Citrus Sinensis ID: 003967
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 783 | 2.2.26 [Sep-21-2011] | |||||||
| Q54NP8 | 1922 | Kinesin-related protein 4 | yes | no | 0.273 | 0.111 | 0.481 | 3e-52 | |
| Q6S001 | 685 | Kinesin-related protein 1 | no | no | 0.324 | 0.370 | 0.453 | 8e-51 | |
| Q02224 | 2701 | Centromere-associated pro | yes | no | 0.301 | 0.087 | 0.483 | 2e-45 | |
| Q6RT24 | 2474 | Centromere-associated pro | yes | no | 0.292 | 0.092 | 0.477 | 2e-45 | |
| Q61771 | 747 | Kinesin-like protein KIF3 | no | no | 0.274 | 0.287 | 0.444 | 1e-39 | |
| O15066 | 747 | Kinesin-like protein KIF3 | no | no | 0.274 | 0.287 | 0.444 | 2e-39 | |
| Q15058 | 1648 | Kinesin-like protein KIF1 | no | no | 0.319 | 0.151 | 0.388 | 2e-37 | |
| P46871 | 742 | Kinesin-II 95 kDa subunit | no | no | 0.270 | 0.285 | 0.425 | 3e-37 | |
| P46869 | 786 | Kinesin-like protein FLA1 | N/A | no | 0.274 | 0.273 | 0.414 | 5e-37 | |
| P28741 | 701 | Kinesin-like protein KIF3 | no | no | 0.274 | 0.306 | 0.410 | 9e-37 |
| >sp|Q54NP8|KIF4_DICDI Kinesin-related protein 4 OS=Dictyostelium discoideum GN=kif4 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 207 bits (527), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/220 (48%), Positives = 151/220 (68%), Gaps = 6/220 (2%)
Query: 2 DLLN---CESGSLRLLDDPEKGTIVEKLVEEVVRDSEHLRHLIGICEAQRQVGETALNDN 58
DLLN L++ +D KG +V L EE+V + + L+ E +R +G T +ND+
Sbjct: 157 DLLNPTISNKKKLKIHEDIYKGVVVANLKEEIVISPDQIFALMNFGEERRHIGSTMMNDS 216
Query: 59 SSRSHQIIRLTIESSLRENSGCVKSFLASLNLVDLAGSERASQTNADGVRLKEGSHINRS 118
SSRSH I R+ I+S+ ++N G ++ +++L LVDLAGSER S T A+GVRLKEG+HIN+S
Sbjct: 217 SSRSHTIFRMQIQSTCKQN-GTIQ--MSTLTLVDLAGSERVSSTGAEGVRLKEGTHINKS 273
Query: 119 LLTLTTVIRKLSGGKRIGHIPYRDSKLTRILQHSLGGNARTAIICTISPALSHVEQTRNT 178
L+TL+ VI KLS K H+PYRDSKLTRILQ SLGGN++TAI+CTI+PA +H E++ +T
Sbjct: 274 LMTLSKVISKLSEEKTQQHVPYRDSKLTRILQPSLGGNSKTAILCTITPATTHQEESIST 333
Query: 179 LSFATSAKEVTNNAQVNMVVSDKRLVKQLQKEVARLEAEL 218
L FA AK V N ++N V ++K+ + E+ L+ +L
Sbjct: 334 LQFAKRAKRVKTNYKINQVADANTMLKKYESEILELQNQL 373
|
Microtubule-associated force-producing protein that plays a role in organelle transport. Its motor activity is directed toward the microtubule's plus end (By similarity). Cooperates with dynein in organizing spindle assembly during cell division. Dictyostelium discoideum (taxid: 44689) |
| >sp|Q6S001|KIF11_DICDI Kinesin-related protein 11 OS=Dictyostelium discoideum GN=kif11 PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q02224|CENPE_HUMAN Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|Q6RT24|CENPE_MOUSE Centromere-associated protein E OS=Mus musculus GN=Cenpe PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q61771|KIF3B_MOUSE Kinesin-like protein KIF3B OS=Mus musculus GN=Kif3b PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|O15066|KIF3B_HUMAN Kinesin-like protein KIF3B OS=Homo sapiens GN=KIF3B PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q15058|KIF14_HUMAN Kinesin-like protein KIF14 OS=Homo sapiens GN=KIF14 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|P46871|KRP95_STRPU Kinesin-II 95 kDa subunit OS=Strongylocentrotus purpuratus GN=KRP95 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|P46869|FLA10_CHLRE Kinesin-like protein FLA10 OS=Chlamydomonas reinhardtii GN=FLA10 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|P28741|KIF3A_MOUSE Kinesin-like protein KIF3A OS=Mus musculus GN=Kif3a PE=1 SV=2 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 783 | ||||||
| 297738509 | 942 | unnamed protein product [Vitis vinifera] | 0.992 | 0.824 | 0.770 | 0.0 | |
| 225444611 | 943 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.823 | 0.770 | 0.0 | |
| 224068564 | 952 | predicted protein [Populus trichocarpa] | 0.993 | 0.817 | 0.763 | 0.0 | |
| 255550317 | 891 | microtubule motor, putative [Ricinus com | 0.915 | 0.804 | 0.774 | 0.0 | |
| 297815436 | 942 | hypothetical protein ARALYDRAFT_323079 [ | 0.984 | 0.818 | 0.693 | 0.0 | |
| 356545793 | 950 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 0.816 | 0.690 | 0.0 | |
| 30690898 | 938 | ATP binding microtubule motor family pro | 0.980 | 0.818 | 0.686 | 0.0 | |
| 21954474 | 937 | kinesin-like protein [Arabidopsis thalia | 0.980 | 0.819 | 0.686 | 0.0 | |
| 22796151 | 937 | kinesin-like protein [Arabidopsis thalia | 0.980 | 0.819 | 0.686 | 0.0 | |
| 19570249 | 955 | kinesin-like protein NACK2 [Nicotiana ta | 0.989 | 0.811 | 0.688 | 0.0 |
| >gi|297738509|emb|CBI27754.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1216 bits (3147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 607/788 (77%), Positives = 688/788 (87%), Gaps = 11/788 (1%)
Query: 1 MDLLNCESGSLRLLDDPEKGTIVEKLVEEVVRDSEHLRHLIGICEAQRQVGETALNDNSS 60
+DLLN ESGSLRLLDDPEKGTIVEKLVEEVV+DS+HLRHLI ICEAQRQVGETALND SS
Sbjct: 161 VDLLNRESGSLRLLDDPEKGTIVEKLVEEVVKDSQHLRHLICICEAQRQVGETALNDKSS 220
Query: 61 RSHQIIRLTIESSLRENSGCVKSFLASLNLVDLAGSERASQTNADGVRLKEGSHINRSLL 120
RSHQIIRLTIESSLR+NSGCVKSF+ASLNLVDLAGSERASQTNADG RLKEGSHINRSLL
Sbjct: 221 RSHQIIRLTIESSLRDNSGCVKSFIASLNLVDLAGSERASQTNADGTRLKEGSHINRSLL 280
Query: 121 TLTTVIRKLSGGKRIGHIPYRDSKLTRILQHSLGGNARTAIICTISPALSHVEQTRNTLS 180
TLTTVIRKLSGGKRI HIPYRDSKLTRIL+ SLGGNARTAIICT+SP LSHVEQ+RNTLS
