Citrus Sinensis ID: 003987
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 781 | 2.2.26 [Sep-21-2011] | |||||||
| O24301 | 809 | Sucrose synthase 2 OS=Pis | N/A | no | 0.960 | 0.927 | 0.852 | 0.0 | |
| Q9M111 | 809 | Sucrose synthase 3 OS=Ara | yes | no | 0.964 | 0.930 | 0.849 | 0.0 | |
| Q10LP5 | 809 | Sucrose synthase 4 OS=Ory | yes | no | 0.961 | 0.928 | 0.815 | 0.0 | |
| Q00917 | 807 | Sucrose synthase 2 OS=Ara | no | no | 0.955 | 0.924 | 0.774 | 0.0 | |
| Q42652 | 766 | Sucrose synthase (Fragmen | N/A | no | 0.887 | 0.904 | 0.815 | 0.0 | |
| Q41608 | 805 | Sucrose synthase 1 OS=Tul | N/A | no | 0.957 | 0.929 | 0.718 | 0.0 | |
| P13708 | 805 | Sucrose synthase OS=Glyci | no | no | 0.959 | 0.930 | 0.717 | 0.0 | |
| Q01390 | 805 | Sucrose synthase OS=Vigna | N/A | no | 0.959 | 0.930 | 0.714 | 0.0 | |
| P30298 | 808 | Sucrose synthase 2 OS=Ory | no | no | 0.955 | 0.923 | 0.708 | 0.0 | |
| P49036 | 816 | Sucrose synthase 2 OS=Zea | N/A | no | 0.955 | 0.914 | 0.712 | 0.0 |
| >sp|O24301|SUS2_PEA Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1365 bits (3533), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/750 (85%), Positives = 697/750 (92%)
Query: 4 PKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQN 63
PK +R+PSIR+RV+DTLS HRNEL+SLLSRYVAQGKGILQPH LIDELDNI G+D +
Sbjct: 5 PKFTRVPSIRDRVQDTLSAHRNELISLLSRYVAQGKGILQPHNLIDELDNILGEDHATLD 64
Query: 64 LRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEE 123
L++GPF ++I SAQEAIVLPPFVAIAVRPRPGVWEYVRVNV+ELSVEQLSVSEYL FKEE
Sbjct: 65 LKNGPFGQIINSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVFELSVEQLSVSEYLSFKEE 124
Query: 124 LVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDF 183
LV+ N+ +LELD EPFNA+FPRP RSSSIGNGVQFLNRHLSS+MFRNKDCLEPLLDF
Sbjct: 125 LVEGKSNDNIILELDLEPFNASFPRPTRSSSIGNGVQFLNRHLSSNMFRNKDCLEPLLDF 184
Query: 184 LRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWG 243
LR H YKGH LMLNDRIQSIS+LQS+L KAEDHLSKL PDT +S+FEY LQG GFE+GWG
Sbjct: 185 LRVHTYKGHALMLNDRIQSISKLQSALVKAEDHLSKLAPDTLYSEFEYELQGTGFERGWG 244
Query: 244 DTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGG 303
DTA VLEMMHLLLDILQAPDPSTLE FLGR+PMVFNVVILSPHG+FGQANVLGLPDTGG
Sbjct: 245 DTAARVLEMMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGFFGQANVLGLPDTGG 304
Query: 304 QVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTH 363
QVVYILDQVRALE+EML+RIK+QGLD +P+ILIVTRLIPDAKGTTCNQRLERVSGTE+TH
Sbjct: 305 QVVYILDQVRALESEMLVRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTEYTH 364
Query: 364 ILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVAS 423
ILRVPFRSEKGILR+WISRFDVWP+LETF EDV SEI AELQ +PDFIIGNYSDGNLVAS
Sbjct: 365 ILRVPFRSEKGILRKWISRFDVWPFLETFAEDVASEIAAELQCYPDFIIGNYSDGNLVAS 424
Query: 424 LLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483
LLAYKMG+TQCTIAHALEKTKYPDSDIYWKKF++KYHFSCQFTADLIAMNNADFIITSTY
Sbjct: 425 LLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNNADFIITSTY 484
Query: 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRL 543
QEIAGTKNT+GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYS+K+KRL
Sbjct: 485 QEIAGTKNTIGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSDKEKRL 544
Query: 544 TALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL 603
TALH SIE+LL+ EQ DE++G+L+DRSKPI+FSMARLD VKN+TGLVE Y KNS+LREL
Sbjct: 545 TALHSSIEKLLYGTEQTDEYIGSLTDRSKPIIFSMARLDRVKNITGLVESYAKNSKLREL 604
Query: 604 VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIA 663
VNLVVVAGYIDV KS DREEI EIEKMH+LMK Y L+G+FRWI AQTNRARNGELYRYIA
Sbjct: 605 VNLVVVAGYIDVKKSSDREEIEEIEKMHDLMKQYNLNGEFRWITAQTNRARNGELYRYIA 664
Query: 664 DTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAE 723
DTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQA+E
Sbjct: 665 DTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIEHGVSGFHIDPYHPDQASE 724
Query: 724 LMADFFGKCKENPSHWKKISDGGLKRIYER 753
L+ DFF +CKE+P+HW K+SDGGL+RIYER
Sbjct: 725 LLVDFFQRCKEDPNHWNKVSDGGLQRIYER 754
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Pisum sativum (taxid: 3888) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 3 |
| >sp|Q9M111|SUS3_ARATH Sucrose synthase 3 OS=Arabidopsis thaliana GN=SUS3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1361 bits (3523), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 640/753 (84%), Positives = 692/753 (91%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
MA PKL+R+ S R+RV+DTLS HRNELV+LLSRYV QGKGILQPH LIDEL+++ GDDE
Sbjct: 1 MANPKLTRVLSTRDRVQDTLSAHRNELVALLSRYVDQGKGILQPHNLIDELESVIGDDET 60
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
+++L DGPF E++KSA EAIV+PPFVA+AVRPRPGVWEYVRVNV+ELSVEQL+VSEYL F
Sbjct: 61 KKSLSDGPFGEILKSAMEAIVVPPFVALAVRPRPGVWEYVRVNVFELSVEQLTVSEYLRF 120
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KEELVD ++ F LELDFEPFNA PRP+RSSSIGNGVQFLNRHLSS MFRNKDCLEPL
Sbjct: 121 KEELVDGPNSDPFCLELDFEPFNANVPRPSRSSSIGNGVQFLNRHLSSVMFRNKDCLEPL 180
Query: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
LDFLR HKYKGH LMLNDRIQSISRLQ LSKAEDH+SKL +TPFS+FEY LQGMGFEK
Sbjct: 181 LDFLRVHKYKGHPLMLNDRIQSISRLQIQLSKAEDHISKLSQETPFSEFEYALQGMGFEK 240
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGDTA VLEMMHLL DILQAPDPS+LEKFLG +PMVFNVVILSPHGYFGQANVLGLPD
Sbjct: 241 GWGDTAGRVLEMMHLLSDILQAPDPSSLEKFLGMVPMVFNVVILSPHGYFGQANVLGLPD 300
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQVVYILDQVRALE EMLLRIKRQGLDISP ILIVTRLIPDAKGTTCNQRLERVSGTE
Sbjct: 301 TGGQVVYILDQVRALETEMLLRIKRQGLDISPSILIVTRLIPDAKGTTCNQRLERVSGTE 360
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
HTHILRVPFRSEKGILR+WISRFDVWPYLE + +D SEI ELQG PDFIIGNYSDGNL
Sbjct: 361 HTHILRVPFRSEKGILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYSDGNL 420
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASL+A++MG+TQCTIAHALEKTKYPDSDIYWK FD KYHFSCQFTADLIAMNNADFIIT
Sbjct: 421 VASLMAHRMGVTQCTIAHALEKTKYPDSDIYWKDFDNKYHFSCQFTADLIAMNNADFIIT 480
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
STYQEIAGTKNTVGQYESH AFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSE+
Sbjct: 481 STYQEIAGTKNTVGQYESHGAFTLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSEET 540
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
