATVLRN-GCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLS--NQLRVDQAILTGESCSVEKELD 189 (787)
Q Consensus 113 ~~~~~l~~~~~~~~~v~r~-g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~--g~~~vdes~ltGEs~pv~k~~~ 189 (787)
++-+. .+...++|+|+ |++++++|++|+|||+|.|++||+||||++++++++ |.|+||||+||||+.|+.|.+.
T Consensus 77 ~~d~~---~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 77 RRDKE---VNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HhHHH---HhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 54443 34568999997 899999999999999999999999999999997554 7899999999999999999764
Q ss_pred cccc-------------------c----------------ccCCCCCCceEeeccEEec-ceEEEEEEEecchhhhhHHH
Q 003909 190 SIIA-------------------T----------------NAVYQDKTNILFSGTVVVA-GRARAVVVGVGANTAMGSIR 233 (787)
Q Consensus 190 ~~~~-------------------~----------------~~~~~~~~~~l~~Gt~v~~-g~~~~~V~~tg~~T~~~~i~ 233 (787)
.... + ...+.+.+|++++||.+.+ |+++|+|++||.+|.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~-- 231 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMR-- 231 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhh--
Confidence 3210 0 1124456799999999998 999999999999997755
Q ss_pred HHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----CCC-------CcchhhHHHHHHHHHHHHHHh
Q 003909 234 DSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD----PSH-------GGFLRGAIHYFKIAVALAVAA 302 (787)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------~~~~~~~~~~~~~~i~~l~~~ 302 (787)
+....+.+++++++.++++..+++.+.+++|++++++...+... .|+ ..+...++..|..++.++..+
T Consensus 232 -n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~ 310 (1057)
T TIGR01652 232 -NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSL 310 (1057)
T ss_pred -cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhh
Confidence 34455667899999999999888888888887777765433211 111 011123444667788889999
Q ss_pred cCCchHHHHHHHHHHHH------HHhhhc----cccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCc
Q 003909 303 IPEGLPAVVTTCLALGT------KRMARL----NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGP 372 (787)
Q Consensus 303 ~P~~l~~~~~~~~~~~~------~~l~~~----~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~ 372 (787)
+|.+|++.++++...+. .+|.++ ++.+|+.+..|+||++++||+|||||||+|+|.++++++.+..+...
T Consensus 311 IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~ 390 (1057)
T TIGR01652 311 IPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDG 390 (1057)
T ss_pred cceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCC
Confidence 99999999999999998 677764 59999999999999999999999999999999999999876544321
Q ss_pred ceeEEe--ecCcc-ccC-------CC--ccccCCC-c-cc-cCCCChhHHHHHHHHhhhcccccccccCCC--CCceecc
Q 003909 373 IIAEYG--VTGTT-YAP-------EG--VVFDSSG-I-QL-EFPAQLPCLLHIARCSALCNESVLQYNPDK--GNYEKIG 435 (787)
Q Consensus 373 ~~~~~~--~~~~~-~~~-------~~--~~~~~~~-~-~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~ 435 (787)
...... ..... +.+ +. ..+.+.. . .. ......+.+..+..++++||++....+.+. ...+..+
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~ 470 (1057)
T TIGR01652 391 FTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAA 470 (1057)
T ss_pred cchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEcc
Confidence 000000 00000 000 00 0000000 0 00 000122346678889999998866531221 1345578
Q ss_pred ChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeC-CeeEEEEeCCh
Q 003909 436 EATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK-QMCVMFSKGAP 514 (787)
Q Consensus 436 ~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~-~~~~~~~kG~~ 514 (787)
+|+|.|++++++..|+....+++..+... .........|+++..+||+|+||||||+++++ +++++|+||+|
T Consensus 471 sp~E~ALl~~a~~~g~~~~~~~~~~~~~~-------i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~ 543 (1057)
T TIGR01652 471 SPDEAALVKAARDVGFVFFERTPKSISLL-------IEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGAD 543 (1057)
T ss_pred CCcHHHHHHHHHHCCCEEEEecCCceEEE-------EEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcH
Confidence 99999999999999987654433211110 00111235789999999999999999999975 46889999999
Q ss_pred HHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccCC---------------------
Q 003909 515 ESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTL--------------------- 573 (787)
Q Consensus 515 e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~--------------------- 573 (787)
|.|+++|... ++..++.+.+.+++|+. +|+||+++|+|.++.++...
T Consensus 544 e~il~~~~~~-----------~~~~~~~~~~~~~~~a~-~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~ 611 (1057)
T TIGR01652 544 TVIFKRLSSG-----------GNQVNEETKEHLENYAS-EGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDV 611 (1057)
T ss_pred HHHHHHhhcc-----------chhHHHHHHHHHHHHHH-cCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 9999999631 23456678888999998 99999999999987532100
Q ss_pred -CCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccc--------------
Q 003909 574 -SYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF-------------- 638 (787)
Q Consensus 574 -~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~-------------- 638 (787)
..+.|+|++|+|+++++|++|++++++|+.|+++||++||+|||+.++|..+|+++|+.......
T Consensus 612 ~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~ 691 (1057)
T TIGR01652 612 VAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSV 691 (1057)
T ss_pred HHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHH
Confidence 01127899999999999999999999999999999999999999999999999999997643210
Q ss_pred -----------------------ccccccchhhccCChHH----HHHhhc--cceEEEecChhhHHHHHHHHhhC-CCEE
Q 003909 639 -----------------------VGRSYTASEFEELPAMQ----QTVALQ--HMALFTRVEPSHKRMLVEALQNQ-NEVV 688 (787)
Q Consensus 639 -----------------------~~~~~~~~~~~~~~~~~----~~~~~~--~~~v~~~~~p~~K~~~v~~l~~~-~~~v 688 (787)
...+++|+.++.+.+.+ +..... +..||||++|+||.++|+.+|+. |+.|
T Consensus 692 ~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~v 771 (1057)
T TIGR01652 692 EAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTT 771 (1057)
T ss_pred HHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeE
Confidence 01245565554333222 222222 34599999999999999999998 9999
Q ss_pred EEEcCCccCHHHHhhCCceEecC-CccHHHHhhcCeeccCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 689 AMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAV-AEGRAIYNNTKQFIRYMISSNIGEVVCIF 766 (787)
Q Consensus 689 ~~vGDg~ND~~ml~~A~vgia~~-~~~~~~~~~ad~v~~~~~~~~i~~~i-~~gR~~~~~i~~~~~~~l~~n~~~~~~~~ 766 (787)
+|+|||.||++||++|||||++. ....+++.+||+++.+ +..+..++ .|||+++.|+++.+.|.++.|+...++.+
T Consensus 772 l~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~ 849 (1057)
T TIGR01652 772 LAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQF 849 (1057)
T ss_pred EEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999984 3334789999999975 88999887 89999999999999999999999999888
Q ss_pred HHHHhcCC---CchhHhhhheecC
Q 003909 767 VAAVLGIP---DTLAPVSLISVNI 787 (787)
Q Consensus 767 ~~~~~~~~---~~l~~~~~l~~~l 787 (787)
++.++..+ +++.+++++|.|+
T Consensus 850 ~~~~~~~~s~~~~~~~~~l~~~n~ 873 (1057)
T TIGR01652 850 WYSFYNGFSGQTLYEGWYMVLYNV 873 (1057)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHH
Confidence 88777544 4688889999884
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-85 Score=732.30 Aligned_cols=561 Identities=23% Similarity=0.324 Sum_probs=449.3
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHhhcC---CCCcccchhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhcCCC-ee
Q 003909 55 KQFDDLLVKILIAAAVISFFLALING---ETGLTAFLEPSVILLILAANAAVGVIT----ETNAEKALEELRAYQAD-IA 126 (787)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~il~~~~~~~~l~~~~----~~~~~~~~~~l~~~~~~-~~ 126 (787)
.+|+++..++++++++++++++.+.. ..++ ..++++.++++++++.+++.++ ++|+++.++.|++..++ ++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESV-SRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 35678999999999999998877632 1111 1133444555555555555544 78999999999998876 67
Q ss_pred E-EEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceE
Q 003909 127 T-VLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNIL 205 (787)
Q Consensus 127 ~-v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l 205 (787)
+ |.|||++++|++++|+|||+|.+++||+|||||++++ |...||||+|||||.|+.|.++. + .+.+
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~---------d-~~~V 173 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK---GLATVDESAITGESAPVIKESGG---------D-FDNV 173 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEE---cceEEecchhcCCCCceeccCCC---------c-cCee
Confidence 5 7799999999999999999999999999999999996 56799999999999999998751 1 1349
Q ss_pred eeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcch
Q 003909 206 FSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFL 285 (787)
Q Consensus 206 ~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (787)
|+||.+.+|++.++|+++|.+|.+|++.+++..++++++|++.....+...++ ++++++++++..+..+.
T Consensus 174 ~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~--ii~l~~~~~~~~~~~~~-------- 243 (673)
T PRK14010 174 IGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLT--IIFLVVILTMYPLAKFL-------- 243 (673)
T ss_pred ecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHh--HHHHHHHHHHHHHHhhc--------
Confidence 99999999999999999999999999999999998899999876554433222 22222222221111110
Q ss_pred hhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEe
Q 003909 286 RGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVV 365 (787)
Q Consensus 286 ~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~ 365 (787)
.+...+.+.++++++++||+|+..++++...++.+++|+|+++|+.+++|.+|++|++|||||||||+|++.+.++...
T Consensus 244 -~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~ 322 (673)
T PRK14010 244 -NFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPV 322 (673)
T ss_pred -cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeC
Confidence 1123456677788888999999999999999999999999999999999999999999999999999988887775432
Q ss_pred cccccCcceeEEeecCccccCCCccccCCCccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHH
Q 003909 366 HSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVL 445 (787)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 445 (787)
++ ....++.....+|+.. ..||.+.|++++
T Consensus 323 ~~-------------------------------------~~~~~ll~~a~~~~~~-------------s~~P~~~AIv~~ 352 (673)
T PRK14010 323 KS-------------------------------------SSFERLVKAAYESSIA-------------DDTPEGRSIVKL 352 (673)
T ss_pred CC-------------------------------------ccHHHHHHHHHHhcCC-------------CCChHHHHHHHH
Confidence 11 0112233444456532 138999999999
Q ss_pred HHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhccccc
Q 003909 446 AEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNIL 525 (787)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~ 525 (787)
+++.++... ......+||++++|+|++.++ ++ .+.||+++.+++.|+.
T Consensus 353 a~~~~~~~~--------------------------~~~~~~~pF~~~~k~~gv~~~--g~--~i~kGa~~~il~~~~~-- 400 (673)
T PRK14010 353 AYKQHIDLP--------------------------QEVGEYIPFTAETRMSGVKFT--TR--EVYKGAPNSMVKRVKE-- 400 (673)
T ss_pred HHHcCCCch--------------------------hhhcceeccccccceeEEEEC--CE--EEEECCHHHHHHHhhh--
Confidence 987654320 001124799999999998753 32 4569999999999974
Q ss_pred ccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHH
Q 003909 526 CNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCM 605 (787)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~ 605 (787)
+|...+. .+.+..++++. +|+|+++++ .|++++|+++++|++||+++++|++||
T Consensus 401 ---~g~~~~~------~~~~~~~~~a~-~G~~~l~v~----------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr 454 (673)
T PRK14010 401 ---AGGHIPV------DLDALVKGVSK-KGGTPLVVL----------------EDNEILGVIYLKDVIKDGLVERFRELR 454 (673)
T ss_pred ---cCCCCch------HHHHHHHHHHh-CCCeEEEEE----------------ECCEEEEEEEeecCCcHHHHHHHHHHH
Confidence 1211111 24445566776 899988765 377899999999999999999999999
Q ss_pred hCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCC
Q 003909 606 TAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQN 685 (787)
Q Consensus 606 ~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~ 685 (787)
++|++++|+|||++.+|.++|+++|++. +|+|++|+||.++|+.+|++|
T Consensus 455 ~~GI~vvMiTGDn~~TA~aIA~elGI~~-------------------------------v~A~~~PedK~~iV~~lQ~~G 503 (673)
T PRK14010 455 EMGIETVMCTGDNELTAATIAKEAGVDR-------------------------------FVAECKPEDKINVIREEQAKG 503 (673)
T ss_pred HCCCeEEEECCCCHHHHHHHHHHcCCce-------------------------------EEcCCCHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999976 899999999999999999999
Q ss_pred CEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 686 EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCI 765 (787)
Q Consensus 686 ~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~ 765 (787)
+.|+|+|||.||+|+|++||||||||+|++.+|++||+|+.++|+..+.+++++||+++.|+++++.|.++.|+...+.+
T Consensus 504 ~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i 583 (673)
T PRK14010 504 HIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAI 583 (673)
T ss_pred CEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHhcCCCchhH
Q 003909 766 FVAAVLGIPDTLAP 779 (787)
Q Consensus 766 ~~~~~~~~~~~l~~ 779 (787)
+.+.|....+.+..
T Consensus 584 ~~a~~~~~~~~~~~ 597 (673)
T PRK14010 584 LPAMFMAAMPAMNH 597 (673)
T ss_pred HHHHHHHhcccchh
Confidence 88777655444443
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-86 Score=714.25 Aligned_cols=707 Identities=24% Similarity=0.329 Sum_probs=521.5
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHH
Q 003909 21 TKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAAN 100 (787)
Q Consensus 21 ~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~ 100 (787)
.+||+.+++.+|+..||+|.+..+. ++++.++.++.-+++..+.. +++++|... .+++.+.+|+++..++
T Consensus 158 ~~gL~~~~~~~r~~iyG~N~i~l~i-k~i~~iLv~EvL~PfYlFQ~----fSv~lW~~d-----~Y~~YA~cI~iisv~S 227 (1140)
T KOG0208|consen 158 SNGLERQEIIDRRIIYGRNVISLPI-KSISQILVKEVLNPFYLFQA----FSVALWLAD-----SYYYYAFCIVIISVYS 227 (1140)
T ss_pred cCCccHHHHHhHHhhcCCceeeeec-ccHHHHHHHhccchHHHHHh----HHhhhhhcc-----cchhhhhHHHHHHHHH
Confidence 7899999999999999999999865 47899999988888776554 444444332 4556678888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecC-CCccccceeeeeecCCceEEecccccC
Q 003909 101 AAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNV-GCKIPADMRMIEMLSNQLRVDQAILTG 179 (787)
Q Consensus 101 ~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~-G~~vPaD~~il~~~~g~~~vdes~ltG 179 (787)
..+..+..++..+.++++-+.. ..|+|+|+|.|++|.++|||||||+.+.+ |-..|||++++ +|+|.||||+|||
T Consensus 228 i~~sv~e~r~qs~rlr~mv~~~-~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li---~g~civNEsmLTG 303 (1140)
T KOG0208|consen 228 IVLSVYETRKQSIRLRSMVKFT-CPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLI---SGDCIVNESMLTG 303 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC-ceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEE---eCcEEeecccccC
Confidence 9999999888888888876543 46899999999999999999999999988 99999999999 5999999999999
Q ss_pred Cccccccccccccc------cccCCCCCCceEeeccEEec------ceEEEEEEEecchhhhhHHHHHhccCCCCCCchH
Q 003909 180 ESCSVEKELDSIIA------TNAVYQDKTNILFSGTVVVA------GRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLK 247 (787)
Q Consensus 180 Es~pv~k~~~~~~~------~~~~~~~~~~~l~~Gt~v~~------g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~ 247 (787)
||.|+.|.+.+... ......+.+|++|+||.+++ +.+.++|++||.+|..|++.+++..++....++.
T Consensus 304 ESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfy 383 (1140)
T KOG0208|consen 304 ESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFY 383 (1140)
T ss_pred CcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHH
Confidence 99999999865211 12334467899999999985 7899999999999999999999999754444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccc
Q 003909 248 KKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNA 327 (787)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i 327 (787)
+... .++..+.+++++.+++....... .+ ...-..++.++.++...+|+|||.++++....+..||.|+||
T Consensus 384 rds~----~fi~~l~~ia~~gfiy~~i~l~~---~g--~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~I 454 (1140)
T KOG0208|consen 384 RDSF----KFILFLVIIALIGFIYTAIVLNL---LG--VPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGI 454 (1140)
T ss_pred HHHH----HHHHHHHHHHHHHHHHHhHhHHH---cC--CCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCe
Confidence 3333 33333444444444443322210 00 112345778899999999999999999999999999999999
Q ss_pred cccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccc-cCcceeEEeecCccccCCCccccCCCccccCCCChhH
Q 003909 328 IVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQ-QGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPC 406 (787)
Q Consensus 328 ~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (787)
+|-+++++...|++|++|||||||||++.+.+-++....+.. .++..... ......... ++........
T Consensus 455 fCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~------~~~~~~~~~----~l~~~~~~~~ 524 (1140)
T KOG0208|consen 455 FCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVV------TEDSLQLFY----KLSLRSSSLP 524 (1140)
T ss_pred EEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhh------hhhhcccee----eccccccCCc
Confidence 999999999999999999999999999999999988754321 11100000 000000000 0000001111
Q ss_pred HHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCC--ch---hh-----hhhhhhhcc-ccccCc
Q 003909 407 LLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDS--MP---SA-----LNMLSKHER-ASYCNH 475 (787)
Q Consensus 407 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~--~~---~~-----~~~~~~~~~-~~~~~~ 475 (787)
...+..+.+-||.-... .....|||.|..+.+. .|+...+. .+ .. ...+.+... .....+
T Consensus 525 ~~~~~~a~atCHSL~~v------~g~l~GDPLdlkmfe~---t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~ 595 (1140)
T KOG0208|consen 525 MGNLVAAMATCHSLTLV------DGTLVGDPLDLKMFES---TGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTE 595 (1140)
T ss_pred hHHHHHHHhhhceeEEe------CCeeccCceeeeeeec---cceEEEeccccchhhhhhCCccCCEeCCCcccccCCCc
Confidence 23456666777743321 1233467776655533 33333211 00 00 001111110 001111
Q ss_pred cccccccEeEeecCCCCCceEEEEEeeC--CeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhcc
Q 003909 476 HWEIEFKKVSILEFSRDRKMMSVLCSHK--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGK 553 (787)
Q Consensus 476 ~~~~~~~~l~~~~f~~~~~~~sviv~~~--~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (787)
.....+.+++.+||+|..+||||||+.+ .+..+|+||+||.|.+.|++... | ..+++.++.|+.
T Consensus 596 ~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tv-------P------~dy~evl~~Yt~- 661 (1140)
T KOG0208|consen 596 CGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETV-------P------ADYQEVLKEYTH- 661 (1140)
T ss_pred CCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccC-------C------ccHHHHHHHHHh-
Confidence 1223688999999999999999999987 56789999999999999976332 2 337788899998
Q ss_pred ccchhhhhhhccCCccc----cCCCCCC-CCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH
Q 003909 554 EALRCLALALKQMPINR----QTLSYDD-EKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK 628 (787)
Q Consensus 554 ~g~~~l~~a~~~~~~~~----~~~~~~~-e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~ 628 (787)
+|+|++|+|+|+++... +....+. |+|++|+|++.|+++++++++.+|++|+++.|+.+|+|||+..||..+|++
T Consensus 662 ~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVake 741 (1140)
T KOG0208|consen 662 QGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKE 741 (1140)
T ss_pred CCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhc
Confidence 99999999999998651 1122222 899999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCcccc---------------------c------------------------------cccccchhhccCC---hH
Q 003909 629 IGAFDHLVDF---------------------V------------------------------GRSYTASEFEELP---AM 654 (787)
Q Consensus 629 ~gi~~~~~~~---------------------~------------------------------~~~~~~~~~~~~~---~~ 654 (787)
||+..+.... + ...++|+.+.-+. .+
T Consensus 742 Cgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~ 821 (1140)
T KOG0208|consen 742 CGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPE 821 (1140)
T ss_pred ccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHH
Confidence 9998654210 0 0112222222221 22
Q ss_pred HHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHH
Q 003909 655 QQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIV 734 (787)
Q Consensus 655 ~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~ 734 (787)
.+...+.+..|||||+|.||.++++.+|+.|..|+|+|||+||+.|||+||+||+++.+ +|.-+|.++....+...|.
T Consensus 822 l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea--EASvAApFTSk~~~I~cVp 899 (1140)
T KOG0208|consen 822 LVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEA--EASVAAPFTSKTPSISCVP 899 (1140)
T ss_pred HHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhh--hHhhcCccccCCCchhhHh
Confidence 33445557789999999999999999999999999999999999999999999999743 5566899999988999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 735 AAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 735 ~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
++|++||+.+..-...++|+..|.+..++..+ .++..-.-++-.|.|+++|
T Consensus 900 ~vIrEGRaALVTSf~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDL 950 (1140)
T KOG0208|consen 900 DVIREGRAALVTSFACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDL 950 (1140)
T ss_pred HHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHH
Confidence 99999999999999999999999965554433 2333345677778877764
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-85 Score=772.15 Aligned_cols=714 Identities=21% Similarity=0.220 Sum_probs=526.0
Q ss_pred hcCCCCCCCCcCcc---HHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 003909 35 IYGKNVLPQEKRTA---FWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNA 111 (787)
Q Consensus 35 ~~g~N~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~ 111 (787)
.|..|.+.+.|++- +++++++||+++.++++++++++.++..+.. ......+++.++++++..+..+++.+.++++
T Consensus 86 ~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~-~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~ 164 (1178)
T PLN03190 86 EFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAV-FGRGASILPLAFVLLVTAVKDAYEDWRRHRS 164 (1178)
T ss_pred cCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCccc-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 47889998888753 5788999999999999999999987665432 1122334444444444445555555555555
Q ss_pred HHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeeecC--CceEEecccccCCccccccccc
Q 003909 112 EKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLS--NQLRVDQAILTGESCSVEKELD 189 (787)
Q Consensus 112 ~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~--g~~~vdes~ltGEs~pv~k~~~ 189 (787)
++.. ++..++|+|+|.+++++|++|+|||+|+|++||++|||++++++++ |.|+|||++||||+.|+.|.++
T Consensus 165 d~~~------N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~ 238 (1178)
T PLN03190 165 DRIE------NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAK 238 (1178)
T ss_pred HHhh------cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEeccc
Confidence 4432 4567899999999999999999999999999999999999997543 8899999999999999999765
Q ss_pred cccc--------------------------------cccCCCCCCceEeeccEEec-ceEEEEEEEecchhhhhHHHHHh
Q 003909 190 SIIA--------------------------------TNAVYQDKTNILFSGTVVVA-GRARAVVVGVGANTAMGSIRDSM 236 (787)
Q Consensus 190 ~~~~--------------------------------~~~~~~~~~~~l~~Gt~v~~-g~~~~~V~~tg~~T~~~~i~~~~ 236 (787)
+... ......+.+|++++|+.+.+ .+++|+|++||++|.+ +.+.
T Consensus 239 ~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~---~~N~ 315 (1178)
T PLN03190 239 QETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKA---MLNN 315 (1178)
T ss_pred chhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhH---hhcC
Confidence 3211 01123456789999999986 5899999999999963 3333
Q ss_pred ccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----CCCCCcch-------------------hhHHHHHH
Q 003909 237 LQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFR----DPSHGGFL-------------------RGAIHYFK 293 (787)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-------------------~~~~~~~~ 293 (787)
..+..+.+++++.++++..++..+.+++|+++.++...+.. ..++..|. ...+..|.
T Consensus 316 ~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 395 (1178)
T PLN03190 316 SGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFL 395 (1178)
T ss_pred CCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHH
Confidence 34456789999999999988888888887777655432211 00000000 01123344
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHHhhhcc----------ccccccccccccCCeeEEEeCCCCccccCceEEEEEE
Q 003909 294 IAVALAVAAIPEGLPAVVTTCLALGTKRMARLN----------AIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKIC 363 (787)
Q Consensus 294 ~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~----------i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~ 363 (787)
.++.++..++|.+|++.++++...+..++.++. +.+|+.+..|+||+|++||+|||||||+|.|.++++.
T Consensus 396 ~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~ 475 (1178)
T PLN03190 396 MSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCAS 475 (1178)
T ss_pred HHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEE
Confidence 456677789999999999999988888886644 6799999999999999999999999999999999999
Q ss_pred EecccccCcceeE------E--eecCccccCCCccccCCC-----ccccCCCChhHHHHHHHHhhhcccccccccCC--C
Q 003909 364 VVHSVQQGPIIAE------Y--GVTGTTYAPEGVVFDSSG-----IQLEFPAQLPCLLHIARCSALCNESVLQYNPD--K 428 (787)
Q Consensus 364 ~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~ 428 (787)
+.+..+....... . ...+..+.+......+.. ...........+..+..++++||++.+....+ .
T Consensus 476 i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~ 555 (1178)
T PLN03190 476 IWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSD 555 (1178)
T ss_pred ECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCC
Confidence 8765443211000 0 011111111110000000 00000011234667889999999986532111 1
Q ss_pred ----CCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeC-
Q 003909 429 ----GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK- 503 (787)
Q Consensus 429 ----~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~- 503 (787)
...+..++|+|.||+.+|++.|+.+..+++.++..... .....|+++..+||+|+||||||+++.+
T Consensus 556 ~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~---------~~~~~~~il~~~pF~S~rKrMSvIv~~~~ 626 (1178)
T PLN03190 556 PTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIH---------GERQRFNVLGLHEFDSDRKRMSVILGCPD 626 (1178)
T ss_pred ccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeec---------cceecceeEEEecccccccEEEEEEEcCC
Confidence 12356679999999999999999887776655433211 2345789999999999999999999874
Q ss_pred CeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccC-----------
Q 003909 504 QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQT----------- 572 (787)
Q Consensus 504 ~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~----------- 572 (787)
++..+|+||+||.|+++|+... ++..++.+.+.+++|+. +|+||+++|||.++.++..
T Consensus 627 ~~~~l~~KGA~e~il~~~~~~~----------~~~~~~~~~~~l~~~a~-~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~ 695 (1178)
T PLN03190 627 KTVKVFVKGADTSMFSVIDRSL----------NMNVIRATEAHLHTYSS-LGLRTLVVGMRELNDSEFEQWHFSFEAAST 695 (1178)
T ss_pred CcEEEEEecCcHHHHHhhcccc----------cchhHHHHHHHHHHHHh-cCCceEEEEEEeCCHHHHhhHHHHHHHhhh
Confidence 5688999999999999996532 12345667888999998 9999999999998743211
Q ss_pred -----------CCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccc---
Q 003909 573 -----------LSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF--- 638 (787)
Q Consensus 573 -----------~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~--- 638 (787)
...+.|+|++++|+++++|++|++++++|++|+++|++++|+|||+.++|..+|+++|+.......
T Consensus 696 ~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i 775 (1178)
T PLN03190 696 ALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIII 775 (1178)
T ss_pred hhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEe
Confidence 001237999999999999999999999999999999999999999999999999999997543110
Q ss_pred ------------------------------------------ccccccchhhccCCh----HHHHHhhc--cceEEEecC
Q 003909 639 ------------------------------------------VGRSYTASEFEELPA----MQQTVALQ--HMALFTRVE 670 (787)
Q Consensus 639 ------------------------------------------~~~~~~~~~~~~~~~----~~~~~~~~--~~~v~~~~~ 670 (787)
...+++|..+..+.+ +.+..... ...||||++
T Consensus 776 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~s 855 (1178)
T PLN03190 776 NSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVA 855 (1178)
T ss_pred cCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCC
Confidence 012344544444432 12223332 345899999
Q ss_pred hhhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceEecC-CccHHHHhhcCeeccCCCchHHHHHH-HHHHHHHHHH
Q 003909 671 PSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAV-AEGRAIYNNT 747 (787)
Q Consensus 671 p~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A~vgia~~-~~~~~~~~~ad~v~~~~~~~~i~~~i-~~gR~~~~~i 747 (787)
|.||+++|+.+|+. ++.|+|+|||.||++||++|||||++. ....+|+.+||+.+.. +..+.+++ -|||+.|.|+
T Consensus 856 P~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~ 933 (1178)
T PLN03190 856 PLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRM 933 (1178)
T ss_pred HHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHH
Confidence 99999999999987 578999999999999999999999863 5555899999999987 55566665 5999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHh
Q 003909 748 KQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 780 (787)
Q Consensus 748 ~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~ 780 (787)
.+.+.|.++.|++..+++|++.++..+++.+..
T Consensus 934 s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly 966 (1178)
T PLN03190 934 GYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAI 966 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 999999999999999999998888877665433
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-84 Score=720.46 Aligned_cols=559 Identities=24% Similarity=0.304 Sum_probs=456.4
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHhhcCC-----CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-eeEE
Q 003909 55 KQFDDLLVKILIAAAVISFFLALINGE-----TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQAD-IATV 128 (787)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~v 128 (787)
.||+++..++++++++++++++++... .....|...+.+++.++++.+++.++++|+++.++.|++..++ .++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 567899999999999999988765311 1123444556666667778888889999999999999998876 6999
Q ss_pred EeCCe-EEEeecCCCCCCcEEEecCCCccccceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEee
Q 003909 129 LRNGC-FSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFS 207 (787)
Q Consensus 129 ~r~g~-~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~ 207 (787)
+|+|+ +++|++++|++||+|.+++||+|||||++++ |.+.||||++||||.|+.|.+++. .+.+|+
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie---G~a~VDESaLTGES~PV~K~~G~~----------~~~V~a 175 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE---GVASVDESAITGESAPVIRESGGD----------FSSVTG 175 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEE---ccEEEEcccccCCCCceEeCCCCc----------cCeEEe
Confidence 99988 9999999999999999999999999999996 568999999999999999987532 233999
Q ss_pred ccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhh
Q 003909 208 GTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRG 287 (787)
Q Consensus 208 Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (787)
||.+.+|++.++|+++|.+|.++++.+++..++++++|++...+.+...+..++++++++.+.+.. +.. . .
T Consensus 176 GT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~--~~g---~----~ 246 (679)
T PRK01122 176 GTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAA--YSG---G----A 246 (679)
T ss_pred ceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHH--HhC---c----h
Confidence 999999999999999999999999999999998999999988877766655444443333332221 110 0 1
Q ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecc
Q 003909 288 AIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHS 367 (787)
Q Consensus 288 ~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~ 367 (787)
..+.+++++++++|||+++.+.+.+...++.+++|+|+++|+.+++|.+|++|++|||||||||+|+|.+.+++..+.
T Consensus 247 --~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~ 324 (679)
T PRK01122 247 --LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG 324 (679)
T ss_pred --HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC
Confidence 256778999999999999999999999999999999999999999999999999999999999999999998764321
Q ss_pred cccCcceeEEeecCccccCCCccccCCCccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHH
Q 003909 368 VQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAE 447 (787)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 447 (787)
. .. ..+.....+|+... .||..+|++++++
T Consensus 325 ~----------------------------------~~---~~ll~~a~~~s~~s-------------~hP~~~AIv~~a~ 354 (679)
T PRK01122 325 V----------------------------------TE---EELADAAQLSSLAD-------------ETPEGRSIVVLAK 354 (679)
T ss_pred C----------------------------------CH---HHHHHHHHHhcCCC-------------CCchHHHHHHHHH
Confidence 0 01 12333444454321 3688899999987
Q ss_pred H-cCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccc
Q 003909 448 K-VGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILC 526 (787)
Q Consensus 448 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~ 526 (787)
+ .+.... ...+.....+||++.++++++.++ + ..|.||++|.+++.|..
T Consensus 355 ~~~~~~~~-----------------------~~~~~~~~~~pF~s~~~~~gv~~~--g--~~~~kGa~e~il~~~~~--- 404 (679)
T PRK01122 355 QRFNLRER-----------------------DLQSLHATFVPFSAQTRMSGVDLD--G--REIRKGAVDAIRRYVES--- 404 (679)
T ss_pred hhcCCCch-----------------------hhccccceeEeecCcCceEEEEEC--C--EEEEECCHHHHHHHHHh---
Confidence 6 232110 011344567899999998887553 3 57899999999999954
Q ss_pred cCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHh
Q 003909 527 NDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMT 606 (787)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~ 606 (787)
+|... .+.+.+..++++. +|.|++++|+ |++++|+++++|++||++++++++||+
T Consensus 405 --~g~~~------~~~~~~~~~~~a~-~G~~~l~va~----------------~~~~lG~i~l~D~~R~~~~eai~~Lr~ 459 (679)
T PRK01122 405 --NGGHF------PAELDAAVDEVAR-KGGTPLVVAE----------------DNRVLGVIYLKDIVKPGIKERFAELRK 459 (679)
T ss_pred --cCCcC------hHHHHHHHHHHHh-CCCcEEEEEE----------------CCeEEEEEEEeccCchhHHHHHHHHHH
Confidence 12211 1345566677777 9999999983 678999999999999999999999999
Q ss_pred CCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCC
Q 003909 607 AGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNE 686 (787)
Q Consensus 607 ~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~ 686 (787)
+||+++|+|||++.+|.++|+++|++. +|+|++|++|.++|+.+|+.|+
T Consensus 460 ~GI~vvMiTGDn~~TA~aIA~elGId~-------------------------------v~A~~~PedK~~iV~~lQ~~G~ 508 (679)
T PRK01122 460 MGIKTVMITGDNPLTAAAIAAEAGVDD-------------------------------FLAEATPEDKLALIRQEQAEGR 508 (679)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCcE-------------------------------EEccCCHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999976 8999999999999999999999
Q ss_pred EEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 687 VVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIF 766 (787)
Q Consensus 687 ~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~ 766 (787)
.|+|+|||.||+|+|++|||||||++|++.+|++||+|+.++|+..+.+++++||+++-.--....|++...+.-.+.++
T Consensus 509 ~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~~~~~i~ 588 (679)
T PRK01122 509 LVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAII 588 (679)
T ss_pred eEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999996666667899875555555554
Q ss_pred HHHHhcC
Q 003909 767 VAAVLGI 773 (787)
Q Consensus 767 ~~~~~~~ 773 (787)
-+.|...
T Consensus 589 p~~~~~~ 595 (679)
T PRK01122 589 PAMFAAT 595 (679)
T ss_pred HHHHHhh
Confidence 4444433
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-80 Score=692.17 Aligned_cols=567 Identities=24% Similarity=0.350 Sum_probs=459.5
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHhhcC---CCCc-ccchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCe-e
Q 003909 55 KQFDDLLVKILIAAAVISFFLALING---ETGL-TAFLEP---SVILLILAANAAVGVITETNAEKALEELRAYQADI-A 126 (787)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~---~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-~ 126 (787)
.||+++..+++++++++++++++++. ..+. ..|++. +.+++.++++.+++.++++|+++.++.|++..++. +
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 56789999999999999998876531 1011 134553 33445567788888899999999999999988764 7
Q ss_pred EEEe-CCeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceE
Q 003909 127 TVLR-NGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNIL 205 (787)
Q Consensus 127 ~v~r-~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l 205 (787)
+|+| ||++++|++++|+|||+|.+++||+|||||++++ |.+.||||++||||.|+.|.+++. .+.+
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~~----------~~~V 174 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE---GVASVDESAITGESAPVIKESGGD----------FASV 174 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE---ccEEEEcccccCCCCceeecCCCC----------ccee
Confidence 8885 8999999999999999999999999999999996 678999999999999999998632 1139
Q ss_pred eeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcch
Q 003909 206 FSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFL 285 (787)
Q Consensus 206 ~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (787)
|+||.+.+|++.++|+++|.+|.++++.+++..++++++|++..++.+..++..++++++++.+.+. .+.
T Consensus 175 ~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~--~~~-------- 244 (675)
T TIGR01497 175 TGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFA--AYG-------- 244 (675)
T ss_pred ecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhc--------
Confidence 9999999999999999999999999999999999888999998877776555444333332222211 110
Q ss_pred hhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEe
Q 003909 286 RGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVV 365 (787)
Q Consensus 286 ~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~ 365 (787)
.....+..++++++++|||+++...+.+...++.+++++|+++|+.+++|.+|++|++|||||||||+|+|.+.+++..
T Consensus 245 -~~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~ 323 (675)
T TIGR01497 245 -GNAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPA 323 (675)
T ss_pred -ChhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEec
Confidence 0112456678899999999998888888888999999999999999999999999999999999999999999988653
Q ss_pred cccccCcceeEEeecCccccCCCccccCCCccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHH
Q 003909 366 HSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVL 445 (787)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 445 (787)
+.. .. .++.....+|+.. ..||.++|++.+
T Consensus 324 ~~~----------------------------------~~---~~ll~~aa~~~~~-------------s~hP~a~Aiv~~ 353 (675)
T TIGR01497 324 QGV----------------------------------DE---KTLADAAQLASLA-------------DDTPEGKSIVIL 353 (675)
T ss_pred CCC----------------------------------cH---HHHHHHHHHhcCC-------------CCCcHHHHHHHH
Confidence 210 01 1233334444422 147899999999
Q ss_pred HHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhccccc
Q 003909 446 AEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNIL 525 (787)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~ 525 (787)
+++.|..... ..+......||+++++++++.+. ++ ..+.||++|.+++.|+.
T Consensus 354 a~~~~~~~~~-----------------------~~~~~~~~~pf~~~~~~sg~~~~-~g--~~~~kGa~e~i~~~~~~-- 405 (675)
T TIGR01497 354 AKQLGIREDD-----------------------VQSLHATFVEFTAQTRMSGINLD-NG--RMIRKGAVDAIKRHVEA-- 405 (675)
T ss_pred HHHcCCCccc-----------------------cccccceEEEEcCCCcEEEEEEe-CC--eEEEECCHHHHHHHHHh--
Confidence 9876643210 11223467899999888776543 23 57899999999998853
Q ss_pred ccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHH
Q 003909 526 CNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCM 605 (787)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~ 605 (787)
+|...+ ..+.+.+++++. +|.|++++|+ +.+++|+++++|++||+++++|++|+
T Consensus 406 ---~g~~~~------~~~~~~~~~~a~-~G~r~l~va~----------------~~~~lG~i~l~D~~Rp~a~eaI~~l~ 459 (675)
T TIGR01497 406 ---NGGHIP------TDLDQAVDQVAR-QGGTPLVVCE----------------DNRIYGVIYLKDIVKGGIKERFAQLR 459 (675)
T ss_pred ---cCCCCc------HHHHHHHHHHHh-CCCeEEEEEE----------------CCEEEEEEEecccchhHHHHHHHHHH
Confidence 122111 235566677777 9999999984 46899999999999999999999999
Q ss_pred hCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCC
Q 003909 606 TAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQN 685 (787)
Q Consensus 606 ~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~ 685 (787)
++|++++|+|||+..+|.++|+++|++. ++++++|++|.++++.+|+.|
T Consensus 460 ~~Gi~v~miTGD~~~ta~~iA~~lGI~~-------------------------------v~a~~~PedK~~~v~~lq~~g 508 (675)
T TIGR01497 460 KMGIKTIMITGDNRLTAAAIAAEAGVDD-------------------------------FIAEATPEDKIALIRQEQAEG 508 (675)
T ss_pred HCCCEEEEEcCCCHHHHHHHHHHcCCCE-------------------------------EEcCCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999976 889999999999999999999
Q ss_pred CEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 686 EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCI 765 (787)
Q Consensus 686 ~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~ 765 (787)
+.|+|+|||.||+|||++||+||||+++++.++++||+++.++|+..+.+++++||+++-+......|+++.++.-.+.+
T Consensus 509 ~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~~ 588 (675)
T TIGR01497 509 KLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAI 588 (675)
T ss_pred CeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988887777
Q ss_pred HHHHHhcCCCchhHh
Q 003909 766 FVAAVLGIPDTLAPV 780 (787)
Q Consensus 766 ~~~~~~~~~~~l~~~ 780 (787)
+-+.|....+.+...
T Consensus 589 ~~~~~~~~~~~~~~~ 603 (675)
T TIGR01497 589 IPAIFAAAYPQLQAL 603 (675)
T ss_pred HHHHHHhhCcchhhh
Confidence 666666544444433
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-80 Score=687.07 Aligned_cols=503 Identities=28% Similarity=0.394 Sum_probs=428.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEe-CCeEEEeecCCCCCCcEEEecCCCccccceeee
Q 003909 85 TAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLR-NGCFSILPAAELVPGDIVEVNVGCKIPADMRMI 163 (787)
Q Consensus 85 ~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r-~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il 163 (787)
.+|.++..+++++.++.+++.+...|++++++.|.++.|+++++++ ||++++|+.++|++||+|.|+|||+||+||+|+
T Consensus 172 ~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~ 251 (713)
T COG2217 172 VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVV 251 (713)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEE
Confidence 4556788888999999999999999999999999999999998777 455999999999999999999999999999999
Q ss_pred eecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCC
Q 003909 164 EMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEV 243 (787)
Q Consensus 164 ~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~ 243 (787)
+ |...||||++||||.|+.|.+ ++.|++||.+.+|....+|+++|.+|.++++.+++.+++.++
T Consensus 252 ~---G~s~vDeS~iTGEs~PV~k~~-------------Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~K 315 (713)
T COG2217 252 S---GSSSVDESMLTGESLPVEKKP-------------GDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSK 315 (713)
T ss_pred e---CcEEeecchhhCCCCCEecCC-------------CCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCC
Confidence 6 777899999999999999998 456999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhh
Q 003909 244 TPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMA 323 (787)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~ 323 (787)
+|.++..|+++.+++|++++++++.|++|++.... .+...+..++++|+++|||+|.+++|+++..++.+.+
T Consensus 316 a~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~--------~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA 387 (713)
T COG2217 316 APIQRLADRVASYFVPVVLVIAALTFALWPLFGGG--------DWETALYRALAVLVIACPCALGLATPTAILVGIGRAA 387 (713)
T ss_pred chHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC--------cHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHH
Confidence 99999999999999999999999988877655421 2334678899999999999999999999999999999
Q ss_pred hccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCC
Q 003909 324 RLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQ 403 (787)
Q Consensus 324 ~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (787)
++|+++|+...+|.++++|+++||||||||+|+|.|..+...+. .
T Consensus 388 ~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-~---------------------------------- 432 (713)
T COG2217 388 RRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-D---------------------------------- 432 (713)
T ss_pred hCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-C----------------------------------
Confidence 99999999999999999999999999999999999999876532 1
Q ss_pred hhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccE
Q 003909 404 LPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKK 483 (787)
Q Consensus 404 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (787)
...++.++.++. ..+.||..+|++++++..|..... .
T Consensus 433 e~~~L~laAalE----------------~~S~HPiA~AIv~~a~~~~~~~~~---------------------------~ 469 (713)
T COG2217 433 EDELLALAAALE----------------QHSEHPLAKAIVKAAAERGLPDVE---------------------------D 469 (713)
T ss_pred HHHHHHHHHHHH----------------hcCCChHHHHHHHHHHhcCCCCcc---------------------------c
Confidence 123334443322 223599999999998877632210 0
Q ss_pred eEeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhh
Q 003909 484 VSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALAL 563 (787)
Q Consensus 484 l~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~ 563 (787)
...+| .+.... .-++ ..+..|++..+.+.-.. .+. ..+..+.+.. +|..++.++
T Consensus 470 ~~~i~---G~Gv~~---~v~g--~~v~vG~~~~~~~~~~~---------~~~-------~~~~~~~~~~-~G~t~v~va- 523 (713)
T COG2217 470 FEEIP---GRGVEA---EVDG--ERVLVGNARLLGEEGID---------LPL-------LSERIEALES-EGKTVVFVA- 523 (713)
T ss_pred eeeec---cCcEEE---EECC--EEEEEcCHHHHhhcCCC---------ccc-------hhhhHHHHHh-cCCeEEEEE-
Confidence 11111 111111 1122 45677998877653211 110 1222333443 676666665
Q ss_pred ccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc
Q 003909 564 KQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY 643 (787)
Q Consensus 564 ~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~ 643 (787)
.|.+++|+++++|++||+++++|++||+.|++++|+|||+..+|+.+|+++||+.
T Consensus 524 ---------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~---------- 578 (713)
T COG2217 524 ---------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE---------- 578 (713)
T ss_pred ---------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh----------
Confidence 4679999999999999999999999999999999999999999999999999977
Q ss_pred cchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCe
Q 003909 644 TASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM 723 (787)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~ 723 (787)
+++++.|++|.+.|+.+|+.|+.|+|||||.||.|+|.+||||||||.|+|.++++||+
T Consensus 579 ---------------------v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADv 637 (713)
T COG2217 579 ---------------------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADV 637 (713)
T ss_pred ---------------------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCE
Confidence 78899999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 724 VLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGE 761 (787)
Q Consensus 724 v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~ 761 (787)
+++++|+..++++++.+|++++++|||+.|++.||...
T Consensus 638 vL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~ 675 (713)
T COG2217 638 VLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIA 675 (713)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999543
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-77 Score=620.65 Aligned_cols=659 Identities=30% Similarity=0.422 Sum_probs=516.7
Q ss_pred ccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 003909 5 YARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGL 84 (787)
Q Consensus 5 ~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (787)
-+.+++|+.+.|.+. +.||+++|+++|++.||+|++.+++.+.+.|++ --|++|.-+..-.++++.+.+ ..+....
T Consensus 19 ~~~p~eeVfeeL~~t-~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl-~Fm~~PlswVMEaAAimA~~L--ang~~~~ 94 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCT-REGLTSDEVEERLKIFGPNKLEEKKESKFLKFL-GFMWNPLSWVMEAAAIMAIGL--ANGGGRP 94 (942)
T ss_pred ccCchhhhHHHHhcC-CCCCchHHHHHHHHhhCchhhhhhhhhHHHHHH-HHHhchHHHHHHHHHHHHHHH--hcCCCCC
Confidence 467899999999886 459999999999999999999988777666654 447788887777777776544 3333345
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeee
Q 003909 85 TAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (787)
Q Consensus 85 ~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~ 164 (787)
..|.+...|..++++|..+++++|+++-.....|+.....+.+|+|||+|.+++++.||||||+.++.|+++|||+++++
T Consensus 95 ~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~ 174 (942)
T KOG0205|consen 95 PDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLE 174 (942)
T ss_pred cchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCccceec
Confidence 67888888888899999999999999999999998888889999999999999999999999999999999999999998
Q ss_pred ecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCC
Q 003909 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (787)
Q Consensus 165 ~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~ 244 (787)
++.+.||+|.|||||.|+.|.++ +.+|+||.+.+|++.++|++||.+|..|+...++.. .+..-
T Consensus 175 --gD~LkiDQSAlTGESLpvtKh~g-------------d~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~G 238 (942)
T KOG0205|consen 175 --GDPLKIDQSALTGESLPVTKHPG-------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVG 238 (942)
T ss_pred --CCccccchhhhcCCccccccCCC-------------CceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcc
Confidence 45899999999999999999984 458999999999999999999999999999888877 55667
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHH-HhcCCchHHHHHHHHHHHHHHhh
Q 003909 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV-AAIPEGLPAVVTTCLALGTKRMA 323 (787)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~-~~~P~~l~~~~~~~~~~~~~~l~ 323 (787)
.+++-++.+.++.+..+++-.++.+++.+... ..........+.+++ ..+|.++|..+++.+++++.+|+
T Consensus 239 HFqkVLt~IGn~ci~si~~g~lie~~vmy~~q---------~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLa 309 (942)
T KOG0205|consen 239 HFQKVLTGIGNFCICSIALGMLIEITVMYPIQ---------HRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLS 309 (942)
T ss_pred cHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhh---------hhhhhhhhhheheeeecccccccceeeeehhhHHHHHHH
Confidence 78888888877765543332222222221111 011122233344444 45999999999999999999999
Q ss_pred hccccccccccccccCCeeEEEeCCCCccccCceEEEE--EEEecccccCcceeEEeecCccccCCCccccCCCccccCC
Q 003909 324 RLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAK--ICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFP 401 (787)
Q Consensus 324 ~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (787)
++|.+.|..+++|.|+-+|++|+|||||||.|+++|.+ +...- .+
T Consensus 310 qqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v-------------~g-------------------- 356 (942)
T KOG0205|consen 310 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFV-------------KG-------------------- 356 (942)
T ss_pred hcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeee-------------cC--------------------
Confidence 99999999999999999999999999999999999977 31110 00
Q ss_pred CChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccc
Q 003909 402 AQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEF 481 (787)
Q Consensus 402 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (787)
-++.-.-+..|.+. ... -.|.+|.|++..... ++ .....|
T Consensus 357 -v~~D~~~L~A~rAs----r~e----------n~DAID~A~v~~L~d----------------PK---------eara~i 396 (942)
T KOG0205|consen 357 -VDKDDVLLTAARAS----RKE----------NQDAIDAAIVGMLAD----------------PK---------EARAGI 396 (942)
T ss_pred -CChHHHHHHHHHHh----hhc----------ChhhHHHHHHHhhcC----------------HH---------HHhhCc
Confidence 01111112222111 110 125677777654321 01 123467
Q ss_pred cEeEeecCCCCCceEEEEEee-CCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhh
Q 003909 482 KKVSILEFSRDRKMMSVLCSH-KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLA 560 (787)
Q Consensus 482 ~~l~~~~f~~~~~~~sviv~~-~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~ 560 (787)
+.+..+||++..|+.+..+.+ +|+-+..+||+|+.|++.|+. +.+.++.+.+.+++|++ .|+|.++
T Consensus 397 kevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~------------~~~i~~~vh~~id~~Ae-RGlRSLg 463 (942)
T KOG0205|consen 397 KEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE------------DHDIPERVHSIIDKFAE-RGLRSLA 463 (942)
T ss_pred eEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc------------cCcchHHHHHHHHHHHH-hcchhhh
Confidence 888999999999998887765 577788899999999999964 23456778888899998 9999999
Q ss_pred hhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccc
Q 003909 561 LALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640 (787)
Q Consensus 561 ~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~ 640 (787)
+|++..+...+... .....|+|++-+-||+|.++.++|++....|++|.|+|||...-++..++++|+-..... +
T Consensus 464 VArq~v~e~~~~~~---g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyp--s 538 (942)
T KOG0205|consen 464 VARQEVPEKTKESP---GGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--S 538 (942)
T ss_pred hhhhccccccccCC---CCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCC--c
Confidence 99998876543322 356789999999999999999999999999999999999999999999999998654322 1
Q ss_pred ccccchh-hccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHh
Q 003909 641 RSYTASE-FEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKS 719 (787)
Q Consensus 641 ~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~ 719 (787)
..+.|.. -+++......+.+....-|+...|+||.++|+.||.+++.++|.|||.||.|+|+.||+|||+.++++.++.
T Consensus 539 s~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~ 618 (942)
T KOG0205|consen 539 SALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARS 618 (942)
T ss_pred hhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcc
Confidence 1111111 122333344455566667999999999999999999999999999999999999999999999999999999
Q ss_pred hcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhhe
Q 003909 720 ASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLIS 784 (787)
Q Consensus 720 ~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~ 784 (787)
++|+|+....++-+..++..+|.++.|++.+..|+++..+-..+.+ ....+-+.+.|+|..+++
T Consensus 619 asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gf-ml~alIw~~df~pfmvli 682 (942)
T KOG0205|consen 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGF-MLIALIWEFDFSPFMVLI 682 (942)
T ss_pred cccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHH-HHHHHHHHhcCCHHHHHH
Confidence 9999999999999999999999999999999999888776655332 222222333455554443
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-76 Score=642.73 Aligned_cols=534 Identities=22% Similarity=0.300 Sum_probs=440.5
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCe-EEEeecCCCCCCcEEEecCCCcccccee
Q 003909 83 GLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGC-FSILPAAELVPGDIVEVNVGCKIPADMR 161 (787)
Q Consensus 83 ~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~-~~~i~~~~Lv~GDII~l~~G~~vPaD~~ 161 (787)
...+|-++..++.++.+..+++.....++...+..|..+.+.++.++.+|+ +++|+.+.+++||+|+|.||++||+||+
T Consensus 337 ~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~ 416 (951)
T KOG0207|consen 337 PPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGV 416 (951)
T ss_pred cchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccE
Confidence 344555566677778888999998888999999999999999999999996 9999999999999999999999999999
Q ss_pred eeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCC
Q 003909 162 MIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTED 241 (787)
Q Consensus 162 il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~ 241 (787)
+++ |+++||||.+|||++|+.|++ ++.|.+||++.+|...+.++++|.+|.+++|.+++.+++.
T Consensus 417 Vv~---Gss~VDEs~iTGEs~PV~Kk~-------------gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~ 480 (951)
T KOG0207|consen 417 VVD---GSSEVDESLITGESMPVPKKK-------------GSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQL 480 (951)
T ss_pred EEe---CceeechhhccCCceecccCC-------------CCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHc
Confidence 996 888999999999999999998 4569999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--CCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Q 003909 242 EVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD--PSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGT 319 (787)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~ 319 (787)
.++|+|+.+|+++.+++|+++++++..+++|++.... .....|...+...|.+++++++++|||+|.++.|++...+.
T Consensus 481 sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvat 560 (951)
T KOG0207|consen 481 SKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVAT 560 (951)
T ss_pred ccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEe
Confidence 9999999999999999999999999999999766542 22233456777889999999999999999999999999999
Q ss_pred HHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCcccc
Q 003909 320 KRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLE 399 (787)
Q Consensus 320 ~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (787)
...+++|+++|..+.||.+.++++|+||||||||+|+|.|.++....+.-
T Consensus 561 gvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~------------------------------ 610 (951)
T KOG0207|consen 561 GVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPI------------------------------ 610 (951)
T ss_pred chhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcc------------------------------
Confidence 99999999999999999999999999999999999999999987653210
Q ss_pred CCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccc
Q 003909 400 FPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEI 479 (787)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (787)
....++.+... .+....||...|+..|++.........
T Consensus 611 ---~~~e~l~~v~a----------------~Es~SeHPig~AIv~yak~~~~~~~~~----------------------- 648 (951)
T KOG0207|consen 611 ---SLKEALALVAA----------------MESGSEHPIGKAIVDYAKEKLVEPNPE----------------------- 648 (951)
T ss_pred ---cHHHHHHHHHH----------------HhcCCcCchHHHHHHHHHhcccccCcc-----------------------
Confidence 11222222221 112335999999999998765221100
Q ss_pred cccEeEeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhh
Q 003909 480 EFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCL 559 (787)
Q Consensus 480 ~~~~l~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l 559 (787)
..+..-.|.-+... +-+..+++. .+-|+-+.+.+.- ... .+ .+++.++.... .|..+.
T Consensus 649 --~~~~~~~~pg~g~~--~~~~~~~~~--i~iGN~~~~~r~~---------~~~--~~----~i~~~~~~~e~-~g~tvv 706 (951)
T KOG0207|consen 649 --GVLSFEYFPGEGIY--VTVTVDGNE--VLIGNKEWMSRNG---------CSI--PD----DILDALTESER-KGQTVV 706 (951)
T ss_pred --ccceeecccCCCcc--cceEEeeeE--EeechHHHHHhcC---------CCC--ch----hHHHhhhhHhh-cCceEE
Confidence 00011111111111 112222222 5678888776632 211 11 13344444333 777777
Q ss_pred hhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccc
Q 003909 560 ALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFV 639 (787)
Q Consensus 560 ~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~ 639 (787)
.++ .|.+++|++.++|++||++..+|+.||+.|++++|+|||+..+|+++|+++|++.
T Consensus 707 ~v~----------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~------ 764 (951)
T KOG0207|consen 707 YVA----------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN------ 764 (951)
T ss_pred EEE----------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce------
Confidence 776 4889999999999999999999999999999999999999999999999999776
Q ss_pred cccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHh
Q 003909 640 GRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKS 719 (787)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~ 719 (787)
||++..|+||.+.++.+|++++.|+|||||.||.|+|.+|||||+|+.+++.+.+
T Consensus 765 -------------------------V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAie 819 (951)
T KOG0207|consen 765 -------------------------VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIE 819 (951)
T ss_pred -------------------------EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999
Q ss_pred hcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 003909 720 ASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIP 774 (787)
Q Consensus 720 ~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~ 774 (787)
+||+|++.||+.+++.+++.+|++.+|+|.|+.|++.||+..+ ++.+..|+.++
T Consensus 820 aADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~I-pIAagvF~P~~ 873 (951)
T KOG0207|consen 820 AADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGI-PIAAGVFAPFG 873 (951)
T ss_pred hCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hhheecccCCc
Confidence 9999999999999999999999999999999999999995322 34444444444
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-74 Score=665.76 Aligned_cols=498 Identities=25% Similarity=0.346 Sum_probs=423.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeee
Q 003909 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM 165 (787)
Q Consensus 86 ~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~ 165 (787)
.|.++..++++++++.+++.+.+.|+++.+++|.++.+.+++|+|||++++|++++|+|||+|.|++||+|||||+|++
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~- 283 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS- 283 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE-
Confidence 4677888888999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred cCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCc
Q 003909 166 LSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245 (787)
Q Consensus 166 ~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~ 245 (787)
|.+.||||+|||||.|+.|.+ ++.||+||.+.+|.+.++|+++|.+|.++++.+.+.+++.+++|
T Consensus 284 --g~~~vdes~lTGEs~Pv~k~~-------------Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~ 348 (741)
T PRK11033 284 --PFASFDESALTGESIPVERAT-------------GEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAP 348 (741)
T ss_pred --CcEEeecccccCCCCCEecCC-------------CCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCCh
Confidence 668999999999999999987 45699999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhc
Q 003909 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARL 325 (787)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~ 325 (787)
+++.+++++.++++++++++++.+++|...+.. .+...+..++++++++|||+|.++.|+++..+..+++|+
T Consensus 349 ~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~--------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~ 420 (741)
T PRK11033 349 IERFIDRFSRIYTPAIMLVALLVILVPPLLFAA--------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARR 420 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHC
Confidence 999999999999999999999998887443321 123456678999999999999999999999999999999
Q ss_pred cccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChh
Q 003909 326 NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLP 405 (787)
Q Consensus 326 ~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (787)
|+++|+.+++|.|+++|++|||||||||+|+|+|.++...+.. ...
T Consensus 421 gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~----------------------------------~~~ 466 (741)
T PRK11033 421 GALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI----------------------------------SES 466 (741)
T ss_pred CeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC----------------------------------CHH
Confidence 9999999999999999999999999999999999998654211 111
Q ss_pred HHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeE
Q 003909 406 CLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVS 485 (787)
Q Consensus 406 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (787)
.+..++. ++. ....||.++|+++++++.+..
T Consensus 467 ~~l~~aa--~~e--------------~~s~hPia~Ai~~~a~~~~~~--------------------------------- 497 (741)
T PRK11033 467 ELLALAA--AVE--------------QGSTHPLAQAIVREAQVRGLA--------------------------------- 497 (741)
T ss_pred HHHHHHH--HHh--------------cCCCCHHHHHHHHHHHhcCCC---------------------------------
Confidence 2222221 111 123599999999998876543
Q ss_pred eecCCCCCceEE---EEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhh
Q 003909 486 ILEFSRDRKMMS---VLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALA 562 (787)
Q Consensus 486 ~~~f~~~~~~~s---viv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a 562 (787)
+||.++++.+. +....+++. +..|+++.+.+ +++ .+.+.+.++.. +|.+++.++
T Consensus 498 -~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~---------------~~~----~~~~~~~~~~~-~g~~~v~va 554 (741)
T PRK11033 498 -IPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP---------------LAD----AFAGQINELES-AGKTVVLVL 554 (741)
T ss_pred -CCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh---------------ccH----HHHHHHHHHHh-CCCEEEEEE
Confidence 12333333332 111123332 34578876543 111 12333455665 899999888
Q ss_pred hccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccc
Q 003909 563 LKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRS 642 (787)
Q Consensus 563 ~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~ 642 (787)
+ |.+++|+++|+|++||+++++|++|+++|++++|+|||+..++..+|+++||.
T Consensus 555 ~----------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~---------- 608 (741)
T PRK11033 555 R----------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID---------- 608 (741)
T ss_pred E----------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----------
Confidence 4 66899999999999999999999999999999999999999999999999995
Q ss_pred ccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcC
Q 003909 643 YTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD 722 (787)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad 722 (787)
.+++..|++|.++++.+++. +.|+|+|||.||++||+.||+||||+++++.++++||
T Consensus 609 ----------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~ad 665 (741)
T PRK11033 609 ----------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETAD 665 (741)
T ss_pred ----------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCC
Confidence 34568899999999999865 5899999999999999999999999999999999999
Q ss_pred eeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 723 MVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEV 762 (787)
Q Consensus 723 ~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~ 762 (787)
+++.++++.++.++++.||++++++++|+.|++.||+..+
T Consensus 666 ivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i 705 (741)
T PRK11033 666 AALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFL 705 (741)
T ss_pred EEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999996444
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-75 Score=603.09 Aligned_cols=699 Identities=21% Similarity=0.248 Sum_probs=516.0
Q ss_pred HHHhhcCCCCCCCCcCcc---HHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHHHHHHHHH
Q 003909 31 RHVRIYGKNVLPQEKRTA---FWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVIT 107 (787)
Q Consensus 31 ~~~~~~g~N~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~l~~~~ 107 (787)
.+.++|.+|++...|++. ++..++.||+-..+.++++.++-.++..+..+. -..+|.+.+.++++.++...+..+.
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~-l~ty~~pl~fvl~itl~keavdd~~ 152 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGY-LSTYWGPLGFVLTITLIKEAVDDLK 152 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecc-hhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 456678899988877643 577888999988888887776666655433221 1234444455555556656665555
Q ss_pred HHHHHHHHHHHHhcCCCee-EEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeeec--CCceEEecccccCCcccc
Q 003909 108 ETNAEKALEELRAYQADIA-TVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEML--SNQLRVDQAILTGESCSV 184 (787)
Q Consensus 108 ~~~~~~~~~~l~~~~~~~~-~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~--~g~~~vdes~ltGEs~pv 184 (787)
+++..+.. +.+.. +.-|+|.... ++++|++||+|+++++++||||+++|..+ +|.|.+.+..|+||++.+
T Consensus 153 r~~rd~~~------Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWK 225 (1051)
T KOG0210|consen 153 RRRRDREL------NSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWK 225 (1051)
T ss_pred HHHhhhhh------hhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccce
Confidence 54433322 22223 3447776555 99999999999999999999999999644 689999999999999866
Q ss_pred ccccccccc----------------------------------cccCCCCCCceEeeccEEecceEEEEEEEecchhhhh
Q 003909 185 EKELDSIIA----------------------------------TNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMG 230 (787)
Q Consensus 185 ~k~~~~~~~----------------------------------~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~ 230 (787)
.|-+.+..+ ++....+-+|.+|++|++.+|.++|+|++||.+|..
T Consensus 226 Lrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs- 304 (1051)
T KOG0210|consen 226 LRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS- 304 (1051)
T ss_pred eeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH-
Confidence 654332221 112355668999999999999999999999999932
Q ss_pred HHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHH
Q 003909 231 SIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAV 310 (787)
Q Consensus 231 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~ 310 (787)
..+...++.+...++..++.+..++...++.++++......+ -..|...+.+++.++...+|.+|-+.
T Consensus 305 --vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~----------~~~wyi~~~RfllLFS~IIPISLRvn 372 (1051)
T KOG0210|consen 305 --VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF----------GSDWYIYIIRFLLLFSSIIPISLRVN 372 (1051)
T ss_pred --HhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC----------CCchHHHHHHHHHHHhhhceeEEEEe
Confidence 122223334444567777777777776666666655443221 12345667788889999999999999
Q ss_pred HHHHHHHHHHHhhhc----cccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeec-Ccccc
Q 003909 311 VTTCLALGTKRMARL----NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVT-GTTYA 385 (787)
Q Consensus 311 ~~~~~~~~~~~l~~~----~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~-~~~~~ 385 (787)
+.++...-.+.+.+. |.++|+.+..|+||+++++.+|||||||+|+|.+++++...--+........+.. ...+.
T Consensus 373 lDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~ 452 (1051)
T KOG0210|consen 373 LDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYT 452 (1051)
T ss_pred hhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhC
Confidence 999999988888764 6789999999999999999999999999999999999876432221110000000 00000
Q ss_pred C---CCccccCCCccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhh
Q 003909 386 P---EGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALN 462 (787)
Q Consensus 386 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~ 462 (787)
+ ++....... +. .....+..+..++++||+..+.++.++...+...+|+|.|++++.+..|+....++...+.
T Consensus 453 ~~~~~~~~~~~~~-k~---~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~it 528 (1051)
T KOG0210|consen 453 PGRNKGKGALSRV-KK---DMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAIT 528 (1051)
T ss_pred CCcccccccchhh-cC---cccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEE
Confidence 0 000000000 11 1344577888999999999888877777788999999999999999999998877655554
Q ss_pred hhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeC--CeeEEEEeCChHHHHHhcccccccCCCccccCCHHHH
Q 003909 463 MLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIR 540 (787)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~--~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~ 540 (787)
...+ ......|+++..|||+|+.|||.+||+++ ++...|.||++..|-..- +..
T Consensus 529 L~~~--------~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV----------------q~N 584 (1051)
T KOG0210|consen 529 LRVP--------LDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV----------------QYN 584 (1051)
T ss_pred EecC--------CCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccc----------------ccc
Confidence 4333 12356899999999999999999999986 788999999988664321 234
Q ss_pred HHHHHHHHHhhccccchhhhhhhccCCccc----------cCCCCCC-------------CCCcEEEEEeccCCCCChhH
Q 003909 541 AELESRLNSLAGKEALRCLALALKQMPINR----------QTLSYDD-------------EKDLTFIGLVGMLDPPREEV 597 (787)
Q Consensus 541 ~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~----------~~~~~~~-------------e~~l~~lG~i~~~d~~~~~~ 597 (787)
+++++...+++. +|+|++++|.|.++.++ +.++..+ |.|+.++|+.+.||++++++
T Consensus 585 dWleEE~gNMAR-EGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dV 663 (1051)
T KOG0210|consen 585 DWLEEECGNMAR-EGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDV 663 (1051)
T ss_pred hhhhhhhhhhhh-hcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhh
Confidence 678888889997 99999999999988432 1122111 78999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccc------------------------ccccccchhhccCC-
Q 003909 598 KNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF------------------------VGRSYTASEFEELP- 652 (787)
Q Consensus 598 ~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~------------------------~~~~~~~~~~~~~~- 652 (787)
+.+++.||++||++||+|||..++|..+|+..++....... ...+++|+.++-..
T Consensus 664 k~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~ 743 (1051)
T KOG0210|consen 664 KPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLK 743 (1051)
T ss_pred HhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHH
Confidence 99999999999999999999999999999999987643321 12334444332211
Q ss_pred --hHHHHHhh--ccceEEEecChhhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceEec-CCccHHHHhhcCeecc
Q 003909 653 --AMQQTVAL--QHMALFTRVEPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGIAM-GSGTAVAKSASDMVLA 726 (787)
Q Consensus 653 --~~~~~~~~--~~~~v~~~~~p~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A~vgia~-~~~~~~~~~~ad~v~~ 726 (787)
+.++.+.. ....++|||+|.||+++++.+|+. +..|+++|||.||+.|+++||+||.+ |+...++.-+||+.+.
T Consensus 744 yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSIt 823 (1051)
T KOG0210|consen 744 YYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSIT 823 (1051)
T ss_pred HHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHH
Confidence 22222222 256799999999999999999976 89999999999999999999999997 5888888899999997
Q ss_pred CCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhh
Q 003909 727 DDNFATIVAAV-AEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVS 781 (787)
Q Consensus 727 ~~~~~~i~~~i-~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~ 781 (787)
. +..+.+++ -|||..|+|.-+.-+|.+-..+++.++..+++....+.|.+-.|
T Consensus 824 q--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~Lyq 877 (1051)
T KOG0210|consen 824 Q--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQ 877 (1051)
T ss_pred H--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhh
Confidence 6 66776665 68999999999999999999998888888777776666655444
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-72 Score=627.71 Aligned_cols=490 Identities=26% Similarity=0.390 Sum_probs=411.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeC-CeEEEeecCCCCCCcEEEecCCCccccceeeee
Q 003909 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN-GCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (787)
Q Consensus 86 ~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~-g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~ 164 (787)
+|..+.+++++++++.+++.+.++|+++.+++|.+..+++++++|+ |.+++|+.++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4455566677788888999999999999999999999999999985 677999999999999999999999999999996
Q ss_pred ecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCC
Q 003909 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (787)
Q Consensus 165 ~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~ 244 (787)
|.+.||||+|||||.|+.|.+ ++.||+||.+.+|.+.++|+++|.+|.++++.+.+.+++.+++
T Consensus 133 ---g~~~vdes~lTGEs~pv~k~~-------------gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~ 196 (562)
T TIGR01511 133 ---GESEVDESLVTGESLPVPKKV-------------GDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKA 196 (562)
T ss_pred ---CceEEehHhhcCCCCcEEcCC-------------CCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCC
Confidence 678999999999999999987 4569999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhh
Q 003909 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMAR 324 (787)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~ 324 (787)
++++..++++.++++++++++++.+++|. ..+..++++++++|||+|++++|+++..+..++++
T Consensus 197 ~~~~~~d~~a~~~~~~v~~~a~~~~~~~~----------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~ 260 (562)
T TIGR01511 197 PIQRLADKVAGYFVPVVIAIALITFVIWL----------------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAK 260 (562)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999998888877653 24677899999999999999999999999999999
Q ss_pred ccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCCh
Q 003909 325 LNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQL 404 (787)
Q Consensus 325 ~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (787)
+|+++|+.+.+|.|+++|++|||||||||+|+|++.++...+.. ..
T Consensus 261 ~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~----------------------------------~~ 306 (562)
T TIGR01511 261 NGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR----------------------------------DR 306 (562)
T ss_pred CCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC----------------------------------CH
Confidence 99999999999999999999999999999999999998654211 11
Q ss_pred hHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEe
Q 003909 405 PCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKV 484 (787)
Q Consensus 405 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 484 (787)
..+..++ .+++.. ..||.+.|+++++++.+..... ....
T Consensus 307 ~~~l~~a--a~~e~~--------------s~HPia~Ai~~~~~~~~~~~~~-------------------------~~~~ 345 (562)
T TIGR01511 307 TELLALA--AALEAG--------------SEHPLAKAIVSYAKEKGITLVE-------------------------VSDF 345 (562)
T ss_pred HHHHHHH--HHHhcc--------------CCChHHHHHHHHHHhcCCCcCC-------------------------CCCe
Confidence 2222222 222221 2489999999999877643210 0001
Q ss_pred EeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhc
Q 003909 485 SILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALK 564 (787)
Q Consensus 485 ~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~ 564 (787)
..++ .+.+...+ ++ ..+..|+++.+.+. +.. .++ +.. +|.+++.++
T Consensus 346 ~~~~----g~Gi~~~~--~g--~~~~iG~~~~~~~~---------~~~--~~~------------~~~-~g~~~~~~~-- 391 (562)
T TIGR01511 346 KAIP----GIGVEGTV--EG--TKIQLGNEKLLGEN---------AIK--IDG------------KAE-QGSTSVLVA-- 391 (562)
T ss_pred EEEC----CceEEEEE--CC--EEEEEECHHHHHhC---------CCC--CCh------------hhh-CCCEEEEEE--
Confidence 1111 11222222 23 23567998876432 111 110 112 666666554
Q ss_pred cCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc
Q 003909 565 QMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT 644 (787)
Q Consensus 565 ~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~ 644 (787)
.|.+++|++.++|+++|+++++|++|+++|++++|+|||+...+..+++++|++
T Consensus 392 --------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------ 445 (562)
T TIGR01511 392 --------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------ 445 (562)
T ss_pred --------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------
Confidence 578999999999999999999999999999999999999999999999999984
Q ss_pred chhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCee
Q 003909 645 ASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMV 724 (787)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v 724 (787)
+|++..|++|.++++.++..++.|+|+|||.||++|++.||+||+||++++.+++.||++
T Consensus 446 --------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advv 505 (562)
T TIGR01511 446 --------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVV 505 (562)
T ss_pred --------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEE
Confidence 466788999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 725 LADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEV 762 (787)
Q Consensus 725 ~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~ 762 (787)
+.++++..+.++++.||++++++++|+.|++.+|+..+
T Consensus 506 l~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i 543 (562)
T TIGR01511 506 LMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAI 543 (562)
T ss_pred EeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999997543
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-72 Score=631.23 Aligned_cols=506 Identities=27% Similarity=0.380 Sum_probs=422.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCC-eEEEeecCCCCCCcEEEecCCCccccceeeee
Q 003909 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNG-CFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (787)
Q Consensus 86 ~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g-~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~ 164 (787)
.|.++..++++++++.+++.++++|+++.++++.+..+..++|+|+| ++++|++++|+|||+|.+++||+|||||++++
T Consensus 17 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~ 96 (556)
T TIGR01525 17 LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS 96 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe
Confidence 46688899999999999999999999999999999999999999996 99999999999999999999999999999996
Q ss_pred ecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCC
Q 003909 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (787)
Q Consensus 165 ~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~ 244 (787)
|.+.||||++|||+.|+.|.+ ++.+|+||.+.+|.++++|+++|.+|.+|++.+.+.+++.+++
T Consensus 97 ---g~~~vdes~lTGEs~pv~k~~-------------g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~ 160 (556)
T TIGR01525 97 ---GESEVDESALTGESMPVEKKE-------------GDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKA 160 (556)
T ss_pred ---cceEEeehhccCCCCCEecCC-------------cCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCC
Confidence 678999999999999999987 4679999999999999999999999999999999998888999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhh
Q 003909 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMAR 324 (787)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~ 324 (787)
++++.+++++.++++++++++++.++++...... ..+..++++++++|||+|+++++++...+..++++
T Consensus 161 ~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~-----------~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~ 229 (556)
T TIGR01525 161 PIQRLADRIASYYVPAVLAIALLTFVVWLALGAL-----------GALYRALAVLVVACPCALGLATPVAILVAIGVAAR 229 (556)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----------hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHH
Confidence 9999999999999999999999888877543211 45778899999999999999999999999999999
Q ss_pred ccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCCh
Q 003909 325 LNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQL 404 (787)
Q Consensus 325 ~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (787)
+|+++|+++++|.||++|++|||||||||+|+|+|.++...+... ...
T Consensus 230 ~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~--------------------------------~~~ 277 (556)
T TIGR01525 230 RGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS--------------------------------ISE 277 (556)
T ss_pred CCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC--------------------------------ccH
Confidence 999999999999999999999999999999999999987542110 001
Q ss_pred hHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEe
Q 003909 405 PCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKV 484 (787)
Q Consensus 405 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 484 (787)
..+..++ ..+. ....||.+.|+++++++.|..... .+ ..
T Consensus 278 ~~~l~~a--~~~e--------------~~~~hp~~~Ai~~~~~~~~~~~~~------------------------~~-~~ 316 (556)
T TIGR01525 278 EELLALA--AALE--------------QSSSHPLARAIVRYAKKRGLELPK------------------------QE-DV 316 (556)
T ss_pred HHHHHHH--HHHh--------------ccCCChHHHHHHHHHHhcCCCccc------------------------cc-Ce
Confidence 1222221 1111 113589999999999877653210 00 00
Q ss_pred EeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhc
Q 003909 485 SILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALK 564 (787)
Q Consensus 485 ~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~ 564 (787)
..+ +. +.....+ ++. ..+..|+++.+ + . ++. .. ...+..+..+.. +|++++.++
T Consensus 317 ~~~---~~-~gi~~~~--~g~-~~~~lg~~~~~-~-~-------~~~--~~-----~~~~~~~~~~~~-~g~~~~~v~-- 370 (556)
T TIGR01525 317 EEV---PG-KGVEATV--DGQ-EEVRIGNPRLL-E-L-------AAE--PI-----SASPDLLNEGES-QGKTVVFVA-- 370 (556)
T ss_pred eEe---cC-CeEEEEE--CCe-eEEEEecHHHH-h-h-------cCC--Cc-----hhhHHHHHHHhh-CCcEEEEEE--
Confidence 111 11 1122222 221 23456777655 1 1 111 00 111233344555 888888877
Q ss_pred cCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCC-CEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc
Q 003909 565 QMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAG-IRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY 643 (787)
Q Consensus 565 ~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~g-i~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~ 643 (787)
.|.+++|.+.++|+++|+++++|++|+++| ++++++|||+...+..+++++|++.