Sbjct: 281 TLTTVIRKLSGGKRIDHIPYRDSKLTRILRPSLGGNARTAIICTVSPGLSHVEQSRNTLS 340
Query: 181 FATSAKEVTNNAQVNMVVSDKRLVKQLQKEVARLEAELRSPDPSSSSCFRSLLMEKDLKI 240
FATSAKEVTN AQ+NMVV DK+LVK LQKEVARLEAELRSP+PSSS+C R+LLMEKDLKI
Sbjct: 341 FATSAKEVTNTAQINMVVPDKKLVKHLQKEVARLEAELRSPEPSSSACIRTLLMEKDLKI 400
Query: 241 QQLEREVKELKRQRDLAQPQF--ERKAHKEPKCGPSTQTARCLSFPVENESLPEKSVPDT 298
QQ+E+++KELKRQRD AQ Q ERK+ KE + S Q +CLSFP ENES + P T
Sbjct: 401 QQMEKDMKELKRQRDYAQSQLEVERKSRKEHEG--SHQVVKCLSFPDENESFSGRPTPKT 458
Query: 299 QPRNKVGKRAMVGQSVTSTDPSMLVHEIRKLEQRQRQLGEEANRALEVLHNEVTSHRLGS 358
+ + VG+ AMV QS TSTDPSMLVHEIRKLE +QRQLGEEANRALEVLH EV SHRLGS
Sbjct: 459 RRKVAVGRPAMVRQSATSTDPSMLVHEIRKLELQQRQLGEEANRALEVLHKEVVSHRLGS 518
Query: 359 RETADTIVRLLSEIKDIQEVSTIPEDIVIGNKANLKEELTRLNSQGSAIASLERKLENVQ 418
++ +I ++LSEIKD+Q V +IPEDI++ +KANLKEE+TRLNSQGS I SLERKLENVQ
Sbjct: 519 QDAVVSIAKMLSEIKDMQVVRSIPEDIMLQDKANLKEEITRLNSQGSTIESLERKLENVQ 578
Query: 419 KSIDTLALSFPNSDETVEFKTFKTQIKKKKTRPFSMSNSANMQNIIRSPCSPLSSSRKAM 478
KSID L SFP++++T E K Q KKKK PF++SN+ M N+IRSPCSP+ SSRK M
Sbjct: 579 KSIDKLVFSFPSTEKTPE---PKAQSKKKKVHPFALSNNGTMPNLIRSPCSPM-SSRKVM 634
Query: 479 DHENENKAPD-NSMLS-RGNTLPQSFADTPPKND-NGNISSREGTPASQKTNSVDVKKMQ 535
+ E EN+AP+ N+++S G+ LP + T P++D +GN SREGTP SQ++NSV+VKKMQ
Sbjct: 635 ECEVENRAPEHNNIVSGGGDALPGLYKATSPRSDQSGNCISREGTPVSQRSNSVNVKKMQ 694
Query: 536 RMFKNAAEENIRSIRSYVTELKERVAKLQYQKQLLVCQVLELEANDAASEETDIPNPSSM 595
RMFKNAAEENI+SIR+YVTELKERVAKLQYQKQLLVCQVLELE N+ A+EETD+ + S +
Sbjct: 695 RMFKNAAEENIQSIRAYVTELKERVAKLQYQKQLLVCQVLELETNEPATEETDMIDHSPV 754
Query: 596 PWHLMFEEQRMQIVMLWHLCHVSIIHRTQFYLLFRGDPTDQIYMEVELRRLTWLEQHFAE 655
WHLMFE QR QI+MLW+LCHVSIIHRTQF+LLF+GDP DQIYMEVELRRLTWLEQH AE
Sbjct: 755 SWHLMFESQRKQIIMLWYLCHVSIIHRTQFFLLFKGDPADQIYMEVELRRLTWLEQHLAE 814
Query: 656 LGNASPALLGDEPAGSVASSVKALKQEREYLAKRVSSKLTAEERELLYMKWDIPQVGKQR 715
LGNASPALLGDEPA V+SS+KALKQEREYLAKRVSSKLT EERE+LY+KW+IP VGKQR
Sbjct: 815 LGNASPALLGDEPASFVSSSIKALKQEREYLAKRVSSKLTEEEREMLYIKWEIPAVGKQR 874
Query: 716 RLQLVNKLWTDPLNMQNVKESAEIVAQLVGFCESGEHASKEMFELNFANPSDKKTWMGWN 775
RLQLVNKLWTDP NM+++KESAEIVA+LVGFCESGEH SKEMFELNF + SD+K WMGWN
Sbjct: 875 RLQLVNKLWTDPHNMEHIKESAEIVAKLVGFCESGEHVSKEMFELNFVSHSDRKPWMGWN 934
Query: 776 LISNLLHL 783
LISNLLHL
Sbjct: 935 LISNLLHL 942
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225444611|ref|XP_002275046.1| PREDICTED: uncharacterized protein LOC100254378 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224068564|ref|XP_002326146.1| predicted protein [Populus trichocarpa] gi|222833339|gb|EEE71816.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255550317|ref|XP_002516209.1| microtubule motor, putative [Ricinus communis] gi|223544695|gb|EEF46211.1| microtubule motor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|297815436|ref|XP_002875601.1| hypothetical protein ARALYDRAFT_323079 [Arabidopsis lyrata subsp. lyrata] gi|297321439|gb|EFH51860.1| hypothetical protein ARALYDRAFT_323079 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|356545793|ref|XP_003541319.1| PREDICTED: uncharacterized protein LOC100791845 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|30690898|ref|NP_189907.2| ATP binding microtubule motor family protein [Arabidopsis thaliana] gi|21743232|dbj|BAC03248.1| kinesin-like protein [Arabidopsis thaliana] gi|332644253|gb|AEE77774.1| ATP binding microtubule motor family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|21954474|emb|CAD42658.1| kinesin-like protein [Arabidopsis thaliana] gi|23094293|emb|CAD45645.1| putative kinesin-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|22796151|emb|CAD42234.1| kinesin-like protein [Arabidopsis thaliana] gi|23304348|emb|CAD48111.1| putative kinesin protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|19570249|dbj|BAB86284.1| kinesin-like protein NACK2 [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 783 | ||||||
| TAIR|locus:2084701 | 938 | TES "TETRASPORE" [Arabidopsis | 0.980 | 0.818 | 0.670 | 1.4e-275 | |
| UNIPROTKB|Q8S950 | 959 | nack1 "Kinesin-like protein NA | 0.975 | 0.796 | 0.619 | 7.3e-249 | |
| TAIR|locus:2014069 | 974 | HIK "HINKEL" [Arabidopsis thal | 0.632 | 0.508 | 0.576 | 7e-141 | |
| TAIR|locus:2050115 | 862 | AT2G21300 [Arabidopsis thalian | 0.332 | 0.301 | 0.636 | 2.8e-120 | |
| TAIR|locus:2120272 | 836 | AT4G38950 [Arabidopsis thalian | 0.332 | 0.311 | 0.630 | 2.2e-118 | |
| TAIR|locus:2135006 | 1004 | AT4G24170 [Arabidopsis thalian | 0.527 | 0.411 | 0.472 | 4.3e-113 | |
| TAIR|locus:2155051 | 1063 | AT5G66310 [Arabidopsis thalian | 0.476 | 0.350 | 0.484 | 1.6e-111 | |
| TAIR|locus:2162351 | 1087 | AT5G42490 [Arabidopsis thalian | 0.163 | 0.117 | 0.643 | 5.1e-66 | |
| DICTYBASE|DDB_G0291039 | 685 | kif11 "kinesin-7" [Dictyosteli | 0.326 | 0.373 | 0.456 | 2.5e-52 | |
| TAIR|locus:2202862 | 823 | ZCF125 [Arabidopsis thaliana ( | 0.323 | 0.307 | 0.441 | 3.7e-49 |
| TAIR|locus:2084701 TES "TETRASPORE" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2649 (937.6 bits), Expect = 1.4e-275, P = 1.4e-275
Identities = 532/793 (67%), Positives = 642/793 (80%)
Query: 1 MDLLNCESGSLRLLDDPEKGTIVEKLVEEVVRDSEHLRHLIGICEAQRQVGETALNDNSS 60
+DLLN ++G LRLLDDPEKGTIVE LVEEVV +HL+HLI ICE QRQVGETALND SS
Sbjct: 161 VDLLNRDTGPLRLLDDPEKGTIVENLVEEVVESRQHLQHLISICEDQRQVGETALNDKSS 220
