Citrus Sinensis ID: 003929
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 786 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SJ22 | 1088 | Probable cellulose syntha | yes | no | 0.978 | 0.706 | 0.756 | 0.0 | |
| Q94JQ6 | 1084 | Cellulose synthase A cata | no | no | 0.975 | 0.707 | 0.760 | 0.0 | |
| O48947 | 1084 | Cellulose synthase A cata | no | no | 0.978 | 0.709 | 0.764 | 0.0 | |
| Q8L778 | 1069 | Cellulose synthase A cata | no | no | 0.960 | 0.706 | 0.761 | 0.0 | |
| Q69V23 | 1093 | Probable cellulose syntha | yes | no | 0.980 | 0.705 | 0.692 | 0.0 | |
| Q851L8 | 1092 | Probable cellulose syntha | yes | no | 0.979 | 0.705 | 0.692 | 0.0 | |
| A2XNT2 | 1092 | Probable cellulose syntha | N/A | no | 0.979 | 0.705 | 0.692 | 0.0 | |
| Q6YVM4 | 1092 | Probable cellulose syntha | no | no | 0.972 | 0.699 | 0.686 | 0.0 | |
| Q69P51 | 1055 | Cellulose synthase A cata | no | no | 0.919 | 0.685 | 0.633 | 0.0 | |
| A2Z1C8 | 1055 | Cellulose synthase A cata | N/A | no | 0.919 | 0.685 | 0.633 | 0.0 |
| >sp|Q9SJ22|CESA9_ARATH Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1 | Back alignment and function desciption |
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Score = 1211 bits (3133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/791 (75%), Positives = 672/791 (84%), Gaps = 22/791 (2%)
Query: 1 MATNGRLVAGSHNRNEFVLINADEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNE 60
M T GRL+AGSHNRNEFVLINAD+ AR+ S +ELSGQ C+IC DEIE+TDNGEPF+ACNE
Sbjct: 1 MNTGGRLIAGSHNRNEFVLINADDTARIRSAEELSGQTCKICRDEIELTDNGEPFIACNE 60
Query: 61 CAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVDGDEEEDDTDDLENEFDINDRKD 120
CAFP CRPCYEYERREGNQACPQC TRYKRIKGSPRV+GDEE+DD DDLE+EF D
Sbjct: 61 CAFPTCRPCYEYERREGNQACPQCGTRYKRIKGSPRVEGDEEDDDIDDLEHEFY---GMD 117
Query: 121 PHHIAEAMLS-SRLNIGRGSQAYVSGITTPSEVDSVSVAQEIPLLTYGNEDVGISSDKHA 179
P H+ EA L RLN GRG+ S + S S E+PLLTY +ED + SD+HA
Sbjct: 118 PEHVTEAALYYMRLNTGRGTDEV-------SHLYSASPGSEVPLLTYCDEDSDMYSDRHA 170
Query: 180 LIIPPFMGRGKRIHPMSFPDGFMTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEK 239
LI+PP G G R+H + F D F ++ RPM P+KDL VYGYG+VAWK+RME WKK+Q EK
Sbjct: 171 LIVPPSTGLGNRVHHVPFTDSFASIHTRPMVPQKDLTVYGYGSVAWKDRMEVWKKQQIEK 230
Query: 240 LQVVKHQGGNGGGNNDGDG-----VDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILL 294
LQVVK++ N G DGDG +DDP LPMMDEGRQPLSRKLPI SS+I+PYR++I
Sbjct: 231 LQVVKNERVNDG---DGDGFIVDELDDPGLPMMDEGRQPLSRKLPIRSSRINPYRMLIFC 287
Query: 295 RLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSL 354
RL ILGLFFHYRILHPVNDA+GLWLTSVICEIWFAVSWILDQFPKW PI RETYLDRLSL
Sbjct: 288 RLAILGLFFHYRILHPVNDAFGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSL 347
Query: 355 RYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAML 414
RYEKEGKPS+LA +D+FVSTVDP+KEPPLITANTVLSILAVDYPV+KVACYVSDDGAAML
Sbjct: 348 RYEKEGKPSELAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAML 407
Query: 415 TFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYE 474
TFEALS T+EFARKWVPFCKKF IEPRAPEWYF+QK+DYLK KV+P+F+ ERRAMKR+YE
Sbjct: 408 TFEALSYTAEFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKHKVDPAFVMERRAMKRDYE 467
Query: 475 EFKVRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPR 534
EFKV+IN LV+++QKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLG +GV D++GN LPR
Sbjct: 468 EFKVKINALVSVSQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVCDMDGNELPR 527
Query: 535 LVYVSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMM 594
LVYVSREKRPGFDHHKKAGAMN+LIRVSAV+SNAPYLLNVDCDHYINNSKA+REAMCFMM
Sbjct: 528 LVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKAIREAMCFMM 587
Query: 595 DPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQA 654
DP SGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQA
Sbjct: 588 DPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQA 647
Query: 655 LYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSK---KGKSNKKNKDTSKQIYALENIE 711
LYG+DAP KK+PP +TCNC PKWCC CC RKK K KK K+TSKQI+ALE+IE
Sbjct: 648 LYGFDAPKKKQPPGRTCNCWPKWCCLCCGMRKKKTGKVKDNQRKKPKETSKQIHALEHIE 707
Query: 712 EGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCG 771
EG++ + E +S Q+K EKKFGQSPV +ASTL GGVP+ + ASLL E+I VISCG
Sbjct: 708 EGLQVTNAENNSETAQLKLEKKFGQSPVLVASTLLLNGGVPSNVNPASLLRESIQVISCG 767
Query: 772 YEDKTDWGKEV 782
YE+KT+WGKE+
Sbjct: 768 YEEKTEWGKEI 778
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Probable catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 2 |
| >sp|Q94JQ6|CESA6_ARATH Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2 | Back alignment and function description |
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| >sp|O48947|CESA2_ARATH Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q8L778|CESA5_ARATH Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q69V23|CESA3_ORYSJ Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q851L8|CESA5_ORYSJ Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2XNT2|CESA5_ORYSI Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6YVM4|CESA6_ORYSJ Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q69P51|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2Z1C8|CESA9_ORYSI Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 786 | ||||||
| 255566630 | 1095 | Cellulose synthase A catalytic subunit 6 | 0.983 | 0.705 | 0.854 | 0.0 | |
| 224082476 | 1095 | predicted protein [Populus trichocarpa] | 0.992 | 0.712 | 0.875 | 0.0 | |
| 429326440 | 1093 | cellulose synthase [Populus tomentosa] | 0.992 | 0.713 | 0.867 | 0.0 | |
| 224066625 | 1093 | cellulose synthase [Populus trichocarpa] | 0.992 | 0.713 | 0.879 | 0.0 | |
| 225460638 | 1096 | PREDICTED: cellulose synthase A catalyti | 0.992 | 0.711 | 0.866 | 0.0 | |
| 296081195 | 1067 | unnamed protein product [Vitis vinifera] | 0.992 | 0.731 | 0.866 | 0.0 | |
| 376315432 | 1090 | CESA9 [Gossypium hirsutum] | 0.987 | 0.711 | 0.852 | 0.0 | |
| 356535774 | 1095 | PREDICTED: cellulose synthase A catalyti | 0.992 | 0.712 | 0.841 | 0.0 | |
| 429326442 | 1097 | cellulose synthase [Populus tomentosa] | 0.992 | 0.711 | 0.863 | 0.0 | |
| 47078494 | 1095 | cellulose synthase [Populus tremula x Po | 0.992 | 0.712 | 0.866 | 0.0 |
| >gi|255566630|ref|XP_002524299.1| Cellulose synthase A catalytic subunit 6 [UDP-forming], putative [Ricinus communis] gi|223536390|gb|EEF38039.1| Cellulose synthase A catalytic subunit 6 [UDP-forming], putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1357 bits (3511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/795 (85%), Positives = 724/795 (91%), Gaps = 22/795 (2%)