T Consensus 371 --------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------- 426 (556)
T TIGR01525 371 --------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------- 426 (556)
T ss_pred --------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe----------
Confidence 366899999999999999999999999999 9999999999999999999999965
Q ss_pred cchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCe
Q 003909 644 TASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM 723 (787)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~ 723 (787)
+|++..|++|.++++.++..++.|+|+|||.||++|++.||+||++|++++.+++.||+
T Consensus 427 ---------------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~ 485 (556)
T TIGR01525 427 ---------------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADI 485 (556)
T ss_pred ---------------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCE
Confidence 77888999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 724 VLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEV 762 (787)
Q Consensus 724 v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~ 762 (787)
++.++++.++.++++.||++++++++++.|++.+|+..+
T Consensus 486 vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i 524 (556)
T TIGR01525 486 VLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAI 524 (556)
T ss_pred EEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999996544
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-71 Score=623.61 Aligned_cols=487 Identities=43% Similarity=0.586 Sum_probs=421.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceE
Q 003909 94 LLILAANAAVGVITETNAEKALEELRA--YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLR 171 (787)
Q Consensus 94 l~~~~~~~~l~~~~~~~~~~~~~~l~~--~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~ 171 (787)
+++++++.+++.++++++++..+.+.+ ..+.+++|+|+| ++.|++++|+|||+|.+++||+|||||++++ |.+.
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~---g~~~ 78 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLS---GSCF 78 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE---ccEE
Confidence 345566777888899999999999988 778899999999 9999999999999999999999999999996 6899
Q ss_pred EecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHH
Q 003909 172 VDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLD 251 (787)
Q Consensus 172 vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~ 251 (787)
||||+|||||.|+.|.+ ++.+++||.+.+|.+.+.|+.+|.+|..+++...+..+...++++++..+
T Consensus 79 vdes~LTGEs~pv~k~~-------------g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~ 145 (499)
T TIGR01494 79 VDESNLTGESVPVLKTA-------------GDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLD 145 (499)
T ss_pred EEcccccCCCCCeeecc-------------CCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHH
Confidence 99999999999999987 44589999999999999999999999999999988887777899999999
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhcccccc
Q 003909 252 EFG-TFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVR 330 (787)
Q Consensus 252 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k 330 (787)
++. .++++++++++++.+++|...+... ..+...+..++++++++|||+|+++++++...+..+++++|+++|
T Consensus 146 ~~~~~~~~~~~~~la~~~~~~~~~~~~~~------~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk 219 (499)
T TIGR01494 146 RLSDIIFILFVLLIALAVFLFWAIGLWDP------NSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVR 219 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccc------ccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEe
Confidence 999 7888888888888777765432110 024567888999999999999999999999999999999999999
Q ss_pred ccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChhHHHHH
Q 003909 331 SLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHI 410 (787)
Q Consensus 331 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (787)
+++.+|.||++|++|||||||||+|+|++.++.+.+.
T Consensus 220 ~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------------------------------------- 256 (499)
T TIGR01494 220 SLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG------------------------------------------- 256 (499)
T ss_pred chhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC-------------------------------------------
Confidence 9999999999999999999999999999999864310
Q ss_pred HHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCC
Q 003909 411 ARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFS 490 (787)
Q Consensus 411 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~ 490 (787)
++..+||.+.|++.+++..+ +...||+
T Consensus 257 --------------------~~~s~hp~~~ai~~~~~~~~---------------------------------~~~~~f~ 283 (499)
T TIGR01494 257 --------------------EYLSGHPDERALVKSAKWKI---------------------------------LNVFEFS 283 (499)
T ss_pred --------------------CcCCCChHHHHHHHHhhhcC---------------------------------cceeccC
Confidence 01235899999998875311 1356899
Q ss_pred CCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccc
Q 003909 491 RDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINR 570 (787)
Q Consensus 491 ~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~ 570 (787)
+.+++|+++++.+++ .|+||+++.+.+.|.+ +.+...+++. +|+|++++|++
T Consensus 284 ~~~~~~~~~~~~~~~--~~~~G~~~~i~~~~~~-------------------~~~~~~~~~~-~g~~~~~~a~~------ 335 (499)
T TIGR01494 284 SVRKRMSVIVRGPDG--TYVKGAPEFVLSRVKD-------------------LEEKVKELAQ-SGLRVLAVASK------ 335 (499)
T ss_pred CCCceEEEEEecCCc--EEEeCCHHHHHHhhHH-------------------HHHHHHHHHh-CCCEEEEEEEC------
Confidence 999999999986433 4789999999998842 1122334555 89999999853
Q ss_pred cCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhcc
Q 003909 571 QTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEE 650 (787)
Q Consensus 571 ~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~ 650 (787)
.+++|++.++|++|+++.++|+.|+++|++++|+|||+..++..+|+++|+
T Consensus 336 ----------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi------------------- 386 (499)
T TIGR01494 336 ----------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI------------------- 386 (499)
T ss_pred ----------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------------------
Confidence 379999999999999999999999999999999999999999999999985
Q ss_pred CChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCc
Q 003909 651 LPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNF 730 (787)
Q Consensus 651 ~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~ 730 (787)
+++.+|++|.++++.++..|+.|+|+|||.||++|+++||+||+|+ ++++||+++.++++
T Consensus 387 ---------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l 446 (499)
T TIGR01494 387 ---------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNL 446 (499)
T ss_pred ---------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCH
Confidence 4568999999999999999999999999999999999999999997 68899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 003909 731 ATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDT 776 (787)
Q Consensus 731 ~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~ 776 (787)
..+..++++||++++++++++.|++.+|+..+.+.+.+.++.+..+
T Consensus 447 ~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~~~~~~~ 492 (499)
T TIGR01494 447 STIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAVLNLVPP 492 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999887666655554444333
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-71 Score=621.57 Aligned_cols=485 Identities=26% Similarity=0.382 Sum_probs=410.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeee
Q 003909 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM 165 (787)
Q Consensus 86 ~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~ 165 (787)
.|+++..++++++++.+++.++++|+++.++++.+..+.+++|+|+|+++++++++|+|||+|.+++||+|||||++++
T Consensus 17 ~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~- 95 (536)
T TIGR01512 17 EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLS- 95 (536)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEe-
Confidence 5788888999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred cCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCc
Q 003909 166 LSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245 (787)
Q Consensus 166 ~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~ 245 (787)
|.+.||||++||||.|+.|.+ ++.+|+||.+.+|.++++|++||.+|.+|++.+.+.+++.++++
T Consensus 96 --g~~~vdes~lTGEs~pv~k~~-------------g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~ 160 (536)
T TIGR01512 96 --GTSTVDESALTGESVPVEKAP-------------GDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAK 160 (536)
T ss_pred --CcEEEEecccCCCCCcEEeCC-------------CCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhhCCCh
Confidence 678999999999999999987 45699999999999999999999999999999999988888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhc
Q 003909 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARL 325 (787)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~ 325 (787)
+++.+++++.+++++++.++++.++++..... +...+.+++++++++|||+|+++++++...+..+++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~ 230 (536)
T TIGR01512 161 TQRFIDRFARYYTPVVLAIALAIWLVPGLLKR----------WPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARH 230 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------cHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHC
Confidence 99999999999999999988888877653221 11256778999999999999999999999999999999
Q ss_pred cccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChh
Q 003909 326 NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLP 405 (787)
Q Consensus 326 ~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (787)
|+++|+++++|++|++|++|||||||||+|+|+|.++...
T Consensus 231 gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------------------------- 270 (536)
T TIGR01512 231 GILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------------------------- 270 (536)
T ss_pred CeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH----------------------------------------
Confidence 9999999999999999999999999999999999987421
Q ss_pred HHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeE
Q 003909 406 CLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVS 485 (787)
Q Consensus 406 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (787)
.+..++. ++. ....||.+.|+++++++.+ .. ....
T Consensus 271 ~~l~~a~--~~e--------------~~~~hp~~~Ai~~~~~~~~--~~---------------------------~~~~ 305 (536)
T TIGR01512 271 EVLRLAA--AAE--------------QASSHPLARAIVDYARKRE--NV---------------------------ESVE 305 (536)
T ss_pred HHHHHHH--HHh--------------ccCCCcHHHHHHHHHHhcC--CC---------------------------cceE
Confidence 1112211 111 1235899999999987653 10 0011
Q ss_pred eecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhcc
Q 003909 486 ILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQ 565 (787)
Q Consensus 486 ~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~ 565 (787)
.+| . +.+... .+++. +..|+++.+.+.. . . .+.. +|.+++.++
T Consensus 306 ~~~---g-~gi~~~--~~g~~--~~ig~~~~~~~~~---------~----~------------~~~~-~~~~~~~v~--- 348 (536)
T TIGR01512 306 EVP---G-EGVRAV--VDGGE--VRIGNPRSLEAAV---------G----A------------RPES-AGKTIVHVA--- 348 (536)
T ss_pred Eec---C-CeEEEE--ECCeE--EEEcCHHHHhhcC---------C----c------------chhh-CCCeEEEEE---
Confidence 111 1 111111 13332 3458876553311 0 0 1112 454444333
Q ss_pred CCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCC-EEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc
Q 003909 566 MPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGI-RVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT 644 (787)
Q Consensus 566 ~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi-~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~ 644 (787)
.|..++|.+.++|+++|+++++|++|+++|+ +++++|||+...+..+++++|++.
T Consensus 349 -------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~----------- 404 (536)
T TIGR01512 349 -------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE----------- 404 (536)
T ss_pred -------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-----------
Confidence 4789999999999999999999999999999 999999999999999999999976
Q ss_pred chhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC-CccHHHHhhcCe
Q 003909 645 ASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDM 723 (787)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~-~~~~~~~~~ad~ 723 (787)
+|++..|++|.++++.++..++.|+|+|||.||++|++.||+||++| ++++.+++.||+
T Consensus 405 --------------------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~ 464 (536)
T TIGR01512 405 --------------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADV 464 (536)
T ss_pred --------------------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCE
Confidence 56778899999999999999999999999999999999999999999 889999999999
Q ss_pred eccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 724 VLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEV 762 (787)
Q Consensus 724 v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~ 762 (787)
++.++++..+.++++.||++++++++|+.|++.||+..+
T Consensus 465 vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i 503 (536)
T TIGR01512 465 VLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLI 503 (536)
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999995444
|
. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-70 Score=646.37 Aligned_cols=504 Identities=25% Similarity=0.325 Sum_probs=422.2
Q ss_pred chh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeee
Q 003909 87 FLE-PSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM 165 (787)
Q Consensus 87 ~~~-~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~ 165 (787)
|++ +..+++++.++.+++.+.+.|+++.+++|.+..|+.++++|+|++++|+.++|+|||+|.|++||+|||||+|++
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~- 363 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQ- 363 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE-
Confidence 444 677788889999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred cCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCc
Q 003909 166 LSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245 (787)
Q Consensus 166 ~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~ 245 (787)
|.+.||||+|||||.|+.|.+ ++.||+||.+.+|.+.++|+++|.+|.++++.+++.+++..+++
T Consensus 364 --g~~~vdeS~lTGEs~pv~k~~-------------gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~ 428 (834)
T PRK10671 364 --GEAWLDEAMLTGEPIPQQKGE-------------GDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPE 428 (834)
T ss_pred --ceEEEeehhhcCCCCCEecCC-------------CCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCc
Confidence 678999999999999999988 45699999999999999999999999999999999998888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhc
Q 003909 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARL 325 (787)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~ 325 (787)
+++..++++.++++++++++++.+++|+..... ..+...+.+++++++++|||+|++++|+++..+..+++++
T Consensus 429 ~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~-------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~ 501 (834)
T PRK10671 429 IGQLADKISAVFVPVVVVIALVSAAIWYFFGPA-------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEF 501 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHC
Confidence 999999999999999999998888777543211 1234567789999999999999999999999999999999
Q ss_pred cccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChh
Q 003909 326 NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLP 405 (787)
Q Consensus 326 ~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (787)
|+++|+.+.+|.++++|++|||||||||+|+|+|.++...+.. ...
T Consensus 502 gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~----------------------------------~~~ 547 (834)
T PRK10671 502 GVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV----------------------------------DEA 547 (834)
T ss_pred CeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC----------------------------------CHH
Confidence 9999999999999999999999999999999999987643211 011
Q ss_pred HHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeE
Q 003909 406 CLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVS 485 (787)
Q Consensus 406 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (787)
.+..+ +.+++.. ..||.+.|++++++....... ..++
T Consensus 548 ~~l~~--a~~~e~~--------------s~hp~a~Ai~~~~~~~~~~~~------------------------~~~~--- 584 (834)
T PRK10671 548 QALRL--AAALEQG--------------SSHPLARAILDKAGDMTLPQV------------------------NGFR--- 584 (834)
T ss_pred HHHHH--HHHHhCC--------------CCCHHHHHHHHHHhhCCCCCc------------------------ccce---
Confidence 12222 2222221 258999999988753221100 0000
Q ss_pred eecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhcc
Q 003909 486 ILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQ 565 (787)
Q Consensus 486 ~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~ 565 (787)
.+ +. +.+... .++. .+.+|+++.+.+.. . . +..+.+.++.+.. +|.+++.+++
T Consensus 585 ~~---~g-~Gv~~~--~~g~--~~~~G~~~~~~~~~---------~----~---~~~~~~~~~~~~~-~g~~~v~va~-- 637 (834)
T PRK10671 585 TL---RG-LGVSGE--AEGH--ALLLGNQALLNEQQ---------V----D---TKALEAEITAQAS-QGATPVLLAV-- 637 (834)
T ss_pred Ee---cc-eEEEEE--ECCE--EEEEeCHHHHHHcC---------C----C---hHHHHHHHHHHHh-CCCeEEEEEE--
Confidence 00 01 111111 1332 34669999764421 1 1 1223444555555 8888888773
Q ss_pred CCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccc
Q 003909 566 MPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTA 645 (787)
Q Consensus 566 ~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~ 645 (787)
|..++|++.+.|+++|+++++|++|++.|++++|+|||+..++..+++++|++.
T Consensus 638 --------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------ 691 (834)
T PRK10671 638 --------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------ 691 (834)
T ss_pred --------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------
Confidence 568999999999999999999999999999999999999999999999999975
Q ss_pred hhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeec
Q 003909 646 SEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVL 725 (787)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~ 725 (787)
+|++..|++|.++++.++..++.|+|+|||.||++|++.||+||+||++++.++++||+++
T Consensus 692 -------------------~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl 752 (834)
T PRK10671 692 -------------------VIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITL 752 (834)
T ss_pred -------------------EEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEE
Confidence 7888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 726 ADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEV 762 (787)
Q Consensus 726 ~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~ 762 (787)
.++++.++.++++.||+++.++++|+.|++.||++.+
T Consensus 753 ~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i 789 (834)
T PRK10671 753 MRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGI 789 (834)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999996544
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-72 Score=636.45 Aligned_cols=711 Identities=21% Similarity=0.249 Sum_probs=530.0
Q ss_pred HHhhcCCCCCCCCcCcc---HHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHHHHHHHHHH
Q 003909 32 HVRIYGKNVLPQEKRTA---FWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITE 108 (787)
Q Consensus 32 ~~~~~g~N~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~l~~~~~ 108 (787)
+...|-.|.+.+.|++. +++++++||++..++++++.++++++. +. ..+.|...+.+++++.++..-+.+.+
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~----~~~~~~~~~pl~~vl~~t~iKd~~eD 102 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS----PFNPYTTLVPLLFVLGITAIKDAIED 102 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc----ccCccceeeceeeeehHHHHHHHHhh
Confidence 55588999999888755 589999999999999999999998877 33 22334444455555554444444333
Q ss_pred HHHHHHHHHHHhcCCCeeEEEeCCe-EEEeecCCCCCCcEEEecCCCccccceeeeeec--CCceEEecccccCCccccc
Q 003909 109 TNAEKALEELRAYQADIATVLRNGC-FSILPAAELVPGDIVEVNVGCKIPADMRMIEML--SNQLRVDQAILTGESCSVE 185 (787)
Q Consensus 109 ~~~~~~~~~l~~~~~~~~~v~r~g~-~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~--~g~~~vdes~ltGEs~pv~ 185 (787)
+|..+.=. +.+..++.|.|++. +++..|++|++||+|++..++.+|||.++++++ +|.|+|++++|+||+..+.
T Consensus 103 ~rR~~~D~---~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 103 YRRHKQDK---EVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred hhhhhccH---HhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 33322221 12334678888644 899999999999999999999999999999644 5889999999999999887
Q ss_pred ccccccccc---------------------------------ccC-CCCCCceEeeccEEec-ceEEEEEEEecchhhhh
Q 003909 186 KELDSIIAT---------------------------------NAV-YQDKTNILFSGTVVVA-GRARAVVVGVGANTAMG 230 (787)
Q Consensus 186 k~~~~~~~~---------------------------------~~~-~~~~~~~l~~Gt~v~~-g~~~~~V~~tg~~T~~~ 230 (787)
|........ ... +....+++.+|+.+.+ .++.+.|+.||++|.++
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~ 259 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLM 259 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHH
Confidence 754222110 011 5566788999999986 57899999999999664
Q ss_pred HHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-------CCCCc---chhhHHHHHHHHHHHHH
Q 003909 231 SIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD-------PSHGG---FLRGAIHYFKIAVALAV 300 (787)
Q Consensus 231 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~~~~~i~~l~ 300 (787)
+ +...+..+++++++.++.+...+..+.+.++++..+....+... .++.. ........|..++.++.
T Consensus 260 ~---n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~ 336 (1151)
T KOG0206|consen 260 Q---NSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQ 336 (1151)
T ss_pred H---hcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhh
Confidence 4 34446778889999999988888888777777776655444321 11111 11233455667777888
Q ss_pred HhcCCchHHHHHHHHHHHHHHhh----------hccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEeccccc
Q 003909 301 AAIPEGLPAVVTTCLALGTKRMA----------RLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQ 370 (787)
Q Consensus 301 ~~~P~~l~~~~~~~~~~~~~~l~----------~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~ 370 (787)
..+|.+|++.+.+....++..+. .....+|+.+..|+||+|++|+.|||||||+|.|.+.+|.+.+..+.
T Consensus 337 ~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg 416 (1151)
T KOG0206|consen 337 YLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYG 416 (1151)
T ss_pred ceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccc
Confidence 99999999999999999886654 34688999999999999999999999999999999999999887665
Q ss_pred CcceeEE-eecCcc------ccCCCccccCCCccc--cC-CCChhHHHHHHHHhhhcccccccccCCC-CCceeccChhH
Q 003909 371 GPIIAEY-GVTGTT------YAPEGVVFDSSGIQL--EF-PAQLPCLLHIARCSALCNESVLQYNPDK-GNYEKIGEATE 439 (787)
Q Consensus 371 ~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~ 439 (787)
....+.. ...... ....+..+.+..... +. ....+....+..++++||+......++. ...+...+|+|
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE 496 (1151)
T KOG0206|consen 417 RNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDE 496 (1151)
T ss_pred cCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcH
Confidence 4322110 000000 000111111111000 00 0245566788899999999877653333 45778899999
Q ss_pred HHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeC-CeeEEEEeCChHHHH
Q 003909 440 VALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK-QMCVMFSKGAPESVL 518 (787)
Q Consensus 440 ~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~-~~~~~~~kG~~e~il 518 (787)
.|++..|+..|+....+.+..+...... ....|+++..++|+|.||||||||+.+ ++..+||||++..|.
T Consensus 497 ~AlV~aAr~~gf~f~~Rt~~~vti~~~g---------~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~ 567 (1151)
T KOG0206|consen 497 AALVEAARELGFVFLGRTPDSVTIRELG---------VEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIF 567 (1151)
T ss_pred HHHHHHHHhcCceeeeccCceEEEeccc---------cceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhH
Confidence 9999999999999988876665544111 245899999999999999999999986 589999999999999
Q ss_pred HhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccC------------CC----------CC
Q 003909 519 SRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQT------------LS----------YD 576 (787)
Q Consensus 519 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~------------~~----------~~ 576 (787)
+++.. .....+++-.+++++|+. +|+|++++|||.+++++.. .. ..
T Consensus 568 erL~~-----------~~~~~~e~T~~Hl~~yA~-eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~ 635 (1151)
T KOG0206|consen 568 ERLSK-----------NGEKLREKTQEHLEEYAT-EGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEE 635 (1151)
T ss_pred hhhhh-----------cchHHHHHHHHHHHHHHh-hhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHH
Confidence 99964 123456667788999998 9999999999999853210 00 11
Q ss_pred CCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccc------------------
Q 003909 577 DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF------------------ 638 (787)
Q Consensus 577 ~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~------------------ 638 (787)
.|+||+++|..++||+++++++++|..|++||||+|++|||..+||..++..|++....-..
T Consensus 636 iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~ 715 (1151)
T KOG0206|consen 636 IEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATA 715 (1151)
T ss_pred HHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHH
Confidence 18999999999999999999999999999999999999999999999999999997653210
Q ss_pred -------------------------ccccccchhhccCChH-HHHH-----hhccceEEEecChhhHHHHHHHHhhC-CC
Q 003909 639 -------------------------VGRSYTASEFEELPAM-QQTV-----ALQHMALFTRVEPSHKRMLVEALQNQ-NE 686 (787)
Q Consensus 639 -------------------------~~~~~~~~~~~~~~~~-~~~~-----~~~~~~v~~~~~p~~K~~~v~~l~~~-~~ 686 (787)
.+.+++|..+....+. .... .-++..++||++|.||+.+++..++. +.
T Consensus 716 ~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~ 795 (1151)
T KOG0206|consen 716 ALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKA 795 (1151)
T ss_pred HHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCc
Confidence 0112222222111111 1111 11256789999999999999999754 78
Q ss_pred EEEEEcCCccCHHHHhhCCceEecC-CccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 687 VVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCI 765 (787)
Q Consensus 687 ~v~~vGDg~ND~~ml~~A~vgia~~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~ 765 (787)
.+++||||.||++|++.|||||.++ .+..++..+||+.+....+..-.. +-|||+.|.|+.+++.|.++.|+...+.+
T Consensus 796 ~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLL-LVHGhW~Y~R~a~~ilyfFYKNi~f~~~~ 874 (1151)
T KOG0206|consen 796 VTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLL-LVHGHWSYIRLAKMILYFFYKNIAFTFTL 874 (1151)
T ss_pred eEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhh-eeecceeHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999986 788899999999998765544433 35999999999999999999999999999
Q ss_pred HHHHHhcCCC
Q 003909 766 FVAAVLGIPD 775 (787)
Q Consensus 766 ~~~~~~~~~~ 775 (787)
|.+.++..++
T Consensus 875 fwy~f~~gfS 884 (1151)
T KOG0206|consen 875 FWYQFFNGFS 884 (1151)
T ss_pred HHhhhcCCCC
Confidence 8888877664
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-68 Score=563.23 Aligned_cols=643 Identities=24% Similarity=0.327 Sum_probs=454.7
Q ss_pred CCCCH-HHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHHHHHHHHHHH
Q 003909 22 KGLTD-SQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAAN 100 (787)
Q Consensus 22 ~GLs~-~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~ 100 (787)
+|+.. .++.+....||+|+.+.+.+ +|-.+|.+.-..+++.+..++..+++.- .+|+.++.-+++++.-
T Consensus 161 ~G~~~~~~i~~a~~~~G~N~fdi~vP-tF~eLFkE~A~aPfFVFQVFcvgLWCLD---------eyWYySlFtLfMli~f 230 (1160)
T KOG0209|consen 161 TGHEEESEIKLAKHKYGKNKFDIVVP-TFSELFKEHAVAPFFVFQVFCVGLWCLD---------EYWYYSLFTLFMLIAF 230 (1160)
T ss_pred cCcchHHHHHHHHHHhcCCccccCCc-cHHHHHHHhccCceeeHhHHhHHHHHhH---------HHHHHHHHHHHHHHHH
Confidence 46653 45555556699999988665 6778888877777776666554444322 3445544444444332
Q ss_pred HHHHHHHHHHHHHHHHHHHhc--CCCeeEEEeCCeEEEeecCCCCCCcEEEecC---CCccccceeeeeecCCceEEecc
Q 003909 101 AAVGVITETNAEKALEELRAY--QADIATVLRNGCFSILPAAELVPGDIVEVNV---GCKIPADMRMIEMLSNQLRVDQA 175 (787)
Q Consensus 101 ~~l~~~~~~~~~~~~~~l~~~--~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~---G~~vPaD~~il~~~~g~~~vdes 175 (787)
..--+.|+. +.+.+++++ .+..+.|+|+++|+.+.+++|.|||+|.|.. ...||||.+++. |.|.|||+
T Consensus 231 E~tlV~Qrm---~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~---GsciVnEa 304 (1160)
T KOG0209|consen 231 EATLVKQRM---RTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLR---GSCIVNEA 304 (1160)
T ss_pred HHHHHHHHH---HHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEe---cceeechh
Confidence 222233333 344445444 4556899999999999999999999999977 578999999995 99999999
Q ss_pred cccCCcccccccccccccccc----CCCCCCceEeeccEEec-------------ceEEEEEEEecchhhhhHHHHHhcc
Q 003909 176 ILTGESCSVEKELDSIIATNA----VYQDKTNILFSGTVVVA-------------GRARAVVVGVGANTAMGSIRDSMLQ 238 (787)
Q Consensus 176 ~ltGEs~pv~k~~~~~~~~~~----~~~~~~~~l~~Gt~v~~-------------g~~~~~V~~tg~~T~~~~i~~~~~~ 238 (787)
+|||||.|..|.+....+... ...++.+++|+||.+++ |-+.+.|++||.+|..|++.+.+..
T Consensus 305 MLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf 384 (1160)
T KOG0209|consen 305 MLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILF 384 (1160)
T ss_pred hhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEe
Confidence 999999999998754443222 12235679999999984 7899999999999999999999888
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Q 003909 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWI-VNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLAL 317 (787)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~ 317 (787)
...+.+.-.... + +++.+.+++++++.. +|.--..++ .+.-+..|.-++.++...+|+-||+-++++...
T Consensus 385 ~aervTaNn~Et--f--~FILFLlVFAiaAa~Yvwv~Gskd~-----~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNs 455 (1160)
T KOG0209|consen 385 SAERVTANNRET--F--IFILFLLVFAIAAAGYVWVEGSKDP-----TRSRYKLFLECTLILTSVVPPELPMELSMAVNS 455 (1160)
T ss_pred cceeeeeccHHH--H--HHHHHHHHHHHHhhheEEEecccCc-----chhhhheeeeeeEEEeccCCCCCchhhhHHHHH
Confidence 655555433322 2 222222222222211 111001111 122234455566677888999999999999999
Q ss_pred HHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCcc
Q 003909 318 GTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQ 397 (787)
Q Consensus 318 ~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (787)
+...|+|.+++|..+=++.-.|++|.-|||||||||+..|.|+++.-...... . .... +
T Consensus 456 SL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~-~------~~~~----------s---- 514 (1160)
T KOG0209|consen 456 SLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEG-A------LTPA----------S---- 514 (1160)
T ss_pred HHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcc-c------ccch----------h----
Confidence 99999999999999999999999999999999999999999999865322110 0 0000 0
Q ss_pred ccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccc
Q 003909 398 LEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHW 477 (787)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (787)
......+.-++.|+++.. .+ ....|||.|+|.+.. .|+.....+. ..++ +..
T Consensus 515 ---~~p~~t~~vlAscHsLv~-----le-----~~lVGDPlEKA~l~~---v~W~~~k~~~----v~p~--------~~~ 566 (1160)
T KOG0209|consen 515 ---KAPNETVLVLASCHSLVL-----LE-----DKLVGDPLEKATLEA---VGWNLEKKNS----VCPR--------EGN 566 (1160)
T ss_pred ---hCCchHHHHHHHHHHHHH-----hc-----CcccCChHHHHHHHh---cCcccccCcc----cCCC--------cCC
Confidence 011233444444444322 11 125799999998864 4554421110 0000 001
Q ss_pred cccccEeEeecCCCCCceEEEEEeeCC-----eeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhc
Q 003909 478 EIEFKKVSILEFSRDRKMMSVLCSHKQ-----MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAG 552 (787)
Q Consensus 478 ~~~~~~l~~~~f~~~~~~~sviv~~~~-----~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (787)
....++.+.+.|+|..|||||++...+ ++++.+||+||.|.++.+... ...++...+|+.
T Consensus 567 ~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP---------------~dY~~iYk~ytR 631 (1160)
T KOG0209|consen 567 GKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDVP---------------KDYDEIYKRYTR 631 (1160)
T ss_pred CcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhCc---------------hhHHHHHHHHhh
Confidence 125677888999999999999988753 688999999999998875433 225556677887
Q ss_pred cccchhhhhhhccCCccccC----CCCC-CCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Q 003909 553 KEALRCLALALKQMPINRQT----LSYD-DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH 627 (787)
Q Consensus 553 ~~g~~~l~~a~~~~~~~~~~----~~~~-~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~ 627 (787)
+|.||+|++||+++.-... ...+ .|+|+.|.|++.|.-|++++++++|++|++.+++++|+|||++.+|.++|+
T Consensus 632 -~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak 710 (1160)
T KOG0209|consen 632 -QGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAK 710 (1160)
T ss_pred -ccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehh
Confidence 9999999999999843221 2222 289999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCccc-----------------c--------------------ccccccchhhccCChH-HHHHhhccceEEEec
Q 003909 628 KIGAFDHLVD-----------------F--------------------VGRSYTASEFEELPAM-QQTVALQHMALFTRV 669 (787)
Q Consensus 628 ~~gi~~~~~~-----------------~--------------------~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~ 669 (787)
++||....-. . .+.+++|+.++.+... .....+..+.||+|+
T Consensus 711 ~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARv 790 (1160)
T KOG0209|consen 711 EVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARV 790 (1160)
T ss_pred eeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEee
Confidence 9998754110 0 0123344444443332 334555678899999
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHh------------------------------
Q 003909 670 EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKS------------------------------ 719 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~------------------------------ 719 (787)
.|.||..++..+++.|+.++|+|||.||+++||.||||||+=|+.+..++
T Consensus 791 aP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 870 (1160)
T KOG0209|consen 791 APKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPP 870 (1160)
T ss_pred ChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCC
Confidence 99999999999999999999999999999999999999997433321111
Q ss_pred -----------------------------------------hcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 720 -----------------------------------------ASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYM 754 (787)
Q Consensus 720 -----------------------------------------~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~ 754 (787)
+|.+.....+.++|.++|+.||+++-++.|++...
T Consensus 871 ~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKIL 946 (1160)
T KOG0209|consen 871 VPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKIL 946 (1160)
T ss_pred CCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHHH
Confidence 33444445567889999999999999999988753
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-59 Score=475.25 Aligned_cols=522 Identities=25% Similarity=0.346 Sum_probs=403.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-eeEEEeC-CeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceEE
Q 003909 95 LILAANAAVGVITETNAEKALEELRAYQAD-IATVLRN-GCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRV 172 (787)
Q Consensus 95 ~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~-~~~v~r~-g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~v 172 (787)
+.+++..+-+.+.|-|.+.....|++.+.+ .++++++ |.++.|++.+|+.||+|.++.||.||+||.+++ |..+|
T Consensus 74 fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe---G~asV 150 (681)
T COG2216 74 FTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE---GVASV 150 (681)
T ss_pred HHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe---eeeec
Confidence 334455566677777877777777665543 3566665 899999999999999999999999999999997 77889
Q ss_pred ecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHHH
Q 003909 173 DQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDE 252 (787)
Q Consensus 173 des~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~~ 252 (787)
|||.+||||-||-|+.+.- .+-+-.||.+++.+++.+++....+|.+.++..+++.++++++|.+-.+.-
T Consensus 151 dESAITGESaPViresGgD----------~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~i 220 (681)
T COG2216 151 DESAITGESAPVIRESGGD----------FSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTI 220 (681)
T ss_pred chhhccCCCcceeeccCCC----------cccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHH
Confidence 9999999999999987621 123889999999999999999999999999999999999999997776654
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhcccccccc
Q 003909 253 FGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSL 332 (787)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~ 332 (787)
+..-+..+.+++....+-+. .|.. .. .......++++++.+|-.+.-.++..-..++.|+.+.+++.++.
T Consensus 221 LL~~LTliFL~~~~Tl~p~a--~y~~---g~-----~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SG 290 (681)
T COG2216 221 LLSGLTLIFLLAVATLYPFA--IYSG---GG-----AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSG 290 (681)
T ss_pred HHHHHHHHHHHHHHhhhhHH--HHcC---CC-----CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCc
Confidence 43333222222211111111 1110 00 01244568899999999999999988889999999999999999
Q ss_pred ccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChhHHHHHHH
Q 003909 333 PSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIAR 412 (787)
Q Consensus 333 ~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (787)
++.|..|.+|++..|||||+|-|+-.-.++.+.+... ..+++.
T Consensus 291 RAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~-------------------------------------~~~la~ 333 (681)
T COG2216 291 RAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVS-------------------------------------EEELAD 333 (681)
T ss_pred chhhhcCCccEEEecccCceeecchhhhheecCCCCC-------------------------------------HHHHHH
Confidence 9999999999999999999999987777766553221 223344
Q ss_pred HhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCcccccccc-EeEeecCCC
Q 003909 413 CSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFK-KVSILEFSR 491 (787)
Q Consensus 413 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~f~~ 491 (787)
...+++-. -..|..++++.++++.+...... ... .....||+.
T Consensus 334 aa~lsSl~-------------DeTpEGrSIV~LA~~~~~~~~~~-----------------------~~~~~~~fvpFtA 377 (681)
T COG2216 334 AAQLASLA-------------DETPEGRSIVELAKKLGIELRED-----------------------DLQSHAEFVPFTA 377 (681)
T ss_pred HHHHhhhc-------------cCCCCcccHHHHHHHhccCCCcc-----------------------cccccceeeecce
Confidence 33333211 02466688999999887443110 001 235689999
Q ss_pred CCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCcccc
Q 003909 492 DRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQ 571 (787)
Q Consensus 492 ~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~ 571 (787)
+.|++.+-...+ ...-||+.+.+.+.-+.. +.. .. ..++...++-+. .|-..++++
T Consensus 378 ~TRmSGvd~~~~---~~irKGA~dai~~~v~~~-----~g~--~p----~~l~~~~~~vs~-~GGTPL~V~--------- 433 (681)
T COG2216 378 QTRMSGVDLPGG---REIRKGAVDAIRRYVRER-----GGH--IP----EDLDAAVDEVSR-LGGTPLVVV--------- 433 (681)
T ss_pred ecccccccCCCC---ceeecccHHHHHHHHHhc-----CCC--CC----HHHHHHHHHHHh-cCCCceEEE---------
Confidence 988777654333 556899999999876521 111 11 334555555555 676666665
Q ss_pred CCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccC
Q 003909 572 TLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEEL 651 (787)
Q Consensus 572 ~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~ 651 (787)
.|.+++|++.++|-++|+.+|-+.+||+.||+.+|+|||++.+|..+|++.|+++
T Consensus 434 -------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd------------------ 488 (681)
T COG2216 434 -------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------ 488 (681)
T ss_pred -------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh------------------
Confidence 4779999999999999999999999999999999999999999999999999998
Q ss_pred ChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCch
Q 003909 652 PAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFA 731 (787)
Q Consensus 652 ~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~ 731 (787)
..++++|++|.++++.-|..|+-|+|+|||.||+|+|.+||||+||.+|+..+|++++.|=+|.|+-
T Consensus 489 -------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PT 555 (681)
T COG2216 489 -------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPT 555 (681)
T ss_pred -------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCcc
Confidence 5677999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 003909 732 TIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIP 774 (787)
Q Consensus 732 ~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~ 774 (787)
.+.+.++.|+..+-.=-....|+++..+.-.+.++-+.|...+
T Consensus 556 KlievV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~ 598 (681)
T COG2216 556 KLIEVVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAY 598 (681)
T ss_pred ceehHhhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhc
Confidence 9999999999987655555567776665555555544444444
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=296.21 Aligned_cols=228 Identities=32% Similarity=0.522 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCe-eEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceE
Q 003909 93 ILLILAANAAVGVITETNAEKALEELRAYQADI-ATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLR 171 (787)
Q Consensus 93 il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~ 171 (787)
++++++++.+++.++++|+++..+++.+..+++ ++|+|||+++++++++|+|||+|.|++||++||||++++ +|.++
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~--~g~~~ 79 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE--SGSAY 79 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE--SSEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee--ccccc
Confidence 566777788899999999999999998888877 899999999999999999999999999999999999996 69999
Q ss_pred EecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHH
Q 003909 172 VDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLD 251 (787)
Q Consensus 172 vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~ 251 (787)
||||.+|||+.|+.|.+. ..+.+|++|+||.+.+|+++++|++||.+|..+++.+.....+.+++++++.++
T Consensus 80 vd~s~ltGes~pv~k~~~--------~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~ 151 (230)
T PF00122_consen 80 VDESALTGESEPVKKTPL--------PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLN 151 (230)
T ss_dssp EECHHHHSBSSEEEESSS--------CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHH
T ss_pred cccccccccccccccccc--------cccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhH
Confidence 999999999999999853 345689999999999999999999999999999999999888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccccccc
Q 003909 252 EFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRS 331 (787)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~ 331 (787)
++..++.+++++++++++++++.... ...+...+..+++++++++|++||++++++...+.++++++|+++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~ 224 (230)
T PF00122_consen 152 KIAKILIIIILAIAILVFIIWFFNDS-------GISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKN 224 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHTGST-------TCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred HHHHHHHhcccccchhhhccceeccc-------ccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeC
Confidence 99999999998888888876655211 12334567788999999999999999999999999999999999999
Q ss_pred cccccc
Q 003909 332 LPSVET 337 (787)
Q Consensus 332 ~~~le~ 337 (787)
.+++|.
T Consensus 225 ~~a~E~ 230 (230)
T PF00122_consen 225 LSALEA 230 (230)
T ss_dssp TTHHHH
T ss_pred cccccC
Confidence 999884
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-26 Score=239.33 Aligned_cols=273 Identities=18% Similarity=0.255 Sum_probs=204.8
Q ss_pred EeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCC----------------------
Q 003909 510 SKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMP---------------------- 567 (787)
Q Consensus 510 ~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~---------------------- 567 (787)
--|-.+.+.+.|+++|++ ..+.|++..+|.++.+.+.... ..-+|+++|||+..
T Consensus 696 n~g~ad~~~eACTdfWdG--adi~PlSg~dkkkV~DFY~Rac--lsG~C~AfaYkP~~caLasqL~GKciEl~~~p~~Sk 771 (1354)
T KOG4383|consen 696 NFGFADFFEEACTDFWDG--ADIIPLSGRDKKKVKDFYLRAC--LSGHCLAFAYKPCFCALASQLAGKCIELPLNPEHSK 771 (1354)
T ss_pred cccHHHHHHHHhhhhcCC--ceeeecCcchHHHHHHHHHHHh--hcccchheecccHHHHHHHHhCCceEEeccCcccch
Confidence 347778899999999987 5678999999999988887665 33469999999754
Q ss_pred ------------ccc---cCCCCC---------------CCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCC
Q 003909 568 ------------INR---QTLSYD---------------DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGD 617 (787)
Q Consensus 568 ------------~~~---~~~~~~---------------~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd 617 (787)
+++ +..... .-.+.+|.|++..+.+.+++....|+.|.++.|+++..|-.
T Consensus 772 I~T~celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~E 851 (1354)
T KOG4383|consen 772 IETACELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKE 851 (1354)
T ss_pred hhhhccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecch
Confidence 000 000000 03578899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhCCCCCcccccc--------------------------------ccccchhhccCChH-----------
Q 003909 618 NKSTAESICHKIGAFDHLVDFVG--------------------------------RSYTASEFEELPAM----------- 654 (787)
Q Consensus 618 ~~~~a~~~a~~~gi~~~~~~~~~--------------------------------~~~~~~~~~~~~~~----------- 654 (787)
+....+.+|+++|+...+++-.. ...+..+.+.+..+
T Consensus 852 dELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~ 931 (1354)
T KOG4383|consen 852 DELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQK 931 (1354)
T ss_pred HHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccc
Confidence 99999999999999987764100 00000000000000
Q ss_pred ---------------HHHHhh--------------ccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCcc--CHHHHhh
Q 003909 655 ---------------QQTVAL--------------QHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVN--DAPALKK 703 (787)
Q Consensus 655 ---------------~~~~~~--------------~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~N--D~~ml~~ 703 (787)
.+...+ .-+-.|.+++|+.-.++++.+|++|++++.+|...| ....+-+
T Consensus 932 ~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflk 1011 (1354)
T KOG4383|consen 932 MDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLK 1011 (1354)
T ss_pred cccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEc
Confidence 000000 012479999999999999999999999999999988 4556689
Q ss_pred CCceEecCC-------------ccHH-HHh-----------------hcCeeccCCCchHHHHHHHHHHHHHHHHHHHHH
Q 003909 704 ADIGIAMGS-------------GTAV-AKS-----------------ASDMVLADDNFATIVAAVAEGRAIYNNTKQFIR 752 (787)
Q Consensus 704 A~vgia~~~-------------~~~~-~~~-----------------~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~ 752 (787)
||++||+.. ++.. ..+ ++|+.......-.+..+|+.+|..+..+|+++.
T Consensus 1012 adISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfL 1091 (1354)
T KOG4383|consen 1012 ADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFL 1091 (1354)
T ss_pred cceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 999999831 1111 111 234444444566778899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCchhHhhhheec
Q 003909 753 YMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVN 786 (787)
Q Consensus 753 ~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~ 786 (787)
|.++..+...+.+|++.++.+|.-++..+++|+.
T Consensus 1092 FiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lS 1125 (1354)
T KOG4383|consen 1092 FILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLS 1125 (1354)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhccchHHHHH
Confidence 9999999999999999999999999999999964
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.7e-21 Score=192.57 Aligned_cols=97 Identities=48% Similarity=0.781 Sum_probs=91.9
Q ss_pred CcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHh
Q 003909 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVA 659 (787)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (787)
++.++|.+.+.|+++|++.++|+.|+++|++++|+|||+..++..+++++||....
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~------------------------ 170 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDSI------------------------ 170 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSEE------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccccc------------------------
Confidence 78899999999999999999999999999999999999999999999999996533
Q ss_pred hccceEEEec--ChhhH--HHHHHHHhhCCCEEEEEcCCccCHHHHhhCC
Q 003909 660 LQHMALFTRV--EPSHK--RMLVEALQNQNEVVAMTGDGVNDAPALKKAD 705 (787)
Q Consensus 660 ~~~~~v~~~~--~p~~K--~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~ 705 (787)
+|++. +|++| .++++.++..++.|+|+|||.||++|+++||
T Consensus 171 -----v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 171 -----VFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -----EEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -----ccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 89999 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.4e-15 Score=127.73 Aligned_cols=125 Identities=22% Similarity=0.331 Sum_probs=111.4
Q ss_pred CcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHh
Q 003909 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVA 659 (787)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (787)
-+...+.++--.++-+++.++|++|++. ++++++|||...+....|+-.|++...
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r------------------------ 72 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER------------------------ 72 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee------------------------
Confidence 3467888999999999999999999999 999999999999999999999987643
Q ss_pred hccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec-C--CccHHHHhhcCeeccCCCchHHHHH
Q 003909 660 LQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM-G--SGTAVAKSASDMVLADDNFATIVAA 736 (787)
Q Consensus 660 ~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~-~--~~~~~~~~~ad~v~~~~~~~~i~~~ 736 (787)
+|+...|+.|..+++.|+++++.|.|+|||.||.+||+.||+||+. + +....+..+||+++.+ ...+.++
T Consensus 73 -----v~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 73 -----VFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -----eecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 8899999999999999999999999999999999999999999985 3 6778888999999975 4444444
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.8e-14 Score=148.93 Aligned_cols=149 Identities=17% Similarity=0.177 Sum_probs=104.3
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc---chhh-------------------
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT---ASEF------------------- 648 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~---~~~~------------------- 648 (787)
.++.+.++++|++++++|++++++|||+...+..+.+++|++.+.++.+|..+. +..+
T Consensus 18 ~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~ 97 (266)
T PRK10976 18 HTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHD 97 (266)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhcc
Confidence 469999999999999999999999999999999999999988654443321110 0000
Q ss_pred ----------------ccCCh------------------------------------HHHH---Hhhc-----cceE---
Q 003909 649 ----------------EELPA------------------------------------MQQT---VALQ-----HMAL--- 665 (787)
Q Consensus 649 ----------------~~~~~------------------------------------~~~~---~~~~-----~~~v--- 665 (787)
..... +... ..+. ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 177 (266)
T PRK10976 98 NPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNVSFS 177 (266)
T ss_pred cCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEEEEe
Confidence 00000 0000 0000 0000
Q ss_pred ---EEecCh--hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcC--eeccCCCchHHH
Q 003909 666 ---FTRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD--MVLADDNFATIV 734 (787)
Q Consensus 666 ---~~~~~p--~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad--~v~~~~~~~~i~ 734 (787)
+.+..| ..|...++.+.+. .+.|++|||+.||++||+.||+||||+||.+.+|+.|| +|+.+|+.+||+
T Consensus 178 ~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa 257 (266)
T PRK10976 178 TLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVP 257 (266)
T ss_pred CCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHH
Confidence 111222 2466666665543 35789999999999999999999999999999999988 788999999999
Q ss_pred HHHHH
Q 003909 735 AAVAE 739 (787)
Q Consensus 735 ~~i~~ 739 (787)
++|++
T Consensus 258 ~~l~~ 262 (266)
T PRK10976 258 HYLRK 262 (266)
T ss_pred HHHHH
Confidence 99863
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.9e-14 Score=149.09 Aligned_cols=150 Identities=16% Similarity=0.166 Sum_probs=106.0
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc---ch--------------------
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT---AS-------------------- 646 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~---~~-------------------- 646 (787)
+..+.+.++++|++|+++|++++++|||+...+..+.+++|+..+.++.+|..+. +.
T Consensus 17 ~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~ 96 (272)
T PRK15126 17 DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQW 96 (272)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhh
Confidence 3469999999999999999999999999999999999999998654433321110 00
Q ss_pred ---------------------hh----------------ccCC------------hHH---HHHhhc-----cceE----
Q 003909 647 ---------------------EF----------------EELP------------AMQ---QTVALQ-----HMAL---- 665 (787)
Q Consensus 647 ---------------------~~----------------~~~~------------~~~---~~~~~~-----~~~v---- 665 (787)
.. ..+. .+. ....+. ...+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~ 176 (272)
T PRK15126 97 DTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSA 176 (272)
T ss_pred hcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence 00 0000 000 000000 0001
Q ss_pred --EEecChh--hHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCe--eccCCCchHHHH
Q 003909 666 --FTRVEPS--HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM--VLADDNFATIVA 735 (787)
Q Consensus 666 --~~~~~p~--~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~--v~~~~~~~~i~~ 735 (787)
+.+..|. .|...++.+.+. .+.|++|||+.||++||+.|++||||+||.+.+|+.||+ |+.+|+.+||++
T Consensus 177 ~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~ 256 (272)
T PRK15126 177 TDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSH 256 (272)
T ss_pred CcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHH
Confidence 1122222 477777776544 357999999999999999999999999999999999997 788999999999
Q ss_pred HHHH
Q 003909 736 AVAE 739 (787)
Q Consensus 736 ~i~~ 739 (787)
+|++
T Consensus 257 ~l~~ 260 (272)
T PRK15126 257 YLTH 260 (272)
T ss_pred HHHH
Confidence 9853
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.1e-14 Score=148.12 Aligned_cols=148 Identities=25% Similarity=0.293 Sum_probs=108.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccch-h-----------------------
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTAS-E----------------------- 647 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~-~----------------------- 647 (787)
++.+.++++|++++++|++++++|||+...+..+.+++++..+.+..+|..+... +
T Consensus 20 ~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 99 (264)
T COG0561 20 TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQ 99 (264)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhcc
Confidence 4999999999999999999999999999999999999999976554333111000 0
Q ss_pred -------------------------------------hccCC----------hHHHHH---hh----c-cceEE------
Q 003909 648 -------------------------------------FEELP----------AMQQTV---AL----Q-HMALF------ 666 (787)
Q Consensus 648 -------------------------------------~~~~~----------~~~~~~---~~----~-~~~v~------ 666 (787)
..... .+.... .+ . ....+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~ 179 (264)
T COG0561 100 GIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPI 179 (264)
T ss_pred CceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCc
Confidence 00000 000000 00 0 01111
Q ss_pred -EecCh--hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 667 -TRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 667 -~~~~p--~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
.+..| ..|...++.+.+. .+.|++|||+.||++||+.|+.||||+||.+.+|+.||+++.+++.+||++++++
T Consensus 180 ~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 180 SLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred eEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 12222 3688777777653 3469999999999999999999999999999999999999999999999999975
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3e-14 Score=147.63 Aligned_cols=67 Identities=25% Similarity=0.347 Sum_probs=58.9
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 673 HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 673 ~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
.|...++.+.+. .+.|++||||.||++||+.||+||||+||.+.+|+.||+|+.+++.+||+++|++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 566666666543 3578999999999999999999999999999999999999999999999999864
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.2e-14 Score=142.82 Aligned_cols=148 Identities=22% Similarity=0.265 Sum_probs=106.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc-c---chhh-----c-------------
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-T---ASEF-----E------------- 649 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~-~---~~~~-----~------------- 649 (787)
.+.+.+.++|++|+++|++++++|||+...+..+++++|+..+.+..+|..+ . +... +
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 4899999999999999999999999999999999999999866554443221 1 0000 0
Q ss_pred --------cC---------------ChHHHHHhhcc----ceE-----EEecChh--hHHHHHHHHhhC----CCEEEEE
Q 003909 650 --------EL---------------PAMQQTVALQH----MAL-----FTRVEPS--HKRMLVEALQNQ----NEVVAMT 691 (787)
Q Consensus 650 --------~~---------------~~~~~~~~~~~----~~v-----~~~~~p~--~K~~~v~~l~~~----~~~v~~v 691 (787)
.. ..+.....+.. ..+ +.+..|. .|...++.+.+. .+.+++|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 00 00000011100 001 1122332 377777666543 4578999
Q ss_pred cCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 692 GDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 692 GDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
||+.||++|++.|++|+||+|+.+.+|+.||+|+.+++.+||++++++
T Consensus 180 GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred CCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHHH
Confidence 999999999999999999999999999999999999999999999863
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.9e-14 Score=139.37 Aligned_cols=147 Identities=20% Similarity=0.220 Sum_probs=106.1
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccch--hh--ccCCh-------------
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTAS--EF--EELPA------------- 653 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~--~~--~~~~~------------- 653 (787)
.++.+++.++|++|+++|++++++|||++..+..+++++++..+.+..+|..+... .. .....
T Consensus 17 ~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (215)
T TIGR01487 17 RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFP 96 (215)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhh
Confidence 35999999999999999999999999999999999999999866555444222110 00 00000
Q ss_pred ----------------------HHHHHhhcc--ceE-----EEecC--hhhHHHHHHHHhhC----CCEEEEEcCCccCH
Q 003909 654 ----------------------MQQTVALQH--MAL-----FTRVE--PSHKRMLVEALQNQ----NEVVAMTGDGVNDA 698 (787)
Q Consensus 654 ----------------------~~~~~~~~~--~~v-----~~~~~--p~~K~~~v~~l~~~----~~~v~~vGDg~ND~ 698 (787)
+.....+.. ..+ +.... ...|...++.+.+. .+.+++|||+.||+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~ 176 (215)
T TIGR01487 97 RDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDI 176 (215)
T ss_pred hhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 000000000 001 11222 24677777777553 34689999999999
Q ss_pred HHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHH
Q 003909 699 PALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 699 ~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i 737 (787)
+|++.|++|+||+|+.+.+|+.||+|+.+++.+||++++
T Consensus 177 ~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 177 DLFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 999999999999999999999999999999999998764
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.8e-13 Score=152.19 Aligned_cols=67 Identities=25% Similarity=0.391 Sum_probs=57.7
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 673 HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 673 ~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
.|...++.+.+. .+.|++||||.||++||+.||+||||+||.+.+|+.||+|+.+|+.+||+++|++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 455555555443 2478999999999999999999999999999999999999999999999999864
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-13 Score=109.01 Aligned_cols=69 Identities=33% Similarity=0.614 Sum_probs=65.6
Q ss_pred cccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHH
Q 003909 4 AYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVIS 72 (787)
Q Consensus 4 ~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (787)
||..+++|+++.|+++...||+++||.+|+++||+|+++.++++++|+.++++|.+++++++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 899999999999999999999999999999999999999989999999999999999999999988875
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.6e-13 Score=134.79 Aligned_cols=148 Identities=20% Similarity=0.244 Sum_probs=105.3
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc-cchh----h-ccCCh-----------
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-TASE----F-EELPA----------- 653 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~-~~~~----~-~~~~~----------- 653 (787)
..+.+.++++|++++++|++++++|||+...+..+++++|+..+.+..+|..+ .... + ..+..
T Consensus 14 ~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (225)
T TIGR01482 14 RAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKT 93 (225)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhcc
Confidence 35889999999999999999999999999999999999997766554333211 1000 0 00000
Q ss_pred -------------------------HHHHHhhcc----ce-----EEEecCh--hhHHHHHHHHhhC----CCEEEEEcC
Q 003909 654 -------------------------MQQTVALQH----MA-----LFTRVEP--SHKRMLVEALQNQ----NEVVAMTGD 693 (787)
Q Consensus 654 -------------------------~~~~~~~~~----~~-----v~~~~~p--~~K~~~v~~l~~~----~~~v~~vGD 693 (787)
+........ .. .+....| ..|...++.+.+. .+.+++|||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD 173 (225)
T TIGR01482 94 FPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD 173 (225)
T ss_pred cchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC
Confidence 000000000 00 0112222 3677777776543 457999999
Q ss_pred CccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchH----HHHHHH
Q 003909 694 GVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFAT----IVAAVA 738 (787)
Q Consensus 694 g~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~----i~~~i~ 738 (787)
+.||++||+.|++|+||+|+.+.+|+.||+|+.+++.+| |.++++
T Consensus 174 ~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 174 SENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred CHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 777664
|
catalyze the same reaction as SPP. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.1e-13 Score=137.24 Aligned_cols=148 Identities=19% Similarity=0.226 Sum_probs=105.9
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhh-----ccC-------------
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEF-----EEL------------- 651 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~-----~~~------------- 651 (787)
..++.++++++|++|+++|++++++|||++..+..+.+++++..+.+..+|..+..... ..+
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 35689999999999999999999999999999999999999986655443322200000 000
Q ss_pred ------------------C--------------------------------------hHH-------HHHhhccceEEE-
Q 003909 652 ------------------P--------------------------------------AMQ-------QTVALQHMALFT- 667 (787)
Q Consensus 652 ------------------~--------------------------------------~~~-------~~~~~~~~~v~~- 667 (787)
. .+. +.........+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 0 000 000000000111
Q ss_pred ------ecC--hhhHHHHHHHHhh----CCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHH
Q 003909 668 ------RVE--PSHKRMLVEALQN----QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVA 735 (787)
Q Consensus 668 ------~~~--p~~K~~~v~~l~~----~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~ 735 (787)
..+ ...|...++.+.+ ..+.++++||+.||++||+.||.|+||+|+.+.+++.||+++.+++.+||++
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHH
Confidence 122 2468877777764 2468899999999999999999999999999999999999999888899998
Q ss_pred HH
Q 003909 736 AV 737 (787)
Q Consensus 736 ~i 737 (787)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 75
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.7e-13 Score=138.34 Aligned_cols=157 Identities=21% Similarity=0.267 Sum_probs=106.7
Q ss_pred CcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc---chh---------
Q 003909 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT---ASE--------- 647 (787)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~---~~~--------- 647 (787)
|++++. =..++.+.++++|++++++|++++++|||+...+..+++++++..+.++.+|..+. ..+
T Consensus 11 DGTLl~---~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l~~~~l~~ 87 (272)
T PRK10530 11 DGTLLT---PKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVLEADPLPV 87 (272)
T ss_pred CCceEC---CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEEEecCCCH
Confidence 555552 23468999999999999999999999999999999999999987654433221110 000
Q ss_pred ---------------------------------h-------ccCCh---------HHHHHhh---cc-ceEE--------
Q 003909 648 ---------------------------------F-------EELPA---------MQQTVAL---QH-MALF-------- 666 (787)
Q Consensus 648 ---------------------------------~-------~~~~~---------~~~~~~~---~~-~~v~-------- 666 (787)
+ ..... ......+ .. ..+.
T Consensus 88 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 167 (272)
T PRK10530 88 QQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFALTHEDLPQ 167 (272)
T ss_pred HHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEEEecCCHHH
Confidence 0 00000 0000000 00 0000
Q ss_pred -----------------------EecCh--hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHH
Q 003909 667 -----------------------TRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVA 717 (787)
Q Consensus 667 -----------------------~~~~p--~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~ 717 (787)
....| ..|...++.+.+. .+.+++|||+.||++|++.||+||||+|+.+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~l 247 (272)
T PRK10530 168 LQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAV 247 (272)
T ss_pred HHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHH
Confidence 01111 2455555555432 357899999999999999999999999999999
Q ss_pred HhhcCeeccCCCchHHHHHHHH
Q 003909 718 KSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 718 ~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
|+.||+|+.+++.+||+++|++
T Consensus 248 k~~Ad~v~~~n~~dGv~~~l~~ 269 (272)
T PRK10530 248 KARADLVIGDNTTPSIAEFIYS 269 (272)
T ss_pred HHhCCEEEecCCCCcHHHHHHH
Confidence 9999999999999999999863
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.8e-13 Score=111.23 Aligned_cols=91 Identities=36% Similarity=0.601 Sum_probs=71.9
Q ss_pred hhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCc
Q 003909 415 ALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRK 494 (787)
Q Consensus 415 ~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~ 494 (787)
.+||++.+..+++.......|+|+|.||+.++.+.|.... .......++++..+||+|+||
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~-------------------~~~~~~~~~~~~~~pF~S~rK 61 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGID-------------------IKEIRSKYKIVAEIPFDSERK 61 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCc-------------------HHHHHhhcceeEEEccCcccc
Confidence 3788887765555444447899999999999999865431 012346789999999999999
Q ss_pred eEEEEEeeCCeeEEEEeCChHHHHHhcccc
Q 003909 495 MMSVLCSHKQMCVMFSKGAPESVLSRCTNI 524 (787)
Q Consensus 495 ~~sviv~~~~~~~~~~kG~~e~il~~c~~~ 524 (787)
+|+|++++++.+.+|+||+||.|+++|+++
T Consensus 62 ~msvv~~~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 62 RMSVVVRNDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred eeEEEEeCCCEEEEEcCCChHHHHHhcCCC
Confidence 999999954557779999999999999763
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.2e-12 Score=128.84 Aligned_cols=147 Identities=20% Similarity=0.190 Sum_probs=100.9
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc-cchh--------h--ccCChHHH-----
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-TASE--------F--EELPAMQQ----- 656 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~-~~~~--------~--~~~~~~~~----- 656 (787)
..+.++++|++|+++|++++++|||+...+..+.+++|+..+.++.+|..+ .... . ..+..+..
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 555799999999999999999999999999999999998766655444222 1100 0 00000000
Q ss_pred ----------------------------------H--------------------Hhhc--cceE-----EEecCh--hh
Q 003909 657 ----------------------------------T--------------------VALQ--HMAL-----FTRVEP--SH 673 (787)
Q Consensus 657 ----------------------------------~--------------------~~~~--~~~v-----~~~~~p--~~ 673 (787)
. ..+. ...+ +....| ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0 0000 0000 111111 24
Q ss_pred HHHHHHHHhh----C--CCEEEEEcCCccCHHHHhhCCceEecCCcc---HHHHhh--c-CeeccCCCchHHHHHHHH
Q 003909 674 KRMLVEALQN----Q--NEVVAMTGDGVNDAPALKKADIGIAMGSGT---AVAKSA--S-DMVLADDNFATIVAAVAE 739 (787)
Q Consensus 674 K~~~v~~l~~----~--~~~v~~vGDg~ND~~ml~~A~vgia~~~~~---~~~~~~--a-d~v~~~~~~~~i~~~i~~ 739 (787)
|...++.+.+ . .+.++++||+.||++||+.||+||||+|+. +.+|+. | ++|+.+++.+||++++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 5555555543 3 567999999999999999999999999998 578887 4 599999999999999864
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.3e-11 Score=127.56 Aligned_cols=157 Identities=15% Similarity=0.092 Sum_probs=103.8
Q ss_pred CcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCC-CCcccccccccc-chh--------h-
Q 003909 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF-DHLVDFVGRSYT-ASE--------F- 648 (787)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~-~~~~~~~~~~~~-~~~--------~- 648 (787)
|++++. =+..+.+.++++|++|+++|++++++|||+...+..+++++|++ .+.+..+|..+. ... .
T Consensus 15 DGTLL~---~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~ 91 (271)
T PRK03669 15 DGTLLD---SHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRI 91 (271)
T ss_pred ccCCcC---CCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEe
Confidence 555542 13357789999999999999999999999999999999999986 344444332221 100 0
Q ss_pred -ccCChHHH---------------------------------------HH----------------------hhc--cce
Q 003909 649 -EELPAMQQ---------------------------------------TV----------------------ALQ--HMA 664 (787)
Q Consensus 649 -~~~~~~~~---------------------------------------~~----------------------~~~--~~~ 664 (787)
..+..+.. .. .+. ...
T Consensus 92 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 171 (271)
T PRK03669 92 ISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQ 171 (271)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCE
Confidence 00000000 00 000 000
Q ss_pred E-----EEecCh--hhHHHHHHHHhh-------CCCEEEEEcCCccCHHHHhhCCceEecCCcc-HH-----HHhhcCee
Q 003909 665 L-----FTRVEP--SHKRMLVEALQN-------QNEVVAMTGDGVNDAPALKKADIGIAMGSGT-AV-----AKSASDMV 724 (787)
Q Consensus 665 v-----~~~~~p--~~K~~~v~~l~~-------~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~-~~-----~~~~ad~v 724 (787)
+ +.+..| ..|...++.+.+ ..+.|++|||+.||++||+.||+||||+|+. +. .+..+|++
T Consensus 172 ~~~~~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~ 251 (271)
T PRK03669 172 FVQGARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYR 251 (271)
T ss_pred EEecCeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEe
Confidence 0 112222 256665555543 4567999999999999999999999999655 32 45589999
Q ss_pred ccCCCchHHHHHHHH
Q 003909 725 LADDNFATIVAAVAE 739 (787)
Q Consensus 725 ~~~~~~~~i~~~i~~ 739 (787)
+...+.+|+.+++++
T Consensus 252 ~~~~~~~g~~~~l~~ 266 (271)
T PRK03669 252 TQREGPEGWREGLDH 266 (271)
T ss_pred ccCCCcHHHHHHHHH
Confidence 999999999999864
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.5e-12 Score=129.47 Aligned_cols=147 Identities=22% Similarity=0.314 Sum_probs=103.6
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc-c--h---------------------
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT-A--S--------------------- 646 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~-~--~--------------------- 646 (787)
.++.+++.++|++|+++|++++++|||+...+..+.+++|+..+.+..+|..+. . .
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~ 94 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKK 94 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999987554432221100 0 0
Q ss_pred -----------------h----h--------------ccC---------------ChH---HHHHhhc------cceE--
Q 003909 647 -----------------E----F--------------EEL---------------PAM---QQTVALQ------HMAL-- 665 (787)
Q Consensus 647 -----------------~----~--------------~~~---------------~~~---~~~~~~~------~~~v-- 665 (787)
. . ... ... .....+. ...+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (256)
T TIGR00099 95 HGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVS 174 (256)
T ss_pred cCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEE
Confidence 0 0 000 000 0000010 0001
Q ss_pred ----EEecCh--hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHH
Q 003909 666 ----FTRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVA 735 (787)
Q Consensus 666 ----~~~~~p--~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~ 735 (787)
+.+..| ..|...++.+.+. .+.++++||+.||++|++.|++|+||+|+.+.+|+.||+++.+++.+||++
T Consensus 175 s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~ 254 (256)
T TIGR00099 175 SGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVAL 254 (256)
T ss_pred ecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhh
Confidence 112222 2577777776653 357899999999999999999999999999999999999999999999987
Q ss_pred HH
Q 003909 736 AV 737 (787)
Q Consensus 736 ~i 737 (787)
+|
T Consensus 255 ~l 256 (256)
T TIGR00099 255 AL 256 (256)
T ss_pred hC
Confidence 53
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.8e-11 Score=127.44 Aligned_cols=129 Identities=17% Similarity=0.282 Sum_probs=100.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc---cccccccchhhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD---FVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
++.|++.+.++.|++.|++++++||.....+..+.+++|++....+ ..+..+++..... -
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~-----------------i 243 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGD-----------------I 243 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCc-----------------c
Confidence 5899999999999999999999999999889999999999653211 0011111110000 0
Q ss_pred cChhhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 669 VEPSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
...+.|.+.++.+.++ .+.++++|||.||++|++.||+|||| |+.+.+++.||+++..++++++..++-
T Consensus 244 v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 244 VDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 2235677777776543 46899999999999999999999999 999999999999999999999988764
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.3e-11 Score=114.07 Aligned_cols=106 Identities=16% Similarity=0.226 Sum_probs=88.0
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe--cChhhHHH
Q 003909 599 NAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR--VEPSHKRM 676 (787)
Q Consensus 599 ~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~p~~K~~ 676 (787)
.+|+.|+++|+++.++|+.+...++...+.+|+... |.. -.|+.-..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~-------------------------------f~~~kpkp~~~~~ 89 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF-------------------------------HEGIKKKTEPYAQ 89 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE-------------------------------EecCCCCHHHHHH
Confidence 689999999999999999999999999999999752 211 22444455
Q ss_pred HHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHH
Q 003909 677 LVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVA 735 (787)
Q Consensus 677 ~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~ 735 (787)
+++.+.-..+.+++|||+.||++|++.|++++||+|+.+.+++.|++|+.+++.+|++.
T Consensus 90 ~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~v~ 148 (169)
T TIGR02726 90 MLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGAVR 148 (169)
T ss_pred HHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCHHH
Confidence 55555545678999999999999999999999999999999999999998777766543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.22 E-value=9.6e-11 Score=121.18 Aligned_cols=150 Identities=19% Similarity=0.197 Sum_probs=103.8
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccc-hh----------------hc--c
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTA-SE----------------FE--E 650 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~-~~----------------~~--~ 650 (787)
++.+.++++++|++|+++|++++++|||+...+..+++++|+..+.++.+|..+.. .. +. .
T Consensus 19 ~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (273)
T PRK00192 19 HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELG 98 (273)
T ss_pred CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcC
Confidence 34678899999999999999999999999999999999999986655544432210 00 00 0
Q ss_pred CChHHH-------------------------------------HHh----hc----------------------cce---
Q 003909 651 LPAMQQ-------------------------------------TVA----LQ----------------------HMA--- 664 (787)
Q Consensus 651 ~~~~~~-------------------------------------~~~----~~----------------------~~~--- 664 (787)
+..+.. ... +. ...
T Consensus 99 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 178 (273)
T PRK00192 99 PPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTR 178 (273)
T ss_pred CCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEE
Confidence 000000 000 00 000
Q ss_pred --EEEecCh-hhHHHHHHHHhh----CC-CEEEEEcCCccCHHHHhhCCceEecCCccHHHH----hhc-Ceec--cCCC
Q 003909 665 --LFTRVEP-SHKRMLVEALQN----QN-EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAK----SAS-DMVL--ADDN 729 (787)
Q Consensus 665 --v~~~~~p-~~K~~~v~~l~~----~~-~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~----~~a-d~v~--~~~~ 729 (787)
-+....| ..|...++.+.+ .. +.|++|||+.||++|++.||+|+||+||.+.+| .+| +.++ .+++
T Consensus 179 ~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~ 258 (273)
T PRK00192 179 GGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPG 258 (273)
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCC
Confidence 0111111 156666655543 35 899999999999999999999999999999999 776 7887 6788
Q ss_pred chHHHHHHHH
Q 003909 730 FATIVAAVAE 739 (787)
Q Consensus 730 ~~~i~~~i~~ 739 (787)
.+|+++.+++
T Consensus 259 ~~Gv~~~l~~ 268 (273)
T PRK00192 259 PEGWAEAINK 268 (273)
T ss_pred cHHHHHHHHH
Confidence 9999999863
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.19 E-value=1e-10 Score=113.96 Aligned_cols=127 Identities=15% Similarity=0.108 Sum_probs=101.2
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc---ccc-ccccchhhccCChHHHHHhhccceEEE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD---FVG-RSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
++.|++.+.|+.+++.| +++++||.....+..+++++|++....+ ..+ ..++|. .
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~------------------~-- 126 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGY------------------Q-- 126 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECe------------------e--
Confidence 58999999999999985 9999999999999999999999753321 000 111111 0
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHH
Q 003909 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEG 740 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~g 740 (787)
...+..|...++.++..+..++++|||.||++|++.||+||++ ++.+.++++||-...-.+.+.+...+.++
T Consensus 127 ~~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~-~ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 127 LRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred ecCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEe-cCCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 0346789999999988887899999999999999999999999 67788888887777666788888888765
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.8e-11 Score=109.57 Aligned_cols=110 Identities=19% Similarity=0.263 Sum_probs=86.5
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHH
Q 003909 600 AMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVE 679 (787)
Q Consensus 600 ~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 679 (787)
+|++|+++|++++++||++...+..+++++|+...... ....|+-..++++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~-----------------------------~~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG-----------------------------QSNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec-----------------------------ccchHHHHHHHHH
Confidence 89999999999999999999999999999998753200 0011222233333
Q ss_pred HHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchH-HHHHHH
Q 003909 680 ALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFAT-IVAAVA 738 (787)
Q Consensus 680 ~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~-i~~~i~ 738 (787)
.+.-..+.++++||+.||++|++.|+++++|.++.+.++..|++++.++..+| ++++++
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 33334568999999999999999999999999999999999999998776555 777664
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.1e-10 Score=89.30 Aligned_cols=61 Identities=36% Similarity=0.518 Sum_probs=56.8
Q ss_pred HhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 003909 15 FFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFL 75 (787)
Q Consensus 15 ~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (787)
.|++|+..||+++|+.+|+++||+|+++.++.+++|+.++++|++++.+++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4788988999999999999999999999988889999999999999999999999988765
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.8e-10 Score=112.81 Aligned_cols=142 Identities=17% Similarity=0.235 Sum_probs=96.5
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCC--ccccccccc-cch------h----h-------------cc
Q 003909 597 VKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH--LVDFVGRSY-TAS------E----F-------------EE 650 (787)
Q Consensus 597 ~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~-~~~------~----~-------------~~ 650 (787)
..++++ ++++|++++++|||+...+..+.+++++..+ .+..+|..+ ... . . ..
T Consensus 20 ~~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (236)
T TIGR02471 20 FVELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALAD 98 (236)
T ss_pred HHHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHhc
Confidence 336676 6999999999999999999999999998643 343333221 100 0 0 00
Q ss_pred CC--------------------h---H---HHHHhhc----cce-EEE-----ecCh--hhHHHHHHHHhhC----CCEE
Q 003909 651 LP--------------------A---M---QQTVALQ----HMA-LFT-----RVEP--SHKRMLVEALQNQ----NEVV 688 (787)
Q Consensus 651 ~~--------------------~---~---~~~~~~~----~~~-v~~-----~~~p--~~K~~~v~~l~~~----~~~v 688 (787)
+. . . .....+. ... +++ ...| ..|...++.+.++ ...+
T Consensus 99 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~ 178 (236)
T TIGR02471 99 IPGLTLQDDQEQGPFKISYLLDPEGEPILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQI 178 (236)
T ss_pred CCCcEeCChhcCCCeeEEEEECcccchHHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHE
Confidence 00 0 0 0000000 000 111 2222 2677777776543 2368
Q ss_pred EEEcCCccCHHHHhhCCceEecCCccHHHHhhcC----eeccCCCchHHHHHHHH
Q 003909 689 AMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD----MVLADDNFATIVAAVAE 739 (787)
Q Consensus 689 ~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad----~v~~~~~~~~i~~~i~~ 739 (787)
+++||+.||++||+.+++||+|+|+.+.+|+.|| +|+.+++.+|++++|++
T Consensus 179 i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 179 LVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred EEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 8899999999999999999999999999999999 88989999999999864
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.1e-10 Score=111.13 Aligned_cols=119 Identities=18% Similarity=0.209 Sum_probs=92.1
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccc---ccccccchhhccCChHHHHHhhccceEEE
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF---VGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
.++.|++.+.++.++++|++++++||-...-+.++|+++|++....+. .+..++|. +..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~------------------v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR------------------VVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece------------------eee
Confidence 579999999999999999999999999999999999999998754321 01123332 222
Q ss_pred -ecChhhHHHHHHHHhhC-C---CEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCC
Q 003909 668 -RVEPSHKRMLVEALQNQ-N---EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADD 728 (787)
Q Consensus 668 -~~~p~~K~~~v~~l~~~-~---~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~ 728 (787)
.+..+.|...++.+.+. | +.+.++|||.||+|||+.||.++++ |+.+.++..|+......
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~-n~~~~l~~~a~~~~~~~ 202 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV-NPKPKLRALADVRIWPI 202 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe-CcCHHHHHHHHHhcChh
Confidence 24457888888666543 3 3588889999999999999999999 66777888887766543
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.8e-10 Score=99.92 Aligned_cols=113 Identities=20% Similarity=0.343 Sum_probs=90.5
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHH
Q 003909 599 NAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLV 678 (787)
Q Consensus 599 ~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 678 (787)
..|+.|.+.|+++.++|||....++.-|+++||... |. --.+|....
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~-------------------------------~q--G~~dK~~a~ 88 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL-------------------------------YQ--GISDKLAAF 88 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee-------------------------------ee--chHhHHHHH
Confidence 578999999999999999999999999999999762 22 245676666
Q ss_pred HHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCch----HHHHHHHHHHHHH
Q 003909 679 EALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFA----TIVAAVAEGRAIY 744 (787)
Q Consensus 679 ~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~----~i~~~i~~gR~~~ 744 (787)
+.+... .+.|+++||..||+|+|+..|+++|+.++.+.+++.||+|+..+.-. .+.++|..++..+
T Consensus 89 ~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~ 162 (170)
T COG1778 89 EELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKL 162 (170)
T ss_pred HHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcH
Confidence 555443 56899999999999999999999999999999999999999755433 2344454444443
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.2e-09 Score=102.26 Aligned_cols=103 Identities=22% Similarity=0.296 Sum_probs=82.3
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHH
Q 003909 599 NAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLV 678 (787)
Q Consensus 599 ~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 678 (787)
.+|+.|+++|++++++||++...+..+++++|+... |. ..+.|...+
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~-------------------------------f~--g~~~k~~~l 101 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL-------------------------------YQ--GQSNKLIAF 101 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee-------------------------------ec--CCCcHHHHH
Confidence 689999999999999999999999999999998752 21 122344444
Q ss_pred HHH----hhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHH
Q 003909 679 EAL----QNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIV 734 (787)
Q Consensus 679 ~~l----~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~ 734 (787)
+.+ .-..+.+++|||+.||++|++.||++++++++.+..+..||+++..+.-+|..
T Consensus 102 ~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~ 161 (183)
T PRK09484 102 SDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAV 161 (183)
T ss_pred HHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHH
Confidence 333 33346899999999999999999999999998899999999999765544543
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.91 E-value=8.5e-09 Score=105.12 Aligned_cols=150 Identities=17% Similarity=0.176 Sum_probs=103.4
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCC--ccccccccc-cchh-------------------
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH--LVDFVGRSY-TASE------------------- 647 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~-~~~~------------------- 647 (787)
..+..|...+++++++++|+.++++|||+...++.+.+++++..+ .+..+|..+ .+..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 456889999999999999999999999999999999999998765 333222211 1100
Q ss_pred -------hccC-----------------ChHH----H---HHhhc----cceE-EE-----ecCh--hhHHHHHHHHhhC
Q 003909 648 -------FEEL-----------------PAMQ----Q---TVALQ----HMAL-FT-----RVEP--SHKRMLVEALQNQ 684 (787)
Q Consensus 648 -------~~~~-----------------~~~~----~---~~~~~----~~~v-~~-----~~~p--~~K~~~v~~l~~~ 684 (787)
+..+ .... . ...+. ...+ ++ ...| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0000 0000 0 00000 0111 11 2222 3677777777553
Q ss_pred ----CCEEEEEcCCccCHHHHhh-CCceEecCCccHHHHhhcC-------eeccCCCchHHHHHHHH
Q 003909 685 ----NEVVAMTGDGVNDAPALKK-ADIGIAMGSGTAVAKSASD-------MVLADDNFATIVAAVAE 739 (787)
Q Consensus 685 ----~~~v~~vGDg~ND~~ml~~-A~vgia~~~~~~~~~~~ad-------~v~~~~~~~~i~~~i~~ 739 (787)
...|+++||+.||++|++. ++.||+|+|+.+.+|+.++ +++.....+|+++++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 4678999999999999998 6799999999999998654 77888888999998864
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.88 E-value=8.2e-09 Score=103.28 Aligned_cols=126 Identities=22% Similarity=0.302 Sum_probs=92.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccc---ccccccchhhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF---VGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
++.|++.+.++.|+++|++++++||.....+..+.+.+|+.....+. .+..+.+. +...