Query: 61 RSHQIIRLTIESSLRENSGCVKSFLASLNLVDLAGSERASQTNADGVRLKEGSHINRSLL 120
RSHQIIRLTI SSLRE +GCV+SF+A+LNLVDLAGSERA QTNADG+RLKEGSHINRSLL
Sbjct: 221 RSHQIIRLTIHSSLREIAGCVQSFMATLNLVDLAGSERAFQTNADGLRLKEGSHINRSLL 280
Query: 121 TLTTVIRKLSGGKRIGHIPYRDSKLTRILQHSLGGNARTAIICTISPALSHVEQTRNTLS 180
TLTTVIRKLS G++ H+PYRDSKLTRILQ+SLGGNARTAIICTISPALSHVEQT+ TLS
Sbjct: 281 TLTTVIRKLSSGRKRDHVPYRDSKLTRILQNSLGGNARTAIICTISPALSHVEQTKKTLS 340
Query: 181 FATSAKEVTNNAQVNMVVSDKRLVKQLQKEVARLEAELRXXXXXXXXCFRSLLMEKDLKI 240
FA SAKEVTN A+VNMVVS+K+L+K LQ++VA+LE+ELR C +SLL+EK++KI
Sbjct: 341 FAMSAKEVTNCAKVNMVVSEKKLLKHLQQKVAKLESELRSPEPSSSTCLKSLLIEKEMKI 400
Query: 241 QQLEREVKELKRQRDLAQPQF--ERKAHKEPK----CGPSTQTARCLSFPVENESLPEKS 294
QQ+E E+KELKRQRD+AQ + ERKA KE K C P +Q ARCLS+ + ES+P KS
Sbjct: 401 QQMESEMKELKRQRDIAQSELDLERKA-KERKGSSECEPFSQVARCLSYHTKEESIPSKS 459
Query: 295 VPDTQPRNKVGKRAMVGQSVTSTDPSMLVHEIRKLEQRQRQLGEEANRALEVLHNEVTSH 354
VP ++ + ++ V QS+TS DP+ LV EIR LE+ Q++LGEEAN+AL+++H EVTSH
Sbjct: 460 VPSSRRTARDRRKDNVRQSLTSADPTALVQEIRLLEKHQKKLGEEANQALDLIHKEVTSH 519
Query: 355 RLGSRETADTIVRLLSEIKDIQEVSTIPEDIVIGNKANLKEELTRLNSQGSAIASLERKL 414
+LG ++ A+ + ++LSEI+D+Q+ + + E+IV+G+KANLKEE+ RLNSQ IA+LE+KL
Sbjct: 520 KLGDQQAAEKVAKMLSEIRDMQKSNLLTEEIVVGDKANLKEEINRLNSQ--EIAALEKKL 577
Query: 415 ENVQKSIDTLALSFPNSDETVEXXXXXXXXXXXXXRPFSMSNSANMQNIIRSPCSPLSSS 474
E VQ +ID L SF ++T + PF +SNS N+Q++IR PCSPLS +
Sbjct: 578 ECVQNTIDMLVSSFQTDEQTPDFRTQVKKKRLL---PFGLSNSPNLQHMIRGPCSPLSGT 634
Query: 475 RKAMDHENENKAPDNSMLSRGNTLPQSFADTPPKNDNGNI--SSREGTPASQKTNSVDVK 532
ENK P+++++S N+ P SF TPPK D+ SREGTP S++ NSVD+K
Sbjct: 635 --------ENKDPESNVVS-ANSAPVSFGATPPKRDDNRCRTQSREGTPVSRQANSVDIK 685
Query: 533 KMQRMFKNAAEENIRSIRSYVTELKERVAKLQYQKQLLVCQVLELEANDA-ASEETDIPN 591
+M RM+KNAAEENIR+I+SYVT LKERVAKLQYQKQLLVCQVLELEAN+ A+ E D +
Sbjct: 686 RMNRMYKNAAEENIRNIKSYVTGLKERVAKLQYQKQLLVCQVLELEANETGAASEYDATD 745
Query: 592 PSSMPWHLMFEEQRMQIVMLWHLCHVSIIHRTQFYLLFRGDPTDQIYMEVELRRLTWLEQ 651
S M W L FEEQR QI+MLWHLCH+SIIHRTQFY+LF+GDP DQIYMEVELRRLTWLEQ
Sbjct: 746 ESQMDWPLCFEEQRKQIIMLWHLCHISIIHRTQFYMLFKGDPADQIYMEVELRRLTWLEQ 805
Query: 652 HFAELGNASPALLGDEPAGSVASSVKALKQEREYLAKRVSSKLTAEERELLYMKWDIPQV 711
H AELGNASPALLGDEPA VASS++ALKQEREYLAKRV++KL AEERE+LY+KWD+P V
Sbjct: 806 HLAELGNASPALLGDEPASYVASSIRALKQEREYLAKRVNTKLGAEEREMLYLKWDVPPV 865
Query: 712 GKQRRLQLVNKLWTDPLNMQNVKESAEIVAQLVGFCESGEHASKEMFELNFANPSDKKTW 771
GKQRR Q +NKLWTDP NMQ+V+ESAEIVA+LVGFC+SGE KEMFELNFA+PSDKKTW
Sbjct: 866 GKQRRQQFINKLWTDPHNMQHVRESAEIVAKLVGFCDSGETIRKEMFELNFASPSDKKTW 925
Query: 772 M-GWNLISNLLHL 783
M GWN ISNLLHL
Sbjct: 926 MMGWNFISNLLHL 938
|
|
| UNIPROTKB|Q8S950 nack1 "Kinesin-like protein NACK1" [Nicotiana tabacum (taxid:4097)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2014069 HIK "HINKEL" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2050115 AT2G21300 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2120272 AT4G38950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2135006 AT4G24170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2155051 AT5G66310 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2162351 AT5G42490 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0291039 kif11 "kinesin-7" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2202862 ZCF125 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 783 | |||
| cd01374 | 321 | cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E | 6e-97 | |
| pfam11995 | 162 | pfam11995, DUF3490, Domain of unknown function (DU | 9e-86 | |
| smart00129 | 335 | smart00129, KISc, Kinesin motor, catalytic domain | 1e-75 | |
| pfam00225 | 326 | pfam00225, Kinesin, Kinesin motor domain | 4e-73 | |
| cd00106 | 328 | cd00106, KISc, Kinesin motor domain | 2e-66 | |
| cd01370 | 338 | cd01370, KISc_KIP3_like, Kinesin motor domain, KIP | 5e-56 | |
| cd01365 | 356 | cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K | 5e-54 | |
| cd01366 | 329 | cd01366, KISc_C_terminal, Kinesin motor domain, KI | 2e-51 | |
| cd01371 | 333 | cd01371, KISc_KIF3, Kinesin motor domain, kinesins | 3e-50 | |
| cd01364 | 352 | cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC | 2e-48 | |
| cd01369 | 325 | cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine | 2e-48 | |
| cd01372 | 341 | cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik | 2e-48 | |
| cd01373 | 337 | cd01373, KISc_KLP2_like, Kinesin motor domain, KLP | 3e-45 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 7e-43 | |
| cd01367 | 322 | cd01367, KISc_KIF2_like, Kinesin motor domain, KIF | 7e-43 | |
| PLN03188 | 1320 | PLN03188, PLN03188, kinesin-12 family protein; Pro | 3e-38 | |
| cd01376 | 319 | cd01376, KISc_KID_like, Kinesin motor domain, KIF2 | 3e-36 | |
| cd01375 | 334 | cd01375, KISc_KIF9_like, Kinesin motor domain, KIF | 3e-35 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 2e-34 | |
| cd01368 | 345 | cd01368, KISc_KIF23_like, Kinesin motor domain, KI | 5e-30 |
| >gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
Score = 303 bits (779), Expect = 6e-97
Identities = 119/187 (63%), Positives = 135/187 (72%), Gaps = 1/187 (0%)
Query: 2 DLLNCESGSLRLLDDPEKGTIVEKLVEEVVRDSEHLRHLIGICEAQRQVGETALNDNSSR 61
DLL+ LR+ +DP KG +V L EE+V EHL LI E R VGET N+ SSR
Sbjct: 136 DLLSPSPQELRIREDPNKGVVVAGLTEEIVTSPEHLLQLIARGEKNRHVGETDFNERSSR 195