+RLTALHGSIE++L+ P+Q DEHVGTLSDRSKPI+FSMARLD VKN++GLVE Y KN++L
Sbjct: 541 RRLTALHGSIEEMLYSPDQTDEHVGTLSDRSKPILFSMARLDKVKNISGLVEMYSKNTKL 600
Query: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
RELVNLVV+AG IDVNKSKDREEI EIEKMH LMK YKLDGQFRWI AQTNRARNGELYR
Sbjct: 601 RELVNLVVIAGNIDVNKSKDREEIVEIEKMHNLMKNYKLDGQFRWITAQTNRARNGELYR 660
Query: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720
YIADT+GAF QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG SGFHIDPYHP+Q
Sbjct: 661 YIADTRGAFAQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGLSGFHIDPYHPEQ 720
Query: 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
A +MADFF +CKE+P+HWKK+SD GL+RIYER
Sbjct: 721 AGNIMADFFERCKEDPNHWKKVSDAGLQRIYER 753
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Modulates metabolic homeostasis and direct carbon towards starch synthesis in developing seeds. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|Q10LP5|SUS4_ORYSJ Sucrose synthase 4 OS=Oryza sativa subsp. japonica GN=SUS4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1315 bits (3404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/753 (81%), Positives = 687/753 (91%), Gaps = 2/753 (0%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
M+ PKL R PSIR+RVEDTL HRNELV+LLS+YV+QGKGILQPH ++D LD + G
Sbjct: 1 MSGPKLDRTPSIRDRVEDTLHAHRNELVALLSKYVSQGKGILQPHHILDALDEV--QSSG 58
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
+ L +GPF +V++SAQEAIVLPPFVAIAVRPRPGVWEYVRVNV+ELSVEQL+VSEYL F
Sbjct: 59 GRALVEGPFLDVLRSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVHELSVEQLTVSEYLRF 118
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KEELVD +N+ ++LELDFEPFNA+ PRPNRSSSIGNGVQFLNRHLSS MFRNKDCLEPL
Sbjct: 119 KEELVDGQYNDPYILELDFEPFNASVPRPNRSSSIGNGVQFLNRHLSSIMFRNKDCLEPL 178
Query: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
LDFLR H++KGH++MLNDRIQS+ RLQS L+KAE+HLSKLP DTP+SQF Y Q G EK
Sbjct: 179 LDFLRGHRHKGHVMMLNDRIQSLGRLQSVLTKAEEHLSKLPADTPYSQFAYKFQEWGLEK 238
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGDTA +VLEM+HLLLD+LQAPDPSTLE FLGR+PM+FNVV++SPHGYFGQANVLGLPD
Sbjct: 239 GWGDTAGYVLEMIHLLLDVLQAPDPSTLETFLGRIPMIFNVVVVSPHGYFGQANVLGLPD 298
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQ+VYILDQVRALENEM+LR+K+QGLD +PKILIVTRLIP+AKGT+CNQRLER+SGT+
Sbjct: 299 TGGQIVYILDQVRALENEMVLRLKKQGLDFTPKILIVTRLIPEAKGTSCNQRLERISGTQ 358
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
HT+ILRVPFR+E GILR+WISRFDVWPYLE F ED EI AELQG PDFIIGNYSDGNL
Sbjct: 359 HTYILRVPFRNENGILRKWISRFDVWPYLEKFAEDAAGEIAAELQGTPDFIIGNYSDGNL 418
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASLL+YKMGITQC IAHALEKTKYPDSDIYW K+DEKYHFSCQFTAD+IAMNNADFIIT
Sbjct: 419 VASLLSYKMGITQCNIAHALEKTKYPDSDIYWTKYDEKYHFSCQFTADIIAMNNADFIIT 478
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
STYQEIAG+KNTVGQYESHTAFTLPGLYR+VHGIDVFDPKFNIVSPGADM IYFPY+EK
Sbjct: 479 STYQEIAGSKNTVGQYESHTAFTLPGLYRIVHGIDVFDPKFNIVSPGADMSIYFPYTEKA 538
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
KRLT+LHGS+E L+ DPEQNDEH+G L DRSKPI+FSMARLD VKN+TGLVE Y KN++L
Sbjct: 539 KRLTSLHGSLENLISDPEQNDEHIGHLDDRSKPILFSMARLDRVKNITGLVEAYAKNARL 598
Query: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
RELVNLVVVAGY DV KSKDREEIAEIEKMHEL+KTY L GQFRWI+AQTNRARNGELYR
Sbjct: 599 RELVNLVVVAGYNDVKKSKDREEIAEIEKMHELIKTYNLFGQFRWISAQTNRARNGELYR 658
Query: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720
YIADT GAFVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ
Sbjct: 659 YIADTHGAFVQPAFYEAFGLTVVEAMTCGLPTFATVHGGPAEIIEHGISGFHIDPYHPDQ 718
Query: 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
AA L+ADFF +CK++P+HW ++S+ GL+RIYE+
Sbjct: 719 AANLIADFFEQCKQDPNHWVEVSNRGLQRIYEK 751
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|Q00917|SUS2_ARATH Sucrose synthase 2 OS=Arabidopsis thaliana GN=SUS2 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 1230 bits (3183), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/746 (77%), Positives = 653/746 (87%)
Query: 8 RIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDG 67
R ++RE V D +S RNEL+SL SRYVAQGKGILQ H LIDE D ++L
Sbjct: 5 RFETMREWVYDAISAQRNELLSLFSRYVAQGKGILQSHQLIDEFLKTVKVDGTLEDLNKS 64
Query: 68 PFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDA 127
PF +V++SA+EAIVLPPFVA+A+RPRPGV EYVRVNVYELSV+ L+VSEYL FKEELV+
Sbjct: 65 PFMKVLQSAEEAIVLPPFVALAIRPRPGVREYVRVNVYELSVDHLTVSEYLRFKEELVNG 124
Query: 128 SFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAH 187
N ++LELDFEPFNAT PRP RSSSIGNGVQFLNRHLSS MFRNK+ +EPLL+FLR H
Sbjct: 125 HANGDYLLELDFEPFNATLPRPTRSSSIGNGVQFLNRHLSSIMFRNKESMEPLLEFLRTH 184
Query: 188 KYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAE 247
K+ G +MLNDRIQ+I LQ +L++AE+ LSKLP TP+S+FE+ LQGMGFE+GWGDTA+
Sbjct: 185 KHDGRPMMLNDRIQNIPILQGALARAEEFLSKLPLATPYSEFEFELQGMGFERGWGDTAQ 244
Query: 248 HVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVY 307
V EM+HLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPDTGGQVVY
Sbjct: 245 KVSEMVHLLLDILQAPDPSVLETFLGRIPMVFNVVILSPHGYFGQANVLGLPDTGGQVVY 304
Query: 308 ILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRV 367
ILDQVRALENEMLLRI++QGL++ PKILIVTRL+P+AKGTTCNQRLERVSGTEH HILR+
Sbjct: 305 ILDQVRALENEMLLRIQKQGLEVIPKILIVTRLLPEAKGTTCNQRLERVSGTEHAHILRI 364
Query: 368 PFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAY 427
PFR+EKGILR+WISRFDVWPYLETF ED +EI+AELQG P+ IIGNYSDGNLVASLLA
Sbjct: 365 PFRTEKGILRKWISRFDVWPYLETFAEDASNEISAELQGVPNLIIGNYSDGNLVASLLAS 424
Query: 428 KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIA 487
K+G+ QC IAHALEKTKYP+SDIYW+ ++KYHFS QFTADLIAMNNADFIITSTYQEIA
Sbjct: 425 KLGVIQCNIAHALEKTKYPESDIYWRNHEDKYHFSSQFTADLIAMNNADFIITSTYQEIA 484
Query: 488 GTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH 547
G+KN VGQYESHTAFT+PGLYRVVHGIDVFDPKFNIVSPGADM IYFPYS+K++RLTALH
Sbjct: 485 GSKNNVGQYESHTAFTMPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSDKERRLTALH 544
Query: 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLV 607
SIE+LLF EQNDEHVG LSD+SKPI+FSMARLD VKN+TGLVECY KNS+LREL NLV
Sbjct: 545 ESIEELLFSAEQNDEHVGLLSDQSKPIIFSMARLDRVKNLTGLVECYAKNSKLRELANLV 604
Query: 608 VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG 667