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~------------------~~~~ 146 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGL------------------VEGP 146 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEE------------------ecCc
Confidence 58999999999999999999999999999999999999997632110 00000000 0000
Q ss_pred -cChhhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHH
Q 003909 669 -VEPSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAA 736 (787)
Q Consensus 669 -~~p~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~ 736 (787)
..+..|..+++.+.+. .+.++++||+.+|++|++.||+++++ ++.+.++++||+++.+.++..+..+
T Consensus 147 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 147 IVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF-NAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe-CCCHHHHHhchhccCCCCHHHHHhh
Confidence 1122355555544332 35688899999999999999999999 5678899999999998887766544
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.7e-08 Score=107.91 Aligned_cols=148 Identities=14% Similarity=0.103 Sum_probs=97.1
Q ss_pred CCChhHHHHH-HHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCc--cccccc-cccchh--------------------
Q 003909 592 PPREEVKNAM-LSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHL--VDFVGR-SYTASE-------------------- 647 (787)
Q Consensus 592 ~~~~~~~~~i-~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~--~~~~~~-~~~~~~-------------------- 647 (787)
.+.+....++ ++++++|+.++++|||++..+..+.+++++..+. +..+|. ++.+..
T Consensus 28 ~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 28 NLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred chhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 4555556666 8899999999999999999999999999987662 211111 100000
Q ss_pred ---hccC--------------------ChH---H----HHHhhc----cce------EEEecCh--hhHHHHHHHHhhC-
Q 003909 648 ---FEEL--------------------PAM---Q----QTVALQ----HMA------LFTRVEP--SHKRMLVEALQNQ- 684 (787)
Q Consensus 648 ---~~~~--------------------~~~---~----~~~~~~----~~~------v~~~~~p--~~K~~~v~~l~~~- 684 (787)
...+ ... . +...+. ... -+....| ..|...++.+.+.
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~ 187 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKL 187 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHh
Confidence 0000 000 0 001110 011 1223333 3588888777544
Q ss_pred ------CCEEEEEcCCccCHHHHhhCC-ceEecCCccHHHHhhc--------Ceec-cCCCchHHHHHHHH
Q 003909 685 ------NEVVAMTGDGVNDAPALKKAD-IGIAMGSGTAVAKSAS--------DMVL-ADDNFATIVAAVAE 739 (787)
Q Consensus 685 ------~~~v~~vGDg~ND~~ml~~A~-vgia~~~~~~~~~~~a--------d~v~-~~~~~~~i~~~i~~ 739 (787)
.+.++++||+.||++||+.|+ .||||+|+.+.+|+.+ ++++ .+++.+||.+++++
T Consensus 188 ~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 188 KAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 357899999999999999999 7999999999999854 4442 46678999999864
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.9e-08 Score=97.26 Aligned_cols=51 Identities=12% Similarity=0.158 Sum_probs=43.8
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccc
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~ 640 (787)
.+...++++++|++|+++|++++++|||++..+..+.+++|+..+.+..+|
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NG 63 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENG 63 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCC
Confidence 456677899999999999999999999999999999999998765554433
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.66 E-value=2.1e-07 Score=93.13 Aligned_cols=48 Identities=21% Similarity=0.237 Sum_probs=41.2
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCC-CCcccccc
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF-DHLVDFVG 640 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~-~~~~~~~~ 640 (787)
..+.++++|++|+++|++++++|||+...+..+++.+|+. .+.++.+|
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NG 65 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENG 65 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCC
Confidence 4555999999999999999999999999999999999987 45554444
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.7e-07 Score=92.61 Aligned_cols=125 Identities=18% Similarity=0.220 Sum_probs=88.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEE--ec
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT--RV 669 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~ 669 (787)
++.|++.+.++.|+++ ++++++|+.....+..+.+++|+....... ....... .+.. ..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~--~~~~~~~----------------~i~~~~~~ 128 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHS--LEVDEDG----------------MITGYDLR 128 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcce--EEECCCC----------------eEECcccc
Confidence 4689999999999999 999999999999999999999987532110 0000000 0000 02
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCe-eccCCCchHHHHHH
Q 003909 670 EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM-VLADDNFATIVAAV 737 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~-v~~~~~~~~i~~~i 737 (787)
.|..|...++.++..++.+++||||.||++|.+.||+|++.+.........+++ ++. ++..+...+
T Consensus 129 ~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~~--~~~el~~~l 195 (205)
T PRK13582 129 QPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAVH--TYDELLAAI 195 (205)
T ss_pred ccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCcccccC--CHHHHHHHH
Confidence 367788888888888889999999999999999999999986544444445565 332 355554444
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.59 E-value=8.5e-08 Score=87.48 Aligned_cols=103 Identities=17% Similarity=0.265 Sum_probs=77.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc-------cchhhccCChHHHHHhhccce
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-------TASEFEELPAMQQTVALQHMA 664 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 664 (787)
.+.|++++.++.|+++|.+++++||.-...+.++|.++||+...+..+...+ ..++....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~pt------------- 154 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPT------------- 154 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCcc-------------
Confidence 4789999999999999999999999999999999999999874332111111 11111111
Q ss_pred EEEecChhhHHHHHHHHhhC--CCEEEEEcCCccCHHHHhhCCceEecC
Q 003909 665 LFTRVEPSHKRMLVEALQNQ--NEVVAMTGDGVNDAPALKKADIGIAMG 711 (787)
Q Consensus 665 v~~~~~p~~K~~~v~~l~~~--~~~v~~vGDg~ND~~ml~~A~vgia~~ 711 (787)
.....|.+.+..+++. -..++|||||.||++|+..|+.=++.+
T Consensus 155 ----sdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 155 ----SDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ----ccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 2234788888888764 458899999999999999987777765
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.3e-07 Score=91.47 Aligned_cols=117 Identities=21% Similarity=0.208 Sum_probs=80.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|++++++|+.....+..+++.+|+...... .....+ ..... ...+....+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~---~~~~~~-~g~~~----------p~~~~~~~~ 145 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSN---ELVFDE-KGFIQ----------PDGIVRVTF 145 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEE---EEEEcC-CCeEe----------cceeeEEcc
Confidence 5899999999999999999999999999999999999998643211 000000 00000 001111334
Q ss_pred hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcC
Q 003909 672 SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD 722 (787)
Q Consensus 672 ~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad 722 (787)
..|...++.+.+. .+.++++||+.||++|++.||++++++......+.++|
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 5566666555332 45689999999999999999999999755544554444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.5e-07 Score=90.98 Aligned_cols=54 Identities=22% Similarity=0.294 Sum_probs=45.1
Q ss_pred hhHHHHHHHHhhCCCEEEEEcC----CccCHHHHhhC-CceEecCCccHHHHhhcCeec
Q 003909 672 SHKRMLVEALQNQNEVVAMTGD----GVNDAPALKKA-DIGIAMGSGTAVAKSASDMVL 725 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGD----g~ND~~ml~~A-~vgia~~~~~~~~~~~ad~v~ 725 (787)
-.|...++.+.+..+.|++||| |.||++||+.| -.|++++|+.+.+|..+.++.
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 3688888888777789999999 99999999976 467777799999999876654
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.4e-06 Score=87.22 Aligned_cols=51 Identities=10% Similarity=0.135 Sum_probs=44.8
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccc
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~ 640 (787)
++...+.++++|++|+++||.|+++|||....+..+.+++|+..+.+..+|
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNG 66 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDG 66 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCC
Confidence 445788899999999999999999999999999999999999876655444
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.9e-06 Score=96.09 Aligned_cols=46 Identities=7% Similarity=0.113 Sum_probs=40.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD 637 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~ 637 (787)
...+.++++|++|+++|+.++++|||+...+..+++++|+..+.+.
T Consensus 433 ~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~ 478 (694)
T PRK14502 433 YSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFIT 478 (694)
T ss_pred ccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEE
Confidence 3667899999999999999999999999999999999998654443
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.1e-06 Score=87.86 Aligned_cols=139 Identities=13% Similarity=0.237 Sum_probs=88.1
Q ss_pred CCChhHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc---ch-hhccCC--------------
Q 003909 592 PPREEVKNAMLSCMT-AGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT---AS-EFEELP-------------- 652 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~-~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~---~~-~~~~~~-------------- 652 (787)
.+.++++++|++|++ .|++++++|||+...+..+++.+++. ....+|..+. +. ....+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~--~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~ 113 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFP--LAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTA 113 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccce--EEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHH
Confidence 678999999999998 79999999999999999988777642 1111111000 00 000000
Q ss_pred --------------------------hHHHHH---hhc----cce-----EEEecCh--hhHHHHHHHHhhC----CCEE
Q 003909 653 --------------------------AMQQTV---ALQ----HMA-----LFTRVEP--SHKRMLVEALQNQ----NEVV 688 (787)
Q Consensus 653 --------------------------~~~~~~---~~~----~~~-----v~~~~~p--~~K~~~v~~l~~~----~~~v 688 (787)
.+.... .+. ... -+.+..| ..|...++.+.+. ...+
T Consensus 114 ~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v 193 (266)
T PRK10187 114 LAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTP 193 (266)
T ss_pred hccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 000000 000 000 1122223 3677777766543 3578
Q ss_pred EEEcCCccCHHHHhhC----CceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 689 AMTGDGVNDAPALKKA----DIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 689 ~~vGDg~ND~~ml~~A----~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
+++||+.||.+||+.+ ++||+||++.+ .|++.+. +.+.|..++.
T Consensus 194 ~~~GD~~nD~~mf~~~~~~~g~~vavg~a~~----~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 194 VFVGDDLTDEAGFAVVNRLGGISVKVGTGAT----QASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EEEcCCccHHHHHHHHHhcCCeEEEECCCCC----cCeEeCC--CHHHHHHHHH
Confidence 9999999999999999 99999998753 4677775 4777777764
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.37 E-value=3.4e-06 Score=83.83 Aligned_cols=111 Identities=18% Similarity=0.141 Sum_probs=77.4
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEE---E
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF---T 667 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~ 667 (787)
-+++|++.+.++.|++.|++++++||.....+..+.+.++...... .+...+.+..+...... ...+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~-~n~~~~~~~~~~~~~p~--------~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIY-CNEADFSNEYIHIDWPH--------PCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEE-eceeEeeCCeeEEeCCC--------CCcccccc
Confidence 4689999999999999999999999999999999998875433211 11111122111100000 0000 0
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC
Q 003909 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG 711 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~ 711 (787)
.+ ...|..+++.++...+.++++|||.||++|++.||+.+|-+
T Consensus 140 ~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 140 QC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred CC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 11 24688999988877888999999999999999999988765
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.8e-06 Score=84.30 Aligned_cols=126 Identities=17% Similarity=0.258 Sum_probs=81.2
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCC-cccc----c-cccccchhhccCChHHHHHhhccceE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH-LVDF----V-GRSYTASEFEELPAMQQTVALQHMAL 665 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~-~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~v 665 (787)
++.|++.+.++.|+++|++++++||.....+..+++.+|+... .... . ...+.+..... .
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~--------------~ 149 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENE--------------P 149 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCC--------------c
Confidence 4789999999999999999999999999999999999999731 1100 0 00000000000 0
Q ss_pred EEecChhhHHHHHHHHhhC--CCEEEEEcCCccCHHHHhhC--CceEecCCc--cHHHHhhcCeeccCCCchHHHH
Q 003909 666 FTRVEPSHKRMLVEALQNQ--NEVVAMTGDGVNDAPALKKA--DIGIAMGSG--TAVAKSASDMVLADDNFATIVA 735 (787)
Q Consensus 666 ~~~~~p~~K~~~v~~l~~~--~~~v~~vGDg~ND~~ml~~A--~vgia~~~~--~~~~~~~ad~v~~~~~~~~i~~ 735 (787)
......|.+.++.+... .+.++++||+.||+.|.+.+ +++++.+.. .+.....+|+++.+ +..+..
T Consensus 150 --~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~ 221 (224)
T PLN02954 150 --TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIE 221 (224)
T ss_pred --ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHH
Confidence 01123466666665543 35788999999999998884 444555422 24445568998854 444443
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.26 E-value=5.3e-06 Score=82.73 Aligned_cols=126 Identities=22% Similarity=0.320 Sum_probs=91.9
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEec
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRV 669 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 669 (787)
...+-|++++++..|+++|++..++|+++...+..+.+.+|+..+.... +.++.... ..-
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i----~g~~~~~~----------------~KP 146 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVI----VGGDDVPP----------------PKP 146 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceE----EcCCCCCC----------------CCc
Confidence 4568899999999999999999999999999999999999998765221 11111100 013
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCC---ceEecCC--ccHHHHhhcCeeccCCCchHHHHHH
Q 003909 670 EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKAD---IGIAMGS--GTAVAKSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~---vgia~~~--~~~~~~~~ad~v~~~~~~~~i~~~i 737 (787)
.|.....+++.+....+.++||||+.+|+.|-+.|| +||..|. ........+|+++.+ +..+...+
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred CHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 455566666766666558999999999999999999 5666663 344555568998865 55555444
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.26 E-value=3.8e-06 Score=82.81 Aligned_cols=105 Identities=12% Similarity=0.088 Sum_probs=76.9
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc---c-ccccccchhhccCChHHHHHhhccceE
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD---F-VGRSYTASEFEELPAMQQTVALQHMAL 665 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~v 665 (787)
..++.|++.+.++.++++|++++++||.....+..+++.+|++..... . .+..++|....
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~---------------- 148 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDG---------------- 148 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccC----------------
Confidence 346899999999999999999999999999999999999999753211 0 01111111000
Q ss_pred EEecChhhHHHHHHHHhh-C---CCEEEEEcCCccCHHHHhhCCceEecC
Q 003909 666 FTRVEPSHKRMLVEALQN-Q---NEVVAMTGDGVNDAPALKKADIGIAMG 711 (787)
Q Consensus 666 ~~~~~p~~K~~~v~~l~~-~---~~~v~~vGDg~ND~~ml~~A~vgia~~ 711 (787)
-.+.++.|...++.+.. . .+.++++||+.+|++|++.||.++++.
T Consensus 149 -~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 149 -NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred -CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 01334677777765543 2 336888999999999999999999986
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.26 E-value=5.2e-06 Score=82.82 Aligned_cols=109 Identities=17% Similarity=0.140 Sum_probs=74.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceE--E-Ee
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMAL--F-TR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~-~~ 668 (787)
+++|++.+.++.|+++|+++.++||.....+..+.+++ +.......+...+.+.....-... ... + ..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~--------p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPH--------PCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccC--------Ccccccccc
Confidence 68999999999999999999999999999999999988 643211111111122111000000 000 0 00
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec
Q 003909 669 VEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM 710 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~ 710 (787)
+ ...|..+++.++.....++++|||.||++|.+.||+.++-
T Consensus 145 ~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 145 C-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred C-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 1 1247888888887777899999999999999999997773
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.25 E-value=2.6e-06 Score=83.22 Aligned_cols=92 Identities=23% Similarity=0.311 Sum_probs=68.6
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChh--
Q 003909 595 EEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPS-- 672 (787)
Q Consensus 595 ~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~-- 672 (787)
+++.+.|+.++++|++++|+||.....+.++++.+|++...+..... .... ......+.++.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~-~~~~---------------~~~~~~~~~~~~~ 155 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL-FDNG---------------GGIFTGRITGSNC 155 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE-ECTT---------------CCEEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee-eecc---------------cceeeeeECCCCC
Confidence 88889999999999999999999999999999999998632111111 0000 01123333333
Q ss_pred -hHHHHHHHH------hhCCCEEEEEcCCccCHHHHh
Q 003909 673 -HKRMLVEAL------QNQNEVVAMTGDGVNDAPALK 702 (787)
Q Consensus 673 -~K~~~v~~l------~~~~~~v~~vGDg~ND~~ml~ 702 (787)
.|...++.+ +.....++++|||.||++|||
T Consensus 156 ~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 156 GGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp SHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 499999999 455789999999999999996
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=7.8e-06 Score=82.16 Aligned_cols=127 Identities=21% Similarity=0.292 Sum_probs=88.9
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.++.|++.++++.|++.|++++++||........+.+.+|+..... .++........ ...
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~----------------kp~ 151 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS----VVIGGDSLPNK----------------KPD 151 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc----EEEcCCCCCCC----------------CcC
Confidence 4688999999999999999999999999999999999999865421 11111111000 012
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCC----ccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGS----GTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~----~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
|+--..+++.++...+.++++||+.+|+.|.+.||+ +|.+.. ..+.....+++++ +++..+..++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 333345556666667789999999999999999999 555532 2334445688887 457777776654
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.7e-06 Score=80.96 Aligned_cols=97 Identities=24% Similarity=0.291 Sum_probs=69.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc---c-ccccccchhhccCChHHHHHhhccceEEE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD---F-VGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
+++|++.+.++.++++|++++++||.....+..+++.+|+.....+ . .+..+.+..... .
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~----------------~ 136 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQ----------------V 136 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCc----------------c
Confidence 3679999999999999999999999999999999999998743211 0 000111110000 0
Q ss_pred ecChhhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhC
Q 003909 668 RVEPSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKA 704 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A 704 (787)
...+..|...++.+... .+.++++|||.||++|++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 13456788888776543 45789999999999999876
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.14 E-value=7.5e-06 Score=79.63 Aligned_cols=114 Identities=20% Similarity=0.213 Sum_probs=75.6
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEE-ec
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT-RV 669 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~ 669 (787)
-++.|++.+.++.|++.|++++++|+.....+..+.+..|+...... ++..+....-. ............+. ..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~----i~~~~~~~~~~-g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIE----IYSNPASFDND-GRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeE----EeccCceECCC-CcEEEecCCCCccCcCC
Confidence 36889999999999999999999999999999999999998653211 11111000000 00000000000000 01
Q ss_pred ChhhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceEe
Q 003909 670 EPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
....|..+++.++.. .+.++++|||.||+.|.+.||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123588899988877 8889999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.3e-05 Score=79.21 Aligned_cols=123 Identities=18% Similarity=0.240 Sum_probs=84.0
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.+++|+++|++++++|+.....+....+.+|+...... ++..++.. ..+-.|
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~----i~~~~~~~----------------~~KP~~ 134 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDH----VIGSDEVP----------------RPKPAP 134 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheee----EEecCcCC----------------CCCCCh
Confidence 6889999999999999999999999999999999999998653211 11111000 001223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe-c--C--CccHHHHhhcCeeccCCCchHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-M--G--SGTAVAKSASDMVLADDNFATIVAA 736 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia-~--~--~~~~~~~~~ad~v~~~~~~~~i~~~ 736 (787)
+--..+++.++-..+.+++|||+.+|+.+-+.||+... + | +..+..+..+|+++.+ +..+..+
T Consensus 135 ~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~ 202 (205)
T TIGR01454 135 DIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLAL 202 (205)
T ss_pred HHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHH
Confidence 33344555555556789999999999999999999643 3 2 2233445678888744 5455443
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.1e-05 Score=73.58 Aligned_cols=118 Identities=19% Similarity=0.111 Sum_probs=74.7
Q ss_pred ccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEE
Q 003909 588 GMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 588 ~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
....++.+++.+.+++|+++|++++++||+....+...++.+|+...... ++......................+.
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDP----VITSNGAAIYYPKEGLFLGGGPFDIG 95 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhh----eeccchhhhhcccccccccccccccC
Confidence 34458999999999999999999999999999999999999998432110 11000000000000000000111222
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEe
Q 003909 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIA 709 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia 709 (787)
+..+..+..+.+.+....+.++++||+.+|+.|++.+++ +|+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 96 KPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 344555566666665556789999999999999999543 444
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.5e-05 Score=77.05 Aligned_cols=40 Identities=20% Similarity=0.322 Sum_probs=36.9
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIG 630 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~g 630 (787)
.++.+++.++|++|+++|++++++|||....+..+.+.++
T Consensus 16 ~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 16 HELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 3588999999999999999999999999999999998854
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=4.7e-05 Score=75.38 Aligned_cols=110 Identities=15% Similarity=0.113 Sum_probs=75.8
Q ss_pred CCChhHHHHH-HHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCC--CccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAM-LSCMTAGIRVIVVTGDNKSTAESICHKIGAFD--HLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i-~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
.+.|++.+.| +.+++.|++++++|+.+...+..+++.+|+.. ..+ +.+++.. ......-..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i--------~t~l~~~--------~tg~~~g~~ 158 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLI--------ASQMQRR--------YGGWVLTLR 158 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceE--------EEEEEEE--------EccEECCcc
Confidence 4589999999 57888999999999999999999999999621 111 1111000 000000112
Q ss_pred cChhhHHHHHHHH-hhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHH
Q 003909 669 VEPSHKRMLVEAL-QNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAK 718 (787)
Q Consensus 669 ~~p~~K~~~v~~l-~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~ 718 (787)
|..++|...++.. ........+-||+.||+|||+.|+.+++++ .++..+
T Consensus 159 c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn-p~~~l~ 208 (211)
T PRK11590 159 CLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT-PRGELQ 208 (211)
T ss_pred CCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC-ccHHhh
Confidence 6668898877654 334445567799999999999999999994 444443
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.94 E-value=3e-05 Score=78.49 Aligned_cols=68 Identities=21% Similarity=0.271 Sum_probs=48.7
Q ss_pred hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHH-----HHhhcC----eeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAV-----AKSASD----MVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~-----~~~~ad----~v~~~~~~~~i~~~i~ 738 (787)
..|...++.++.. .+.|+++||+.||.+||..++.||.++|+.++ ..+..+ |....+.-.||.+.++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4788888888765 34677789999999999999999999999988 332222 4556667788888875
Q ss_pred H
Q 003909 739 E 739 (787)
Q Consensus 739 ~ 739 (787)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 4
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.92 E-value=3.8e-05 Score=76.35 Aligned_cols=116 Identities=16% Similarity=0.165 Sum_probs=78.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|+++|++++++|+.+...+..+.+.+|+..... .++..+.... ....|
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~----------------~Kp~p 144 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFS----VLIGGDSLAQ----------------RKPHP 144 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCc----EEEecCCCCC----------------CCCCh
Confidence 588999999999999999999999999999999999999865421 1111111000 01123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe-c--CC-c-cHHHHhhcCeeccC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-M--GS-G-TAVAKSASDMVLAD 727 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia-~--~~-~-~~~~~~~ad~v~~~ 727 (787)
+-=..+++.+....+.+++|||+.+|+.+.+.||+... + |. . .+.....+|+++.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~ 205 (213)
T TIGR01449 145 DPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS 205 (213)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC
Confidence 32344455555556779999999999999999999654 4 21 1 12223457887743
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.92 E-value=8.2e-05 Score=82.10 Aligned_cols=98 Identities=19% Similarity=0.340 Sum_probs=73.0
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
+++|++.+.+++++++|++++++|+.+...+..+++.+|+.+.. +..+.. .++.|
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~V-------igsd~~------------------~~~kg 126 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDGV-------FASDGT------------------TNLKG 126 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCEE-------EeCCCc------------------cccCC
Confidence 47899999999999999999999999999999999999983321 111100 12445
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTA 715 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~ 715 (787)
+.|.+.+...... +.+.++||+.+|++|++.|+-.++++.+..
T Consensus 127 ~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~ 169 (479)
T PRK08238 127 AAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPG 169 (479)
T ss_pred chHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHH
Confidence 6666655433222 225677999999999999999999975443
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=5.3e-05 Score=78.11 Aligned_cols=126 Identities=12% Similarity=0.207 Sum_probs=84.3
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.++.|++.++|+.|+++|++++++|+.+...+..+.++.|+..... .++.++.... ....
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~----~i~~~d~~~~----------------~Kp~ 159 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFR----WIIGGDTLPQ----------------KKPD 159 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCe----EEEecCCCCC----------------CCCC
Confidence 4678999999999999999999999999999999999988865321 1111111000 0011
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCC----ccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGS----GTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~----~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
|+--..+++.+.-..+.+++|||+.||+.|.+.||+ .+++.. ..+.....+|+++. ++..+.+++.
T Consensus 160 p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~~ 230 (272)
T PRK13223 160 PAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGCA 230 (272)
T ss_pred cHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHHh
Confidence 222234445454456789999999999999999998 344432 22233457888884 4666665543
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=5.7e-05 Score=75.16 Aligned_cols=124 Identities=21% Similarity=0.222 Sum_probs=83.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+..+.. .++..+.... ....|
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~----~i~~~~~~~~----------------~Kp~p 141 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFD----VVITLDDVEH----------------AKPDP 141 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhcee----EEEecCcCCC----------------CCCCc
Confidence 478999999999999999999999999999999999999876431 1111111100 01223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-ec--CC-ccHHH-HhhcCeeccCCCchHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AM--GS-GTAVA-KSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi-a~--~~-~~~~~-~~~ad~v~~~~~~~~i~~~i 737 (787)
+--..+++.+......+++|||+.+|+.+-+.||+-. ++ +. ..+.. ...+|+++. ++..+..++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 142 EPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 3334555555555678899999999999999999943 23 31 22223 345788765 366665554
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.88 E-value=8.3e-05 Score=73.19 Aligned_cols=111 Identities=14% Similarity=0.085 Sum_probs=74.9
Q ss_pred CCChhHHHHHH-HHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAML-SCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~-~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.+.|++.+.|+ .++++|++++++|+-+...+..+++..++.... .++ +.+++.... ....=..|.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-----~~i-~t~le~~~g--------g~~~g~~c~ 159 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-----NLI-ASQIERGNG--------GWVLPLRCL 159 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-----cEE-EEEeEEeCC--------ceEcCccCC
Confidence 47899999996 788899999999999999999999986653211 001 111110000 000011256
Q ss_pred hhhHHHHHHHHh-hCCCEEEEEcCCccCHHHHhhCCceEecCCccHHH
Q 003909 671 PSHKRMLVEALQ-NQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVA 717 (787)
Q Consensus 671 p~~K~~~v~~l~-~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~ 717 (787)
.++|...++..- .......+-||+.||.|||+.||.+++++ .++..
T Consensus 160 g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn-p~~~L 206 (210)
T TIGR01545 160 GHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS-KRGEL 206 (210)
T ss_pred ChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC-cchHh
Confidence 688988776543 23345567799999999999999999994 44443
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=6.7e-05 Score=75.11 Aligned_cols=117 Identities=15% Similarity=0.149 Sum_probs=78.4
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
-++.|++.++++.|+++|++++++|+.....+..+.+++|+...... ++..+... .....
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~----~~~~~~~~----------------~~Kp~ 150 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA----LASAEKLP----------------YSKPH 150 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE----EEEcccCC----------------CCCCC
Confidence 46789999999999999999999999999999999999998765311 11111110 00122
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec-CCc---cHHHHhhcCeeccC
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM-GSG---TAVAKSASDMVLAD 727 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~-~~~---~~~~~~~ad~v~~~ 727 (787)
|+-=..+.+.+.-..+.+++|||+.||+.+.+.||+.... ..+ .+.....+|+++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~ 211 (222)
T PRK10826 151 PEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES 211 (222)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC
Confidence 3322333444444456799999999999999999986543 222 22223356776643
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00016 Score=73.64 Aligned_cols=119 Identities=16% Similarity=0.165 Sum_probs=83.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+..+.. .++.+++...- .-.|
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----~iv~~~~~~~~----------------KP~p 167 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQ----AVIIGSECEHA----------------KPHP 167 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCc----EEEecCcCCCC----------------CCCh
Confidence 578899999999999999999999999999999999999876431 12222211110 1233
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe-cC--CccHHH-HhhcCeeccCCCc
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-MG--SGTAVA-KSASDMVLADDNF 730 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia-~~--~~~~~~-~~~ad~v~~~~~~ 730 (787)
+--..+++.+....+.+++|||+.+|+.+-+.||+-.. +. ...+.. ...+|+++.+-..
T Consensus 168 ~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 168 DPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred HHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 44455556665566789999999999999999999543 42 222222 3468888865443
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00031 Score=70.96 Aligned_cols=129 Identities=13% Similarity=0.167 Sum_probs=82.7
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccc--------ccccccchhhccCChHHHHHhhcc
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF--------VGRSYTASEFEELPAMQQTVALQH 662 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 662 (787)
-+++|++.+.++.|+++|+++.++||.....+..+.+++|+....... .+..+.|.. ..+
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~-~P~----------- 187 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK-GPL----------- 187 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC-CCc-----------
Confidence 468999999999999999999999999999999999999986433211 111222210 000
Q ss_pred ceEEEecChhhHHHHHH-----HHh--hCCCEEEEEcCCccCHHHHhhC---CceEecC--Cc-----cHHHHhhcCeec
Q 003909 663 MALFTRVEPSHKRMLVE-----ALQ--NQNEVVAMTGDGVNDAPALKKA---DIGIAMG--SG-----TAVAKSASDMVL 725 (787)
Q Consensus 663 ~~v~~~~~p~~K~~~v~-----~l~--~~~~~v~~vGDg~ND~~ml~~A---~vgia~~--~~-----~~~~~~~ad~v~ 725 (787)
.....|.+.+. .+. .....|+++|||.||+.|..-. .--+.+| |. -+.-+++-|+|+
T Consensus 188 ------i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl 261 (277)
T TIGR01544 188 ------IHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 261 (277)
T ss_pred ------ccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEE
Confidence 11123444332 222 2346788999999999996544 1233333 32 233456789999
Q ss_pred cCCCchHHHHHH
Q 003909 726 ADDNFATIVAAV 737 (787)
Q Consensus 726 ~~~~~~~i~~~i 737 (787)
.++.--.++..|
T Consensus 262 ~~D~t~~v~~~i 273 (277)
T TIGR01544 262 VQDETLEVANSI 273 (277)
T ss_pred ECCCCchHHHHH
Confidence 877655565544
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00022 Score=71.69 Aligned_cols=122 Identities=16% Similarity=0.073 Sum_probs=83.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+..... .++.++.... ..-.|
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~----~i~~~~~~~~----------------~KP~p 154 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA----VLIGGDTLAE----------------RKPHP 154 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc----EEEecCcCCC----------------CCCCH
Confidence 578999999999999999999999999998888889998865321 1111111000 01234
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-ecCCc----c-HHHHhhcCeeccCCCchHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AMGSG----T-AVAKSASDMVLADDNFATIVA 735 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi-a~~~~----~-~~~~~~ad~v~~~~~~~~i~~ 735 (787)
+--..+++.+.-..+.+++|||+.+|+.|-+.||+.. ++..+ . ......+|+++.+ +..+..
T Consensus 155 ~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~ 222 (229)
T PRK13226 155 LPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWN 222 (229)
T ss_pred HHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHH
Confidence 4445666667666788999999999999999999964 33211 1 2223458888854 444433
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00026 Score=83.58 Aligned_cols=151 Identities=20% Similarity=0.301 Sum_probs=91.4
Q ss_pred CcEEEEEecc--CCCCChhHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc--chhhccC---
Q 003909 580 DLTFIGLVGM--LDPPREEVKNAMLSCMT-AGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT--ASEFEEL--- 651 (787)
Q Consensus 580 ~l~~lG~i~~--~d~~~~~~~~~i~~l~~-~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~--~~~~~~~--- 651 (787)
|++++..-.- ...+.+++.++|++|.+ .|+.|+++|||+..........+++. .+..+|..+. +......
T Consensus 500 DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~--liaenG~~i~~~~~~w~~~~~~ 577 (726)
T PRK14501 500 DGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIH--LVAEHGAWSRAPGGEWQLLEPV 577 (726)
T ss_pred CccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeE--EEEeCCEEEeCCCCceEECCCc
Confidence 5555543211 12478999999999999 59999999999999998877665531 1111111100 0000000
Q ss_pred --------------------------------------ChH-------HHHHhh----cc--ceE-----EEecCh--hh
Q 003909 652 --------------------------------------PAM-------QQTVAL----QH--MAL-----FTRVEP--SH 673 (787)
Q Consensus 652 --------------------------------------~~~-------~~~~~~----~~--~~v-----~~~~~p--~~ 673 (787)
..+ +....+ .. ..+ +.+..| -+
T Consensus 578 ~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vn 657 (726)
T PRK14501 578 ATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVN 657 (726)
T ss_pred chhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCC
Confidence 000 000000 00 001 112222 36
Q ss_pred HHHHHHHHhhC--CCEEEEEcCCccCHHHHhhC---CceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 674 KRMLVEALQNQ--NEVVAMTGDGVNDAPALKKA---DIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 674 K~~~v~~l~~~--~~~v~~vGDg~ND~~ml~~A---~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
|...++.+.+. ...++++||+.||.+||+.+ +++|+||++ +.+|++.+.++ +.|..+++
T Consensus 658 KG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 658 KGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHHH
Confidence 77777777653 35899999999999999986 689999875 46789999764 55777664
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00034 Score=71.87 Aligned_cols=121 Identities=12% Similarity=0.113 Sum_probs=81.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+..+... ++.++... ..|
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~----vi~~~~~~-------------------~k~ 198 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSV----VQAGTPIL-------------------SKR 198 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEE----EEecCCCC-------------------CCH
Confidence 5789999999999999999999999999999999999998764311 11111000 012
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe-cCC---ccHHH-HhhcCeeccCCCchHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-MGS---GTAVA-KSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia-~~~---~~~~~-~~~ad~v~~~~~~~~i~~~i 737 (787)
+.-..+++.+....+.+++|||+.+|+.+-+.||+-.. +.. ..+.. ...+|+++.+ +..+..++
T Consensus 199 ~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~--~~eL~~~~ 267 (273)
T PRK13225 199 RALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLET--PSDLLQAV 267 (273)
T ss_pred HHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECC--HHHHHHHH
Confidence 21223333444445679999999999999999999543 322 22223 3458988744 66665544
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00031 Score=71.89 Aligned_cols=98 Identities=15% Similarity=0.097 Sum_probs=69.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.....+..+.+++|+..... ..++..++... ..-.|
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~---d~ii~~~~~~~----------------~KP~p 159 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP---DYNVTTDDVPA----------------GRPAP 159 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC---ceEEccccCCC----------------CCCCH
Confidence 467899999999999999999999999999999999999876421 11122211110 01223
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceE
Q 003909 672 SHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 672 ~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
+-=...++.+.-. .+.+++|||+.+|+.+-+.||+..
T Consensus 160 ~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 160 WMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeE
Confidence 3334455555542 567999999999999999999843
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00023 Score=72.55 Aligned_cols=116 Identities=15% Similarity=0.120 Sum_probs=80.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+..+.. .++.+.+... ..-.|
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----~ii~~~d~~~----------------~KP~P 168 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFS----VVLAAEDVYR----------------GKPDP 168 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCc----EEEecccCCC----------------CCCCH
Confidence 568999999999999999999999999999999999999876431 1222221110 01223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-ecC-CccHHHHhhcCeeccC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AMG-SGTAVAKSASDMVLAD 727 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi-a~~-~~~~~~~~~ad~v~~~ 727 (787)
+-=...++.+.-..+.+++|||+.+|+.+-+.||+-. ++. .........+|+++.+
T Consensus 169 e~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 169 EMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC
Confidence 3334555666656678999999999999999999943 443 2223233357887654
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00029 Score=70.38 Aligned_cols=98 Identities=28% Similarity=0.282 Sum_probs=70.7
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCC--CCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF--DHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
.++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+. ... ..++...+... .+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f----~~i~~~~~~~~----------------~K 145 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV----DAVVCPSDVAA----------------GR 145 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC----CEEEcCCcCCC----------------CC
Confidence 378999999999999999999999999999999999999987 432 11122111100 01
Q ss_pred cChhhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCceE
Q 003909 669 VEPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
-.|+-=...++.+.-. .+.+++|||+.+|+.+-+.||+..
T Consensus 146 P~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred CCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 2233323444444433 468999999999999999999986
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00054 Score=72.69 Aligned_cols=116 Identities=17% Similarity=0.145 Sum_probs=81.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+..+.. .++..++...- .-.|
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd----~Iv~sddv~~~----------------KP~P 275 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFS----VIVAAEDVYRG----------------KPDP 275 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHce----EEEecCcCCCC----------------CCCH
Confidence 477999999999999999999999999999999999999876431 12222111100 1223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-ecCCccHH-HHhhcCeeccC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AMGSGTAV-AKSASDMVLAD 727 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi-a~~~~~~~-~~~~ad~v~~~ 727 (787)
+-=...++.+.-..+.+++|||+.+|+.+-+.||+-. ++.++.+. -...||+++.+
T Consensus 276 eifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s 333 (381)
T PLN02575 276 EMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRR 333 (381)
T ss_pred HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECC
Confidence 3344566666666788999999999999999999944 34433222 12347887754
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.001 Score=68.53 Aligned_cols=96 Identities=15% Similarity=0.061 Sum_probs=66.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++|+.|+++|+++.++||.....+..+.+.+|+..... ..++..++... ..-.|
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~---d~i~~~~~~~~----------------~KP~p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP---DHVVTTDDVPA----------------GRPYP 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc---eEEEcCCcCCC----------------CCCCh
Confidence 567899999999999999999999999999888888887755321 11111111100 01223
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCc
Q 003909 672 SHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADI 706 (787)
Q Consensus 672 ~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A~v 706 (787)
+-=...++.+.-. .+.+++|||+.+|+.+-+.||+
T Consensus 162 ~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 162 WMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 3333444444433 3679999999999999999998
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00037 Score=69.25 Aligned_cols=88 Identities=19% Similarity=0.324 Sum_probs=63.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCC----HHHHHHHHHHhCC--CCCccccccccccchhhccCChHHHHHhhccceE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDN----KSTAESICHKIGA--FDHLVDFVGRSYTASEFEELPAMQQTVALQHMAL 665 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~----~~~a~~~a~~~gi--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 665 (787)
.+.+++++.++.|+++|+++.++|||. ..++..+.+.+|+ .... .. +
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f----~v-----------------------i 166 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMN----PV-----------------------I 166 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccce----eE-----------------------E
Confidence 477889999999999999999999985 4578888888999 3321 11 2
Q ss_pred EEecCh--hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEec
Q 003909 666 FTRVEP--SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAM 710 (787)
Q Consensus 666 ~~~~~p--~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~ 710 (787)
++..+. ..|...+ ++.+ .++++||..+|+.+-+.||+ +|.+
T Consensus 167 l~gd~~~K~~K~~~l---~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 167 FAGDKPGQYTKTQWL---KKKN-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred EcCCCCCCCCHHHHH---HhcC-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 221111 2344433 3444 47889999999999999998 4444
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0011 Score=61.69 Aligned_cols=103 Identities=16% Similarity=0.164 Sum_probs=66.2
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHH---HHHHHh---C--CCC-CccccccccccchhhccCChHHHHHhh
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE---SICHKI---G--AFD-HLVDFVGRSYTASEFEELPAMQQTVAL 660 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~---~~a~~~---g--i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (787)
++.+.+++++++++++++|++++++|||+...+. ...+++ | +.. +....++.... .+..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~-----~~~~e------ 93 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFA-----ALHRE------ 93 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchh-----hhhcc------
Confidence 4678999999999999999999999999999884 566552 3 332 21111111110 00000
Q ss_pred ccceEEEecChhhHHHHHHHHhh-----CCCEEEEEcCCccCHHHHhhCCce
Q 003909 661 QHMALFTRVEPSHKRMLVEALQN-----QNEVVAMTGDGVNDAPALKKADIG 707 (787)
Q Consensus 661 ~~~~v~~~~~p~~K~~~v~~l~~-----~~~~v~~vGDg~ND~~ml~~A~vg 707 (787)
+..+...+.|...++.+.+ ....++.+||+.+|+.+-+++|+.
T Consensus 94 ----~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 94 ----VISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ----cccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 1111122347777776665 345667799999999998888774
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00043 Score=69.19 Aligned_cols=100 Identities=16% Similarity=0.184 Sum_probs=70.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+++++|+++|++++++|+.+...+....+.+|+..+.. .++...+... ..-.|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~----~i~~~~~~~~----------------~KP~~ 153 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFD----AVITSEEEGV----------------EKPHP 153 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhcc----EEEEeccCCC----------------CCCCH
Confidence 578999999999999999999999999988888899999865431 1111111100 01122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCc-eEecC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADI-GIAMG 711 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~v-gia~~ 711 (787)
+--..+.+.+....+.+++|||+. +|+.+-+.||+ .|.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 154 KIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 322344444544567899999998 99999999998 45554
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00091 Score=66.64 Aligned_cols=115 Identities=16% Similarity=0.062 Sum_probs=76.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+... ..++..+.... ..-.|
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-----~~i~~~~~~~~----------------~KP~p 141 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-----EVFVTAERVKR----------------GKPEP 141 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-----cEEEEHHHhcC----------------CCCCc
Confidence 5789999999999999999999999988777777777776321 11222211110 01223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCCcc-HHHHhhcCeeccC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGSGT-AVAKSASDMVLAD 727 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~~~-~~~~~~ad~v~~~ 727 (787)
+--....+.+.-..+.+++|||+.+|+.+-+.||+ .|++.++. ......+|+++.+
T Consensus 142 ~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 142 DAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 33344455555557889999999999999999998 45665432 2223356776654
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00044 Score=68.82 Aligned_cols=91 Identities=19% Similarity=0.230 Sum_probs=62.8
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCC----CHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGD----NKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd----~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
+.+.+++.++.++++|+++.++|++ ...++..+.+.+|+.... ..++.++....
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f----~~i~~~d~~~~------------------ 172 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN----PVIFAGDKPGQ------------------ 172 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe----eEEECCCCCCC------------------
Confidence 4555999999999999999999999 667899999999997532 11111111100
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-Eec
Q 003909 669 VEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAM 710 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg-ia~ 710 (787)
..| +|.. .+++.+ .++++||+.||+.+-+.||+- |++
T Consensus 173 ~Kp-~~~~---~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 173 YQY-TKTQ---WIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCC-CHHH---HHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 012 2332 334444 478899999999999999984 444
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00074 Score=63.59 Aligned_cols=144 Identities=16% Similarity=0.193 Sum_probs=89.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhc---------------cCChHHH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFE---------------ELPAMQQ 656 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 656 (787)
.+-|++.++++.|++. ...+++|-.-.+-++++|+.+|+...........++..... .+..+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 5779999999999887 45555555566678899999999654322111111111000 0111111
Q ss_pred HHhhccceEEEecChhh---------------HHHHHHHHhhC---CCEEEEEcCCccCHHHHhhCC-ce-EecC-CccH
Q 003909 657 TVALQHMALFTRVEPSH---------------KRMLVEALQNQ---NEVVAMTGDGVNDAPALKKAD-IG-IAMG-SGTA 715 (787)
Q Consensus 657 ~~~~~~~~v~~~~~p~~---------------K~~~v~~l~~~---~~~v~~vGDg~ND~~ml~~A~-vg-ia~~-~~~~ 715 (787)
...+. .+|.|..|.+ |..+++.+... ....+.+||+..|+.||+.+. -| +|+. ||.+
T Consensus 162 fe~lD--e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 162 FEKLD--ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHH--HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 11111 2456666654 44444444332 234678899999999999883 33 6666 8899
Q ss_pred HHHhhcCeeccCCCchHHHHHHH
Q 003909 716 VAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 716 ~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
-+...||+.+.+.+...+..+|+
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 99999999998888888777774
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00052 Score=68.57 Aligned_cols=103 Identities=15% Similarity=0.092 Sum_probs=71.2
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.+...+....+.+|+.... ..++...+...- .-.|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f----d~iv~s~~~~~~----------------KP~p 152 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL----DLLLSTHTFGYP----------------KEDQ 152 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC----CEEEEeeeCCCC----------------CCCH
Confidence 67899999999999999999999999998888888888876532 111111111000 0112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce--EecCCcc
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG--IAMGSGT 714 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg--ia~~~~~ 714 (787)
+-=..+.+.+.-..+.+++|||+.+|+.+-+.||+. +++.++.
T Consensus 153 ~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~ 197 (224)
T PRK14988 153 RLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPD 197 (224)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCC
Confidence 222344455554567899999999999999999996 4455443
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00059 Score=66.79 Aligned_cols=93 Identities=22% Similarity=0.130 Sum_probs=67.3
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
+++.+...++++.|+++|+++.++||.+...+..+.+.+|+..... .++..+.. .....
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~----~~~~~~~~-----------------~~KP~ 163 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFP----VQIWMEDC-----------------PPKPN 163 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCC----EEEeecCC-----------------CCCcC
Confidence 4456667999999999999999999999999999999999876431 11111111 00133
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhC
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKA 704 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A 704 (787)
|+.-..+++.+....+.+++|||+.+|+.+-+.|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 4444556666666677899999999999987654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00072 Score=66.26 Aligned_cols=97 Identities=18% Similarity=0.257 Sum_probs=69.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+++++|+++|++++++|+-+...+....+.+|+..+. ..++..++.... .-.|
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f----d~i~~s~~~~~~----------------KP~~ 151 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF----DAVLSADAVRAY----------------KPAP 151 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh----heeEehhhcCCC----------------CCCH
Confidence 47899999999999999999999999999999999999986532 112211111100 1122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
+-=..+.+.+....+.+++|||+.+|+.+-+.||+-.
T Consensus 152 ~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 152 QVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 2224455555555778999999999999999999854
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00046 Score=62.93 Aligned_cols=107 Identities=18% Similarity=0.097 Sum_probs=76.5
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhC----CCCCccccccccccchhhccCChHHHHHhhccceEEE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIG----AFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~g----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
.++|+.++.++.+++++++++++|+.......++.++++ +....+..+...+...-.. ..++.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h-------------~i~~~ 139 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQH-------------SIKYT 139 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCce-------------eeecC
Confidence 589999999999999999999999999999999999887 3322111111111100000 00111
Q ss_pred ecC--hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC
Q 003909 668 RVE--PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG 711 (787)
Q Consensus 668 ~~~--p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~ 711 (787)
..+ .-+|...++.+++..+.+.++|||..|+++-+.+|+-.|-.
T Consensus 140 ~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK~ 185 (220)
T COG4359 140 DDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAKD 185 (220)
T ss_pred CccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhHH
Confidence 111 24789999999999999999999999999998888877753
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0011 Score=60.16 Aligned_cols=93 Identities=18% Similarity=0.227 Sum_probs=67.1
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCC--------HHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhcc
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDN--------KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQH 662 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~--------~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (787)
.++.|++.++++.|+++|++++++|+.. ...+..+.+.+|+..... ...+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----~~~~-~--------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVL-----YACP-H--------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEE-----EECC-C---------------
Confidence 3678999999999999999999999999 777888899988853210 0000 0
Q ss_pred ceEEEecChhhHHHHHHHHh-hCCCEEEEEcC-CccCHHHHhhCCce
Q 003909 663 MALFTRVEPSHKRMLVEALQ-NQNEVVAMTGD-GVNDAPALKKADIG 707 (787)
Q Consensus 663 ~~v~~~~~p~~K~~~v~~l~-~~~~~v~~vGD-g~ND~~ml~~A~vg 707 (787)
...-.|+.=..+++.++ -..+.+++||| ..+|+.+-+.+|+-
T Consensus 83 ---~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 ---CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ---CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 00112333345556663 55678999999 69999999999984
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0012 Score=63.04 Aligned_cols=101 Identities=13% Similarity=-0.015 Sum_probs=63.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHH--------HHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccc
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKS--------TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHM 663 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~--------~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (787)
++-|++.+++++|+++|++++++|+.... ......+..|+....... ...++...
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~---~~~~~~~~-------------- 90 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCP---HKHGDGCE-------------- 90 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECc---CCCCCCCC--------------
Confidence 36899999999999999999999987641 123334556665421100 00000000
Q ss_pred eEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-ecC
Q 003909 664 ALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AMG 711 (787)
Q Consensus 664 ~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi-a~~ 711 (787)
...-.|+-=..+++.+....+.+++|||+.+|+.+-+.||+-. ++.
T Consensus 91 --~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~ 137 (173)
T PRK06769 91 --CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVR 137 (173)
T ss_pred --CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEe
Confidence 0012233334555555555678999999999999999999954 443
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0015 Score=68.82 Aligned_cols=108 Identities=15% Similarity=0.070 Sum_probs=75.8
Q ss_pred cCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCC-CccccccccccchhhccCChHHHHHhhccceEEE
Q 003909 589 MLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD-HLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 589 ~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
..+++.+++.+++++|++.|++++++||++...+..+.+.+|+.. +... +...+.... +... .--.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~----i~~~~~~~~--------~~~~-~~~~ 250 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD----LIGRPPDMH--------FQRE-QGDK 250 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh----hhCCcchhh--------hccc-CCCC
Confidence 567899999999999999999999999999999999999999875 2110 000000000 0000 0001
Q ss_pred ecChhhHHHHHHHHhh-CCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 668 RVEPSHKRMLVEALQN-QNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~-~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
+-.|+-+...++.+.. ..+.+++|||..+|+.+-+.||+-+.
T Consensus 251 kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 251 RPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred CCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 2446667777766544 34789999999999999999999643
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.002 Score=66.94 Aligned_cols=118 Identities=19% Similarity=0.246 Sum_probs=75.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|++.|+++.++|+.+......+.+..+........ . .+.+++... ....|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~-~-~v~~~~~~~----------------~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGL-D-VFAGDDVPK----------------KKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCce-E-EEeccccCC----------------CCCCH
Confidence 57899999999999999999999999988888777665432211000 0 011111000 01223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec-CCc--cHHHHhhcCeeccC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM-GSG--TAVAKSASDMVLAD 727 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~-~~~--~~~~~~~ad~v~~~ 727 (787)
+-=..+++.+.-..+.+++|||+.+|+.+-+.||+.+.. ..+ .......+|+++.+
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 333455566655567899999999999999999986543 222 22112357887754
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0023 Score=71.44 Aligned_cols=122 Identities=10% Similarity=0.158 Sum_probs=81.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+..+... ++..++... ...|
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~----i~~~d~v~~-----------------~~kP 388 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTE----TFSIEQINS-----------------LNKS 388 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcce----eEecCCCCC-----------------CCCc
Confidence 6789999999999999999999999999999999999998764311 122211100 0123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCC--ccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGS--GTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~--~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
+--...++.+ ..+.+++|||+.+|+.+-+.||+ .|++.. ..+.....+|+++. ++..+..++.
T Consensus 389 ~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 454 (459)
T PRK06698 389 DLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILS 454 (459)
T ss_pred HHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHH
Confidence 2222223333 24679999999999999999998 444432 22222345788874 3566655554
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0025 Score=60.13 Aligned_cols=114 Identities=10% Similarity=0.022 Sum_probs=73.6
Q ss_pred CcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHH
Q 003909 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGD-NKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTV 658 (787)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd-~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (787)
+........-+-++.|++.+.++.|+++|+++.++|+. ....+..+.+.+|+...... ..+..
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~----------------~~~~~ 96 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKT----------------VPMHS 96 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCc----------------ccHHH
Confidence 34455555556678999999999999999999999987 88889999999998611000 00000
Q ss_pred hhccceEEEecChhhH--HHHHHHHh------hCCCEEEEEcCCccCHHHHhhCCceEec
Q 003909 659 ALQHMALFTRVEPSHK--RMLVEALQ------NQNEVVAMTGDGVNDAPALKKADIGIAM 710 (787)
Q Consensus 659 ~~~~~~v~~~~~p~~K--~~~v~~l~------~~~~~v~~vGDg~ND~~ml~~A~vgia~ 710 (787)
.+. ..+.++..+..| ..+.+.+. -..+.+++|||+..|+.+-++||+-++.
T Consensus 97 ~Fd-~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 97 LFD-DRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred hce-eeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 000 001111111111 23344443 2357899999999999999999996654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0011 Score=63.27 Aligned_cols=98 Identities=20% Similarity=0.314 Sum_probs=71.8
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.++.|++.+.+++|+++|++++++|+.+...+....+++|+.... ..++...+.... ...
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f----~~i~~~~~~~~~----------------Kp~ 135 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF----DEIISSDDVGSR----------------KPD 135 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC----SEEEEGGGSSSS----------------TTS
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc----ccccccchhhhh----------------hhH
Confidence 367899999999999999999999999999999999999987432 111111111110 012
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
|+-=..+++.+.-..+.+++|||+..|+.+-+.||+.-
T Consensus 136 ~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 136 PDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 23334556666666788999999999999999999853
|
... |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0045 Score=62.66 Aligned_cols=43 Identities=23% Similarity=0.305 Sum_probs=35.6
Q ss_pred hhHHHHHHHHhhCCCEEEEEcC----CccCHHHHhh-CCceEecCCccH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGD----GVNDAPALKK-ADIGIAMGSGTA 715 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGD----g~ND~~ml~~-A~vgia~~~~~~ 715 (787)
.+|...++.++ ..+.|++||| +.||++||+. --.|+++.+-.+
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 37899999998 7788999999 8999999997 556999964433
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0057 Score=58.89 Aligned_cols=125 Identities=21% Similarity=0.219 Sum_probs=71.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHhCCCCCccccccccccchhh--ccCChH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNK---------------STAESICHKIGAFDHLVDFVGRSYTASEF--EELPAM 654 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~---------------~~a~~~a~~~gi~~~~~~~~~~~~~~~~~--~~~~~~ 654 (787)
.+.|++.+++++|+++|+++.++|..+. .....+.+..|+... .++..... +..
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~------~i~~~~~~~~~~~--- 99 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD------GIYYCPHHPEDGC--- 99 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc------eEEECCCCCCCCC---
Confidence 4679999999999999999999998863 112223444554210 00000000 000
Q ss_pred HHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-ecCCcc--H-HHHhhc--CeeccCC
Q 003909 655 QQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AMGSGT--A-VAKSAS--DMVLADD 728 (787)
Q Consensus 655 ~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi-a~~~~~--~-~~~~~a--d~v~~~~ 728 (787)
-...-.|+--..+++.+....+.+++|||+.+|+.+-+.||+.+ .+..+. . .....+ |+++.+
T Consensus 100 ----------~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~- 168 (181)
T PRK08942 100 ----------DCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDS- 168 (181)
T ss_pred ----------cCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecC-
Confidence 00112234344555556555678999999999999999999843 333221 1 122234 776643
Q ss_pred CchHHHHHH
Q 003909 729 NFATIVAAV 737 (787)
Q Consensus 729 ~~~~i~~~i 737 (787)
+..+.+++
T Consensus 169 -l~el~~~l 176 (181)
T PRK08942 169 -LADLPQAL 176 (181)
T ss_pred -HHHHHHHH
Confidence 55555544
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0017 Score=62.78 Aligned_cols=95 Identities=16% Similarity=0.162 Sum_probs=63.5
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++|+.|+++|+++.++|+... +....+.+|+..... .++...+... .+..|
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~----~~~~~~~~~~----------------~kp~p 144 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFD----AIVDPAEIKK----------------GKPDP 144 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCc----EEEehhhcCC----------------CCCCh
Confidence 5789999999999999999999998643 456788888865431 1111111100 01223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
+-=...++.+.-..+.+++|||+.+|+.+-+.||+-.
T Consensus 145 ~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 145 EIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 2223444444444567899999999999999999843
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0028 Score=61.12 Aligned_cols=95 Identities=14% Similarity=0.167 Sum_probs=65.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+++++|+++|++++++|+..... ..+..++|+..... .++.+.+.. ...-.|
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~----~i~~~~~~~----------------~~KP~~ 143 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFD----VVIFSGDVG----------------RGKPDP 143 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCC----EEEEcCCCC----------------CCCCCH
Confidence 578999999999999999999999999888 66666688865321 111111100 001223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG 707 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg 707 (787)
+--..+.+.+......+++|||+..|+.+-+.+|+-
T Consensus 144 ~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 144 DIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 333445555555577899999999999999999983
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0019 Score=62.47 Aligned_cols=96 Identities=19% Similarity=0.163 Sum_probs=64.4
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
-++.|++.++++.|+++|++++++|+. ..+..+.+.+|+...... ++....... ....
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~----v~~~~~~~~----------------~kp~ 144 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDA----IVDADEVKE----------------GKPH 144 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCE----eeehhhCCC----------------CCCC
Confidence 368999999999999999999999998 567788888888653211 111110000 0011
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
|+-=..+.+.+....+.+++|||+.+|+.+-+.||+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 22112334444444567889999999999999999853
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0029 Score=68.41 Aligned_cols=116 Identities=14% Similarity=0.111 Sum_probs=76.0
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH-HhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH-KIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
++.|++.+.++.|+++|+++.++|+.....+....+ ..|+.... +.++..++... ..-.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F----d~ii~~d~v~~----------------~KP~ 152 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF----SVIVGGDEVEK----------------GKPS 152 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC----CEEEehhhcCC----------------CCCC
Confidence 467999999999999999999999999888877665 67775432 11122211100 0122
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-ecCCc--cHHHHhhcCeeccC
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AMGSG--TAVAKSASDMVLAD 727 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi-a~~~~--~~~~~~~ad~v~~~ 727 (787)
|+-=..+++.+.-..+.+++|||+.+|+.+-+.||+.. ++..+ .......+|+++.+
T Consensus 153 p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 153 PDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCC
Confidence 33334455555555678999999999999999999864 34332 22233346666543
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0027 Score=63.57 Aligned_cols=98 Identities=17% Similarity=0.160 Sum_probs=68.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.+++|+++ ++++++|+.....+....+++|+..... .++...+... ....|
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd----~i~~~~~~~~----------------~KP~~ 155 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFD----DIFVSEDAGI----------------QKPDK 155 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcC----EEEEcCccCC----------------CCCCH
Confidence 5789999999999999 9999999999999999999999866431 1111111100 01222
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcCCc-cCHHHHhhCCc-eEec
Q 003909 672 SHKRMLVEAL-QNQNEVVAMTGDGV-NDAPALKKADI-GIAM 710 (787)
Q Consensus 672 ~~K~~~v~~l-~~~~~~v~~vGDg~-ND~~ml~~A~v-gia~ 710 (787)
+-=...++.+ .-..+.+++|||+. +|+.+-+.+|+ +|.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~ 197 (224)
T TIGR02254 156 EIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWM 197 (224)
T ss_pred HHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEE
Confidence 2224455555 44566799999998 89999999998 3344
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.005 Score=58.93 Aligned_cols=125 Identities=16% Similarity=0.112 Sum_probs=67.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHH---------------HHHHHHHHhCCCCCccccccccccchhhccCChHHH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKS---------------TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQ 656 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~---------------~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (787)
++.|++.++|++|+++|++++++|.-+.. ....+..+.|+.............+ .......
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~--~~~~~~~-- 101 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEG--VEEFRQV-- 101 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcc--cccccCC--
Confidence 36789999999999999999999987641 1122333444331100000000000 0000000
Q ss_pred HHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE--ecCCccH---HHHhhcCeeccC
Q 003909 657 TVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI--AMGSGTA---VAKSASDMVLAD 727 (787)
Q Consensus 657 ~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi--a~~~~~~---~~~~~ad~v~~~ 727 (787)
.-...-.|+-=....+.+.-..+.++||||..+|+.+-+.||+.. .+..+.. .....+|+++.+
T Consensus 102 -------~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~ 170 (176)
T TIGR00213 102 -------CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNS 170 (176)
T ss_pred -------CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEecc
Confidence 000011233223444444445678899999999999999999953 4433321 112347887753
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0036 Score=59.49 Aligned_cols=91 Identities=14% Similarity=0.144 Sum_probs=65.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDN-KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~-~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.+.|++.+++++|++.|++++++|+.+ ...+..+.+.+|+.... + ...-.
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~--------------------~~KP~ 93 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------H--------------------AVKPP 93 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------C--------------------CCCCC
Confidence 678999999999999999999999998 67777888888764310 0 00112
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCce-EecC
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIG-IAMG 711 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~vg-ia~~ 711 (787)
|+-=..+++.+....+.+++|||.. .|+.+-+.||+- |.+.
T Consensus 94 p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~ 136 (170)
T TIGR01668 94 GCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVE 136 (170)
T ss_pred hHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEc
Confidence 2222334444444467799999998 799999999994 4443
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.005 Score=61.65 Aligned_cols=123 Identities=12% Similarity=0.119 Sum_probs=76.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|+ +|+++.++|+.....+....+.+|+..... .++...+... ..-.|
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd----~v~~~~~~~~----------------~KP~p 153 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFD----LLVISEQVGV----------------AKPDV 153 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcC----EEEEECccCC----------------CCCCH
Confidence 47899999999999 689999999999988888888888865321 1111111100 01122
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCc-cCHHHHhhCCce-EecC-CccHH-HHhhcCeeccCCCchHHHHHH
Q 003909 672 SHKRMLVEALQNQ-NEVVAMTGDGV-NDAPALKKADIG-IAMG-SGTAV-AKSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 672 ~~K~~~v~~l~~~-~~~v~~vGDg~-ND~~ml~~A~vg-ia~~-~~~~~-~~~~ad~v~~~~~~~~i~~~i 737 (787)
+-=..+++.+.-. .+.+++|||+. +|+.+-+.||+- |.+. .+... ....+|+++.+ +..+..++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 154 AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 2223444444422 35799999998 799999999995 4443 22111 11246776643 55555544
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.009 Score=58.68 Aligned_cols=81 Identities=16% Similarity=0.131 Sum_probs=57.6
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEE
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKST---AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~---a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
.+.-|++.++++.|+++|++|+++|||+... +..-.++.|+.... . ++.
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~----~------------------------LiL 170 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWK----H------------------------LIL 170 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcC----e------------------------eee
Confidence 4788999999999999999999999999766 44455667776421 1 222
Q ss_pred ec-------ChhhHHHHHHHHhhCCC-EEEEEcCCccCHH
Q 003909 668 RV-------EPSHKRMLVEALQNQNE-VVAMTGDGVNDAP 699 (787)
Q Consensus 668 ~~-------~p~~K~~~v~~l~~~~~-~v~~vGDg~ND~~ 699 (787)
|. ...-|...-+.+.+.|. +++.+||..+|+.
T Consensus 171 R~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 171 RGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred cCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 21 01226677766766665 5577999999983
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0083 Score=56.66 Aligned_cols=37 Identities=16% Similarity=0.291 Sum_probs=34.6
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCC
Q 003909 596 EVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF 632 (787)
Q Consensus 596 ~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~ 632 (787)
.+...+.+|+++|++|+++|.........+-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999999999999999988
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.011 Score=59.89 Aligned_cols=87 Identities=15% Similarity=0.188 Sum_probs=60.5
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEE
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKST---AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~---a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (787)
..++-|++.+.++.|+++|++++++|+|.... +....++.|+...... .++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d--------------------------~ll 169 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE--------------------------HLL 169 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc--------------------------eEE
Confidence 34578999999999999999999999998544 3456677888642100 133
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHh
Q 003909 667 TRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALK 702 (787)
Q Consensus 667 ~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~ 702 (787)
.+.....|....+.+.+..+.+++|||..+|.....
T Consensus 170 lr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 170 LKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred eCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 332223455555566555567999999999996543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0065 Score=60.59 Aligned_cols=98 Identities=14% Similarity=0.142 Sum_probs=61.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHH-HHHHhCCCCCccccccccccch--hhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAES-ICHKIGAFDHLVDFVGRSYTAS--EFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~-~a~~~gi~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
++.|++.+.|+.|+++|+++.++||-....... ..+..++.... ..++..+ +... ..
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f----~~i~~~~~~~~~~----------------~K 137 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLM----HHVVTGDDPEVKQ----------------GK 137 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhC----CEEEECChhhccC----------------CC
Confidence 578999999999999999999999987654432 22223333211 1111111 1100 01
Q ss_pred cChhhHHHHHHHHh---hCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 669 VEPSHKRMLVEALQ---NQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 669 ~~p~~K~~~v~~l~---~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
-.|+-=...++.+. -..+.+++|||+..|+.+-+.||+...
T Consensus 138 P~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 138 PAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred CCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 12333344555553 335789999999999999999999543
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0054 Score=60.33 Aligned_cols=95 Identities=14% Similarity=0.129 Sum_probs=63.2
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|+++|++++++|+-... .....+.+|+..... .++...+... ..-.|
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd----~i~~s~~~~~----------------~KP~~ 163 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFD----FVVTSYEVGA----------------EKPDP 163 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcc----eEEeecccCC----------------CCCCH
Confidence 57899999999999999999999987654 467778888754321 1111111000 01122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCce
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIG 707 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~vg 707 (787)
+-=..+++.+....+.+++|||+. +|+.+-+.||+-
T Consensus 164 ~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 164 KIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 222334444444567899999997 899999999874
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0062 Score=56.34 Aligned_cols=100 Identities=19% Similarity=0.212 Sum_probs=62.5
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHhCCCCCccccccccccchhhccCChHHH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNK---------------STAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQ 656 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~---------------~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (787)
++.|++.++++.|+++|++++++|+.+. ..+....+.+|+..... +.......+...
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~~~~~~~~------- 98 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGV-LFCPHHPADNCS------- 98 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEE-EECCCCCCCCCC-------
Confidence 4789999999999999999999999763 34566777888752100 000000000000
Q ss_pred HHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 003909 657 TVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 657 ~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
...-.|+-=..+++.+.-..+.+++|||+..|+.+-+.+|+-.
T Consensus 99 ---------~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 99 ---------CRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ---------CCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 0001122223344444444577999999999999999999854
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0093 Score=58.91 Aligned_cols=98 Identities=12% Similarity=0.140 Sum_probs=68.3
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHh---CCCCCccccccccccchhhccCChHHHHHhhccceEE
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI---GAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (787)
+-++.|++.+++++|+++|+++.++|..+......+.+.. ++...... .++. .+-
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~----~fd~------------------~~g 150 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSG----YFDT------------------TVG 150 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcce----EEEe------------------Ccc
Confidence 4578999999999999999999999999988777776665 23221100 0000 011
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 667 TRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 667 ~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
..-.|+-=..+++.+.-..+.++++||...|+.+-+.||+-..
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 1123333355566666566789999999999999999999654
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.012 Score=53.48 Aligned_cols=85 Identities=22% Similarity=0.350 Sum_probs=68.9
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.+..|+.++-+.+++++|++++++|.-+...+...++.+|++. ++--..
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f-------------------------------i~~A~K 93 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF-------------------------------IYRAKK 93 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce-------------------------------eecccC
Confidence 4689999999999999999999999999999999999999976 333334
Q ss_pred hhhH--HHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCc
Q 003909 671 PSHK--RMLVEALQNQNEVVAMTGDGV-NDAPALKKADI 706 (787)
Q Consensus 671 p~~K--~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~v 706 (787)
|..+ .+.++.++-..+.|+||||.. .|+-.=+.||+
T Consensus 94 P~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 94 PFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred ccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 4433 356666666788999999986 68887777776
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0071 Score=56.65 Aligned_cols=97 Identities=13% Similarity=0.077 Sum_probs=61.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCC---------------HHHHHHHHHHhCCCCCcccccccccc----chhhccCC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDN---------------KSTAESICHKIGAFDHLVDFVGRSYT----ASEFEELP 652 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~---------------~~~a~~~a~~~gi~~~~~~~~~~~~~----~~~~~~~~ 652 (787)
++-|++.++|++|+++|++++++|... ...+..+.+.+|+... ...+. .++..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd-----~ii~~~~~~~~~~~--- 100 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD-----DVLICPHFPDDNCD--- 100 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee-----EEEECCCCCCCCCC---
Confidence 467899999999999999999999853 4456677788887510 00000 00000
Q ss_pred hHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 653 AMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 653 ~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
...-.|+-=..+++.+....+.+++|||+.+|+.+-+.||+...
T Consensus 101 -------------~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 101 -------------CRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -------------CCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00011222223333333345679999999999999999999654
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0078 Score=56.15 Aligned_cols=90 Identities=18% Similarity=0.151 Sum_probs=59.7
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChh
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPS 672 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 672 (787)
..+++.+.++.|+++|+++.++|+.....+....+.. +..... .++..+. +.....|+
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~----~i~~~~~-----------------~~~Kp~~~ 122 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFD----LILGSDE-----------------FGAKPEPE 122 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCc----EEEecCC-----------------CCCCcCHH
Confidence 3478999999999999999999999999998888875 433210 1111100 00112232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCC
Q 003909 673 HKRMLVEALQNQNEVVAMTGDGVNDAPALKKAD 705 (787)
Q Consensus 673 ~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~ 705 (787)
-=..+.+.+.... .+++|||+.+|+.+-+.||
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 2233444444445 7899999999999988875
|
HAD subfamilies caused by an overly broad single model. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.035 Score=58.48 Aligned_cols=47 Identities=15% Similarity=0.079 Sum_probs=38.6
Q ss_pred CCcEEEEEeccCC--CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH
Q 003909 579 KDLTFIGLVGMLD--PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC 626 (787)
Q Consensus 579 ~~l~~lG~i~~~d--~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a 626 (787)
-|++|+-+..-.+ .+.+++.++|++|. +|+.++++|||....+..+.
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 4667766555333 58999999999999 78999999999999998874
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.012 Score=52.94 Aligned_cols=88 Identities=6% Similarity=0.037 Sum_probs=59.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCC-CHHHHHHHHHHhC-------CCCCccccccccccchhhccCChHHHHHhhccc
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGD-NKSTAESICHKIG-------AFDHLVDFVGRSYTASEFEELPAMQQTVALQHM 663 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd-~~~~a~~~a~~~g-------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (787)
++.+++.+.++.|+++|++++++|+. ....+..+.+..+ +.... ..+..+..
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f----~~~~~~~~---------------- 88 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYF----DPLTIGYW---------------- 88 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhh----hhhhhcCC----------------
Confidence 68999999999999999999999999 7777777777776 22111 00000000
Q ss_pred eEEEecChhhHHHHHHHHh--hCCCEEEEEcCCccCHHHHhh
Q 003909 664 ALFTRVEPSHKRMLVEALQ--NQNEVVAMTGDGVNDAPALKK 703 (787)
Q Consensus 664 ~v~~~~~p~~K~~~v~~l~--~~~~~v~~vGDg~ND~~ml~~ 703 (787)
...|+.=..+++.+. -..+.+++|||...|+..++.
T Consensus 89 ----~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 89 ----LPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ----CcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 011333334555555 556889999999999877654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.026 Score=67.10 Aligned_cols=50 Identities=12% Similarity=0.124 Sum_probs=38.4
Q ss_pred CcEEEEEeccCCCCChhHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHHh
Q 003909 580 DLTFIGLVGMLDPPREEVKNAMLSC-MTAGIRVIVVTGDNKSTAESICHKI 629 (787)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l-~~~gi~v~i~TGd~~~~a~~~a~~~ 629 (787)
|++++-.-.....+.+++.+++++| ++.|+.|+++|||...+.......+
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 5555533223346788999999997 7889999999999999988877543
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.025 Score=69.29 Aligned_cols=127 Identities=13% Similarity=0.184 Sum_probs=84.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCC-CCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF-DHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.+.|++.+.+++|+++|++++++|+.....+....+.+|+. ... ..++..++.... .-.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F----d~iv~~~~~~~~----------------KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF----DAIVSADAFENL----------------KPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC----CEEEECcccccC----------------CCC
Confidence 36799999999999999999999999999999999999985 221 111222111100 122
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCCc---cHHHHhhcCeeccCCCchHHHHHHH
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGSG---TAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~~---~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
|+-=...++.+....+.+++|||..+|+.+-+.||+ .|++..+ .+.....+|+++.+-..-.+.+++.
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~ 292 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILT 292 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHh
Confidence 333345556665567789999999999999999999 4444422 2233345777776654444555543
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.058 Score=55.06 Aligned_cols=48 Identities=19% Similarity=0.194 Sum_probs=37.8
Q ss_pred EEeccCCC----CChhHHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHhCCC
Q 003909 585 GLVGMLDP----PREEVKNAMLSCMTAGIRVIVVTGDNKST---AESICHKIGAF 632 (787)
Q Consensus 585 G~i~~~d~----~~~~~~~~i~~l~~~gi~v~i~TGd~~~~---a~~~a~~~gi~ 632 (787)
|++.-.++ +-|++.++|++|+++|++++++||++..+ .....+++|++
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44444455 88999999999999999999999987776 44455667875
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.024 Score=53.44 Aligned_cols=94 Identities=12% Similarity=0.103 Sum_probs=59.3
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHH------------HHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhh
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKS------------TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~------------~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (787)
+-|++.+++++|+++|+++.++|..+.. .+..+.+.+|+.... ++.....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~------ii~~~~~------------ 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPIQV------LAATHAG------------ 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCEEE------EEecCCC------------
Confidence 3489999999999999999999976542 456678888874311 0000000
Q ss_pred ccceEEEecChhhHHHHHHHHh--hCCCEEEEEcCCc--------cCHHHHhhCCceE
Q 003909 661 QHMALFTRVEPSHKRMLVEALQ--NQNEVVAMTGDGV--------NDAPALKKADIGI 708 (787)
Q Consensus 661 ~~~~v~~~~~p~~K~~~v~~l~--~~~~~v~~vGDg~--------ND~~ml~~A~vgi 708 (787)
....-.|+-=..+.+.+. -..+.+++|||.. +|+.+-+.||+-.
T Consensus 105 ----~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 ----LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ----CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000011222233444443 3346799999986 6999998888754
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.011 Score=54.76 Aligned_cols=97 Identities=14% Similarity=0.031 Sum_probs=66.7
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
-+++|++.+.++.|+ .++++.++|.-+...+..+.+.+|+..... ..++..++.. +..
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f---~~i~~~~d~~------------------~~K 101 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFG---YRRLFRDECV------------------FVK 101 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEe---eeEEECcccc------------------ccC
Confidence 357999999999999 579999999999999999999998854211 1111111110 011
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM 710 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~ 710 (787)
|. =...++.+....+.+++|||+.+|+.+-+.+++-|..
T Consensus 102 P~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 102 GK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred Ce-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 21 1122344445577899999999999998788776654
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.084 Score=53.42 Aligned_cols=94 Identities=13% Similarity=0.126 Sum_probs=61.6
Q ss_pred EEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHH--HHHHHhCCCC-CccccccccccchhhccCChHHHHHhhc
Q 003909 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE--SICHKIGAFD-HLVDFVGRSYTASEFEELPAMQQTVALQ 661 (787)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~--~~a~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (787)
|.+.-...+-|++.+++++|+++|++++++|..+..... ...+++|+.. ... .
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~----~-------------------- 72 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPE----M-------------------- 72 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccc----e--------------------
Confidence 455556788999999999999999999999997665544 5668888864 210 1
Q ss_pred cceEEEecChhhHHHHHHHHhh---CCCEEEEEcCCccCHHHHhhCCc
Q 003909 662 HMALFTRVEPSHKRMLVEALQN---QNEVVAMTGDGVNDAPALKKADI 706 (787)
Q Consensus 662 ~~~v~~~~~p~~K~~~v~~l~~---~~~~v~~vGDg~ND~~ml~~A~v 706 (787)
+++.. ......+.+.+++ .+..+.++||+..|...+..++.
T Consensus 73 ---Ii~s~-~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 73 ---IISSG-EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred ---EEccH-HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 11111 0011122222222 35679999999999988865543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.047 Score=54.07 Aligned_cols=104 Identities=20% Similarity=0.229 Sum_probs=66.8
Q ss_pred CCChhHHHHHHHH--HhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccch-hhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAMLSC--MTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTAS-EFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l--~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
|+.|+.+++++.+ ++.|+.++++|.-+......+-+.-|+...... +++.. .++.-.......... .-+.+
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~----I~TNpa~~~~~G~l~v~pyh~--h~C~~ 144 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSE----IFTNPACFDADGRLRVRPYHS--HGCSL 144 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccce----EEeCCceecCCceEEEeCccC--CCCCc
Confidence 6788999999999 458999999999999999999999998754311 11111 000000000000000 01123
Q ss_pred cCh-hhHHHHHHHHhhC----C---CEEEEEcCCccCHHHH
Q 003909 669 VEP-SHKRMLVEALQNQ----N---EVVAMTGDGVNDAPAL 701 (787)
Q Consensus 669 ~~p-~~K~~~v~~l~~~----~---~~v~~vGDg~ND~~ml 701 (787)
+.| .=|..+++.+... | .+|++||||.||....
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~ 185 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPA 185 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcc
Confidence 433 3588888777654 3 6899999999998764
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.031 Score=54.71 Aligned_cols=98 Identities=15% Similarity=0.107 Sum_probs=62.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-hCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK-IGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
++.|++.++++.|+++|++++++|.-+.......... .++.... ..++...+.... .-.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f----d~v~~s~~~~~~----------------KP~ 143 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA----DHIYLSQDLGMR----------------KPE 143 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc----CEEEEecccCCC----------------CCC
Confidence 4789999999999999999999999887665443222 2332211 111111111000 112
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
|+-=..+++.+....+.+++|||+..|+.+-+.||+...
T Consensus 144 p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 144 ARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred HHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 332244555555556789999999999999999999543
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.029 Score=55.49 Aligned_cols=102 Identities=13% Similarity=0.112 Sum_probs=61.3
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHH--HHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKST--AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~--a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
-++.|++.++++.|+++|++++++|+..... ........++.... ..++...+.. ...