Query: 1 MATNGRLVAGSHNRNEFVLINADEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNE 60
M T GRL+AGSHNRNEFVLINADE+ARVTSVKELSGQICQICGDEIEIT +GEPFVACNE
Sbjct: 1 METKGRLIAGSHNRNEFVLINADEIARVTSVKELSGQICQICGDEIEITVDGEPFVACNE 60
Query: 61 CAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVDGDEEEDDTDDLENEFDINDRKD 120
CAFPVCRPCYEYERREGN+ACPQCKT YKRIKGSPRV+GDEEE+DTDDLENEFDI+ ++
Sbjct: 61 CAFPVCRPCYEYERREGNRACPQCKTIYKRIKGSPRVEGDEEEEDTDDLENEFDISASQN 120
Query: 121 PHHIAEAMLSSRLNIGRGSQAYVSGITTPSEVDSVSVAQEIPLLTYGNEDVGISSDKHAL 180
IAEA+ S+ LNI SQ VSG P E+DSV + EIPLLTY EDVGISSDKHAL
Sbjct: 121 ---IAEAIFSAHLNISTASQVNVSGFAAPPELDSVPIVSEIPLLTYHEEDVGISSDKHAL 177
Query: 181 IIPPFMGRGKRIHPMSFPDGFMTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEKL 240
I+PPF R KRIHPM FPD M+LPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQ+EKL
Sbjct: 178 IVPPF--RAKRIHPMPFPDSSMSLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQHEKL 235
Query: 241 QVVKHQGGNGGGNNDGDGVDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILLRLVILG 300
QVVKHQGGN NDG+ +DDPDLPMMDEGRQPLSRKLPISSSKISPYRLII+LRLVILG
Sbjct: 236 QVVKHQGGN----NDGNEIDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIIILRLVILG 291
Query: 301 LFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEG 360
LFFHYR+LHPVNDAYGLWLTS +CEIWFAVSWI DQ PKW PI RETYLDRLSLRYEK+G
Sbjct: 292 LFFHYRLLHPVNDAYGLWLTSTVCEIWFAVSWIFDQLPKWYPIERETYLDRLSLRYEKDG 351
Query: 361 KPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALS 420
KPS+LA IDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALS
Sbjct: 352 KPSELAAIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALS 411
Query: 421 ETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVRI 480
ETSEFARKWVPFCKK+KIEPRAPEWYF +K+DYLKDKV+PSFIRERRAMKREYEEF+VRI
Sbjct: 412 ETSEFARKWVPFCKKYKIEPRAPEWYFGEKVDYLKDKVDPSFIRERRAMKREYEEFRVRI 471
Query: 481 NGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSR 540
NGLV+ AQKVPE+GWTMQDGTPWPGNNVRDHPGMIQVFLGQ+GV D+EGN LP LVYVSR
Sbjct: 472 NGLVSTAQKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGQHGVHDVEGNQLPCLVYVSR 531
Query: 541 EKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGK 600
EKRPGFDHHKKAGAMNAL+RVSA+ISNAPYLLNVDCDHYINNSKALR+AMCFMMDPTSGK
Sbjct: 532 EKRPGFDHHKKAGAMNALVRVSAIISNAPYLLNVDCDHYINNSKALRDAMCFMMDPTSGK 591
Query: 601 KICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDA 660
KICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDA
Sbjct: 592 KICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDA 651
Query: 661 PVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKS-------------NKKNKDTSKQIYAL 707
P+KKKPP KTCNC PKWCC CCRSRKK+KKGKS KKN++ SKQIYAL
Sbjct: 652 PIKKKPPGKTCNCWPKWCCFCCRSRKKNKKGKSAEKKNREASKQMHAKKNREASKQIYAL 711
Query: 708 ENIEEGIEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHV 767
ENIEEGIEG+DNEKS LMPQIKFEKKFGQS VFIASTL E GG+P GA++ASLL EAIHV
Sbjct: 712 ENIEEGIEGVDNEKSELMPQIKFEKKFGQSAVFIASTLMEEGGIPKGATSASLLKEAIHV 771
Query: 768 ISCGYEDKTDWGKEV 782
ISCGYEDK++WGKEV
Sbjct: 772 ISCGYEDKSEWGKEV 786
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|224082476|ref|XP_002306707.1| predicted protein [Populus trichocarpa] gi|222856156|gb|EEE93703.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|429326440|gb|AFZ78560.1| cellulose synthase [Populus tomentosa] | Back alignment and taxonomy information |
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| >gi|224066625|ref|XP_002302169.1| cellulose synthase [Populus trichocarpa] gi|222843895|gb|EEE81442.1| cellulose synthase [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225460638|ref|XP_002265955.1| PREDICTED: cellulose synthase A catalytic subunit 6 [UDP-forming] [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296081195|emb|CBI18221.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|376315432|gb|AFB18639.1| CESA9 [Gossypium hirsutum] | Back alignment and taxonomy information |
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| >gi|356535774|ref|XP_003536418.1| PREDICTED: cellulose synthase A catalytic subunit 6 [UDP-forming]-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|429326442|gb|AFZ78561.1| cellulose synthase [Populus tomentosa] | Back alignment and taxonomy information |
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| >gi|47078494|gb|AAT09895.1| cellulose synthase [Populus tremula x Populus tremuloides] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 786 | ||||||
| TAIR|locus:2136308 | 1084 | CESA2 "cellulose synthase A2" | 0.829 | 0.601 | 0.756 | 1.4e-300 | |
| TAIR|locus:2052576 | 1088 | CESA9 "cellulose synthase A9" | 0.835 | 0.603 | 0.746 | 5.7e-297 | |
| TAIR|locus:2176090 | 1084 | CESA6 "cellulose synthase 6" [ | 0.830 | 0.602 | 0.752 | 3.1e-296 | |
| TAIR|locus:2178193 | 1069 | CESA5 "cellulose synthase 5" [ | 0.651 | 0.478 | 0.790 | 7.3e-295 | |
| TAIR|locus:2127776 | 1081 | CESA1 "cellulose synthase 1" [ | 0.815 | 0.592 | 0.607 | 4.3e-239 | |
| TAIR|locus:2178935 | 1026 | IRX3 "IRREGULAR XYLEM 3" [Arab | 0.545 | 0.418 | 0.704 | 1.9e-238 | |
| TAIR|locus:2040080 | 1065 | CESA10 "cellulose synthase 10" | 0.629 | 0.464 | 0.659 | 2.2e-233 | |
| TAIR|locus:2156789 | 1065 | CEV1 "CONSTITUTIVE EXPRESSION | 0.788 | 0.582 | 0.607 | 1.1e-229 | |
| TAIR|locus:2172457 | 1049 | CESA4 "cellulose synthase A4" | 0.559 | 0.419 | 0.689 | 6.9e-224 | |
| TAIR|locus:2124167 | 985 | IRX1 "IRREGULAR XYLEM 1" [Arab | 0.567 | 0.452 | 0.676 | 1.4e-208 |
| TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2691 (952.3 bits), Expect = 1.4e-300, Sum P(2) = 1.4e-300
Identities = 507/670 (75%), Positives = 555/670 (82%)
Query: 1 MATNGRLVAGSHNRNEFVLINADEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNE 60
M T GRL+AGSHNRNEFVLINADE AR+ SV+ELSGQ CQICGDEIE+T + E FVACNE
Sbjct: 1 MNTGGRLIAGSHNRNEFVLINADESARIRSVQELSGQTCQICGDEIELTVSSELFVACNE 60
Query: 61 CAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVXXXXXXXXXXXXXXXXXINDRKD 120
CAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRV + D
Sbjct: 61 CAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVDGDDEEEEDIDDLEYE-FDHGMD 119
Query: 121 PHHIAEAMLSSRLNIGRGSQAYVSGITTPSEVDSVSVAQEIPLLTYGNEDVGISSDKHAL 180
P H AEA LSSRLN GRG +DS +IPLLTY +ED + SD+HAL
Sbjct: 120 PEHAAEAALSSRLNTGRGG------------LDSAPPGSQIPLLTYCDEDADMYSDRHAL 167