+V GYID N+S+DREE+AEI+KMH L++ Y L G+FRWIAAQ NRARNGELYRYIADTKG
Sbjct: 605 IVGGYIDENQSRDREEMAEIQKMHSLIEQYDLHGEFRWIAAQMNRARNGELYRYIADTKG 664
Query: 668 AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 727
FVQPAFYEAFGLTVVE+MTC LPTFATCHGGPAEIIE+G SGFHIDPYHPDQ A +
Sbjct: 665 VFVQPAFYEAFGLTVVESMTCALPTFATCHGGPAEIIENGVSGFHIDPYHPDQVAATLVS 724
Query: 728 FFGKCKENPSHWKKISDGGLKRIYER 753
FF C NP+HW KIS+GGLKRIYER
Sbjct: 725 FFETCNTNPNHWVKISEGGLKRIYER 750
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|Q42652|SUSY_BETVU Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1200 bits (3105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/695 (81%), Positives = 626/695 (90%), Gaps = 2/695 (0%)
Query: 60 GRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLH 119
G+Q L DGPFSEV++SAQEAIV+PPFVAIAVRPRPGVWEYVRVNV EL+VEQL+VSEYLH
Sbjct: 3 GKQILSDGPFSEVLRSAQEAIVVPPFVAIAVRPRPGVWEYVRVNVSELNVEQLTVSEYLH 62
Query: 120 FKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEP 179
FKEELVD ++ +VLELDFEPFN + PRP RSSSIGNGVQFLNRHLSSSMF NKDCLEP
Sbjct: 63 FKEELVDGKADDHYVLELDFEPFNESVPRPTRSSSIGNGVQFLNRHLSSSMFCNKDCLEP 122
Query: 180 LLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFE 239
LLDFLR HK+KG ++MLNDRIQ+I RLQS+LSKAED+L KLP DTP+S+FE+V+QGMGFE
Sbjct: 123 LLDFLRVHKHKGVVMMLNDRIQTIQRLQSALSKAEDYLIKLPADTPYSEFEFVIQGMGFE 182
Query: 240 KGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLP 299
+GWGDTAE VLEMMHLLLDILQAPDPSTLE FLGRLPMVFNVVILS HGYFGQA+VLGLP
Sbjct: 183 RGWGDTAERVLEMMHLLLDILQAPDPSTLETFLGRLPMVFNVVILSVHGYFGQAHVLGLP 242
Query: 300 DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359
DTGGQ+VYILDQVR+LE+EML RIK+QGLD++P+ILIV+RLIPDAKGTTCNQR+E+VSGT
Sbjct: 243 DTGGQIVYILDQVRSLEHEMLQRIKKQGLDVTPRILIVSRLIPDAKGTTCNQRMEKVSGT 302
Query: 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN 419
EH ILRVPFRSEKGILR+WISRFDVWPYLETFTED EI ELQG PD IIGNYSDGN
Sbjct: 303 EHASILRVPFRSEKGILRKWISRFDVWPYLETFTEDAAGEIIGELQGRPDLIIGNYSDGN 362
Query: 420 LVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII 479
+VASLL++KMG+TQC IAHALEKTKYPDSDIYWK+F++KYHFSCQF+ADL+AMN+ADFII
Sbjct: 363 IVASLLSHKMGVTQCNIAHALEKTKYPDSDIYWKRFEDKYHFSCQFSADLMAMNHADFII 422
Query: 480 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK 539
TSTYQEIAGTKNTVGQYESH AFT PGLYRVVHGIDVFDPKFNIVSPGADM IYFP+SEK
Sbjct: 423 TSTYQEIAGTKNTVGQYESHKAFTFPGLYRVVHGIDVFDPKFNIVSPGADMAIYFPFSEK 482
Query: 540 Q-KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598
LT+LH IEQLLF PEQN+EH+G L D SKPI+FSMARLD VKN+TGLVECYGKN+
Sbjct: 483 DVTCLTSLHRLIEQLLFKPEQNEEHIGVLDDTSKPIIFSMARLDRVKNITGLVECYGKNA 542
Query: 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGEL 658
+LREL NLVVVAGY DV KS DREEIAEIEKMH L++ Y L GQFRWIA+QTNR RNGEL
Sbjct: 543 KLRELANLVVVAGYNDVKKSNDREEIAEIEKMHRLIQEYNLRGQFRWIASQTNRVRNGEL 602
Query: 659 YRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718
YRYI D G F QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIE G SGFHIDPYH
Sbjct: 603 YRYICDKGGIFAQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEDGVSGFHIDPYHA 662
Query: 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
DQ AE M +FF KC+E+P++W KIS GGL RI ER
Sbjct: 663 DQ-AEKMTEFFVKCREDPNYWTKISAGGLLRIKER 696
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Beta vulgaris (taxid: 161934) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|Q41608|SUS1_TULGE Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1145 bits (2961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/754 (71%), Positives = 643/754 (85%), Gaps = 6/754 (0%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
M +L+RI SI+ER+ D+LS H NEL++L SR++ QGKG+L+ H L+ E +++ + +
Sbjct: 1 MTERRLTRIHSIKERLGDSLSHHPNELLALFSRFIKQGKGMLERHQLLTEYESVIPEAD- 59
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
R+ L+DG F + ++++QEAIV+PP+VA+A+RPRPGVWEYVRVNV EL+VE+ SEYL F
Sbjct: 60 REKLKDGVFEDTLRASQEAIVIPPWVALAIRPRPGVWEYVRVNVNELAVEE--CSEYLKF 117
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KE+LVD S FVLE+DFEPFNA PRP+ S SIGNGVQFLNRHLSS +F +K+ L PL
Sbjct: 118 KEDLVDRSSQSNFVLEMDFEPFNANVPRPSLSKSIGNGVQFLNRHLSSKLFHDKESLYPL 177
Query: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
L+FLR H YKG LMLNDR+QS+S LQ++L KA+ +L + DTP+S+F + Q +G EK
Sbjct: 178 LNFLREHNYKGTTLMLNDRLQSLSALQTALRKADRYLLSISKDTPYSEFNHSFQVLGLEK 237
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGDTA V E +HLLLD+L+APDPSTLEKFLG +PMVFNVVILSPHGYF QANVLG PD
Sbjct: 238 GWGDTASRVSENIHLLLDLLEAPDPSTLEKFLGTIPMVFNVVILSPHGYFAQANVLGYPD 297
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQVVYILDQVRALE EMLL+IK+QGLDI+P+ILIVTRL+PDA GTTC QRLERV GTE
Sbjct: 298 TGGQVVYILDQVRALETEMLLKIKQQGLDITPRILIVTRLLPDAVGTTCGQRLERVLGTE 357
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
HTHILRVPFR++KGILR+WISRF+VWPYLET+ EDV E+ E+Q PD IIGNYSDGNL
Sbjct: 358 HTHILRVPFRTDKGILRKWISRFEVWPYLETYAEDVAHELAGEMQATPDLIIGNYSDGNL 417
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASLLA+++GITQCTIAHALEKTKYP+SDIY KKFD++YHFSCQFTADLIAMN +DFIIT
Sbjct: 418 VASLLAHRLGITQCTIAHALEKTKYPNSDIYLKKFDDQYHFSCQFTADLIAMNQSDFIIT 477
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
ST+QEIAG+K+TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IY+PY E++
Sbjct: 478 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYYPYFEQE 537
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
KRLTALH IE+LL+ +N+EH L DR+KPI+FSMARLD VKNMTGLVE YGKN +L
Sbjct: 538 KRLTALHAEIEELLYSSVENEEHKFVLKDRNKPIIFSMARLDRVKNMTGLVELYGKNDRL 597
Query: 601 RELVNLVVVAGYIDVNK-SKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELY 659
+ELVNLVVVAG D K SKD EE AE++KM++L++ YKL G RWI+AQ NR RNGELY
Sbjct: 598 KELVNLVVVAG--DHGKESKDLEEQAELKKMYKLIEEYKLQGHIRWISAQMNRVRNGELY 655
Query: 660 RYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 719
RYIADTKGAFVQPAFYEAFGLTVVE+MTCGLPTFATCHGGPAEII HG SGFHIDPYH D
Sbjct: 656 RYIADTKGAFVQPAFYEAFGLTVVESMTCGLPTFATCHGGPAEIIVHGVSGFHIDPYHGD 715
Query: 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
+A+E + FF KCKE+P+HW+KIS GGL+RIYE+
Sbjct: 716 KASEQLVSFFEKCKEDPAHWEKISQGGLQRIYEK 749