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f----d~v~~s~~~~----------------~~K 152 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF----DAVVESCLEG----------------LRK 152 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC----CEEEEeeecC----------------CCC
Confidence 3578999999999999999999999875433 22223333443221 0011000000 001
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EecCC
Q 003909 669 VEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMGS 712 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg-ia~~~ 712 (787)
-.|+-=..+++.+.-..+.+++|||...|+.+-+.||+- |.+.+
T Consensus 153 P~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 153 PDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 122222344455554567788899999999999999994 44443
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.051 Score=57.54 Aligned_cols=100 Identities=14% Similarity=0.013 Sum_probs=61.1
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCC---------------CHHHHHHHHHHhCCCCCccccccccccchh-hccCChH
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGD---------------NKSTAESICHKIGAFDHLVDFVGRSYTASE-FEELPAM 654 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd---------------~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~-~~~~~~~ 654 (787)
-++.|++.+++++|+++|++++++|+- ....+..+.+..|+... ...+.... .+.
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd-----~i~i~~~~~sd~---- 99 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD-----EVLICPHFPEDN---- 99 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee-----eEEEeCCcCccc----
Confidence 468999999999999999999999984 23345566777776411 00000000 000
Q ss_pred HHHHhhccceEEEe-cChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 655 QQTVALQHMALFTR-VEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 655 ~~~~~~~~~~v~~~-~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
..++ ..|.-=..+.+.+....+.++||||+.+|+.+-+.||+-..
T Consensus 100 ----------~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 100 ----------CSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred ----------CCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 0000 11111122223333345789999999999999999999543
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.046 Score=57.84 Aligned_cols=93 Identities=9% Similarity=0.107 Sum_probs=69.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH----hCCCCCccccccccccchhhccCChHHHHHhhccceEEE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK----IGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
++.+++.++|++|+++|+++.++|.-+...+..+.++ +|+..+... +.+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~---------------------------~~~ 83 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDA---------------------------RSI 83 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeE---------------------------EEE
Confidence 3578999999999999999999999999999999988 776543211 111
Q ss_pred --ecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC
Q 003909 668 --RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG 711 (787)
Q Consensus 668 --~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~ 711 (787)
...|+.=..+.+.+.-..+.++||||+..|+.+.+.+...|.+-
T Consensus 84 ~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 84 NWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred ecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 12233333444445445678999999999999999988877553
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.025 Score=57.35 Aligned_cols=65 Identities=18% Similarity=0.228 Sum_probs=47.7
Q ss_pred cChhhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhC--------CceEecCCccHHHHhhcCeeccCCCchHHHHH
Q 003909 669 VEPSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKA--------DIGIAMGSGTAVAKSASDMVLADDNFATIVAA 736 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A--------~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~ 736 (787)
..+.+|...++.+.+. ...++++||+.||.+|++.+ +++|+|+.+ ..+..|++++.+ .+.+.++
T Consensus 163 p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g--~~~~~A~~~~~~--~~~v~~~ 238 (244)
T TIGR00685 163 PRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG--SKKTVAKFHLTG--PQQVLEF 238 (244)
T ss_pred eCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC--CcCCCceEeCCC--HHHHHHH
Confidence 3455788877776543 35789999999999999999 588888533 346678998864 5556666
Q ss_pred H
Q 003909 737 V 737 (787)
Q Consensus 737 i 737 (787)
+
T Consensus 239 L 239 (244)
T TIGR00685 239 L 239 (244)
T ss_pred H
Confidence 5
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.12 Score=52.49 Aligned_cols=50 Identities=10% Similarity=0.018 Sum_probs=41.6
Q ss_pred EEeccCCCCChhHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHhCCCCC
Q 003909 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTG---DNKSTAESICHKIGAFDH 634 (787)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TG---d~~~~a~~~a~~~gi~~~ 634 (787)
|++.-.+.+-|++.++|++|+++|++++++|| |+........+++|+...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 44444566677999999999999999999995 889888888899998643
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.027 Score=56.15 Aligned_cols=97 Identities=14% Similarity=0.168 Sum_probs=66.2
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.| ++++.++|+.....+....+..|+..... ..++++.+.... .-.|
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~---~~v~~~~~~~~~----------------KP~p 145 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP---DKLFSGYDIQRW----------------KPDP 145 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc---ceEeeHHhcCCC----------------CCCh
Confidence 4668999999998 48999999999888888888888865421 011122111100 1223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM 710 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~ 710 (787)
+-=....+.+.-..+.+++|||+.+|+.+-+.||+.+..
T Consensus 146 ~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 146 ALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 333444555554567799999999999999999997753
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.045 Score=53.42 Aligned_cols=100 Identities=11% Similarity=0.051 Sum_probs=58.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+++++|++++ +.+++|..+........+.+|+......+...++..... ...|
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~-------------------~~kp 133 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD-------------------ESKE 133 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC-------------------cccH
Confidence 47899999999999985 566677765555444556666643211110111111100 0112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhC--CceE-ecCCc
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKA--DIGI-AMGSG 713 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A--~vgi-a~~~~ 713 (787)
+--..+++.+. .+.+++|||+.+|+.+-++| |+-. .+..+
T Consensus 134 ~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~ 176 (197)
T PHA02597 134 KLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRG 176 (197)
T ss_pred HHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecch
Confidence 22222333333 45688999999999999999 9954 45444
|
2 hypothetical protein; Provisional |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.067 Score=56.33 Aligned_cols=48 Identities=17% Similarity=0.203 Sum_probs=39.6
Q ss_pred EEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHhCCC
Q 003909 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC---HKIGAF 632 (787)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a---~~~gi~ 632 (787)
|++.-.+.+-|++.++|++|+++|++++++|+++..+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 455556778899999999999999999999999977776666 557764
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.072 Score=51.48 Aligned_cols=93 Identities=13% Similarity=0.071 Sum_probs=64.0
Q ss_pred ChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhh
Q 003909 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSH 673 (787)
Q Consensus 594 ~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 673 (787)
.|+ .+.++.|++. ++..++|+.....+....+.+|+..+.. .++..++... ....|+-
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd----~i~~~~~~~~----------------~KP~p~~ 147 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFD----AVVAADDVQH----------------HKPAPDT 147 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHce----EEEehhhccC----------------CCCChHH
Confidence 344 6899999876 8999999999999999999999875431 1222211110 0122333
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 003909 674 KRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 674 K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
=....+.+......+++|||+.+|+.+-+.||+-.
T Consensus 148 ~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 148 FLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 34555555555667889999999999999999853
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.042 Score=58.47 Aligned_cols=63 Identities=22% Similarity=0.179 Sum_probs=47.5
Q ss_pred hhHHHHHHHHhhC-C---C---EEEEEcCCccCHHHHhh-----CCceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQ-N---E---VVAMTGDGVNDAPALKK-----ADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~-~---~---~v~~vGDg~ND~~ml~~-----A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
-+|...++.+.+. + . .++++||+.||.+||+. +|+||+|+++.... .|++.+.+ .+.|..+++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~d--p~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLRD--PSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcCC--HHHHHHHHH
Confidence 4898888877654 2 1 24889999999999996 69999999876543 57887754 667777764
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.091 Score=52.25 Aligned_cols=99 Identities=19% Similarity=0.208 Sum_probs=77.7
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.++.|++.+.+..|+++|+.++++|+.+...+..+.+.+|+..+.. ..+++.+...- .-.
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~----~~v~~~dv~~~----------------KP~ 144 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFD----VIVTADDVARG----------------KPA 144 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcc----hhccHHHHhcC----------------CCC
Confidence 4789999999999999999999999999999999999999987542 22222222111 234
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
|+-=....+.|.-....+++|.|+.+.+.+-++||.-+-
T Consensus 145 Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 145 PDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred CHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEE
Confidence 565566777776677889999999999999999998654
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.056 Score=46.11 Aligned_cols=49 Identities=18% Similarity=0.213 Sum_probs=36.0
Q ss_pred EEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHhCCCC
Q 003909 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC---HKIGAFD 633 (787)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a---~~~gi~~ 633 (787)
|++...+++-|++.++|++|+++|++++++|..+..+...++ +.+|+..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 445557788999999999999999999999998866655554 5567653
|
... |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.13 Score=49.55 Aligned_cols=98 Identities=16% Similarity=0.190 Sum_probs=65.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.+++.+++++|+ .+++++|+.+...+....+.+|+..... .++..++...-. ....-.|
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd----~i~~~~~~~~~~------------~~~KP~p 144 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFD----GIFCFDTANPDY------------LLPKPSP 144 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhC----eEEEeecccCcc------------CCCCCCH
Confidence 47799999999998 4789999999999999999999865321 111111110000 0001123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
+-=..+++.+....+.+++|||+..|+.+-+.||+..
T Consensus 145 ~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 145 QAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 3334555666656778999999999999999999854
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.21 Score=46.65 Aligned_cols=92 Identities=17% Similarity=0.150 Sum_probs=71.0
Q ss_pred CCCCChhHHHHHHHHHhCCC--EEEEEcCC-------CHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhh
Q 003909 590 LDPPREEVKNAMLSCMTAGI--RVIVVTGD-------NKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi--~v~i~TGd-------~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (787)
++++.|+..+.+++|++.+. +++++|.. ....|..+.+.+|+.-.
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 56799999999999999977 59999997 47889999999998631
Q ss_pred ccceEEEecChhhHHHHHHHHhhC-----CCEEEEEcCCc-cCHHHHhhCC-ceEecC
Q 003909 661 QHMALFTRVEPSHKRMLVEALQNQ-----NEVVAMTGDGV-NDAPALKKAD-IGIAMG 711 (787)
Q Consensus 661 ~~~~v~~~~~p~~K~~~v~~l~~~-----~~~v~~vGDg~-ND~~ml~~A~-vgia~~ 711 (787)
.+....|.-..++++.++.. .+.+++|||-. .|+-|=...| .+|-+.
T Consensus 111 ----~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~ 164 (168)
T PF09419_consen 111 ----RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVT 164 (168)
T ss_pred ----EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEe
Confidence 12234676666788888654 77899999976 6888877776 555443
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.25 Score=55.09 Aligned_cols=100 Identities=17% Similarity=0.061 Sum_probs=63.9
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-hCCCCCccc---c-ccccccchhhccCChHHHHHhhccceEEE
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK-IGAFDHLVD---F-VGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~-~gi~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
+++++.+. +++.|.+ +++|+-+..-++.+|++ +|++.-... . .+..++|.-... .
T Consensus 111 l~~~a~~~---~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~----------------~ 170 (497)
T PLN02177 111 VHPETWRV---FNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKP----------------G 170 (497)
T ss_pred cCHHHHHH---HHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCC----------------C
Confidence 66665554 4567754 99999999999999987 899853211 0 011222210000 0
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCC
Q 003909 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGS 712 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~ 712 (787)
.+.-++|...++..........+.||+.||.+||+.|+-+.+++.
T Consensus 171 ~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 171 VLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 034467887776433211122677999999999999999999975
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.066 Score=53.37 Aligned_cols=89 Identities=16% Similarity=0.147 Sum_probs=56.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHH---HHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKST---AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~---a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
+.-|++.+.++.++++|++|+++|||+... +..-.++.|+.... ...+.+..-..- .
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~----~l~lr~~~~~~~----------------~ 174 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWD----HLILRPDKDPSK----------------K 174 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBS----CGEEEEESSTSS-----------------
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccc----hhcccccccccc----------------c
Confidence 566789999999999999999999998773 33345666754311 111111000000 0
Q ss_pred cChhhHHHHHHHHhhCCC-EEEEEcCCccCHHH
Q 003909 669 VEPSHKRMLVEALQNQNE-VVAMTGDGVNDAPA 700 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~~~-~v~~vGDg~ND~~m 700 (787)
.....|....+.+.+.|. .++.+||..+|+.-
T Consensus 175 ~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 175 SAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp -----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 012347788888888854 56789999999865
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.1 Score=49.69 Aligned_cols=116 Identities=20% Similarity=0.241 Sum_probs=67.7
Q ss_pred CCChhHHHHHHHHHhCCC-EEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAGI-RVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi-~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
|+.|+..++|+.+++.|. .++|+|.-+......+.+..|+..... .+++.....+-...-.......-.-+.++.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~----~IfTNPa~~da~G~L~v~pyH~~hsC~~CP 159 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFS----EIFTNPACVDASGRLLVRPYHTQHSCNLCP 159 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHH----HHhcCCcccCCCCcEEeecCCCCCccCcCc
Confidence 678999999999999997 999999999999999999988764221 011100000000000000000000111121
Q ss_pred h-hhHHHHHHHHhhC-------CCEEEEEcCCccCH-HHHhhCCceEecC
Q 003909 671 P-SHKRMLVEALQNQ-------NEVVAMTGDGVNDA-PALKKADIGIAMG 711 (787)
Q Consensus 671 p-~~K~~~v~~l~~~-------~~~v~~vGDg~ND~-~ml~~A~vgia~~ 711 (787)
+ .=|..++..++.. -+.+..+|||.||. |+++...--+||-
T Consensus 160 sNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 160 SNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 1 1255555555432 23788999999996 5667776667774
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.22 E-value=0.11 Score=47.34 Aligned_cols=90 Identities=21% Similarity=0.304 Sum_probs=60.8
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHH----HHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTA----ESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a----~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
+++=+++.|..-++.|=.++.+|||.+... ..+|+...|.+.. ..+|+.
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~---------------------------pv~f~G 167 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMN---------------------------PVIFAG 167 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCc---------------------------ceeecc
Confidence 455578899999999999999999998754 4456666664321 114444
Q ss_pred cChh-hHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEec
Q 003909 669 VEPS-HKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAM 710 (787)
Q Consensus 669 ~~p~-~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~ 710 (787)
..|. .+..-..++++.+-.+-. ||+.||+.+-+.||+ ||-+
T Consensus 168 dk~k~~qy~Kt~~i~~~~~~IhY-GDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 168 DKPKPGQYTKTQWIQDKNIRIHY-GDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCCcccccccHHHHhcCceEEe-cCCchhhhHHHhcCccceeE
Confidence 3331 223334455666655555 999999999999987 6643
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=93.11 E-value=0.6 Score=46.95 Aligned_cols=81 Identities=20% Similarity=0.222 Sum_probs=53.1
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHH---HHHhCCCCCccccccccccchhhccCChHHHHHhhccceEE
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESI---CHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~---a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (787)
+.+.-|++.+..+.+++.|++|+++|||....-... .++.|+... .. ++
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~----~~------------------------Li 194 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW----EK------------------------LI 194 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc----ce------------------------ee
Confidence 357788999999999999999999999986532222 234566431 01 22
Q ss_pred EecC--------hhhHHHHHHHHhhCCC-EEEEEcCCccCH
Q 003909 667 TRVE--------PSHKRMLVEALQNQNE-VVAMTGDGVNDA 698 (787)
Q Consensus 667 ~~~~--------p~~K~~~v~~l~~~~~-~v~~vGDg~ND~ 698 (787)
.|.. .+.|...-+.+.+.|. +++.+||..+|+
T Consensus 195 LR~~~D~~~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 195 LKDPQDNSAENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred ecCCCCCccchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 2211 1335454455555554 558899999998
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=92.60 E-value=0.8 Score=42.11 Aligned_cols=102 Identities=17% Similarity=0.120 Sum_probs=67.2
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHH---HHHHh-----CCCCCccccccccccch-hhccCChHHHHHhhc
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAES---ICHKI-----GAFDHLVDFVGRSYTAS-EFEELPAMQQTVALQ 661 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~---~a~~~-----gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 661 (787)
|..++++.+..++++++|++++-+|+|+...+.. ..++. ++..... .++.+ .+..+.++
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv-----~~sP~~l~~al~rE------- 93 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPV-----LLSPDSLFSALHRE------- 93 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCE-----EECCcchhhhhhcc-------
Confidence 5899999999999999999999999999766544 33433 3333211 01100 01111111
Q ss_pred cceEEEecChhhHHHHHHHHhhC-----CCEEEEEcCCccCHHHHhhCCce
Q 003909 662 HMALFTRVEPSHKRMLVEALQNQ-----NEVVAMTGDGVNDAPALKKADIG 707 (787)
Q Consensus 662 ~~~v~~~~~p~~K~~~v~~l~~~-----~~~v~~vGDg~ND~~ml~~A~vg 707 (787)
+..+...+.|...++.++.. ..-++++|...+|+.+-+.+|+.
T Consensus 94 ---vi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 94 ---VISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ---ccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 33333446788888888754 34567789999999999888875
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.59 E-value=0.35 Score=48.75 Aligned_cols=93 Identities=11% Similarity=0.079 Sum_probs=57.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++-|++.+++++|++. +++.++|..+.. .+..|+..+.. .++...+.... .-.|
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd----~i~~~~~~~~~----------------KP~p 166 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFE----FVLRAGPHGRS----------------KPFS 166 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhc----eeEecccCCcC----------------CCcH
Confidence 5778999999999975 899999986654 25566644321 11111111000 0112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCC-ccCHHHHhhCCceEec
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDG-VNDAPALKKADIGIAM 710 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg-~ND~~ml~~A~vgia~ 710 (787)
+-=..+++.+.-..+.+++|||+ ..|+.+-+.||+-...
T Consensus 167 ~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 167 DMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 22233344444456789999999 5999999999986543
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.54 E-value=0.62 Score=46.49 Aligned_cols=98 Identities=15% Similarity=0.229 Sum_probs=66.7
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
-++.+++.+++++++++ ++++++|.-.........+++|+....- .++...+ .....
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd----~v~~s~~------------------~g~~K 154 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFD----AVFISED------------------VGVAK 154 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhh----eEEEecc------------------cccCC
Confidence 46788999999999999 9999999998888999999999765431 1111111 11122
Q ss_pred hhhH--HHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCc-eEecC
Q 003909 671 PSHK--RMLVEALQNQNEVVAMTGDGV-NDAPALKKADI-GIAMG 711 (787)
Q Consensus 671 p~~K--~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~v-gia~~ 711 (787)
|..+ ..+.+.+....+.+++|||+. ||+..-+.+|+ +|-+.
T Consensus 155 P~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~ 199 (229)
T COG1011 155 PDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWIN 199 (229)
T ss_pred CCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEEC
Confidence 3222 344444544567899999976 67577788888 44454
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.37 E-value=1 Score=42.60 Aligned_cols=51 Identities=16% Similarity=0.216 Sum_probs=43.2
Q ss_pred EEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH---HHhCCC
Q 003909 582 TFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC---HKIGAF 632 (787)
Q Consensus 582 ~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a---~~~gi~ 632 (787)
.+-|++..++..-|++.+|++.|+.++.+|..+|.-..++-+.+. +++|++
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 467999999999999999999999999999999988777766655 456665
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=91.33 E-value=0.93 Score=40.21 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=29.5
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHH
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE 623 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~ 623 (787)
+++.+++.+++++++++|++++++|||+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 568899999999999999999999999987543
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=90.74 E-value=0.48 Score=48.13 Aligned_cols=42 Identities=7% Similarity=0.064 Sum_probs=39.3
Q ss_pred CC-hhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCC
Q 003909 593 PR-EEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH 634 (787)
Q Consensus 593 ~~-~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~ 634 (787)
+| |++.+++++|+++|++++++|+.....+....+++|+..+
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~Y 188 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRY 188 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcc
Confidence 55 9999999999999999999999999999999999999864
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=90.50 E-value=2.2 Score=45.06 Aligned_cols=47 Identities=17% Similarity=0.183 Sum_probs=35.8
Q ss_pred CcEEEEEeccCC--CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Q 003909 580 DLTFIGLVGMLD--PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH 627 (787)
Q Consensus 580 ~l~~lG~i~~~d--~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~ 627 (787)
|++++-+..--+ .+.++++++|++|. ++..++++|||+......+..
T Consensus 106 DGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 106 DGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred CccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcC
Confidence 555554433333 47899999999999 557999999999998887764
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.09 E-value=0.3 Score=49.39 Aligned_cols=48 Identities=10% Similarity=0.218 Sum_probs=41.2
Q ss_pred EEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHh---CCC
Q 003909 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI---GAF 632 (787)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~---gi~ 632 (787)
|++.-.+++-|++.+++++|+++|++++++|+++..+...+++++ |+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 555566788999999999999999999999999999888877774 663
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=89.60 E-value=1.4 Score=45.67 Aligned_cols=49 Identities=12% Similarity=0.137 Sum_probs=36.5
Q ss_pred EEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHH---HHHHhCCCC
Q 003909 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAES---ICHKIGAFD 633 (787)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~---~a~~~gi~~ 633 (787)
|++.-.+.+-|++.++|++|+++|++++++|+++..+... -.+++|+..
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 3344456778889999999999999999999987554444 345567643
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=87.93 E-value=0.56 Score=44.59 Aligned_cols=86 Identities=14% Similarity=0.236 Sum_probs=56.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++ +++++|.-+........+.+|+.... ..+++.++.... .-.|
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f----d~v~~~~~~~~~----------------KP~p 142 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF----DRAFSVDTVRAY----------------KPDP 142 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH----hhhccHhhcCCC----------------CCCH
Confidence 47889999998 37899999999999999999986542 112222211110 1223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKA 704 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A 704 (787)
+-=..+.+.+.-..+.+++|||+..|+.+-+++
T Consensus 143 ~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 143 VVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 322455566655667899999999999876543
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.18 E-value=3.2 Score=40.51 Aligned_cols=88 Identities=11% Similarity=0.151 Sum_probs=59.5
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHH----HHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEE
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKST----AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~----a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (787)
-.+-|++.+.++...+.|.+|..+|.|..+. +..-.++.|+..... ...++
T Consensus 121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~-------------------------~~~ll 175 (274)
T COG2503 121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLE-------------------------SHLLL 175 (274)
T ss_pred cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccc-------------------------cceEE
Confidence 3577999999999999999999999999886 344456667764210 00122
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhC
Q 003909 667 TRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKA 704 (787)
Q Consensus 667 ~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A 704 (787)
-+ .-..|..-.+.++..-..|+.|||..+|.......
T Consensus 176 kk-~~k~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~~~k 212 (274)
T COG2503 176 KK-DKKSKEVRRQAVEKDYKIVMLVGDNLDDFGDNAYK 212 (274)
T ss_pred ee-CCCcHHHHHHHHhhccceeeEecCchhhhcchhhh
Confidence 21 12334444444555677899999999998765443
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=85.89 E-value=3.2 Score=41.71 Aligned_cols=57 Identities=26% Similarity=0.330 Sum_probs=29.1
Q ss_pred hhhHHHHHHHHhhCC-------CEEEEEcCCccCHHHHhhC------CceEecCCcc-HHHHhhcCeeccC
Q 003909 671 PSHKRMLVEALQNQN-------EVVAMTGDGVNDAPALKKA------DIGIAMGSGT-AVAKSASDMVLAD 727 (787)
Q Consensus 671 p~~K~~~v~~l~~~~-------~~v~~vGDg~ND~~ml~~A------~vgia~~~~~-~~~~~~ad~v~~~ 727 (787)
-..|...++.+-+.. ..++++||...|-.||+.. +++|-++... ......|+|-+.+
T Consensus 163 ~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 163 GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 345888888776553 3688999999999999773 6677787443 4444556766554
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=85.86 E-value=1.7 Score=43.20 Aligned_cols=133 Identities=17% Similarity=0.204 Sum_probs=68.6
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc--cc-hhhccCChHHHHHhhccceEEE
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY--TA-SEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
-.+|+++.+.++.|++.+|.+.++|+.-......+.++.|...+.......-+ +. ..+..+... . +
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~-l--------I-- 157 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGP-L--------I-- 157 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS-------------
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCC-c--------e--
Confidence 46899999999999999999999999999999999888876654322100000 00 000000000 0 0
Q ss_pred ecChhhHHH-------HHHHHhhCCCEEEEEcCCccCHHHHhhC---CceEecC--Ccc-----HHHHhhcCeeccCCCc
Q 003909 668 RVEPSHKRM-------LVEALQNQNEVVAMTGDGVNDAPALKKA---DIGIAMG--SGT-----AVAKSASDMVLADDNF 730 (787)
Q Consensus 668 ~~~p~~K~~-------~v~~l~~~~~~v~~vGDg~ND~~ml~~A---~vgia~~--~~~-----~~~~~~ad~v~~~~~~ 730 (787)
.+-.|-. .-+.++.+ ..|+..||+.-|+.|-.-. +.-+.+| |.. +.-+++-|+|+.++.-
T Consensus 158 --H~~NKn~~~l~~~~~~~~~~~R-~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~t 234 (246)
T PF05822_consen 158 --HTFNKNESALEDSPYFKQLKKR-TNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQT 234 (246)
T ss_dssp ---TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B
T ss_pred --EEeeCCcccccCchHHHHhccC-CcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCC
Confidence 0011111 12223333 4577779999999997555 3333344 332 2345578999987765
Q ss_pred hHHHHHH
Q 003909 731 ATIVAAV 737 (787)
Q Consensus 731 ~~i~~~i 737 (787)
-.++..|
T Consensus 235 m~v~~~i 241 (246)
T PF05822_consen 235 MDVPNAI 241 (246)
T ss_dssp -HHHHHH
T ss_pred chHHHHH
Confidence 5555443
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.15 E-value=1.1 Score=42.45 Aligned_cols=98 Identities=24% Similarity=0.301 Sum_probs=55.0
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhh-----ccceEE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL-----QHMALF 666 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~ 666 (787)
++.+++.+++.+|+++|++++++|.-+ |+-.. .++...+............ -....+
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~rg-------yf~~~~f~~~~~~m~~~l~~~gv~id~i~~ 92 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGRG-------YFTEADFDKLHNKMLKILASQGVKIDGILY 92 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCC-----------Ccccc-------CccHHHHHHHHHHHHHHHHHcCCccceEEE
Confidence 467899999999999999999999632 22110 0111111111000000000 011122
Q ss_pred EecChh--------hHHHHHHHHhhC---CCEEEEEcCCccCHHHHhhCCce
Q 003909 667 TRVEPS--------HKRMLVEALQNQ---NEVVAMTGDGVNDAPALKKADIG 707 (787)
Q Consensus 667 ~~~~p~--------~K~~~v~~l~~~---~~~v~~vGDg~ND~~ml~~A~vg 707 (787)
|--.|+ ....+.+.+++. .....+|||...|+.+-..|++.
T Consensus 93 Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 93 CPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 222222 234445555544 46789999999999999999986
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=84.87 E-value=2.2 Score=43.62 Aligned_cols=41 Identities=7% Similarity=-0.042 Sum_probs=38.0
Q ss_pred ChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCC
Q 003909 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH 634 (787)
Q Consensus 594 ~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~ 634 (787)
.|++.+++++|+++|++++++|+.+...+....+.+|+..+
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~y 190 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGY 190 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcc
Confidence 49999999999999999999998888899999999999764
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=84.85 E-value=0.88 Score=42.69 Aligned_cols=98 Identities=10% Similarity=0.069 Sum_probs=62.6
Q ss_pred cCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 589 MLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 589 ~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
+.=..||++.+.+++|.+. +.+++.|......|..+.+.++....... ..+..+.. ...
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~---~~l~r~~~----------------~~~- 97 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVIS---RRLYRESC----------------VFT- 97 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEe---EEEEcccc----------------EEe-
Confidence 3346899999999999988 99999999999999999999987541110 00000000 000
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 669 VEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
.+. -.+-+..+......|++|||...|..+-+.+++-|.
T Consensus 98 -~~~-~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 98 -NGK-YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred -CCC-EEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 011 001122233445688999999988877666655544
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=84.80 E-value=2.2 Score=47.87 Aligned_cols=40 Identities=18% Similarity=0.283 Sum_probs=33.5
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCH------------HHHHHHHHHhCCC
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNK------------STAESICHKIGAF 632 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~------------~~a~~~a~~~gi~ 632 (787)
+-|++.++|++|+++|++++|+|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999998665 3466778888874
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=83.61 E-value=5.3 Score=42.18 Aligned_cols=107 Identities=13% Similarity=0.128 Sum_probs=68.0
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHh-C-------CCCCccccccccccchh----------hccCCh-
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI-G-------AFDHLVDFVGRSYTASE----------FEELPA- 653 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~-g-------i~~~~~~~~~~~~~~~~----------~~~~~~- 653 (787)
..|++.+.+++|+++|+++.++|+-+...+..+.+.+ | +.... +.++.+.. +..+..
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yF----D~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYF----DVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhC----cEEEeCCCCCcccCCCCceEEEeCC
Confidence 3789999999999999999999999999999999996 6 33322 11221111 000000
Q ss_pred --HHH-H--HhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHh-hCCc
Q 003909 654 --MQQ-T--VALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGV-NDAPALK-KADI 706 (787)
Q Consensus 654 --~~~-~--~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~-~A~v 706 (787)
... . ..+....||+.-+- ..+.+.+...+..|++|||.. .|+-.-+ .+|+
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~---~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSL---KQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGW 317 (343)
T ss_pred CCcccCCccccccCCCeEeCCCH---HHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCc
Confidence 000 0 00122335554433 345566667789999999986 5888776 6776
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=81.03 E-value=57 Score=40.80 Aligned_cols=21 Identities=24% Similarity=0.389 Sum_probs=14.3
Q ss_pred CCeEEEee--cCCCCCCcEEEec
Q 003909 131 NGCFSILP--AAELVPGDIVEVN 151 (787)
Q Consensus 131 ~g~~~~i~--~~~Lv~GDII~l~ 151 (787)
-|..+.+. ..+.+|.|.+.++
T Consensus 249 pGDiv~l~~~~g~~iPaD~~ll~ 271 (1054)
T TIGR01657 249 PGDIVSIPRPEEKTMPCDSVLLS 271 (1054)
T ss_pred CCCEEEEecCCCCEecceEEEEe
Confidence 45666666 6777777777764
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 787 | ||||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 0.0 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 0.0 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 0.0 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 0.0 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 4e-80 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 3e-79 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 4e-77 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 1e-76 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 6e-29 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 3e-21 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 2e-26 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 2e-16 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 2e-16 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 9e-16 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 1e-14 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 1e-14 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 2e-14 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 4e-14 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 5e-14 | ||
| 2voy_H | 48 | Cryoem Model Of Copa, The Copper Transporting Atpas | 4e-12 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 4e-11 | ||
| 2voy_K | 32 | Cryoem Model Of Copa, The Copper Transporting Atpas | 3e-09 | ||
| 2voy_G | 36 | Cryoem Model Of Copa, The Copper Transporting Atpas | 2e-07 | ||
| 2voy_B | 42 | Cryoem Model Of Copa, The Copper Transporting Atpas | 2e-07 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 5e-07 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 5e-07 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 5e-07 | ||
| 3gwi_A | 170 | Crystal Structure Of Mg-Atpase Nucleotide Binding D | 1e-05 | ||
| 1mo7_A | 213 | Atpase Length = 213 | 3e-04 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 4e-04 | ||
| 1q3i_A | 214 | Crystal Structure Of Na,K-Atpase N-Domain Length = | 8e-04 |
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|2VOY|H Chain H, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 48 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2VOY|K Chain K, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 32 | Back alignment and structure |
|
| >pdb|2VOY|G Chain G, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 36 | Back alignment and structure |
|
| >pdb|2VOY|B Chain B, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 42 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|3GWI|A Chain A, Crystal Structure Of Mg-Atpase Nucleotide Binding Domain Length = 170 | Back alignment and structure |
|
| >pdb|1MO7|A Chain A, Atpase Length = 213 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|1Q3I|A Chain A, Crystal Structure Of Na,K-Atpase N-Domain Length = 214 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 787 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 0.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 4e-35 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 2e-32 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 8e-31 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 3e-28 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 2e-08 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-27 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 6e-10 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-27 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-26 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-11 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-11 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 1e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-06 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 1e-06 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 1e-05 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 4e-05 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 5e-05 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 6e-05 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 7e-05 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 2e-04 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 2e-04 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 4e-04 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 4e-04 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 5e-04 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 5e-04 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 8e-04 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 9e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 1088 bits (2816), Expect = 0.0
Identities = 445/806 (55%), Positives = 559/806 (69%), Gaps = 28/806 (3%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A+++S E L +FGV T GLT QV RH+ YG N LP E+ + W+LV++QF+DL
Sbjct: 2 MEAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDL 61
Query: 61 LVKILIAAAVISFFLALI-NGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELR 119
LV+IL+ AA ISF LA GE +TAF+EP VILLIL ANA VGV E NAE A+E L+
Sbjct: 62 LVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALK 121
Query: 120 AYQADIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAIL 177
Y+ ++ V R S+ + A ++VPGDIVEV VG K+PAD+R++ + S LRVDQ+IL
Sbjct: 122 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSIL 181
Query: 178 TGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSML 237
TGES SV K + + AV QDK N+LFSGT + AG+A +V G +T +G IRD M
Sbjct: 182 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMA 241
Query: 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAV 296
TE + TPL++KLDEFG L+KVI+ ICV VW++NIGHF DP HGG ++RGAI+YFKIAV
Sbjct: 242 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAV 301
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
ALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLGCT+VICSDKTGTLTTN
Sbjct: 302 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 361
Query: 357 MSVAKICVVHSVQQGPI-IAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSA 415
MSV K+ ++ V + E+ +TG+TYAPEG V + + Q L+ +A A
Sbjct: 362 MSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKND--KPIRSGQFDGLVELATICA 419
Query: 416 LCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475
LCN+S L +N KG YEK+GEATE AL L EK+ + + + LSK ERA+ CN
Sbjct: 420 LCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVF-----NTEVRNLSKVERANACNS 474
Query: 476 HWEIEFKKVSILEFSRDRKMMSVLCSHKQ------MCVMFSKGAPESVLSRCTNILCNDN 529
KK LEFSRDRK MSV CS + MF KGAPE V+ RC +
Sbjct: 475 VIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTT 534
Query: 530 GFIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EKDL 581
VPMT ++ ++ S + G++ LRCLALA + P R+ + DD E DL
Sbjct: 535 --RVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDL 592
Query: 582 TFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGR 641
TF+G+VGMLDPPR+EV ++ C AGIRVI++TGDNK TA +IC +IG F + R
Sbjct: 593 TFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 652
Query: 642 SYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPAL 701
+YT EF++LP +Q A + F RVEPSHK +VE LQ+ +E+ AMTGDGVNDAPAL
Sbjct: 653 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 712
Query: 702 KKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGE 761
KKA+IGIAMGSGTAVAK+AS+MVLADDNF+TIVAAV EGRAIYNN KQFIRY+ISSN+GE
Sbjct: 713 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGE 772
Query: 762 VVCIFVAAVLGIPDTLAPVSLISVNI 787
VVCIF+ A LG+P+ L PV L+ VN+
Sbjct: 773 VVCIFLTAALGLPEALIPVQLLWVNL 798
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 826 bits (2137), Expect = 0.0
Identities = 235/829 (28%), Positives = 364/829 (43%), Gaps = 102/829 (12%)
Query: 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLV 62
+ + SV E+ + TKGL+ S A + G N L + T + +Q L
Sbjct: 52 NDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQ 111
Query: 63 KILIAAAVISFFLALINGETGLTA----FLEPSVILLILAANAAVGVITETNAEKALEEL 118
++ AA I I G ++ ++ G E + +
Sbjct: 112 CLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASF 171
Query: 119 RAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILT 178
+ ATV+R+G + A +LV GD+VE+ G ++PAD+R+++ + +VD + LT
Sbjct: 172 KNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQ--AQGRKVDNSSLT 229
Query: 179 GESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238
GES + + T+ + NI F T+ + G A+ +VV G T +G I
Sbjct: 230 GESEPQTRSPE---CTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASG 286
Query: 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRG--AIHYFKIAV 296
E+E TP+ +++ F +A + +IV G + +
Sbjct: 287 VENEKTPIAIEIEHFVDIIAGLAILFGATFFIV-----------AMCIGYTFLRAMVFFM 335
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
A+ VA +PEGL A VT CL+L KR+A N +V++L +VETLG T+VICSDKTGTLT N
Sbjct: 336 AIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNR 395
Query: 357 MSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSAL 416
M+V+ + + + + T F + R L
Sbjct: 396 MTVSHLWFDNHI--------HSADTTEDQSGQ----------TFDQSSETWRALCRVLTL 437
Query: 417 CNESVLQYNPDKGNYEK---IGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYC 473
CN + + D K IG+A+E AL +E + R +
Sbjct: 438 CNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGN------------AMGYRERF- 484
Query: 474 NHHWEIEFKKVSILEFSRDRKMMSVLC----SHKQMCVMFSKGAPESVLSRCTNILCNDN 529
KV + F+ K + V+ KGAPE VL RC++IL
Sbjct: 485 --------PKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSIL--IK 534
Query: 530 GFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDD--------EKDL 581
G +P+ R ++ SL G R L + Y L
Sbjct: 535 GQELPLDEQWREAFQTAYLSLGG-LGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGL 593
Query: 582 TFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGR 641
+F GLV M+DPPR V +A+L C TAGIRVI+VTGD+ TA++I +G + V
Sbjct: 594 SFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVED 653
Query: 642 SYTASEF-----------------EELPAM-----QQTVALQHMALFTRVEPSHKRMLVE 679
+L M + + +F R P K ++VE
Sbjct: 654 IAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVE 713
Query: 680 ALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVA 738
+ Q +VA+TGDGVND+PALKKADIG+AMG +G+ AK+A+DM+L DDNFA+IV V
Sbjct: 714 SCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVE 773
Query: 739 EGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787
+GR I++N K+ I Y ++ NI E+ + + +P L ++++ + +
Sbjct: 774 QGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIEL 822
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 793 bits (2050), Expect = 0.0
Identities = 240/829 (28%), Positives = 371/829 (44%), Gaps = 102/829 (12%)
Query: 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLV 62
D + S+ E+ + +G D T+GLT+++ + G N L T W +Q
Sbjct: 47 DDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFS 106
Query: 63 KILIAAAVISFFLALINGETGLTAFL----EPSVILLILAANAAVGVITETNAEKALEEL 118
+L A++ F I T V+ ++ E + + ++
Sbjct: 107 ILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSF 166
Query: 119 RAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILT 178
+ A V+R+G S + A +V GD+VEV G +IPAD+R+I ++ +VD + LT
Sbjct: 167 KNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIIS--AHGCKVDNSSLT 224
Query: 179 GESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238
GES + + ++ + NI F T V G AR VVV G T MG I
Sbjct: 225 GESEPQTRSPE---FSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASG 281
Query: 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRG--AIHYFKIAV 296
E TP+ +++ F + V + V +I+ + G + +
Sbjct: 282 LEVGRTPIAIEIEHFIHIITGVAVFLGVSFFIL-----------SLILGYSWLEAVIFLI 330
Query: 297 ALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNM 356
+ VA +PEGL A VT CL L KRMAR N +V++L +VETLG T+ ICSDKTGTLT N
Sbjct: 331 GIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNR 390
Query: 357 MSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSAL 416
M+VA + + + T F ++R +AL
Sbjct: 391 MTVAHMWFDNQ--------IHEADTTENQSGA----------AFDKTSATWSALSRIAAL 432
Query: 417 CNESVLQYNPDKGNYEK---IGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYC 473
CN +V Q D K G+A+E AL E + R
Sbjct: 433 CNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGS------------VQGMRDRN- 479
Query: 474 NHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMC----VMFSKGAPESVLSRCTNILCNDN 529
K+ + F+ K + +++ ++ KGAPE +L RC+ IL N
Sbjct: 480 --------PKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTIL--LN 529
Query: 530 GFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSY--------DDEKDL 581
G P+ +++ ++ L G R L +P ++ Y DL
Sbjct: 530 GAEEPLKEDMKEAFQNAYLELGG-LGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDL 588
Query: 582 TFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGR 641
F+GL+ M+DPPR V +A+ C +AGI+VI+VTGD+ TA++I +G + +
Sbjct: 589 CFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIED 648
Query: 642 SYTASEF-----------------EELPAM-----QQTVALQHMALFTRVEPSHKRMLVE 679
+L + + +F R P K ++VE
Sbjct: 649 IAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVE 708
Query: 680 ALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVA 738
Q Q +VA+TGDGVND+PALKKADIG+AMG SG+ V+K A+DM+L DDNFA+IV V
Sbjct: 709 GCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVE 768
Query: 739 EGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787
EGR I++N K+ I Y ++SNI E+ V + +P L V+++ +++
Sbjct: 769 EGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNVPLPLGTVTILCIDL 817
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 657 bits (1697), Expect = 0.0
Identities = 199/788 (25%), Positives = 333/788 (42%), Gaps = 118/788 (14%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
D + EV +GLT + ++I+G N L ++K + K L +
Sbjct: 11 TVDLEKIPIEEVFQQLKCSR-EGLTTQEGEDRIQIFGPNKLEEKKESKLLKF-LGFMWNP 68
Query: 61 LVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRA 120
L ++ AA+++ LA +G + + I+ +L N+ + I E NA A L A
Sbjct: 69 LSWVMEMAAIMAIALANGDGRPPD--WQDFVGIICLLVINSTISFIEENNAGNAAAALMA 126
Query: 121 YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGE 180
A VLR+G +S AA LVPGDIV + +G IPAD R++E + L+VDQ+ LTGE
Sbjct: 127 GLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLE--GDPLKVDQSALTGE 184
Query: 181 SCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240
S V K +FSG+ G AVV+ G +T G ++ +
Sbjct: 185 SLPVTKHPG-------------QEVFSGSTCKQGEIEAVVIATGVHTFFGKAA-HLVDST 230
Query: 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300
++V +K L G F IA V+ IV + + + G + L +
Sbjct: 231 NQVGHFQKVLTAIGNFCICSIAIGMVIEIIV-MYPIQ---RRKYRDG----IDNLLVLLI 282
Query: 301 AAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVA 360
IP +P V++ +A+G+ R+++ AI + + ++E + V+CSDKTGTLT N +SV
Sbjct: 283 GGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVD 342
Query: 361 KICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNES 420
K V V + V+ +A+ +
Sbjct: 343 KNLV-------------EVFCKGVEKDQVL---------------------LFAAMAS-- 366
Query: 421 VLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIE 480
+ +A + A+ + ML+ + A
Sbjct: 367 ----------RVENQDAIDAAM------------------VGMLADPKEA-------RAG 391
Query: 481 FKKVSILEFSRDRKMMSVLCSHKQ-MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANI 539
++V L F+ K ++ SKGAPE +L + ++
Sbjct: 392 IREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELA------------KASNDL 439
Query: 540 RAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKN 599
++ S ++ A + LR LA+A + +P + F+GL+ + DPPR +
Sbjct: 440 SKKVLSIIDKYA-ERGLRSLAVARQVVP---EKTKESPGAPWEFVGLLPLFDPPRHDSAE 495
Query: 600 AMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVA 659
+ + G+ V ++TGD + + ++G ++ + L ++
Sbjct: 496 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-SSALLGTHKDANLASIPVEEL 554
Query: 660 LQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKS 719
++ F V P HK +V+ LQ + +V MTGDGVNDAPALKKADIGIA+ T A+
Sbjct: 555 IEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARG 614
Query: 720 ASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAP 779
ASD+VL + + I++AV RAI+ K + Y +S I V + A++ +
Sbjct: 615 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIW-EFDFSA 673
Query: 780 VSLISVNI 787
++ + I
Sbjct: 674 FMVLIIAI 681
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 640 bits (1652), Expect = 0.0
Identities = 198/784 (25%), Positives = 332/784 (42%), Gaps = 126/784 (16%)
Query: 4 AYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVK 63
R V E D D GLT +V + R YG N + +EK F K L F +
Sbjct: 70 GGGRVVPE--DMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEKENHFLKF-LGFFVGPIQF 126
Query: 64 ILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQA 123
++ AAV++ L + +++ VI +L NA VG + E A ++EL+ A
Sbjct: 127 VMEGAAVLAAGL----ED-----WVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLA 177
Query: 124 DIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCS 183
A VLR+G + A E+VPGDI++V G IPAD R++ + L+VDQ+ LTGES +
Sbjct: 178 LKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAF-LQVDQSALTGESLA 236
Query: 184 VEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEV 243
V+K K + +F+ + V G A V+ G NT +G +
Sbjct: 237 VDK-------------HKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGS 283
Query: 244 TPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAI 303
+ L+ GT L ++ ++VW+ + +R ++ + +A+ + +
Sbjct: 284 GHFTEVLNGIGTILLILVIFTLLIVWVSSF--YR---SNPIVQI----LEFTLAITIIGV 334
Query: 304 PEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKIC 363
P GLPAVVTT +A+G +A+ AIV+ L ++E+L ++CSDKTGTLT N +S+
Sbjct: 335 PVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPY 394
Query: 364 VVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQ 423
V V PE ++ + L
Sbjct: 395 TVAGVD----------------PEDLM---------------------LTACLAASRK-- 415
Query: 424 YNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKK 483
+K +A + A + P A ++LSK++ F
Sbjct: 416 --------KKGIDAIDKAFLKSLKY--------YPRAKSVLSKYKVLQ------FHPFD- 452
Query: 484 VSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAEL 543
+K+++V+ S + + KGAP VL P+ +
Sbjct: 453 ------PVSKKVVAVVESPQGERITCVKGAPLFVLKTVEE--------DHPIPEEVDQAY 498
Query: 544 ESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLS 603
++++ A R L +A K E +G++ +DPPR + +
Sbjct: 499 KNKVAEFA-TRGFRSLGVARK-----------RGEGSWEILGIMPCMDPPRHDTYKTVCE 546
Query: 604 CMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHM 663
T G+ + ++TGD A ++G ++ + ++P + ++
Sbjct: 547 AKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYN--AERLGLGGGGDMPGSEVYDFVEAA 604
Query: 664 ALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM 723
F V P HK +VE LQ + +VAMTGDGVNDAP+LKKAD GIA+ + A+SA+D+
Sbjct: 605 DGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADI 664
Query: 724 VLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLI 783
V I+ A+ R I++ ++ Y I+ +I + + + +L ++
Sbjct: 665 VFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEI-FLGLWIAILNRSLNIELVV 723
Query: 784 SVNI 787
+ I
Sbjct: 724 FIAI 727
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 4e-35
Identities = 32/162 (19%), Positives = 66/162 (40%), Gaps = 27/162 (16%)
Query: 434 IGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDR 493
+ + A+ ++ S ++K+ + F +R
Sbjct: 32 LKNLLDTAVLEGTDEESARSLAS-----------------------RWQKIDEIPFDFER 68
Query: 494 KMMSVLCS-HKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAG 552
+ MSV+ + + + + KGA + +L+ C+ + NG IVP+ + +++ ++L
Sbjct: 69 RRMSVVVAENTEHHQLVCKGALQEILNVCSQVR--HNGEIVPLDDIMLRKIKRVTDTLN- 125
Query: 553 KEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPR 594
++ LR +A+A K +P DE DL G + LD
Sbjct: 126 RQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHHH 167
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 2e-32
Identities = 35/170 (20%), Positives = 74/170 (43%), Gaps = 31/170 (18%)
Query: 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFV 639
+ I + D PR +K+ + G+++I+++GD + + + ++ +
Sbjct: 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN-----IQEY 178
Query: 640 GRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAP 699
++ + P K ++E L+ V M GDGVNDA
Sbjct: 179 --------------------------YSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAA 212
Query: 700 ALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQ 749
AL AD+ +AMG+G ++K+ +D++L ++ T++ + + + N
Sbjct: 213 ALALADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPS 262
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 8e-31
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 32/170 (18%)
Query: 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFV 639
+ G++ + D R E + A+ GI+ +++TGDN+ A+ + ++G +D
Sbjct: 132 NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG-----LDDY 186
Query: 640 GRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAP 699
F V P K V+ +Q Q V AM GDGVNDAP
Sbjct: 187 --------------------------FAEVLPHEKAEKVKEVQ-QKYVTAMVGDGVNDAP 219
Query: 700 ALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQ 749
AL +AD+GIA+G+GT VA +D+VL ++ + A V R Y+
Sbjct: 220 ALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHG 269
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 3e-28
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFV 639
D + L+ + DP + +L +GI ++++TGD+K TAE++ +G + V
Sbjct: 542 DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLG-----IKKV 596
Query: 640 GRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAP 699
+ P K +V L+++ +VAM GDGVNDAP
Sbjct: 597 --------------------------VAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAP 630
Query: 700 ALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQ 749
AL KADIGIAMG+GT VA ++ + L + I A + +N +Q
Sbjct: 631 ALAKADIGIAMGTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQ 680
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 56.8 bits (138), Expect = 2e-08
Identities = 58/264 (21%), Positives = 100/264 (37%), Gaps = 70/264 (26%)
Query: 114 ALEELRAYQADIAT-VLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRV 172
A+ L + A + +G + + GD++ V G KIP D + E S V
Sbjct: 215 AIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF---V 271
Query: 173 DQAILTGESCSVEKEL-DSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGS 231
D++++TGE V KE +I T+ G + VG++T +
Sbjct: 272 DESMVTGEPIPVAKEASAKVIG--------------ATINQTGSFVMKALHVGSDTMLAR 317
Query: 232 I----------RDSMLQTEDEVTPLKKKLDEFGTFLAKV--IAGICVLVWIVNIGHFRDP 279
I R + + D V+ G F+ V +A + +VW + +G
Sbjct: 318 IVQMVSDAQRSRAPIQRLADTVS---------GWFVPAVILVAVLSFIVWAL-LGPQPAL 367
Query: 280 SHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG----------TKRMARLNAIV 329
S+G AV++ + A P C ALG + A+ ++
Sbjct: 368 SYG---------LIAAVSVLIIACP---------C-ALGLATPMSIMVGVGKGAQSGVLI 408
Query: 330 RSLPSVETLGCTTVICSDKTGTLT 353
++ ++E + + DKTGTLT
Sbjct: 409 KNAEALERMEKVNTLVVDKTGTLT 432
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 1e-27
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 32/170 (18%)
Query: 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFV 639
+ G++ + D +E K A+ GI+V ++TGDN +AE+I ++ +D V
Sbjct: 445 NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN-----LDLV 499
Query: 640 GRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAP 699
V P K V+ LQ + EVVA GDG+NDAP
Sbjct: 500 --------------------------IAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAP 532
Query: 700 ALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQ 749
AL +AD+GIA+GSG+ VA + D+VL D+ +VAA+ R + KQ
Sbjct: 533 ALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQ 582
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 6e-10
Identities = 62/263 (23%), Positives = 98/263 (37%), Gaps = 70/263 (26%)
Query: 114 ALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVD 173
A+++L QA A V+R+G +P E+ GDIV V G KIP D ++E S VD
Sbjct: 123 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY---VD 179
Query: 174 QAILTGESCSVEKEL-DSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSI 232
+++++GE V K D + T+ G + VG T + I
Sbjct: 180 ESMISGEPVPVLKSKGDEVFG--------------ATINNTGVLKIRATRVGGETLLAQI 225
Query: 233 ----------RDSMLQTEDEVTPLKKKLDEFGTFLAKV--IAGICVLVWIVNIGHFRDPS 280
+ + + D+V F+ V +A + W I H
Sbjct: 226 VKLVEDAMGSKPPIQRLADKVV---------AYFIPTVLLVAISAFIYWYF-IAH----- 270
Query: 281 HGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG----------TKRMARLNAIVR 330
+ F +A+ V A P C A G + A L +++
Sbjct: 271 -----APLLFAFTTLIAVLVVACP---------C-AFGLATPTALTVGMGKGAELGILIK 315
Query: 331 SLPSVETLGCTTVICSDKTGTLT 353
+ ++E T + DKTGTLT
Sbjct: 316 NADALEVAEKVTAVIFDKTGTLT 338
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 2e-27
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 32/169 (18%)
Query: 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFV 639
+ G++ + D +E K A+ GI+V ++TGDN +AE+I ++ +D V
Sbjct: 151 NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN-----LDLV 205
Query: 640 GRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAP 699
V P K V+ LQ + VVA GDG+NDAP
Sbjct: 206 --------------------------IAEVLPHQKSEEVKKLQAKE-VVAFVGDGINDAP 238
Query: 700 ALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTK 748
AL +AD+GIA+GSG+ VA + D+VL D+ +VAA+ R + K
Sbjct: 239 ALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 3e-26
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 32/170 (18%)
Query: 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFV 639
+ G++ + D +E K A+ GI+V ++TGDN +AE+I ++ +D V
Sbjct: 523 NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN-----LDLV 577
Query: 640 GRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAP 699
V P K V+ LQ + EVVA GDG+NDAP
Sbjct: 578 --------------------------IAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAP 610
Query: 700 ALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQ 749
AL +AD+GIA+GSG+ VA + D+VL D+ +VAA+ R + KQ
Sbjct: 611 ALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQ 660
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 66.0 bits (162), Expect = 3e-11
Identities = 75/326 (23%), Positives = 127/326 (38%), Gaps = 67/326 (20%)
Query: 59 DLLVKILIAAAVISFFLALINGETGLTAFLEPS--VILLILAANAAVGVITETNAE---- 112
D++ + + AA ++ L+ +F E S ++ +L +G E A+
Sbjct: 145 DVMYSMGVGAAFLASVLSTAGVLPREYSFYETSVLLLAFLL-----LGRTLEARAKSRTG 199
Query: 113 KALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRV 172
+A+++L QA A V+R+G +P E+ GDIV V G KIP D ++E S V
Sbjct: 200 EAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY---V 256
Query: 173 DQAILTGESCSVEKEL-DSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGS 231
D+++++GE V K D + T+ G + VG T +
Sbjct: 257 DESMISGEPVPVLKSKGDEVFG--------------ATINNTGVLKIRATRVGGETLLAQ 302
Query: 232 IRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICV-----------LVWIVNIGHFRDPS 280
I + P+++ LA + + + W I H
Sbjct: 303 IVKLVEDAMGSKPPIQR--------LADKVVAYFIPTVLLVAISAFIYWYF-IAH----- 348
Query: 281 HGGFLRGAIHYFKIAVALAVAAIP--EGL--PAVVTTCLALGTKRMARLNAIVRSLPSVE 336
+ F +A+ V A P GL P T L +G + A L ++++ ++E
Sbjct: 349 -----APLLFAFTTLIAVLVVACPCAFGLATP----TALTVGMGKGAELGILIKNADALE 399
Query: 337 TLGCTTVICSDKTGTLTTNMMSVAKI 362
T + DKTGTLT V +
Sbjct: 400 VAEKVTAVIFDKTGTLTKGKPEVTDL 425
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 60.2 bits (147), Expect = 2e-11
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 114 ALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVD 173
A+++L QA A V+R+G +P E+ GDIV V G KIP D ++E S VD
Sbjct: 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY---VD 58
Query: 174 QAILTGESCSVEKEL-DSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSI 232
+++++GE V K D + T+ G + VG T + I
Sbjct: 59 ESMISGEPVPVLKSKGDEVFG--------------ATINNTGVLKIRATRVGGETLLAQI 104
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 52.5 bits (127), Expect = 1e-08
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 114 ALEELRAYQADIATVLRNGCFSIL------PAAELVPGDIVEVNVGCKIPADMRMIEMLS 167
AL +L + QA AT++ +IL + GDI++V G K P D R+IE S
Sbjct: 8 ALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS 67
Query: 168 NQLRVDQAILTGESCSVEKEL-DSIIA 193
VD++++TGE+ V K+ ++IA
Sbjct: 68 M---VDESLITGEAMPVAKKPGSTVIA 91
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.1 bits (129), Expect = 2e-07
Identities = 73/484 (15%), Positives = 147/484 (30%), Gaps = 138/484 (28%)
Query: 367 SVQQGPIIAEYGVTG---TTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQ 423
++ + GV G T A + V S +Q + ++ L++ C+ E+VL+
Sbjct: 146 ELRPAKNVLIDGVLGSGKTWVALD--VCLSYKVQCKMDFKI-FWLNLKNCN--SPETVLE 200
Query: 424 ------YNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCN--- 474
Y D + ++ + LR S+ + L L K + Y N
Sbjct: 201 MLQKLLYQIDPNWTSRSDHSSNIKLR----------IHSIQAELRRLLKSKP--YENCLL 248
Query: 475 ------HHWEIE-FK-KVSILEFSRDRKMMSVLCSHK-------QMCVMFSKGAPESVLS 519
+ F IL +R +++ L + + + +S+L
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308
Query: 520 RCTNILCND--------NGFIVPMTA------NIRAE-------------LESRLNSLAG 552
+ + D N + + A + +ES LN L
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEP 368
Query: 553 KEALRC---LALALKQMPINRQTLSYDDEKDLTFIGLVGML--DPPREEVKNAMLSCMTA 607
E + L++ I LS ++ D + +V +
Sbjct: 369 AEYRKMFDRLSVFPPSAHIPTILLS--------------LIWFDVIKSDVMVVVNKLHKY 414
Query: 608 GIRVIVVTGDNKSTAESICHKIGAFD-----------H--LVDF--VGRSYTASEFEELP 652
+V K + SI I + H +VD + +++ + +
Sbjct: 415 S----LVEKQPKESTISI-PSI-YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY 468
Query: 653 A-----------MQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPAL 701
++ + M LF V R L + +++ + +G +N L
Sbjct: 469 LDQYFYSHIGHHLKNIEHPERMTLFRMVFLDF-RFLEQKIRHDSTAWNASGSILNTLQQL 527
Query: 702 KKADIGIAMGSGTA----------VAKSASDMVLADDNFATIV--AAVAEGRAIYNNT-K 748
K I + K +++ + + ++ A +AE AI+ K
Sbjct: 528 KFYKPYICDNDPKYERLVNAILDFLPKIEENLICSK--YTDLLRIALMAEDEAIFEEAHK 585
Query: 749 QFIR 752
Q R
Sbjct: 586 QVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.8 bits (123), Expect = 9e-07
Identities = 67/425 (15%), Positives = 125/425 (29%), Gaps = 153/425 (36%)
Query: 391 FDSSGIQLEF--PAQLPCLLHIARCSALCNESVL--QYN---PDKGNYEKIGEATEVALR 443
F S I+ E P+ + ++I + L N++ + +YN Y K+ +A L
Sbjct: 93 FLMSPIKTEQRQPS-MMTRMYIEQRDRLYNDNQVFAKYNVSRLQP--YLKLRQA----LL 145
Query: 444 VL--AEKVGLPGFDSMP----S--ALNMLSKH--ERASYCNHHWEIEFKKVSILEFSRDR 493
L A+ V + G + + AL++ + + W L
Sbjct: 146 ELRPAKNVLIDG---VLGSGKTWVALDVCLSYKVQCKMDFKIFW---------LNLKNCN 193
Query: 494 KMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGK 553
+VL E + I N +NI+ + S +
Sbjct: 194 SPETVL---------------EMLQKLLYQIDPNWTSRSDHS-SNIKLRIHS------IQ 231
Query: 554 EALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAM-LSCMTAGIRVI 612
LR L LK P L + ++ + NA LSC +++
Sbjct: 232 AELRRL---LKSKPYENCLLVLLNVQN--------------AKAWNAFNLSC-----KIL 269
Query: 613 VVTGDNKSTAESICHKIGAFDHL-VDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671
+ T K + + H+ +D + T E + L + + P
Sbjct: 270 LTTRF-KQVTDFL--SAATTTHISLDHHSMTLTPDEVKSL-----------LLKYLDCRP 315
Query: 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFA 731
D P + + L+
Sbjct: 316 Q------------------------DLPRE---------------VLTTNPRRLS----- 331
Query: 732 TIVAAVAEGRAIYNNTKQF----IRYMISSNI-----GEVVCIFVAAVLGI--PDTLAPV 780
I ++ +G A ++N K + +I S++ E +F L + P P
Sbjct: 332 IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR--LSVFPPSAHIPT 389
Query: 781 SLISV 785
L+S+
Sbjct: 390 ILLSL 394
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 7e-06
Identities = 61/421 (14%), Positives = 117/421 (27%), Gaps = 160/421 (38%)
Query: 420 SVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFD--SMPSAL-NMLSKHERASYCNHH 476
QY Y+ I L V + + FD + ++LSK E +H
Sbjct: 12 GEHQYQ-----YKDI-------LSVFEDAF-VDNFDCKDVQDMPKSILSKEE----IDH- 53
Query: 477 WEIEFKKVSIL----EFSRDRKMMSVLCSHKQMCV-MFSKGA------------------ 513
I+ S ++ L S ++ V F +
Sbjct: 54 ---------IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ 104
Query: 514 ---PESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINR 570
+ + L NDN + R + +L ++AL L L+
Sbjct: 105 PSMMTRMYIEQRDRLYNDNQVFAKYNVS-RLQPYLKL-----RQAL----LELRPAK--- 151
Query: 571 QTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKST-AESIC--H 627
+ + G+ G G K+ A +C +
Sbjct: 152 ------------NVLIDGV-----------------LGS------G--KTWVALDVCLSY 174
Query: 628 KI-GAFDHLVDF---VGRSYTASEFEELPAMQQTVALQHMALFT-RVEPS---------- 672
K+ D + F + + E + M Q + Q +T R + S
Sbjct: 175 KVQCKMDFKI-FWLNLKNCNSP---ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 673 --HKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNF 730
R L+++ +N ++ + V +A A ++ K +L F
Sbjct: 231 QAELRRLLKSKPYENCLLVL--LNVQNAKAWNAFNLS---------CK-----ILLTTRF 274
Query: 731 ATIVAAVAEGRAIYNNTKQFIRYMISSNIG----EVVCIFVAAVLGI-PDTLAPVSLISV 785
+ + + + ++ EV + L P L P +++
Sbjct: 275 KQVTDFL-------SAATTTHISLDHHSMTLTPDEVKSLL-LKYLDCRPQDL-PREVLTT 325
Query: 786 N 786
N
Sbjct: 326 N 326
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 1e-06
Identities = 20/122 (16%), Positives = 32/122 (26%), Gaps = 15/122 (12%)
Query: 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLV----DFVGRSYTASE 647
RE + + I V++G + I D + F
Sbjct: 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 136
Query: 648 FEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG 707
K ++ L N+ + M GD V D A K +D+
Sbjct: 137 PHSCKGTCSNQCGCC-----------KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLC 185
Query: 708 IA 709
A
Sbjct: 186 FA 187
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 683 NQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDN 729
+E++ + GD ND P + + T K+ SD V
Sbjct: 168 EYDEILVI-GDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSY 213
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A Length = 258 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 4e-05
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 675 RMLVEALQ-NQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMV 724
RM++E L ++ +V A GDG+ND L G+AMG+ K +D V
Sbjct: 189 RMMIEKLGIDKKDVYAF-GDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFV 238
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 Length = 301 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 5e-05
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 683 NQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739
+ ++V+ + GD ND L A+ + T AKS + VL + VA + +
Sbjct: 239 SNDQVLVV-GDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 294
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A Length = 261 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 6e-05
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 675 RMLVEALQ-NQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMV 724
++ E ++ GDG ND L+ A IG+AMG K+A+D V
Sbjct: 193 DEIIRHFGIKLEETMSF-GDGGNDISMLRHAAIGVAMGQAKEDVKAAADYV 242
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 7e-05
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 684 QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDN 729
EV + GDG ND A K +A+ + K +D V +
Sbjct: 169 PKEVAHV-GDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEY 213
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} Length = 274 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 683 NQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDN 729
Q E + GDG ND + +D+ IAM + K + + +D
Sbjct: 215 TQKETICF-GDGQNDIVMFQASDVTIAMKNSHQQLKDIATSI-CEDI 259
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} Length = 268 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 2e-04
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 675 RMLVEALQ-NQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMV 724
+ + + +E++A GDG ND P LK A IG+AMG+ + +S +D V
Sbjct: 200 SLFADYYRVKVSEIMAC-GDGGNDIPMLKAAGIGVAMGNASEKVQSVADFV 249
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} Length = 279 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 4e-04
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 684 QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDN 729
++V+ + GD ND +K A +G+AMG+ K A+ V N
Sbjct: 213 ADDVMTL-GDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAV-TLTN 256
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} Length = 289 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 4e-04
Identities = 16/122 (13%), Positives = 36/122 (29%), Gaps = 19/122 (15%)
Query: 627 HKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRML--------- 677
+K + D + E++ + +P +
Sbjct: 153 YKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGK 212
Query: 678 ---VEALQNQ-----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDN 729
V + + +A GD ND L+ G + + T AK+ +++ D
Sbjct: 213 NEIVTFMLEKYNLNTERAIAF-GDSGNDVRMLQTVGNGYLLKNATQEAKNLHNLI-TDSE 270
Query: 730 FA 731
++
Sbjct: 271 YS 272
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 Length = 282 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 5e-04
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 675 RMLVEALQ-NQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDN 729
+ L + L E++A+ GD ND ++ A +G+A+ + K ++ V +
Sbjct: 204 KSLADVLGIKPEEIMAI-GDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNL 258
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 5e-04
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 671 PSHKRMLVEALQNQNE-VVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADD 728
KR V A ++ V+A GD ND L +A GI + V +
Sbjct: 131 KDPKRQSVIAFKSLYYRVIAA-GDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHT 188
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} Length = 290 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 8e-04
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 683 NQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMV 724
+ ++VVA+ G +D P ++ A +G+AMG+ K +D V
Sbjct: 217 SMDDVVAI-GHQYDDLPMIELAGLGVAMGNAVPEIKRKADWV 257
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A Length = 279 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 9e-04
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 684 QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDN 729
+ EV+A+ GDG ND +K A +G+AMG+ K A+D + N
Sbjct: 213 REEVIAI-GDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYI-TLTN 256
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 787 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.92 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.93 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.93 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.92 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.91 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.71 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.55 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.53 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.51 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.46 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.44 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.42 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.41 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.41 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.41 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.38 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.37 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.36 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.34 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.33 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.33 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.32 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.31 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.28 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.27 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.25 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.22 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.19 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.17 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.16 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.14 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.11 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.11 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.1 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.1 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.08 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.07 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.06 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.05 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.04 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.01 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.99 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.99 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.92 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.92 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.84 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.83 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.82 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.79 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.78 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.77 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.72 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.7 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.68 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.67 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.65 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.59 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.58 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.54 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.53 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.51 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.5 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.49 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.49 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.48 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 98.47 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.46 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.45 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.44 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.4 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.38 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.37 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.36 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.35 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.35 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.35 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.34 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.33 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.32 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.32 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.3 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.26 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.26 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.25 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.25 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.23 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.21 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.21 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.2 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.19 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.19 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.19 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.19 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.18 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.18 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.17 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.16 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.12 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 98.11 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.1 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.09 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 98.06 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 98.06 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 98.05 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 98.04 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.03 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.0 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.98 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.94 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.93 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.93 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.9 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.8 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.75 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.74 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.69 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.62 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.59 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.49 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 97.49 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.48 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.47 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.34 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 97.34 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.3 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 97.2 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 97.18 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 97.05 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 97.03 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 96.88 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.82 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.66 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 96.61 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.59 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 96.47 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 96.37 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 96.29 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 96.17 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.01 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 95.48 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 95.29 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 95.28 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 95.18 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 94.28 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 93.97 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 92.98 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 90.89 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 89.69 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 89.4 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 87.97 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 87.67 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 87.06 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 86.92 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 86.32 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 85.85 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 81.46 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-114 Score=1038.47 Aligned_cols=777 Identities=56% Similarity=0.872 Sum_probs=654.5
Q ss_pred CcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcC
Q 003909 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (787)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (787)
|++||..+++|+++.|++|+.+|||++|+++|+++||+|+++.++++++|+.+++||+++++++++++++++++++++..
T Consensus 2 ~~~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~ 81 (995)
T 3ar4_A 2 MEAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEE 81 (995)
T ss_dssp CTTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCC
T ss_pred cchhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 89999999999999999999999999999999999999999998888999999999999999999999999988876531
Q ss_pred C-CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCe--EEEeecCCCCCCcEEEecCCCccc
Q 003909 81 E-TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGC--FSILPAAELVPGDIVEVNVGCKIP 157 (787)
Q Consensus 81 ~-~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~--~~~i~~~~Lv~GDII~l~~G~~vP 157 (787)
. ..+..|+++++++++++++..++.++++|+++++++|+++.+++++|+|||+ .++|++++|+|||||.|++||+||
T Consensus 82 ~~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IP 161 (995)
T 3ar4_A 82 GEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVP 161 (995)
T ss_dssp SSGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCC
T ss_pred cccchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCccc
Confidence 1 1234788889999999999999999999999999999999999999999887 699999999999999999999999
Q ss_pred cceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhc
Q 003909 158 ADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSML 237 (787)
Q Consensus 158 aD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~ 237 (787)
|||+|++++++.|+||||+|||||.|+.|.+++..++.....+++|++|+||.+.+|++.++|++||.+|.+|++.+++.
T Consensus 162 aD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~ 241 (995)
T 3ar4_A 162 ADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMA 241 (995)
T ss_dssp SEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHH
T ss_pred ccEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhh
Confidence 99999887789999999999999999999987554444455677899999999999999999999999999999999999
Q ss_pred cCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC-cchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 003909 238 QTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHG-GFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLA 316 (787)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~ 316 (787)
.++.+++|+++.+++++.++.++++++++++|+++...+.++... .|+..+...|..++++++++|||+||++++++++
T Consensus 242 ~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la 321 (995)
T 3ar4_A 242 ATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLA 321 (995)
T ss_dssp TCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCHHHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHH
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHH
Confidence 999999999999999999999998888888877654333222211 2445555667788999999999999999999999
Q ss_pred HHHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCc-ceeEEeecCccccCCCccccCCC
Q 003909 317 LGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGP-IIAEYGVTGTTYAPEGVVFDSSG 395 (787)
Q Consensus 317 ~~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 395 (787)
.+..+|+++|+++|+.+++|.||++|+||||||||||+|+|+|.+++..+..+... .......++..++|.........
T Consensus 322 ~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 401 (995)
T 3ar4_A 322 LGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDK 401 (995)
T ss_dssp HHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTE
T ss_pred HHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccccccc
Confidence 99999999999999999999999999999999999999999999998764322110 01122334444555433221100
Q ss_pred ccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCc
Q 003909 396 IQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (787)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (787)
. ......+.+..++.++++||++....++..+.....++|+|.|++.++++.|+. ......+. ..+.......
T Consensus 402 -~-~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~~--~~~~~~i~---~~~~~~~~~~ 474 (995)
T 3ar4_A 402 -P-IRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVF--NTEVRNLS---KVERANACNS 474 (995)
T ss_dssp -E-CCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTT--CCCCTTSC---TTTSTTHHHH
T ss_pred -c-ccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCCc--cccccccc---cccccccchh
Confidence 0 001134557788889999998876554444555667999999999999998861 11000000 0000000000
Q ss_pred cccccccEeEeecCCCCCceEEEEEeeC-C-----eeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHH
Q 003909 476 HWEIEFKKVSILEFSRDRKMMSVLCSHK-Q-----MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNS 549 (787)
Q Consensus 476 ~~~~~~~~l~~~~f~~~~~~~sviv~~~-~-----~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (787)
.....|+++..+||+|+||+|||+++.+ + +..+|+||+||.|+++|+++..+ +...+++++.++.+.+.+++
T Consensus 475 ~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~--~~~~~l~~~~~~~~~~~~~~ 552 (995)
T 3ar4_A 475 VIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVG--TTRVPMTGPVKEKILSVIKE 552 (995)
T ss_dssp HHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEET--TEEEECCHHHHHHHHHHHHH
T ss_pred hhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcC--CCcccCCHHHHHHHHHHHHH
Confidence 1234688999999999999999999864 3 47899999999999999987765 45578888889999999999
Q ss_pred h--hccccchhhhhhhccCCccccCCCCC-------CCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHH
Q 003909 550 L--AGKEALRCLALALKQMPINRQTLSYD-------DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKS 620 (787)
Q Consensus 550 ~--~~~~g~~~l~~a~~~~~~~~~~~~~~-------~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~ 620 (787)
+ +. +|+||+++|||+++......... .|+|++|+|+++++|++||+++++|++|+++||+++|+|||+..
T Consensus 553 ~~~a~-~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ 631 (995)
T 3ar4_A 553 WGTGR-DTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKG 631 (995)
T ss_dssp HHHST-TCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred HHhhh-ccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHH
Confidence 9 77 99999999999886433221111 17899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHH
Q 003909 621 TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPA 700 (787)
Q Consensus 621 ~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~m 700 (787)
+|.++|+++|+........+.++.|.+++.+.+++....+.+..+|+|++|++|.++++.+++.|+.|+|+|||.||++|
T Consensus 632 ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~a 711 (995)
T 3ar4_A 632 TAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPA 711 (995)
T ss_dssp HHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHH
T ss_pred HHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHH
Confidence 99999999999765433345678888898888888877788889999999999999999999999999999999999999
Q ss_pred HhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHh
Q 003909 701 LKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 780 (787)
Q Consensus 701 l~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~ 780 (787)
|++||+|||||+|++.++++||+++.++++.++.+++++||+++.|+++++.|.+++|+..++.++++.++++|.|++|+
T Consensus 712 lk~Advgiamg~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~~~pl~~~ 791 (995)
T 3ar4_A 712 LKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPV 791 (995)
T ss_dssp HHHSTEEEEETTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSCHH
T ss_pred HHHCCeEEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhheecC
Q 003909 781 SLISVNI 787 (787)
Q Consensus 781 ~~l~~~l 787 (787)
|++|+||
T Consensus 792 qil~~nl 798 (995)
T 3ar4_A 792 QLLWVNL 798 (995)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999995
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-110 Score=1006.64 Aligned_cols=729 Identities=32% Similarity=0.469 Sum_probs=622.7
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcC--
Q 003909 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING-- 80 (787)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 80 (787)
+||+.+++|+++.|++|+.+|||++||.+|+++||+|+++.++.+++|+.+++||+++++++++++++++++.+.+..
T Consensus 52 ~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~ 131 (1034)
T 3ixz_A 52 NDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASE 131 (1034)
T ss_pred chhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhhcc
Confidence 699999999999999999999999999999999999999998888999999999999999999999888877654321
Q ss_pred --CCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCcccc
Q 003909 81 --ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPA 158 (787)
Q Consensus 81 --~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPa 158 (787)
......|+.+++++++++++..+++++++|++++++.++++.+.+++|+|||++++|++++|||||||.|++||+|||
T Consensus 132 ~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPA 211 (1034)
T 3ixz_A 132 GDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPA 211 (1034)
T ss_pred CCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecC
Confidence 111245777888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhcc
Q 003909 159 DMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (787)
Q Consensus 159 D~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~ 238 (787)
||+|++ ++.+.||||+|||||.|+.|.+++.. ..+.+.+|++|+||.+.+|.+.++|++||.+|.+|++.+++..
T Consensus 212 D~~ll~--~~~l~VdES~LTGES~pv~K~~~~~~---~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~ 286 (1034)
T 3ixz_A 212 DIRILQ--AQGRKVDNSSLTGESEPQTRSPECTH---ESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASG 286 (1034)
T ss_pred CeEEEE--eCCceEEecccCCCCCCeeccCCCcc---ccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcc
Confidence 999997 56689999999999999999876532 2334678999999999999999999999999999999999998
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 003909 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (787)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 318 (787)
.+..++|+++.++++..++..++++++++++++++... ..+...|.+++++++++||++||++++++++.+
T Consensus 287 ~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~ 357 (1034)
T 3ixz_A 287 VENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIG---------YTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLT 357 (1034)
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------chHHHHHHHHHHHHHheeccccHHHHHHHHHHH
Confidence 88999999999999999998888888887777664332 134567788899999999999999999999999
Q ss_pred HHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccc
Q 003909 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (787)
Q Consensus 319 ~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (787)
..+|+++|+++|+.+++|.||++++||||||||||+|+|+|.+++..+..+... +.. .+. ..
T Consensus 358 ~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~--------~~~-~~~---------~~ 419 (1034)
T 3ixz_A 358 AKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSAD--------TTE-DQS---------GQ 419 (1034)
T ss_pred HHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCcccccc--------Ccc-ccc---------cc
Confidence 999999999999999999999999999999999999999999998765432211 000 000 00
Q ss_pred cCCCChhHHHHHHHHhhhcccccccccCCC---CCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCc
Q 003909 399 EFPAQLPCLLHIARCSALCNESVLQYNPDK---GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (787)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (787)
......+....+..++.+||++......+. ......|+|+|.|++.+++..+....
T Consensus 420 ~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~--------------------- 478 (1034)
T 3ixz_A 420 TFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAM--------------------- 478 (1034)
T ss_pred ccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChH---------------------
Confidence 111133456678888999998765322111 12345789999999999987654321
Q ss_pred cccccccEeEeecCCCCCceEEEEEeeC----CeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhh
Q 003909 476 HWEIEFKKVSILEFSRDRKMMSVLCSHK----QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLA 551 (787)
Q Consensus 476 ~~~~~~~~l~~~~f~~~~~~~sviv~~~----~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (787)
.....|..+..+||+|+||+|++++... ++..+|+||+||.|+++|+.+..+ |...+++++.++.+.+..++++
T Consensus 479 ~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~--~~~~~l~~~~~~~~~~~~~~~a 556 (1034)
T 3ixz_A 479 GYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIK--GQELPLDEQWREAFQTAYLSLG 556 (1034)
T ss_pred HHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcC--CceecCCHHHHHHHHHHHHHHH
Confidence 1134677899999999999988776542 568899999999999999988754 6678899999999999999999
Q ss_pred ccccchhhhhhhccCCccccCCCC--------CCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHH
Q 003909 552 GKEALRCLALALKQMPINRQTLSY--------DDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE 623 (787)
Q Consensus 552 ~~~g~~~l~~a~~~~~~~~~~~~~--------~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~ 623 (787)
. +|+||+++|++.++..+..... ..|.|++|+|+++++|++|++++++|++|+++||+|+|+|||++.+|.