Query: 181 IIPPFMGRGKRIHPMSFPDGFMTLPP--RPMDPKKDLAVYGYGTVAWKERMEEWKKKQNE 238
I+PP G G R++P F D + PP R M P+KD+A YGYG+VAWK+RME WK++Q E
Sbjct: 168 IVPPSTGYGNRVYPAPFTDS--SAPPQARSMVPQKDIAEYGYGSVAWKDRMEVWKRRQGE 225
Query: 239 KLQVVKHQXXXXXXXXXXXXXXX-PDLPMMDEGRQPLSRKLPISSSKISPYXXXXXXXXX 297
KLQV+KH+ PD+PMMDEGRQPLSRKLPI SS+I+PY
Sbjct: 226 KLQVIKHEGGNNGRGSNDDDELDDPDMPMMDEGRQPLSRKLPIRSSRINPYRMLILCRLA 285
Query: 298 XXXXFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYE 357
FFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKW PI RETYLDRLSLRYE
Sbjct: 286 ILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYE 345
Query: 358 KEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFE 417
KEGKPS LA +D+FVSTVDP+KEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFE
Sbjct: 346 KEGKPSGLAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFE 405
Query: 418 ALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFK 477
ALS+T+EFARKWVPFCKKF IEPRAPEWYF+QK+DYLK+KV+P+F+RERRAMKR+YEEFK
Sbjct: 406 ALSDTAEFARKWVPFCKKFNIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKRDYEEFK 465
Query: 478 VRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVY 537
V+IN LVA AQKVPE+GWTMQDGTPWPGNNVRDHPGMIQVFLG +GVRD +GN LPRLVY
Sbjct: 466 VKINALVATAQKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVRDTDGNELPRLVY 525
Query: 538 VSREKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPT 597
VSREKRPGFDHHKKAGAMN+LIRVSAV+SNAPYLLNVDCDHYINNSKA+RE+MCFMMDP
Sbjct: 526 VSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKAIRESMCFMMDPQ 585
Query: 598 SGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYG 657
SGKK+CYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYG
Sbjct: 586 SGKKVCYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYG 645
Query: 658 YDAPVKKKPP 667
+DAP KKKPP
Sbjct: 646 FDAPKKKKPP 655
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| TAIR|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q851L8 | CESA5_ORYSJ | 2, ., 4, ., 1, ., 1, 2 | 0.6926 | 0.9796 | 0.7051 | yes | no |
| Q9SJ22 | CESA9_ARATH | 2, ., 4, ., 1, ., 1, 2 | 0.7560 | 0.9783 | 0.7068 | yes | no |
| Q69V23 | CESA3_ORYSJ | 2, ., 4, ., 1, ., 1, 2 | 0.6926 | 0.9809 | 0.7053 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.963 |
| 4th Layer | 2.4.1.12 | 0.946 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 786 | |||
| PLN02436 | 1094 | PLN02436, PLN02436, cellulose synthase A | 0.0 | |
| PLN02400 | 1085 | PLN02400, PLN02400, cellulose synthase | 0.0 | |
| PLN02638 | 1079 | PLN02638, PLN02638, cellulose synthase A (UDP-form | 0.0 | |
| PLN02189 | 1040 | PLN02189, PLN02189, cellulose synthase | 0.0 | |
| PLN02915 | 1044 | PLN02915, PLN02915, cellulose synthase A [UDP-form | 0.0 | |
| PLN02195 | 977 | PLN02195, PLN02195, cellulose synthase A | 0.0 | |
| pfam03552 | 716 | pfam03552, Cellulose_synt, Cellulose synthase | 0.0 | |
| PLN02248 | 1135 | PLN02248, PLN02248, cellulose synthase-like protei | 0.0 | |
| PLN02893 | 734 | PLN02893, PLN02893, Cellulose synthase-like protei | 1e-97 | |
| PLN02190 | 756 | PLN02190, PLN02190, cellulose synthase-like protei | 2e-95 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 1e-14 | |
| PLN02195 | 977 | PLN02195, PLN02195, cellulose synthase A | 6e-13 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 2e-06 | |
| cd06423 | 180 | cd06423, CESA_like, CESA_like is the cellulose syn | 2e-05 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 9e-05 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 1e-04 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 2e-04 | |
| pfam14446 | 55 | pfam14446, Prok-RING_1, Prokaryotic RING finger fa | 3e-04 | |
| cd06435 | 236 | cd06435, CESA_NdvC_like, NdvC_like proteins in thi | 4e-04 | |
| COG5175 | 480 | COG5175, MOT2, Transcriptional repressor [Transcri | 4e-04 |
| >gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A | Back alignment and domain information |
|---|
Score = 1649 bits (4273), Expect = 0.0
Identities = 671/787 (85%), Positives = 716/787 (90%), Gaps = 7/787 (0%)
Query: 1 MATNGRLVAGSHNRNEFVLINADEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNE 60
M T GRL+AGSHNRNEFVLINADE+AR+ SV+ELSGQ CQICGDEIE+T +GEPFVACNE
Sbjct: 1 MNTGGRLIAGSHNRNEFVLINADEIARIRSVQELSGQTCQICGDEIELTVDGEPFVACNE 60
Query: 61 CAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVDGDEEEDDTDDLENEFDI-NDRK 119
CAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRV+GDEEEDD DDLENEFD N+
Sbjct: 61 CAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVEGDEEEDDIDDLENEFDYGNNGL 120
Query: 120 DPHHIAEAMLSSRLNIGRGSQAYVSGITTPSEVDSVSVAQEIPLLTYGNEDVGISSDKHA 179
DP +AEAMLSSRLN GR S VSGI TPSE+DS +IPLLTYG EDV ISSD+HA
Sbjct: 121 DPEQVAEAMLSSRLNTGRHSN--VSGIATPSELDSAPPGSQIPLLTYGEEDVEISSDRHA 178
Query: 180 LIIPPFMGRGKRIHPMSFPDGFMTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQNEK 239
LI+PP G G R+HPM FPD +L PRPM P+KDLAVYGYG+VAWK+RMEEWKKKQNEK
Sbjct: 179 LIVPPSTGHGNRVHPMPFPDSSASLQPRPMVPQKDLAVYGYGSVAWKDRMEEWKKKQNEK 238
Query: 240 LQVVKHQGGNGGGNNDGDGVDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILLRLVIL 299
LQVVKH+GGN GGNNDGD +DDPDLPMMDEGRQPLSRKLPI SSKI+PYR+II+LRLVIL
Sbjct: 239 LQVVKHEGGNDGGNNDGDELDDPDLPMMDEGRQPLSRKLPIPSSKINPYRMIIILRLVIL 298
Query: 300 GLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKE 359
GLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKW PI RETYLDRLSLRYEKE
Sbjct: 299 GLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKE 358
Query: 360 GKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEAL 419
GKPS+LA +D+FVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEAL
Sbjct: 359 GKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEAL 418
Query: 420 SETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFKVR 479
SETSEFARKWVPFCKKF IEPRAPEWYF+QK+DYLK+KV+P+F+RERRAMKREYEEFKV+
Sbjct: 419 SETSEFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVK 478
Query: 480 INGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVS 539
IN LVA AQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLG +GVRD+EGN LPRLVYVS
Sbjct: 479 INALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVRDVEGNELPRLVYVS 538
Query: 540 REKRPGFDHHKKAGAMNALIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSG 599
REKRPGFDHHKKAGAMN+LIRVSAV+SNAPYLLNVDCDHYINNSKALREAMCFMMDP SG
Sbjct: 539 REKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSG 598