Query: 62 SHQIIRLTIESSLRENSGCVKSFLASLNLVDLAGSERASQTNADGVRLKEGSHINRSLLT 121
SH I +LTIES R +S +++LNL+DLAGSERASQT A G R KEGS IN+SLLT
Sbjct: 196 SHTIFQLTIESRERGDSESGTVRVSTLNLIDLAGSERASQTGA-GERRKEGSFINKSLLT 254
Query: 122 LTTVIRKLSGGKRIGHIPYRDSKLTRILQHSLGGNARTAIICTISPALSHVEQTRNTLSF 181
L TVI KLS GK GHIPYRDSKLTRILQ SL GNARTAIICTISPA SHVE+T NTL F
Sbjct: 255 LGTVISKLSEGKNSGHIPYRDSKLTRILQPSLSGNARTAIICTISPASSHVEETLNTLKF 314
Query: 182 ATSAKEV 188
A+ AK+V
Sbjct: 315 ASRAKKV 321
|
This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 321 |
| >gnl|CDD|221365 pfam11995, DUF3490, Domain of unknown function (DUF3490) | Back alignment and domain information |
|---|
| >gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238054 cd00106, KISc, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 783 | |||
| PF11995 | 161 | DUF3490: Domain of unknown function (DUF3490); Int | 100.0 | |
| KOG0245 | 1221 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG4280 | 574 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0242 | 675 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 100.0 | |
| KOG0240 | 607 | consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | 100.0 | |
| KOG0241 | 1714 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01373 | 337 | KISc_KLP2_like Kinesin motor domain, KLP2-like sub | 100.0 | |
| cd01370 | 338 | KISc_KIP3_like Kinesin motor domain, KIP3-like sub | 100.0 | |
| cd01364 | 352 | KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind | 100.0 | |
| cd01368 | 345 | KISc_KIF23_like Kinesin motor domain, KIF23-like s | 100.0 | |
| cd01365 | 356 | KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p | 100.0 | |
| cd01374 | 321 | KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like | 100.0 | |
| cd01371 | 333 | KISc_KIF3 Kinesin motor domain, kinesins II or KIF | 100.0 | |
| cd01372 | 341 | KISc_KIF4 Kinesin motor domain, KIF4-like subfamil | 100.0 | |
| cd01369 | 325 | KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy | 100.0 | |
| cd01376 | 319 | KISc_KID_like Kinesin motor domain, KIF22/Kid-like | 100.0 | |
| cd01367 | 322 | KISc_KIF2_like Kinesin motor domain, KIF2-like gro | 100.0 | |
| cd01375 | 334 | KISc_KIF9_like Kinesin motor domain, KIF9-like sub | 100.0 | |
| KOG0244 | 913 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01366 | 329 | KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ | 100.0 | |
| smart00129 | 335 | KISc Kinesin motor, catalytic domain. ATPase. Micr | 100.0 | |
| PF00225 | 335 | Kinesin: Kinesin motor domain; InterPro: IPR001752 | 100.0 | |
| KOG0246 | 676 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd00106 | 328 | KISc Kinesin motor domain. This catalytic (head) d | 100.0 | |
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 100.0 | |
| KOG0247 | 809 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 99.97 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 89.4 |
| >PF11995 DUF3490: Domain of unknown function (DUF3490); InterPro: IPR021881 This presumed domain is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-90 Score=658.34 Aligned_cols=161 Identities=60% Similarity=1.007 Sum_probs=155.4
Q ss_pred hHHHHHHHHHHHhhhcccccchhhhhhhhhcCCCCCcceeeehhHHHHHHHHHHhhhCCCCCCCCCCCCCccHHHHHHHH
Q 003967 600 MFEEQRMQIVMLWHLCHVSIIHRTQFYLLFRGDPTDQIYMEVELRRLTWLEQHFAELGNASPALLGDEPAGSVASSVKAL 679 (783)
Q Consensus 600 ~F~~~q~eIieLW~~C~vslvHRTyFfLLFkGd~~D~iYmEVElRRLs~lk~~~~~~g~~~~~~~~~~~~~s~~ss~k~l 679 (783)
+||+||++||||||+|||||||||||||||||||+|+||||||||||+|||+||++ |+ || ++|++++|++||+|||
T Consensus 1 ~Fe~qq~~IIeLW~~C~VsLvHRTyFfLLFkGdpaD~iYmEVElRRLs~Lk~~fs~-~~--~~-~~~~~~~s~~sS~kaL 76 (161)
T PF11995_consen 1 EFERQQQEIIELWHACNVSLVHRTYFFLLFKGDPADSIYMEVELRRLSFLKETFSE-GG--QA-AGGGHTLSLASSIKAL 76 (161)
T ss_pred ChHHHHHHHHHHHHhcCcchhhhhhhhheecCCcccceEEEeehHHHHHHHHHhcc-CC--cc-cCCCCcccHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999 44 33 3455899999999999
Q ss_pred HHHHHHHHHHHhhhCCHHHHHHHHhhcCCCCCCccchhhhhhhccCCCcchhhHHHHHHHHHHHhhcccCCcchhhhhhc
Q 003967 680 KQEREYLAKRVSSKLTAEERELLYMKWDIPQVGKQRRLQLVNKLWTDPLNMQNVKESAEIVAQLVGFCESGEHASKEMFE 759 (783)
Q Consensus 680 ~rEr~~l~k~m~~rl~~~ere~ly~kwgi~l~~k~Rrlql~~~lWt~~~d~~hv~eSA~~Vaklvgf~e~~~~~~kemfg 759 (783)
+|||+||||||++|||.+|||+||.||||||+||||||||||+|||||+||+||+|||+|||||||||||| +|+|||||
T Consensus 77 ~rER~~L~k~m~~rls~eere~ly~kWgI~l~sK~RrlQL~~~LWt~~~d~~Hv~eSA~lVAkLvgf~e~g-~~~KEMFg 155 (161)
T PF11995_consen 77 RREREMLAKQMQKRLSREEREELYKKWGIPLDSKQRRLQLANRLWTDTKDMEHVRESAELVAKLVGFVEPG-QASKEMFG 155 (161)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHhcCCCCcchHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhhcccc-ccHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred ccccCC
Q 003967 760 LNFANP 765 (783)
Q Consensus 760 l~f~~~ 765 (783)
|||+||
T Consensus 156 LnF~~~ 161 (161)
T PF11995_consen 156 LNFTPP 161 (161)
T ss_pred cCCCCC
Confidence 999997
|
This domain is found in eukaryotes. This domain is about 160 amino acids in length. This domain is found associated with PF00225 from PFAM. This domain is found associated with PF00225 from PFAM. This domain has two conserved sequence motifs: EVE and ESA. |