T Consensus 557 ~-~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~ 635 (1034)
T 3ixz_A 557 G-LGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAK 635 (1034)
T ss_pred h-cCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHH
Confidence 8 9999999999988754211110 126899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCccc--------------------cccccccchhhccCChHHHHHhhccc--eEEEecChhhHHHHHHHH
Q 003909 624 SICHKIGAFDHLVD--------------------FVGRSYTASEFEELPAMQQTVALQHM--ALFTRVEPSHKRMLVEAL 681 (787)
Q Consensus 624 ~~a~~~gi~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~p~~K~~~v~~l 681 (787)
++|+++|+...... ....++++.++..+..+++...+... .+|+|++|++|.++++.+
T Consensus 636 ~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~l 715 (1034)
T 3ixz_A 636 AIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESC 715 (1034)
T ss_pred HHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHH
Confidence 99999999753211 01234566666666666666555433 599999999999999999
Q ss_pred hhCCCEEEEEcCCccCHHHHhhCCceEecC-CccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 682 QNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760 (787)
Q Consensus 682 ~~~~~~v~~vGDg~ND~~ml~~A~vgia~~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~ 760 (787)
++.|+.|+|+|||.||++||+.||+||||| ||++.+|++||+|+.++++++++.++++||+++.|+++++.|.+++|+.
T Consensus 716 q~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~ 795 (1034)
T 3ixz_A 716 QRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIP 795 (1034)
T ss_pred HHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 761 EVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
.+++++++.++++|.|++|+|+||+||
T Consensus 796 ~~~~~~~~~~~~~~~pl~~~qiL~inl 822 (1034)
T 3ixz_A 796 ELTPYLIYITVSVPLPLGCITILFIEL 822 (1034)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 999999999999999999999999996
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-109 Score=993.27 Aligned_cols=729 Identities=33% Similarity=0.474 Sum_probs=619.7
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhc---
Q 003909 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALIN--- 79 (787)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 79 (787)
+||..+++|+++.|++++.+|||++|+++|+++||+|+++.++.+++|+.+++||+++++++++++++++++.+.+.
T Consensus 47 ~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~ 126 (1028)
T 2zxe_A 47 DDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAAT 126 (1028)
T ss_dssp CCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHS
T ss_pred chhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhccc
Confidence 58999999999999999999999999999999999999999888899999999999999999999999998776543
Q ss_pred CC-CCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCcccc
Q 003909 80 GE-TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPA 158 (787)
Q Consensus 80 ~~-~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPa 158 (787)
.. .....|+.+++++++++++..++.++++|++++++.|+++.+..++|+|||++++|++++|+|||||.|++||+|||
T Consensus 127 ~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPa 206 (1028)
T 2zxe_A 127 EDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPA 206 (1028)
T ss_dssp SCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCS
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeec
Confidence 11 11235777888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhcc
Q 003909 159 DMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (787)
Q Consensus 159 D~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~ 238 (787)
||+|++ +..|.||||+|||||.|+.|.+++..+ .+.++.|++|+||.+.+|++.++|++||.+|.+|++.+++..
T Consensus 207 D~~ll~--g~~~~VdeS~LTGES~pv~K~~~~~~~---~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 281 (1028)
T 2zxe_A 207 DLRIIS--AHGCKVDNSSLTGESEPQTRSPEFSSE---NPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASG 281 (1028)
T ss_dssp EEEEEE--EEEEEEECHHHHSCCSCEECCSSCCCS---STTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHH
T ss_pred eEEEEe--eCcEEEEcCccCCCCcceecccCCCCC---CcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccC
Confidence 999997 336899999999999999999875432 245778999999999999999999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 003909 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (787)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 318 (787)
++.+++|+++.++++..++++++++++++++++++.... .+...+.+++++++++|||+||++++++++.+
T Consensus 282 ~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~ 352 (1028)
T 2zxe_A 282 LEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY---------SWLEAVIFLIGIIVANVPEGLLATVTVCLTLT 352 (1028)
T ss_dssp SCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---------CHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC---------cHHHHHHHHHHHHHHHcCchHHHHHHHHHHHH
Confidence 999999999999999999999988888888776543211 23456777888999999999999999999999
Q ss_pred HHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccc
Q 003909 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (787)
Q Consensus 319 ~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (787)
..+|+++|+++|+++++|.||++++||||||||||+|+|+|.+++..+..+.. .+.. .+.+ .
T Consensus 353 ~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~--------~~~~-~~~~---------~ 414 (1028)
T 2zxe_A 353 AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEA--------DTTE-NQSG---------A 414 (1028)
T ss_dssp HHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEEC--------CCCT-TCCS---------C
T ss_pred HHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeec--------cCCC-Cccc---------c
Confidence 99999999999999999999999999999999999999999999875432110 0000 0000 0
Q ss_pred cCCCChhHHHHHHHHhhhcccccccccCCC---CCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCc
Q 003909 399 EFPAQLPCLLHIARCSALCNESVLQYNPDK---GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (787)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (787)
......+....+..++++||++.+...... ......|+|+|.|+++++++.+... .
T Consensus 415 ~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~---------------------~ 473 (1028)
T 2zxe_A 415 AFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSV---------------------Q 473 (1028)
T ss_dssp CCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCH---------------------H
T ss_pred ccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCH---------------------H
Confidence 011123445677888999998765321110 0123468999999999998763210 0
Q ss_pred cccccccEeEeecCCCCCceEEEEEee----CCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhh
Q 003909 476 HWEIEFKKVSILEFSRDRKMMSVLCSH----KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLA 551 (787)
Q Consensus 476 ~~~~~~~~l~~~~f~~~~~~~sviv~~----~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (787)
.....|.++..+||+|+||+|+++++. ++++.+|+||+||.|+++|+++.. +|...++++..++.+.+..++++
T Consensus 474 ~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~--~g~~~~l~~~~~~~~~~~~~~~a 551 (1028)
T 2zxe_A 474 GMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILL--NGAEEPLKEDMKEAFQNAYLELG 551 (1028)
T ss_dssp HHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECB--TTBCCBCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhc--CCCcccCCHHHHHHHHHHHHHHH
Confidence 112357889999999999999999986 356789999999999999998764 46778899988999999999999
Q ss_pred ccccchhhhhhhccCCccccCC----C----CCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHH
Q 003909 552 GKEALRCLALALKQMPINRQTL----S----YDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE 623 (787)
Q Consensus 552 ~~~g~~~l~~a~~~~~~~~~~~----~----~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~ 623 (787)
. +|+||+++|+|.++..+... . ...|.|++|+|+++++|++||+++++|++|+++||+++|+|||+..+|.
T Consensus 552 ~-~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~ 630 (1028)
T 2zxe_A 552 G-LGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAK 630 (1028)
T ss_dssp H-TTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHH
T ss_pred h-cCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHH
Confidence 8 99999999999886432110 0 1126899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCcccc--------------------ccccccchhhccCChHHHHHhhccc--eEEEecChhhHHHHHHHH
Q 003909 624 SICHKIGAFDHLVDF--------------------VGRSYTASEFEELPAMQQTVALQHM--ALFTRVEPSHKRMLVEAL 681 (787)
Q Consensus 624 ~~a~~~gi~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~p~~K~~~v~~l 681 (787)
.+|+++|+....... ...+++|.++..+.++++...+... .+|+|++|++|..+++.+
T Consensus 631 ~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~l 710 (1028)
T 2zxe_A 631 AIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGC 710 (1028)
T ss_dssp HHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHH
Confidence 999999997532110 1235567777777776666655544 499999999999999999
Q ss_pred hhCCCEEEEEcCCccCHHHHhhCCceEecC-CccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 682 QNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760 (787)
Q Consensus 682 ~~~~~~v~~vGDg~ND~~ml~~A~vgia~~-~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~ 760 (787)
++.|+.|+|+|||.||++||++||+||||| +|++.+|++||+|+.++++++|++++++||+++.|+++++.|.++.|+.
T Consensus 711 q~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~ 790 (1028)
T 2zxe_A 711 QRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP 790 (1028)
T ss_dssp HHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHH
T ss_pred HhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 7999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 761 EVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
.+++++++.++++|.|++|+|++|+||
T Consensus 791 ~~~~~~~~~~~~~~~~l~~~qil~inl 817 (1028)
T 2zxe_A 791 EITPFLVFIIGNVPLPLGTVTILCIDL 817 (1028)
T ss_dssp HHHHHHHHHHHCCCCSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHcccchhHHHHHHHHHH
Confidence 999999999999999999999999996
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-103 Score=917.52 Aligned_cols=650 Identities=28% Similarity=0.409 Sum_probs=549.1
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCCCcccchhHH
Q 003909 12 VLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPS 91 (787)
Q Consensus 12 ~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (787)
+.+.|++++..|||++|+.+|+++||+|+++.++ .++|+.|+.+|++++++++++++++++++ ..|.+++
T Consensus 76 ~~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~~-~~~~~~~l~~f~~~~~~ll~~aai~s~~~---------g~~~~~~ 145 (920)
T 1mhs_A 76 PEDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEEK-ENHFLKFLGFFVGPIQFVMEGAAVLAAGL---------EDWVDFG 145 (920)
T ss_dssp SSTTTTTCCCCCCCSHHHHHHHHHTSSSSCCCCC-CSSHHHHTHHHHHHHHHHHHHHHHHCTTC---------SCSSHHH
T ss_pred HHHHhCCCcCCCCCHHHHHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HhHHHHH
Confidence 3456899989999999999999999999999765 56888999999999998888777766543 4567777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceE
Q 003909 92 VILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLR 171 (787)
Q Consensus 92 ~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~ 171 (787)
+++++++++..++.++++|++++++.|+++.+.+++|+|||++++|++++|+|||+|.|++||+|||||+|+++. +.+.
T Consensus 146 ~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~-~~l~ 224 (920)
T 1mhs_A 146 VICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDD-AFLQ 224 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEES-SCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecC-ceee
Confidence 888888899999999999999999999998888999999999999999999999999999999999999999731 2379
Q ss_pred EecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCchHHHHH
Q 003909 172 VDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLD 251 (787)
Q Consensus 172 vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~~~~~~~ 251 (787)
||||+|||||.|+.|.+ +|.+|+||.+.+|.+.++|++||.+|.+|++.+.+..++.+++++++.++
T Consensus 225 VDES~LTGES~PV~K~~-------------gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~ 291 (920)
T 1mhs_A 225 VDQSALTGESLAVDKHK-------------GDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLN 291 (920)
T ss_dssp EBCTTTSSCCCCEECCS-------------SCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHH
T ss_pred eeccccCCCCcceEecC-------------CCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHH
Confidence 99999999999999987 56799999999999999999999999999999988888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhccccccc
Q 003909 252 EFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRS 331 (787)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~ 331 (787)
++..+++++++++++++|+.++... ..+...|.+++++++++|||+||++++++++.+..+|+|+|+++|+
T Consensus 292 ~i~~~l~~~~~~~~~i~~~~~~~~~---------~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~ 362 (920)
T 1mhs_A 292 GIGTILLILVIFTLLIVWVSSFYRS---------NPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQK 362 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTTT---------CCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC---------CcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEec
Confidence 9999888877777766655432111 1244567788999999999999999999999999999999999999
Q ss_pred cccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChhHHHHHH
Q 003909 332 LPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIA 411 (787)
Q Consensus 332 ~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (787)
.+++|.||++|+||||||||||+|+|+|.+++..+... .. .+.
T Consensus 363 ~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~~---------------------------------~~----~ll 405 (920)
T 1mhs_A 363 LSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVD---------------------------------PE----DLM 405 (920)
T ss_dssp TTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCCC---------------------------------CT----HHH
T ss_pred CchhhhhccCcEEEECCCCCccccceeEEEEeecCCCC---------------------------------HH----HHH
Confidence 99999999999999999999999999998865431100 01 133
Q ss_pred HHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCC
Q 003909 412 RCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSR 491 (787)
Q Consensus 412 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~ 491 (787)
.+..+|++... . .+||+|.|+++++++.+... .....|+.+..+||++
T Consensus 406 ~~a~l~~~~~~-----~-----~~~P~e~Al~~~~~~~~~~~----------------------~~~~~~~~~~~~pF~s 453 (920)
T 1mhs_A 406 LTACLAASRKK-----K-----GIDAIDKAFLKSLKYYPRAK----------------------SVLSKYKVLQFHPFDP 453 (920)
T ss_dssp HHHHHSCCCSS-----C-----SCCSHHHHHHHHHHHSSSCC----------------------GGGSCCCEEEEEEEET
T ss_pred HHHHHhcCCcc-----c-----CCChHHHHHHHHHHhcccch----------------------hhccccceeEEeeccC
Confidence 44556764310 0 14999999999887654211 0123567889999999
Q ss_pred CCceEEEEEee-CCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccc
Q 003909 492 DRKMMSVLCSH-KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINR 570 (787)
Q Consensus 492 ~~~~~sviv~~-~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~ 570 (787)
.+|+|+++++. +++.++++||+||.++++|+. ..++++..++.+.+.+++++. +|+|++++|++..
T Consensus 454 ~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~--------~~~~~~~~~~~~~~~~~~~a~-~G~RvL~vA~~~~---- 520 (920)
T 1mhs_A 454 VSKKVVAVVESPQGERITCVKGAPLFVLKTVEE--------DHPIPEEVDQAYKNKVAEFAT-RGFRSLGVARKRG---- 520 (920)
T ss_dssp TTTEEEEEECCSSSSCEEEEEECHHHHHHHCCC--------SSCCCHHHHHHHHHHHHHHHT-SSCCCCEECCCSS----
T ss_pred CCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccc--------cCCCCHHHHHHHHHHHHHHHh-CCCEEEEEEEecc----
Confidence 99999999975 566788999999999999963 135667777888888999998 9999999998732
Q ss_pred cCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhcc
Q 003909 571 QTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEE 650 (787)
Q Consensus 571 ~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~ 650 (787)
|.+++|+|+++++|++||+++++|++|+++||+++|+|||+..+|.++|+++||.....+....+++|. +.
T Consensus 521 -------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~--~~ 591 (920)
T 1mhs_A 521 -------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG--GD 591 (920)
T ss_dssp -------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--CC
T ss_pred -------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc--cc
Confidence 468899999999999999999999999999999999999999999999999999753322222333333 33
Q ss_pred CChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCc
Q 003909 651 LPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNF 730 (787)
Q Consensus 651 ~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~ 730 (787)
+.++++.+.+.+..+|+|++|++|.++|+.+|+.|+.|+|+|||.||+|||++||+||||++|++.+|++||+|+.++++
T Consensus 592 ~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~aADiVl~~~~~ 671 (920)
T 1mhs_A 592 MPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGL 671 (920)
T ss_dssp GGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETTSCHHHHHSSSEEESSCCS
T ss_pred CCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCcccccccHHHHHhcCeEEcCCCH
Confidence 44445555566778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCCchhHhhhheecC
Q 003909 731 ATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCI-FVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 731 ~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~-~~~~~~~~~~~l~~~~~l~~~l 787 (787)
.++.+++++||++++|+++++.|.++.|+...++. ++..++++| +++.|++|+||
T Consensus 672 ~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~--l~~~~il~~~l 727 (920)
T 1mhs_A 672 GAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNRS--LNIELVVFIAI 727 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCC--CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCHHHHHHHHH
Confidence 99999999999999999999999999998764333 334445554 89999999885
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-104 Score=924.08 Aligned_cols=666 Identities=29% Similarity=0.409 Sum_probs=547.6
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcCCC
Q 003909 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGET 82 (787)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (787)
++|+.+++|+++.|+++ .+|||++|+++|+++||+|+++.++ .++|+.|+++|+++++++++++++++++++... .
T Consensus 13 ~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~--~ 88 (885)
T 3b8c_A 13 DLEKIPIEEVFQQLKCS-REGLTTQEGEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGD--G 88 (885)
T ss_dssp CCSSSSTTCCTTTSSSC-SSCSTHHHHHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCT--T
T ss_pred hhHhCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--c
Confidence 58999999999999998 7899999999999999999998876 567788889999999988888888877654321 1
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceee
Q 003909 83 GLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRM 162 (787)
Q Consensus 83 ~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~i 162 (787)
....|.+++.++++++++.+++.++++|++++++.|++..+.+++|+|||++++|++++|+|||+|.|++||+|||||+|
T Consensus 89 ~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~l 168 (885)
T 3b8c_A 89 RPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARL 168 (885)
T ss_dssp SCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCC
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEE
Confidence 22467788888888899999999999999999999999888899999999999999999999999999999999999999
Q ss_pred eeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCC
Q 003909 163 IEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDE 242 (787)
Q Consensus 163 l~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~ 242 (787)
++ +..+.||||+|||||.|+.|.+ +|.+|+||.+.+|++.++|++||.+|.+|++.+.+.. ..+
T Consensus 169 l~--g~~l~VdES~LTGES~Pv~K~~-------------g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~ 232 (885)
T 3b8c_A 169 LE--GDPLKVDQSALTGESLPVTKHP-------------GQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQ 232 (885)
T ss_dssp CC--SSCBCCCCCSTTCCSSCCCBSS-------------CCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSC
T ss_pred EE--cCcccccccccCCCCcceEecC-------------CCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccc
Confidence 96 3457899999999999999987 4679999999999999999999999999999887765 567
Q ss_pred CCchHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Q 003909 243 VTPLKKKLDEFGTFLAKVI-AGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKR 321 (787)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~ 321 (787)
++++++.+++++.+++..+ ++++++.++.+.... ..+ ...+.+++++++++|||+||++++++++.+..+
T Consensus 233 ~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r 303 (885)
T 3b8c_A 233 VGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQR-----RKY----RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 303 (885)
T ss_dssp CSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTTTC-----SCS----TTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----CcH----HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 8999999999987754432 223332222221110 111 234667899999999999999999999999999
Q ss_pred hhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCC
Q 003909 322 MARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFP 401 (787)
Q Consensus 322 l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (787)
|+|+|+++|+.+++|.||++|+||||||||||+|+|+|.+.... .. +. +
T Consensus 304 ~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~-----------~~------------~------ 352 (885)
T 3b8c_A 304 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VF-----------CK------------G------ 352 (885)
T ss_dssp HTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SS-----------CS------------S------
T ss_pred HHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--cc-----------CC------------C------
Confidence 99999999999999999999999999999999999998632110 00 00 0
Q ss_pred CChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccc
Q 003909 402 AQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEF 481 (787)
Q Consensus 402 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (787)
.. ...+.....+|+... .+||++.|+++++.+. . .....+
T Consensus 353 -~~--~~~ll~~aa~~~~~~------------~~~p~~~Al~~~~~~~-----------------~--------~~~~~~ 392 (885)
T 3b8c_A 353 -VE--KDQVLLFAAMASRVE------------NQDAIDAAMVGMLADP-----------------K--------EARAGI 392 (885)
T ss_dssp -TT--HHHHHHHHHHHCCSS------------SCCSHHHHHHHTTCCT-----------------T--------CCCCSS
T ss_pred -CC--HHHHHHHHHHHhCCC------------CCCchHHHHHHHhhch-----------------h--------hHhhcC
Confidence 00 123344556666421 2689999998765310 0 012245
Q ss_pred cEeEeecCCCCCceEEEEEee-CCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhh
Q 003909 482 KKVSILEFSRDRKMMSVLCSH-KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLA 560 (787)
Q Consensus 482 ~~l~~~~f~~~~~~~sviv~~-~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~ 560 (787)
+.+..+||++.+|+|+++++. +++.++++||+||.++++|+.- +..++.+.+.+++++. +|+|+++
T Consensus 393 ~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~------------~~~~~~~~~~~~~~a~-~G~rvl~ 459 (885)
T 3b8c_A 393 REVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKAS------------NDLSKKVLSIIDKYAE-RGLRSLA 459 (885)
T ss_dssp CCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCC------------STTTTTHHHHHHHHTT-TTCEEEE
T ss_pred ceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCc------------hhhHHHHHHHHHHHHh-CCCeEEE
Confidence 677889999999999998875 5677889999999999999631 1112335667788887 9999999
Q ss_pred hhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccc
Q 003909 561 LALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640 (787)
Q Consensus 561 ~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~ 640 (787)
+|++.++..+. ...|++++|+|+++++|++||+++++|++|+++||+++|+|||+..+|.++|+++|+..... ..
T Consensus 460 vA~~~~~~~~~---~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~--~~ 534 (885)
T 3b8c_A 460 VARQVVPEKTK---ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY--PS 534 (885)
T ss_dssp ECCBCCCSSSS---SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS--TT
T ss_pred EEEeccccccc---cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccC--Cc
Confidence 99998764321 12367899999999999999999999999999999999999999999999999999965321 23
Q ss_pred ccccchhhcc-CChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHh
Q 003909 641 RSYTASEFEE-LPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKS 719 (787)
Q Consensus 641 ~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~ 719 (787)
..+.|.+.+. +...++.+.+.+..+|+|++|++|.++++.+|+.|+.|+|+|||.||+|||++||+||||++|++.+++
T Consensus 535 ~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~ak~ 614 (885)
T 3b8c_A 535 SALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARG 614 (885)
T ss_dssp SSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHHHGG
T ss_pred ceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCCccHHHHH
Confidence 3455655554 445555666777789999999999999999999999999999999999999999999999999999999
Q ss_pred hcCeeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 720 ASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 720 ~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
+||+|+.++++.+|.+++++||++++|+++++.|.+++|+..++.++. ..+++|.|++|+|++|+|+
T Consensus 615 aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~-~~~~~~~~l~p~~il~i~l 681 (885)
T 3b8c_A 615 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFML-IALIWEFDFSAFMVLIIAI 681 (885)
T ss_dssp GCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHH-HHSSCSSCSCHHHHHHHHH
T ss_pred hcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHccCcCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999865444433 3457889999999999985
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-80 Score=713.89 Aligned_cols=506 Identities=24% Similarity=0.334 Sum_probs=433.4
Q ss_pred ccchhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEe-CCeEEEeecCCCCCCcEEEecCCCccccceee
Q 003909 85 TAFLEPS-VILLILAANAAVGVITETNAEKALEELRAYQADIATVLR-NGCFSILPAAELVPGDIVEVNVGCKIPADMRM 162 (787)
Q Consensus 85 ~~~~~~~-~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r-~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~i 162 (787)
..|++++ +++++++++.+++.+.+.|+++.+++|.++.+++++++| ||++++|++++|+|||+|.|++||+|||||+|
T Consensus 185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~v 264 (736)
T 3rfu_A 185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEV 264 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEE
Confidence 4567655 556888889999999999999999999999999999888 99999999999999999999999999999999
Q ss_pred eeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCC
Q 003909 163 IEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDE 242 (787)
Q Consensus 163 l~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~ 242 (787)
++ |.+.||||+|||||.|+.|.+ ++.+|+||.+.+|.+.++|++||.+|.++++.+++.+++.+
T Consensus 265 l~---G~~~VDES~LTGES~Pv~K~~-------------gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~ 328 (736)
T 3rfu_A 265 QE---GRSFVDESMVTGEPIPVAKEA-------------SAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRS 328 (736)
T ss_dssp CS---SCEEEECSSSTTCSSCEEECT-------------TCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSS
T ss_pred EE---CceEeeecccCCccccEEecc-------------CCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhc
Confidence 95 778999999999999999987 45699999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHh
Q 003909 243 VTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRM 322 (787)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l 322 (787)
++|+++..++++.++++++++++++.+++|+...... .+...+..++++++++|||+|++++|+++..+..++
T Consensus 329 k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~-------~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~ 401 (736)
T 3rfu_A 329 RAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQP-------ALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG 401 (736)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS-------STTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-------hHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988886654321 122457789999999999999999999999999999
Q ss_pred hhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCC
Q 003909 323 ARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPA 402 (787)
Q Consensus 323 ~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (787)
+++|+++|+.+++|.||++|+||||||||||+|+|+|.++... ..
T Consensus 402 a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~-~~---------------------------------- 446 (736)
T 3rfu_A 402 AQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTD-DF---------------------------------- 446 (736)
T ss_dssp HHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEES-SS----------------------------------
T ss_pred hhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEec-CC----------------------------------
Confidence 9999999999999999999999999999999999999998721 10
Q ss_pred ChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCcccccccc
Q 003909 403 QLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFK 482 (787)
Q Consensus 403 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (787)
....+..++. +++. ...||.+.|+++++++.|+....
T Consensus 447 ~~~~~l~~aa--~le~--------------~s~hPla~Aiv~~a~~~~~~~~~--------------------------- 483 (736)
T 3rfu_A 447 VEDNALALAA--ALEH--------------QSEHPLANAIVHAAKEKGLSLGS--------------------------- 483 (736)
T ss_dssp CHHHHHHHHH--HHHH--------------SSCCHHHHHHHHHHHTTCCCCCC---------------------------
T ss_pred CHHHHHHHHH--HHhh--------------cCCChHHHHHHHHHHhcCCCccC---------------------------
Confidence 1122222222 2221 23589999999999877754321
Q ss_pred EeEeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhh
Q 003909 483 KVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALA 562 (787)
Q Consensus 483 ~l~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a 562 (787)
..+|++..++. +....+++ .+.+|+++.+.+.+.. . ..+.+..++++. +|+|++.+|
T Consensus 484 ---~~~f~~~~g~g-v~~~~~g~--~~~~G~~~~~~~~~~~------------~----~~~~~~~~~~~~-~G~~vl~va 540 (736)
T 3rfu_A 484 ---VEAFEAPTGKG-VVGQVDGH--HVAIGNARLMQEHGGD------------N----APLFEKADELRG-KGASVMFMA 540 (736)
T ss_dssp ---CSCCCCCTTTE-EEECSSSS--CEEEESHHHHHHHCCC------------C----HHHHHHHHHHHH-TTCEEEEEE
T ss_pred ---cccccccCCce-EEEEECCE--EEEEcCHHHHHHcCCC------------h----hHHHHHHHHHHh-cCCeEEEEE
Confidence 12344433321 22222332 2467999987664311 1 124455667776 999999998
Q ss_pred hccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccc
Q 003909 563 LKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRS 642 (787)
Q Consensus 563 ~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~ 642 (787)
+ |.+++|+++++|++|++++++|++|+++|++++|+|||+..++..+++++|++.
T Consensus 541 ~----------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~--------- 595 (736)
T 3rfu_A 541 V----------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK--------- 595 (736)
T ss_dssp E----------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC---------
T ss_pred E----------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE---------
Confidence 4 678999999999999999999999999999999999999999999999999976
Q ss_pred ccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcC
Q 003909 643 YTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD 722 (787)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad 722 (787)
++++++|++|.++++.+++.++.|+|+|||.||++||+.||+|||||++++.++++||
T Consensus 596 ----------------------v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~a~~~AD 653 (736)
T 3rfu_A 596 ----------------------VVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAG 653 (736)
T ss_dssp ----------------------EECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEESSSCSHHHHHCS
T ss_pred ----------------------EEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeCCccHHHHHhCC
Confidence 8899999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 723 MVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGE 761 (787)
Q Consensus 723 ~v~~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~~ 761 (787)
+|+.+++++++++++++||++++|+++|+.|++.||++.
T Consensus 654 ~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~ 692 (736)
T 3rfu_A 654 VTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLG 692 (736)
T ss_dssp EEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999643
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-77 Score=685.11 Aligned_cols=499 Identities=26% Similarity=0.350 Sum_probs=422.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeee
Q 003909 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM 165 (787)
Q Consensus 86 ~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~ 165 (787)
+|..+++++++++++.+++.+.+.|+++.++++.+..+++++|+|||++++|++++|+|||+|.|++||+|||||+|++
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~- 173 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE- 173 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE-
Confidence 4445667777788888888888888888999999999999999999999999999999999999999999999999996
Q ss_pred cCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCc
Q 003909 166 LSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245 (787)
Q Consensus 166 ~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~ 245 (787)
|.+.||||+|||||.|+.|.+ ++.+|+||.+.+|.+.++|++||.+|.++++.+.+.+++.++++
T Consensus 174 --G~~~VdeS~LTGES~Pv~K~~-------------g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~ 238 (645)
T 3j08_A 174 --GESYVDESMISGEPVPVLKSK-------------GDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPP 238 (645)
T ss_dssp --CCEEEECHHHHCCSSCEEECT-------------TCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCS
T ss_pred --CcEEEEcccccCCCCceecCC-------------CCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCCh
Confidence 778999999999999999987 56799999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhc
Q 003909 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARL 325 (787)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~ 325 (787)
+++..++++.++++++++++++.+++|+......+ ...+..++++++++|||+|++++|+++..+..+++++
T Consensus 239 ~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~~~--------~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~ 310 (645)
T 3j08_A 239 IQRLADKVVAYFIPTVLLVAISAFIYWYFIAHAPL--------LFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAEL 310 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSCSC--------CCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcH--------HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999998888877644322111 1234567889999999999999999999999999999
Q ss_pred cccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChh
Q 003909 326 NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLP 405 (787)
Q Consensus 326 ~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (787)
|+++|+++.+|.||++|++|||||||||+|+|+|.++...+. ...
T Consensus 311 gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~-----------------------------------~~~ 355 (645)
T 3j08_A 311 GILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-----------------------------------DER 355 (645)
T ss_dssp CCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSS-----------------------------------CHH
T ss_pred CeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCC-----------------------------------CHH
Confidence 999999999999999999999999999999999999876521 112
Q ss_pred HHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeE
Q 003909 406 CLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVS 485 (787)
Q Consensus 406 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (787)
.+..++. .+.. ...||.+.|+++++++.|....... .+ .
T Consensus 356 ~~l~~aa---~~e~-------------~s~hPla~Aiv~~a~~~g~~~~~~~----------------------~~---~ 394 (645)
T 3j08_A 356 ELLRLAA---IAER-------------RSEHPIAEAIVKKALEHGIELGEPE----------------------KV---E 394 (645)
T ss_dssp HHHHHHH---HHHT-------------TCCSHHHHHHHHHHHHTTCCCCSCC----------------------CC---E
T ss_pred HHHHHHH---HHhh-------------cCCChhHHHHHHHHHhcCCCcCCcc----------------------ce---E
Confidence 2222222 2211 1258999999999998876542110 00 0
Q ss_pred eecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhcc
Q 003909 486 ILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQ 565 (787)
Q Consensus 486 ~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~ 565 (787)
..+ .+. ... ..+.+|+++.+.+... +.. ..+.+..+++.. +|.+++.+++
T Consensus 395 ~~~---g~g-~~~--------~~v~~g~~~~~~~~~~-----------~~~----~~~~~~~~~~~~-~g~~~l~va~-- 444 (645)
T 3j08_A 395 VIA---GEG-VVA--------DGILVGNKRLMEDFGV-----------AVS----NEVELALEKLER-EAKTAVIVAR-- 444 (645)
T ss_dssp EET---TTE-EEE--------TTEEEECHHHHHHTTC-----------CCC----HHHHHHHHHHHT-TTCCCEEEEE--
T ss_pred Eec---CCc-eEE--------EEEEECCHHHHHhcCC-----------Ccc----HHHHHHHHHHHh-cCCeEEEEEE--
Confidence 000 000 000 1246788876654321 112 234455666776 8999999874
Q ss_pred CCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccc
Q 003909 566 MPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTA 645 (787)
Q Consensus 566 ~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~ 645 (787)
|++++|+++++|+++|+++++|++|+++|++++|+|||+..++..+++++|++.
T Consensus 445 --------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~------------ 498 (645)
T 3j08_A 445 --------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------------ 498 (645)
T ss_dssp --------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE------------
T ss_pred --------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE------------
Confidence 679999999999999999999999999999999999999999999999999975
Q ss_pred hhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeec
Q 003909 646 SEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVL 725 (787)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~ 725 (787)
+|++..|++|.++++.+++. +.|+|+|||.||++||+.||+|||||++++.++++||+++
T Consensus 499 -------------------~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl 558 (645)
T 3j08_A 499 -------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVL 558 (645)
T ss_dssp -------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEECCCSCCSSCCSSSEE
T ss_pred -------------------EEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHHHHHhCCEEE
Confidence 88999999999999999988 8999999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 726 ADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760 (787)
Q Consensus 726 ~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~ 760 (787)
.+++++++.+++++||++++++++|+.|++.+|+.
T Consensus 559 ~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~ 593 (645)
T 3j08_A 559 IRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVI 593 (645)
T ss_dssp SSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999965
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-77 Score=694.05 Aligned_cols=499 Identities=26% Similarity=0.351 Sum_probs=423.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeee
Q 003909 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM 165 (787)
Q Consensus 86 ~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~ 165 (787)
+|..+++++++++++.+++.+.+.|+++.++++.++.+++++|+|||++++|++++|+|||+|.|++||+|||||+|++
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~- 251 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE- 251 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE-
Confidence 3444666777788888888888888888999999999999999999999999999999999999999999999999996
Q ss_pred cCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccCCCCCCc
Q 003909 166 LSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245 (787)
Q Consensus 166 ~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~~~~~~~ 245 (787)
|.+.||||+|||||.|+.|.+ ++.+|+||.+.+|.+.++|+++|.+|.++++.+.+.+++.++++
T Consensus 252 --G~~~VdeS~LTGES~pv~K~~-------------g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~ 316 (723)
T 3j09_A 252 --GESYVDESMISGEPVPVLKSK-------------GDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPP 316 (723)
T ss_dssp --CCEEEECHHHHCCSSCEEECT-------------TCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCH
T ss_pred --CCeEEecccccCCCcceeecC-------------CCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCCh
Confidence 778999999999999999987 56799999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhc
Q 003909 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARL 325 (787)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~ 325 (787)
+++.+++++.++++++++++++.+++|+...... +...+..++++++++|||+|++++|+++..+..+++++
T Consensus 317 ~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~~--------~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~ 388 (723)
T 3j09_A 317 IQRLADKVVAYFIPTVLLVAISAFIYWYFIAHAP--------LLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAEL 388 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTCT--------TCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--------HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999888877664332111 11235678899999999999999999999999999999
Q ss_pred cccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChh
Q 003909 326 NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLP 405 (787)
Q Consensus 326 ~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (787)
|+++|+++.+|.||++|++|||||||||+|+|+|.++...+. ...
T Consensus 389 gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~-----------------------------------~~~ 433 (723)
T 3j09_A 389 GILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-----------------------------------DER 433 (723)
T ss_dssp TCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSS-----------------------------------CHH
T ss_pred CeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCC-----------------------------------CHH
Confidence 999999999999999999999999999999999999876521 112
Q ss_pred HHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeE
Q 003909 406 CLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVS 485 (787)
Q Consensus 406 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (787)
.+..++. .+. ....||.+.|++++++..|+...... .+ .
T Consensus 434 ~~l~~aa---~~e-------------~~s~hP~~~Ai~~~a~~~~~~~~~~~----------------------~~---~ 472 (723)
T 3j09_A 434 ELLRLAA---IAE-------------RRSEHPIAEAIVKKALEHGIELGEPE----------------------KV---E 472 (723)
T ss_dssp HHHHHHH---HHH-------------TTCCSHHHHHHHHHHHHTTCCCCSCC----------------------CC---E
T ss_pred HHHHHHH---HHh-------------ccCCCchhHHHHHHHHhcCCCcCCcc----------------------ce---E
Confidence 2223222 121 11258999999999998876542110 00 0
Q ss_pred eecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhcc
Q 003909 486 ILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQ 565 (787)
Q Consensus 486 ~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~ 565 (787)
..+ .+. ... ..+.+|+++.+.+... +.. ..+.+..++++. +|.+++.+++
T Consensus 473 ~~~---g~g-~~~--------~~~~~g~~~~~~~~~~-----------~~~----~~~~~~~~~~~~-~g~~~~~va~-- 522 (723)
T 3j09_A 473 VIA---GEG-VVA--------DGILVGNKRLMEDFGV-----------AVS----NEVELALEKLER-EAKTAVIVAR-- 522 (723)
T ss_dssp EET---TTE-EEE--------TTEEEECHHHHHHTTC-----------CCC----HHHHHHHHHHHT-TTCEEEEEEE--
T ss_pred Eec---CCc-eEE--------EEEEECCHHHHHhcCC-----------Ccc----HHHHHHHHHHHh-cCCeEEEEEE--
Confidence 000 000 000 1246788876654321 111 234555667776 9999999884
Q ss_pred CCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccc
Q 003909 566 MPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTA 645 (787)
Q Consensus 566 ~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~ 645 (787)
|++++|+++++|++||+++++|++|+++|++++|+|||+..++..+++++|++.
T Consensus 523 --------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~------------ 576 (723)
T 3j09_A 523 --------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------------ 576 (723)
T ss_dssp --------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE------------
T ss_pred --------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE------------
Confidence 779999999999999999999999999999999999999999999999999975
Q ss_pred hhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeec
Q 003909 646 SEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVL 725 (787)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~ 725 (787)
++++..|++|.++++.+++. +.|+|+|||.||++||+.||+|||||++++.++++||+++
T Consensus 577 -------------------~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~a~~~AD~vl 636 (723)
T 3j09_A 577 -------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVL 636 (723)
T ss_dssp -------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEECCCCSCCSSCCSSEEC
T ss_pred -------------------EEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEeCCCcHHHHHhCCEEE
Confidence 88999999999999999988 8999999999999999999999999999999999999999
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 726 ADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760 (787)
Q Consensus 726 ~~~~~~~i~~~i~~gR~~~~~i~~~~~~~l~~n~~ 760 (787)
.+++++++++++++||++++++++|+.|++.+|+.
T Consensus 637 ~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~ 671 (723)
T 3j09_A 637 IRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVI 671 (723)
T ss_dssp SSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999965
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-30 Score=266.58 Aligned_cols=141 Identities=25% Similarity=0.502 Sum_probs=131.7
Q ss_pred CCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHH
Q 003909 579 KDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTV 658 (787)
Q Consensus 579 ~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (787)
.+..+.|.+.+.++++|++.++|++|+++|++++++||++...+..+++++|+..
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~------------------------- 177 (263)
T 2yj3_A 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE------------------------- 177 (263)
Confidence 3556899999999999999999999999999999999999999999999999876
Q ss_pred hhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 659 ALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 659 ~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
+|....|+.|..+++.++..++.|+|||||.||++|++.||+||+++++.+..++.||+++.++++..+..+++
T Consensus 178 ------~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v~~~~~l~~l~~~l~ 251 (263)
T 2yj3_A 178 ------YYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIK 251 (263)
Confidence 55667799999999999988899999999999999999999999999988999999999998889999999999
Q ss_pred HHHHHHHHHHHH
Q 003909 739 EGRAIYNNTKQF 750 (787)
Q Consensus 739 ~gR~~~~~i~~~ 750 (787)
.+|++++++++|
T Consensus 252 ~~r~~~~~i~~n 263 (263)
T 2yj3_A 252 NRKRLSNAIPSN 263 (263)
Confidence 999999999986
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-26 Score=198.48 Aligned_cols=110 Identities=31% Similarity=0.434 Sum_probs=102.5
Q ss_pred HHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccceeeeeecCCceEEecccccCCccccccccccccc
Q 003909 114 ALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIA 193 (787)
Q Consensus 114 ~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~ 193 (787)
+++.|.++.+..++|+|+|+++.|++++|+|||+|.|++|++|||||++++ |.+.||||+|||||.|+.|.+
T Consensus 2 al~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~---g~~~vdeS~LTGEs~pv~k~~----- 73 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE---GESYVDESMISGEPVPVLKSK----- 73 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE---CCEEEECHHHHCCSSCEEECT-----
T ss_pred HHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE---ceEEEEccccCCCCccEEECC-----
Confidence 467788889999999999999999999999999999999999999999996 668999999999999999987
Q ss_pred cccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccC
Q 003909 194 TNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT 239 (787)
Q Consensus 194 ~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~ 239 (787)
++.+|+||.+.+|.+.++|+++|.+|.++++.+++.++
T Consensus 74 --------g~~v~aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 74 --------GDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp --------TCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred --------CCEEEeCCEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 46799999999999999999999999999999887653
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.93 E-value=8.7e-25 Score=227.26 Aligned_cols=279 Identities=29% Similarity=0.370 Sum_probs=199.6
Q ss_pred HHHHhhhccccccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCcc
Q 003909 318 GTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQ 397 (787)
Q Consensus 318 ~~~~l~~~~i~~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (787)
++++++++|+++|+++++|.++++++||||||||||.+.+.+.++...+.
T Consensus 9 ~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~------------------------------ 58 (287)
T 3a1c_A 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------------------------------ 58 (287)
T ss_dssp -----CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS------------------------------
T ss_pred hHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC------------------------------
Confidence 57889999999999999999999999999999999999999988765421
Q ss_pred ccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccc
Q 003909 398 LEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHW 477 (787)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (787)
....+..++. ++. ....||.+.|+..+++..|+......
T Consensus 59 -----~~~~~l~~~~--~~e--------------~~s~hp~~~a~~~~~~~~g~~~~~~~-------------------- 97 (287)
T 3a1c_A 59 -----DERELLRLAA--IAE--------------RRSEHPIAEAIVKKALEHGIELGEPE-------------------- 97 (287)
T ss_dssp -----CHHHHHHHHH--HHT--------------TTCCSHHHHHHHHHHHHTTCCCCCCS--------------------
T ss_pred -----CHHHHHHHHH--HHh--------------hcCCCHHHHHHHHHHHhcCCCccccc--------------------
Confidence 0122222222 111 11358999999999988886532110
Q ss_pred cccccEeEeecCCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccch
Q 003909 478 EIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALR 557 (787)
Q Consensus 478 ~~~~~~l~~~~f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 557 (787)
.+ ..+. ... +. . ..+.+|+++.+.+.+ . +..+ .+.+....+.. +|.+
T Consensus 98 --~~---~~~~---G~~-~~----~----~~~~~g~~~~~~~~~---------~--~~~~----~~~~~~~~~~~-~g~~ 144 (287)
T 3a1c_A 98 --KV---EVIA---GEG-VV----A----DGILVGNKRLMEDFG---------V--AVSN----EVELALEKLER-EAKT 144 (287)
T ss_dssp --CE---EEET---TTE-EE----E----TTEEEECHHHHHHTT---------C--CCCH----HHHHHHHHHHH-TTCE
T ss_pred --cc---eeec---CCC-eE----E----EEEEECCHHHHHhcC---------C--CccH----HHHHHHHHHHh-CCCe
Confidence 00 0000 000 00 0 112446655433321 1 1111 12333445554 7888
Q ss_pred hhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc
Q 003909 558 CLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD 637 (787)
Q Consensus 558 ~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~ 637 (787)
++.+++ +..+.+.+...+++.|++.++|+.|+++|++++++||++...+..+++.+|+..
T Consensus 145 ~i~~~~----------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---- 204 (287)
T 3a1c_A 145 AVIVAR----------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---- 204 (287)
T ss_dssp EEEEEE----------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----
T ss_pred EEEEEE----------------CCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce----
Confidence 877764 557899999999999999999999999999999999999999999999999865
Q ss_pred cccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHH
Q 003909 638 FVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVA 717 (787)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~ 717 (787)
+|....|..|...++.++.. +.+++|||+.||++|++.||++|+++++.+..
T Consensus 205 ---------------------------~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~~~ 256 (287)
T 3a1c_A 205 ---------------------------VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVA 256 (287)
T ss_dssp ---------------------------EECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEECCCSCCS
T ss_pred ---------------------------eeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeCCCCHHH
Confidence 45556688999999999888 89999999999999999999999999877777
Q ss_pred HhhcCeeccCCCchHHHHHHHHHHHHHHHHH
Q 003909 718 KSASDMVLADDNFATIVAAVAEGRAIYNNTK 748 (787)
Q Consensus 718 ~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~ 748 (787)
+..||+++.++++..+..+++.+|+++++++
T Consensus 257 ~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 257 VESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp SCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 7889999988899999999999999998875
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-25 Score=196.75 Aligned_cols=116 Identities=28% Similarity=0.370 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEeCCe------EEEeecCCCCCCcEEEecCCCccccceeeeeecCCceEEecccccCCc
Q 003909 108 ETNAEKALEELRAYQADIATVLRNGC------FSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGES 181 (787)
Q Consensus 108 ~~~~~~~~~~l~~~~~~~~~v~r~g~------~~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~vdes~ltGEs 181 (787)
++|+++.++.|.++.+..++|+|+|. ++.|++++|+|||+|.|++|++|||||+|++ |.+.||||+|||||
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~---g~~~vdeS~LTGEs 78 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIE---GHSMVDESLITGEA 78 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECS---CCCEEECTTTTCCS
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEE---ccEEEEeccccCCC
Confidence 45778889999999999999999764 7899999999999999999999999999996 56689999999999
Q ss_pred cccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccC
Q 003909 182 CSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT 239 (787)
Q Consensus 182 ~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~ 239 (787)
.|+.|.+ ++.+|+||.+.+|.+.++|+++|.+|.++++.+++.++
T Consensus 79 ~pv~k~~-------------g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 79 MPVAKKP-------------GSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp SCEECCT-------------TEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred ccEEeCC-------------CCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 9999987 56799999999999999999999999999999987654
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=217.90 Aligned_cols=276 Identities=26% Similarity=0.359 Sum_probs=189.0
Q ss_pred ccccccccccCCeeEEEeCCCCccccCceEEEEEEEecccccCcceeEEeecCccccCCCccccCCCccccCCCChhHHH
Q 003909 329 VRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLL 408 (787)
Q Consensus 329 ~k~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (787)
+|+++++|.+++++.|+||++||||.|++.|.++...+. ....+.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~-----------------------------------~~~~~~ 45 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH-----------------------------------SEDELL 45 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS-----------------------------------CHHHHH
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC-----------------------------------CHHHHH
Confidence 478999999999999999999999999999999876532 112222
Q ss_pred HHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeec
Q 003909 409 HIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILE 488 (787)
Q Consensus 409 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 488 (787)
.++.... . ...++...++.+..+..|...... ..+..++
T Consensus 46 ~~~~~~~--~--------------~s~~~~~~a~~~~~~~~g~~~~~~-------------------------~~~~~~~ 84 (280)
T 3skx_A 46 QIAASLE--A--------------RSEHPIAAAIVEEAEKRGFGLTEV-------------------------EEFRAIP 84 (280)
T ss_dssp HHHHHHH--T--------------TCCSHHHHHHHHHHHHTTCCCCCC-------------------------EEEEEET
T ss_pred HHHHHhh--c--------------cCCCHHHHHHHHHHHhcCCCCCCc-------------------------cceeecC
Confidence 3222211 0 113577788888888877653211 0011110
Q ss_pred CCCCCceEEEEEeeCCeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCc
Q 003909 489 FSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPI 568 (787)
Q Consensus 489 f~~~~~~~sviv~~~~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~ 568 (787)
... ....+ ++. .+..|.++.+....... .. ....+.. .+.+.+.++
T Consensus 85 ---g~~-~~~~~--~~~--~~~~~~~~~~~~~~~~~-----------~~--------~~~~~~~-~~~~~~~~~------ 130 (280)
T 3skx_A 85 ---GKG-VEGIV--NGR--RYMVVSPGYIRELGIKT-----------DE--------SVEKLKQ-QGKTVVFIL------ 130 (280)
T ss_dssp ---TTE-EEEEE--TTE--EEEEECHHHHHHTTCCC-----------CT--------THHHHHT-TTCEEEEEE------
T ss_pred ---CCE-EEEEE--CCE--EEEEecHHHHHHcCCCc-----------hH--------HHHHHHh-CCCeEEEEE------
Confidence 011 11111 111 22346666554433110 00 0111222 444433333
Q ss_pred cccCCCCCCCCCcEEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhh
Q 003909 569 NRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEF 648 (787)
Q Consensus 569 ~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~ 648 (787)
.+..++|.+.+.++++|++.++++.|+++|+++.++||++...+..+++.+|+..
T Consensus 131 ----------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~--------------- 185 (280)
T 3skx_A 131 ----------KNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD--------------- 185 (280)
T ss_dssp ----------ETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------
T ss_pred ----------ECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh---------------
Confidence 3567899999999999999999999999999999999999999999999999875
Q ss_pred ccCChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCC
Q 003909 649 EELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADD 728 (787)
Q Consensus 649 ~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~ 728 (787)
.|....|.+|...++.+.+.. .+++|||+.||++|++.||+||+|+++.+..++.||+++..+
T Consensus 186 ----------------~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~ 248 (280)
T 3skx_A 186 ----------------YFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRN 248 (280)
T ss_dssp ----------------EECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSC
T ss_pred ----------------HhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCC
Confidence 555677889999999888776 568899999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003909 729 NFATIVAAVAEGRAIYNNTKQFIRYMIS 756 (787)
Q Consensus 729 ~~~~i~~~i~~gR~~~~~i~~~~~~~l~ 756 (787)
+++++.++++.+|++++++++++.|++.
T Consensus 249 ~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 249 DPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp CTHHHHHHHHHHHTCCC-----------
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998774
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.71 E-value=5e-18 Score=159.02 Aligned_cols=132 Identities=23% Similarity=0.395 Sum_probs=108.8
Q ss_pred cChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEee-CCeeEEEEeCC
Q 003909 435 GEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSH-KQMCVMFSKGA 513 (787)
Q Consensus 435 ~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~-~~~~~~~~kG~ 513 (787)
++|+|.|++.++...+. ......|.++..+||+|+||+|+++++. +++..+++||+
T Consensus 33 ~n~~d~Ail~~~~~~~~-----------------------~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGA 89 (170)
T 3gwi_A 33 KNLLDTAVLEGTDEESA-----------------------RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGA 89 (170)
T ss_dssp CCHHHHHHHHTSCHHHH-----------------------HHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEEC
T ss_pred CChHHHHHHHHHHhcCh-----------------------hhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCC
Confidence 58999999987533210 0113468899999999999999999986 46788999999
Q ss_pred hHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCC
Q 003909 514 PESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDP 592 (787)
Q Consensus 514 ~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~ 592 (787)
||.|+++|+.+.. +|...|+++..+..+.+.+++|+. +|+||+++|||.++........+.|+||+|+|+++|-|.
T Consensus 90 pE~IL~~C~~~~~--~g~~~~l~~~~~~~i~~~~~~la~-~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 90 LQEILNVCSQVRH--NGEIVPLDDIMLRKIKRVTDTLNR-QGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp HHHHHTTEEEEEE--TTEEEECCHHHHHHHHHHHHHHHH-TTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred cHHHHHHhHHHhc--CCCcccCCHHHHHHHHHHHHHHHh-CCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 9999999998764 578889999999999999999998 999999999999876544344455899999999999764
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.55 E-value=4.3e-15 Score=154.80 Aligned_cols=142 Identities=14% Similarity=0.177 Sum_probs=110.1
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccc--ccccchhhc-cCChHHHHHhhccceEE
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG--RSYTASEFE-ELPAMQQTVALQHMALF 666 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~v~ 666 (787)
..+++|++.++++.|+++|++++|+||+...+++++++++|+......... ..+...... .+.. .....+
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~-------~~i~~~ 211 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKG-------ELIHVF 211 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEEECS-------SCCCTT
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEeccc-------cccchh
Confidence 468999999999999999999999999999999999999998764321100 001110000 0000 011234
Q ss_pred EecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHh---hCCceEecC-------CccHHHHhhcCeeccCCCchHHHHH
Q 003909 667 TRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALK---KADIGIAMG-------SGTAVAKSASDMVLADDNFATIVAA 736 (787)
Q Consensus 667 ~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~---~A~vgia~~-------~~~~~~~~~ad~v~~~~~~~~i~~~ 736 (787)
++..|.+|...+..++..++.|+|+|||.||+||++ .||+||+|| ++.+.+++++|+|+.++++..++.+
T Consensus 212 ~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~ 291 (297)
T 4fe3_A 212 NKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 291 (297)
T ss_dssp CHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred hcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHH
Confidence 556677888888888889999999999999999954 999999999 7888999999999999999999988
Q ss_pred HH
Q 003909 737 VA 738 (787)
Q Consensus 737 i~ 738 (787)
|.
T Consensus 292 il 293 (297)
T 4fe3_A 292 IL 293 (297)
T ss_dssp HH
T ss_pred HH
Confidence 74
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.53 E-value=3.3e-14 Score=141.56 Aligned_cols=150 Identities=15% Similarity=0.070 Sum_probs=111.0
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc---chhh-ccC--------------
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT---ASEF-EEL-------------- 651 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~---~~~~-~~~-------------- 651 (787)
+.++.+++.++|++|+++|++++++|||+...+..+++++|+..+.+..+|..+. +... ...
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999999999999998655544443221 2211 000
Q ss_pred -----------------------ChHHHHHhhc--cceEE-----EecCh--hhHHHHHHHHhhC----CCEEEEEcCCc
Q 003909 652 -----------------------PAMQQTVALQ--HMALF-----TRVEP--SHKRMLVEALQNQ----NEVVAMTGDGV 695 (787)
Q Consensus 652 -----------------------~~~~~~~~~~--~~~v~-----~~~~p--~~K~~~v~~l~~~----~~~v~~vGDg~ 695 (787)
..+....... ...+. .+..| ..|...++.+.+. .+.++++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 0000110000 11111 12334 5788888777653 35789999999
Q ss_pred cCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 696 NDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 696 ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
||++|++.|++||+|+|+.+.+++.||+++.+++.+||++++++
T Consensus 180 nD~~m~~~ag~~va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred HhHHHHHHcCceEEecCchHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999864
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.51 E-value=1.6e-14 Score=139.37 Aligned_cols=126 Identities=13% Similarity=0.245 Sum_probs=104.9
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHH
Q 003909 600 AMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVE 679 (787)
Q Consensus 600 ~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 679 (787)
+|+.|+++|++++++||++...+..+++++|+... |... ..|...++
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~-------------------------------f~~~--~~K~~~~~ 100 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHL-------------------------------FQGR--EDKLVVLD 100 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEE-------------------------------ECSC--SCHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHH-------------------------------hcCc--CChHHHHH
Confidence 99999999999999999999999999999999753 2221 45555555
Q ss_pred HHhh----CCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchH----HHHHHHHHHHHHHHHHHHH
Q 003909 680 ALQN----QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFAT----IVAAVAEGRAIYNNTKQFI 751 (787)
Q Consensus 680 ~l~~----~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~----i~~~i~~gR~~~~~i~~~~ 751 (787)
.+.+ ..+.+++|||+.||++|++.||++++++++.+.+++.||+++.+++.+| +.+.+..+|..+.++++++
T Consensus 101 ~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~ 180 (189)
T 3mn1_A 101 KLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVY 180 (189)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTT
T ss_pred HHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHH
Confidence 5443 3578999999999999999999999999999999999999999876544 5667788899999999999
Q ss_pred HHHHHHH
Q 003909 752 RYMISSN 758 (787)
Q Consensus 752 ~~~l~~n 758 (787)
.|.+.+|
T Consensus 181 ~~~~~~~ 187 (189)
T 3mn1_A 181 LEGHHHH 187 (189)
T ss_dssp STTC---
T ss_pred hcccccc
Confidence 9999887
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.46 E-value=4.2e-13 Score=138.96 Aligned_cols=150 Identities=17% Similarity=0.131 Sum_probs=105.8
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc-------------chh---------
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT-------------ASE--------- 647 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~-------------~~~--------- 647 (787)
...+.+.+.++|++++++|++++++|||+...+..+.+++|+..+.+..+|..+. .+.
T Consensus 36 ~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~ 115 (285)
T 3pgv_A 36 DHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVR 115 (285)
T ss_dssp TSCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHh
Confidence 3468999999999999999999999999999999999999997543332221110 000
Q ss_pred ---------------------------------------hcc-------------CChHHHH---Hhh----c-cceE--
Q 003909 648 ---------------------------------------FEE-------------LPAMQQT---VAL----Q-HMAL-- 665 (787)
Q Consensus 648 ---------------------------------------~~~-------------~~~~~~~---~~~----~-~~~v-- 665 (787)
+.. ...+... ..+ . ...+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 195 (285)
T 3pgv_A 116 NDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSF 195 (285)
T ss_dssp TCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEE
T ss_pred hcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 000 0001100 001 0 0111
Q ss_pred ----EEecCh--hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCe--eccCCCchHH
Q 003909 666 ----FTRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM--VLADDNFATI 733 (787)
Q Consensus 666 ----~~~~~p--~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~--v~~~~~~~~i 733 (787)
+.+..| ..|...++.+.+. .+.+++|||+.||++|++.||+||||+||.+.+|+.||+ ++.+|+.+||
T Consensus 196 s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~vk~~A~~~~v~~sn~edGv 275 (285)
T 3pgv_A 196 STLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAV 275 (285)
T ss_dssp SSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCTTSEECCCGGGTHH
T ss_pred eCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHHHHHhCCCCEecccCCcchH
Confidence 112222 3577777766543 357899999999999999999999999999999999985 7889999999
Q ss_pred HHHHHH
Q 003909 734 VAAVAE 739 (787)
Q Consensus 734 ~~~i~~ 739 (787)
+++|++
T Consensus 276 a~~i~~ 281 (285)
T 3pgv_A 276 PRYLRK 281 (285)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999864
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=4.1e-13 Score=128.57 Aligned_cols=133 Identities=18% Similarity=0.134 Sum_probs=106.1
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChh
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPS 672 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 672 (787)
+.+++.++|++|+++|++++++||++...+..+++++|+... |.. ..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~-------------------------------~~~--~k 82 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF-------------------------------FLG--KL 82 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEE-------------------------------EES--CS
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCcee-------------------------------ecC--CC
Confidence 456788999999999999999999999999999999999752 221 23
Q ss_pred hHHHHHHHHh----hCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHH-HHH---HHHHHHH
Q 003909 673 HKRMLVEALQ----NQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIV-AAV---AEGRAIY 744 (787)
Q Consensus 673 ~K~~~v~~l~----~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~-~~i---~~gR~~~ 744 (787)
.|...++.+. -..+.+++|||+.||++|++.||++++|+++.+.+++.||+++.+++..+++ +++ ...|..+
T Consensus 83 ~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~ 162 (180)
T 1k1e_A 83 EKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKS 162 (180)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCT
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCch
Confidence 4455444333 2347899999999999999999999999999999999999999998888887 443 3455557
Q ss_pred HHHHHHHHHHHHHH
Q 003909 745 NNTKQFIRYMISSN 758 (787)
Q Consensus 745 ~~i~~~~~~~l~~n 758 (787)
.+++.++.|+.+-+
T Consensus 163 ~~~~~~~~~~~~~~ 176 (180)
T 1k1e_A 163 SVFDTAQGFLKSVK 176 (180)
T ss_dssp HHHHCHHHHHHHGG
T ss_pred hhhhhccchhhhhc
Confidence 77777777766543
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.42 E-value=1e-12 Score=136.48 Aligned_cols=150 Identities=19% Similarity=0.262 Sum_probs=106.0
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc---chhh--ccC-------------
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT---ASEF--EEL------------- 651 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~---~~~~--~~~------------- 651 (787)
+..+.+.+.++|++++++|++++++|||+...+..+.+.+|+..+.+..+|..+. +..+ ..+
T Consensus 21 ~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~l~~~~~~~i~~~~~ 100 (290)
T 3dnp_A 21 NGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVLE 100 (290)
T ss_dssp TSCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTSCSEECCCCHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCCEEEecCCCHHHHHHHHHHHH
Confidence 3468999999999999999999999999999999999999987433322221110 0000 000
Q ss_pred -----------------------------------------------------------------ChHHHH---Hh----
Q 003909 652 -----------------------------------------------------------------PAMQQT---VA---- 659 (787)
Q Consensus 652 -----------------------------------------------------------------~~~~~~---~~---- 659 (787)
..+... ..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~ 180 (290)
T 3dnp_A 101 SYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDIQHDITETITKA 180 (290)
T ss_dssp TSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCCCCSEEEEECCGGGHHHHHHHHHHH
T ss_pred HcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhh
Confidence 000000 00
Q ss_pred hccceEEE------ecCh--hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccC
Q 003909 660 LQHMALFT------RVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLAD 727 (787)
Q Consensus 660 ~~~~~v~~------~~~p--~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~ 727 (787)
.....+.. ...| ..|...++.+.+. .+.|++|||+.||++|++.||+||||+|+.+.+|+.||+|+.+
T Consensus 181 ~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~s 260 (290)
T 3dnp_A 181 FPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPEIKRKADWVTRS 260 (290)
T ss_dssp CTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCC
T ss_pred CCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHHHHHhcCEECCC
Confidence 01111111 1122 3577777666543 4578999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHH
Q 003909 728 DNFATIVAAVAE 739 (787)
Q Consensus 728 ~~~~~i~~~i~~ 739 (787)
++.+||+++|++
T Consensus 261 ~~edGv~~~i~~ 272 (290)
T 3dnp_A 261 NDEQGVAYMMKE 272 (290)
T ss_dssp TTTTHHHHHHHH
T ss_pred CCccHHHHHHHH
Confidence 999999999974
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.41 E-value=2.1e-13 Score=144.68 Aligned_cols=153 Identities=12% Similarity=0.127 Sum_probs=112.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccc---ccccccchhhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF---VGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
++.|++.++++.|+++|++++++||+....+..+++++|+....... .+..+++...... ....
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~tg~~~~~~-------------~~~k 244 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEV-------------VSAQ 244 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEEEEEESCC-------------CCHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCeeeeeecccc-------------cChh
Confidence 68999999999999999999999999999999999999996532110 0001111000000 0001
Q ss_pred cChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHHHHHH
Q 003909 669 VEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTK 748 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~ 748 (787)
..|+....+.+.+....+.+++|||+.||++|++.||+|++| ++.+.+++.||+++..++++++..+++.......+++
T Consensus 245 pk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~ 323 (335)
T 3n28_A 245 TKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLS 323 (335)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCC
T ss_pred hhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhc
Confidence 223344455555555567899999999999999999999999 9999999999999999999999999998888888999
Q ss_pred HHHHHHHHHH
Q 003909 749 QFIRYMISSN 758 (787)
Q Consensus 749 ~~~~~~l~~n 758 (787)
+|+.|.+.+|
T Consensus 324 ~~~~~~~~~~ 333 (335)
T 3n28_A 324 WKSKEGHHHH 333 (335)
T ss_dssp CC--------
T ss_pred cccccccccc
Confidence 9999998887
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.41 E-value=1.1e-12 Score=135.55 Aligned_cols=150 Identities=19% Similarity=0.335 Sum_probs=105.3
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCC---CCcccccccccc----ch----------hh----
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF---DHLVDFVGRSYT----AS----------EF---- 648 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~---~~~~~~~~~~~~----~~----------~~---- 648 (787)
...+.+.+.++|++++++|++++++|||+...+..+.+++|+. .+.+..++..+. +. ..
T Consensus 20 ~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~ 99 (279)
T 4dw8_A 20 KKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLY 99 (279)
T ss_dssp TSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHH
T ss_pred CCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHH
Confidence 3468999999999999999999999999999999999999983 332221111100 00 00
Q ss_pred ------------------------------------------ccC---------------ChHHH---HHh----h-ccc
Q 003909 649 ------------------------------------------EEL---------------PAMQQ---TVA----L-QHM 663 (787)
Q Consensus 649 ------------------------------------------~~~---------------~~~~~---~~~----~-~~~ 663 (787)
+.+ ..... ... + ...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~ 179 (279)
T 4dw8_A 100 ECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKI 179 (279)
T ss_dssp HHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHHHHHHHHHHHHhcCCE
Confidence 000 00000 001 1 011
Q ss_pred eE------EEecChh--hHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCch
Q 003909 664 AL------FTRVEPS--HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFA 731 (787)
Q Consensus 664 ~v------~~~~~p~--~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~ 731 (787)
.+ +.+..|. .|...++.+.+. .+.+++|||+.||++|++.||+||||+|+.+.+|+.||+|+.+++.+
T Consensus 180 ~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~ 259 (279)
T 4dw8_A 180 NVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEPVKKAADYITLTNDED 259 (279)
T ss_dssp EEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCGGGT
T ss_pred EEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHHHHHhCCEEcCCCCCc
Confidence 11 1122332 576666665543 45799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 003909 732 TIVAAVAE 739 (787)
Q Consensus 732 ~i~~~i~~ 739 (787)
||+++|++
T Consensus 260 Gv~~~i~~ 267 (279)
T 4dw8_A 260 GVAEAIER 267 (279)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999864
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.41 E-value=4e-13 Score=138.91 Aligned_cols=148 Identities=16% Similarity=0.126 Sum_probs=104.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc------------chh------------
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT------------ASE------------ 647 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~------------~~~------------ 647 (787)
.+.+.++++|++++++|++++++|||+...+..+.+++|...+.+..+|..+. .+.
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 118 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDEL 118 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhc
Confidence 68999999999999999999999999999999999888865433322211000 000
Q ss_pred ---------------------------------------hccCC------------hHHHH-------Hhhc-cceE---
Q 003909 648 ---------------------------------------FEELP------------AMQQT-------VALQ-HMAL--- 665 (787)
Q Consensus 648 ---------------------------------------~~~~~------------~~~~~-------~~~~-~~~v--- 665 (787)
+..+. ..... ..+. ...+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s 198 (283)
T 3dao_A 119 PACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHPDKCEELCTPVFIPAWNKKAHLAAA 198 (283)
T ss_dssp TTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECSSCHHHHHTTTHHHHHTTTEEEEEE
T ss_pred CCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcChHHHHHHHHHHHHHhcCCEEEEEe
Confidence 00000 00000 0010 0111
Q ss_pred ---EEecCh--hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHH
Q 003909 666 ---FTRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAA 736 (787)
Q Consensus 666 ---~~~~~p--~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~ 736 (787)
+.+..| ..|...++.+.+. .+.|++|||+.||++|++.||+||||+|+.+.+|+.||+|+.+++.+||+++
T Consensus 199 ~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~s~~edGv~~~ 278 (283)
T 3dao_A 199 GKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQEVIAAAKHTCAPYWENGVLSV 278 (283)
T ss_dssp TTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHHSSEEECCGGGTHHHHH
T ss_pred cCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHHHHHhcCeECCCCCCChHHHH
Confidence 112222 3577777776543 4578999999999999999999999999999999999999999999999999
Q ss_pred HHH
Q 003909 737 VAE 739 (787)
Q Consensus 737 i~~ 739 (787)
|++
T Consensus 279 l~~ 281 (283)
T 3dao_A 279 LKS 281 (283)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.38 E-value=2.5e-12 Score=131.02 Aligned_cols=148 Identities=20% Similarity=0.214 Sum_probs=101.9
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccc----------------------------
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRS---------------------------- 642 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~---------------------------- 642 (787)
..+.+.+.++|++++++|++++++|||+...+..+.+++|+... +..+|..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~-i~~nGa~i~~~~~~i~~~~~~~~~~~~i~~~~~~~ 97 (258)
T 2pq0_A 19 KQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSF-VSFNGQYVVFEGNVLYKQPLRREKVRALTEEAHKN 97 (258)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCE-EEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEE-EECCCCEEEECCEEEEEecCCHHHHHHHHHHHHhC
Confidence 46889999999999999999999999999999999999987642 2211100
Q ss_pred ------ccchh-hcc--------------------CC----------------h-HHHHH---hhccceE------EEec
Q 003909 643 ------YTASE-FEE--------------------LP----------------A-MQQTV---ALQHMAL------FTRV 669 (787)
Q Consensus 643 ------~~~~~-~~~--------------------~~----------------~-~~~~~---~~~~~~v------~~~~ 669 (787)
.+... ... +. . ..... .+....+ +.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei 177 (258)
T 2pq0_A 98 GHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRAEEEEPYVRNYPEFRFVRWHDVSTDV 177 (258)
T ss_dssp TCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCHHHHHHHHHHCTTEEEEEEETTEEEE
T ss_pred CCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCHHHHHHHHHhCCCeEEEEeCCceEEE
Confidence 00000 000 00 0 00000 0000000 0001
Q ss_pred C--hhhHHHHHHHHhh----CCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 670 E--PSHKRMLVEALQN----QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 670 ~--p~~K~~~v~~l~~----~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
. ...|...++.+.+ ..+.+++|||+.||++|++.||+||||+|+.+.+|+.||+|+.+++.+||++++++
T Consensus 178 ~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 178 LPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp EESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred EECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 1 1246666665544 35679999999999999999999999999999999999999999999999999864
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.37 E-value=7.4e-13 Score=136.72 Aligned_cols=150 Identities=20% Similarity=0.272 Sum_probs=91.7
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCC---Ccccccccccc---ch----------hh-----
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD---HLVDFVGRSYT---AS----------EF----- 648 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~---~~~~~~~~~~~---~~----------~~----- 648 (787)
...+.+.+.++|++++++|++++++|||+...+..+.+.+|+.. +.+..+|.++. +. ..
T Consensus 20 ~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~ 99 (279)
T 3mpo_A 20 KNELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEA 99 (279)
T ss_dssp ----CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHH
Confidence 34689999999999999999999999999999999999999864 22222221110 00 00
Q ss_pred --------------------------------------------ccC-------------ChHHH---HHhhc----c-c
Q 003909 649 --------------------------------------------EEL-------------PAMQQ---TVALQ----H-M 663 (787)
Q Consensus 649 --------------------------------------------~~~-------------~~~~~---~~~~~----~-~ 663 (787)
..+ ..... ...+. . .
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~ 179 (279)
T 3mpo_A 100 WARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRF 179 (279)
T ss_dssp HHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHE
T ss_pred HHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCE
Confidence 000 00000 00000 0 0
Q ss_pred eE------EEecCh--hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCch
Q 003909 664 AL------FTRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFA 731 (787)
Q Consensus 664 ~v------~~~~~p--~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~ 731 (787)
.+ +.+..| ..|...++.+.+. .+.+++|||+.||++|++.||+||||+|+.+.+|+.||+|+.+++.+
T Consensus 180 ~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~ 259 (279)
T 3mpo_A 180 SVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAEN 259 (279)
T ss_dssp EEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------
T ss_pred EEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCcc
Confidence 00 112222 2477777666543 45799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 003909 732 TIVAAVAE 739 (787)
Q Consensus 732 ~i~~~i~~ 739 (787)
||+++|++
T Consensus 260 Gv~~~i~~ 267 (279)
T 3mpo_A 260 GVAAAIRK 267 (279)
T ss_dssp CHHHHHC-
T ss_pred HHHHHHHH
Confidence 99999853
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.36 E-value=9.7e-13 Score=123.28 Aligned_cols=101 Identities=17% Similarity=0.168 Sum_probs=83.4
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHH--HhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHH
Q 003909 599 NAMLSCMTAGIRVIVVTGDNKSTAESICH--KIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRM 676 (787)
Q Consensus 599 ~~i~~l~~~gi~v~i~TGd~~~~a~~~a~--~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 676 (787)
.+|+.|+++|+++.++||+ ..+..+++ .+|+. .. ..+.+|..
T Consensus 43 ~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~~---------------------------------~g~~~K~~ 86 (168)
T 3ewi_A 43 IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-TE---------------------------------VSVSDKLA 86 (168)
T ss_dssp HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-EE---------------------------------CSCSCHHH
T ss_pred HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-EE---------------------------------ECCCChHH
Confidence 3899999999999999999 67888888 66664 21 11345666
Q ss_pred HHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHH
Q 003909 677 LVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVA 735 (787)
Q Consensus 677 ~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~ 735 (787)
.++.+.+. .+.+++|||+.||++|++.||++++|+|+.+.+++.||+|+.+++.+|++.
T Consensus 87 ~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~~k~~Ad~v~~~~~~~G~~~ 149 (168)
T 3ewi_A 87 TVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKCSGGRGAIR 149 (168)
T ss_dssp HHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCCHHHHTTCSEECSSCTTTTHHH
T ss_pred HHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChhHHHHHhCCEEeCCCCCccHHH
Confidence 66655443 568999999999999999999999999999999999999999998888544
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.34 E-value=1.3e-12 Score=134.01 Aligned_cols=68 Identities=28% Similarity=0.397 Sum_probs=60.0
Q ss_pred hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 672 SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 672 ~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
..|...++.+.+. .+.+++|||+.||++|++.||+||||+|+.+.+|++||+|+.+++.+||+++|++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 3577777666543 4578999999999999999999999999999999999999999999999999864
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.33 E-value=5.1e-12 Score=121.88 Aligned_cols=105 Identities=18% Similarity=0.227 Sum_probs=87.4
Q ss_pred HHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHH
Q 003909 598 KNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRML 677 (787)
Q Consensus 598 ~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 677 (787)
..+|+.|+++|++++++||++...+..+++++|+... |... ..|...
T Consensus 58 ~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~-------------------------------~~~~--k~k~~~ 104 (195)
T 3n07_A 58 GYGVKALMNAGIEIAIITGRRSQIVENRMKALGISLI-------------------------------YQGQ--DDKVQA 104 (195)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEE-------------------------------ECSC--SSHHHH
T ss_pred HHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEE-------------------------------eeCC--CCcHHH
Confidence 3479999999999999999999999999999999752 2222 334444
Q ss_pred HHH----HhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHH
Q 003909 678 VEA----LQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVA 735 (787)
Q Consensus 678 v~~----l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~ 735 (787)
++. +.-..+.+++|||+.||++|++.||++++|+|+.+.+++.||+++.+++.+|++.
T Consensus 105 ~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~na~~~~~~~ad~v~~~~~~~G~~~ 166 (195)
T 3n07_A 105 YYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRANYVTHIKGGHGAVR 166 (195)
T ss_dssp HHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCHHHHHHCSEECSSCTTTTHHH
T ss_pred HHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEECChHHHHHHhCCEEEcCCCCCCHHH
Confidence 443 3334578999999999999999999999999999999999999999988888543
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.33 E-value=2.3e-12 Score=132.60 Aligned_cols=67 Identities=24% Similarity=0.268 Sum_probs=59.2
Q ss_pred hHHHHHHHHhh----CCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 673 HKRMLVEALQN----QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 673 ~K~~~v~~l~~----~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
.|...++.+.+ ..+.+++|||+.||++|++.||+||||+|+.+.+|+.||+|+.+++.+||+++|++
T Consensus 200 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 200 HKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp SHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 57766655543 35679999999999999999999999999999999999999999999999999864
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.5e-12 Score=134.48 Aligned_cols=68 Identities=22% Similarity=0.306 Sum_probs=60.3
Q ss_pred hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 672 SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 672 ~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
..|...++.+.+. .+.+++|||+.||++|++.||+||||+|+.+.+|+.||+|+.+++.+||+++|++
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~~k~~Ad~v~~~~~edGv~~~l~~ 298 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKNVKAAANYQAKSNDESGVLDVIDN 298 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHHHHHhccEEcCCCCcchHHHHHHH
Confidence 4677777766543 4579999999999999999999999999999999999999999999999999964
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=8.5e-12 Score=120.33 Aligned_cols=123 Identities=15% Similarity=0.172 Sum_probs=97.9
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHH
Q 003909 600 AMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVE 679 (787)
Q Consensus 600 ~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 679 (787)
+|+.|+++|++++++||++...+..+++++|+....... ...|+....+++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~~-----------------------------kpk~~~~~~~~~ 104 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQ-----------------------------VDKRSAYQHLKK 104 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECSC-----------------------------SSCHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeCC-----------------------------CChHHHHHHHHH
Confidence 699999999999999999999999999999997632110 124555566666
Q ss_pred HHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHH----HHHHHHHHHHHHHHHH
Q 003909 680 ALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVA----AVAEGRAIYNNTKQFI 751 (787)
Q Consensus 680 ~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~----~i~~gR~~~~~i~~~~ 751 (787)
.+.-..+.+++|||+.||++|++.||++++|+++.+.+++.||+++.+++.+|++. .+...|..+..+.+++
T Consensus 105 ~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~ 180 (191)
T 3n1u_A 105 TLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGY 180 (191)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HhCCCHHHEEEECCCHHHHHHHHHCCCEEEeCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHH
Confidence 66666778999999999999999999999999999999999999999998777554 3444555555554443
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.28 E-value=7e-12 Score=122.51 Aligned_cols=106 Identities=19% Similarity=0.244 Sum_probs=88.5
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHH
Q 003909 600 AMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVE 679 (787)
Q Consensus 600 ~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 679 (787)
+|+.|+++|+++.++||++...+..+++++|+... |... ..|...++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~-------------------------------f~~~--k~K~~~l~ 130 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHL-------------------------------YQGQ--SDKLVAYH 130 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEE-------------------------------ECSC--SSHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchh-------------------------------hccc--CChHHHHH
Confidence 99999999999999999999999999999999752 2222 44555555
Q ss_pred HHhh----CCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchH-HHHHHH
Q 003909 680 ALQN----QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFAT-IVAAVA 738 (787)
Q Consensus 680 ~l~~----~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~-i~~~i~ 738 (787)
.+.+ ..+.+++|||+.||++|++.||++++|+++.+.+++.||+++.+++..| +.++++
T Consensus 131 ~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G~v~e~~~ 194 (211)
T 3ij5_A 131 ELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRGAVREVCD 194 (211)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCcHHHHHHH
Confidence 5543 3678999999999999999999999999999999999999999887766 444443
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.2e-11 Score=117.59 Aligned_cols=105 Identities=16% Similarity=0.238 Sum_probs=88.3
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHHH
Q 003909 600 AMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVE 679 (787)
Q Consensus 600 ~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 679 (787)
+|+.|+++|++++++||++...+..+++++|+. .. .. ...|...++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-~~-------------------------------~~--~~~k~~~l~ 92 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-VL-------------------------------HG--IDRKDLALK 92 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-EE-------------------------------ES--CSCHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-eE-------------------------------eC--CCChHHHHH
Confidence 899999999999999999999999999999986 21 11 144555554
Q ss_pred HHhh----CCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 680 ALQN----QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 680 ~l~~----~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
.+.+ ..+.++++||+.||++|++.||++++|+++.+.+++.||+++.+++.+|+...+.