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Tulipa gesneriana (taxid: 13306) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P13708|SUSY_SOYBN Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1144 bits (2958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/754 (71%), Positives = 640/754 (84%), Gaps = 5/754 (0%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
MA +L+R+ S+RER+++TL+ +RNE+++LLSR A+GKGILQ H +I E + I +E
Sbjct: 1 MATDRLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEI--PEEN 58
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
RQ L DG F EV++S QEAIVLPP+VA+AVRPRPGVWEY+RVNV+ L VE+L +EYLHF
Sbjct: 59 RQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEELQPAEYLHF 118
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KEELVD S N FVLELDFEPFNA FPRP + SIGNGVQFLNRHLS+ +F +K+ L PL
Sbjct: 119 KEELVDGSSNGNFVLELDFEPFNAAFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPL 178
Query: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
L+FLR H KG LMLNDRIQ+ LQ L KAE++L +PP+TP+S+FE+ Q +G E+
Sbjct: 179 LEFLRLHSVKGKTLMLNDRIQNPDALQHVLRKAEEYLGTVPPETPYSEFEHKFQEIGLER 238
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGD AE VLE + LLLD+L+APDP TLE FLGR+PMVFNVVILSPHGYF Q NVLG PD
Sbjct: 239 GWGDNAERVLESIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPD 298
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQVVYILDQVRALENEML RIK+QGLDI P+ILI+TRL+PDA GTTC QRLE+V GTE
Sbjct: 299 TGGQVVYILDQVRALENEMLHRIKQQGLDIVPRILIITRLLPDAVGTTCGQRLEKVFGTE 358
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
H+HILRVPFR+EKGI+R+WISRF+VWPYLET+TEDV E+ ELQG PD I+GNYSDGN+
Sbjct: 359 HSHILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNI 418
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASLLA+K+G+TQCTIAHALEKTKYP+SDIYWKK +E+YHFSCQFTADL AMN+ DFIIT
Sbjct: 419 VASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKLEERYHFSCQFTADLFAMNHTDFIIT 478
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
ST+QEIAG+K+TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD IYFP++E
Sbjct: 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPHTETS 538
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
+RLT+ H IE+LL+ +N+EH+ L DRSKPI+F+MARLD VKN+TGLVE YGKN++L
Sbjct: 539 RRLTSFHPEIEELLYSSVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNAKL 598
Query: 601 RELVNLVVVAGYIDVNK-SKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELY 659
RELVNLVVVAG D K SKD EE AE++KM+ L++TYKL+GQFRWI++Q NR RNGELY
Sbjct: 599 RELVNLVVVAG--DRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELY 656
Query: 660 RYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 719
R I DT+GAFVQPA YEAFGLTVVEAMTCGLPTFATC+GGPAEII HG SGFHIDPYH D
Sbjct: 657 RVICDTRGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGD 716
Query: 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
+AA+L+ DFF KCK +P+HW KIS GL+RI E+
Sbjct: 717 RAADLLVDFFEKCKLDPTHWDKISKAGLQRIEEK 750
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Glycine max (taxid: 3847) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|Q01390|SUSY_VIGRR Sucrose synthase OS=Vigna radiata var. radiata GN=SS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1134 bits (2933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/754 (71%), Positives = 635/754 (84%), Gaps = 5/754 (0%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
MA +L+R+ S+RER+++TLS +RNE+++LLSR +GKGILQ H +I E + I +E
Sbjct: 1 MATDRLTRVHSLRERLDETLSANRNEILALLSRIEGKGKGILQHHQVIAEFEEI--PEES 58
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
RQ L DG F EV++S QEAIVLPP+VA+AVRPRPGVWEY+RVNV+ L VE L +EYL F
Sbjct: 59 RQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEVLQPAEYLRF 118
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KEELVD S N FVLELDFEPF A+FPRP + SIGNGVQFLNRHLS+ +F +K+ L PL
Sbjct: 119 KEELVDGSSNGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPL 178
Query: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
L+FLR H KG LMLNDRIQ+ LQ L KAE++L +PP+TP+S FE+ Q +G E+
Sbjct: 179 LEFLRLHSVKGKTLMLNDRIQNPDALQHVLRKAEEYLGTVPPETPYSAFEHKFQEIGLER 238
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGD AE VLE + LLLD+L+APDP TLE FLGR+PMVFNVVILSPHGYF Q NVLG PD
Sbjct: 239 GWGDNAERVLESIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPD 298
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQVVYILDQVRALENEML RIK+QGLDI P+ILI+TRL+PDA GTTC QRLE+V GTE
Sbjct: 299 TGGQVVYILDQVRALENEMLHRIKQQGLDIVPRILIITRLLPDAVGTTCGQRLEKVFGTE 358
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
H+HILRVPFR+E GI+R+WISRF+VWPYLET+TEDV E+ ELQG PD I+GNYSDGN+
Sbjct: 359 HSHILRVPFRTENGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNI 418
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASLLA+K+G+TQCTIAHALEKTKYP+SDIYWKK +E+YHFSCQFTADL AMN+ DFIIT
Sbjct: 419 VASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKLEERYHFSCQFTADLFAMNHTDFIIT 478
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
ST+QEIAG+K+TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD IYFP++E
Sbjct: 479 STFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPHTETS 538
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
+RLT+ H IE+LL+ +N+EH+ L DRSKPI+F+MARLD VKN+TGLVE YGKN++L
Sbjct: 539 RRLTSFHTEIEELLYSSVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNAKL 598
Query: 601 RELVNLVVVAGYIDVNK-SKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELY 659
RELVNLVVVAG D K SKD EE AE++KM+ L++TYKL+GQFRWI++Q NR RNGELY
Sbjct: 599 RELVNLVVVAG--DRRKESKDLEEKAEMKKMYSLIETYKLNGQFRWISSQMNRVRNGELY 656
Query: 660 RYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 719
R IADTKGAFVQPA YEAFGLTVVEAMTCGLPTFATC+GGPAEII HG SGFHIDPYH D
Sbjct: 657 RVIADTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGD 716
Query: 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
+AA+L+ +FF K K +PSHW KIS GL+RI E+
Sbjct: 717 RAADLLVEFFEKVKVDPSHWDKISQAGLQRIEEK 750
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Vigna radiata var. radiata (taxid: 3916) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P30298|SUS2_ORYSJ Sucrose synthase 2 OS=Oryza sativa subsp. japonica GN=SUS2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1132 bits (2927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/751 (70%), Positives = 631/751 (84%), Gaps = 5/751 (0%)