| >KOG0245 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4280 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0242 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0241 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >KOG0244 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >smart00129 KISc Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport | Back alignment and domain information |
|---|
| >KOG0246 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd00106 KISc Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0247 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 783 | ||||
| 1t5c_A | 349 | Crystal Structure Of The Motor Domain Of Human Kine | 5e-42 | ||
| 3b6u_A | 372 | Crystal Structure Of The Motor Domain Of Human Kine | 3e-36 | ||
| 3b6v_A | 395 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-32 | ||
| 2vvg_A | 350 | Crystal Structure Of The G.Intestinalis Kinesin 2 G | 2e-32 | ||
| 4aqv_C | 373 | Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma | 7e-32 | ||
| 1ii6_A | 368 | Crystal Structure Of The Mitotic Kinesin Eg5 In Com | 1e-31 | ||
| 4ap0_A | 370 | The Mitotic Kinesin Eg5 In Complex With Mg-Adp And | 1e-31 | ||
| 3lre_A | 355 | Crystal Structure Analysis Of Human Kinesin-8 Motor | 1e-31 | ||
| 4a28_A | 368 | Eg5-2 Length = 368 | 1e-31 | ||
| 4a1z_A | 368 | Eg5-1 Length = 368 | 1e-31 | ||
| 1q0b_A | 367 | Crystal Structure Of The Motor Protein Ksp In Compl | 1e-31 | ||
| 3hqd_A | 369 | Human Kinesin Eg5 Motor Domain In Complex With Ampp | 1e-31 | ||
| 1x88_A | 359 | Human Eg5 Motor Domain Bound To Mg-Adp And Monastro | 1e-31 | ||
| 2y5w_A | 365 | Crystal Structure Of Drosophila Melanogaster Kinesi | 2e-31 | ||
| 1goj_A | 355 | Structure Of A Fast Kinesin: Implications For Atpas | 2e-30 | ||
| 3zcw_A | 348 | Eg5 - New Allosteric Binding Site Length = 348 | 3e-30 | ||
| 2wbe_C | 373 | Kinesin-5-Tubulin Complex With Amppnp Length = 373 | 2e-29 | ||
| 3gbj_A | 354 | Crystal Structure Of The Motor Domain Of Kinesin Ki | 3e-29 | ||
| 1ia0_K | 394 | Kif1a Head-Microtubule Complex Structure In Atp-For | 7e-29 | ||
| 4atx_C | 340 | Rigor Kinesin Motor Domain With An Ordered Neck-Lin | 1e-28 | ||
| 1i5s_A | 367 | Crystal Structure Of The Kif1a Motor Domain Complex | 1e-28 | ||
| 1mkj_A | 349 | Human Kinesin Motor Domain With Docked Neck Linker | 2e-28 | ||
| 4a14_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 2e-28 | ||
| 1i6i_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 2e-28 | ||
| 1vfv_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 3e-28 | ||
| 1sdm_A | 369 | Crystal Structure Of Kinesin-Like Calmodulin Bindin | 4e-27 | ||
| 1bg2_A | 325 | Human Ubiquitous Kinesin Motor Domain Length = 325 | 5e-27 | ||
| 2owm_A | 443 | Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 | 1e-26 | ||
| 2heh_A | 387 | Crystal Structure Of The Kif2c Motor Domain (Casp T | 2e-25 | ||
| 3h4s_A | 386 | Structure Of The Complex Of A Mitotic Kinesin With | 2e-25 | ||
| 2xt3_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 3e-25 | ||
| 3bfn_A | 388 | Crystal Structure Of The Motor Domain Of Human Kine | 4e-25 | ||
| 4h1g_A | 715 | Structure Of Candida Albicans Kar3 Motor Domain Fus | 5e-25 | ||
| 1v8j_A | 410 | The Crystal Structure Of The Minimal Functional Dom | 1e-24 | ||
| 3edl_D | 331 | Kinesin13-Microtubule Ring Complex Length = 331 | 3e-24 | ||
| 2gry_A | 420 | Crystal Structure Of The Human Kif2 Motor Domain In | 4e-23 | ||
| 2h58_A | 330 | Crystal Structure Of The Kifc3 Motor Domain In Comp | 2e-22 | ||
| 1cz7_A | 406 | The Crystal Structure Of A Minus-End Directed Micro | 3e-22 | ||
| 3u06_A | 412 | Crystal Structure Of The Kinesin-14 Ncdg347d Length | 3e-22 | ||
| 2ncd_A | 420 | Ncd (Non-Claret Disjunctional) Dimer From D. Melano | 3e-22 | ||
| 3l1c_A | 383 | Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | 4e-22 | ||
| 4etp_A | 403 | C-Terminal Motor And Motor Homology Domain Of Kar3v | 1e-21 | ||
| 4gkr_A | 371 | Structure Of The C-Terminal Motor Domain Of Kar3 Fr | 2e-21 | ||
| 1n6m_A | 409 | Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY | 2e-21 | ||
| 3kar_A | 346 | The Motor Domain Of Kinesin-Like Protein Kar3, A Sa | 4e-21 | ||
| 1f9t_A | 358 | Crystal Structures Of Kinesin Mutants Reveal A Sign | 4e-21 | ||
| 1f9w_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 2e-20 | ||
| 1f9u_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 2e-20 | ||
| 1f9v_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 3e-20 | ||
| 3pxn_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 4e-20 | ||
| 3dc4_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 5e-20 | ||
| 3nwn_A | 359 | Crystal Structure Of The Human Kif9 Motor Domain In | 2e-19 | ||
| 1ry6_A | 360 | Crystal Structure Of Internal Kinesin Motor Domain | 2e-19 | ||
| 3t0q_A | 349 | Motor Domain Structure Of The Kar3-Like Kinesin Fro | 3e-19 | ||
| 2rep_A | 376 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-18 | ||
| 3kin_B | 117 | Kinesin (Dimeric) From Rattus Norvegicus Length = 1 | 3e-14 | ||
| 2kin_B | 100 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 4e-14 | ||
| 2kin_A | 238 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 3e-06 |
| >pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 | Back alignment and structure |
|
| >pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 | Back alignment and structure |