T Consensus 93 ~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~~~~~~ad~v~~~~~~~g~~~~l~ 155 (176)
T 3mmz_A 93 QWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTVPGGDGAIREIA 155 (176)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHH
T ss_pred HHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhHHHHHhCCEEecCCCCCcHHHHHH
Confidence 4443 3567999999999999999999999999999999999999999999888776553
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.25 E-value=3.8e-11 Score=119.94 Aligned_cols=149 Identities=21% Similarity=0.222 Sum_probs=106.3
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc-c-ch-------------------hhc
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-T-AS-------------------EFE 649 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~-~-~~-------------------~~~ 649 (787)
..+.+.+.+++++++++|++++++|||+...+..+.+.+|+..+.+..++..+ . +. ...
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 45889999999999999999999999999999999999998764443333111 1 10 000
Q ss_pred cC--------------------ChHHHHHhhc----cceEE-----EecCh--hhHHHHHHHHhh----CCCEEEEEcCC
Q 003909 650 EL--------------------PAMQQTVALQ----HMALF-----TRVEP--SHKRMLVEALQN----QNEVVAMTGDG 694 (787)
Q Consensus 650 ~~--------------------~~~~~~~~~~----~~~v~-----~~~~p--~~K~~~v~~l~~----~~~~v~~vGDg 694 (787)
.. ..+....... ...+. .+..| ..|...++.+.+ ..+.++++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 00 1111111111 11222 12222 357777666554 24578999999
Q ss_pred ccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 695 VNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 695 ~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
.||++|++.||++++|+|+.+.+++.||+++.+++.+||++++++
T Consensus 179 ~nD~~~~~~ag~~v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp GGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEecCCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 999999999999999999999999999999999999999999864
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.22 E-value=5.6e-11 Score=122.60 Aligned_cols=150 Identities=17% Similarity=0.240 Sum_probs=105.4
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCC---Ccccccccccc----chh---------------
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD---HLVDFVGRSYT----ASE--------------- 647 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~---~~~~~~~~~~~----~~~--------------- 647 (787)
+..+.++++++|++|+++|++++++|||+...+..+.+++++.. +.+..+|..+. +..
T Consensus 20 ~~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~~~i~~~~l~~~~~~~i~ 99 (282)
T 1rkq_A 20 DHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLE 99 (282)
T ss_dssp TSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCCeEEEEecCCHHHHHHHH
Confidence 34689999999999999999999999999999999999999864 22322211100 000
Q ss_pred --------------------------------------------hccCC-------------hHHH---HHhhc-----c
Q 003909 648 --------------------------------------------FEELP-------------AMQQ---TVALQ-----H 662 (787)
Q Consensus 648 --------------------------------------------~~~~~-------------~~~~---~~~~~-----~ 662 (787)
+..+. .+.. ...+. .
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~ 179 (282)
T 1rkq_A 100 KLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEK 179 (282)
T ss_dssp HHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCC
Confidence 00000 0000 00000 1
Q ss_pred ceE------EEecCh--hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCc
Q 003909 663 MAL------FTRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNF 730 (787)
Q Consensus 663 ~~v------~~~~~p--~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~ 730 (787)
..+ +.+..| ..|...++.+.+. .+.++++||+.||++|++.||+||||+|+.+.+++.||+++.+++.
T Consensus 180 ~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~a~~v~~~~~~ 259 (282)
T 1rkq_A 180 YTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLE 259 (282)
T ss_dssp EEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTT
T ss_pred EEEEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHHHHhhCCEEecCCCc
Confidence 111 112223 2677777766543 4578999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHH
Q 003909 731 ATIVAAVAE 739 (787)
Q Consensus 731 ~~i~~~i~~ 739 (787)
+||++++++
T Consensus 260 dGV~~~l~~ 268 (282)
T 1rkq_A 260 DGVAFAIEK 268 (282)
T ss_dssp THHHHHHHH
T ss_pred chHHHHHHH
Confidence 999999864
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.19 E-value=3.2e-11 Score=123.65 Aligned_cols=67 Identities=27% Similarity=0.320 Sum_probs=58.6
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 673 HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 673 ~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
.|...++.+.+. .+.+++|||+.||++|++.||+||+|+|+.+.+++.||+++.+++.+||++++++
T Consensus 191 ~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 191 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQA 261 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccHHHHHhCCeeCcCCCCChHHHHHHH
Confidence 676666665543 3578999999999999999999999999999999999999999999999999863
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=3.7e-11 Score=112.95 Aligned_cols=109 Identities=23% Similarity=0.203 Sum_probs=89.6
Q ss_pred HHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC--hhhHHHH
Q 003909 600 AMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE--PSHKRML 677 (787)
Q Consensus 600 ~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--p~~K~~~ 677 (787)
+++.|+++|++++++||++...+..+++++|+.... .... |+--..+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~-------------------------------~~~kpk~~~~~~~ 87 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLF-------------------------------QGVVDKLSAAEEL 87 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEE-------------------------------CSCSCHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEee-------------------------------cccCChHHHHHHH
Confidence 899999999999999999999999999999997532 2122 2223344
Q ss_pred HHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchH-HHHHHHH
Q 003909 678 VEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFAT-IVAAVAE 739 (787)
Q Consensus 678 v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~-i~~~i~~ 739 (787)
.+.+.-..+.+++|||+.||++|++.||++++++++.+.+++.||+++.+++..+ +.++++.
T Consensus 88 ~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~~~ 150 (164)
T 3e8m_A 88 CNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVEK 150 (164)
T ss_dssp HHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHHHH
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHHHH
Confidence 4444444678999999999999999999999999999999999999999988888 7676643
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.16 E-value=1.1e-10 Score=121.27 Aligned_cols=67 Identities=24% Similarity=0.281 Sum_probs=58.4
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeecc-CCCchHHHHHHHH
Q 003909 673 HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLA-DDNFATIVAAVAE 739 (787)
Q Consensus 673 ~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~-~~~~~~i~~~i~~ 739 (787)
.|...++.+.+. .+.+++|||+.||++|++.||+||||+|+.+.+++.||+++. +++.+||+++|++
T Consensus 224 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 224 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 566666666543 347899999999999999999999999999999999999999 9999999999864
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.14 E-value=2.5e-11 Score=121.76 Aligned_cols=139 Identities=11% Similarity=0.141 Sum_probs=95.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc-c-chh-----------h----------
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-T-ASE-----------F---------- 648 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~-~-~~~-----------~---------- 648 (787)
.+.+.++++|++|+++| +++++|||+...+..+.+.+ .+.+..+|..+ . +.. +
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l---~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 98 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD---INMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRS 98 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS---CEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc---hheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHH
Confidence 68899999999999999 99999999999999887765 22222222111 0 000 0
Q ss_pred ---------------------c---cCChHH---HHHhh---ccceE-----EEecCh--hhHHHHHHHHhhCCCEEEEE
Q 003909 649 ---------------------E---ELPAMQ---QTVAL---QHMAL-----FTRVEP--SHKRMLVEALQNQNEVVAMT 691 (787)
Q Consensus 649 ---------------------~---~~~~~~---~~~~~---~~~~v-----~~~~~p--~~K~~~v~~l~~~~~~v~~v 691 (787)
. ...... ....+ ....+ +.+..| ..|...++.+.+.-. |+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via~ 177 (239)
T 1u02_A 99 WVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-AIIA 177 (239)
T ss_dssp HHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-EEEE
T ss_pred HHhhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEEE
Confidence 0 000000 00001 01111 122333 268888888877644 8999
Q ss_pred cCCccCHHHHhhC--CceEecCCccHHHHhhcCeeccC-CCchHHHHHHHH
Q 003909 692 GDGVNDAPALKKA--DIGIAMGSGTAVAKSASDMVLAD-DNFATIVAAVAE 739 (787)
Q Consensus 692 GDg~ND~~ml~~A--~vgia~~~~~~~~~~~ad~v~~~-~~~~~i~~~i~~ 739 (787)
||+.||++||+.| ++||||+|+ ++.||+++.+ ++.+||+++|++
T Consensus 178 GD~~ND~~Ml~~a~~g~~vam~Na----~~~A~~v~~~~~~~~gV~~~l~~ 224 (239)
T 1u02_A 178 GDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEMRKILKFIEM 224 (239)
T ss_dssp ESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHHHHHHHHHHH
T ss_pred eCCCccHHHHHHhhCCcEEEECCC----CCcceEEeCCCCCHHHHHHHHHH
Confidence 9999999999999 999999998 6789999988 889999999864
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.11 E-value=1.8e-10 Score=118.29 Aligned_cols=149 Identities=13% Similarity=0.116 Sum_probs=78.7
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCC-Ccccccccccc--ch-h-------h-ccCChHHHHH
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD-HLVDFVGRSYT--AS-E-------F-EELPAMQQTV 658 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~-~~~~~~~~~~~--~~-~-------~-~~~~~~~~~~ 658 (787)
+.+.+.++++|++|+++|++++++|||+...+..+.+++|+.. +.+..+|..+. +. + . ..+..+....
T Consensus 25 ~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~ 104 (275)
T 1xvi_A 25 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISL 104 (275)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHH
Confidence 3466789999999999999999999999999999999999875 44444433221 10 0 0 0011000000
Q ss_pred ---h--------------------------------h---cc--ceEEE----------------------------ecC
Q 003909 659 ---A--------------------------------L---QH--MALFT----------------------------RVE 670 (787)
Q Consensus 659 ---~--------------------------------~---~~--~~v~~----------------------------~~~ 670 (787)
. + .. ..+.. +..
T Consensus 105 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~leI~ 184 (275)
T 1xvi_A 105 VLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVL 184 (275)
T ss_dssp HHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHHTTEEEEECSSCEEEE
T ss_pred HHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHHHHHhhCeEEEECCceEEEe
Confidence 0 0 00 00111 111
Q ss_pred h--hhHHHHHHHHhh-----CCCE--EEEEcCCccCHHHHhhCCceEecCCcc---HHHHhh--cC-eeccCCCchHHHH
Q 003909 671 P--SHKRMLVEALQN-----QNEV--VAMTGDGVNDAPALKKADIGIAMGSGT---AVAKSA--SD-MVLADDNFATIVA 735 (787)
Q Consensus 671 p--~~K~~~v~~l~~-----~~~~--v~~vGDg~ND~~ml~~A~vgia~~~~~---~~~~~~--ad-~v~~~~~~~~i~~ 735 (787)
| ..|...++.+.+ ..+. ++++||+.||++|++.|++||||+|+. +.+++. || +++.+++.+||++
T Consensus 185 ~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~ 264 (275)
T 1xvi_A 185 DASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWRE 264 (275)
T ss_dssp ETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC---------------------------
T ss_pred cCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCCchHHHH
Confidence 1 145555544432 2345 899999999999999999999999997 666654 79 9999999999999
Q ss_pred HHHH
Q 003909 736 AVAE 739 (787)
Q Consensus 736 ~i~~ 739 (787)
+|++
T Consensus 265 ~l~~ 268 (275)
T 1xvi_A 265 GLDH 268 (275)
T ss_dssp ----
T ss_pred HHHH
Confidence 8863
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.11 E-value=5e-10 Score=114.47 Aligned_cols=148 Identities=16% Similarity=0.184 Sum_probs=102.9
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCC-Cccccccccc-c--ch-------------------
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD-HLVDFVGRSY-T--AS------------------- 646 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~-~~~~~~~~~~-~--~~------------------- 646 (787)
...+.+.+.++|++ +++|++++++|||+...+..+.+++|+.. +.+..+|..+ . +.
T Consensus 17 ~~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~ 95 (268)
T 1nf2_A 17 NLEISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYI 95 (268)
T ss_dssp TSCCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEEECCBCHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCCCEEEecCCCHHHHHHHHHHH
Confidence 34688999999999 99999999999999999999999999865 3322211100 0 00
Q ss_pred ----------------------------hhccCC-----h-HHH------------------H---Hh----h-ccceEE
Q 003909 647 ----------------------------EFEELP-----A-MQQ------------------T---VA----L-QHMALF 666 (787)
Q Consensus 647 ----------------------------~~~~~~-----~-~~~------------------~---~~----~-~~~~v~ 666 (787)
.+.... . ... . .. + ....+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~ 175 (268)
T 1nf2_A 96 KPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVF 175 (268)
T ss_dssp GGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCHHHHHHHHHHHHHHHTTTSEEE
T ss_pred HhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCCEEEE
Confidence 000000 0 000 0 00 0 011111
Q ss_pred ------EecCh--hhHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHH
Q 003909 667 ------TRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIV 734 (787)
Q Consensus 667 ------~~~~p--~~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~ 734 (787)
.+..| ..|...++.+.+. .+.+++|||+.||++|++.||+|++|+|+.+.+++.||+++.+++.+||+
T Consensus 176 ~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~ 255 (268)
T 1nf2_A 176 KSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVS 255 (268)
T ss_dssp EEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHH
T ss_pred EecCceEEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCHHHHhhCCEEEccCCcchHH
Confidence 12222 2577666666542 45789999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 003909 735 AAVA 738 (787)
Q Consensus 735 ~~i~ 738 (787)
++++
T Consensus 256 ~~i~ 259 (268)
T 1nf2_A 256 YVLE 259 (268)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 9885
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=2.2e-10 Score=116.60 Aligned_cols=65 Identities=20% Similarity=0.292 Sum_probs=56.8
Q ss_pred hhHHHHHHHHhhC----C--CEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 672 SHKRMLVEALQNQ----N--EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 672 ~~K~~~v~~l~~~----~--~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
..|...++.+.+. . +.++++||+.||++|++.||+||||+|+.+ + .+++++.+++.+|+.+++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~--~~~~~~~~~~~~gv~~~~~~ 245 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-P--EGVLATPAPGPEGFRYAVER 245 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-C--TTCEECSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-c--CCcEEeCCCCchHHHHHHHH
Confidence 5788888777654 2 779999999999999999999999999999 5 78999999999999998864
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.10 E-value=2.8e-10 Score=106.65 Aligned_cols=115 Identities=13% Similarity=0.153 Sum_probs=93.6
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe--cC
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR--VE 670 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~ 670 (787)
+.+++.++|++|+++|++++++||++...+..+.+++|+... |.. ..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~-------------------------------~~~~kp~ 85 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEI-------------------------------YTGSYKK 85 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEE-------------------------------EECC--C
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhh-------------------------------ccCCCCC
Confidence 467889999999999999999999999999999999998752 221 12
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHH-HHHH
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIV-AAVA 738 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~-~~i~ 738 (787)
|+.-..+++.+.-..+.++++||+.||++|++.||+++++.++.+..++.||+++.+.+.+|+. ++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~~~~~~~~~a~~v~~~~~~~g~~~~~~~ 154 (162)
T 2p9j_A 86 LEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQRNGGEGALREVAE 154 (162)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECSSCSSSSHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecCccHHHHhhCCEEecCCCCCcHHHHHHH
Confidence 2222334444444566899999999999999999999999988999999999999999988887 4543
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.08 E-value=7.3e-10 Score=114.61 Aligned_cols=67 Identities=28% Similarity=0.347 Sum_probs=57.3
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 673 HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 673 ~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
.|...++.+.+. .+.+++|||+.||++|++.||+||+|+|+.+.+++.||+++.+++.+||+++|++
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 355555555432 3578999999999999999999999999999999999999999999999999864
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=1.7e-10 Score=113.06 Aligned_cols=129 Identities=22% Similarity=0.298 Sum_probs=91.0
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe-c
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR-V 669 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~ 669 (787)
.++.|+++++++.|+++|++++++||+....+..+.+.+|+...... ....... .+ ...+... .
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----------~~-~~~~~~~~~ 139 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN---RLIVKDG-----------KL-TGDVEGEVL 139 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEE---EEEEETT-----------EE-EEEEECSSC
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEe---eeEEECC-----------EE-cCCcccCcc
Confidence 35678999999999999999999999999999889999988542110 0000000 00 0000000 1
Q ss_pred ChhhHHHHHHHHhh----CCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHH
Q 003909 670 EPSHKRMLVEALQN----QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVA 735 (787)
Q Consensus 670 ~p~~K~~~v~~l~~----~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~ 735 (787)
.+..|...+..+.+ ..+.+++|||+.||++|++.||++++|+ +.+.++..||+++.+|++..+..
T Consensus 140 ~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 140 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp STTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-CCHHHHTTCSEEECSSCGGGGGG
T ss_pred CCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-CCHHHHhhcceeecchhHHHHHH
Confidence 13456555544433 3467999999999999999999999997 77888999999998877776654
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.06 E-value=2.2e-10 Score=113.04 Aligned_cols=133 Identities=15% Similarity=0.149 Sum_probs=96.3
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe-c
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR-V 669 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~ 669 (787)
-++.|++.+.++.|+++|++++++|+.....+..+.+.+|+...... .+....- .....+... .
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~----~~~~~~~-----------~~~~~~~~~~~ 138 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSN----TLIVEND-----------ALNGLVTGHMM 138 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEE----EEEEETT-----------EEEEEEEESCC
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccc----eeEEeCC-----------EEEeeeccCCC
Confidence 45889999999999999999999999999999999999998753211 0000000 000000000 1
Q ss_pred ChhhHHHHHHHH----hhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 670 EPSHKRMLVEAL----QNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 670 ~p~~K~~~v~~l----~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
....|...++.+ ....+.+++|||+.||++|++.||++++| |+.+.+++.||+++.++++.++..+++.
T Consensus 139 ~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 139 FSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp STTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred CCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 233455544444 33457799999999999999999999999 8999999999999999999998877743
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.05 E-value=3.7e-10 Score=123.23 Aligned_cols=138 Identities=16% Similarity=0.214 Sum_probs=106.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc---cccccccchhhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD---FVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
++.|++.+.++.|+++|++++++||.....+..+++.+|+.....+ ..+..+++......
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~tg~~~~~v----------------- 318 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPI----------------- 318 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEEEEEECSSC-----------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEEEeeEccCC-----------------
Confidence 6899999999999999999999999999999999999999753211 01111111110000
Q ss_pred cChhhHHHHHHHHhh----CCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHH
Q 003909 669 VEPSHKRMLVEALQN----QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIY 744 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~----~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~ 744 (787)
..+..|..+++.+.+ ..+.+++|||+.||++|++.||+|+++ ++.+.+++.||+++..++++++..++..+|.-+
T Consensus 319 ~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~ 397 (415)
T 3p96_A 319 IDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NAKPALREVADASLSHPYLDTVLFLLGVTRGEI 397 (415)
T ss_dssp CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHH
T ss_pred CCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHH
Confidence 124556665555443 346799999999999999999999999 899999999999999999999999998877765
Q ss_pred HHH
Q 003909 745 NNT 747 (787)
Q Consensus 745 ~~i 747 (787)
...
T Consensus 398 ~~~ 400 (415)
T 3p96_A 398 EAA 400 (415)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=4.2e-10 Score=113.20 Aligned_cols=144 Identities=17% Similarity=0.189 Sum_probs=96.9
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCC--Cccccccccccch---------hh-ccC-----------
Q 003909 595 EEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD--HLVDFVGRSYTAS---------EF-EEL----------- 651 (787)
Q Consensus 595 ~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~--~~~~~~~~~~~~~---------~~-~~~----------- 651 (787)
+.+.+++++++ +|++++++|||+...+..+.+++|+.. +.+..+|..+... .+ ...
T Consensus 22 ~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (244)
T 1s2o_A 22 EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADG 100 (244)
T ss_dssp HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCCCcChHHHHHHhccccHHHHHHHHHh
Confidence 56777888865 689999999999999999999988753 2333333211100 00 000
Q ss_pred ---------------------Ch----H---HHHHhhc----cceE------EEecCh--hhHHHHHHHHhhC----CCE
Q 003909 652 ---------------------PA----M---QQTVALQ----HMAL------FTRVEP--SHKRMLVEALQNQ----NEV 687 (787)
Q Consensus 652 ---------------------~~----~---~~~~~~~----~~~v------~~~~~p--~~K~~~v~~l~~~----~~~ 687 (787)
.. + .....+. ...+ +.+..| ..|...++.+.+. .+.
T Consensus 101 ~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~ 180 (244)
T 1s2o_A 101 FEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQ 180 (244)
T ss_dssp CTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGG
T ss_pred ccCccccCcccCCCeEEEEEeChhhHHHHHHHHHHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHHhCCCHHH
Confidence 00 0 0111111 1111 112222 2577777666543 357
Q ss_pred EEEEcCCccCHHHHhhCCceEecCCccHHHHhh-------cCeeccCCCchHHHHHHHH
Q 003909 688 VAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA-------SDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 688 v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~-------ad~v~~~~~~~~i~~~i~~ 739 (787)
++++||+.||++|++.|++||+|+|+.+.+++. ||+++.+++.+||++++++
T Consensus 181 ~~~~GD~~nD~~m~~~~g~~va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~ 239 (244)
T 1s2o_A 181 TLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp EEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred EEEECCchhhHHHHhccCcEEEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHHH
Confidence 899999999999999999999999999999996 8899999999999999864
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=5.1e-10 Score=107.65 Aligned_cols=107 Identities=22% Similarity=0.311 Sum_probs=86.8
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHH
Q 003909 599 NAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLV 678 (787)
Q Consensus 599 ~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 678 (787)
.+|++|+++|++++++||++...+..+++++|+... |... ..|...+
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~-------------------------------~~~~--kpk~~~~ 106 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL-------------------------------YQGQ--SNKLIAF 106 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE-------------------------------ECSC--SCSHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee-------------------------------ecCC--CCCHHHH
Confidence 489999999999999999999999999999998752 2111 2233333
Q ss_pred ----HHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHH-HHHH
Q 003909 679 ----EALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIV-AAVA 738 (787)
Q Consensus 679 ----~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~-~~i~ 738 (787)
+.+.-..+.+++|||+.||++|++.||++++++++.+.+++.||+++.+.+..+++ ++++
T Consensus 107 ~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 107 SDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 33333346799999999999999999999999988888899999999998888887 6664
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.99 E-value=9.5e-10 Score=116.16 Aligned_cols=147 Identities=14% Similarity=0.151 Sum_probs=98.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccch------------------hhccCCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTAS------------------EFEELPA 653 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~------------------~~~~~~~ 653 (787)
.+.+++.++++.|++ |+.+.++||+....+....+.+++..... +...... .......
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 178 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGELH---GTEVDFDSIAVPEGLREELLSIIDVIASLSGE 178 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSEEE---EEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhhhc---ccccchhhhccccccceeEEecCHHHHhhhhH
Confidence 467899999999999 99999999998777777777777742210 0000000 0000000
Q ss_pred HHHHHhhcc----c--eEEE----ecChhhHHHHHHHHhhCC--CEEEEEcCCccCHHHHhhC----CceEecCCccHHH
Q 003909 654 MQQTVALQH----M--ALFT----RVEPSHKRMLVEALQNQN--EVVAMTGDGVNDAPALKKA----DIGIAMGSGTAVA 717 (787)
Q Consensus 654 ~~~~~~~~~----~--~v~~----~~~p~~K~~~v~~l~~~~--~~v~~vGDg~ND~~ml~~A----~vgia~~~~~~~~ 717 (787)
+.+ ..+.. . ..+. ...+.+|...++.+.... +.|+++||+.||++|++.| |+|||| |+.+.+
T Consensus 179 ~~l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~~l 256 (332)
T 1y8a_A 179 ELF-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNEYA 256 (332)
T ss_dssp HHH-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCHHH
T ss_pred HHH-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCHHH
Confidence 000 00000 0 0010 123557888887665432 4489999999999999999 999999 999999
Q ss_pred HhhcCeeccCCCchHHHHHHH----HHHHHH
Q 003909 718 KSASDMVLADDNFATIVAAVA----EGRAIY 744 (787)
Q Consensus 718 ~~~ad~v~~~~~~~~i~~~i~----~gR~~~ 744 (787)
|+.||+|+.+++.+||+.+++ ++|..+
T Consensus 257 k~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~ 287 (332)
T 1y8a_A 257 LKHADVVIISPTAMSEAKVIELFMERKERAF 287 (332)
T ss_dssp HTTCSEEEECSSTHHHHHHHHHHHHHGGGGG
T ss_pred HhhCcEEecCCCCCHHHHHHHHHHHcCCchh
Confidence 999999999999999988764 455444
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1e-09 Score=111.80 Aligned_cols=67 Identities=31% Similarity=0.368 Sum_probs=57.3
Q ss_pred hHHHHHHHHhh----CCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 673 HKRMLVEALQN----QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 673 ~K~~~v~~l~~----~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
.|...++.+.+ ..+.+++|||+.||++|++.||+|++|+|+.+.+++.||+++.+++.+||.+++++
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~~~~~~a~~v~~~~~~dGv~~~l~~ 257 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 257 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccHHHHhhCCEEeccCchhhHHHHHHH
Confidence 46555555543 34678999999999999999999999999999999999999999999999998863
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.92 E-value=1.2e-09 Score=110.26 Aligned_cols=134 Identities=15% Similarity=0.136 Sum_probs=89.5
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc-c---------------hh-----------
Q 003909 595 EEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT-A---------------SE----------- 647 (787)
Q Consensus 595 ~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~-~---------------~~----------- 647 (787)
+.++++|++|+++|++++++|||+...+..+.+.+|+..+.+..+|..+. . ..
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~ 99 (249)
T 2zos_A 20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKI 99 (249)
T ss_dssp GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCCC------CCCCCCEEECSCCHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCcccccccccccCceEEEecCCCHHHH
Confidence 45999999999999999999999999999999999986544333221110 0 00
Q ss_pred ---------------hccCChHHH-------------------------------HHhhc--cceEE-----EecC-hhh
Q 003909 648 ---------------FEELPAMQQ-------------------------------TVALQ--HMALF-----TRVE-PSH 673 (787)
Q Consensus 648 ---------------~~~~~~~~~-------------------------------~~~~~--~~~v~-----~~~~-p~~ 673 (787)
+........ ...+. ...+. .... ...
T Consensus 100 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~s~~~~ei~~g~s 179 (249)
T 2zos_A 100 REELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTVHGNSD 179 (249)
T ss_dssp HHHHHHHHHHHTCEEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEEECSSSCHHHHHHHTTCEEEECSSSEEEECSCC
T ss_pred HHHHHHHHhhcCEEEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceEecCCHHHHHHHHhCCEEEEecCCeEEEeCCCC
Confidence 000000000 00000 00110 1111 235
Q ss_pred HHHHHHHHhh-----CCCEEEEEcCCccCHHHHhhCCceEecCCcc-HHHHhhcCeeccCC
Q 003909 674 KRMLVEALQN-----QNEVVAMTGDGVNDAPALKKADIGIAMGSGT-AVAKSASDMVLADD 728 (787)
Q Consensus 674 K~~~v~~l~~-----~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~-~~~~~~ad~v~~~~ 728 (787)
|...++.+.+ ..+.|++|||+.||++||+.||+||||+|+. +.+++.||+++.+.
T Consensus 180 Kg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~~ 240 (249)
T 2zos_A 180 KGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVLE 240 (249)
T ss_dssp HHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHHH
T ss_pred hHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEeccc
Confidence 8777766653 3468999999999999999999999999998 77899999988653
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.92 E-value=8.5e-10 Score=115.07 Aligned_cols=129 Identities=15% Similarity=0.202 Sum_probs=96.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccc---ccccccchhhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF---VGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
++.|++.+.++.|+++|++++++||.....+..+++++|+....... .+..+++......
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~tg~i~~~~----------------- 241 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNITLPI----------------- 241 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEEEEEECSSC-----------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCeeeeeEeccc-----------------
Confidence 48899999999999999999999999999999999999997532110 0000111000000
Q ss_pred cChhhHHHHHHHH----hhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 669 VEPSHKRMLVEAL----QNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 669 ~~p~~K~~~v~~l----~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
..+..|..+++.+ ....+.+++|||+.||++|++.||+++++ ++.+.+++.||.++..+++.++..+++
T Consensus 242 ~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 242 MNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp CCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 1234444444433 33456799999999999999999999999 788999999999999889998887664
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=2.4e-09 Score=104.53 Aligned_cols=129 Identities=16% Similarity=0.135 Sum_probs=95.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.|++.+.++.|++.|++++++|+.....+....+.+|+...... ..++..+. .. ....|
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~i~~~~~-~~----------------~kp~~ 130 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAE--ADVLGRDE-AP----------------PKPHP 130 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCG--GGEECTTT-SC----------------CTTSS
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCc--ceEEeCCC-CC----------------CCCCH
Confidence 4568999999999999999999999999999999999998643200 01111110 00 01123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCCccHHHHhhcCeeccCCCchHHHHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGR 741 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR 741 (787)
.--..+.+.+.-..+.+++|||+.||+.|.+.||+ +|+|+++.+..++.||+++.+ +..+...++..|
T Consensus 131 ~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~~~--~~el~~~~~~~~ 199 (205)
T 3m9l_A 131 GGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHARD--CAQLRDLLSAEG 199 (205)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEECSS--HHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEeCC--HHHHHHHHHhcc
Confidence 33345555555556789999999999999999999 999999888888999999964 677777775433
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.83 E-value=2e-09 Score=104.40 Aligned_cols=119 Identities=19% Similarity=0.376 Sum_probs=90.2
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|++.|++++++|+.....+..+ +.+|+... .. ......... .-....|
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~--~~~~~~~~~----------------~~~~~~~ 138 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-AN--RAIFEDGKF----------------QGIRLRF 138 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EE--EEEEETTEE----------------EEEECCS
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-ee--eEEeeCCce----------------ECCcCCc
Confidence 7899999999999999999999999998888888 88887542 11 000000000 0023456
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
..|...++.+ ..+.+++|||+.||++|++.||++|+|+++.+ .||+++.+ ++.+.++++
T Consensus 139 ~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~----~ad~v~~~--~~el~~~l~ 197 (201)
T 4ap9_A 139 RDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVGREIP----GADLLVKD--LKELVDFIK 197 (201)
T ss_dssp SCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT----TCSEEESS--HHHHHHHHH
T ss_pred cCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc----cccEEEcc--HHHHHHHHH
Confidence 7788888888 56678899999999999999999999998877 79999965 555666664
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.82 E-value=8.7e-09 Score=102.94 Aligned_cols=128 Identities=23% Similarity=0.283 Sum_probs=95.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.|++.+.++.|++.|++++++|+.....+..+.+.+|+.... ..++..+....- ...|
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~~----------------kp~~ 163 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL----TVIAGDDSVERG----------------KPHP 163 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC----SEEECTTTSSSC----------------TTSS
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe----eeEEeCCCCCCC----------------CCCH
Confidence 46789999999999999999999999999999999999986532 112222111100 1223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc---eEecCC-ccHHHHh-hcCeeccCCCchHHHHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI---GIAMGS-GTAVAKS-ASDMVLADDNFATIVAAVAEGR 741 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v---gia~~~-~~~~~~~-~ad~v~~~~~~~~i~~~i~~gR 741 (787)
+--..+++.+....+.+++|||+.||+.|++.||+ +|++++ ..+..++ .||+++.+ +..+.++++.++
T Consensus 164 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~--~~el~~~l~~~~ 236 (237)
T 4ex6_A 164 DMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDS--FPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESS--HHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECC--HHHHHHHHHccC
Confidence 44456667776667789999999999999999999 999984 4466665 79999854 778888876543
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.79 E-value=5.7e-09 Score=102.87 Aligned_cols=124 Identities=7% Similarity=-0.016 Sum_probs=91.2
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.|++.+.++.|++.|++++++|+. ..+....+.+|+.... ..++........ ...|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f----~~~~~~~~~~~~----------------Kp~~ 148 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF----DAIADPAEVAAS----------------KPAP 148 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC----SEECCTTTSSSC----------------TTSS
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc----ceEeccccCCCC----------------CCCh
Confidence 35688999999999999999999998 4566777888875432 111121111100 0123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
+--..+.+.+.-..+.+++|||+.||++|++.||++++|.|+.+..+ .||+++.+++..++..+++
T Consensus 149 ~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~-~a~~v~~~~~el~~~~~~~ 214 (221)
T 2wf7_A 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLG-DDIVIVPDTSHYTLEFLKE 214 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHC-SSSEEESSGGGCCHHHHHH
T ss_pred HHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhc-cccchhcCHHhCCHHHHHH
Confidence 33345556665556789999999999999999999999999888887 8999999888888877764
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.78 E-value=3.7e-08 Score=96.07 Aligned_cols=129 Identities=15% Similarity=0.124 Sum_probs=96.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++ ++++++|+.+...+..+.+.+|+...... ....+.... ....-...|
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~---~~~~~~~~~-------------~~~~~~p~p 131 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCH---KLEIDDSDR-------------VVGYQLRQK 131 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEE---EEEECTTSC-------------EEEEECCSS
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecc---eeEEcCCce-------------EEeeecCCC
Confidence 5789999999999999 99999999999999999999998753210 011000000 000001457
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
+.|...++.+...++.+++|||+.||++|.+.||+++++ ++.+..++.++.++.-+++..+..+++
T Consensus 132 ~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 132 DPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp SHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred chHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEE-CCcHHHHHHHhhhccccchHHHHHHHH
Confidence 889999999988888999999999999999999999998 456666666655543456888877764
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.77 E-value=1.7e-08 Score=100.57 Aligned_cols=125 Identities=12% Similarity=0.075 Sum_probs=88.0
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|++.|++++++|+... +..+.+.+|+..... .++..+... .....|
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~----~i~~~~~~~----------------~~Kp~~ 149 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFH----AIVDPTTLA----------------KGKPDP 149 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCS----EECCC-------------------------C
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcC----EEeeHhhCC----------------CCCCCh
Confidence 3678999999999999999999999855 778889999865431 111111110 011223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
+--..+.+.+.-..+.+++|||+.||+.|.+.||++++|.++.+..+ .||+++.+.+..++..++++
T Consensus 150 ~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~-~ad~v~~s~~el~~~~~~~~ 216 (233)
T 3nas_A 150 DIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPML-GADLVVRQTSDLTLELLHEE 216 (233)
T ss_dssp CHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC--------CSEECSSGGGCCHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccc-cCCEEeCChHhCCHHHHHHH
Confidence 33356667776667889999999999999999999999998887777 89999998888888877764
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.72 E-value=3.2e-08 Score=97.16 Aligned_cols=128 Identities=12% Similarity=0.081 Sum_probs=89.4
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEE--ecC
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT--RVE 670 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~ 670 (787)
+.|++.+.++.|+++|++++++|+.....+..+.+.+|+................. ..-+. ...
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~ 148 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGS--------------FKELDNSNGA 148 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB--------------EEEEECTTST
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCc--------------eeccCCCCCC
Confidence 77999999999999999999999999999999999999863110000000000000 00011 133
Q ss_pred hhhHHHHHHHH-hhCCCEEEEEcCCccCHHHHhh----CCceEecCCccHHHHhhcCeeccCCCchHHHHH
Q 003909 671 PSHKRMLVEAL-QNQNEVVAMTGDGVNDAPALKK----ADIGIAMGSGTAVAKSASDMVLADDNFATIVAA 736 (787)
Q Consensus 671 p~~K~~~v~~l-~~~~~~v~~vGDg~ND~~ml~~----A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~ 736 (787)
|..+.+.+... ....+.+++|||+.||++|++. +.++++++++.+..+..||+++.+ +..+..+
T Consensus 149 ~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~--~~el~~~ 217 (219)
T 3kd3_A 149 CDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVARN--VAELASL 217 (219)
T ss_dssp TTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEESS--HHHHHHH
T ss_pred cccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeCC--HHHHHHh
Confidence 45666666554 5567899999999999999976 456666778889999999999865 5455443
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.70 E-value=2.7e-08 Score=98.44 Aligned_cols=127 Identities=15% Similarity=0.184 Sum_probs=91.6
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
..+.|++.+.++.|++.|++++++|+.....+....+.+|+..... .++..+....-. ..
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~k----------------p~ 144 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD----AIVGSSLDGKLS----------------TK 144 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----EEEEECTTSSSC----------------SH
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee----eeeccCCCCCCC----------------CC
Confidence 3578999999999999999999999999999999999999865321 111111110000 11
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc---eEecCCccHHH--HhhcCeeccCCCchHHHHHHHH
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI---GIAMGSGTAVA--KSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v---gia~~~~~~~~--~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
|+--..+.+.+.-..+.+++|||+.||+.|++.||+ +|++|++.... +..||+++.+ +..+..++..
T Consensus 145 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s--~~el~~~~~~ 216 (226)
T 3mc1_A 145 EDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNS--VDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESS--HHHHHHHHHT
T ss_pred HHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECC--HHHHHHHHHH
Confidence 223344555555556789999999999999999999 88888655443 5789999964 6677777653
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.68 E-value=2.1e-08 Score=103.70 Aligned_cols=132 Identities=17% Similarity=0.159 Sum_probs=90.8
Q ss_pred CCChhHHHHHHHHHhC-CCEEEEEcCC---------------------CHHHHHHHHHHhCCCCCccccccccccchhhc
Q 003909 592 PPREEVKNAMLSCMTA-GIRVIVVTGD---------------------NKSTAESICHKIGAFDHLVDFVGRSYTASEFE 649 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~-gi~v~i~TGd---------------------~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~ 649 (787)
...+++.+.++.+++. |+++.+.|.. ....+..+.+..|+......... ...
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~------~~~ 195 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNP------LAG 195 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCG------GGT
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccc------ccc
Confidence 3568899999999988 9998888866 33444555555555322110000 000
Q ss_pred cCChHHHHHhhccceEEEecCh--hhHHHHHHHHhh----CCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCe
Q 003909 650 ELPAMQQTVALQHMALFTRVEP--SHKRMLVEALQN----QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM 723 (787)
Q Consensus 650 ~~~~~~~~~~~~~~~v~~~~~p--~~K~~~v~~l~~----~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~ 723 (787)
. .....+.+..| ..|...++.+.+ ..+.++++||+.||++|++.||+|++|+++.+.+++.||+
T Consensus 196 ~----------~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~~~~~~a~~ 265 (289)
T 3gyg_A 196 D----------PEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQEAKNLHNL 265 (289)
T ss_dssp C----------CTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCHHHHHHCCC
T ss_pred C----------CCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccHHHHHhCCE
Confidence 0 00002222222 356665555543 3467899999999999999999999999999999999999
Q ss_pred eccCCCchHHHHHHHH
Q 003909 724 VLADDNFATIVAAVAE 739 (787)
Q Consensus 724 v~~~~~~~~i~~~i~~ 739 (787)
++.+++.+|+++++++
T Consensus 266 v~~~~~~~gv~~~~~~ 281 (289)
T 3gyg_A 266 ITDSEYSKGITNTLKK 281 (289)
T ss_dssp BCSSCHHHHHHHHHHH
T ss_pred EcCCCCcCHHHHHHHH
Confidence 9999999999999863
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.65 E-value=4.7e-08 Score=96.49 Aligned_cols=118 Identities=15% Similarity=0.099 Sum_probs=86.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.+++.+.++.|++.|++++++|+.....+....+.+|+..... .++....... ....|
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~----------------~kp~~ 153 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD----ALASAEKLPY----------------SKPHP 153 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEECTTSSC----------------CTTST
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCc----EEEeccccCC----------------CCCCh
Confidence 356889999999999999999999999998888999988764321 1111111000 00123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec----CCccHHHHhhcCeeccCCC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM----GSGTAVAKSASDMVLADDN 729 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~----~~~~~~~~~~ad~v~~~~~ 729 (787)
.--..+.+.+.-..+.+++|||+.||++|++.||+++++ +++.+..+..||+++.+.+
T Consensus 154 ~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~ 215 (226)
T 1te2_A 154 QVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLT 215 (226)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGG
T ss_pred HHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHH
Confidence 344556666666667899999999999999999999999 6666677889999997643
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.59 E-value=4.9e-08 Score=96.93 Aligned_cols=126 Identities=12% Similarity=0.053 Sum_probs=92.0
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.+++.+.++.|++.|++++++|+.....+....+.+|+.... ..++.......- ...|
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~~----------------kp~~ 150 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINK----INIVTRDDVSYG----------------KPDP 150 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTS----SCEECGGGSSCC----------------TTST
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhh----heeeccccCCCC----------------CCCh
Confidence 45789999999999999999999999999999999999987643 112222211100 0123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc---eEecC-CccHHHHhh-cCeeccCCCchHHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI---GIAMG-SGTAVAKSA-SDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v---gia~~-~~~~~~~~~-ad~v~~~~~~~~i~~~i~~ 739 (787)
.--..+.+.+.-..+.+++|||+.||+.|++.||+ +|+++ ++.+..++. ||+++.+ +..+..+++.
T Consensus 151 ~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~--~~el~~~l~~ 221 (233)
T 3s6j_A 151 DLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYED--PLDLLNHLDE 221 (233)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESS--HHHHHHTGGG
T ss_pred HHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECC--HHHHHHHHHH
Confidence 33344555555556789999999999999999999 77777 666777765 9999864 7777777754
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.58 E-value=1.5e-07 Score=95.84 Aligned_cols=127 Identities=16% Similarity=0.160 Sum_probs=89.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..... ..++..+....- ...|
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~----------------kp~~ 163 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP---DFLVTPDDVPAG----------------RPYP 163 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC---SCCBCGGGSSCC----------------TTSS
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccCh---HheecCCccCCC----------------CCCH
Confidence 457899999999999999999999999998888888887654311 112222211100 0224
Q ss_pred hhHHHHHHHHhhCC-CEEEEEcCCccCHHHHhhCC---ceEecCCc------------------------cHHHHhh-cC
Q 003909 672 SHKRMLVEALQNQN-EVVAMTGDGVNDAPALKKAD---IGIAMGSG------------------------TAVAKSA-SD 722 (787)
Q Consensus 672 ~~K~~~v~~l~~~~-~~v~~vGDg~ND~~ml~~A~---vgia~~~~------------------------~~~~~~~-ad 722 (787)
..-..+.+.+.... +.+++|||+.||+.|++.|| ++|+++++ .+..++. ||
T Consensus 164 ~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 243 (267)
T 1swv_A 164 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH 243 (267)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCc
Confidence 44456666666656 78999999999999999999 67777765 3445555 99
Q ss_pred eeccCCCchHHHHHHHH
Q 003909 723 MVLADDNFATIVAAVAE 739 (787)
Q Consensus 723 ~v~~~~~~~~i~~~i~~ 739 (787)
+++.+ +..+..++..
T Consensus 244 ~v~~~--~~el~~~l~~ 258 (267)
T 1swv_A 244 FTIET--MQELESVMEH 258 (267)
T ss_dssp EEESS--GGGHHHHHHH
T ss_pred eeccC--HHHHHHHHHH
Confidence 99854 6677777644
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.54 E-value=7.6e-08 Score=94.85 Aligned_cols=123 Identities=12% Similarity=0.124 Sum_probs=84.4
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChh
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPS 672 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 672 (787)
+.+++.+.++.|++.|++++++|+..........+.+|+..... .++..+....- ...|.
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----------------k~~~~ 149 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFD----IIIGGEDVTHH----------------KPDPE 149 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCS----EEECGGGCSSC----------------TTSTH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhee----eeeehhhcCCC----------------CCChH
Confidence 45889999999999999999999999998888888888765321 11111111000 01122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec----CCccHHHHhh-cCeeccCCCchHHHHHH
Q 003909 673 HKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM----GSGTAVAKSA-SDMVLADDNFATIVAAV 737 (787)
Q Consensus 673 ~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~----~~~~~~~~~~-ad~v~~~~~~~~i~~~i 737 (787)
--..+.+.+.-..+.+++|||+.||++|++.||++++| +++.+..++. ||+++.+ .+.+...+
T Consensus 150 ~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~--~~el~~~l 217 (225)
T 3d6j_A 150 GLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIST--LGQLISVP 217 (225)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESS--GGGGC---
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECC--HHHHHHhh
Confidence 23445555555566789999999999999999999887 5556666665 8999865 44455554
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.53 E-value=3.4e-07 Score=90.97 Aligned_cols=112 Identities=18% Similarity=0.140 Sum_probs=78.2
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc---cccccccchhhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD---FVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
.+.|++.+.++.|+++|++++++||.....+..+++.+|+...... ..+..+.+.... ..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~-----------------~~ 154 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRYTGRIEG-----------------TP 154 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEEEEEEES-----------------SC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEEeeeecC-----------------CC
Confidence 4789999999999999999999999999999999999999742211 000001110000 01
Q ss_pred cChhhHHHHHHHHhh-C------CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhc
Q 003909 669 VEPSHKRMLVEALQN-Q------NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSAS 721 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~-~------~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~a 721 (787)
..+..|...++.+.+ . .+.++++||+.||++|++.||+++++. +.+.+++.|
T Consensus 155 ~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~-~~~~l~~~a 213 (232)
T 3fvv_A 155 SFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN-PSPGLREIA 213 (232)
T ss_dssp SSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES-CCHHHHHHH
T ss_pred CcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC-cCHHHHHHH
Confidence 223566665544432 2 368999999999999999999999994 444554444
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.51 E-value=8.3e-08 Score=95.38 Aligned_cols=126 Identities=10% Similarity=0.053 Sum_probs=94.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|++.|++++++|+.....+....+.+|+..... .++.......- ...|
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~----------------kp~~ 158 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFD----HVLSVDAVRLY----------------KTAP 158 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCS----EEEEGGGTTCC----------------TTSH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcC----EEEEecccCCC----------------CcCH
Confidence 467899999999999999999999999999999999999875431 11111111100 0123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec----CCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM----GSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~----~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
.--..+.+.+.-..+.+++|||+.||+.|.+.||++++| +++.+..+..+|+++.+ +..+..+++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~--~~el~~~l~~ 228 (233)
T 3umb_A 159 AAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHD--MRDLLQFVQA 228 (233)
T ss_dssp HHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESS--HHHHHHHHHC
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECC--HHHHHHHHHH
Confidence 334456666666677899999999999999999999999 67777777889999964 7777777754
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.50 E-value=4.4e-07 Score=90.07 Aligned_cols=124 Identities=16% Similarity=0.151 Sum_probs=91.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.|++.+.++.|++. ++++++|+.....+....+.+|+..... .++........ ...|
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~----~~~~~~~~~~~----------------kp~~ 158 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFD----SITTSEEAGFF----------------KPHP 158 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEEHHHHTBC----------------TTSH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcc----eeEeccccCCC----------------CcCH
Confidence 4678999999999999 9999999999999999999999865321 11111111100 1123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCC---ceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKAD---IGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~---vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
.--..+.+.+.-..+.+++|||+. ||+.|.+.|| ++|+++++.+..++.||+++.+ +..+..+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~--~~el~~~l~ 227 (234)
T 3u26_A 159 RIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSD--LREVIKIVD 227 (234)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESS--THHHHHHHH
T ss_pred HHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCC--HHHHHHHHH
Confidence 334456666666677899999997 9999999999 5777888888888899999965 666776664
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.49 E-value=1.9e-07 Score=93.33 Aligned_cols=124 Identities=17% Similarity=0.145 Sum_probs=87.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|++.|++++++|+.....+..+.+.+|+..... .++..+....- ...|
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~----------------kp~~ 169 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFK----YIAGSNLDGTR----------------VNKN 169 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----EEEEECTTSCC----------------CCHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEE----EEEeccccCCC----------------CCCH
Confidence 467899999999999999999999999999999999999865321 11111111000 0112
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCc---eEecCCccHHH--HhhcCeeccCCCchHHHHHH
Q 003909 672 SHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADI---GIAMGSGTAVA--KSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 672 ~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A~v---gia~~~~~~~~--~~~ad~v~~~~~~~~i~~~i 737 (787)
.--..+.+.+... .+.+++|||+.||+.|.+.||+ +|+++++.... +..||+++.+ +..+.+++
T Consensus 170 ~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~--~~el~~~l 239 (240)
T 3sd7_A 170 EVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVEN--VESIKDIL 239 (240)
T ss_dssp HHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESS--STTHHHHH
T ss_pred HHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECC--HHHHHHHh
Confidence 2234455566656 7789999999999999999999 77777555443 4789999975 45555543
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.49 E-value=2.4e-07 Score=91.98 Aligned_cols=124 Identities=12% Similarity=0.170 Sum_probs=86.8
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCC---HHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEec
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDN---KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRV 669 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~---~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 669 (787)
+.+++.+.++.|++.|++++++|+.. ........+.+|+.... ..++...+.... ..
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~~----------------kp 159 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI----DKTFFADEVLSY----------------KP 159 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC----SEEEEHHHHTCC----------------TT
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh----hhheeccccCCC----------------CC
Confidence 47899999999999999999999999 88888888998886532 111222111110 01
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCceEec---CCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 670 EPSHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIGIAM---GSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~vgia~---~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
.|+--..+.+.+.-..+.+++|||+. ||+.|++.||++++| +++.+..+..+|+++.+ +..+..+++
T Consensus 160 ~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l~ 230 (235)
T 2om6_A 160 RKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPS--IANLKDVIE 230 (235)
T ss_dssp CHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESS--GGGHHHHHH
T ss_pred CHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhh--HHHHHHHHH
Confidence 23333344555555567899999999 999999999999998 54444445568888754 666766653
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.4e-07 Score=93.46 Aligned_cols=125 Identities=11% Similarity=0.165 Sum_probs=91.6
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
-++.|++.+.++.|++.|++++++|+.....+....+.+|+..... .++.......- ...
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~----------------kp~ 154 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFD----HLISVDEVRLF----------------KPH 154 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCS----EEEEGGGTTCC----------------TTC
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcc----eeEehhhcccC----------------CCC
Confidence 3577899999999999999999999999999999999999865321 11111111100 012
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec----CCccHHHHhhcCeeccCCCchHHHHHH
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM----GSGTAVAKSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~----~~~~~~~~~~ad~v~~~~~~~~i~~~i 737 (787)
|.--..+.+.+.-..+.+++|||+.||+.|.+.||+++++ +++.+..+..+|+++.+ +..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 223 (230)
T 3um9_A 155 QKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSD--VGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESS--HHHHHHTC
T ss_pred hHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCC--HHHHHHHH
Confidence 3334455666665667899999999999999999999999 56666667789999865 55565544
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=98.47 E-value=4.2e-07 Score=91.32 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=36.3
Q ss_pred CCEEEEEcC----CccCHHHHhhCCc-eEecCCccHHHHhhcCeec
Q 003909 685 NEVVAMTGD----GVNDAPALKKADI-GIAMGSGTAVAKSASDMVL 725 (787)
Q Consensus 685 ~~~v~~vGD----g~ND~~ml~~A~v-gia~~~~~~~~~~~ad~v~ 725 (787)
.+.|++||| +.||++||+.|+. |++|+|+.+.+|+.||+|.
T Consensus 201 ~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 201 YKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDTRRICELLFS 246 (246)
T ss_dssp CSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHHHHHHHHHCC
T ss_pred HHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHHHHHHHhhcC
Confidence 458999999 9999999999998 9999999999999999874
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.46 E-value=2.6e-07 Score=89.43 Aligned_cols=119 Identities=14% Similarity=0.131 Sum_probs=85.0
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.|++.+.++.|++.|++++++|+....... ..+.+|+.... ..++.......- ...|
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f----~~~~~~~~~~~~----------------Kp~~ 143 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF----TEILTSQSGFVR----------------KPSP 143 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE----EEEECGGGCCCC----------------TTSS
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe----eeEEecCcCCCC----------------CCCc
Confidence 46789999999999999999999999988888 88888876432 111111111000 0113
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EecCCccHHHHhhcCeeccCCCchHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMGSGTAVAKSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg-ia~~~~~~~~~~~ad~v~~~~~~~~i~~~i 737 (787)
+--..+.+.+.-..+.+++|||+.||++|++.||++ |+|+++. . .||+++.+ +..+.+++
T Consensus 144 ~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~---~a~~v~~~--~~el~~~l 204 (207)
T 2go7_A 144 EAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y---EGNHRIQA--LADISRIF 204 (207)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C---TTEEECSS--TTHHHHHT
T ss_pred HHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C---CCCEEeCC--HHHHHHHH
Confidence 333456666666677899999999999999999997 8898776 3 68998865 44555544
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.45 E-value=5.3e-07 Score=92.11 Aligned_cols=127 Identities=13% Similarity=0.062 Sum_probs=89.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+..... ..++..+....- ...|
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~----------------kp~~ 171 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP---ASTVFATDVVRG----------------RPFP 171 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC---SEEECGGGSSSC----------------TTSS
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC---ceEecHHhcCCC----------------CCCH
Confidence 467899999999999999999999999999999999888765311 112222211110 0123
Q ss_pred hhHHHHHHHHhhCC-CEEEEEcCCccCHHHHhhCC---ceEecCC------------------------ccHHHHhh-cC
Q 003909 672 SHKRMLVEALQNQN-EVVAMTGDGVNDAPALKKAD---IGIAMGS------------------------GTAVAKSA-SD 722 (787)
Q Consensus 672 ~~K~~~v~~l~~~~-~~v~~vGDg~ND~~ml~~A~---vgia~~~------------------------~~~~~~~~-ad 722 (787)
.--..+.+.+.-.. +.+++|||+.||+.|.+.|| ++|++|. +.+..++. +|
T Consensus 172 ~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad 251 (277)
T 3iru_A 172 DMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAH 251 (277)
T ss_dssp HHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCC
Confidence 33455666676667 88999999999999999999 4666662 34555554 99
Q ss_pred eeccCCCchHHHHHHHH
Q 003909 723 MVLADDNFATIVAAVAE 739 (787)
Q Consensus 723 ~v~~~~~~~~i~~~i~~ 739 (787)
+++.+ +..+..+++.
T Consensus 252 ~v~~~--~~el~~~l~~ 266 (277)
T 3iru_A 252 YVIDS--VADLETVITD 266 (277)
T ss_dssp EEESS--GGGTHHHHHH
T ss_pred EEecC--HHHHHHHHHH
Confidence 99965 6667777643
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.44 E-value=2.9e-07 Score=87.47 Aligned_cols=125 Identities=14% Similarity=0.119 Sum_probs=84.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHhC--CCCCccccccccccchhhccCChH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNK---------------STAESICHKIG--AFDHLVDFVGRSYTASEFEELPAM 654 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~---------------~~a~~~a~~~g--i~~~~~~~~~~~~~~~~~~~~~~~ 654 (787)
++.|++.++|++|+++|++++++|+++. ..+....+++| ++....+. ....+....
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~---~~~~~~~~~---- 99 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCP---HGPDDGCAC---- 99 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEEC---CCTTSCCSS----
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcC---CCCCCCCCC----
Confidence 5789999999999999999999999986 56677778888 43311000 000000000
Q ss_pred HHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc---eEecCCccHHHH----hhcCeeccC
Q 003909 655 QQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI---GIAMGSGTAVAK----SASDMVLAD 727 (787)
Q Consensus 655 ~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v---gia~~~~~~~~~----~~ad~v~~~ 727 (787)
....|+-=..+++.+.-..+.+++|||+.||+.|.+.||+ +|+.|++..... ..+|+++.+
T Consensus 100 ------------~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~ 167 (179)
T 3l8h_A 100 ------------RKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCED 167 (179)
T ss_dssp ------------STTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESS
T ss_pred ------------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecC
Confidence 0012333345666666667889999999999999999995 677776655554 457998865
Q ss_pred CCchHHHHHH
Q 003909 728 DNFATIVAAV 737 (787)
Q Consensus 728 ~~~~~i~~~i 737 (787)
+..+.+++
T Consensus 168 --l~el~~~l 175 (179)
T 3l8h_A 168 --LAAVAEQL 175 (179)
T ss_dssp --HHHHHHHH
T ss_pred --HHHHHHHH
Confidence 66666665
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.40 E-value=2.2e-07 Score=93.19 Aligned_cols=116 Identities=18% Similarity=0.217 Sum_probs=83.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|++++++|+.....+..+.+.+|+.... ..++.++.....+ ..|
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f----~~~~~~~~~~~~K----------------p~~ 173 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF----SEMLGGQSLPEIK----------------PHP 173 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC----SEEECTTTSSSCT----------------TSS
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE----EEEEecccCCCCC----------------cCH
Confidence 56789999999999999999999999999999999999986532 1122222111110 123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe-cCC----ccHHHHhhcCeeccC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-MGS----GTAVAKSASDMVLAD 727 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia-~~~----~~~~~~~~ad~v~~~ 727 (787)
+--..+++.+....+.+++|||+.||++|++.||++++ +.+ +.+..+..+|+++.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~ 234 (243)
T 2hsz_A 174 APFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD 234 (243)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS
T ss_pred HHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECC
Confidence 44455666666667789999999999999999999844 432 234456778998854
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=2.8e-07 Score=94.68 Aligned_cols=129 Identities=12% Similarity=0.062 Sum_probs=88.7
Q ss_pred CCCChhHHHHHHHHHhCCC--EEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 591 DPPREEVKNAMLSCMTAGI--RVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi--~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
-++.|++.++++.|++.|+ +++++|+.....+....+.+|+...... ++..+...... ....
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~----v~~~~~~~~~~------------~~~K 204 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDG----LTYCDYSRTDT------------LVCK 204 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSE----EECCCCSSCSS------------CCCT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccce----EEEeccCCCcc------------cCCC
Confidence 3578999999999999999 9999999999999999999998764311 11111100000 0001
Q ss_pred cChhhHHHHHHHHhhCC-CEEEEEcCCccCHHHHhhCCceEecCCccHHHH------hhcCeeccCCCchHHHHHH
Q 003909 669 VEPSHKRMLVEALQNQN-EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAK------SASDMVLADDNFATIVAAV 737 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~~-~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~------~~ad~v~~~~~~~~i~~~i 737 (787)
..|+--..+.+.+.-.. +.+++|||+.||+.|.+.||+|++|+++.+..+ ..||+++.+ +..+..++
T Consensus 205 p~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~s--l~el~~~l 278 (282)
T 3nuq_A 205 PHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISD--ILELPHVV 278 (282)
T ss_dssp TSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESS--GGGGGGTS
T ss_pred cCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCC--HHHHHHHh
Confidence 22333345555665566 789999999999999999999999875544333 367888864 55554443
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.37 E-value=1.1e-06 Score=87.15 Aligned_cols=125 Identities=12% Similarity=0.077 Sum_probs=82.2
Q ss_pred CCChhHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTA-GIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~-gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.+.|++.+.++.|++. |+++.++|+.....+....+.+|+..... ....+.+.... .+ ..
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~-~k--------------~~ 153 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP----FGAFADDALDR-NE--------------LP 153 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS----CEECTTTCSSG-GG--------------HH
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcC----cceecCCCcCc-cc--------------hH
Confidence 3578999999999999 99999999999999999999999875431 11111111000 00 00
Q ss_pred hhhHHHHHHHHh--hCCCEEEEEcCCccCHHHHhhCCc---eEecCCccHHHHhh--cCeeccCCCchHHHHHH
Q 003909 671 PSHKRMLVEALQ--NQNEVVAMTGDGVNDAPALKKADI---GIAMGSGTAVAKSA--SDMVLADDNFATIVAAV 737 (787)
Q Consensus 671 p~~K~~~v~~l~--~~~~~v~~vGDg~ND~~ml~~A~v---gia~~~~~~~~~~~--ad~v~~~~~~~~i~~~i 737 (787)
|.--..+.+.+. -..+.+++|||+.||+.|++.||+ +|+++++....... +|+++.+ +..+..++
T Consensus 154 ~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~--~~el~~~l 225 (234)
T 2hcf_A 154 HIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKN--FAETDEVL 225 (234)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESC--SCCHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCC--HHhHHHHH
Confidence 111133445554 345689999999999999999994 55555444443332 8999865 44455555
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.36 E-value=5e-07 Score=89.27 Aligned_cols=126 Identities=17% Similarity=0.284 Sum_probs=84.5
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCC-CccccccccccchhhccCChHHHHHhhccceEEEe--
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD-HLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR-- 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-- 668 (787)
++.|++.++++.|+++|++++++|+.+...+..+.+.+|+.. .... ..+.-. . ...+.+.
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~---~~~~~~-~-------------~~~~~~~~~ 148 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFA---NRLKFY-F-------------NGEYAGFDE 148 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEE---ECEEEC-T-------------TSCEEEECT
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEe---eeEEEc-C-------------CCcEecCCC
Confidence 688999999999999999999999999999999999999863 1110 000000 0 0000111
Q ss_pred ----cChhhHHHHHHHHhhC-C-CEEEEEcCCccCHHHHhhCCceEecCCc--cHHHHhhcCeeccCCCchHHHHH
Q 003909 669 ----VEPSHKRMLVEALQNQ-N-EVVAMTGDGVNDAPALKKADIGIAMGSG--TAVAKSASDMVLADDNFATIVAA 736 (787)
Q Consensus 669 ----~~p~~K~~~v~~l~~~-~-~~v~~vGDg~ND~~ml~~A~vgia~~~~--~~~~~~~ad~v~~~~~~~~i~~~ 736 (787)
+.+..|-.+++.+.+. | +.+++|||+.||+.|.+.||++|++++. .+.....+|+++.+ +..+..+
T Consensus 149 ~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~--~~el~~~ 222 (225)
T 1nnl_A 149 TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD--FVELLGE 222 (225)
T ss_dssp TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC--GGGGCC-
T ss_pred CCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecC--HHHHHHH
Confidence 1122455555544332 3 5789999999999999999999888743 34555678998854 4444443
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.35 E-value=7.1e-07 Score=88.47 Aligned_cols=122 Identities=13% Similarity=0.123 Sum_probs=84.5
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.|++.+.++.|+++|++++++|+.....+....+.+|+..... .++....... ....|
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~----~i~~~~~~~~----------------~Kp~~ 162 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD----SIIGSGDTGT----------------IKPSP 162 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----EEEEETSSSC----------------CTTSS
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhee----eEEcccccCC----------------CCCCh
Confidence 468999999999999999999999999999999999999865321 1111111100 00123
Q ss_pred hhHHHHHHHHhhCCC-EEEEEcCCccCHHHHhhCCc-eEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQNE-VVAMTGDGVNDAPALKKADI-GIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~-~v~~vGDg~ND~~ml~~A~v-gia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
+--..+.+.+.-..+ .+++|||+.||+.|.+.||+ +|.++++.+ ..+|+++.+ +..+..+++
T Consensus 163 ~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~---~~~~~~~~~--~~el~~~l~ 226 (231)
T 3kzx_A 163 EPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI---IKDILSFKN--FYDIRNFIC 226 (231)
T ss_dssp HHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC--------CCEEESS--HHHHHHHHH
T ss_pred HHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC---CCCceeeCC--HHHHHHHHH
Confidence 333556666666666 79999999999999999997 777876655 346777643 666666653
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=2e-06 Score=86.08 Aligned_cols=52 Identities=19% Similarity=0.266 Sum_probs=40.8
Q ss_pred hHHHHHHHHhhCCCEEEEEcC----CccCHHHHhhCC-ceEecCCccHHHHhhcCee
Q 003909 673 HKRMLVEALQNQNEVVAMTGD----GVNDAPALKKAD-IGIAMGSGTAVAKSASDMV 724 (787)
Q Consensus 673 ~K~~~v~~l~~~~~~v~~vGD----g~ND~~ml~~A~-vgia~~~~~~~~~~~ad~v 724 (787)
.|...++.+.+..+.|++||| |.||++||+.|+ +|++|+|+.+.+|..+++.
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~~~~~~~~~~ 243 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKDTIAEVEKII 243 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHHHHHHHHHHh
Confidence 455555444445568999999 699999999996 8999999999998876543
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.35 E-value=5.5e-07 Score=87.75 Aligned_cols=116 Identities=14% Similarity=0.086 Sum_probs=85.0
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|++.|++++++|+.....+....+.+|+..... .++..+..... ...|
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~----------------kp~~ 148 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFD----IVLSGEEFKES----------------KPNP 148 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEEGGGCSSC----------------TTSS
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhee----eEeecccccCC----------------CCCh
Confidence 467899999999999999999999999999999999999865331 11221111100 0123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCc--cHHHHhhcCeeccC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSG--TAVAKSASDMVLAD 727 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~--~~~~~~~ad~v~~~ 727 (787)
+--..+.+.+.-..+.+++|||+.||+.|.+.||+++++.+. .+..+..+|+++.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~ 206 (214)
T 3e58_A 149 EIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDS 206 (214)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESS
T ss_pred HHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHH
Confidence 344566666666677899999999999999999998887532 34444778998865
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.34 E-value=6e-07 Score=88.55 Aligned_cols=124 Identities=17% Similarity=0.165 Sum_probs=87.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|+++|++++++|+.....+..+.+.+|+..... .++.+.+... ....|
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~----~i~~~~~~~~----------------~Kp~~ 142 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFD----LIVGGDTFGE----------------KKPSP 142 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS----EEECTTSSCT----------------TCCTT
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHhe----EEEecCcCCC----------------CCCCh
Confidence 568999999999999999999999999999999999999864321 1122111100 01224
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EecC--CccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMG--SGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg-ia~~--~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
+--..+++.+....+.+++|||+.||+.|.+.||+. |++. ++.... ..+|+++.+ +..+..++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~--~~el~~~l~ 209 (222)
T 2nyv_A 143 TPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSR--PSDLVKLMD 209 (222)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESS--TTHHHHHHH
T ss_pred HHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECC--HHHHHHHHH
Confidence 444566666666677899999999999999999987 6654 222222 568888854 666666654
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=8.7e-07 Score=88.47 Aligned_cols=124 Identities=10% Similarity=0.090 Sum_probs=86.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|++++++|+.....+..+.+.+|+..... .++........ ...|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~----------------Kp~~ 164 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLD----SCLSADDLKIY----------------KPDP 164 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEEGGGTTCC----------------TTSH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcC----EEEEccccCCC----------------CCCH
Confidence 467999999999999999999999999999999999999865321 12222111100 1223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe---cCCccHHHHhhc-CeeccCCCchHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA---MGSGTAVAKSAS-DMVLADDNFATIVAAV 737 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia---~~~~~~~~~~~a-d~v~~~~~~~~i~~~i 737 (787)
+--..+.+.+.-..+.+++|||+.||+.|.+.||+.++ .++..+..+..+ |+++.+ +..+..++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~--~~el~~~l 232 (240)
T 2no4_A 165 RIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNS--LSELWPLL 232 (240)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESS--GGGHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCC--HHHHHHHH
Confidence 34445566666566789999999999999999996544 444333344557 888854 66666655
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.32 E-value=4e-07 Score=90.35 Aligned_cols=124 Identities=10% Similarity=0.178 Sum_probs=87.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|++++++|+.+...+....+.+|+.... ..++....... ....|
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~----------------~Kp~~ 154 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF----DHLLSVDPVQV----------------YKPDN 154 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEESGGGTC----------------CTTSH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhh----heEEEecccCC----------------CCCCH
Confidence 46799999999999999999999999999999999999986532 11111111110 01223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec----CCccHHHHhhcCeeccCCCchHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM----GSGTAVAKSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~----~~~~~~~~~~ad~v~~~~~~~~i~~~i 737 (787)
+--..+.+.+.-..+.+++|||+.||+.|.+.||+++++ ++..+..+..+|+++.+ +..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 222 (232)
T 1zrn_A 155 RVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS--LRAVVELF 222 (232)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS--HHHHHTTC
T ss_pred HHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECC--HHHHHHHH
Confidence 344456666665667899999999999999999999888 33334445668988854 55555544
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.32 E-value=7.3e-07 Score=90.21 Aligned_cols=126 Identities=17% Similarity=0.133 Sum_probs=88.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccc-cccchhhc-cCChHHHHHhhccceEEEec
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGR-SYTASEFE-ELPAMQQTVALQHMALFTRV 669 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~v~~~~ 669 (787)
.+.|++.+.++.|++.|++++++|+.....+....+.+|+.... .. ++..+... .- ..
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~i~~~~~~~~~~----------------Kp 169 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELA----GEHIYDPSWVGGRG----------------KP 169 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHH----CSCEECGGGGTTCC----------------TT
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhc----cceEEeHhhcCcCC----------------CC
Confidence 46789999999999999999999999999999999999985422 11 22222111 10 11
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EecCCc-------cHHHH-hhcCeeccCCCchHHHHHHHH
Q 003909 670 EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMGSG-------TAVAK-SASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg-ia~~~~-------~~~~~-~~ad~v~~~~~~~~i~~~i~~ 739 (787)
.|+--..+.+.+.-..+.+++|||+.||+.|.+.||++ |.+.++ .+..+ ..+|+++.+ +..+.++++.
T Consensus 170 ~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~--l~el~~~l~~ 246 (259)
T 4eek_A 170 HPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTS--HAELRAALAE 246 (259)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECS--HHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCC--HHHHHHHHHh
Confidence 23333455555555567899999999999999999998 445433 23343 458999864 7778777754
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.30 E-value=4.4e-06 Score=83.34 Aligned_cols=125 Identities=12% Similarity=0.144 Sum_probs=86.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.|++.+.++.|+++|++++++|+.....+....+.+|+.... ..++..+....- ...|
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~~----------------Kp~~ 153 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF----EHVIISDFEGVK----------------KPHP 153 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC----SEEEEGGGGTCC----------------TTCH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc----cEEEEeCCCCCC----------------CCCH
Confidence 46789999999999999999999999999999999999986532 111221111100 0122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCceEec---CCccHHHHh---hcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIGIAM---GSGTAVAKS---ASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~vgia~---~~~~~~~~~---~ad~v~~~~~~~~i~~~i~ 738 (787)
+--..+.+.+....+.+++|||+. ||+.|.+.||++++. +.+...... .+|+++.+ +..+..++.
T Consensus 154 ~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~l~ 225 (241)
T 2hoq_A 154 KIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDN--LESLLEVLA 225 (241)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESS--TTHHHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECC--HHHHHHHHH
Confidence 333455566655667899999998 999999999997654 443444443 68998854 666666653
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.26 E-value=1.6e-06 Score=86.71 Aligned_cols=126 Identities=14% Similarity=0.100 Sum_probs=84.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|++++++|+.....+....+. |+...... ..++.+.....- ...|
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~--d~i~~~~~~~~~----------------kp~~ 169 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHK--ELMVTAFDVKYG----------------KPNP 169 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCG--GGEECTTTCSSC----------------TTSS
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCc--ceEEeHHhCCCC----------------CCCh
Confidence 5678999999999999999999999998887777777 77653200 111222211100 1223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EecCCccHH----HHhhcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMGSGTAV----AKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg-ia~~~~~~~----~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
+--..+.+.+.-..+.+++|||+.||+.|.+.||++ |.+.++... .+..||+++.+ +..+..+++
T Consensus 170 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s--~~el~~~l~ 239 (243)
T 3qxg_A 170 EPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPS--MQTLCDSWD 239 (243)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESC--HHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECC--HHHHHHHHH
Confidence 333455555555667899999999999999999994 455544322 23369999864 666766664
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.26 E-value=2.1e-06 Score=85.80 Aligned_cols=127 Identities=13% Similarity=0.078 Sum_probs=83.6
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.++.|++.+.++.|++.|++++++|+.....+....+. |+...... ..++.+.....- ...
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~--~~~~~~~~~~~~----------------kp~ 167 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQA--NLMVTAFDVKYG----------------KPN 167 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCG--GGEECGGGCSSC----------------TTS
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCC--CeEEecccCCCC----------------CCC
Confidence 35779999999999999999999999998887777777 87653200 111222211110 122
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EecCCccH---H-HHhhcCeeccCCCchHHHHHHH
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMGSGTA---V-AKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg-ia~~~~~~---~-~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
|+--..+.+.+.-..+.+++|||+.||+.|.+.||+. |.+.++.. . .+..||+++.+ +..+..+++
T Consensus 168 ~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~--~~el~~~l~ 238 (247)
T 3dv9_A 168 PEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHS--MPDFNKNWE 238 (247)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESS--HHHHHHHHH
T ss_pred CHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECC--HHHHHHHHH
Confidence 3444566666666677899999999999999999975 44443322 2 22379999865 666766664
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.25 E-value=1.8e-06 Score=85.78 Aligned_cols=122 Identities=11% Similarity=0.075 Sum_probs=86.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.|++.++++.|+ .|++++++|+.....+....+.+|+..... .++.......- ...|
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~----------------kp~~ 165 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFK----KIILSEDLGVL----------------KPRP 165 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCS----EEEEGGGTTCC----------------TTSH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhce----eEEEeccCCCC----------------CCCH
Confidence 46789999999999 999999999999999999999999865321 11111111100 0122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCceEecCCccH--HHHhhcCeeccCCCchHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIGIAMGSGTA--VAKSASDMVLADDNFATIVAA 736 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~vgia~~~~~~--~~~~~ad~v~~~~~~~~i~~~ 736 (787)
.--..+.+.+.-..+.+++|||+. ||+.|.+.||++++|.+... ..+..+|+++.+ +..+..+
T Consensus 166 ~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~s--l~e~~~~ 231 (240)
T 3qnm_A 166 EIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHS--LKELMNL 231 (240)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESS--THHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECC--HHHHHHH
Confidence 233344555555567899999995 99999999999999985554 566679999976 4455444
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=2.1e-06 Score=83.80 Aligned_cols=135 Identities=20% Similarity=0.197 Sum_probs=83.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCC---------------HHHHHHHHHHhCCCCCccccccccccchhhccCChHHH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDN---------------KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQ 656 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~---------------~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (787)
++.|++.++|++|+++|++++++|++. ...+..+.+++|+... .........+.....
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~f~-----~~~~~~~~~~~~~~~-- 122 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD-----GIYYCPHHPQGSVEE-- 122 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS-----EEEEECCBTTCSSGG--
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCceE-----EEEECCcCCCCcccc--
Confidence 688999999999999999999999999 4677888888898511 000000000000000
Q ss_pred HHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce--Eec--CCc-cHHHHhhcCeeccCCCch
Q 003909 657 TVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG--IAM--GSG-TAVAKSASDMVLADDNFA 731 (787)
Q Consensus 657 ~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg--ia~--~~~-~~~~~~~ad~v~~~~~~~ 731 (787)
...........|+--..+.+.+.-..+.+++|||+.||+.|.+.||+. |.+ +.. .+.....+|+++.+ +.
T Consensus 123 ---~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~--l~ 197 (211)
T 2gmw_A 123 ---FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS--LA 197 (211)
T ss_dssp ---GBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC--GG
T ss_pred ---cCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCC--HH
Confidence 000000001223333455666665667899999999999999999964 444 322 33344568998854 66
Q ss_pred HHHHHHH
Q 003909 732 TIVAAVA 738 (787)
Q Consensus 732 ~i~~~i~ 738 (787)
.+..++.
T Consensus 198 el~~~l~ 204 (211)
T 2gmw_A 198 DLPQAIK 204 (211)
T ss_dssp GHHHHHH
T ss_pred HHHHHHH
Confidence 6666653
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.23 E-value=4.8e-07 Score=90.99 Aligned_cols=116 Identities=12% Similarity=0.110 Sum_probs=77.0
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-hCCCCCccccccccccch--hhccCChHHHHHhhccceEEEe
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK-IGAFDHLVDFVGRSYTAS--EFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~-~gi~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
.+.|++.++++.|++.|++++++|+.....+.....+ .|+.... ..++..+ ....- .