Query: 3 APKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQ 62
A KL+R+ S+RER+ T S H NEL++L SRYV QGKG+LQ H L+ E D + D+ +
Sbjct: 2 AAKLARLHSLRERLGATFSSHPNELIALFSRYVNQGKGMLQRHQLLAEFDALIEADKEKY 61
Query: 63 NLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKE 122
PF +++++AQEAIVLPP+VA+A+RPRPGVW+Y+RVNV EL+VE+LSVSEYL FKE
Sbjct: 62 ----APFEDILRAAQEAIVLPPWVALAIRPRPGVWDYIRVNVSELAVEELSVSEYLAFKE 117
Query: 123 ELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLD 182
+LVD N FVLELDFEPFNA+FPRP+ S SIGNGVQFLNRHLSS +F++K+ L PLL+
Sbjct: 118 QLVDGHTNSNFVLELDFEPFNASFPRPSMSKSIGNGVQFLNRHLSSKLFQDKESLYPLLN 177
Query: 183 FLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGW 242
FL+AH +KG +MLNDRIQS+ LQSSL KAE++L +P DTP+S+F + Q +G EKGW
Sbjct: 178 FLKAHNHKGTTMMLNDRIQSLRGLQSSLRKAEEYLMGIPQDTPYSEFNHRFQELGLEKGW 237
Query: 243 GDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTG 302
GD A+ VL+ +HLLLD+L+APDP+ LEKFLG +PM+FNVVILSPHGYF Q+NVLG PDTG
Sbjct: 238 GDCAKRVLDTIHLLLDLLEAPDPANLEKFLGTIPMMFNVVILSPHGYFAQSNVLGYPDTG 297
Query: 303 GQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHT 362
GQVVYILDQVRALENEMLLRIK+QGLDI+PKILIVTRL+PDA GTTC QR+E+V GTEHT
Sbjct: 298 GQVVYILDQVRALENEMLLRIKQQGLDITPKILIVTRLLPDAVGTTCGQRVEKVIGTEHT 357
Query: 363 HILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVA 422
ILRVPFRSE GILR+WISRFDVWP+LET+TEDV +EI E+Q PD IIGNYSDGNLVA
Sbjct: 358 DILRVPFRSENGILRKWISRFDVWPFLETYTEDVANEIMREMQAKPDLIIGNYSDGNLVA 417
Query: 423 SLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482
+LLA+K+G+TQCTIAHALEKTKYP+SDIY KFD +YHFSCQFTADLIAMN+ DFIITST
Sbjct: 418 TLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQYHFSCQFTADLIAMNHTDFIITST 477
Query: 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKR 542
+QEIAG+K+TVGQYESH AFTLPGLYRVVHGIDVFDPKFNIVSPGADM +YFPY+E KR
Sbjct: 478 FQEIAGSKDTVGQYESHIAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSVYFPYTEADKR 537
Query: 543 LTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE 602
LTA H IE+LL+ +NDEH L D++KPI+FSMARLD VKNMTGLVE YGKN+ LR+
Sbjct: 538 LTAFHPEIEELLYSEVENDEHKFVLKDKNKPIIFSMARLDRVKNMTGLVEMYGKNAHLRD 597
Query: 603 LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 662
L NLV+V G N+SKDREE AE +KM+ L+ YKL G RWI+AQ NR RNGELYRYI
Sbjct: 598 LANLVIVCG-DHGNQSKDREEQAEFKKMYGLIDQYKLKGHIRWISAQMNRVRNGELYRYI 656
Query: 663 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAA 722
DTKG FVQPAFYEAFGLTV+EAMTCGLPT ATCHGGPAEII G SG HIDPYH D+AA
Sbjct: 657 CDTKGVFVQPAFYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAA 716
Query: 723 ELMADFFGKCKENPSHWKKISDGGLKRIYER 753
+++ +FF KCK++ ++W IS GGL+RIYE+
Sbjct: 717 DILVNFFEKCKQDSTYWDNISQGGLQRIYEK 747
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
| >sp|P49036|SUS2_MAIZE Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1130 bits (2923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/748 (71%), Positives = 628/748 (83%), Gaps = 2/748 (0%)
Query: 6 LSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLR 65
LSR+ S+RER+ D+LS H NELV++ +R GKG+LQPH +I E +N + E R+ L+
Sbjct: 10 LSRLHSVRERIGDSLSAHPNELVAVFTRLKNLGKGMLQPHQIIAEYNNAIPEAE-REKLK 68
Query: 66 DGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELV 125
DG F +V+++AQEAIV+PP+VA+A+RPRPGVWEYVRVNV EL+VE+L V EYL FKE+LV
Sbjct: 69 DGAFEDVLRAAQEAIVIPPWVALAIRPRPGVWEYVRVNVSELAVEELRVPEYLQFKEQLV 128
Query: 126 DASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLR 185
+ N FVLELDFEPFNA+FPRP+ S SIGNGVQFLNRHLSS +F +K+ + PLL+FLR
Sbjct: 129 EEGPNNNFVLELDFEPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESMYPLLNFLR 188
Query: 186 AHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDT 245
AH YKG +MLNDRI+S+S LQ +L KAE+HLS L DTP+S+F + Q +G EKGWGD
Sbjct: 189 AHNYKGMTMMLNDRIRSLSALQGALRKAEEHLSTLQADTPYSEFHHRFQELGLEKGWGDC 248
Query: 246 AEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQV 305
A+ E +HLLLD+L+APDPSTLEKFLG +PMVFNVVILSPHGYF QANVLG PDTGGQV
Sbjct: 249 AKRAQETIHLLLDLLEAPDPSTLEKFLGTIPMVFNVVILSPHGYFAQANVLGYPDTGGQV 308
Query: 306 VYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHIL 365
VYILDQVRA+ENEMLLRIK+ GLDI+PKILIVTRL+PDA GTTC QRLE+V GTEH HIL
Sbjct: 309 VYILDQVRAMENEMLLRIKQCGLDITPKILIVTRLLPDATGTTCGQRLEKVLGTEHCHIL 368
Query: 366 RVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLL 425
RVPFR+E GI+R+WISRF+VWPYLET+T+DV EI ELQ PD IIGNYSDGNLVA LL
Sbjct: 369 RVPFRTENGIVRKWISRFEVWPYLETYTDDVAHEIAGELQANPDLIIGNYSDGNLVACLL 428
Query: 426 AYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485
A+KMG+T CTIAHALEKTKYP+SD+YWKKF++ YHFSCQFT DLIAMN+ADFIITST+QE
Sbjct: 429 AHKMGVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQE 488
Query: 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTA 545
IAG K+TVGQYESH AFT+PGLYRVVHGIDVFDPKFNIVSPGAD+ IYFPY+E KRLT+
Sbjct: 489 IAGNKDTVGQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADLSIYFPYTESHKRLTS 548
Query: 546 LHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVN 605
LH IE+LL+ +N EH L+DR+KPI+FSMARLD VKN+TGLVE YG+N +L+ELVN
Sbjct: 549 LHPEIEELLYSQTENTEHKFVLNDRNKPIIFSMARLDRVKNLTGLVELYGRNKRLQELVN 608
Query: 606 LVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT 665
LVVV G N SKD+EE AE +KM +L++ Y L+G RWI+AQ NR RNGELYRYI DT
Sbjct: 609 LVVVCG-DHGNPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDT 667
Query: 666 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELM 725
KGAFVQPAFYEAFGLTVVEAMTCGLPTFAT +GGPAEII HG SG+HIDPY D+A+ L+
Sbjct: 668 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATAYGGPAEIIVHGVSGYHIDPYQGDKASALL 727
Query: 726 ADFFGKCKENPSHWKKISDGGLKRIYER 753
DFF KC+ PSHW KIS GGL+RI E+
Sbjct: 728 VDFFDKCQAEPSHWSKISQGGLQRIEEK 755
|
Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Zea mays (taxid: 4577) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 781 | ||||||
| 6682841 | 811 | sucrose synthase [Citrus unshiu] | 0.964 | 0.928 | 0.997 | 0.0 | |
| 6682995 | 811 | sucrose synthase [Citrus unshiu] | 0.964 | 0.928 | 0.994 | 0.0 | |
| 399138446 | 819 | sucrose synthase [Litchi chinensis] | 0.964 | 0.919 | 0.911 | 0.0 | |
| 345104535 | 809 | sucrose synthase SusA1 [Gossypium darwin | 0.964 | 0.930 | 0.880 | 0.0 | |