| >pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 | Back alignment and structure |
| >pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 | Back alignment and structure |
| >pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 | Back alignment and structure |
| >pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 | Back alignment and structure |
| >pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 | Back alignment and structure |
| >pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 | Back alignment and structure |
| >pdb|4A28|A Chain A, Eg5-2 Length = 368 | Back alignment and structure |
| >pdb|4A1Z|A Chain A, Eg5-1 Length = 368 | Back alignment and structure |
| >pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 | Back alignment and structure |
| >pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 | Back alignment and structure |
| >pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 | Back alignment and structure |
| >pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 | Back alignment and structure |
| >pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 | Back alignment and structure |
| >pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 | Back alignment and structure |
| >pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 | Back alignment and structure |
| >pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 | Back alignment and structure |
| >pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 | Back alignment and structure |
| >pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 | Back alignment and structure |
| >pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 | Back alignment and structure |
| >pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 | Back alignment and structure |
| >pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 | Back alignment and structure |
| >pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 | Back alignment and structure |
| >pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 | Back alignment and structure |
| >pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 | Back alignment and structure |
| >pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 | Back alignment and structure |
| >pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 | Back alignment and structure |
| >pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 | Back alignment and structure |
| >pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 | Back alignment and structure |
| >pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 | Back alignment and structure |
| >pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 | Back alignment and structure |
| >pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 | Back alignment and structure |
| >pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 | Back alignment and structure |
| >pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 | Back alignment and structure |
| >pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 | Back alignment and structure |
| >pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 | Back alignment and structure |
| >pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 | Back alignment and structure |
| >pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | Back alignment and structure |
| >pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 | Back alignment and structure |
| >pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 | Back alignment and structure |
| >pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 | Back alignment and structure |
| >pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 | Back alignment and structure |
| >pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 | Back alignment and structure |
| >pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 | Back alignment and structure |
| >pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 | Back alignment and structure |
| >pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 | Back alignment and structure |
| >pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 | Back alignment and structure |
| >pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 | Back alignment and structure |
| >pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 | Back alignment and structure |
| >pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 | Back alignment and structure |
| >pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 | Back alignment and structure |
| >pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 304 bits (782), Expect = 3e-97
Identities = 100/211 (47%), Positives = 125/211 (59%), Gaps = 6/211 (2%)
Query: 2 DLLN--CESGSLRLLDDPEKGTIVEKLVEEVVRDSEHLRHLIGICEAQRQVGETALNDNS 59
DLL + L + +D + V L EEVV SE I E R GET +N S
Sbjct: 140 DLLCGTQKMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRS 199
Query: 60 SRSHQIIRLTIESSLRENSGCVKSFL--ASLNLVDLAGSERASQTNADGVRLKEGSHINR 117
SRSH I R+ +ES + + + + LNLVDLAGSERA+QT A GVRLKEG +INR
Sbjct: 200 SRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINR 259
Query: 118 SLLTLTTVIRKLSGGKRIGHIPYRDSKLTRILQHSLGGNARTAIICTISPALSHVEQTRN 177
SL L VI+KLS G+ G I YRDSKLTRILQ+SLGGNA+T IICTI+P ++T