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f----~~~~~~~~~~~~~~----------------K 171 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLF----SHIVLGDDPEVQHG----------------K 171 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTS----SCEECTTCTTCCSC----------------T
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhhe----eeEEecchhhccCC----------------C
Confidence 5788999999999999999999999987765543322 3433221 1111111 11000 0
Q ss_pred cChhhHHHHHHHHhhCC--CEEEEEcCCccCHHHHhhCC---ceEecCCccHHHHhhcCeeccC
Q 003909 669 VEPSHKRMLVEALQNQN--EVVAMTGDGVNDAPALKKAD---IGIAMGSGTAVAKSASDMVLAD 727 (787)
Q Consensus 669 ~~p~~K~~~v~~l~~~~--~~v~~vGDg~ND~~ml~~A~---vgia~~~~~~~~~~~ad~v~~~ 727 (787)
..|+--..+.+.+.... +.+++|||+.||+.|.+.|| ++|+++++.+..+..||+++.+
T Consensus 172 p~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~s 235 (250)
T 3l5k_A 172 PDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNS 235 (250)
T ss_dssp TSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSC
T ss_pred CChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecC
Confidence 11222233344443334 78999999999999999999 5666688778888999999965
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.21 E-value=2.5e-06 Score=85.17 Aligned_cols=122 Identities=11% Similarity=0.169 Sum_probs=83.6
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChh
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPS 672 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 672 (787)
+.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+. ... .++.++....- ...|+
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~----~~~~~~~~~~~----------------Kp~p~ 169 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFD----FALGEKSGIRR----------------KPAPD 169 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCS----EEEEECTTSCC----------------TTSSH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-cee----EEEecCCCCCC----------------CCCHH
Confidence 5688999999999999999999999998889999999975 321 11111111000 01233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce---EecCCcc-HHHHh-hcCeeccCCCchHHHHHH
Q 003909 673 HKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG---IAMGSGT-AVAKS-ASDMVLADDNFATIVAAV 737 (787)
Q Consensus 673 ~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg---ia~~~~~-~~~~~-~ad~v~~~~~~~~i~~~i 737 (787)
-=..+.+.+.-..+.+++|||+.||+.|.+.||+. |+++++. +..++ .+|+++.+ +..+..++
T Consensus 170 ~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~--~~el~~~l 237 (240)
T 2hi0_A 170 MTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDT--AEKLEEAI 237 (240)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECS--HHHHHHHH
T ss_pred HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECC--HHHHHHHh
Confidence 33455566665677899999999999999999994 4555433 44443 68988854 55555444
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.21 E-value=2e-06 Score=83.23 Aligned_cols=120 Identities=11% Similarity=0.182 Sum_probs=83.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+ ++.|+++ ++++++|+.+...+..+.+.+|+.... ..++.+.....- ...|
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~~----------------Kp~~ 131 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF----KGIFSAESVKEY----------------KPSP 131 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEEGGGGTCC----------------TTCH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC----cEEEehhhcCCC----------------CCCH
Confidence 46789999 9999999 999999999999999999999986532 112222211100 0123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec----CCccHHHHhhcCeeccCCCchHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM----GSGTAVAKSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~----~~~~~~~~~~ad~v~~~~~~~~i~~~i 737 (787)
+--..+++.+. .+.+++|||+.||+.|.+.||+++++ +++.+..+..+|+++.+ +..+..++
T Consensus 132 ~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 197 (201)
T 2w43_A 132 KVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVND--FKELYEWI 197 (201)
T ss_dssp HHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESS--HHHHHHHH
T ss_pred HHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECC--HHHHHHHH
Confidence 33345566665 66788999999999999999999877 33333445568888754 55665554
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.20 E-value=3e-06 Score=84.10 Aligned_cols=124 Identities=10% Similarity=0.082 Sum_probs=86.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.|++.++++.|++. ++++++|+.....+....+.+|+..... .++.......- ...|
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~----------------kp~~ 161 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFK----DIFVSEDTGFQ----------------KPMK 161 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCS----EEEEGGGTTSC----------------TTCH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhh----eEEEecccCCC----------------CCCh
Confidence 5778999999999999 9999999999999999999999865321 11111111100 0122
Q ss_pred hhHHHHHHHHh-hCCCEEEEEcCCc-cCHHHHhhCCceE-ecC--CccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQ-NQNEVVAMTGDGV-NDAPALKKADIGI-AMG--SGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~-~~~~~v~~vGDg~-ND~~ml~~A~vgi-a~~--~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
.--..+.+.+. -..+.+++|||+. ||+.|.+.||++. .++ +..+..+..+|+++.+ +..+..+++
T Consensus 162 ~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~--~~el~~~l~ 231 (238)
T 3ed5_A 162 EYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRK--LEELYHILN 231 (238)
T ss_dssp HHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESS--GGGHHHHHT
T ss_pred HHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECC--HHHHHHHHH
Confidence 22334444444 3456899999998 9999999999954 444 3366677789999865 667777664
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.19 E-value=1.9e-06 Score=88.08 Aligned_cols=115 Identities=13% Similarity=0.004 Sum_probs=82.5
Q ss_pred CChhHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 593 PREEVKNAMLSCMTA-GIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~-gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+... ..++.+++...-. ..|
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f-----~~i~~~~~~~~~k----------------p~~ 173 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRP-----EYFITANDVKQGK----------------PHP 173 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCC-----SSEECGGGCSSCT----------------TSS
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCcc-----CEEEEcccCCCCC----------------CCh
Confidence 568999999999999 999999999999999999999988631 1222222211110 123
Q ss_pred hhHHHHHHHHhh-------CCCEEEEEcCCccCHHHHhhCCceEec---CCccHHHHh-hcCeeccCC
Q 003909 672 SHKRMLVEALQN-------QNEVVAMTGDGVNDAPALKKADIGIAM---GSGTAVAKS-ASDMVLADD 728 (787)
Q Consensus 672 ~~K~~~v~~l~~-------~~~~v~~vGDg~ND~~ml~~A~vgia~---~~~~~~~~~-~ad~v~~~~ 728 (787)
+--..+.+.+.. ..+.+++|||+.||+.|++.||+++++ +++.+..++ .||+++.+.
T Consensus 174 ~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~ 241 (275)
T 2qlt_A 174 EPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNH 241 (275)
T ss_dssp HHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSG
T ss_pred HHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECCh
Confidence 333455666665 667799999999999999999977665 544455554 589998654
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.19 E-value=1.8e-06 Score=86.79 Aligned_cols=121 Identities=12% Similarity=0.090 Sum_probs=87.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|++. ++++++|+.....+..+.+.+|+.. ..++..+....- ...|
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f------~~~~~~~~~~~~----------------kp~~ 176 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW------DMLLCADLFGHY----------------KPDP 176 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC------SEECCHHHHTCC----------------TTSH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc------ceEEeecccccC----------------CCCH
Confidence 4578999999999986 9999999999999999999999851 112222211110 0223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCC--------ccHHH--HhhcCeeccCCCchHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGS--------GTAVA--KSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~--------~~~~~--~~~ad~v~~~~~~~~i~~~i 737 (787)
.--..+.+.+.-..+.+++|||+.||+.|++.||++++|.+ +.+.+ +..||+++.+ +..+..++
T Consensus 177 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~--l~el~~~l 250 (254)
T 3umc_A 177 QVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASD--LLDLHRQL 250 (254)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESS--HHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECC--HHHHHHHh
Confidence 33345566666567789999999999999999999999976 22333 6678999865 66676665
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.19 E-value=2.5e-06 Score=85.95 Aligned_cols=123 Identities=11% Similarity=0.160 Sum_probs=87.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+ |++++++|+.+...+..+.+.+|+.... ..++..+....- ...|
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f----~~~~~~~~~~~~----------------Kp~~ 150 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF----DAVISVDAKRVF----------------KPHP 150 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEEGGGGTCC----------------TTSH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc----cEEEEccccCCC----------------CCCH
Confidence 57799999999999 9999999999999999999999986532 112222111100 1223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCc---------------------------cHHHHhhcCee
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSG---------------------------TAVAKSASDMV 724 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~---------------------------~~~~~~~ad~v 724 (787)
+--..+.+.+.-..+.+++|||+.||+.|.+.||+++++.+. .+..+..+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (253)
T 1qq5_A 151 DSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFV 230 (253)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEE
T ss_pred HHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCee
Confidence 344555666655567899999999999999999999988755 22334568888
Q ss_pred ccCCCchHHHHHHH
Q 003909 725 LADDNFATIVAAVA 738 (787)
Q Consensus 725 ~~~~~~~~i~~~i~ 738 (787)
+.+ +..+..++.
T Consensus 231 ~~~--~~el~~~l~ 242 (253)
T 1qq5_A 231 VPA--LGDLPRLVR 242 (253)
T ss_dssp ESS--GGGHHHHHH
T ss_pred eCC--HHHHHHHHH
Confidence 854 666766663
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.19 E-value=3.7e-06 Score=80.28 Aligned_cols=107 Identities=19% Similarity=0.089 Sum_probs=74.0
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChh
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPS 672 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 672 (787)
+.|++.+.++.|++.|++++++|+... .+....+.+|+.... ..++.+.....- ...|+
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f----~~~~~~~~~~~~----------------kp~~~ 141 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF----TEVVTSSSGFKR----------------KPNPE 141 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE----EEEECGGGCCCC----------------TTSCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe----eeeeeccccCCC----------------CCCHH
Confidence 678999999999999999999999864 567788888875432 111111111000 01123
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcC
Q 003909 673 HKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD 722 (787)
Q Consensus 673 ~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad 722 (787)
--..+.+.+.-. .+++|||+.||++|++.||+++++-+.....++..+
T Consensus 142 ~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~l~ 189 (190)
T 2fi1_A 142 SMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHT
T ss_pred HHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCCCChhhccC
Confidence 233444444433 788999999999999999999998877777776654
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.18 E-value=3.4e-06 Score=83.19 Aligned_cols=125 Identities=14% Similarity=0.167 Sum_probs=83.2
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.+++.+.++.++. +++++|+..........+++|+..... ..++..+....-. ....|
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~---~~~~~~~~~~~~~--------------~kpk~ 146 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFA---PHIYSAKDLGADR--------------VKPKP 146 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTT---TCEEEHHHHCTTC--------------CTTSS
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhcc---ceEEeccccccCC--------------CCcCH
Confidence 356778888887764 899999999999999999998864320 1111111110000 00122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EecCCccH-------HHHhh-cCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMGSGTA-------VAKSA-SDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg-ia~~~~~~-------~~~~~-ad~v~~~~~~~~i~~~i~ 738 (787)
.--..+++.+.-..+.+++|||+.||++|++.||++ |+++++.. .+++. ||+++.+ +..+..+++
T Consensus 147 ~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~--~~el~~~l~ 220 (229)
T 2fdr_A 147 DIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISR--MQDLPAVIA 220 (229)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHHH
T ss_pred HHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecC--HHHHHHHHH
Confidence 333455566665667899999999999999999998 77776543 47777 9999965 555666553
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.18 E-value=1.8e-06 Score=85.40 Aligned_cols=116 Identities=11% Similarity=0.051 Sum_probs=82.8
Q ss_pred CCChhHHHHHHHHHhCC-CEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAG-IRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~g-i~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
++.|++.+.++.|++.| ++++++|+..........+.+|+...... +++...
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~---------------------------~~~~~k 157 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDH---------------------------IEVMSD 157 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSE---------------------------EEEESC
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhhe---------------------------eeecCC
Confidence 56789999999999999 99999999999888999999998653211 222222
Q ss_pred --hhhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCceEec-------CCccHHHHhhc-CeeccCCCchHHHHH
Q 003909 671 --PSHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIGIAM-------GSGTAVAKSAS-DMVLADDNFATIVAA 736 (787)
Q Consensus 671 --p~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~vgia~-------~~~~~~~~~~a-d~v~~~~~~~~i~~~ 736 (787)
|+--..+.+.+.-..+.+++|||+. ||+.|.+.||+++++ +++....+..+ |+++.+ +..+..+
T Consensus 158 pk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~--l~el~~~ 232 (234)
T 3ddh_A 158 KTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKR--LDDLLSL 232 (234)
T ss_dssp CSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSS--GGGHHHH
T ss_pred CCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceeccc--HHHHHHh
Confidence 3333445555555567899999996 999999999998887 33433334444 888865 5555554
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.17 E-value=2.2e-06 Score=91.10 Aligned_cols=109 Identities=11% Similarity=0.100 Sum_probs=71.7
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe-
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR- 668 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 668 (787)
.-.+.|++++.|+.|+++|++|+|+||.....++.+|+++|+...... ..++ +..+.... ...+-.+
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~--~~Vi-g~~l~~~~---------dG~~tg~~ 286 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKE--EKVL-GLRLMKDD---------EGKILPKF 286 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCG--GGEE-EECEEECT---------TCCEEEEE
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCc--ceEE-EeEEEEec---------CCceeeee
Confidence 345899999999999999999999999999999999999987432110 0000 10000000 0001111
Q ss_pred ------cChhhHHHHHHHHhhC---CCEEEEEcCCccCHHHHhh-CCceEec
Q 003909 669 ------VEPSHKRMLVEALQNQ---NEVVAMTGDGVNDAPALKK-ADIGIAM 710 (787)
Q Consensus 669 ------~~p~~K~~~v~~l~~~---~~~v~~vGDg~ND~~ml~~-A~vgia~ 710 (787)
+..+.|...++.+... ...++++|||.||++||+. +|.++++
T Consensus 287 ~~~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~l 338 (385)
T 4gxt_A 287 DKDFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSL 338 (385)
T ss_dssp CTTSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEE
T ss_pred cCccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEE
Confidence 2356799988876432 2357888999999999986 4444443
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.16 E-value=5.6e-07 Score=87.70 Aligned_cols=114 Identities=12% Similarity=0.141 Sum_probs=80.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++ ++++++|+.+...+..+.+.+|+.... ..++.......- .-.|
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~~----------------KP~~ 141 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM----AVTISADDTPKR----------------KPDP 141 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE----EEEECGGGSSCC----------------TTSS
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc----cEEEecCcCCCC----------------CCCc
Confidence 4678999999999999 999999999999889898888875432 111111111000 0113
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCC----ccHHHHhhcCeeccC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGS----GTAVAKSASDMVLAD 727 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~----~~~~~~~~ad~v~~~ 727 (787)
+--..+.+.+.-..+.+++|||+.||+.|.+.||+++++.+ +.+..++ ||+++.+
T Consensus 142 ~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~ 200 (209)
T 2hdo_A 142 LPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQK 200 (209)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESS
T ss_pred HHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCC
Confidence 33345555555556789999999999999999999999743 3455555 9999865
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.12 E-value=4.2e-06 Score=83.93 Aligned_cols=123 Identities=11% Similarity=0.051 Sum_probs=86.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|++. ++++++|+.....+..+.+.+|+.. ..++..+...... ..|
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f------~~~~~~~~~~~~k----------------p~~ 172 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW------DVIIGSDINRKYK----------------PDP 172 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC------SCCCCHHHHTCCT----------------TSH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe------eEEEEcCcCCCCC----------------CCH
Confidence 5678999999999997 9999999999999999999999851 1122222211111 112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccH--------H--HHhhcCeeccCCCchHHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTA--------V--AKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~--------~--~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
.--..+.+.+.-..+.+++|||+.||+.|.+.||++++|.+... . .+..+|+++.+ +..+..++..
T Consensus 173 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~--~~el~~~l~~ 248 (254)
T 3umg_A 173 QAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATD--ITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESS--HHHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECC--HHHHHHHhcC
Confidence 22234444444456789999999999999999999999975221 1 25678999854 7777777643
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.11 E-value=2.8e-06 Score=86.15 Aligned_cols=124 Identities=16% Similarity=0.238 Sum_probs=87.5
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|+++|++++++|+.... +..+.+.+|+.... ..++...+.... ...|
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f----~~~~~~~~~~~~----------------Kp~~ 164 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHF----DFVLTSEAAGWP----------------KPDP 164 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGC----SCEEEHHHHSSC----------------TTSH
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhh----hEEEeecccCCC----------------CCCH
Confidence 36799999999999999999999997764 68888899986533 112222211110 1234
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCceEecCCccHH------HHhhcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIGIAMGSGTAV------AKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~vgia~~~~~~~------~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
+--..+++.+.-..+.+++|||+. ||+.|.+.||+++++.+.... ....+|+++.+ +..+..+++
T Consensus 165 ~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~--l~el~~~l~ 236 (263)
T 3k1z_A 165 RIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPS--LAHLLPALD 236 (263)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESS--GGGHHHHHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCC--HHHHHHHHH
Confidence 444566666666678899999997 999999999999998643322 22268998864 777777764
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.10 E-value=2.8e-06 Score=82.91 Aligned_cols=113 Identities=17% Similarity=0.199 Sum_probs=78.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|++ |+++.++|+.+...+....+.+|+...... ++..+ ..-+ ..|
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~----i~~~~--~~~K----------------p~p 140 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDG----IYGSS--PEAP----------------HKA 140 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSE----EEEEC--SSCC----------------SHH
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheee----eecCC--CCCC----------------CCh
Confidence 467899999999999 999999999999888889999998654311 11110 0000 112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc---eEecCCc-cHHHHh-hcCeeccC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI---GIAMGSG-TAVAKS-ASDMVLAD 727 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v---gia~~~~-~~~~~~-~ad~v~~~ 727 (787)
+-=..+.+.+.-..+.+++|||+.||+.|.+.||+ +|+++++ .+..+. .+|+++.+
T Consensus 141 ~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~ 201 (210)
T 2ah5_A 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK 201 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS
T ss_pred HHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECC
Confidence 21223334444445679999999999999999999 7777755 444543 58998865
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.09 E-value=4.8e-06 Score=82.86 Aligned_cols=137 Identities=16% Similarity=0.167 Sum_probs=88.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHH--hhccceEEEec
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTV--ALQHMALFTRV 669 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~ 669 (787)
++.|++.++++.|+++|++++++|+.+...+..+.+ |+... ..++..+....-. .... .-.....+.+.
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-----~~v~~~~~~~~~~--~~~~~~~kp~p~~~~~~ 147 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-----DRIYCNHASFDND--YIHIDWPHSCKGTCSNQ 147 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-----GGEEEEEEECSSS--BCEEECTTCCCTTCCSC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-----CeEEeeeeEEcCC--ceEEecCCCCccccccc
Confidence 578999999999999999999999999988888887 66432 1122111110000 0000 00000000000
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhh--cCeeccCCCchHHHHHHHH
Q 003909 670 EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA--SDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~--ad~v~~~~~~~~i~~~i~~ 739 (787)
....|..+++.+....+.+++|||+.+|+.|.+.||+.++..+..+..... +|+++. ++..+..++..
T Consensus 148 ~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~--~~~el~~~l~~ 217 (236)
T 2fea_A 148 CGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQ--DFYEIRKEIEN 217 (236)
T ss_dssp CSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCS--SHHHHHHHHHT
T ss_pred cCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeecC--CHHHHHHHHHH
Confidence 134688889988877889999999999999999999998754323334333 677764 47777766643
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.3e-05 Score=76.75 Aligned_cols=136 Identities=13% Similarity=0.138 Sum_probs=92.0
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCH---HHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEE
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNK---STAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~---~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
-++.|++.+++++|+++|++++++|+.+. ..+..+.+.+|+..... .++...+..... -..
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd----~i~~~~~~~~~~------------~~~ 96 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFD----FIYASNSELQPG------------KME 96 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEE----EEEECCTTSSTT------------CCC
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheE----EEEEcccccccc------------CCC
Confidence 36889999999999999999999999876 88899999999875431 111111100000 000
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCC-ccCHHHHhhCCceEe-cCCccH-----HHH-hhcCeeccCCCchHHHHHHHH
Q 003909 668 RVEPSHKRMLVEALQNQNEVVAMTGDG-VNDAPALKKADIGIA-MGSGTA-----VAK-SASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~~~~~v~~vGDg-~ND~~ml~~A~vgia-~~~~~~-----~~~-~~ad~v~~~~~~~~i~~~i~~ 739 (787)
...|+--..+++.+....+.+++|||+ .+|+.+-+.||+... +.++.. ... ..+|+++...++..+.++++.
T Consensus 97 KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l 176 (189)
T 3ib6_A 97 KPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLL 176 (189)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHH
T ss_pred CcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHH
Confidence 122334455666666667789999999 699999999999654 433221 111 167888886678888888876
Q ss_pred HHH
Q 003909 740 GRA 742 (787)
Q Consensus 740 gR~ 742 (787)
.+.
T Consensus 177 ~~~ 179 (189)
T 3ib6_A 177 LKK 179 (189)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.06 E-value=4.5e-06 Score=84.87 Aligned_cols=44 Identities=14% Similarity=0.078 Sum_probs=38.0
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHhCCCC
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTG---DNKSTAESICHKIGAFD 633 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TG---d~~~~a~~~a~~~gi~~ 633 (787)
.+.+-|+++++|++++++|++++++|| |+........+.+|+..
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~ 68 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV 68 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence 455678999999999999999999999 77777778888889863
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.05 E-value=3.2e-06 Score=85.84 Aligned_cols=43 Identities=12% Similarity=0.040 Sum_probs=37.4
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcC---CCHHHHHHHHHHhCCCC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTG---DNKSTAESICHKIGAFD 633 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TG---d~~~~a~~~a~~~gi~~ 633 (787)
+++.++++++|++|+++|++++++|| |+........+++|+..
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 45668999999999999999999988 77778888888999864
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=98.04 E-value=6.5e-06 Score=81.67 Aligned_cols=122 Identities=11% Similarity=0.147 Sum_probs=82.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|++ |++++++|+.....+....+.++- .. ..++...+.... ...|
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~--~f----d~i~~~~~~~~~----------------KP~~ 155 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV--EF----DHIITAQDVGSY----------------KPNP 155 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS--CC----SEEEEHHHHTSC----------------TTSH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC--cc----CEEEEccccCCC----------------CCCH
Confidence 578999999999999 899999999998888777666442 11 122222221111 1223
Q ss_pred hhHHHH---HHHHhhCCCEEEEEcCCc-cCHHHHhhCCceEecCCcc-----------HHHHhhcCeeccCCCchHHHHH
Q 003909 672 SHKRML---VEALQNQNEVVAMTGDGV-NDAPALKKADIGIAMGSGT-----------AVAKSASDMVLADDNFATIVAA 736 (787)
Q Consensus 672 ~~K~~~---v~~l~~~~~~v~~vGDg~-ND~~ml~~A~vgia~~~~~-----------~~~~~~ad~v~~~~~~~~i~~~ 736 (787)
.-.... .+.+.-..+.+++|||+. ||+.|.+.||++++|.+.. +..+..||+++.+ +..+..+
T Consensus 156 ~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~--~~el~~~ 233 (240)
T 3smv_A 156 NNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNS--MGEMAEA 233 (240)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESS--HHHHHHH
T ss_pred HHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCC--HHHHHHH
Confidence 333344 344444567899999996 9999999999999995432 3344779999964 6667666
Q ss_pred HH
Q 003909 737 VA 738 (787)
Q Consensus 737 i~ 738 (787)
++
T Consensus 234 l~ 235 (240)
T 3smv_A 234 HK 235 (240)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.03 E-value=7.1e-06 Score=78.36 Aligned_cols=96 Identities=10% Similarity=0.084 Sum_probs=69.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCC-HHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDN-KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~-~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
++.|++.++|++|+++|++++++||++ ...+..+.+.+|+....... .++....
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~-------------------------~~~~~~k 122 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHR-------------------------EIYPGSK 122 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEE-------------------------EESSSCH
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhccee-------------------------EEEeCch
Confidence 578999999999999999999999999 79999999999987642110 0000011
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe-cCC
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-MGS 712 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia-~~~ 712 (787)
|+.-..+.+.+....+.+++|||+.+|+.+.+.||+... +..
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~ 165 (187)
T 2wm8_A 123 ITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQN 165 (187)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSS
T ss_pred HHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECC
Confidence 222233444444455678999999999999999998644 443
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.00 E-value=2.1e-05 Score=71.65 Aligned_cols=106 Identities=13% Similarity=0.269 Sum_probs=69.9
Q ss_pred cChhHHHHHHHHHHc-CCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeCCeeEEEEeCC
Q 003909 435 GEATEVALRVLAEKV-GLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGA 513 (787)
Q Consensus 435 ~~~~~~al~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~~~~~~~~kG~ 513 (787)
.||..+|++++++.. |+..... . . ......+|+...++..|.+ ++ ..+.+|+
T Consensus 50 eHPla~AIv~~A~~~~~l~~~~~----------~------------~-~~~~~~~F~a~~G~~Gv~v--~G--~~v~vGn 102 (156)
T 1svj_A 50 ETPEGRSIVILAKQRFNLRERDV----------Q------------S-LHATFVPFTAQSRMSGINI--DN--RMIRKGS 102 (156)
T ss_dssp CSHHHHHHHHHHHHHTTCCCCCH----------H------------H-HTCEEEEEETTTTEEEEEE--TT--EEEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCcccc----------c------------c-cccceeeccccCCCCeEEE--CC--EEEEEeC
Confidence 589999999999887 6543200 0 0 0122457877777666644 44 4578999
Q ss_pred hHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCC
Q 003909 514 PESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPP 593 (787)
Q Consensus 514 ~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~ 593 (787)
++.|.+.+... |. .... .+.+..++++. +|.+++.+| .|.+++|+|++.|++
T Consensus 103 ~~~i~~l~~~~-----gi--~~~~----~~~~~~~~la~-~G~T~v~VA----------------~d~~l~GvIalaD~i 154 (156)
T 1svj_A 103 VDAIRRHVEAN-----GG--HFPT----DVDQKVDQVAR-QGATPLVVV----------------EGSRVLGVIALKDIV 154 (156)
T ss_dssp HHHHHHHHHHH-----TC--CCCH----HHHHHHHHHHH-TTCEEEEEE----------------ETTEEEEEEEEEECC
T ss_pred cHHHHHHHHHc-----CC--CCcH----HHHHHHHHHHh-CCCCEEEEE----------------ECCEEEEEEEEecCC
Confidence 88776655321 11 1221 24555666776 999999998 367899999999999
Q ss_pred Ch
Q 003909 594 RE 595 (787)
Q Consensus 594 ~~ 595 (787)
||
T Consensus 155 K~ 156 (156)
T 1svj_A 155 KG 156 (156)
T ss_dssp CC
T ss_pred CC
Confidence 86
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=3e-06 Score=85.83 Aligned_cols=60 Identities=17% Similarity=0.319 Sum_probs=49.8
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcC----CccCHHHHhhCC-ceEecCCccHHHHhhcCeeccCCCch
Q 003909 672 SHKRMLVEAL-QNQNEVVAMTGD----GVNDAPALKKAD-IGIAMGSGTAVAKSASDMVLADDNFA 731 (787)
Q Consensus 672 ~~K~~~v~~l-~~~~~~v~~vGD----g~ND~~ml~~A~-vgia~~~~~~~~~~~ad~v~~~~~~~ 731 (787)
..|...++.+ .-..+.|++||| +.||++||+.|+ +|++|+|+.+.+|+.||+|+.+++.+
T Consensus 196 vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~~~k~~a~~v~~~~~~~ 261 (262)
T 2fue_A 196 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFPETAHE 261 (262)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCTTC---
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCHHHHHhhheeCCCCcCC
Confidence 4688888877 222578999999 999999999999 59999999999999999999887754
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.94 E-value=4.6e-05 Score=74.33 Aligned_cols=125 Identities=14% Similarity=0.122 Sum_probs=86.5
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|++.|+++.++|+.+...+....+.+|+..+. +.++..++.... ...|
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f----d~~~~~~~~~~~----------------KP~p 143 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF----DVMVFGDQVKNG----------------KPDP 143 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC----SEEECGGGSSSC----------------TTST
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc----cccccccccCCC----------------cccH
Confidence 35789999999999999999999999999999999999987643 122222222111 1234
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE----ecC-CccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI----AMG-SGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi----a~~-~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
+-=..+++.+.-..+.+++|||+.+|+.+-+.||+.. .-| +..+...++.+.++.+ ++.+.+.++
T Consensus 144 ~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~--~~eli~~l~ 213 (216)
T 3kbb_A 144 EIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVK--PEEILNVLK 213 (216)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEEC--GGGHHHHHH
T ss_pred HHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECC--HHHHHHHHH
Confidence 4445666777767788999999999999999999842 223 4455556554444433 344555553
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.93 E-value=4.9e-06 Score=81.01 Aligned_cols=106 Identities=8% Similarity=0.017 Sum_probs=74.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH------hCCCCCccccccccccchhhccCChHHHHHhhccceE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK------IGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMAL 665 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 665 (787)
++.|++.++++.|++ |++++++|+.....+..+.+. .|+.... ..++.......
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f----~~~~~~~~~~~--------------- 148 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF----DKVYASCQMGK--------------- 148 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS----SEEEEHHHHTC---------------
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc----CeEEeecccCC---------------
Confidence 467999999999999 999999999998888777776 5654322 11111111100
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHH
Q 003909 666 FTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAK 718 (787)
Q Consensus 666 ~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~ 718 (787)
....|+--..+++.+.-..+.+++|||+.||+.|.+.||+++++.++.+.++
T Consensus 149 -~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~~~ 200 (211)
T 2i6x_A 149 -YKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGENWI 200 (211)
T ss_dssp -CTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCCH
T ss_pred -CCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 0122333445666666566789999999999999999999999986654433
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.93 E-value=2.5e-05 Score=75.23 Aligned_cols=102 Identities=17% Similarity=0.164 Sum_probs=74.2
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.|++.+.++.|++.| +++++|+.+...+....+.+|+.... ..++....... ....|
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f----~~~~~~~~~~~----------------~Kp~~ 144 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFL----LAFFTSSALGV----------------MKPNP 144 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTC----SCEEEHHHHSC----------------CTTCH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhc----ceEEeecccCC----------------CCCCH
Confidence 36799999999999999 99999999999999999999976432 11121111110 01223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCcc
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGT 714 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~ 714 (787)
+--..+++.+....+.+++|||+.||+.|.+.||+.+++-+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 145 AMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred HHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 3444556666656678999999999999999999998875443
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.90 E-value=7.5e-05 Score=74.79 Aligned_cols=117 Identities=15% Similarity=0.120 Sum_probs=83.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEec--
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRV-- 669 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-- 669 (787)
.+.|++.+.++.|+ .|++++++|+.....+....+.+|+...... +++..
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~---------------------------i~~~~kp 163 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPR---------------------------IEVVSEK 163 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCC---------------------------EEEESCC
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCce---------------------------eeeeCCC
Confidence 46799999999999 9999999999999988888998888653211 22222
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCceEecC-CccH--------HHHhhcCe-eccCCCchHHHHHHH
Q 003909 670 EPSHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIGIAMG-SGTA--------VAKSASDM-VLADDNFATIVAAVA 738 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~vgia~~-~~~~--------~~~~~ad~-v~~~~~~~~i~~~i~ 738 (787)
.|+--..+.+.+.-..+.+++|||+. ||+.|.+.||+++++- .+.. .....+|+ ++. ++..+..+++
T Consensus 164 ~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 241 (251)
T 2pke_A 164 DPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVP--DPSGWPAAVR 241 (251)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECS--SGGGHHHHHH
T ss_pred CHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeC--CHHHHHHHHH
Confidence 23333455666666667899999999 9999999999998753 2211 11235787 664 4667776664
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.80 E-value=2.5e-05 Score=69.98 Aligned_cols=98 Identities=8% Similarity=0.119 Sum_probs=68.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+++++|+++|++++++|+++...+..+.+.+|+..... .++...+... ....|
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~i~~~~~~~~----------------~Kp~~ 77 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVD----KVLLSGELGV----------------EKPEE 77 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSS----EEEEHHHHSC----------------CTTSH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhcc----EEEEeccCCC----------------CCCCH
Confidence 477899999999999999999999999999888888888765321 1111111100 01223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
+--..+.+.+....+.+++|||+.+|+.+.+.+|+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i 115 (137)
T 2pr7_A 78 AAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGV 115 (137)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEE
Confidence 33334455554455678999999999999999998543
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.75 E-value=8.4e-05 Score=75.00 Aligned_cols=123 Identities=14% Similarity=0.135 Sum_probs=85.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|++ +++++++|+.+...+....+.+|+..... .++.+.+...- .-.|
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~----~i~~~~~~~~~----------------KP~p 179 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFD----AIVIGGEQKEE----------------KPAP 179 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCS----EEEEGGGSSSC----------------TTCH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhh----eEEecCCCCCC----------------CCCH
Confidence 578999999999998 59999999999999999999999875431 12222211100 1223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCC-ccCHHHHhhCCc--eEecCCccH---HHHhhcCeeccCCCchHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDG-VNDAPALKKADI--GIAMGSGTA---VAKSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg-~ND~~ml~~A~v--gia~~~~~~---~~~~~ad~v~~~~~~~~i~~~i 737 (787)
+--..+++.+.-..+.+++|||+ .||+.+.+.||+ .|.+.++.. .....+|+++.+ +..+..++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~--~~el~~~l 249 (260)
T 2gfh_A 180 SIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSS--VLELPALL 249 (260)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESS--GGGHHHHH
T ss_pred HHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECC--HHHHHHHH
Confidence 34455566666566789999995 999999999999 677764322 123457888754 55666555
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.74 E-value=1.6e-05 Score=77.94 Aligned_cols=108 Identities=19% Similarity=0.168 Sum_probs=67.4
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCH---------------HHHHHHHHHhCCCCCccccccccccchhhccCChHH
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNK---------------STAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQ 655 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~---------------~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 655 (787)
.++.|++.++|++|+++|++++++|+++. ..+....+++|+..... +.. ..+.. ..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-~~~--~~~~~-g~~~--- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMV-LAC--AYHEA-GVGP--- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEE-EEE--CCCTT-CCST---
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCceeeE-EEe--ecCCC-Ccee---
Confidence 56889999999999999999999999998 67788889998741100 000 00000 0000
Q ss_pred HHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE
Q 003909 656 QTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (787)
Q Consensus 656 ~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi 708 (787)
. .........-.|.-=..+.+.+.-..+.++||||+.||+.|.+.||+..
T Consensus 128 --~-~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 --L-AIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp --T-CCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred --e-cccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 0 0000000001122223445555555678999999999999999999864
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.69 E-value=7.8e-06 Score=79.16 Aligned_cols=108 Identities=14% Similarity=0.113 Sum_probs=69.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH-hCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK-IGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
++.|++.+.++.|+++|++++++|+.+...+..+.+. +|+.... ..++....... ....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f----~~~~~~~~~~~----------------~Kp~ 150 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAA----DHIYLSQDLGM----------------RKPE 150 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHC----SEEEEHHHHTC----------------CTTC
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhhe----eeEEEecccCC----------------CCCC
Confidence 4679999999999999999999999876554333332 3322110 01111111100 0122
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHh
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKS 719 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~ 719 (787)
|+--..+++.+.-..+.+++|||+.||+.|.+.||+..++.+..+..++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~ 199 (206)
T 2b0c_A 151 ARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTIPD 199 (206)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTTHHHH
T ss_pred HHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCchHHH
Confidence 3344556666666667899999999999999999999888765554443
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.62 E-value=8.1e-05 Score=73.21 Aligned_cols=118 Identities=13% Similarity=0.156 Sum_probs=77.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|++. ++++++|+.... .+.+|+.... ..++....... ....|
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f----~~~~~~~~~~~----------------~kp~~ 158 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYF----AFALCAEDLGI----------------GKPDP 158 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGC----SEEEEHHHHTC----------------CTTSH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHe----eeeEEccccCC----------------CCcCH
Confidence 4678999999999999 999999988765 3445554321 11111111100 01223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCceEec---C-CccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIGIAM---G-SGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~vgia~---~-~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
+--..+.+.+.-..+.+++|||+. ||+.|.+.||+++++ + +..+. +..+|+++.+ +..+..+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~~--l~el~~~l~ 227 (230)
T 3vay_A 159 APFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIHN--LSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEESS--GGGHHHHHH
T ss_pred HHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeECC--HHHHHHHHH
Confidence 334555666665677899999997 999999999998887 2 22233 6678998865 777776663
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.59 E-value=5.3e-05 Score=74.75 Aligned_cols=107 Identities=11% Similarity=0.091 Sum_probs=74.0
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH------hCCCCCccccccccccchhhccCChHHHHHhhccceE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK------IGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMAL 665 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 665 (787)
++.|++.++++.|++. ++++++|+.....+..+.+. +|+.... ..++...+...
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~f----d~i~~~~~~~~--------------- 171 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYF----EKTYLSYEMKM--------------- 171 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHC----SEEEEHHHHTC---------------
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhC----CEEEeecccCC---------------
Confidence 3669999999999999 99999999999988876643 3442211 11111111100
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHh
Q 003909 666 FTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKS 719 (787)
Q Consensus 666 ~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~ 719 (787)
....|+--..+++.+.-..+.+++|||+.||+.|.+.||+++++.++.+..++
T Consensus 172 -~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~ 224 (229)
T 4dcc_A 172 -AKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWSH 224 (229)
T ss_dssp -CTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGG
T ss_pred -CCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHH
Confidence 01233444566666666677899999999999999999999998876655544
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00019 Score=72.78 Aligned_cols=43 Identities=9% Similarity=-0.046 Sum_probs=39.1
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHhCCCC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVT---GDNKSTAESICHKIGAFD 633 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~T---Gd~~~~a~~~a~~~gi~~ 633 (787)
.++.+++.+++++|+++|++++++| ||+........+++|+..
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 5678999999999999999999999 999999989999998863
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00032 Score=70.18 Aligned_cols=113 Identities=12% Similarity=0.171 Sum_probs=80.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.+.|+.. .+....+.+|+..+. ..++.+++...-+ ..|
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~F----d~i~~~~~~~~~K----------------P~p 173 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKF----DFIADAGKCKNNK----------------PHP 173 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGC----SEECCGGGCCSCT----------------TSS
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccc----ceeecccccCCCC----------------CcH
Confidence 567899999999999999999988764 356778889987643 2233333222111 234
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCCccHHHHhhcCeeccCC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGSGTAVAKSASDMVLADD 728 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~~~~~~~~~ad~v~~~~ 728 (787)
+-=..+++.+.-..+.+++|||+.+|+.+-+.||+ .|++++..+ .+.||+++.+-
T Consensus 174 ~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~--~~~ad~vi~~l 229 (250)
T 4gib_A 174 EIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYEN--LKKANLVVDST 229 (250)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTT--TTTSSEEESSG
T ss_pred HHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhH--hccCCEEECCh
Confidence 44556677777677889999999999999999998 666764433 23589998653
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0001 Score=74.46 Aligned_cols=41 Identities=10% Similarity=0.063 Sum_probs=37.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHhCCCC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVT---GDNKSTAESICHKIGAFD 633 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~T---Gd~~~~a~~~a~~~gi~~ 633 (787)
.+ |+++++|++++++|++++++| ||+........+++|+..
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 45 899999999999999999999 888888888899999864
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00028 Score=74.72 Aligned_cols=138 Identities=17% Similarity=0.154 Sum_probs=84.0
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
-++.|++.++++.|+++|++++++|+.+...+....+.+|+...... +.++++++...- ........-...-.
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~--~~Ivs~ddv~~~-----~~~~~~~kp~~KP~ 286 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA--DFIATASDVLEA-----ENMYPQARPLGKPN 286 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCG--GGEECHHHHHHH-----HHHSTTSCCCCTTS
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCC--CEEEeccccccc-----ccccccccCCCCCC
Confidence 36889999999999999999999999999999999999998754310 023333322100 00000000000011
Q ss_pred hhhHHHHHHHHh--------------hCCCEEEEEcCCccCHHHHhhCCce-EecCCc------cHHH-HhhcCeeccCC
Q 003909 671 PSHKRMLVEALQ--------------NQNEVVAMTGDGVNDAPALKKADIG-IAMGSG------TAVA-KSASDMVLADD 728 (787)
Q Consensus 671 p~~K~~~v~~l~--------------~~~~~v~~vGDg~ND~~ml~~A~vg-ia~~~~------~~~~-~~~ad~v~~~~ 728 (787)
|+-=....+.+. ...+.+++|||+.+|+.+-++||+. |++..+ .+.. ...||+++.+
T Consensus 287 P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~s- 365 (384)
T 1qyi_A 287 PFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINH- 365 (384)
T ss_dssp THHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESS-
T ss_pred HHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECC-
Confidence 222122222222 2346789999999999999999985 444432 1223 2358998864
Q ss_pred CchHHHHHH
Q 003909 729 NFATIVAAV 737 (787)
Q Consensus 729 ~~~~i~~~i 737 (787)
+..+..++
T Consensus 366 -l~eL~~~l 373 (384)
T 1qyi_A 366 -LGELRGVL 373 (384)
T ss_dssp -GGGHHHHH
T ss_pred -HHHHHHHH
Confidence 66666555
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00071 Score=64.76 Aligned_cols=95 Identities=13% Similarity=0.047 Sum_probs=61.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|+++|+++.++||.....+..+.. ..+ . .++..++... ..-.|
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~-~~~-d-------~v~~~~~~~~----------------~KP~p 90 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA-PVN-D-------WMIAAPRPTA----------------GWPQP 90 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT-TTT-T-------TCEECCCCSS----------------CTTST
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC-ccC-C-------EEEECCcCCC----------------CCCCh
Confidence 577999999999999999999999999887755443 111 1 1111111100 00123
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCc-eEecC
Q 003909 672 SHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADI-GIAMG 711 (787)
Q Consensus 672 ~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A~v-gia~~ 711 (787)
+--....+.+... .+.++||||+.+|+.+-+.||+ +|++.
T Consensus 91 ~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 91 DACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132 (196)
T ss_dssp HHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 3223444444433 3678999999999999999998 45554
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00017 Score=71.25 Aligned_cols=84 Identities=13% Similarity=0.143 Sum_probs=65.5
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHH----HHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEE
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKS----TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~----~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (787)
.++.|++.+.++.|+++|++++++|||+.. .+..-.+++|+..... ..++
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~--------------------------~~Li 153 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND--------------------------KTLL 153 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST--------------------------TTEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc--------------------------ceeE
Confidence 568899999999999999999999999764 7777888999975210 0044
Q ss_pred EecChhhHHHHHHHHhhC-CCEEEEEcCCccCHHH
Q 003909 667 TRVEPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPA 700 (787)
Q Consensus 667 ~~~~p~~K~~~v~~l~~~-~~~v~~vGDg~ND~~m 700 (787)
.+.....|....+.+... -+.|+++||..+|+++
T Consensus 154 lr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 154 LKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp EESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred ecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 443446788888888774 4567899999999987
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0016 Score=65.48 Aligned_cols=42 Identities=10% Similarity=0.046 Sum_probs=37.5
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHhCCCC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVT---GDNKSTAESICHKIGAFD 633 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~T---Gd~~~~a~~~a~~~gi~~ 633 (787)
.+.+.+.++++.+++.|++++++| ||+........+++|+..
T Consensus 32 ~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 32 TAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp EECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 366889999999999999999999 999999999888888753
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00048 Score=68.34 Aligned_cols=38 Identities=11% Similarity=0.166 Sum_probs=32.2
Q ss_pred hhHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHhCCC
Q 003909 595 EEVKNAMLSCMTAGIRVIVVT---GDNKSTAESICHKIGAF 632 (787)
Q Consensus 595 ~~~~~~i~~l~~~gi~v~i~T---Gd~~~~a~~~a~~~gi~ 632 (787)
+.+.++++.+++.|++++++| |++.........++|+.
T Consensus 22 ~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~ 62 (250)
T 2c4n_A 22 PGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 344889999999999999999 89888888877778775
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0002 Score=70.83 Aligned_cols=84 Identities=17% Similarity=0.130 Sum_probs=64.5
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCH----HHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEE
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNK----STAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~----~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (787)
.++.|++.+.++.|+++|++++++|||+. ..+..-.+++|+..... ..++
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~--------------------------~~Li 153 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE--------------------------SAFY 153 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG--------------------------GGEE
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc--------------------------ccee
Confidence 56789999999999999999999999976 47777888899975210 0044
Q ss_pred EecChhhHHHHHHHHhhC-CCEEEEEcCCccCHHH
Q 003909 667 TRVEPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPA 700 (787)
Q Consensus 667 ~~~~p~~K~~~v~~l~~~-~~~v~~vGDg~ND~~m 700 (787)
.+.....|....+.+... -..|++|||..+|+++
T Consensus 154 lr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 154 LKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp EESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred ccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 443345677777777766 4567999999999986
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00014 Score=68.35 Aligned_cols=102 Identities=12% Similarity=0.066 Sum_probs=65.6
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCC---------------CHHHHHHHHHHhCCCCCccccccccccc----hhhccC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGD---------------NKSTAESICHKIGAFDHLVDFVGRSYTA----SEFEEL 651 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd---------------~~~~a~~~a~~~gi~~~~~~~~~~~~~~----~~~~~~ 651 (787)
-++.|++.++|++|+++|++++++|+. ....+..+.+.+|+... ....++ .+...-
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd-----~v~~s~~~~~~~~~~~ 115 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFD-----EVLICPHLPADECDCR 115 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEE-----EEEEECCCGGGCCSSS
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCee-----EEEEcCCCCccccccc
Confidence 357899999999999999999999998 46677888889998611 111110 110000
Q ss_pred ChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EecCCc
Q 003909 652 PAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMGSG 713 (787)
Q Consensus 652 ~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg-ia~~~~ 713 (787)
+ -.|+-=..+++.+.-..+.+++|||+.+|+.+.+.||+. |.+..+
T Consensus 116 K----------------P~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 116 K----------------PKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp T----------------TSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred C----------------CCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 0 011111223344444556789999999999999999995 555544
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0013 Score=65.25 Aligned_cols=110 Identities=12% Similarity=0.147 Sum_probs=76.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|+++|+++.++|+... +..+.+.+|+.... ..++..++...-+ -.|
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~f----d~i~~~~~~~~~K----------------P~p 152 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFF----TFCADASQLKNSK----------------PDP 152 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGC----SEECCGGGCSSCT----------------TST
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccc----ccccccccccCCC----------------CcH
Confidence 4678999999999999999999998754 45677888887543 2223333222111 234
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCCccHHHHhhcCeeccC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGSGTAVAKSASDMVLAD 727 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~~~~~~~~~ad~v~~~ 727 (787)
+-=....+.+.-..+.+++|||+.+|+.+-+.||+ .|++..+. ..+|.++.+
T Consensus 153 ~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~----~~ad~~~~~ 205 (243)
T 4g9b_A 153 EIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGL----TGAQLLLPS 205 (243)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTC----CSCSEEESS
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC----CcHHHhcCC
Confidence 44456667777777889999999999999999998 55665442 235666544
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.00083 Score=65.53 Aligned_cols=94 Identities=10% Similarity=0.083 Sum_probs=62.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|+++|++++++|+... .+....+.+|+.... +.++...+.. .....|
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f----~~~~~~~~~~----------------~~Kp~~ 153 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYF----DALALSYEIK----------------AVKPNP 153 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGC----SEEC---------------------------C
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHe----eEEEeccccC----------------CCCCCH
Confidence 4679999999999999999999999876 478888999986532 1111111110 011222
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCcc-CHHHHhhCCceEe
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVN-DAPALKKADIGIA 709 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~N-D~~ml~~A~vgia 709 (787)
+--..+.+.+.... ++|||+.+ |+.+.+.||+...
T Consensus 154 ~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i 189 (220)
T 2zg6_A 154 KIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPI 189 (220)
T ss_dssp CHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEE
T ss_pred HHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEE
Confidence 23334445444333 89999999 9999999999765
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0036 Score=64.40 Aligned_cols=101 Identities=13% Similarity=0.066 Sum_probs=69.1
Q ss_pred cCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHH---HHHHHH--------hCCCCCccccccccccchhhccCChHHHH
Q 003909 589 MLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTA---ESICHK--------IGAFDHLVDFVGRSYTASEFEELPAMQQT 657 (787)
Q Consensus 589 ~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a---~~~a~~--------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (787)
.+.++.|++.++++.|+++|+++.++||++...+ ....+. +|+... .++..+....
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~------- 251 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLV------MQCQREQGDT------- 251 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCS------EEEECCTTCC-------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCCch------heeeccCCCC-------
Confidence 3567899999999999999999999999986543 444555 787311 1111111100
Q ss_pred HhhccceEEEecChhhHHHHHHHHhhCC-CEEEEEcCCccCHHHHhhCCce-EecCC
Q 003909 658 VALQHMALFTRVEPSHKRMLVEALQNQN-EVVAMTGDGVNDAPALKKADIG-IAMGS 712 (787)
Q Consensus 658 ~~~~~~~v~~~~~p~~K~~~v~~l~~~~-~~v~~vGDg~ND~~ml~~A~vg-ia~~~ 712 (787)
+-.|+-+..+.+.+.... +.+++|||..+|+.|-+.||+- |++..
T Consensus 252 ----------kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~ 298 (301)
T 1ltq_A 252 ----------RKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVAS 298 (301)
T ss_dssp ----------SCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSC
T ss_pred ----------cHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecC
Confidence 123666777777775444 3457899999999999999985 44443
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0013 Score=65.68 Aligned_cols=42 Identities=7% Similarity=0.103 Sum_probs=35.3
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCH---HHHHHHHHHhCCC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNK---STAESICHKIGAF 632 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~---~~a~~~a~~~gi~ 632 (787)
.++.|++.++|+.|+++|++++++||++. ..+....+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 45779999999999999999999999994 4455566778886
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0029 Score=62.19 Aligned_cols=114 Identities=13% Similarity=0.169 Sum_probs=74.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|+++| +++++|+.+...+....+.+|+...... . +...
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~~---~-----------------------~~~~--- 145 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEG---R-----------------------VLIY--- 145 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTTT---C-----------------------EEEE---
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcCe---e-----------------------EEec---
Confidence 57899999999999999 9999999999999999999987542210 0 1111
Q ss_pred hhHHHHHHHH--hhCCCEEEEEcCCcc---CHHHHhhCCce-EecCCc-----cHHHHhh--cCeeccCCCchHHHHHH
Q 003909 672 SHKRMLVEAL--QNQNEVVAMTGDGVN---DAPALKKADIG-IAMGSG-----TAVAKSA--SDMVLADDNFATIVAAV 737 (787)
Q Consensus 672 ~~K~~~v~~l--~~~~~~v~~vGDg~N---D~~ml~~A~vg-ia~~~~-----~~~~~~~--ad~v~~~~~~~~i~~~i 737 (787)
..|...++.+ .-..+.+++|||+.+ |+.+-+.||+. |.+..+ .+..++. +|+++.+ +..+..++
T Consensus 146 ~~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~--~~el~~~l 222 (231)
T 2p11_A 146 IHKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVER--IGDLVEMD 222 (231)
T ss_dssp SSGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESS--GGGGGGCG
T ss_pred CChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecC--HHHHHHHH
Confidence 1111222222 235678999999999 66666788874 334322 2344443 8888854 44444433
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0064 Score=61.01 Aligned_cols=115 Identities=12% Similarity=0.186 Sum_probs=77.7
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHh---CCCCCccccccccccchhhccCChHHHHHhhccceEEE
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI---GAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
-++.|++.++++.|+++|+++.++|+.+...+..+.+.+ |+.... ..++.. +.. .
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~f----d~i~~~-~~~-----------------~ 186 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV----DGHFDT-KIG-----------------H 186 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC----SEEECG-GGC-----------------C
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhc----cEEEec-CCC-----------------C
Confidence 368899999999999999999999999998888777744 454432 112222 111 1
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EecCC-c--c-HHHHhhcCeeccC
Q 003909 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMGS-G--T-AVAKSASDMVLAD 727 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg-ia~~~-~--~-~~~~~~ad~v~~~ 727 (787)
.-.|+-=..+.+.+.-..+.+++|||+.+|+.+-+.||+- |.+.. + . +.....+|+++.+
T Consensus 187 KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~ 251 (261)
T 1yns_A 187 KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 251 (261)
T ss_dssp TTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred CCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECC
Confidence 1223433556666666677899999999999999999985 44432 1 1 2223456777654
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0086 Score=59.72 Aligned_cols=44 Identities=16% Similarity=0.040 Sum_probs=33.6
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHhCCCC
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVT---GDNKSTAESICHKIGAFD 633 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~T---Gd~~~~a~~~a~~~gi~~ 633 (787)
.++.-+++.++++.++++|++++++| |+.........+++|+..
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 45566789999999999999999999 666666666667777754
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0052 Score=63.44 Aligned_cols=121 Identities=15% Similarity=0.065 Sum_probs=70.4
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHh----CCCCCcccccccccc-chhhccCCh-HHHHHh----
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI----GAFDHLVDFVGRSYT-ASEFEELPA-MQQTVA---- 659 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~----gi~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~---- 659 (787)
...+.|++++.++.|+++|++|+|+||-....++.+|..+ ||....+-.....+. +........ .+....
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~ 220 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDP 220 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCG
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeeeeeeeccccccccccccccccccccc
Confidence 3457899999999999999999999999999999999984 555432110000000 000000000 000000
Q ss_pred --hccceEEEe-----cChhhHHHHHHHHhhC-CCEEEEEcCC-ccCHHHHhh--CCceEec
Q 003909 660 --LQHMALFTR-----VEPSHKRMLVEALQNQ-NEVVAMTGDG-VNDAPALKK--ADIGIAM 710 (787)
Q Consensus 660 --~~~~~v~~~-----~~p~~K~~~v~~l~~~-~~~v~~vGDg-~ND~~ml~~--A~vgia~ 710 (787)
.....+-.+ +.-+.|...++..... ...++++||+ ..|.+||+. ++.|+.+
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L 282 (327)
T 4as2_A 221 KANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHL 282 (327)
T ss_dssp GGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEE
T ss_pred cccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEE
Confidence 000001111 2235788888776543 3567889999 579999965 4444443
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0036 Score=64.57 Aligned_cols=43 Identities=9% Similarity=0.033 Sum_probs=37.3
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHhCCC
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVT---GDNKSTAESICHKIGAF 632 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~T---Gd~~~~a~~~a~~~gi~ 632 (787)
.+++-+++.+++++|+++|++++++| |++........+++|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45677899999999999999999999 68888877778888886
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.062 Score=50.22 Aligned_cols=16 Identities=13% Similarity=0.054 Sum_probs=14.4
Q ss_pred CccccCceEEEEEEEe
Q 003909 350 GTLTTNMMSVAKICVV 365 (787)
Q Consensus 350 GTLT~~~~~v~~i~~~ 365 (787)
||||+|+|.|..+...
T Consensus 1 GTLT~G~p~V~~v~~~ 16 (185)
T 2kmv_A 1 SFTMHGTPVVNQVKVL 16 (185)
T ss_dssp CCCCSCCCEEEEEEEC
T ss_pred CCCcCCcEEEEEEEec
Confidence 8999999999998754
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=95.48 E-value=0.011 Score=52.48 Aligned_cols=42 Identities=12% Similarity=-0.042 Sum_probs=36.0
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCC---HHHHHHHHHHhCCCCC
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDN---KSTAESICHKIGAFDH 634 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~---~~~a~~~a~~~gi~~~ 634 (787)
+.|++.++|++|+++|++++++|||+ ...+...+++.|+...
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~ 69 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFY 69 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCS
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeE
Confidence 45799999999999999999999998 5667777888888654
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.012 Score=65.82 Aligned_cols=98 Identities=11% Similarity=0.119 Sum_probs=64.5
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCC------CHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGD------NKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMAL 665 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd------~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 665 (787)
++.|++.++++.|+++|++++++|+. .......... |+..+. +.++.+++...-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l~~~f----d~i~~~~~~~~~-------------- 159 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--ELKMHF----DFLIESCQVGMV-------------- 159 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HHHTTS----SEEEEHHHHTCC--------------
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hhhhhe----eEEEeccccCCC--------------
Confidence 57899999999999999999999996 2222222211 332221 122222222111
Q ss_pred EEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecC
Q 003909 666 FTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG 711 (787)
Q Consensus 666 ~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~ 711 (787)
.-.|+--..+.+.+.-..+.+++|||+.||+.+.+.||+....-
T Consensus 160 --KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 160 --KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp --TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred --CCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 12344445566666666778999999999999999999977654
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=95.28 E-value=0.0082 Score=60.23 Aligned_cols=43 Identities=12% Similarity=0.189 Sum_probs=35.5
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH----hCCCC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK----IGAFD 633 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~----~gi~~ 633 (787)
++.-+++.++++.+++.|++++++||+.......+++. +|+..
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~ 66 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 66 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCC
Confidence 44458899999999999999999999998877776665 77753
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=95.18 E-value=0.0049 Score=59.58 Aligned_cols=90 Identities=19% Similarity=0.259 Sum_probs=56.5
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHH----hCCCCCccccccccccchhhccCChHHHHHhhccceEEE-
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK----IGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT- 667 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~- 667 (787)
+.+++.++++.|+++|++++++|+++...+..+.+. ++... .+... ..+.
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~----------~~~~~---------------~~~~~ 143 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA----------TNMNP---------------VIFAG 143 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT----------TTBCC---------------CEECC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc----------cccch---------------hhhcC
Confidence 467899999999999999999999986544443333 22210 00000 0011
Q ss_pred -ecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EecC
Q 003909 668 -RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMG 711 (787)
Q Consensus 668 -~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg-ia~~ 711 (787)
...|+-...+++. .+- +++|||+.+|+.+.+.||+. |.+.
T Consensus 144 ~KP~p~~~~~~~~~---~g~-~l~VGDs~~Di~aA~~aG~~~i~v~ 185 (211)
T 2b82_A 144 DKPGQNTKSQWLQD---KNI-RIFYGDSDNDITAARDVGARGIRIL 185 (211)
T ss_dssp CCTTCCCSHHHHHH---TTE-EEEEESSHHHHHHHHHTTCEEEECC
T ss_pred CCCCHHHHHHHHHH---CCC-EEEEECCHHHHHHHHHCCCeEEEEe
Confidence 1123333344433 343 89999999999999999985 4454
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=94.28 E-value=0.032 Score=59.97 Aligned_cols=95 Identities=15% Similarity=0.133 Sum_probs=61.0
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCC------------HHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhh
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDN------------KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~------------~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (787)
+-|++.++|+.|+++|++++++|+.+ ...+..+.+.+|+.... ++...+...
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~fd~------i~~~~~~~~---------- 151 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVPFQV------LVATHAGLN---------- 151 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSCCEE------EEECSSSTT----------
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCCEEE------EEECCCCCC----------
Confidence 67999999999999999999999966 22367788889984211 111110000
Q ss_pred ccceEEEecChhhHHHHHHHHh----hCCCEEEEEcCCc-----------------cCHHHHhhCCceEe
Q 003909 661 QHMALFTRVEPSHKRMLVEALQ----NQNEVVAMTGDGV-----------------NDAPALKKADIGIA 709 (787)
Q Consensus 661 ~~~~v~~~~~p~~K~~~v~~l~----~~~~~v~~vGDg~-----------------ND~~ml~~A~vgia 709 (787)
..-.|.-=..+++.+. -..+.++||||+. +|+.+-+.||+-..
T Consensus 152 ------~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~ 215 (416)
T 3zvl_A 152 ------RKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 215 (416)
T ss_dssp ------STTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEE
T ss_pred ------CCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCccc
Confidence 0011222233344443 2346789999997 68888888888753
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=93.97 E-value=0.0015 Score=62.28 Aligned_cols=81 Identities=14% Similarity=0.080 Sum_probs=59.6
Q ss_pred CCCChhHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEec
Q 003909 591 DPPREEVKNAMLSCMTA-GIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRV 669 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~-gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 669 (787)
-++.|++.+++++|+++ |++++++|+.+...+..+.+.+|+ .. .++
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl-f~------~i~-------------------------- 118 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW-VE------QHL-------------------------- 118 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH-HH------HHH--------------------------
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc-hh------hhc--------------------------
Confidence 35789999999999999 999999999998888888888876 10 000
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccC----HHHHh-hCCceE
Q 003909 670 EPSHKRMLVEALQNQNEVVAMTGDGVND----APALK-KADIGI 708 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~vGDg~ND----~~ml~-~A~vgi 708 (787)
.+ ..++.+....+.+++|||+.+| +.+-+ .||+..
T Consensus 119 ~~----~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~ 158 (193)
T 2i7d_A 119 GP----QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEH 158 (193)
T ss_dssp CH----HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCSSEE
T ss_pred CH----HHHHHcCCCcccEEEECCchhhCcHHHhhcccccccce
Confidence 01 1333334446678899999999 77766 777644
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=92.98 E-value=0.13 Score=51.00 Aligned_cols=95 Identities=8% Similarity=0.060 Sum_probs=64.5
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHh--C---------CCCCccccccccccchhhccCChHHHHHh
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI--G---------AFDHLVDFVGRSYTASEFEELPAMQQTVA 659 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~--g---------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (787)
-++.|++.+++++ |+++.++|+.+...+..+.+.+ | +...... .+.. ...
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~----~f~~-~~~---------- 184 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDG----YFDI-NTS---------- 184 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCE----EECH-HHH----------
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcce----EEee-ecc----------
Confidence 3578999999988 9999999999999888887766 4 2211100 0000 000
Q ss_pred hccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-ec
Q 003909 660 LQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AM 710 (787)
Q Consensus 660 ~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi-a~ 710 (787)
-..-.|+-=..+.+.+.-..+.+++|||+.+|+.+-+.||+-. .+
T Consensus 185 ------g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v 230 (253)
T 2g80_A 185 ------GKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLA 230 (253)
T ss_dssp ------CCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEE
T ss_pred ------CCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 0012344445566667666778999999999999999999854 44
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=90.89 E-value=0.0047 Score=59.00 Aligned_cols=82 Identities=11% Similarity=0.065 Sum_probs=58.3
Q ss_pred CCChhHHHHHHHHHhC-CCEEEEEcCCCHHHHHHHHHHhCCCC-CccccccccccchhhccCChHHHHHhhccceEEEec
Q 003909 592 PPREEVKNAMLSCMTA-GIRVIVVTGDNKSTAESICHKIGAFD-HLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRV 669 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~-gi~v~i~TGd~~~~a~~~a~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 669 (787)
++.|++.++++.|+++ |+++.++|+.+...+....+.+|+.. +.
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f---------------------------------- 120 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYF---------------------------------- 120 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHH----------------------------------
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhc----------------------------------
Confidence 5789999999999999 99999999999887777777776643 11
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccC----HHHHh-hCCce-EecC
Q 003909 670 EPSHKRMLVEALQNQNEVVAMTGDGVND----APALK-KADIG-IAMG 711 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~~~~v~~vGDg~ND----~~ml~-~A~vg-ia~~ 711 (787)
+ ....+.+.-..+.++++||+.+| +.+-+ .||+- |.+.
T Consensus 121 -~---~~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~ 164 (197)
T 1q92_A 121 -G---PDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFT 164 (197)
T ss_dssp -C---GGGGGGEEECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEEC
T ss_pred -h---HHHHHHhccCCccEEEECcccccCCchhhhcccCCCceEEEec
Confidence 0 11112222234567888999998 77776 77774 4444
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=89.69 E-value=0.068 Score=54.54 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=27.5
Q ss_pred hhhcccccccccccccc---------CCeeEEEeCCCCccccCce
Q 003909 322 MARLNAIVRSLPSVETL---------GCTTVICSDKTGTLTTNMM 357 (787)
Q Consensus 322 l~~~~i~~k~~~~le~l---------g~v~~i~~DKTGTLT~~~~ 357 (787)
+.|.++++|++..+|++ .++. |+||||||||+...
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 47889999999998873 2343 67899999998643
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=89.40 E-value=0.67 Score=42.82 Aligned_cols=25 Identities=4% Similarity=0.012 Sum_probs=23.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGD 617 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd 617 (787)
++.|++.+.++.|++. +++.++|+.
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~ 93 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAA 93 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCC
Confidence 5789999999999985 999999998
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.97 E-value=0.066 Score=50.66 Aligned_cols=91 Identities=9% Similarity=0.074 Sum_probs=63.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+||++.+.+++|++. ++++++|......|..+.+.+++.... ...+..++..
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f----~~~l~rd~~~---------------------- 120 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVF----RARLFRESCV---------------------- 120 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCE----EEEECGGGCE----------------------
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccE----EEEEEcccce----------------------
Confidence 5789999999999998 999999999999999999999987532 1112222111
Q ss_pred hhHHHHHH---HHhhCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 672 SHKRMLVE---ALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 672 ~~K~~~v~---~l~~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
..|...++ .+....+.|++|+|+.+++.+-..|++-|.
T Consensus 121 ~~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 121 FHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQ 161 (195)
T ss_dssp EETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECC
T ss_pred ecCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEe
Confidence 01111111 223345678999999999988777776654
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=87.67 E-value=2.3 Score=42.01 Aligned_cols=109 Identities=21% Similarity=0.214 Sum_probs=63.3
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHH---------HHH----HHHhCCCCCccccccccccchhhccCChHHHH
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTA---------ESI----CHKIGAFDHLVDFVGRSYTASEFEELPAMQQT 657 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a---------~~~----a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (787)
..+.+++.++++.|+ +|+++ ++|....... ..+ ..-++-..
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~------------------------ 182 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEP------------------------ 182 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCC------------------------
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCc------------------------
Confidence 457899999999999 89998 8887654321 001 11111110
Q ss_pred HhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCce-EecCCc---cHHHHh---hcCeeccCCC
Q 003909 658 VALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIG-IAMGSG---TAVAKS---ASDMVLADDN 729 (787)
Q Consensus 658 ~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~vg-ia~~~~---~~~~~~---~ad~v~~~~~ 729 (787)
.....-.|.-=..+++. -..+.++||||+. +|+.+-+.||+. |.+..+ .+...+ .+|+++.+
T Consensus 183 ------~~~~KP~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~-- 252 (263)
T 1zjj_A 183 ------IIIGKPNEPMYEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPS-- 252 (263)
T ss_dssp ------EECSTTSHHHHHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESS--
T ss_pred ------cEecCCCHHHHHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECC--
Confidence 01111122222233333 4577899999995 999999999985 555432 233332 47888754
Q ss_pred chHHHH
Q 003909 730 FATIVA 735 (787)
Q Consensus 730 ~~~i~~ 735 (787)
+..+..
T Consensus 253 l~el~~ 258 (263)
T 1zjj_A 253 VYELID 258 (263)
T ss_dssp GGGGGG
T ss_pred HHHHHH
Confidence 444443
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=87.06 E-value=0.94 Score=39.13 Aligned_cols=30 Identities=23% Similarity=0.372 Sum_probs=27.0
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKST 621 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~ 621 (787)
.+.+++.+++++|+++|++++++|||+...
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMRT 53 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence 567899999999999999999999998743
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=86.92 E-value=6.1 Score=35.77 Aligned_cols=15 Identities=13% Similarity=0.102 Sum_probs=13.0
Q ss_pred cChhHHHHHHHHHHc
Q 003909 435 GEATEVALRVLAEKV 449 (787)
Q Consensus 435 ~~~~~~al~~~~~~~ 449 (787)
.||...|++++++..
T Consensus 37 eHPlA~AIv~~a~~~ 51 (165)
T 2arf_A 37 EHPLGVAVTKYCKEE 51 (165)
T ss_dssp CSTTHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHh
Confidence 599999999998765
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=86.32 E-value=0.6 Score=48.55 Aligned_cols=48 Identities=17% Similarity=0.109 Sum_probs=36.7
Q ss_pred EeccCCCCChhHHHHHHHHHhCCCEEEEEcCCC----HHHHHHHHHHhCCCC
Q 003909 586 LVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDN----KSTAESICHKIGAFD 633 (787)
Q Consensus 586 ~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~----~~~a~~~a~~~gi~~ 633 (787)
++.-.+.+-|++.++++.|+++|++++++|+.+ ...+..+.+.+|+..
T Consensus 23 vl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~ 74 (352)
T 3kc2_A 23 VLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDV 74 (352)
T ss_dssp TTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCC
T ss_pred eeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCC
Confidence 334456677999999999999999999999875 334555666789864
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=85.85 E-value=0.31 Score=45.40 Aligned_cols=91 Identities=10% Similarity=0.072 Sum_probs=63.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+||++.+.++++++. ++++++|......|..+.+.++..... ...+..+....
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f----~~~~~rd~~~~--------------------- 108 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAF----RARLFRESCVF--------------------- 108 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCE----EEEECGGGSEE---------------------
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcE----EEEEeccCcee---------------------
Confidence 5799999999999998 999999999999999999999986532 11111111100
Q ss_pred hhHHHHH---HHHhhCCCEEEEEcCCccCHHHHhhCCceEe
Q 003909 672 SHKRMLV---EALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (787)
Q Consensus 672 ~~K~~~v---~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia 709 (787)
.|...+ +.+....+.|++|||+.+|..+-..+++-|.
T Consensus 109 -~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~ 148 (181)
T 2ght_A 109 -HRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVA 148 (181)
T ss_dssp -ETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCCC
T ss_pred -cCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEec
Confidence 011111 1223345678999999999988777776653
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=81.46 E-value=1.3 Score=43.81 Aligned_cols=35 Identities=14% Similarity=0.112 Sum_probs=30.0
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHH
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESI 625 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~ 625 (787)
+..+.+.++++|++|+++ ++++++|||+...+...
T Consensus 28 ~~~is~~~~~al~~l~~~-i~v~iaTGR~~~~~~~~ 62 (262)
T 2fue_A 28 RQKIDPEVAAFLQKLRSR-VQIGVVGGSDYCKIAEQ 62 (262)
T ss_dssp TSCCCHHHHHHHHHHTTT-SEEEEECSSCHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHhC-CEEEEEcCCCHHHHHHH
Confidence 346899999999999999 99999999998765543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 787 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 4e-51 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 6e-41 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 8e-37 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 3e-33 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-30 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 3e-29 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 3e-05 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 7e-25 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 9e-25 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 4e-18 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 6e-10 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-08 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 5e-08 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 5e-07 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 2e-06 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 2e-06 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 2e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-06 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 1e-05 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 2e-05 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 2e-05 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 8e-05 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 0.004 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 177 bits (448), Expect = 4e-51
Identities = 99/248 (39%), Positives = 132/248 (53%), Gaps = 24/248 (9%)
Query: 357 MSVAKICVVHSVQQGPI-IAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSA 415
MSV K+ ++ V + E+ +TG+TYAPEG V + + Q L+ +A A
Sbjct: 1 MSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKND--KPIRSGQFDGLVELATICA 58
Query: 416 LCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475
LCN+S L +N KG YEK+GEATE AL L EK+ + + LSK ERA+ CN
Sbjct: 59 LCNDSSLDFNETKGVYEKVGEATETALTTLVEKMN-----VFNTEVRNLSKVERANACNS 113
Query: 476 HWEIEFKKVSILEFSRDRKMMSVLCSHKQ------MCVMFSKGAPESVLSRCTNILCNDN 529
KK LEFSRDRK MSV CS + MF KGAPE V+ RC +
Sbjct: 114 VIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTT 173
Query: 530 GFIVPMTANIRAELESRLNSLA-GKEALRCLALALKQMPINRQTLSYDD-------EKDL 581
VPMT ++ ++ S + G++ LRCLALA + P R+ + DD E DL
Sbjct: 174 --RVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDL 231
Query: 582 TFIGLVGM 589
TF+G+VGM
Sbjct: 232 TFVGVVGM 239
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 145 bits (367), Expect = 6e-41
Identities = 97/161 (60%), Positives = 118/161 (73%)
Query: 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFV 639
D T LDPPR+EV ++ C AGIRVI++TGDNK TA +IC +IG F +
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA 67
Query: 640 GRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAP 699
R+YT EF++LP +Q A + F RVEPSHK +VE LQ+ +E+ AMTGDGVNDAP
Sbjct: 68 DRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAP 127
Query: 700 ALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEG 740
ALKKA+IGIAMGSGTAVAK+AS+MVLADDNF+TIVAAV EG
Sbjct: 128 ALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 140 bits (353), Expect = 8e-37
Identities = 45/418 (10%), Positives = 90/418 (21%), Gaps = 96/418 (22%)
Query: 328 IVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPE 387
+ L LG + I + +
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRN---------------------------- 57
Query: 388 GVVFDSSGIQLEFPAQ-LPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLA 446
+F I + + L + + +K+ A
Sbjct: 58 -RIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLI--------DILKKLSHDEIEAFMYQD 108
Query: 447 EKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMC 506
E V L + L + + + K
Sbjct: 109 EPVELKL---------------------QNISTNLADCFNLNEQLPLQFLDNVKVGKNNI 147
Query: 507 VMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQM 566
+ + L ++ L+ L +LA +E + L K
Sbjct: 148 YAALEEFATTEL---------------HVSDATLFSLKGALWTLA-QEVYQEWYLGSKLY 191
Query: 567 PINRQTLSYDDEKDLTFIGLVGMLDP--PREEVKNAMLSCMTAGIRVIVVTGDNKSTAES 624
+ G + P +EVK + AG + + TG +
Sbjct: 192 EDVE----KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVV 247
Query: 625 ICHKIGA---FDHLVDFVGRSYTASEFEELPAMQQ----TVALQHMALFTRVEPSHKRML 677
+G F+ +E A + + +
Sbjct: 248 PFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYIN 307
Query: 678 VEALQNQNEVVAMTGDGVNDAPALKKAD---IGIAMGSGTA-----VAKSASDMVLAD 727
+ + V + GD + D + +K IG G + +D V+
Sbjct: 308 KQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINH 365
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 124 bits (313), Expect = 3e-33
Identities = 47/254 (18%), Positives = 84/254 (33%), Gaps = 56/254 (22%)
Query: 356 MMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSA 415
MM+VA + + + + T F + P ++R +
Sbjct: 1 MMTVAHMWFDNQI--------HEADTTEDQSGA----------TFDKRSPTWTALSRIAG 42
Query: 416 LCNESVLQYNPDKGNYEK---IGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASY 472
LCN +V + + + K G+A+E AL E
Sbjct: 43 LCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG--------------------- 81
Query: 473 CNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMC---VMFSKGAPESVLSRCTNILCNDN 529
KV+ + F+ K + + V+ KGAPE +L RC++IL
Sbjct: 82 SVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSIL--VQ 139
Query: 530 GFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDD--------EKDL 581
G +P+ ++ ++ L G R L +P + + + L
Sbjct: 140 GKEIPLDKEMQDAFQNAYLELGGL-GERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKL 198
Query: 582 TFIGLVGMLDPPRE 595
F+GL+ M+D
Sbjct: 199 CFVGLMSMIDHHHH 212
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 123 bits (310), Expect = 2e-30
Identities = 69/138 (50%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Query: 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDL 60
ME A+++S E L +FGV T GLT QV RH+ YG N LP E+ + W+LV++QF+DL
Sbjct: 1 MEAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDL 60
Query: 61 LVKILIAAAVISFFLALI-NGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELR 119
LV+IL+ AA ISF LA GE +TAF+EP VILLIL ANA VGV E NAE A+E L+
Sbjct: 61 LVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 120 AYQADIATVLRNGCFSIL 137
Y+ + L
Sbjct: 121 EYEPAATEQDKTPLQQKL 138
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 120 bits (301), Expect = 3e-29
Identities = 82/132 (62%), Positives = 101/132 (76%), Gaps = 3/132 (2%)
Query: 236 MLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKI 294
TE + TPL++KLDEFG L+KVI+ ICV VW++NIGHF DP HGG ++RGAI+YFKI
Sbjct: 124 PAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKI 183
Query: 295 AVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDK--TGTL 352
AVALAVAAIPEGLPAV+TTCLALGT+RMA+ NAIVRSLPSVETLG + +
Sbjct: 184 AVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLI 243
Query: 353 TTNMMSVAKICV 364
++N+ V I +
Sbjct: 244 SSNVGEVVCIFL 255
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 45.0 bits (106), Expect = 3e-05
Identities = 37/74 (50%), Positives = 49/74 (66%)
Query: 714 TAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGI 773
T +A M + ++ + GRAIYNN KQFIRY+ISSN+GEVVCIF+ A LG+
Sbjct: 202 TCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGL 261
Query: 774 PDTLAPVSLISVNI 787
P+ L PV L+ VN+
Sbjct: 262 PEALIPVQLLWVNL 275
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 98.6 bits (245), Expect = 7e-25
Identities = 54/158 (34%), Positives = 75/158 (47%), Gaps = 32/158 (20%)
Query: 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFV 639
D T G D +E K A+ GI+V ++TGDN +AE+I +
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRE----------- 57
Query: 640 GRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAP 699
L + V P K V+ LQ + EVVA GDG+NDAP
Sbjct: 58 --------------------LNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAP 96
Query: 700 ALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAV 737
AL +AD+GIA+GSG+ VA + D+VL D+ +VAA+
Sbjct: 97 ALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 97.5 bits (242), Expect = 9e-25
Identities = 56/115 (48%), Positives = 76/115 (66%), Gaps = 2/115 (1%)
Query: 124 DIATVLRNGCFSI--LPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGES 181
++ V R S+ + A ++VPGDIVEV VG K+PAD+R++ + S LRVDQ+ILTGES
Sbjct: 1 EMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGES 60
Query: 182 CSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSM 236
SV K + + AV QDK N+LFSGT + AG+A +V G +T +G IRD M
Sbjct: 61 VSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 82.0 bits (201), Expect = 4e-18
Identities = 22/157 (14%), Positives = 44/157 (28%), Gaps = 7/157 (4%)
Query: 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEEL 651
RE + + I V++G + I D + +
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASF-------DN 127
Query: 652 PAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG 711
+ + K ++ L N+ + M GD V D A K +D+ A
Sbjct: 128 DYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD 187
Query: 712 SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTK 748
+ + L +F I + + + +
Sbjct: 188 YLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQ 224
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 57.6 bits (138), Expect = 6e-10
Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 1/79 (1%)
Query: 661 QHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 720
+ + + KR V A ++ V GD ND L +A GI + V +
Sbjct: 121 DRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREF 180
Query: 721 SDMVLADDNFATIVAAVAE 739
+ + +
Sbjct: 181 PQFPAV-HTYEDLKREFLK 198
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.8 bits (128), Expect = 1e-08
Identities = 22/143 (15%), Positives = 42/143 (29%), Gaps = 14/143 (9%)
Query: 589 MLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEF 648
++ + ++V +++G +S E + K+ V
Sbjct: 79 QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNV----------FA 128
Query: 649 EELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQN--EVVAMTGDGVNDAPALKKADI 706
L E K +++ L+ + + + M GDG D A AD
Sbjct: 129 NRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADA 188
Query: 707 GIAMGSGTAV--AKSASDMVLAD 727
I G K + + D
Sbjct: 189 FIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 52.3 bits (124), Expect = 5e-08
Identities = 30/218 (13%), Positives = 60/218 (27%), Gaps = 11/218 (5%)
Query: 525 LCNDNGFIVPMTANIRAELESRLNSLA---GKEALRCLALALKQMPINRQTLSYDDEKDL 581
+ N I ES + G A + + + ++ D
Sbjct: 13 ITYPNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAAS-ILIGTSGPVVAEDGGAIS 71
Query: 582 TFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGR 641
+ + E + + R D ++ I + + + + +
Sbjct: 72 YKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRA-GLVIMRETINVETVREII-- 128
Query: 642 SYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPAL 701
+E + H+ + S E L + + VA GDG ND A
Sbjct: 129 ----NELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAF 184
Query: 702 KKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739
K +A+ + K +D V + A+
Sbjct: 185 KVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYH 222
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 50.0 bits (118), Expect = 5e-07
Identities = 17/69 (24%), Positives = 28/69 (40%)
Query: 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNF 730
+ L++ N+ V + GD ND L A+ + T AKS + VL +
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHR 268
Query: 731 ATIVAAVAE 739
VA + +
Sbjct: 269 EGAVAYLLK 277
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 47.5 bits (111), Expect = 2e-06
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 1/84 (1%)
Query: 654 MQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSG 713
+ T ++ L + + + E GDG ND KKA + IA
Sbjct: 127 GKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-A 185
Query: 714 TAVAKSASDMVLADDNFATIVAAV 737
+ K +D+ + + I+ +
Sbjct: 186 KPILKEKADICIEKRDLREILKYI 209
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 47.6 bits (112), Expect = 2e-06
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFA 731
+ L++ + V GD NDA LK A AMG+ K + D+N
Sbjct: 193 NGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHE 252
Query: 732 TIVAAVAEGRAIYNNTKQF 750
+ + +A+ +NT F
Sbjct: 253 GALNVI---QAVLDNTYPF 268
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 46.2 bits (109), Expect = 2e-06
Identities = 21/124 (16%), Positives = 35/124 (28%), Gaps = 4/124 (3%)
Query: 604 CMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHM 663
+T G + + ++ L+D + S + ++ L
Sbjct: 15 VLTDGQ--LHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK 72
Query: 664 ALFTRVEPSHK--RMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSAS 721
F L++ E A GD D PA A+ K+A
Sbjct: 73 LFFLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAV 132
Query: 722 DMVL 725
D VL
Sbjct: 133 DHVL 136
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 46.9 bits (110), Expect = 3e-06
Identities = 21/199 (10%), Positives = 45/199 (22%), Gaps = 54/199 (27%)
Query: 595 EEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY----------- 643
+ ++ S G+ V +++G+ ++ +G + G
Sbjct: 23 TKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFF 82
Query: 644 ----------TASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEV------ 687
S+ + ++ + F + EA +
Sbjct: 83 SNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYS 142
Query: 688 ---------------------------VAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 720
+ + GD ND P + + T K+
Sbjct: 143 WHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAV 202
Query: 721 SDMVLADDNFATIVAAVAE 739
SD V I
Sbjct: 203 SDFVSDYSYGEEIGQIFKH 221
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 45.3 bits (106), Expect = 1e-05
Identities = 11/54 (20%), Positives = 24/54 (44%)
Query: 686 EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739
E + GD ND ++ A +G+A+ + K ++ V + + A+ +
Sbjct: 214 EEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEK 267
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 45.3 bits (106), Expect = 2e-05
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 674 KRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDN 729
KR+ + E A+ GD +ND L+ A G+AMG+ KS +D V ++
Sbjct: 219 KRLAKQLNIPLEETAAV-GDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTND 273
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 44.5 bits (104), Expect = 2e-05
Identities = 20/65 (30%), Positives = 29/65 (44%)
Query: 675 RMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIV 734
++ + E GDG ND L+ A IG+AMG K+A+D V A + I
Sbjct: 192 DEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGIS 251
Query: 735 AAVAE 739
A+
Sbjct: 252 KAMKH 256
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 42.7 bits (99), Expect = 8e-05
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 674 KRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDN 729
+ + + E+V GD ND ++A + +AM + K ASD+V +N
Sbjct: 196 RFLRERMNWKKEEIVVF-GDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNN 250
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 37.3 bits (85), Expect = 0.004
Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 683 NQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMV 724
Q E A+ GD ND P + D +GS +
Sbjct: 195 GQIESYAV-GDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSI 235
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 787 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.96 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.94 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.94 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.93 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.89 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.87 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.82 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.54 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.53 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.52 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.51 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.48 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.41 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.38 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.36 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.35 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.23 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.18 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.13 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.12 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.06 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.01 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.99 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.62 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.55 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.06 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.99 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.99 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.88 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.88 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.83 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.62 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.53 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.52 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 97.43 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.21 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 97.2 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 97.16 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 97.15 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.1 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 97.02 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 96.88 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.85 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 96.65 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 96.64 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 96.53 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 96.47 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 96.44 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 96.32 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 96.3 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 96.29 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 96.15 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 96.05 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 96.04 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 95.97 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 95.5 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 95.28 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 94.12 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 82.8 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.96 E-value=9.2e-30 Score=235.55 Aligned_cols=150 Identities=63% Similarity=0.943 Sum_probs=143.4
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
||+|++++++|+.|+++||+++|+|||+..+|..+|+++||...........+.+.+++.....+..+...+..+|+|++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 99999999999999999999999999999999999999999877666666778889999999888888889999999999
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHH
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEG 740 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~g 740 (787)
|++|..+++.+++.|++|+|+|||.||++||+.||+||+|+++++.++++||+++.++++..|.++|++|
T Consensus 99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEeccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.94 E-value=3.5e-27 Score=258.79 Aligned_cols=246 Identities=57% Similarity=0.861 Sum_probs=198.2
Q ss_pred CcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhc-
Q 003909 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALIN- 79 (787)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~GLs~~~~~~~~~~~g~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (787)
||+||..|++|++++|++|+++|||++||++|+++||+|+++.++++++|+.++++|+++++++++++++++++.+.+.