Query: 600 KKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYD 659
KKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYD
Sbjct: 599 KKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYD 658
Query: 660 APVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKS----NKKNKDTSKQIYALENIEEGIE 715
AP KKKPP KTCNC PKWCC CC SRKK KK KS KKN++ SKQI+ALENIEEGIE
Sbjct: 659 APKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIE 718
Query: 716 GIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDK 775
G +NEKSS PQ+K EKKFGQSPVF+ASTL E GGVP AS ASLL EAI VISCGYEDK
Sbjct: 719 GSNNEKSSETPQLKLEKKFGQSPVFVASTLLENGGVPRNASPASLLREAIQVISCGYEDK 778
Query: 776 TDWGKEV 782
T+WGKE+
Sbjct: 779 TEWGKEI 785
|
Length = 1094 |
| >gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|222758 pfam14446, Prok-RING_1, Prokaryotic RING finger family 1 | Back alignment and domain information |
|---|
| >gnl|CDD|133057 cd06435, CESA_NdvC_like, NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|227502 COG5175, MOT2, Transcriptional repressor [Transcription] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 786 | |||
| PLN02436 | 1094 | cellulose synthase A | 100.0 | |
| PLN02400 | 1085 | cellulose synthase | 100.0 | |
| PLN02638 | 1079 | cellulose synthase A (UDP-forming), catalytic subu | 100.0 | |
| PLN02189 | 1040 | cellulose synthase | 100.0 | |
| PLN02915 | 1044 | cellulose synthase A [UDP-forming], catalytic subu | 100.0 | |
| PLN02195 | 977 | cellulose synthase A | 100.0 | |
| PLN02248 | 1135 | cellulose synthase-like protein | 100.0 | |
| PLN02190 | 756 | cellulose synthase-like protein | 100.0 | |
| PF03552 | 720 | Cellulose_synt: Cellulose synthase; InterPro: IPR0 | 100.0 | |
| PLN02893 | 734 | Cellulose synthase-like protein | 100.0 | |
| PF14569 | 80 | zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A. | 100.0 | |
| TIGR03030 | 713 | CelA cellulose synthase catalytic subunit (UDP-for | 100.0 | |
| PRK11498 | 852 | bcsA cellulose synthase catalytic subunit; Provisi | 100.0 | |
| cd04191 | 254 | Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon | 99.87 | |
| PRK05454 | 691 | glucosyltransferase MdoH; Provisional | 99.84 | |
| COG1215 | 439 | Glycosyltransferases, probably involved in cell wa | 99.75 | |
| cd06421 | 234 | CESA_CelA_like CESA_CelA_like are involved in the | 99.62 | |
| PRK14583 | 444 | hmsR N-glycosyltransferase; Provisional | 99.61 | |
| cd06437 | 232 | CESA_CaSu_A2 Cellulose synthase catalytic subunit | 99.54 | |
| TIGR03111 | 439 | glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 | 99.48 | |
| PRK11204 | 420 | N-glycosyltransferase; Provisional | 99.47 | |
| cd06427 | 241 | CESA_like_2 CESA_like_2 is a member of the cellulo | 99.44 | |
| cd06435 | 236 | CESA_NdvC_like NdvC_like proteins in this family a | 99.43 | |
| PF13641 | 228 | Glyco_tranf_2_3: Glycosyltransferase like family 2 | 99.4 | |
| cd06436 | 191 | GlcNAc-1-P_transferase N-acetyl-glucosamine transf | 99.39 | |
| PRK14716 | 504 | bacteriophage N4 adsorption protein B; Provisional | 99.34 | |
| TIGR03472 | 373 | HpnI hopanoid biosynthesis associated glycosyl tra | 99.27 | |
| cd06438 | 183 | EpsO_like EpsO protein participates in the methano | 99.25 | |
| PRK11234 | 727 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.18 | |
| cd04192 | 229 | GT_2_like_e Subfamily of Glycosyltransferase Famil | 99.15 | |
| cd06434 | 235 | GT2_HAS Hyaluronan synthases catalyze polymerizati | 99.12 | |
| cd02520 | 196 | Glucosylceramide_synthase Glucosylceramide synthas | 99.09 | |
| cd06439 | 251 | CESA_like_1 CESA_like_1 is a member of the cellulo | 99.09 | |
| PF14570 | 48 | zf-RING_4: RING/Ubox like zinc-binding domain; PDB | 99.02 | |
| cd04190 | 244 | Chitin_synth_C C-terminal domain of Chitin Synthas | 99.02 | |
| TIGR03469 | 384 | HonB hopene-associated glycosyltransferase HpnB. T | 98.91 | |
| PRK15489 | 703 | nfrB bacteriophage N4 adsorption protein B; Provis | 98.89 | |
| cd06423 | 180 | CESA_like CESA_like is the cellulose synthase supe | 98.87 | |
| cd04184 | 202 | GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot | 98.84 | |
| cd04196 | 214 | GT_2_like_d Subfamily of Glycosyltransferase Famil | 98.82 | |
| PF00535 | 169 | Glycos_transf_2: Glycosyl transferase family 2; In | 98.81 | |
| cd04195 | 201 | GT2_AmsE_like GT2_AmsE_like is involved in exopoly | 98.8 | |
| cd02525 | 249 | Succinoglycan_BP_ExoA ExoA is involved in the bios | 98.76 | |
| cd06433 | 202 | GT_2_WfgS_like WfgS and WfeV are involved in O-ant | 98.62 | |
| cd06442 | 224 | DPM1_like DPM1_like represents putative enzymes si | 98.54 | |
| PLN02726 | 243 | dolichyl-phosphate beta-D-mannosyltransferase | 98.54 | |
| cd06420 | 182 | GT2_Chondriotin_Pol_N N-terminal domain of Chondro | 98.49 | |
| cd04179 | 185 | DPM_DPG-synthase_like DPM_DPG-synthase_like is a m | 98.48 | |
| cd04186 | 166 | GT_2_like_c Subfamily of Glycosyltransferase Famil | 98.44 | |
| cd02522 | 221 | GT_2_like_a GT_2_like_a represents a glycosyltrans | 98.37 | |
| cd02510 | 299 | pp-GalNAc-T pp-GalNAc-T initiates the formation of | 98.33 | |
| cd04185 | 202 | GT_2_like_b Subfamily of Glycosyltransferase Famil | 98.28 | |
| cd02526 | 237 | GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr | 98.28 | |
| cd04187 | 181 | DPM1_like_bac Bacterial DPM1_like enzymes are rela | 98.21 | |
| cd04188 | 211 | DPG_synthase DPG_synthase is involved in protein N | 98.0 | |
| cd06913 | 219 | beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran | 97.99 | |
| PRK10018 | 279 | putative glycosyl transferase; Provisional | 97.89 | |
| PTZ00260 | 333 | dolichyl-phosphate beta-glucosyltransferase; Provi | 97.85 | |
| PRK10073 | 328 | putative glycosyl transferase; Provisional | 97.84 | |
| cd00761 | 156 | Glyco_tranf_GTA_type Glycosyltransferase family A | 97.79 | |
| COG2943 | 736 | MdoH Membrane glycosyltransferase [Cell envelope b | 97.75 | |
| PF13632 | 193 | Glyco_trans_2_3: Glycosyl transferase family group | 97.64 | |
| TIGR01556 | 281 | rhamnosyltran L-rhamnosyltransferase. Rhamnolipids | 97.62 | |
| PRK13915 | 306 | putative glucosyl-3-phosphoglycerate synthase; Pro | 97.55 | |
| PF10111 | 281 | Glyco_tranf_2_2: Glycosyltransferase like family 2 | 97.18 | |
| PF13506 | 175 | Glyco_transf_21: Glycosyl transferase family 21 | 97.17 | |
| PRK10063 | 248 | putative glycosyl transferase; Provisional | 97.04 | |