Sbjct: 260 SLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLT 317
Query: 178 TLSFATSAKEVTNNAQVNMVVSDKRLVKQLQ 208
L FA++AK + N VN V +D+
Sbjct: 318 ALQFASTAKYMKNTPYVNEVSTDELEHHHHH 348
|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 | Back alignment and structure |
|---|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 783 | |||
| 2y65_A | 365 | Kinesin, kinesin heavy chain; motor protein; HET: | 100.0 | |
| 3cob_A | 369 | Kinesin heavy chain-like protein; motor, switch II | 100.0 | |
| 3b6u_A | 372 | Kinesin-like protein KIF3B; structural genomics co | 100.0 | |
| 3bfn_A | 388 | Kinesin-like protein KIF22; limited proteolysis, s | 100.0 | |
| 1goj_A | 355 | Kinesin, kinesin heavy chain; motor protein, ATPas | 100.0 | |
| 1t5c_A | 349 | CENP-E protein, centromeric protein E; kinesin mot | 100.0 | |
| 2zfi_A | 366 | Kinesin-like protein KIF1A, kinesin heavy chain is | 100.0 | |
| 2vvg_A | 350 | Kinesin-2; motor protein, nucleotide-binding, micr | 100.0 | |
| 1x88_A | 359 | Kinesin-like protein KIF11; switch II, motor domai | 100.0 | |
| 2owm_A | 443 | Nckin3-434, related to kinesin-like protein KIF1C; | 100.0 | |
| 2wbe_C | 373 | Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit | 100.0 | |
| 3lre_A | 355 | Kinesin-like protein KIF18A; motor protein, nucleo | 100.0 | |
| 1bg2_A | 325 | Kinesin; motor protein, ATPase, microtubule associ | 100.0 | |
| 4a14_A | 344 | Kinesin, kinesin-like protein KIF7; motor protein, | 100.0 | |
| 3gbj_A | 354 | KIF13B protein; kinesin, motor domain, ADP, struct | 100.0 | |
| 2h58_A | 330 | Kinesin-like protein KIFC3 variant; motor domain, | 100.0 | |
| 1f9v_A | 347 | Kinesin-like protein KAR3; kinesin-related protein | 100.0 | |
| 3t0q_A | 349 | AGR253WP; kinesin, alpha and beta proteins, P-loop | 100.0 | |
| 2nr8_A | 358 | Kinesin-like protein KIF9; motor domain, ADP, stru | 100.0 | |
| 2rep_A | 376 | Kinesin-like protein KIFC1; structural genomics co | 100.0 | |
| 1ry6_A | 360 | Internal kinesin; kinesin motor domain, nucleotide | 100.0 | |
| 3nwn_A | 359 | Kinesin-like protein KIF9; motor domain, ADP, stru | 100.0 | |
| 2heh_A | 387 | KIF2C protein; kinesin, motor domain, ADP, structu | 100.0 | |
| 4etp_A | 403 | Kinesin-like protein KAR3; kinesin motor protein, | 100.0 | |
| 1v8k_A | 410 | Kinesin-like protein KIF2C; microtubule destabiliz | 100.0 | |
| 3u06_A | 412 | Protein claret segregational; motor domain, stalk | 100.0 | |
| 4h1g_A | 715 | Maltose binding protein-cakar3 motor domain fusio; | 100.0 | |
| 3dc4_A | 344 | Kinesin-like protein NOD; catalytic domain, ATPase | 100.0 | |
| 2kin_B | 100 | Kinesin; motor protein, cytoskeleton; HET: ADP; 2. | 99.96 | |
| 3kin_B | 117 | Kinesin heavy chain; motor protein, cytoskeleton; | 99.95 |
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-52 Score=454.07 Aligned_cols=211 Identities=39% Similarity=0.541 Sum_probs=176.1
Q ss_pred CCCCCCCCCCceEEEcCCCCeEEcCcEEEEcCCHHHHHHHHHHHHhhcccccccCCCCCCCceeEEEEEEEeeeccCCCc
Q 003967 1 MDLLNCESGSLRLLDDPEKGTIVEKLVEEVVRDSEHLRHLIGICEAQRQVGETALNDNSSRSHQIIRLTIESSLRENSGC 80 (783)
Q Consensus 1 ~DLL~p~~~~L~IrEDp~~G~~VegLtev~V~S~eel~~LL~~G~~~R~v~~T~~N~~SSRSH~IftI~Ie~~~~~~~~~ 80 (783)
||||++...+|.|++|+.+|++|.||+++.|.|+++++.+|..|.++|++++|.||..|||||+||+|+|++......
T Consensus 150 ~DLL~~~~~~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~-- 227 (365)
T 2y65_A 150 RDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQ-- 227 (365)
T ss_dssp EETTCTTCCSBCEEECSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTTC--
T ss_pred eecccCCcCCceEEECCCCCEEecCCEEEecCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecCCC--
Confidence 699999888999999999999999999999999999999999999999999999999999999999999998654322
Q ss_pred ceeeeeeeeeecCCCCccccccCccchhhHHhHHhhHhHHHHHHHHHHhhcCCCCCcccCCCCcchhhcccccCCCCccc
Q 003967 81 VKSFLASLNLVDLAGSERASQTNADGVRLKEGSHINRSLLTLTTVIRKLSGGKRIGHIPYRDSKLTRILQHSLGGNARTA 160 (783)
Q Consensus 81 ~~s~~SkL~fVDLAGSER~~kt~s~G~rlkEg~~INkSLlaLg~VI~aLs~~~k~~hIPYRDSKLTrLLqdSLGGNskT~ 160 (783)
....|+|+|||||||||+.++++.|.+++|+.+||+||++||+||.+|+++ +..||||||||||+||||+|||||+|+
T Consensus 228 -~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~-~~~hvPyRdSkLT~lLqdsLgGnskt~ 305 (365)
T 2y65_A 228 -KKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADG-NKTHIPYRDSKLTRILQESLGGNARTT 305 (365)
T ss_dssp -CEEEEEEEEEECCCCCC----------------CCHHHHHHHHHHHHHHHC-CCSCCCGGGCHHHHHTGGGTTSSSEEE
T ss_pred -CEeEEEEEEEECCCCCcchhcCCcchhHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCccccCHHHHHHHhhcCCCccEE
Confidence 346799999999999999999999999999999999999999999999875 347999999999999999999999999
Q ss_pred eEeccCCCCCCHHHHHHHHHHHHHhcccccccccccccCHHHHHHHHHHHHHHHH
Q 003967 161 IICTISPALSHVEQTRNTLSFATSAKEVTNNAQVNMVVSDKRLVKQLQKEVARLE 215 (783)
Q Consensus 161 mIatVSPs~~~~eETLsTLrFAsRAk~Ikn~p~vN~~~s~~~lIk~Lq~EIa~Lk 215 (783)
|||||||+..+++||++||+||+|||.|+|.|.+|+..+.+.++++|++|+.+|+
T Consensus 306 mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~~~~~~~~~~e~~~~~ 360 (365)
T 2y65_A 306 IVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNA 360 (365)
T ss_dssp EEEEECCBGGGHHHHHHHHHHHHHHTTCEEECCCEEECCSHHHHHC---------
T ss_pred EEEEecCccCCHHHHHHHHHHHHHHhcccCcceeCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888775