| 345104531 | 809 | sucrose synthase SusA1 [Gossypium mustel | 0.964 | 0.930 | 0.879 | 0.0 | |
| 345104539 | 809 | sucrose synthase SusA1 [Gossypium toment | 0.964 | 0.930 | 0.879 | 0.0 | |
| 359359016 | 809 | sucrose synthase [Gossypium herbaceum] | 0.964 | 0.930 | 0.879 | 0.0 | |
| 345104559 | 809 | sucrose synthase SusA1 [Gossypium davids | 0.964 | 0.930 | 0.877 | 0.0 | |
| 345104529 | 809 | sucrose synthase SusA1 [Gossypium turner | 0.964 | 0.930 | 0.877 | 0.0 | |
| 345104543 | 809 | sucrose synthase SusA1 [Gossypium barbad | 0.964 | 0.930 | 0.877 | 0.0 |
| >gi|6682841|dbj|BAA88904.1| sucrose synthase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 1565 bits (4051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 751/753 (99%), Positives = 753/753 (100%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG
Sbjct: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF
Sbjct: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KEELVDA+FNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL
Sbjct: 121 KEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
Query: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK
Sbjct: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD
Sbjct: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE
Sbjct: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL
Sbjct: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT
Sbjct: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ
Sbjct: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS+L
Sbjct: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSRL 600
Query: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR
Sbjct: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
Query: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720
YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ
Sbjct: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720
Query: 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
AAELMADFFGKCKENPSHWKKISDGGLKRIYER
Sbjct: 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
|
Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6682995|dbj|BAA88981.1| sucrose synthase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 1560 bits (4040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 749/753 (99%), Positives = 752/753 (99%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG
Sbjct: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF
Sbjct: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL
Sbjct: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
Query: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK
Sbjct: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD
Sbjct: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE
Sbjct: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
HTHILRVPFRSEKGILRQWIS+FDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL
Sbjct: 361 HTHILRVPFRSEKGILRQWISKFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT
Sbjct: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNI SPGADMDIYFPYSEKQ
Sbjct: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIASPGADMDIYFPYSEKQ 540
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
KRLTALHGSIEQLLFDPEQNDEHVGTLSD+SKPIVFSMARLDHVKNMTGLVECYGKNS+L
Sbjct: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDQSKPIVFSMARLDHVKNMTGLVECYGKNSRL 600
Query: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR
Sbjct: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
Query: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720
YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ
Sbjct: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720
Query: 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
AAELMADFFGKCKENPSHWKKISDGGLKRIYER
Sbjct: 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
|
Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|399138446|gb|AFP23359.1| sucrose synthase [Litchi chinensis] | Back alignment and taxonomy information |
|---|
Score = 1448 bits (3749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 686/753 (91%), Positives = 719/753 (95%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
MA PKL+R+PSIR+RVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDEL+N+ G+DE
Sbjct: 1 MANPKLARMPSIRDRVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELENVIGEDEA 60
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
R+ LRD PFSE++++AQEAIVLPPFVAIAVRPRPGVWE+VRVNV+ELSVEQLSVSEYLHF
Sbjct: 61 RKQLRDDPFSEILRAAQEAIVLPPFVAIAVRPRPGVWEFVRVNVHELSVEQLSVSEYLHF 120
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KE LVD + N FVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSS MFRNKD LEPL
Sbjct: 121 KEALVDGTSNNGFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSIMFRNKDSLEPL 180
Query: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
LDFLR HKYKG LMLNDRIQSISRLQS L+KAEDHLSKLPPDTP+ +FEYVLQGMGFEK
Sbjct: 181 LDFLRVHKYKGQALMLNDRIQSISRLQSVLAKAEDHLSKLPPDTPYPEFEYVLQGMGFEK 240
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGDTAEHVLEM+HLL DILQAPDPSTLE FLGR+PMVFNVVILSPHGYFGQANVLGLPD
Sbjct: 241 GWGDTAEHVLEMIHLLSDILQAPDPSTLETFLGRVPMVFNVVILSPHGYFGQANVLGLPD 300
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQ+VYILDQVRALENEML RIK+QGLDI+PKILIVTRLIPDAKGTTCNQRLERV GTE
Sbjct: 301 TGGQIVYILDQVRALENEMLFRIKKQGLDIAPKILIVTRLIPDAKGTTCNQRLERVGGTE 360
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
HTHILRVPFRS+KGILR+WISRFDVWPYLETF EDV SEITAELQ FPDFIIGNYSDGNL
Sbjct: 361 HTHILRVPFRSDKGILRKWISRFDVWPYLETFAEDVASEITAELQAFPDFIIGNYSDGNL 420
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASLLAYKMG+TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT
Sbjct: 421 VASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ
Sbjct: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
KRLTALHGSIE LLFDPEQ DEHVGTL DRSKPI+FSMARLDHVKNMTGLVECYGKN++L
Sbjct: 541 KRLTALHGSIEALLFDPEQTDEHVGTLKDRSKPIIFSMARLDHVKNMTGLVECYGKNARL 600
Query: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
RELVNLVVVAGYIDV+KSKDREEIAEIEKMH+LMKTY LDGQFRWI+AQTNRARNGELYR
Sbjct: 601 RELVNLVVVAGYIDVSKSKDREEIAEIEKMHDLMKTYNLDGQFRWISAQTNRARNGELYR 660