| COG0463 | 291 | WcaA Glycosyltransferases involved in cell wall bi | 96.83 | |
| PRK10714 | 325 | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi | 96.77 | |
| COG5175 | 480 | MOT2 Transcriptional repressor [Transcription] | 96.66 | |
| cd02511 | 229 | Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 | 96.02 | |
| cd02514 | 334 | GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es | 95.72 | |
| PF14446 | 54 | Prok-RING_1: Prokaryotic RING finger family 1 | 95.57 | |
| COG1216 | 305 | Predicted glycosyltransferases [General function p | 95.47 | |
| TIGR00570 | 309 | cdk7 CDK-activating kinase assembly factor MAT1. A | 95.22 | |
| cd00162 | 45 | RING RING-finger (Really Interesting New Gene) dom | 89.18 | |
| PF05290 | 140 | Baculo_IE-1: Baculovirus immediate-early protein ( | 87.96 | |
| KOG2978 | 238 | consensus Dolichol-phosphate mannosyltransferase [ | 80.55 | |
| smart00504 | 63 | Ubox Modified RING finger domain. Modified RING fi | 80.01 |
| >PLN02436 cellulose synthase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-254 Score=2176.10 Aligned_cols=782 Identities=84% Similarity=1.393 Sum_probs=717.6
Q ss_pred CCCCCcccccccCCceEEEeecccccccccccccCCccccccCccccccCCCCceeecCCCCCCcchhhhHHHHhhCCCc
Q 003929 1 MATNGRLVAGSHNRNEFVLINADEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQA 80 (786)
Q Consensus 1 Me~~~~~~~g~~~r~~~~~~~~~~~~~~~~~~~~~~~~CqiCgd~Vg~~~~Ge~FvAC~eC~FpVCRpCYeyErkeG~q~ 80 (786)
||+++|||||||||||||+|+.|++.++||++++++|+||||||+||+|+|||+|||||||+|||||||||||||||||+
T Consensus 1 m~~~~~~~~gs~~r~e~~~~~~d~~~~~k~~~~~~~~iCqICGD~Vg~t~dGe~FVACn~C~fpvCr~Cyeyer~eg~~~ 80 (1094)
T PLN02436 1 MNTGGRLIAGSHNRNEFVLINADEIARIRSVQELSGQTCQICGDEIELTVDGEPFVACNECAFPVCRPCYEYERREGNQA 80 (1094)
T ss_pred CCcccccccccccccceeEeccccccCCCCccccCCccccccccccCcCCCCCEEEeeccCCCccccchhhhhhhcCCcc
Confidence 99999999999999999999999766678999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccccCCCCCCCCCCCCCccccccccccCC-CCCchhhhhhhhhhhcccCCCCCccccCccCCCccccccccC
Q 003929 81 CPQCKTRYKRIKGSPRVDGDEEEDDTDDLENEFDIND-RKDPHHIAEAMLSSRLNIGRGSQAYVSGITTPSEVDSVSVAQ 159 (786)
Q Consensus 81 CPqCkt~Ykr~kGsprV~Gd~ee~~~dd~e~ef~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 159 (786)
|||||||||||||||||+||||||++||+||||+|.. +++.++++|+|+||+|++|++.+.....+..+. ++....+
T Consensus 81 Cpqckt~Y~r~kgs~~~~~d~ee~~~dd~e~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 158 (1094)
T PLN02436 81 CPQCKTRYKRIKGSPRVEGDEEEDDIDDLENEFDYGNNGLDPEQVAEAMLSSRLNTGRHSNVSGIATPSEL--DSAPPGS 158 (1094)
T ss_pred CcccCCchhhccCCCCcCCccccccchhhhhhhcCcccccchHHHHHHHhhhhcccCcccccccccccccc--ccCCCcC
Confidence 9999999999999999999999999999999999872 233477899999999999998763211000011 1111125
Q ss_pred CCcccccCC--CCCCCCCcCcccccCCCCCCCcccccCCCCCCCCCCCCCCCCCCCCccccCCCccccchhhHHHHHhhh
Q 003929 160 EIPLLTYGN--EDVGISSDKHALIIPPFMGRGKRIHPMSFPDGFMTLPPRPMDPKKDLAVYGYGTVAWKERMEEWKKKQN 237 (786)
Q Consensus 160 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~yg~g~~~w~~~~~~wk~~~~ 237 (786)
++|+|++++ ++++ +++|++++++.+|.||||||+||+++++++++|.|||+||+++||||||+||||||+||+||+
T Consensus 159 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~wkerv~~wk~kq~ 236 (1094)
T PLN02436 159 QIPLLTYGEEDVEIS--SDRHALIVPPSTGHGNRVHPMPFPDSSASLQPRPMVPQKDLAVYGYGSVAWKDRMEEWKKKQN 236 (1094)
T ss_pred CCcccccCcccCccC--CcccccccCCcccccccccccccccccccCCCccCCccccccccccCcHHHHHHHHHHHhhhh
Confidence 789999876 5554 677888788888899999999999999999999999999999999999999999999999998
Q ss_pred hhhhhhccCCCCCCCCCCCCCCCCCCCcCccCCCCCceeeeccCCCCcchhHHHHHHHHHHHHHHHhhhhcccCCcchhH
Q 003929 238 EKLQVVKHQGGNGGGNNDGDGVDDPDLPMMDEGRQPLSRKLPISSSKISPYRLIILLRLVILGLFFHYRILHPVNDAYGL 317 (786)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pL~rk~~i~~~~~~~yR~~ii~~lv~l~~yl~wRi~~~~~~a~~l 317 (786)
++++++.+..+..++++++.+.+++|++++|++++||+||+++++++|+|||++++++|++|++||+||++|++.+++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~ 316 (1094)
T PLN02436 237 EKLQVVKHEGGNDGGNNDGDELDDPDLPMMDEGRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVNDAYGL 316 (1094)
T ss_pred hcccccccccccccCCCCCCCCCCcccccccccCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHH
Confidence 55555544322112344422344678899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccccchhhhhhhhhhhcCCCCCCCCceeEEeccCCCCCCCHHHHHHHHHHHHcCCC
Q 003929 318 WLTSVICEIWFAVSWILDQFPKWDPIVRETYLDRLSLRYEKEGKPSDLADIDIFVSTVDPMKEPPLITANTVLSILAVDY 397 (786)
Q Consensus 318 Wl~~~v~Ei~faf~wiL~q~~kw~Pv~R~t~~drL~~r~e~~~~~~~LP~VDVFV~TaDP~kEPp~v~~nTVLS~lAlDY 397 (786)
|+++|+||+||+|+|+|+|++||+||+|.||++||++|+++++++++||+||||||||||++|||++|+||||||||+||
T Consensus 317 Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DY 396 (1094)
T PLN02436 317 WLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDY 396 (1094)
T ss_pred HHHHHHHHHHHHHHHHHccCcccccccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999998878899999999999999999999999999999999999
Q ss_pred CCCccEEEEcCCCCchhhHHHHHHHHHHhhhhHhHHhhhcCCCCCchhhhhhccccccCCCChhHHHHHHHHHHHHHHHH
Q 003929 398 PVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFKIEPRAPEWYFAQKLDYLKDKVNPSFIRERRAMKREYEEFK 477 (786)
Q Consensus 398 P~~Kl~vYVsDDG~s~lTf~aL~Eaa~FA~~WvPFCkK~~IepRaPe~YFs~k~d~~k~~~~~~f~~e~r~~KreYee~k 477 (786)
|++||+|||||||||+||||||+|||+|||+||||||||+|||||||+||+++.++++++++++|++||++|||||||||
T Consensus 397 P~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K 476 (1094)
T PLN02436 397 PVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFK 476 (1094)
T ss_pred cccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCCCCcccCCCCCCCCCccCCCcceeeeccCCCcccCcCCccCcEEEEeccCCCCCCCCcchhhhHH
Q 003929 478 VRINGLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVRDIEGNLLPRLVYVSREKRPGFDHHKKAGAMNA 557 (786)
Q Consensus 478 ~RI~~L~~~~~~vp~~~w~m~dgt~W~g~~~rdHp~iIqVll~~~g~~d~~g~~lP~lvYvSREKrpg~~Hh~KAGALN~ 557 (786)
+|||+|+++.+++|+++|+|+|||+|||++++|||+|||||++++++.|.+|++||+||||||||||+|+||+||||||+
T Consensus 477 ~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~~~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNa 556 (1094)
T PLN02436 477 VKINALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNS 556 (1094)
T ss_pred HHHHHHHhhcccCchhhhhhccCccCCCCCCCCCccceEEEecCCCCcccccccCceEEEEecccCCCCCcchhhhhhhh
Confidence 99999998889999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred HHHhhcccCCCCEEEEecCCCCCCcHHHHHHhhcccccCCCCcceEEEecCccccCCCCCCCccchhhhhhhhhcccccc