|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A* | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* | Back alignment and structure |
|---|
| >4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli} | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 783 | ||||
| d1goja_ | 354 | c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 | 1e-45 | |
| d2zfia1 | 349 | c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), | 5e-43 | |
| d1bg2a_ | 323 | c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId | 3e-41 | |
| d1f9va_ | 342 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 8e-41 | |
| d1x88a1 | 345 | c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), | 2e-40 | |
| d1sdma_ | 364 | c.37.1.9 (A:) Kinesin heavy chain-like protein {Po | 8e-40 | |
| d1v8ka_ | 362 | c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c | 1e-38 | |
| d1ry6a_ | 330 | c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu | 3e-38 | |
| d2ncda_ | 368 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 1e-33 |
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Neurospora crassa [TaxId: 5141]
Score = 165 bits (417), Expect = 1e-45
Identities = 83/209 (39%), Positives = 114/209 (54%), Gaps = 4/209 (1%)
Query: 1 MDLLNCESGSLRLLDDPEKGTIVEKLVEEVVRDSEHLRHLIGICEAQRQVGETALNDNSS 60
DLL ++ +L + ++ +G V+ L+E V + + ++ R V T +N SS
Sbjct: 146 RDLLAPQNDNLPVHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESS 205
Query: 61 RSHQIIRLTIESSLRENSGCVKSFLASLNLVDLAGSERASQTNADGVRLKEGSHINRSLL 120
RSH I +TI E L LVDLAGSE+ +T A G L+E IN+SL
Sbjct: 206 RSHSIFVITITQKNVETGSAKSGQL---FLVDLAGSEKVGKTGASGQTLEEAKKINKSLS 262
Query: 121 TLTTVIRKLSGGKRIGHIPYRDSKLTRILQHSLGGNARTAIICTISPALSHVEQTRNTLS 180
L VI L+ GK H+PYRDSKLTRILQ SLGGN+RT +I SP+ + +T +TL
Sbjct: 263 ALGMVINALTDGKS-SHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLR 321
Query: 181 FATSAKEVTNNAQVNMVVSDKRLVKQLQK 209
F AK + N A+VN +S L + L K
Sbjct: 322 FGMRAKSIKNKAKVNAELSPAELKQMLAK 350
|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 783 | |||
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1goja_ | 354 | Kinesin {Neurospora crassa [TaxId: 5141]} | 100.0 | |
| d1x88a1 | 345 | Kinesin {Human (Homo sapiens), mitotic kinesin eg5 | 100.0 | |
| d2zfia1 | 349 | Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d1bg2a_ | 323 | Kinesin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1f9va_ | 342 | Kinesin motor Ncd (non-claret disjunctional) {Bake | 100.0 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 |
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin heavy chain-like protein species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=100.00 E-value=2.3e-46 Score=404.75 Aligned_cols=211 Identities=36% Similarity=0.509 Sum_probs=180.6
Q ss_pred CCCCCCCCC---CceEEEcCCCCeEEcCcEEEEcCCHHHHHHHHHHHHhhcccccccCCCCCCCceeEEEEEEEeeeccC
Q 003967 1 MDLLNCESG---SLRLLDDPEKGTIVEKLVEEVVRDSEHLRHLIGICEAQRQVGETALNDNSSRSHQIIRLTIESSLREN 77 (783)
Q Consensus 1 ~DLL~p~~~---~L~IrEDp~~G~~VegLtev~V~S~eel~~LL~~G~~~R~v~~T~~N~~SSRSH~IftI~Ie~~~~~~ 77 (783)
||||+|... .+.+++|+.+|++|.|++++.|.++++++.+|..|.++|++++|.+|..|||||+||+|+|.+.....
T Consensus 137 ~DLL~~~~~~~~~l~~~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~~ 216 (364)
T d1sdma_ 137 VDLLLPKQAKRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQT 216 (364)
T ss_dssp EETTSCTTSCCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETTT
T ss_pred ccccCcccccccccceeecccCccccccceeeeeCCHHHHHHHhhccceeeccccccccccccccceEEEEEEEEeccCc
Confidence 699987553 78999999999999999999999999999999999999999999999999999999999999875543
Q ss_pred CCcceeeeeeeeeecCCCCccccccCccchhhHHhHHhhHhHHHHHHHHHHhhcCCCCCcccCCCCcchhhcccccCCCC
Q 003967 78 SGCVKSFLASLNLVDLAGSERASQTNADGVRLKEGSHINRSLLTLTTVIRKLSGGKRIGHIPYRDSKLTRILQHSLGGNA 157 (783)
Q Consensus 78 ~~~~~s~~SkL~fVDLAGSER~~kt~s~G~rlkEg~~INkSLlaLg~VI~aLs~~~k~~hIPYRDSKLTrLLqdSLGGNs 157 (783)
. ....++|+|||||||||..++++.|.+++|+.+||+||++|++||.+|+++ ..|||||+||||+||+|+|||||
T Consensus 217 ~---~~~~~kl~~vDLAGsEr~~~~~~~g~~~~E~~~iN~SL~~L~~vi~aL~~~--~~~ipyR~SkLT~lL~d~Lggns 291 (364)
T d1sdma_ 217 Q---AIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSG--NQHIPYRNHKLTMLMSDSLGGNA 291 (364)
T ss_dssp C---CEEEEEEEEEECCCCSCCCC---------CCCTTCHHHHHHHHHHHHHHHT--CSCCCGGGCHHHHHTTTTTTSSS
T ss_pred c---eeeeEEEEeechhhccccccccccCceeeeccccccchhhHHHHHHHHHcC--CCcCCchhhhhhHHHHhhcCCCc
Confidence 2 346789999999999999999999999999999999999999999999874 46999999999999999999999
Q ss_pred ccceEeccCCCCCCHHHHHHHHHHHHHhcccccccccccccCHHHHHHHHHHHHHHHHHHhc
Q 003967 158 RTAIICTISPALSHVEQTRNTLSFATSAKEVTNNAQVNMVVSDKRLVKQLQKEVARLEAELR 219 (783)
Q Consensus 158 kT~mIatVSPs~~~~eETLsTLrFAsRAk~Ikn~p~vN~~~s~~~lIk~Lq~EIa~Lk~eL~ 219 (783)
+|+|||||||+..+++||++||+||++|++|+|+|.+|+... .+.+|+++++.|+.++.
T Consensus 292 ~t~~I~~isp~~~~~~eTl~TL~fa~~ak~i~n~p~~n~~~~---~~~~l~~~i~~l~~~~~ 350 (364)
T d1sdma_ 292 KTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSSK---EVARLKKLVSYWKEQAG 350 (364)
T ss_dssp EEEEEEEECCBGGGHHHHHHHHHHHHHHTTCCCCCCCCEECH---HHHHHHTTTTCC-----
T ss_pred eEEEEEEeCCCcchHHHHHHHHHHHHHHhhcccCCcccCCHH---HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998742 35667777776666653
|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|