Query: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720
YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ
Sbjct: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPDQ 720
Query: 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
AELMADFF KCKE+PSHW KISD GL+RIYER
Sbjct: 721 TAELMADFFQKCKEDPSHWHKISDAGLRRIYER 753
|
Source: Litchi chinensis Species: Litchi chinensis Genus: Litchi Family: Sapindaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104535|gb|AEN71089.1| sucrose synthase SusA1 [Gossypium darwinii] gi|345104547|gb|AEN71095.1| sucrose synthase SusA1 [Gossypium barbadense var. peruvianum] gi|374252532|gb|AEZ00743.1| SusA1 [Gossypium barbadense] | Back alignment and taxonomy information |
|---|
Score = 1405 bits (3638), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/753 (88%), Positives = 706/753 (93%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
MA PKL R PS+R+RVEDTLS HRNELV+LLSRYVAQGKGILQPH LIDEL+N+ GDD+
Sbjct: 1 MANPKLGRSPSMRDRVEDTLSAHRNELVALLSRYVAQGKGILQPHTLIDELENVVGDDKA 60
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
R+ L DGPFSEV+KSAQEAI+LPP+VAIAVRPRPGVWEYVRVNV+ELSVEQL VSEYL F
Sbjct: 61 REKLSDGPFSEVLKSAQEAIILPPYVAIAVRPRPGVWEYVRVNVHELSVEQLDVSEYLRF 120
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KE L D + FVLELDFEPFNA+FPRPNRSSSIGNGVQFLNRHLSS+MFRNKD LEPL
Sbjct: 121 KEALADVGEDNHFVLELDFEPFNASFPRPNRSSSIGNGVQFLNRHLSSNMFRNKDSLEPL 180
Query: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
L+FLRAHKYKGH LMLNDRIQSI RLQ++L+KAEDHL+KL PD P+S+FEY LQGMGFE+
Sbjct: 181 LNFLRAHKYKGHALMLNDRIQSIPRLQAALAKAEDHLAKLSPDAPYSEFEYELQGMGFER 240
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGDTA HVLE MHLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPD
Sbjct: 241 GWGDTAAHVLETMHLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPD 300
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQVVYILDQVRALENEMLLRIKRQGLDI+P+ILIVTRLIPDAKGT+CNQRLERVSGTE
Sbjct: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDITPRILIVTRLIPDAKGTSCNQRLERVSGTE 360
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
HTHILRVPFRSE G+LR+WISRFDVWPYLET+ EDV SEI AELQG PDFIIGNYSDGNL
Sbjct: 361 HTHILRVPFRSEHGVLRKWISRFDVWPYLETYAEDVASEIAAELQGIPDFIIGNYSDGNL 420
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASLLAYKMG+TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT
Sbjct: 421 VASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSEK+
Sbjct: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSEKE 540
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
KRLTALHGSIE+LLFDP+QNDEH+GTLSDRSKP++FSMARLD VKNMTGLVE Y KN++L
Sbjct: 541 KRLTALHGSIEELLFDPKQNDEHIGTLSDRSKPLIFSMARLDRVKNMTGLVELYAKNNKL 600
Query: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
REL NLVVVAGYIDV KSKDREEIAEIEKMH+LMK YKLDGQFRWIAAQTNRARNGELYR
Sbjct: 601 RELANLVVVAGYIDVKKSKDREEIAEIEKMHDLMKEYKLDGQFRWIAAQTNRARNGELYR 660
Query: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720
YIAD+KG FVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ
Sbjct: 661 YIADSKGIFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPDQ 720
Query: 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
AEL+A FF +CKE+PSHW KISDGGLKRIYER
Sbjct: 721 TAELLATFFERCKEDPSHWTKISDGGLKRIYER 753
|
Source: Gossypium darwinii Species: Gossypium darwinii Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104531|gb|AEN71087.1| sucrose synthase SusA1 [Gossypium mustelinum] | Back alignment and taxonomy information |
|---|
Score = 1404 bits (3635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 662/753 (87%), Positives = 706/753 (93%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
MA PKL R PS+R+RVEDTLS HRNELV+LLSRYVAQGKGILQPH LIDEL+N+ GDD+
Sbjct: 1 MANPKLGRSPSMRDRVEDTLSAHRNELVALLSRYVAQGKGILQPHTLIDELENVVGDDKA 60
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
R+ L DGPFSEV+KSAQEAI+LPP+VAIA+RPRPGVWEYVRVNV+ELSVEQL VSEYL F
Sbjct: 61 REKLSDGPFSEVLKSAQEAIILPPYVAIAIRPRPGVWEYVRVNVHELSVEQLDVSEYLRF 120
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KE L D + FVLELDFEPFNA+FPRPNRSSSIGNGVQFLNRHLSS+MFRNKD LEPL
Sbjct: 121 KEALADVGEDNHFVLELDFEPFNASFPRPNRSSSIGNGVQFLNRHLSSNMFRNKDSLEPL 180
Query: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
L+FLRAHKYKGH LMLNDRIQSI RLQ++L+KAEDHL+KL PD P+S+FEY LQGMGFE+
Sbjct: 181 LNFLRAHKYKGHALMLNDRIQSIPRLQAALAKAEDHLAKLSPDAPYSEFEYELQGMGFER 240
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGDTA HVLE MHLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPD
Sbjct: 241 GWGDTAAHVLETMHLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPD 300
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQVVYILDQVRALENEMLLRIKRQGLDI+P+ILIVTRLIPDAKGT+CNQRLERVSGTE
Sbjct: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDITPRILIVTRLIPDAKGTSCNQRLERVSGTE 360
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
HTHILRVPFRSE G+LR+WISRFDVWPYLET+ EDV SEI AELQG PDFIIGNYSDGNL
Sbjct: 361 HTHILRVPFRSEHGVLRKWISRFDVWPYLETYAEDVASEIAAELQGIPDFIIGNYSDGNL 420
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASLLAYKMG+TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT
Sbjct: 421 VASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSEK+
Sbjct: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSEKE 540
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
KRLTALHGSIE+LLFDP+QNDEH+GTLSDRSKP++FSMARLD VKNMTGLVE Y KN++L
Sbjct: 541 KRLTALHGSIEELLFDPKQNDEHIGTLSDRSKPLIFSMARLDRVKNMTGLVELYAKNNKL 600
Query: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
REL NLVVVAGYIDV KSKDREEIAEIEKMH+LMK YKLDGQFRWIAAQTNRARNGELYR
Sbjct: 601 RELANLVVVAGYIDVKKSKDREEIAEIEKMHDLMKEYKLDGQFRWIAAQTNRARNGELYR 660
Query: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720
YIAD+KG FVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ
Sbjct: 661 YIADSKGIFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPDQ 720
Query: 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
AEL+A FF +CKE+PSHW KISDGGLKRIYER
Sbjct: 721 TAELLATFFERCKEDPSHWTKISDGGLKRIYER 753
|
Source: Gossypium mustelinum Species: Gossypium mustelinum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104539|gb|AEN71091.1| sucrose synthase SusA1 [Gossypium tomentosum] gi|345104551|gb|AEN71097.1| sucrose synthase SusA1 [Gossypium hirsutum subsp. latifolium] | Back alignment and taxonomy information |