Q 003929 558 LIRVSAVISNAPYLLNVDCDHYINNSKALREAMCFMMDPTSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDG 637 (786)
Q Consensus 558 lLrvSa~~TngpfILnLDaD~yinnp~~Lr~amcfflDp~~g~~vafVQtPQ~F~nid~~D~~~n~~~vFf~ii~~g~Dg 637 (786)
||||||+|||||||||||||||+|||+++|+||||||||+.|+++|||||||+|+|++++|+|+|++++||+++++|+||
T Consensus 557 LlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDG 636 (1094)
T PLN02436 557 LIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDG 636 (1094)
T ss_pred hhhhheeecCCceEEecccccccCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeecccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceecccchhhhhhhhcCCCCCCCCCCCCCcCCCCCCCcccccCCcccccccCC----CCCCCcchhhhhhhhhhhcc
Q 003929 638 IQGPIYVGTGCVFRRQALYGYDAPVKKKPPRKTCNCLPKWCCCCCRSRKKSKKGKS----NKKNKDTSKQIYALENIEEG 713 (786)
Q Consensus 638 ~~g~~~~GTgcv~RR~AL~G~~Pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 713 (786)
+|||+|+||||+|||+||||++||...+.+...++||++||||||++++++++..+ +.++.+...+++++++++++
T Consensus 637 lqGP~YvGTGC~frR~aLYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (1094)
T PLN02436 637 IQGPIYVGTGCVFRRQALYGYDAPKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEG 716 (1094)
T ss_pred CCCccccccCceeeeeeeeccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999987666667888999999999998877533222 12334555678899999999
Q ss_pred ccccccccccCCchhHHhhhcCCchHHHhhhhhhcCCCCCCCChhhHHHHHHHcccccCCCCCcCCCcceeeC
Q 003929 714 IEGIDNEKSSLMPQIKFEKKFGQSPVFIASTLKEAGGVPTGASTASLLNEAIHVISCGYEDKTDWGKEVCSRY 786 (786)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~FG~S~~fi~S~~~e~~~~~~~~~~~~~l~eA~~V~sC~YE~~T~WG~evGwiY 786 (786)
.++++++++..++++.++++||+|++||+|+.+++++++.+.+++++|+||++||||+||++|+||+||||||
T Consensus 717 ~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiY 789 (1094)
T PLN02436 717 IEGSNNEKSSETPQLKLEKKFGQSPVFVASTLLENGGVPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIY 789 (1094)
T ss_pred cccccchhhhhhhhhhHHhhhcccHHHHHHHHHhhcCCCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeec
Confidence 9998888888999999999999999999999999888898888999999999999999999999999999999
|
|
| >PLN02400 cellulose synthase | Back alignment and domain information |
|---|
| >PLN02638 cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >PLN02189 cellulose synthase | Back alignment and domain information |
|---|
| >PLN02915 cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >PLN02195 cellulose synthase A | Back alignment and domain information |
|---|
| >PLN02248 cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PLN02190 cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals | Back alignment and domain information |
|---|
| >PLN02893 Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A | Back alignment and domain information |
|---|
| >TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >PRK11498 bcsA cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan | Back alignment and domain information |
|---|
| >PRK05454 glucosyltransferase MdoH; Provisional | Back alignment and domain information |
|---|
| >COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >PRK14583 hmsR N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex | Back alignment and domain information |
|---|
| >TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 | Back alignment and domain information |
|---|
| >PRK11204 N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
| >PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A | Back alignment and domain information |
|---|
| >cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine | Back alignment and domain information |
|---|
| >PRK14716 bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI | Back alignment and domain information |
|---|
| >cd06438 EpsO_like EpsO protein participates in the methanolan synthesis | Back alignment and domain information |
|---|
| >PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan | Back alignment and domain information |
|---|
| >cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis | Back alignment and domain information |
|---|
| >cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
| >PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B | Back alignment and domain information |
|---|
| >cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin | Back alignment and domain information |
|---|
| >TIGR03469 HonB hopene-associated glycosyltransferase HpnB | Back alignment and domain information |
|---|
| >PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd06423 CESA_like CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis | Back alignment and domain information |
|---|
| >cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis | Back alignment and domain information |
|---|
| >cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
| >cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis | Back alignment and domain information |
|---|
| >cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >PLN02726 dolichyl-phosphate beta-D-mannosyltransferase | Back alignment and domain information |
|---|
| >cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase | Back alignment and domain information |
|---|
| >cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily | Back alignment and domain information |
|---|
| >cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function | Back alignment and domain information |
|---|
| >cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
| >cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase | Back alignment and domain information |
|---|
| >cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation | Back alignment and domain information |
|---|
| >cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine | Back alignment and domain information |
|---|
| >PRK10018 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK10073 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
| >COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
| >TIGR01556 rhamnosyltran L-rhamnosyltransferase | Back alignment and domain information |
|---|
| >PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
| >PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] | Back alignment and domain information |
|---|
| >PF13506 Glyco_transf_21: Glycosyl transferase family 21 | Back alignment and domain information |
|---|