T Consensus 1 m~~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~ 80 (472)
T d1wpga4 1 MEAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEE 80 (472)
T ss_dssp CTTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSC
T ss_pred CcChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999888764
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCeEEEeecCCCCCCcEEEecCCCccccc
Q 003909 80 GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPAD 159 (787)
Q Consensus 80 ~~~~~~~~~~~~~il~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~v~r~g~~~~i~~~~Lv~GDII~l~~G~~vPaD 159 (787)
.......|+++++++++++++..++.+||+|++++++.+.+..+.. ..||++|+|
T Consensus 81 ~~~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~-------------------------~~~~~~P~d 135 (472)
T d1wpga4 81 GEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA-------------------------TEQDKTPLQ 135 (472)
T ss_dssp TTSTTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC-------------------------CCCCCCHHH
T ss_pred ccccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc-------------------------ccccCchHH
Confidence 2334567899999999999999999999999999999998775543 246667777
Q ss_pred eeeeeecCCceEEecccccCCccccccccccccccccCCCCCCceEeeccEEecceEEEEEEEecchhhhhHHHHHhccC
Q 003909 160 MRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT 239 (787)
Q Consensus 160 ~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~~~~ 239 (787)
.++.+
T Consensus 136 ~~l~~--------------------------------------------------------------------------- 140 (472)
T d1wpga4 136 QKLDE--------------------------------------------------------------------------- 140 (472)
T ss_dssp HHHHH---------------------------------------------------------------------------
T ss_pred HHHHH---------------------------------------------------------------------------
Confidence 65431
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCcchhhHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Q 003909 240 EDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD-PSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (787)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 318 (787)
.+..+......++.+.+...++.... .....+.+.....|..++++.++++|.+||++++++++.+
T Consensus 141 -------------~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~ 207 (472)
T d1wpga4 141 -------------FGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALG 207 (472)
T ss_dssp -------------HHHHHHHHHHHHHHHHHHHCCTTSSSCCSSSCSSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHH
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHHH
Confidence 11111111222222333332222211 1112233445567788999999999999999999999999
Q ss_pred HHHhhhccccccccccccccCCeeEEEeCCC--CccccCceEE
Q 003909 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKT--GTLTTNMMSV 359 (787)
Q Consensus 319 ~~~l~~~~i~~k~~~~le~lg~v~~i~~DKT--GTLT~~~~~v 359 (787)
++||+|+++++|+.+++|.+|+..+.|+||| +|||.|.+.+
T Consensus 208 ~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v 250 (472)
T d1wpga4 208 TRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEV 250 (472)
T ss_dssp HHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHH
Confidence 9999999999999999999999999999998 8999886655
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.94 E-value=3.8e-27 Score=200.78 Aligned_cols=112 Identities=49% Similarity=0.729 Sum_probs=101.9
Q ss_pred eeEEEeCCeE--EEeecCCCCCCcEEEecCCCccccceeeeeecCCceEEecccccCCccccccccccccccccCCCCCC
Q 003909 125 IATVLRNGCF--SILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKT 202 (787)
Q Consensus 125 ~~~v~r~g~~--~~i~~~~Lv~GDII~l~~G~~vPaD~~il~~~~g~~~vdes~ltGEs~pv~k~~~~~~~~~~~~~~~~ 202 (787)
.++|+|+|++ ++|++++|+|||||.|++|++|||||+|+++.++.+.||||+||||+.|+.|.+.+.........++.
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5789999985 68999999999999999999999999999877888999999999999999998876665566666788
Q ss_pred ceEeeccEEecceEEEEEEEecchhhhhHHHHHh
Q 003909 203 NILFSGTVVVAGRARAVVVGVGANTAMGSIRDSM 236 (787)
Q Consensus 203 ~~l~~Gt~v~~g~~~~~V~~tg~~T~~~~i~~~~ 236 (787)
|++|+||.+.+|+++++|++||.+|.+|++.+++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 9999999999999999999999999999998753
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.93 E-value=1.6e-26 Score=204.43 Aligned_cols=125 Identities=42% Similarity=0.557 Sum_probs=109.7
Q ss_pred EEEEEeccCCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhc
Q 003909 582 TFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQ 661 (787)
Q Consensus 582 ~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (787)
+..+.++++|++|++++++|+.|+++|++++|+|||+..++..+|+++||+.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~---------------------------- 62 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------- 62 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----------------------------
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh----------------------------
Confidence 3455789999999999999999999999999999999999999999999975
Q ss_pred cceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 662 HMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 662 ~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
+|++++|++|..+++.++.. +.|+|+|||.||++||+.||+||||+++++.++++||+++.++++.+++++|+
T Consensus 63 ---v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 63 ---VIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp ---EECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred ---hccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecCccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 89999999999999999865 58999999999999999999999999999999999999999999999998874
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.89 E-value=3.6e-23 Score=201.20 Aligned_cols=170 Identities=24% Similarity=0.385 Sum_probs=129.2
Q ss_pred ChhHHHHHHHHhhhcccccccccCCC---CCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccc
Q 003909 403 QLPCLLHIARCSALCNESVLQYNPDK---GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEI 479 (787)
Q Consensus 403 ~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (787)
..+.+..+..++.+||++.+..+... ......|+|+|.||+.++.+.|.... ....
T Consensus 30 ~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~---------------------~~r~ 88 (214)
T d1q3ia_ 30 RSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCGSVR---------------------KMRD 88 (214)
T ss_dssp CSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHSCHH---------------------HHHH
T ss_pred CCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCCCHH---------------------HHHh
Confidence 56678889999999999876543221 12245799999999999988765421 1234
Q ss_pred cccEeEeecCCCCCceEEEEEeeC---CeeEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccc
Q 003909 480 EFKKVSILEFSRDRKMMSVLCSHK---QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEAL 556 (787)
Q Consensus 480 ~~~~l~~~~f~~~~~~~sviv~~~---~~~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 556 (787)
.+.++..+||+|+||+|+++++.+ +.+++|+||+||.|+++|+.+.. +|...++++..++.+.+.+++|++ +|+
T Consensus 89 ~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~--~g~~~~l~~~~~~~i~~~~~~~a~-~Gl 165 (214)
T d1q3ia_ 89 RNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV--QGKEIPLDKEMQDAFQNAYLELGG-LGE 165 (214)
T ss_dssp TSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEE--TTEEEECCHHHHHHHHHHHHHHHH-TTC
T ss_pred hCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheee--CCceeechHHHHHHHHHHHHHHhh-CCc
Confidence 678899999999999999999863 46789999999999999999875 478899999999999999999998 999
Q ss_pred hhhhhhhccCCccccCCC--------CCCCCCcEEEEEeccCCCCChh
Q 003909 557 RCLALALKQMPINRQTLS--------YDDEKDLTFIGLVGMLDPPREE 596 (787)
Q Consensus 557 ~~l~~a~~~~~~~~~~~~--------~~~e~~l~~lG~i~~~d~~~~~ 596 (787)
||+++|||.++.++.... ...|+||+|+|++++.||||++
T Consensus 166 RvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 166 RVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred EEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 999999999875432211 1116899999999999999964
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.87 E-value=2.7e-22 Score=198.66 Aligned_cols=204 Identities=45% Similarity=0.680 Sum_probs=154.2
Q ss_pred EEeecCccccCCCccccCCCccccCCCChhHHHHHHHHhhhcccccccccCCCCCceeccChhHHHHHHHHHHcCCCCCC
Q 003909 376 EYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFD 455 (787)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~g~~~~~ 455 (787)
.+.++|..|.|++........ ......+.+..++.++++||++.+..+...+.....|+|+|.||+.++.+.|+....
T Consensus 21 ~~~VtG~~y~p~G~i~~~~~~--v~~~~~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~ 98 (239)
T d1wpga3 21 EFSITGSTYAPEGEVLKNDKP--IRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTE 98 (239)
T ss_dssp EEEECCSSSSSCCCEEETTEE--CCGGGCHHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCC
T ss_pred EEEEEeEeeCCceEEEECCcC--cCccccHHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHH
Confidence 456678888888776543221 122356678899999999999988766666777788999999999999999976543
Q ss_pred CchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeCC------eeEEEEeCChHHHHHhcccccccCC
Q 003909 456 SMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQ------MCVMFSKGAPESVLSRCTNILCNDN 529 (787)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~~------~~~~~~kG~~e~il~~c~~~~~~~~ 529 (787)
..... ...+.......+...|.++..+||+|+||+|+|+++.++ .+.+|+||+||.|+++|+.++.+
T Consensus 99 ~~~~~-----~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~-- 171 (239)
T d1wpga3 99 VRNLS-----KVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVG-- 171 (239)
T ss_dssp CSSSC-----HHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEET--
T ss_pred hhccc-----hhhhhccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecC--
Confidence 21100 001111111223457889999999999999999998754 36899999999999999998864
Q ss_pred CccccCCHHHHHHHHHHHHHh--hccccchhhhhhhccCCccccCCCCCC-------CCCcEEEEEecc
Q 003909 530 GFIVPMTANIRAELESRLNSL--AGKEALRCLALALKQMPINRQTLSYDD-------EKDLTFIGLVGM 589 (787)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~l~~a~~~~~~~~~~~~~~~-------e~~l~~lG~i~~ 589 (787)
+...++++..++.+.+.++++ ++ +|+||+++|||+++........+. |+||+|+|++++
T Consensus 172 ~~~~~l~~~~~~~~~~~~~~~~~a~-~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 172 TTRVPMTGPVKEKILSVIKEWGTGR-DTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp TEEEECCHHHHHHHHHHHHHHTTSS-CCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred CceeeCCHHHHHHHHHHHHHHhHhh-CCCEEEEEEEEECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 667899999999999998886 55 999999999999986554433322 789999999985
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.82 E-value=1.9e-24 Score=229.92 Aligned_cols=233 Identities=15% Similarity=0.096 Sum_probs=157.2
Q ss_pred cccEeEeecCCCCCceEEEEEeeCCe-eEEEEeCChHHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchh
Q 003909 480 EFKKVSILEFSRDRKMMSVLCSHKQM-CVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRC 558 (787)
Q Consensus 480 ~~~~l~~~~f~~~~~~~sviv~~~~~-~~~~~kG~~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 558 (787)
.+.....+||++.+++|+++...+.. +..+.+|+++.+. +++..+..+.+.+.+++. +|+|+
T Consensus 121 ~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~----------------~~~~~~~~~~~~~~~~a~-~~~r~ 183 (380)
T d1qyia_ 121 NLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH----------------VSDATLFSLKGALWTLAQ-EVYQE 183 (380)
T ss_dssp GCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT----------------CSCCGGGSTTCHHHHHHH-HHHHH
T ss_pred hccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC----------------CcHHHHHHHHhHHHHHHH-HHHHH
Confidence 44556678999999988776443222 2223344443221 112222334455666777 99999
Q ss_pred hhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCC--hhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcc
Q 003909 559 LALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPR--EEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLV 636 (787)
Q Consensus 559 l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~--~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~ 636 (787)
+++|++.++..+... ..+....|++..+++++ ++++++|++|+++|++++|+|||+..+++.+++++|+..+..
T Consensus 184 l~~~~~~~~~~~~~~----~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~ 259 (380)
T d1qyia_ 184 WYLGSKLYEDVEKKI----ARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFE 259 (380)
T ss_dssp HHHHHHHHHHHHCSC----CSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSC
T ss_pred HHHhhhccccccccc----chhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCC
Confidence 999988664322211 12333468888888854 599999999999999999999999999999999999976431
Q ss_pred ccccccccchhhc--------cC-ChHHHHHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCC--
Q 003909 637 DFVGRSYTASEFE--------EL-PAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKAD-- 705 (787)
Q Consensus 637 ~~~~~~~~~~~~~--------~~-~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~-- 705 (787)
. ..++++++.. .. ..+.-...+.....+++.+|.+|..+++.++..++.|+|+|||.||++|++.||
T Consensus 260 ~--~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~ 337 (380)
T d1qyia_ 260 A--DFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGAT 337 (380)
T ss_dssp G--GGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCE
T ss_pred c--ceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCC
Confidence 1 1122222210 00 000001122233467789999999999999999999999999999999999999
Q ss_pred -ceEecC-CccHHHHh----hcCeeccCCCchHHHHHH
Q 003909 706 -IGIAMG-SGTAVAKS----ASDMVLADDNFATIVAAV 737 (787)
Q Consensus 706 -vgia~~-~~~~~~~~----~ad~v~~~~~~~~i~~~i 737 (787)
|||+|| .+++..++ .||+++.+ +..+..++
T Consensus 338 ~Igv~~G~~g~~~~~el~~~~AD~ii~~--~~el~~il 373 (380)
T d1qyia_ 338 FIGTLTGLKGKDAAGELEAHHADYVINH--LGELRGVL 373 (380)
T ss_dssp EEEESCBTTBGGGHHHHHHTTCSEEESS--GGGHHHHH
T ss_pred EEEEecCCCCcccHHHHHhCCCCEEECC--HHHHHHHH
Confidence 999999 45544433 69999954 55565544
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.54 E-value=1.9e-14 Score=141.55 Aligned_cols=150 Identities=21% Similarity=0.197 Sum_probs=107.8
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchh-----------------------
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASE----------------------- 647 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~----------------------- 647 (787)
..+.+++.++|++|+++|++++++|||+...+..++..+++..+....++..+....
T Consensus 18 ~~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (230)
T d1wr8a_ 18 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 97 (230)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhcc
Confidence 358899999999999999999999999999999999999987654432221110000
Q ss_pred ------------------hccCChHHHHHh---hcc--------ceEEEecChhhHHHHHHHHhh----CCCEEEEEcCC
Q 003909 648 ------------------FEELPAMQQTVA---LQH--------MALFTRVEPSHKRMLVEALQN----QNEVVAMTGDG 694 (787)
Q Consensus 648 ------------------~~~~~~~~~~~~---~~~--------~~v~~~~~p~~K~~~v~~l~~----~~~~v~~vGDg 694 (787)
......+..... ... ..+-.......|...++.+.. ..+.++++|||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~ 177 (230)
T d1wr8a_ 98 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 177 (230)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred cccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecC
Confidence 000001111111 110 111112234567777766543 35679999999
Q ss_pred ccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHH
Q 003909 695 VNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEG 740 (787)
Q Consensus 695 ~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~g 740 (787)
.||++||+.||+||||+|+++.+|+.||+|+.+++.+|+++++++.
T Consensus 178 ~NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 178 ENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp GGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred ccHHHHHHHCCeEEEECCCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998764
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.53 E-value=8.4e-15 Score=149.42 Aligned_cols=67 Identities=28% Similarity=0.347 Sum_probs=60.7
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 673 HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 673 ~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
.|...++.+.+. .+.|+++|||.||++||+.||+||||+||++.+|+.||+++.+++.+||+++|++
T Consensus 213 ~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 213 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred hhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 688888888653 3578999999999999999999999999999999999999999999999999864
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.52 E-value=4e-14 Score=138.76 Aligned_cols=150 Identities=14% Similarity=0.131 Sum_probs=108.6
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchh--h-c-----------------
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASE--F-E----------------- 649 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~--~-~----------------- 649 (787)
+.++.+++.+++++|++.|++++++|||+...+..+++.+|+..+.+..++..+.... . .
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 3568899999999999999999999999999999999999998765543321111000 0 0
Q ss_pred ------------------cCChHHHH---Hhh--ccceEEE-----e--cChhhHHHHHHHHhhC----CCEEEEEcCCc
Q 003909 650 ------------------ELPAMQQT---VAL--QHMALFT-----R--VEPSHKRMLVEALQNQ----NEVVAMTGDGV 695 (787)
Q Consensus 650 ------------------~~~~~~~~---~~~--~~~~v~~-----~--~~p~~K~~~v~~l~~~----~~~v~~vGDg~ 695 (787)
........ ... ....++. . .....|...++.+.+. .+.|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 00000000 000 0111211 1 2234788888766543 45688999999
Q ss_pred cCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 696 NDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 696 ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
||++||+.||+||||+|+.+.+|+.||+|+..++.+||++++++
T Consensus 178 nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEECCCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999864
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.51 E-value=9.4e-15 Score=147.69 Aligned_cols=146 Identities=23% Similarity=0.259 Sum_probs=104.6
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccch--------------------------
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTAS-------------------------- 646 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~-------------------------- 646 (787)
+.|.+.++|++|+++|++++++|||+...+..+.+++++..+.+..+|..+...
T Consensus 21 ~~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 100 (269)
T d1rlma_ 21 NQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQ 100 (269)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHTCTT
T ss_pred ChHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcEEEEeccchHHHHHHHHHHHhhcC
Confidence 457899999999999999999999999999999999998765443222110000
Q ss_pred ------------------------------------hhccC-----------ChHHHH-------Hhhcc-ceE------
Q 003909 647 ------------------------------------EFEEL-----------PAMQQT-------VALQH-MAL------ 665 (787)
Q Consensus 647 ------------------------------------~~~~~-----------~~~~~~-------~~~~~-~~v------ 665 (787)
.+... ..+... ..... ...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (269)
T d1rlma_ 101 LNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFG 180 (269)
T ss_dssp CEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGGGHHHHHHHHHHHTTTSSEEEECSTT
T ss_pred ceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEecCCHHHHHHHHHHHHHHhhcceEEEEEcCc
Confidence 00000 000000 00000 001
Q ss_pred EEecChh--hHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 666 FTRVEPS--HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 666 ~~~~~p~--~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
+.+..|. .|...++.+.+. .+.|++||||.||++||+.||.||||+|+.+.+|+.|++|+.+++.+||+++|+
T Consensus 181 ~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 181 FIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred eEEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 2233443 588888777653 356899999999999999999999999999999999999999999999999986
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.48 E-value=9.1e-14 Score=140.45 Aligned_cols=150 Identities=18% Similarity=0.249 Sum_probs=106.7
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCc---ccccccccc----chhh--------------
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHL---VDFVGRSYT----ASEF-------------- 648 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~---~~~~~~~~~----~~~~-------------- 648 (787)
+.++.+++.++|++|+++|++++++|||+...+..+.+++++..+. +..+|..+. +..+
T Consensus 19 ~~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~ 98 (271)
T d1rkqa_ 19 DHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLE 98 (271)
T ss_dssp TSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHH
Confidence 3468899999999999999999999999999999999999987642 111111000 0000
Q ss_pred ---------------------------------------------ccC-------------ChHHHHHh---hc-----c
Q 003909 649 ---------------------------------------------EEL-------------PAMQQTVA---LQ-----H 662 (787)
Q Consensus 649 ---------------------------------------------~~~-------------~~~~~~~~---~~-----~ 662 (787)
... ........ +. .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 178 (271)
T d1rkqa_ 99 KLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEK 178 (271)
T ss_dssp HHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHH
T ss_pred HHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcc
Confidence 000 00000000 00 0
Q ss_pred ceE------EEecChh--hHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCc
Q 003909 663 MAL------FTRVEPS--HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNF 730 (787)
Q Consensus 663 ~~v------~~~~~p~--~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~ 730 (787)
..+ +....|. .|...++.+.+. ...++++|||.||++||+.|++|+||+|+.+.+|+.||+|+.+++.
T Consensus 179 ~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~ 258 (271)
T d1rkqa_ 179 YTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLE 258 (271)
T ss_dssp EEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTT
T ss_pred eEEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCc
Confidence 111 1223333 688888887653 4568999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHH
Q 003909 731 ATIVAAVAE 739 (787)
Q Consensus 731 ~~i~~~i~~ 739 (787)
+|+++++++
T Consensus 259 ~Gv~~~l~~ 267 (271)
T d1rkqa_ 259 DGVAFAIEK 267 (271)
T ss_dssp THHHHHHHH
T ss_pred ChHHHHHHH
Confidence 999999863
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.41 E-value=9.1e-14 Score=139.49 Aligned_cols=67 Identities=31% Similarity=0.367 Sum_probs=60.7
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 673 HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 673 ~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
.|...++.+.++ .+.++++|||.||++||+.||.||||+||.+.+|+.||+|+.+++.+||+++|++
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 688888777653 4678999999999999999999999999999999999999999999999999965
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.38 E-value=9.7e-13 Score=132.38 Aligned_cols=66 Identities=24% Similarity=0.314 Sum_probs=59.3
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 673 HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 673 ~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
.|...++.+.+. ...|++||||.||++||+.||+||||+||.+.+|+.||+|+.+++.+||+++++
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 688877777543 356888999999999999999999999999999999999999999999999985
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.36 E-value=1.3e-12 Score=120.61 Aligned_cols=108 Identities=21% Similarity=0.194 Sum_probs=88.6
Q ss_pred HHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecChhhHHHHH
Q 003909 599 NAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLV 678 (787)
Q Consensus 599 ~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 678 (787)
.+|+.|++.|+.++++||+....+...++++++.. ++.. ..+|...+
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~-------------------------------~~~~--~~~K~~~l 85 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-------------------------------FFLG--KLEKETAC 85 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-------------------------------EEES--CSCHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc-------------------------------cccc--cccHHHHH
Confidence 58999999999999999999999999999999865 2222 23455444
Q ss_pred HHH----hhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchH-HHHHHHH
Q 003909 679 EAL----QNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFAT-IVAAVAE 739 (787)
Q Consensus 679 ~~l----~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~-i~~~i~~ 739 (787)
+.+ .-..+.|+++||+.||++||+.|++|+||+||.+.+|+.||+|+.++.-.| |.+++++
T Consensus 86 ~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~ 151 (177)
T d1k1ea_ 86 FDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDM 151 (177)
T ss_dssp HHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHH
T ss_pred HHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCchHHHHHHH
Confidence 443 334678999999999999999999999999999999999999998877666 5555543
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.35 E-value=9.1e-13 Score=133.74 Aligned_cols=66 Identities=24% Similarity=0.262 Sum_probs=55.0
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccC-CCchHHHHHHH
Q 003909 673 HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLAD-DNFATIVAAVA 738 (787)
Q Consensus 673 ~K~~~v~~l~~~----~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~-~~~~~i~~~i~ 738 (787)
.|...++.+.+. .+.|+++|||.||++||+.||+||||+||.+.+|+.||+|+.+ ++.++|+++++
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 566666655443 4579999999999999999999999999999999999999964 45666888875
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.23 E-value=9.9e-12 Score=122.77 Aligned_cols=51 Identities=10% Similarity=0.111 Sum_probs=44.2
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccc
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~ 640 (787)
.+...+.++++|++|+++|++++++|||++..+..+.+++++..+.+..+|
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nG 65 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENG 65 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCSCEEETTT
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccccccccCC
Confidence 455578899999999999999999999999999999999999876654433
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.18 E-value=1.5e-11 Score=121.67 Aligned_cols=146 Identities=16% Similarity=0.146 Sum_probs=99.6
Q ss_pred ChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCc--cccccccc-cchh--------h-ccC----------
Q 003909 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHL--VDFVGRSY-TASE--------F-EEL---------- 651 (787)
Q Consensus 594 ~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~--~~~~~~~~-~~~~--------~-~~~---------- 651 (787)
.++..+++.+++++|+.++++|||+...+..+.+++++..+. +..++..+ .... + ...
T Consensus 20 ~~~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (244)
T d1s2oa1 20 ALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIAD 99 (244)
T ss_dssp HHHHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHh
Confidence 345566777788999999999999999999999999987542 22222111 0000 0 000
Q ss_pred --------------------------ChHH---HHHhhc----cc--------eEEEecChhhHHHHHHHHhhC----CC
Q 003909 652 --------------------------PAMQ---QTVALQ----HM--------ALFTRVEPSHKRMLVEALQNQ----NE 686 (787)
Q Consensus 652 --------------------------~~~~---~~~~~~----~~--------~v~~~~~p~~K~~~v~~l~~~----~~ 686 (787)
.... ...... .. .+-.......|...++.+.+. .+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~ 179 (244)
T d1s2oa1 100 GFEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPS 179 (244)
T ss_dssp TCTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGG
T ss_pred hcccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChh
Confidence 0000 000000 00 011112345788888887654 35
Q ss_pred EEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcC-------eeccCCCchHHHHHHHH
Q 003909 687 VVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD-------MVLADDNFATIVAAVAE 739 (787)
Q Consensus 687 ~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad-------~v~~~~~~~~i~~~i~~ 739 (787)
.|+++|||.||++||+.||.||+|+|+.+.+++.|| ++...++.+||.+++++
T Consensus 180 ~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 180 QTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp GEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred hEEEEcCCCCCHHHHhhCCcEEEeCCCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 688899999999999999999999999999999998 67888889999998865
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.13 E-value=3.1e-11 Score=116.00 Aligned_cols=130 Identities=19% Similarity=0.246 Sum_probs=95.1
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe--
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR-- 668 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-- 668 (787)
.++.+++.+.++.++..|..++++||.....+....++.+........ +...... .......
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~------------~~~~~~~~~ 137 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANR----LIVKDGK------------LTGDVEGEV 137 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEE----EEEETTE------------EEEEEECSS
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhh----hcccccc------------ccccccccc
Confidence 467788999999999999999999999999999999998886532110 0000000 0000000
Q ss_pred cChhhH----HHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHH
Q 003909 669 VEPSHK----RMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAV 737 (787)
Q Consensus 669 ~~p~~K----~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i 737 (787)
..+..| ..+.+.++...+.++++|||.||++|++.||+|||| |+.+.+++.||+|+.++|+++|.++|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 138 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp CSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred cccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 111222 333444444566789999999999999999999999 89999999999999999999998765
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=5e-11 Score=115.22 Aligned_cols=124 Identities=17% Similarity=0.182 Sum_probs=90.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc--cchhhccCChHHHHHhhccceEEEec
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY--TASEFEELPAMQQTVALQHMALFTRV 669 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~ 669 (787)
+++|++.+.|+.|+++|++++++||.....+.++++.+|++....-.+...+ +|........ ....
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~------------~p~~ 149 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDET------------QPTA 149 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTT------------SGGG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccceee------------eeee
Confidence 4689999999999999999999999999999999999999753211000000 0100000000 0003
Q ss_pred ChhhHHHHHHHHhhC--CCEEEEEcCCccCHHHHhhCCceEecC-C-ccHHHHhhcCeeccC
Q 003909 670 EPSHKRMLVEALQNQ--NEVVAMTGDGVNDAPALKKADIGIAMG-S-GTAVAKSASDMVLAD 727 (787)
Q Consensus 670 ~p~~K~~~v~~l~~~--~~~v~~vGDg~ND~~ml~~A~vgia~~-~-~~~~~~~~ad~v~~~ 727 (787)
.+..|..+++.++.. .+.++++|||.||++|++.||++||++ + ....+++.||+++.+
T Consensus 150 ~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 150 ESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp STTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred ccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC
Confidence 356799999888653 457899999999999999999999997 3 457888889998854
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.06 E-value=2.9e-10 Score=108.70 Aligned_cols=130 Identities=15% Similarity=0.180 Sum_probs=90.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
+..++....++.+ +.+.+.++.|+.............++.....+.. ..... ..........+
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~--------------~~~~~~~~~~~ 131 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKL--EIDDS--------------DRVVGYQLRQK 131 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEE--EECTT--------------SCEEEEECCSS
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhccee--eeecc--------------cccccccccch
Confidence 3455666666665 5789999999999999999999999875432100 00000 00112223445
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
..+...++.++...+.|+|||||.||++||+.||+||||++..+..++++|+++.+ +++++...+.+
T Consensus 132 ~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~~-~~~d~~~~~~~ 198 (206)
T d1rkua_ 132 DPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH-TYEDLKREFLK 198 (206)
T ss_dssp SHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEEC-SHHHHHHHHHH
T ss_pred hhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEECCCHHHHHhCCCceeec-CHHHHHHHHHH
Confidence 56677788888889999999999999999999999999954444455566777754 56677766644
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.01 E-value=8.7e-10 Score=107.43 Aligned_cols=44 Identities=9% Similarity=0.057 Sum_probs=40.4
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCC
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD 633 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~ 633 (787)
+..+.+.++++|++|+++|+.++++|||+...+..+.+++++..
T Consensus 19 ~~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 19 HSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp SCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred cCcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 34578899999999999999999999999999999999999864
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.99 E-value=2.8e-10 Score=110.72 Aligned_cols=147 Identities=16% Similarity=0.096 Sum_probs=103.7
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
+++|++.+.++.|+++|++++++|+.....+..+.+++|+..+..+. ...+.+........ ...........|
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an-~~~~~~~~~~~~~~------~~~~~~~~~~k~ 147 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCN-HASFDNDYIHIDWP------HSCKGTCSNQCG 147 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEE-EEECSSSBCEEECT------TCCCTTCCSCCS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeee-eEEEeCCcceeccc------cccccccccCCH
Confidence 46899999999999999999999999999999999999986543210 00111110000000 000012234567
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHHHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYN 745 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~~gR~~~~ 745 (787)
..|..+++.++..++.|+++||+.||++|++.||+++|+++..+.+++..--...-++++.|...+++-.....
T Consensus 148 ~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~~~ 221 (226)
T d2feaa1 148 CCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQE 221 (226)
T ss_dssp SCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999987766666653222334578888777765444433
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.62 E-value=4.6e-09 Score=102.78 Aligned_cols=55 Identities=15% Similarity=0.274 Sum_probs=47.7
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCC----ccCHHHHhhCC-ceEecCCccHHHHhhcCeecc
Q 003909 672 SHKRMLVEALQNQ-NEVVAMTGDG----VNDAPALKKAD-IGIAMGSGTAVAKSASDMVLA 726 (787)
Q Consensus 672 ~~K~~~v~~l~~~-~~~v~~vGDg----~ND~~ml~~A~-vgia~~~~~~~~~~~ad~v~~ 726 (787)
-.|...++.+... .+.|+++||+ .||++||+.|+ .|+||+|+.+.+|..+|+++.
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFFP 244 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHCT
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHHHHHHHHhcCC
Confidence 3688888888654 6789999995 59999999998 699999999999999999863
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.55 E-value=1.4e-07 Score=91.12 Aligned_cols=62 Identities=15% Similarity=0.333 Sum_probs=46.1
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
..|...++.+.... .++++||+.||++||+.|+.|+||++|.. +..|++.+.+ .+.+..+++
T Consensus 158 ~~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~~g~~--~~~A~~~~~~--~~ev~~~l~ 219 (229)
T d1u02a_ 158 VNKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIKVGEG--ETHAKFHVAD--YIEMRKILK 219 (229)
T ss_dssp CCHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEEESSS--CCCCSEEESS--HHHHHHHHH
T ss_pred CCHHHHHHHHhccc-cceeecCCCChHHHHhccCCeEEEEeCCC--CccCeEEcCC--HHHHHHHHH
Confidence 47999999998765 56778999999999999977766654432 4578998865 444655553
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.06 E-value=4.7e-07 Score=87.95 Aligned_cols=51 Identities=18% Similarity=0.367 Sum_probs=37.1
Q ss_pred hHHHHHHHHhh-CCCEEEEEcC----CccCHHHHhhCC-ceEecCCccHHHHhhcCee
Q 003909 673 HKRMLVEALQN-QNEVVAMTGD----GVNDAPALKKAD-IGIAMGSGTAVAKSASDMV 724 (787)
Q Consensus 673 ~K~~~v~~l~~-~~~~v~~vGD----g~ND~~ml~~A~-vgia~~~~~~~~~~~ad~v 724 (787)
.|...++.+.. ..+.|++||| |.||++||+.|+ .|++|+| .+.+++.++.+
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~-~~~~~~~~~~l 241 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA-PEDTRRICELL 241 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS-HHHHHHHHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC-HHHHHHHHHHH
Confidence 57766766654 3578999999 779999999998 6788866 56677766544
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.99 E-value=5.8e-06 Score=78.67 Aligned_cols=118 Identities=15% Similarity=0.090 Sum_probs=84.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+|+..... .++..++.... ...|
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~----~i~~~~~~~~~----------------Kp~~ 147 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD----ALASAEKLPYS----------------KPHP 147 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEECTTSSCC----------------TTST
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccccc----ccccccccccc----------------hhhH
Confidence 356899999999999999999999999999999999999975431 22222221111 1223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceE-ecCC---ccHHHHhhcCeeccCCC
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AMGS---GTAVAKSASDMVLADDN 729 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgi-a~~~---~~~~~~~~ad~v~~~~~ 729 (787)
+--..+++.+.-..+.+++|||+.+|+.|-+.||+.. .+.. ..+.....||+++.+-.
T Consensus 148 ~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~ 209 (218)
T d1te2a_ 148 QVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLT 209 (218)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGG
T ss_pred HHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChh
Confidence 4445667777777889999999999999999999844 3422 12223346788876543
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.99 E-value=6.2e-06 Score=79.14 Aligned_cols=125 Identities=15% Similarity=0.131 Sum_probs=82.3
Q ss_pred CCChhHHHHHHHHHhCC-CEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAG-IRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~g-i~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
++-|++.+.+++|++.| +++.++|+.....+....+.+|+..... .++.+++...-. -.
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd----~i~~~~~~~~~k----------------~~ 150 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP----FGAFADDALDRN----------------EL 150 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS----CEECTTTCSSGG----------------GH
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccccc----cccccccccccc----------------ch
Confidence 34689999999999987 8999999999999999999999986531 111111110000 01
Q ss_pred hhhHHHHHHHHh---hCCCEEEEEcCCccCHHHHhhCCc---eEecCCcc-HH-HHhhcCeeccCCCchHHHHHHH
Q 003909 671 PSHKRMLVEALQ---NQNEVVAMTGDGVNDAPALKKADI---GIAMGSGT-AV-AKSASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 671 p~~K~~~v~~l~---~~~~~v~~vGDg~ND~~ml~~A~v---gia~~~~~-~~-~~~~ad~v~~~~~~~~i~~~i~ 738 (787)
|..-...++.+. -..+.++||||+.+|+.|-+.||+ +|+-|... +. .+..||+++. ++..+.+++.
T Consensus 151 p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~--~~~el~~~l~ 224 (228)
T d2hcfa1 151 PHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFK--NFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEES--CSCCHHHHHH
T ss_pred hHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEEC--CHHHHHHHHH
Confidence 121122333332 234689999999999999999996 44445333 32 3335899985 4667777664
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.88 E-value=1.5e-05 Score=78.37 Aligned_cols=128 Identities=16% Similarity=0.186 Sum_probs=79.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccc--cccccccchh-----hccCChHHHHHhhccce
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD--FVGRSYTASE-----FEELPAMQQTVALQHMA 664 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 664 (787)
++|+++.+.++.|++.|+++.++||.-...+.++++++|+...... .+...+.+.. ...+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~------------- 201 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGEL------------- 201 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSC-------------
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEeeccCCc-------------
Confidence 5899999999999999999999999999999999999998764211 1111111100 0000
Q ss_pred EEEecChhhHHHHH----HHHh--hCCCEEEEEcCCccCHHHHhhC---CceEecC--Ccc-----HHHHhhcCeeccCC
Q 003909 665 LFTRVEPSHKRMLV----EALQ--NQNEVVAMTGDGVNDAPALKKA---DIGIAMG--SGT-----AVAKSASDMVLADD 728 (787)
Q Consensus 665 v~~~~~p~~K~~~v----~~l~--~~~~~v~~vGDg~ND~~ml~~A---~vgia~~--~~~-----~~~~~~ad~v~~~~ 728 (787)
.....|...+ ..++ .....|+++|||.||+.|.+.+ +..++.| +.. +.-.+.-|+|+.++
T Consensus 202 ----i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d 277 (291)
T d2bdua1 202 ----IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKE 277 (291)
T ss_dssp ----CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETC
T ss_pred ----cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecC
Confidence 0111222211 2222 2346788889999999998753 3344433 222 33335679998765
Q ss_pred CchHHHHH
Q 003909 729 NFATIVAA 736 (787)
Q Consensus 729 ~~~~i~~~ 736 (787)
..-.++..
T Consensus 278 ~~~~v~~~ 285 (291)
T d2bdua1 278 ESLEVVNS 285 (291)
T ss_dssp CBCHHHHH
T ss_pred CChhHHHH
Confidence 54444433
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.88 E-value=5.4e-06 Score=79.15 Aligned_cols=123 Identities=20% Similarity=0.226 Sum_probs=86.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|++.|++++++|+.....+..+.+++|+..... .++...+.... ...|
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~----~~~~~~~~~~~----------------kp~p 154 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS----EMLGGQSLPEI----------------KPHP 154 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS----EEECTTTSSSC----------------TTSS
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcc----ccccccccccc----------------cccc
Confidence 467999999999999999999999999999999999999976431 11111111111 1224
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCC---c-cHHHHhhcCeeccCCCchHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGS---G-TAVAKSASDMVLADDNFATIVAA 736 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~---~-~~~~~~~ad~v~~~~~~~~i~~~ 736 (787)
+--..+.+.++-..+.+++|||+.+|+.+-+.||+ .|.+.. . .+.....+|+++.+ +..+..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~--l~dL~~i 222 (224)
T d2hsza1 155 APFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD--FADILKI 222 (224)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS--GGGGGGG
T ss_pred hhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECC--HHHHHHh
Confidence 44456666677678889999999999999999998 445532 1 23334458888754 5555444
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.83 E-value=3.3e-05 Score=75.40 Aligned_cols=101 Identities=18% Similarity=0.115 Sum_probs=74.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|+++|+++.++||.+...+..+.+.+|+.....+ .++.+++...- ...|
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d---~~~~~d~~~~~----------------KP~p 159 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPD---FLVTPDDVPAG----------------RPYP 159 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCS---CCBCGGGSSCC----------------TTSS
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccc---ccccccccccc----------------ccCh
Confidence 5789999999999999999999999999999999999998764321 12222222111 1234
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCccCHHHHhhCCce-EecC
Q 003909 672 SHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIG-IAMG 711 (787)
Q Consensus 672 ~~K~~~v~~l~~~-~~~v~~vGDg~ND~~ml~~A~vg-ia~~ 711 (787)
+.=...++.+... .+.++||||+.+|+.+-+.||+- |++.
T Consensus 160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~ 201 (257)
T d1swva_ 160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVI 201 (257)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEc
Confidence 4556667777653 57899999999999999999973 4443
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.62 E-value=0.00012 Score=69.71 Aligned_cols=125 Identities=16% Similarity=0.164 Sum_probs=86.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.++++.|+ +|++++++|+..........+.+|+.... ..++...+.... .-.|
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~f----d~i~~s~~~~~~----------------KP~~ 158 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLF----DSITTSEEAGFF----------------KPHP 158 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGC----SEEEEHHHHTBC----------------TTSH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccc----cccccccccccc----------------chhh
Confidence 46789999999996 57999999999999999999999987542 112222111110 1123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCC-ccCHHHHhhCCceEe-c--CCccHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDG-VNDAPALKKADIGIA-M--GSGTAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg-~ND~~ml~~A~vgia-~--~~~~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
+-=..+++.+.-....+++|||+ .+|+.+-+.||+... + +.........+|+++.+ +..+.+++++
T Consensus 159 ~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~~ 228 (230)
T d1x42a1 159 RIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSD--LREVIKIVDE 228 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESS--TTHHHHHHHH
T ss_pred HHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECC--HHHHHHHHHH
Confidence 33345556665566789999998 589999999998533 3 33445555678998865 7778887753
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.53 E-value=0.00014 Score=66.47 Aligned_cols=135 Identities=19% Similarity=0.165 Sum_probs=79.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHH---------------HHHHHHhCCCCCccccccccccchhhccCChHHH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTA---------------ESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQ 656 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a---------------~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (787)
++-|++.+++++|+++|++++++|..+.... .......|+..... .+.....+.-..
T Consensus 27 ~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~cp~~p~~~~~--- 98 (182)
T d2gmwa1 27 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGI-----YYCPHHPQGSVE--- 98 (182)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEE-----EEECCBTTCSSG---
T ss_pred eECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccce-----eecccccccccc---
Confidence 3568999999999999999999999874221 11122223221100 000000000000
Q ss_pred HHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce--EecC--C-ccHHHHhhcCeeccCCCch
Q 003909 657 TVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG--IAMG--S-GTAVAKSASDMVLADDNFA 731 (787)
Q Consensus 657 ~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg--ia~~--~-~~~~~~~~ad~v~~~~~~~ 731 (787)
.......+..-.|.--..+++.+.-..+.++||||+.+|+.+-+.||++ +.+. . ..+.....||+|+.+ +.
T Consensus 99 --~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~--l~ 174 (182)
T d2gmwa1 99 --EFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS--LA 174 (182)
T ss_dssp --GGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC--GG
T ss_pred --cccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECC--HH
Confidence 0000000111334445666777776777899999999999999999985 3443 2 245566679999854 77
Q ss_pred HHHHHHH
Q 003909 732 TIVAAVA 738 (787)
Q Consensus 732 ~i~~~i~ 738 (787)
.+.++|+
T Consensus 175 dl~~~ik 181 (182)
T d2gmwa1 175 DLPQAIK 181 (182)
T ss_dssp GHHHHHH
T ss_pred HHHHHhc
Confidence 7777765
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.52 E-value=2.8e-05 Score=73.18 Aligned_cols=120 Identities=14% Similarity=0.133 Sum_probs=82.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.+++.+.++.++..+ +++++|+.+...++.+.+.+|+..... .++..... ....|
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd----~v~~~~~~------------------~~~~p 140 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFD----GIYGSSPE------------------APHKA 140 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCS----EEEEECSS------------------CCSHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccc----cccccccc------------------ccccc
Confidence 46788999999999875 899999999999999999999986431 11111110 01223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEec--C-CccHHHHh-hcCeeccCCCchHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAM--G-SGTAVAKS-ASDMVLADDNFATIVAA 736 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~--~-~~~~~~~~-~ad~v~~~~~~~~i~~~ 736 (787)
+....+++.++-..+.+++|||+.+|+.+-+.||+ .|++ | +..+...+ .+|+++.+ +..+...
T Consensus 141 ~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~--l~el~~~ 208 (210)
T d2ah5a1 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLAY 208 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHHH
T ss_pred cccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHHH
Confidence 43445555555557789999999999999999998 4554 3 23344443 48998765 5555443
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.43 E-value=5.8e-05 Score=70.62 Aligned_cols=101 Identities=15% Similarity=0.136 Sum_probs=72.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.|++.++++.|+++|+++.++|+... .+..+.+++|+..+. ..++..++... ....|
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f----~~i~~s~~~~~----------------~Kp~~ 140 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF----TEILTSQSGFV----------------RKPSP 140 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE----EEEECGGGCCC----------------CTTSS
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccc----ccccccccccc----------------cchhH
Confidence 4579999999999999999999999765 456788999987643 11222111111 11234
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EecCCc
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMGSG 713 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg-ia~~~~ 713 (787)
+--..+++.+.-..+.+++|||+.+|+.+-+.||+. |++..+
T Consensus 141 ~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~ 183 (204)
T d2go7a1 141 EAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLES 183 (204)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCC
T ss_pred HHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCC
Confidence 455666777776778999999999999999999984 456544
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.21 E-value=0.00029 Score=63.06 Aligned_cols=94 Identities=10% Similarity=0.028 Sum_probs=68.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCH-HHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNK-STAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~-~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
++.|++.+++++|+++|++++++|+.+. ..+..+.+.+++...... +.....
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~---------------------------~~~~~k 98 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQ---------------------------REIYPG 98 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSE---------------------------EEESSS
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccccccccee---------------------------eecccC
Confidence 5789999999999999999999997655 456667777777543211 111122
Q ss_pred --hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCC
Q 003909 671 --PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGS 712 (787)
Q Consensus 671 --p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~ 712 (787)
|+.-..+.+.+.-..+.+++|||+.+|+.+-+.||+ .|.+..
T Consensus 99 p~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~ 143 (164)
T d1u7pa_ 99 SKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRD 143 (164)
T ss_dssp CHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSS
T ss_pred CChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 333445666666667889999999999999999999 445543
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.20 E-value=0.00053 Score=62.79 Aligned_cols=109 Identities=18% Similarity=0.082 Sum_probs=73.3
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.|++.+.++.|+++|++++++|+.+.... ...+++|+.... ..++.+++...-+ ..|
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~f----d~i~~~~~~~~~K----------------P~p 137 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYF----TEVVTSSSGFKRK----------------PNP 137 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGE----EEEECGGGCCCCT----------------TSC
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccccc----ccccccccccccC----------------CCH
Confidence 4678999999999999999999999876554 567888887542 1222222211100 123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEecCCccHHHHhhcCe
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM 723 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~~~~~~~~~~~ad~ 723 (787)
+--..+.+.+. .+.+++|||+.+|+.+-+.||+-...=+.....++..|+
T Consensus 138 ~~~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 138 ESMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHHHcC--CCCeEEEeCCHHHHHHHHHcCCEEEEECCCCChHhhcCC
Confidence 33334444443 345899999999999999999975443566777766653
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=97.16 E-value=9.8e-05 Score=71.71 Aligned_cols=38 Identities=13% Similarity=0.257 Sum_probs=31.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI 629 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~ 629 (787)
..-+++.++|++|+++|++++++|+++..+...+++++
T Consensus 18 ~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 18 EPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp EECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 33489999999999999999999988877777766654
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.15 E-value=8.4e-05 Score=69.64 Aligned_cols=114 Identities=12% Similarity=0.156 Sum_probs=79.5
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.|++.+.++.|++ +++++++|+.....+..+.+++|+.... ..++........ ...|
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f----~~i~~~~~~~~~----------------KP~p 140 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM----AVTISADDTPKR----------------KPDP 140 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGE----EEEECGGGSSCC----------------TTSS
T ss_pred ccccchhhhhhhhcc-cccccccccccccccccccccccccccc----cccccccccccc----------------hhhh
Confidence 356899999999975 7999999999999999999999987643 112222211111 1234
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec---CCccHHHHhhcCeecc
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM---GSGTAVAKSASDMVLA 726 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~---~~~~~~~~~~ad~v~~ 726 (787)
+--..+++.++-..+.+++|||+.+|+.+-+.||+.... |..+..-.+.+|+++.
T Consensus 141 ~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~ 198 (207)
T d2hdoa1 141 LPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQ 198 (207)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEES
T ss_pred hhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeC
Confidence 444566666665667899999999999999999997653 3333333456788764
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.10 E-value=0.00074 Score=64.68 Aligned_cols=118 Identities=14% Similarity=0.111 Sum_probs=82.1
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
-.+.|++.+++++|+++|+++.++|+..........+.+|+........ ...+... ...-.
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~~----------------~~KP~ 186 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVD---GHFDTKI----------------GHKVE 186 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCS---EEECGGG----------------CCTTC
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcc---eeecccc----------------ccCCC
Confidence 4578999999999999999999999999999999999998765321100 0000000 01133
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEec----CCc-cHHHHhhcCeeccC
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM----GSG-TAVAKSASDMVLAD 727 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia~----~~~-~~~~~~~ad~v~~~ 727 (787)
|+-=....+.+.-..+.++||||..+|+.+-++||+.... |+. .......++.++.+
T Consensus 187 p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~s 248 (253)
T d1zs9a1 187 SESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 248 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred cHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECC
Confidence 4444566677777788999999999999999999995543 333 23344455666643
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.02 E-value=0.0011 Score=63.50 Aligned_cols=125 Identities=15% Similarity=0.143 Sum_probs=84.2
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.|++.+++++|+ +|++++++|+.+........+++|+..+.- .++...+...- .-.|
T Consensus 109 ~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd----~i~~s~~~~~~----------------KP~p 167 (247)
T d2gfha1 109 ILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFD----AIVIGGEQKEE----------------KPAP 167 (247)
T ss_dssp CCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCS----EEEEGGGSSSC----------------TTCH
T ss_pred ccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhcccccccc----ccccccccccc----------------hhhh
Confidence 46799999999998 589999999999999999999999876431 12222111110 1123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCce-EecC--Cc--cHHHHhhcCeeccCCCchHHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIG-IAMG--SG--TAVAKSASDMVLADDNFATIVAAVAE 739 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~vg-ia~~--~~--~~~~~~~ad~v~~~~~~~~i~~~i~~ 739 (787)
+-=..+++.+.-..+.+++|||+. +|+.+-+.||+. +..- .+ .......+|+++.+ +..+..+++.
T Consensus 168 ~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~--l~eL~~ll~~ 239 (247)
T d2gfha1 168 SIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSS--VLELPALLQS 239 (247)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESS--GGGHHHHHHH
T ss_pred hhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECC--HHHHHHHHHH
Confidence 322455566665667899999996 899999999996 5431 11 12223347888764 7777777753
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.88 E-value=0.00028 Score=75.02 Aligned_cols=49 Identities=69% Similarity=1.181 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHhhhheecC
Q 003909 739 EGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVSLISVNI 787 (787)
Q Consensus 739 ~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~l 787 (787)
.||.++.|++|.+.|.++.|+..++..+++.+++.|.|++|+|+||+||
T Consensus 227 ~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~~p~pl~~~qILwinl 275 (472)
T d1wpga4 227 LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNL 275 (472)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCSCCHHHHHHHHH
T ss_pred HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcCCCccccHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999999995
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.85 E-value=0.00047 Score=60.46 Aligned_cols=98 Identities=12% Similarity=0.030 Sum_probs=60.5
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHh--hccceEEE
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVA--LQHMALFT 667 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~ 667 (787)
++++.|++.+.++.|+++|++++++|||+........+.++.... ..... ......+.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~--------------------~~~~~~~~~~~~~~~ 93 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRK--------------------WVEDIAGVPLVMQCQ 93 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHH--------------------HHHHTTCCCCSEEEE
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhh--------------------hhhhcCCCcEEEeec
Confidence 567899999999999999999999999985432111111110000 00000 00000111
Q ss_pred e------cChhhHHHHHHHHhhCCC-EEEEEcCCccCHHHHhhCCce
Q 003909 668 R------VEPSHKRMLVEALQNQNE-VVAMTGDGVNDAPALKKADIG 707 (787)
Q Consensus 668 ~------~~p~~K~~~v~~l~~~~~-~v~~vGDg~ND~~ml~~A~vg 707 (787)
+ ..+..|..+++.+...+. .++++||...|+.|.+.+|+-
T Consensus 94 ~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~ 140 (149)
T d1ltqa1 94 REQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 140 (149)
T ss_dssp CCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCc
Confidence 1 123457777777665544 567889999999999999984
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=96.65 E-value=0.0018 Score=62.60 Aligned_cols=61 Identities=30% Similarity=0.391 Sum_probs=42.5
Q ss_pred HHHHHHHhhCCCEEEEEcCCc-cCHHHHhhCCc-eEecCCc---cHHHHhh---cCeeccCCCchHHHHHH
Q 003909 675 RMLVEALQNQNEVVAMTGDGV-NDAPALKKADI-GIAMGSG---TAVAKSA---SDMVLADDNFATIVAAV 737 (787)
Q Consensus 675 ~~~v~~l~~~~~~v~~vGDg~-ND~~ml~~A~v-gia~~~~---~~~~~~~---ad~v~~~~~~~~i~~~i 737 (787)
..+.+.+.-..+.++||||+. +|+.+-+.||+ +|.+..| .+..... +|+++. ++..+.++|
T Consensus 192 ~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~--~l~eL~~~l 260 (261)
T d1vjra_ 192 DVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFK--NLGELAKAV 260 (261)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEES--SHHHHHHHH
T ss_pred HHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEEC--CHHHHHHHh
Confidence 455566666678899999995 69999999998 6666432 2333332 488886 466776665
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=96.64 E-value=0.00095 Score=62.72 Aligned_cols=113 Identities=9% Similarity=0.071 Sum_probs=75.3
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
.++.|++.+.++.|++.|+++.++|+... +....+..|+..... .++...+... ..-.
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~----~i~~~~~~~~----------------~KP~ 147 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFD----AIADPAEVAA----------------SKPA 147 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCS----EECCTTTSSS----------------CTTS
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhccccccc----cccccccccc----------------cccC
Confidence 35778999999999999999999999754 567888888876431 1222221111 0122
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCCccHHHHhhcCeeccC
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGSGTAVAKSASDMVLAD 727 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~~~~~~~~~ad~v~~~ 727 (787)
|+-=..+.+.+.-..+.+++|||+.+|+.+-+.||+ +|.++++ .....++.++.+
T Consensus 148 ~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~--~~~~~~~~~~~~ 203 (221)
T d1o08a_ 148 PDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRP--EDLGDDIVIVPD 203 (221)
T ss_dssp THHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCH--HHHCSSSEEESS
T ss_pred hHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECCh--hhcccccEEcCC
Confidence 333345555565567789999999999999999998 5666543 223345555443
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=96.53 E-value=0.001 Score=64.06 Aligned_cols=44 Identities=9% Similarity=0.082 Sum_probs=34.3
Q ss_pred CCCCChhHHHHHHHHHhCCCEEEEEc---CCCHHHHHHHHHHhCCCC
Q 003909 590 LDPPREEVKNAMLSCMTAGIRVIVVT---GDNKSTAESICHKIGAFD 633 (787)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~i~T---Gd~~~~a~~~a~~~gi~~ 633 (787)
.+++-|++.++|+.|+++|++++++| ++.+.......+++|++-
T Consensus 17 ~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~ 63 (250)
T d2c4na1 17 DNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 63 (250)
T ss_dssp TTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCC
T ss_pred CCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccc
Confidence 34444789999999999999999998 566666666667788754
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=96.47 E-value=0.0018 Score=59.98 Aligned_cols=137 Identities=18% Similarity=0.108 Sum_probs=71.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCH--------HH-------HHHHHHHhCCCCCccccccccccchhhccCChHHH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNK--------ST-------AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQ 656 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~--------~~-------a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (787)
++-|++.++|++|+++|++++++|..+. .. .....++.|+...........-.+. .......
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~-~~~~~~~-- 124 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGV-GPLAIPD-- 124 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCC-STTCCSS--
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccceEEEeccccccc-ccccccc--
Confidence 4679999999999999999999996431 11 1222333443211100000000000 0000000
Q ss_pred HHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCCccHHHHhhcCeecc-CCCchHHH
Q 003909 657 TVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGSGTAVAKSASDMVLA-DDNFATIV 734 (787)
Q Consensus 657 ~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~~~~~~~~~ad~v~~-~~~~~~i~ 734 (787)
..+-.-.|.--.++.+.+.-..+.+.||||..+|+.+-+.||+ +|.+..+.... ..++... -.+...+.
T Consensus 125 -------~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~--~~~~~~~~~~~~~e~~ 195 (209)
T d2o2xa1 125 -------HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAV--QPGFAIRPLRDSSELG 195 (209)
T ss_dssp -------CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEE--ETTEEEEEESSHHHHH
T ss_pred -------cccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcc--cCCccccCccchhHHH
Confidence 0000122334455666666666789999999999999999999 56664332211 1233332 13445566
Q ss_pred HHHHHH
Q 003909 735 AAVAEG 740 (787)
Q Consensus 735 ~~i~~g 740 (787)
+++...
T Consensus 196 dll~~v 201 (209)
T d2o2xa1 196 DLLAAI 201 (209)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655443
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.44 E-value=0.0021 Score=60.14 Aligned_cols=109 Identities=11% Similarity=0.116 Sum_probs=73.5
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCC----HHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDN----KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~----~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
.+.|++.+.+++|+++|++++++|+.. ...........|+..+. +.++...+... .
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f----d~i~~s~~~~~----------------~ 156 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF----DFLIESCQVGM----------------I 156 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC----SEEEEHHHHSC----------------C
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhh----ceeeehhhccC----------------C
Confidence 467999999999999999999999643 33344455566665432 11111111110 0
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCCccHHHHhh
Q 003909 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGSGTAVAKSA 720 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~~~~~~~~~ 720 (787)
.-.|+--...++.++-..+.++||||..+|+.+-+.||+ +|.+.++.+...+.
T Consensus 157 KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~el 210 (222)
T d1cr6a1 157 KPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALREL 210 (222)
T ss_dssp TTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHHH
T ss_pred CCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHHH
Confidence 133555566777777778889999999999999999998 66676666555443
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=96.32 E-value=0.0022 Score=60.02 Aligned_cols=122 Identities=10% Similarity=0.173 Sum_probs=84.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.+++.++++.+++.|+++.++|+-.........+..++..... .++...+.... .-.|
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd----~~~~s~~~~~~----------------KP~p 152 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD----HLLSVDPVQVY----------------KPDN 152 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEESGGGTCC----------------TTSH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccccccc----ceeeeeeeecc----------------ccHH
Confidence 456889999999999999999999999999999999888765431 12222111111 1223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCceEe-cC---CccHHHHhhcCeeccCCCchHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-MG---SGTAVAKSASDMVLADDNFATIVA 735 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vgia-~~---~~~~~~~~~ad~v~~~~~~~~i~~ 735 (787)
+-=..+++.+.-..+.+++|||+.+|+.+-+.||+-.+ +. ...+.....+|+++.+ +..+.+
T Consensus 153 ~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~--l~el~~ 218 (220)
T d1zrna_ 153 RVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS--LRAVVE 218 (220)
T ss_dssp HHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS--HHHHHT
T ss_pred HHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECC--HHHHHh
Confidence 44455666676677889999999999999999998644 42 2233344457888743 555543
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=96.30 E-value=0.0025 Score=61.32 Aligned_cols=57 Identities=23% Similarity=0.256 Sum_probs=39.5
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCcc-CHHHHhhCCc-eEecCCc---cHHHHhh---cCeeccC
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVN-DAPALKKADI-GIAMGSG---TAVAKSA---SDMVLAD 727 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~N-D~~ml~~A~v-gia~~~~---~~~~~~~---ad~v~~~ 727 (787)
|.--..+++.+....+.++||||+.+ |+.+-++||+ +|.+..| .+.+... .|+++.+
T Consensus 183 p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~s 247 (253)
T d1wvia_ 183 AVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSS 247 (253)
T ss_dssp HHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESC
T ss_pred cccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECC
Confidence 34445666677667789999999976 9999999999 7777432 2223333 3888754
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=96.29 E-value=0.0014 Score=59.65 Aligned_cols=89 Identities=17% Similarity=0.279 Sum_probs=61.8
Q ss_pred CChhHHHHHHHHHhCCCEEEEEcCCCHH----HHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEe
Q 003909 593 PREEVKNAMLSCMTAGIRVIVVTGDNKS----TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (787)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~i~TGd~~~----~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 668 (787)
+.|++++.++.++++|++++.+|||... ++..+.+.+|+..... ... ++..
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~--~~v-----------------------ll~~ 141 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNM--NPV-----------------------IFAG 141 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTB--CCC-----------------------EECC
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccc--cce-----------------------EeeC
Confidence 5689999999999999999999999754 4455556688854210 001 2222
Q ss_pred cC--hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEec
Q 003909 669 VE--PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAM 710 (787)
Q Consensus 669 ~~--p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~ 710 (787)
.. ...|...++. .+.++++||..+|+.+-.+||+ +|-+
T Consensus 142 ~~~~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 142 DKPGQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp CCTTCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CCCCchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceEe
Confidence 11 1234555542 4588999999999999999996 6654
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=96.15 E-value=0.001 Score=59.00 Aligned_cols=103 Identities=15% Similarity=0.159 Sum_probs=57.6
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCC--------HHH-------HHHHHHHhCCCCCccccccccccchhhccCChHHH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDN--------KST-------AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQ 656 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~--------~~~-------a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (787)
++-|++.++|+.|+++|++++++|..+ ... ........|+....+... .....+...
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~-~~~~~~~~~------- 101 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLIC-PHLPADECD------- 101 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEE-CCCGGGCCS-------
T ss_pred eECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccceeeec-ccccccccc-------
Confidence 467899999999999999999999754 111 122233333322100000 000000000
Q ss_pred HHhhccceEEEecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecC
Q 003909 657 TVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMG 711 (787)
Q Consensus 657 ~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~ 711 (787)
+..-.|.-=.++++.+.-..+.++||||...|+.|-+.||+ +|.++
T Consensus 102 ---------~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~ 148 (161)
T d2fpwa1 102 ---------CRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYD 148 (161)
T ss_dssp ---------SSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred ---------ccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEEC
Confidence 00122333344555555566789999999999999999999 44554
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.05 E-value=0.0076 Score=56.21 Aligned_cols=125 Identities=14% Similarity=0.166 Sum_probs=80.8
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
.+.+++.+.+++|+. +..++|+.....+....+++|+...... .+...+...... +...|
T Consensus 85 ~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~---~~~~~~~~~~~~--------------~KP~~ 144 (222)
T d2fdra1 85 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAP---HIYSAKDLGADR--------------VKPKP 144 (222)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTT---CEEEHHHHCTTC--------------CTTSS
T ss_pred chhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccce---eecccccccccc--------------cccCH
Confidence 467788888877754 5579999999999999999999875321 111111110000 01223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce-EecCCcc-------HHHHh-hcCeeccCCCchHHHHHHH
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMGSGT-------AVAKS-ASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg-ia~~~~~-------~~~~~-~ad~v~~~~~~~~i~~~i~ 738 (787)
+.=....+.+.-..+.+++|||+.+|+.+-+.||+- |.+.++. +...+ -||+++.+ +..+..++.
T Consensus 145 ~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~--l~eL~~ll~ 218 (222)
T d2fdra1 145 DIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISR--MQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHHH
T ss_pred HHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECC--HHHHHHHHH
Confidence 333556666666678899999999999999999983 4554332 22232 48999865 666666653
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.04 E-value=0.001 Score=62.33 Aligned_cols=105 Identities=11% Similarity=0.080 Sum_probs=66.4
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHH----HHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEE
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESI----CHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~----a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (787)
.+.+++.+++++|+++|++++++|+......... -...++..+. ..++...+...-
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~f----d~i~~s~~~~~~---------------- 158 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHF----DFLIESCQVGMV---------------- 158 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTS----SEEEEHHHHTCC----------------
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhc----cEEEeccccccc----------------
Confidence 4679999999999999999999997654433222 2223332221 111111111100
Q ss_pred ecChhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCCccHH
Q 003909 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGSGTAV 716 (787)
Q Consensus 668 ~~~p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~~~~~ 716 (787)
.-.|+-=..+++.+.-..+.+++|||+..|+.+-+.||+ +|.+.++...
T Consensus 159 KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~~ 208 (225)
T d1zd3a1 159 KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTA 208 (225)
T ss_dssp TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHHHH
T ss_pred hhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCcchh
Confidence 123344455666666666788999999999999999999 7777655433
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.97 E-value=0.0071 Score=54.95 Aligned_cols=142 Identities=13% Similarity=0.166 Sum_probs=88.0
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc-----chhhc----------cCChHHH
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT-----ASEFE----------ELPAMQQ 656 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~-----~~~~~----------~~~~~~~ 656 (787)
.+-|++.++++.+++. ...+++|-.-.+-+.++|+.+|+... ..+....++ ..+.+ +...+++
T Consensus 81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel 158 (308)
T d1y8aa1 81 KFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGE-LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEEL 158 (308)
T ss_dssp CBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSE-EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_pred eecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCce-eecccccccccCCChHHHHHHHHHhhhccCccHHHH
Confidence 4678999999999988 67777777778889999999999632 111111111 00000 0000111
Q ss_pred H-------------HhhccceEEEecChhhHHHHHHHHhhC--CCEEEEEcCCccCHHHHhhCCc--eEecC-CccHHHH
Q 003909 657 T-------------VALQHMALFTRVEPSHKRMLVEALQNQ--NEVVAMTGDGVNDAPALKKADI--GIAMG-SGTAVAK 718 (787)
Q Consensus 657 ~-------------~~~~~~~v~~~~~p~~K~~~v~~l~~~--~~~v~~vGDg~ND~~ml~~A~v--gia~~-~~~~~~~ 718 (787)
. ..+..+.. +-...|..+++..... -...+.|||+..|..||+.|.= |+|++ ||.+.+.
T Consensus 159 ~e~~d~~f~~~e~~~i~e~Vk~---VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal 235 (308)
T d1y8aa1 159 FRKLDELFSRSEVRKIVESVKA---VGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYAL 235 (308)
T ss_dssp HHHHHHHHHSHHHHHHHHTCBC---CCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHH
T ss_pred HHHHHHHhccchHhhHHhhhcc---cCCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccccc
Confidence 0 01111111 1224555555444322 2234788999999999998843 66666 8999999
Q ss_pred hhcCeeccCCCchHHHHHHH
Q 003909 719 SASDMVLADDNFATIVAAVA 738 (787)
Q Consensus 719 ~~ad~v~~~~~~~~i~~~i~ 738 (787)
..||+.+.+.+...++.+++
T Consensus 236 ~eA~VaiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 236 KHADVVIISPTAMSEAKVIE 255 (308)
T ss_dssp TTCSEEEECSSTHHHHHHHH
T ss_pred cccceEEeccchhHHHHHHH
Confidence 99999998888777776664
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=95.50 E-value=0.03 Score=52.73 Aligned_cols=94 Identities=10% Similarity=0.137 Sum_probs=67.9
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhccCChHHHHHhhccceEEEecCh
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 671 (787)
++.+++.+++++|+ ++.+.++|..+...+....+..|+.... +.++..++....+ -.|
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f----d~v~~s~~~~~~K----------------P~p 150 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF----DAVISVDAKRVFK----------------PHP 150 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEEGGGGTCCT----------------TSH
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccc----ccccccccccccC----------------ccH
Confidence 46688899999885 6789999999999999999999887643 2222222221111 223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCce
Q 003909 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG 707 (787)
Q Consensus 672 ~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~vg 707 (787)
+-=..+++.+.-..+.+++|||+.+|+.+-+.||+.
T Consensus 151 ~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~ 186 (245)
T d1qq5a_ 151 DSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFS 186 (245)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCe
Confidence 333456677766677899999999999999999984
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=95.28 E-value=0.041 Score=46.58 Aligned_cols=106 Identities=12% Similarity=0.237 Sum_probs=65.7
Q ss_pred cChhHHHHHHHHHHcCCCCCCCchhhhhhhhhhccccccCccccccccEeEeecCCCCCceEEEEEeeCCeeEEEEeCCh
Q 003909 435 GEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAP 514 (787)
Q Consensus 435 ~~~~~~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~sviv~~~~~~~~~~kG~~ 514 (787)
.||..+|++.+|++.+...... ..+......+|....+...+.+ ++ ..+..|++
T Consensus 30 eHPlakAIv~~Ak~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~g~~~--~g--~~v~~G~~ 83 (136)
T d2a29a1 30 ETPEGRSIVILAKQRFNLRERD----------------------VQSLHATFVPFTAQSRMSGINI--DN--RMIRKGSV 83 (136)
T ss_dssp CSHHHHHHHHHHHHHHCCCCCC----------------------TTTTTCEEEEEETTTTEEEEEE--TT--EEEEEECH
T ss_pred CchHHHHHHHHHHHhcCCCccc----------------------cccccccccccccccceEEEEE--CC--EEEEecHH
Confidence 4899999999998876433110 1112223345555554443322 22 45678999
Q ss_pred HHHHHhcccccccCCCccccCCHHHHHHHHHHHHHhhccccchhhhhhhccCCccccCCCCCCCCCcEEEEEeccCCCCC
Q 003909 515 ESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPR 594 (787)
Q Consensus 515 e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~~ 594 (787)
..+.+.... .|. .++ ..+.+..+++.. +|..++.+| .|.+++|++++.|+++
T Consensus 84 ~~~~~~~~~-----~g~--~~~----~~~~~~~~~~~~-~G~Tvv~Va----------------~d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 84 DAIRRHVEA-----NGG--HFP----TDVDQKVDQVAR-QGATPLVVV----------------EGSRVLGVIALKDIVK 135 (136)
T ss_dssp HHHHHHHHH-----HTC--CCC----HHHHHHHHHHHH-TTSEEEEEE----------------ETTEEEEEEEEEESSC
T ss_pred HHHHHHHHH-----cCC--CCc----HHHHHHHHHHHH-CCCeEEEEE----------------ECCEEEEEEEEEeecC
Confidence 877654422 111 122 234555666776 999888887 4779999999999986
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=94.12 E-value=0.0056 Score=55.43 Aligned_cols=103 Identities=17% Similarity=0.156 Sum_probs=64.1
Q ss_pred CCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHHh-CCCCCccccccccccchhhccCChHHHHHhhccceEEEecC
Q 003909 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI-GAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (787)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~~a~~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 670 (787)
++.+++.+.+..++..|+++.++|+.+...+.....+. |+.... ..++..+.... ....
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~f----d~v~~s~~~~~----------------~Kp~ 143 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAA----DHIYLSQDLGM----------------RKPE 143 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHC----SEEEEHHHHTC----------------CTTC
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhc----cceeecccccc----------------cccc
Confidence 46789999999999999999999987655443322221 221110 00111111000 0122
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCHHHHhhCCc-eEecCCcc
Q 003909 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGSGT 714 (787)
Q Consensus 671 p~~K~~~v~~l~~~~~~v~~vGDg~ND~~ml~~A~v-gia~~~~~ 714 (787)
|+-=..+++.+.-..+.+++|||+.+|+.+-+.||+ +|.+.+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 144 ARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 188 (197)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred hHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 333345556666567789999999999999999998 77776544
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=82.80 E-value=0.72 Score=37.46 Aligned_cols=42 Identities=10% Similarity=0.018 Sum_probs=32.9
Q ss_pred CCCChhHHHHHHHHHhCCCEEEEEcCCCHHHHHH---HHHHhCCC
Q 003909 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAES---ICHKIGAF 632 (787)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~---~a~~~gi~ 632 (787)
.++.+++.+.|++|++.|+++++.|+|....-.. -.++-|+.
T Consensus 20 ~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~ 64 (122)
T d2obba1 20 GEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 64 (122)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred ccccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC
Confidence 3578899999999999999999999998765433 34444554
|