| >PRK10063 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional | Back alignment and domain information |
|---|
| >COG5175 MOT2 Transcriptional repressor [Transcription] | Back alignment and domain information |
|---|
| >cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide | Back alignment and domain information |
|---|
| >cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides | Back alignment and domain information |
|---|
| >PF14446 Prok-RING_1: Prokaryotic RING finger family 1 | Back alignment and domain information |
|---|
| >COG1216 Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1 | Back alignment and domain information |
|---|
| >cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H) | Back alignment and domain information |
|---|
| >PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0 | Back alignment and domain information |
|---|
| >KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
| >smart00504 Ubox Modified RING finger domain | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 786 | ||||
| 1weo_A | 93 | Solution Structure Of Ring-Finger In The Catalytic | 5e-27 | ||
| 4hg6_A | 802 | Structure Of A Cellulose Synthase - Cellulose Trans | 8e-04 |
| >pdb|1WEO|A Chain A, Solution Structure Of Ring-Finger In The Catalytic Subunit (Irx3) Of Cellulose Synthase Length = 93 | Back alignment and structure |
|
| >pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 Length = 93 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 9e-40
Identities = 55/83 (66%), Positives = 66/83 (79%)
Query: 30 SVKELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYK 89
+K L GQ C+ICGD+I +T G+ FVACNEC FP CRPCYEYERREG Q CPQCKTRYK
Sbjct: 10 PLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69
Query: 90 RIKGSPRVDGDEEEDDTDDLENE 112
R++GSPRV+GDE+E+D D +
Sbjct: 70 RLRGSPRVEGDEDEEDIDSGPSS 92
|
| >1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B Length = 78 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus} Length = 101 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 786 | |||
| 1weo_A | 93 | Cellulose synthase, catalytic subunit (IRX3); stru | 100.0 | |
| 4hg6_A | 802 | Cellulose synthase subunit A; membrane translocati | 99.94 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.08 | |
| 1qg8_A | 255 | Protein (spore coat polysaccharide biosynthesis P | 98.9 | |
| 1xhb_A | 472 | Polypeptide N-acetylgalactosaminyltransferase 1; g | 98.83 | |
| 2ffu_A | 501 | Ppgalnact-2, polypeptide N-acetylgalactosaminyltra | 98.81 | |
| 2d7i_A | 570 | Polypeptide N-acetylgalactosaminyltransferase 10; | 98.81 | |
| 3bcv_A | 240 | Putative glycosyltransferase protein; protein stru | 98.79 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 98.6 | |
| 3ckj_A | 329 | Putative uncharacterized protein; mycobacteria, un | 98.4 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 98.14 | |
| 3f1y_A | 387 | Mannosyl-3-phosphoglycerate synthase; GT-A type gl | 97.87 | |
| 4fix_A | 657 | UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 | 97.84 | |
| 1e4u_A | 78 | Transcriptional repressor NOT4; gene regulation, t | 96.43 | |
| 1fo8_A | 343 | Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl | 95.1 | |
| 2bo4_A | 397 | Mannosylglycerate synthase; catalysis, glycosyltra | 93.51 | |
| 2nxv_A | 249 | ATP synthase subunits region ORF 6; majastridin, A | 93.07 | |
| 1vyx_A | 60 | ORF K3, K3RING; zinc-binding protein, ring domain, | 88.84 | |
| 2ea6_A | 69 | Ring finger protein 4; RNF4, RES4-26, ring domain, | 88.63 | |
| 2d8s_A | 80 | Cellular modulator of immune recognition; C-MIR, m | 87.5 | |
| 3ng2_A | 71 | RNF4, snurf, ring finger protein 4; ring domain, E | 86.92 | |
| 1t1h_A | 78 | Gspef-atpub14, armadillo repeat containing protein | 86.24 | |
| 2ckl_B | 165 | Ubiquitin ligase protein RING2; BMI1, RING1B, poly | 85.64 | |
| 1g25_A | 65 | CDK-activating kinase assembly factor MAT1; ring f | 85.48 | |
| 2xeu_A | 64 | Ring finger protein 4; transcription, zinc-finger, | 85.3 | |
| 2ect_A | 78 | Ring finger protein 126; metal binding protein, st | 84.97 | |
| 2ecy_A | 66 | TNF receptor-associated factor 3; metal binding pr | 84.18 | |
| 2ysl_A | 73 | Tripartite motif-containing protein 31; ring-type | 83.22 | |
| 2fy7_A | 287 | Beta-1,4-galactosyltransferase 1; M339H mutant, AP | 83.21 | |
| 2ecm_A | 55 | Ring finger and CHY zinc finger domain- containing | 82.96 | |
| 1iym_A | 55 | EL5; ring-H2 finger, ubiquitin ligase, DNA binding | 82.58 | |
| 3fl2_A | 124 | E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA | 82.15 | |
| 2csz_A | 76 | Synaptotagmin-like protein 4; exophilin 2, granuph | 81.83 | |
| 1v87_A | 114 | Deltex protein 2; ring-H2 domain, zinc-binding dom | 81.47 | |
| 2zu9_A | 394 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, g | 80.76 |
| >1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-45 Score=321.70 Aligned_cols=84 Identities=65% Similarity=1.327 Sum_probs=81.7
Q ss_pred cccccccCCccccccCccccccCCCCceeecCCCCCCcchhhhHHHHhhCCCcCCCCccccccccCCCCCCCCCCCCCcc
Q 003929 28 VTSVKELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVDGDEEEDDTD 107 (786)
Q Consensus 28 ~~~~~~~~~~~CqiCgd~Vg~~~~Ge~FvAC~eC~FpVCRpCYeyErkeG~q~CPqCkt~Ykr~kGsprV~Gd~ee~~~d 107 (786)
+|||+++++|+||||||+||+++|||+|||||||+|||||||||||||||||+|||||||||||||||||+|||+|+++|
T Consensus 8 ~kp~~~~~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYkr~kgsp~v~GDe~e~d~d 87 (93)
T 1weo_A 8 PKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDEDEEDID 87 (93)
T ss_dssp SSCCSCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCCTTCCCCTTSCCCCCSC
T ss_pred CCcccccCCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCccccccCCCCccccccccccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 003929 108 DLEN 111 (786)
Q Consensus 108 d~e~ 111 (786)
|+++
T Consensus 88 D~~~ 91 (93)
T 1weo_A 88 SGPS 91 (93)
T ss_dssp CCCS
T ss_pred cccc
Confidence 8764
|
| >4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
| >1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* | Back alignment and structure |
|---|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 | Back alignment and structure |
|---|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* | Back alignment and structure |
|---|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* | Back alignment and structure |
|---|
| >3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
| >3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A | Back alignment and structure |
|---|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
| >3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* | Back alignment and structure |
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| >4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* | Back alignment and structure |
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| >1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B | Back alignment and structure |
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| >1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* | Back alignment and structure |
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| >2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* | Back alignment and structure |
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| >2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* | Back alignment and structure |
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| >1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3 | Back alignment and structure |
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| >2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
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| >2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
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| >3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
| >1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2 | Back alignment and structure |
|---|
| >2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B | Back alignment and structure |
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| >1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1 | Back alignment and structure |
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| >2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens} | Back alignment and structure |
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| >2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} | Back alignment and structure |
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| >2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
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| >2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
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| >2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... | Back alignment and structure |
|---|
| >2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A | Back alignment and structure |
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| >1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1 | Back alignment and structure |
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| >3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens} | Back alignment and structure |
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| >2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1 | Back alignment and structure |
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| >2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* | Back alignment and structure |
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Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 786 | ||||
| d1weoa_ | 93 | g.44.1.1 (A:) Cellulose synthase A catalytic subun | 3e-46 | |
| d1g25a_ | 65 | g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapi | 4e-04 |
| >d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 93 | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: Cellulose synthase A catalytic subunit 7, IRX3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 157 bits (399), Expect = 3e-46
Identities = 55/79 (69%), Positives = 65/79 (82%)
Query: 30 SVKELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYK 89
+K L GQ C+ICGD+I +T G+ FVACNEC FP CRPCYEYERREG Q CPQCKTRYK
Sbjct: 10 PLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69
Query: 90 RIKGSPRVDGDEEEDDTDD 108
R++GSPRV+GDE+E+D D
Sbjct: 70 RLRGSPRVEGDEDEEDIDS 88
|
| >d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 65 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 786 | |||
| d1weoa_ | 93 | Cellulose synthase A catalytic subunit 7, IRX3 {Th | 100.0 | |
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 98.98 | |
| d1qg8a_ | 255 | Spore coat polysaccharide biosynthesis protein Sps | 98.65 | |
| d1omza_ | 265 | Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga | 98.43 | |
| d1ur6b_ | 52 | Not-4 N-terminal RING finger domain {Human (Homo s | 96.03 | |
| d1g25a_ | 65 | TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9 | 95.26 | |
| d1vyxa_ | 60 | IE1B protein (ORF K3), N-terminal domain {Kaposi's | 94.5 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 90.81 | |
| d1chca_ | 68 | Immediate early protein, IEEHV {Equine herpesvirus | 89.93 |
| >d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: Cellulose synthase A catalytic subunit 7, IRX3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=2.4e-45 Score=318.44 Aligned_cols=86 Identities=64% Similarity=1.307 Sum_probs=82.0
Q ss_pred ccccccccccccCCccccccCccccccCCCCceeecCCCCCCcchhhhHHHHhhCCCcCCCCccccccccCCCCCCCCCC
Q 003929 23 DEVARVTSVKELSGQICQICGDEIEITDNGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVDGDEE 102 (786)
Q Consensus 23 ~~~~~~~~~~~~~~~~CqiCgd~Vg~~~~Ge~FvAC~eC~FpVCRpCYeyErkeG~q~CPqCkt~Ykr~kGsprV~Gd~e 102 (786)
+++..+||++++++|+||||||+||+++|||+|||||||+|||||||||||||||||+|||||||||||||||||+||++
T Consensus 3 ~g~~g~kp~~~~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Ykr~kgsprv~gDe~ 82 (93)
T d1weoa_ 3 SGSSGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDED 82 (93)
T ss_dssp CSSSSSSCCSCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCCTTCCCCTTSCC
T ss_pred CCCCCCCChhhcccchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhhhhcCCCCCCCCcc
Confidence 34556799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccc
Q 003929 103 EDDTDD 108 (786)
Q Consensus 103 e~~~dd 108 (786)
||++||
T Consensus 83 e~~~d~ 88 (93)
T d1weoa_ 83 EEDIDS 88 (93)
T ss_dssp CCCSCC
T ss_pred cccccc
Confidence 998875
|
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]} | Back information, alignment and structure |
|---|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
|---|
| >d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]} | Back information, alignment and structure |
|---|