|---|
Score = 1404 bits (3633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 662/753 (87%), Positives = 705/753 (93%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
MA P L R PS+R+RVEDTLS HRNELV+LLSRYVAQGKGILQPH LIDEL+N+ GDD+
Sbjct: 1 MANPNLGRSPSMRDRVEDTLSAHRNELVALLSRYVAQGKGILQPHTLIDELENVVGDDKA 60
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
R+ L DGPFSEV+KSAQEAI+LPP+VAIAVRPRPGVWEYVRVNV+ELSVEQL VSEYL F
Sbjct: 61 REKLSDGPFSEVLKSAQEAIILPPYVAIAVRPRPGVWEYVRVNVHELSVEQLDVSEYLRF 120
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KE L D + FVLELDFEPFNA+FPRPNRSSSIGNGVQFLNRHLSS+MFRNKD LEPL
Sbjct: 121 KEALADVGEDNHFVLELDFEPFNASFPRPNRSSSIGNGVQFLNRHLSSNMFRNKDSLEPL 180
Query: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
L+FLRAHKYKGH LMLNDRIQSI RLQ++L+KAEDHL+KL PD P+S+FEY LQGMGFE+
Sbjct: 181 LNFLRAHKYKGHALMLNDRIQSIPRLQAALAKAEDHLAKLSPDAPYSEFEYELQGMGFER 240
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGDTA HVLE MHLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPD
Sbjct: 241 GWGDTAAHVLETMHLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPD 300
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQVVYILDQVRALENEMLLRIKRQGLDI+P+ILIVTRLIPDAKGT+CNQRLERVSGTE
Sbjct: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDITPRILIVTRLIPDAKGTSCNQRLERVSGTE 360
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
HTHILRVPFRSE G+LR+WISRFDVWPYLET+ EDV SEI AELQG PDFIIGNYSDGNL
Sbjct: 361 HTHILRVPFRSEHGVLRKWISRFDVWPYLETYAEDVASEIAAELQGIPDFIIGNYSDGNL 420
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASLLAYKMG+TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT
Sbjct: 421 VASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSEK+
Sbjct: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSEKE 540
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
KRLTALHGSIE+LLFDP+QNDEH+GTLSDRSKP++FSMARLD VKNMTGLVE Y KN++L
Sbjct: 541 KRLTALHGSIEELLFDPKQNDEHIGTLSDRSKPLIFSMARLDRVKNMTGLVELYAKNNKL 600
Query: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
REL NLVVVAGYIDV KSKDREEIAEIEKMH+LMK YKLDGQFRWIAAQTNRARNGELYR
Sbjct: 601 RELANLVVVAGYIDVKKSKDREEIAEIEKMHDLMKEYKLDGQFRWIAAQTNRARNGELYR 660
Query: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720
YIAD+KG FVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ
Sbjct: 661 YIADSKGIFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPDQ 720
Query: 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
AEL+A FF +CKE+PSHW KISDGGLKRIYER
Sbjct: 721 TAELLATFFERCKEDPSHWTKISDGGLKRIYER 753
|
Source: Gossypium tomentosum Species: Gossypium tomentosum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359359016|gb|AEV40896.1| sucrose synthase [Gossypium herbaceum] | Back alignment and taxonomy information |
|---|
Score = 1403 bits (3632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 662/753 (87%), Positives = 705/753 (93%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
MA PKL R PS+R+RVEDTLS HRNELV+LLSRYVAQGKGILQPH LIDEL+N+ GDD+
Sbjct: 1 MANPKLGRSPSMRDRVEDTLSAHRNELVALLSRYVAQGKGILQPHTLIDELENVVGDDKA 60
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
R+ L GPFSEV+KSAQEAI+LPP+VAIAVRPRPGVWEYVRVNV+ELSVEQL VSEYL F
Sbjct: 61 REKLSGGPFSEVLKSAQEAIILPPYVAIAVRPRPGVWEYVRVNVHELSVEQLDVSEYLRF 120
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KE L D + FVLELDFEPFNA+FPRPNRSSSIGNGVQFLNRHLSS+MFRNKD LEPL
Sbjct: 121 KEALADVGEDNHFVLELDFEPFNASFPRPNRSSSIGNGVQFLNRHLSSNMFRNKDSLEPL 180
Query: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
L+FLRAHKYKGH LMLNDRIQSI RLQ++L+KAEDHL+KL PD P+S+FEY LQGMGFE+
Sbjct: 181 LNFLRAHKYKGHALMLNDRIQSIPRLQAALAKAEDHLAKLSPDAPYSEFEYELQGMGFER 240
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGDTA HVLE MHLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPD
Sbjct: 241 GWGDTAAHVLETMHLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPD 300
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQVVYILDQVRALENEMLLRIKRQGLDI+P+ILIVTRLIPDAKGT+CNQRLERVSGTE
Sbjct: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDITPRILIVTRLIPDAKGTSCNQRLERVSGTE 360
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
HTHILRVPFRSE G+LR+WISRFDVWPYLET+ EDV SEI AELQG PDFIIGNYSDGNL
Sbjct: 361 HTHILRVPFRSEHGVLRKWISRFDVWPYLETYAEDVASEIAAELQGIPDFIIGNYSDGNL 420
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASLLAYKMG+TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT
Sbjct: 421 VASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSEK+
Sbjct: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSEKE 540
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
KRLTALHGSIE+LLFDP+QNDEH+GTLSDRSKP++FSMARLD VKNMTGLVE Y KN++L
Sbjct: 541 KRLTALHGSIEELLFDPKQNDEHIGTLSDRSKPLIFSMARLDRVKNMTGLVELYAKNNKL 600
Query: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
REL NLVVVAGYIDV KSKDREEIAEIEKMH+LMK YKLDGQFRWIAAQTNRARNGELYR
Sbjct: 601 RELANLVVVAGYIDVKKSKDREEIAEIEKMHDLMKEYKLDGQFRWIAAQTNRARNGELYR 660
Query: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720
YIAD+KG FVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ
Sbjct: 661 YIADSKGIFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPDQ 720
Query: 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
AEL+A FF +CKE+PSHW KISDGGLKRIYER
Sbjct: 721 TAELLATFFERCKEDPSHWTKISDGGLKRIYER 753
|
Source: Gossypium herbaceum Species: Gossypium herbaceum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104559|gb|AEN71101.1| sucrose synthase SusA1 [Gossypium davidsonii] gi|345104561|gb|AEN71102.1| sucrose synthase SusA1 [Gossypium klotzschianum] | Back alignment and taxonomy information |
|---|
Score = 1402 bits (3630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 661/753 (87%), Positives = 705/753 (93%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
MA PKL R PS+R+RVEDTLS HRNELV+LLSRYVAQGKGILQPH LIDEL+N+ GDD+
Sbjct: 1 MANPKLGRSPSMRDRVEDTLSAHRNELVALLSRYVAQGKGILQPHTLIDELENVVGDDKA 60
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
R+ L DGPFSEV+KSAQEAI+LPP+VAIA+RPRPGVWEYVRVNV+ELSVEQL VSEYL F
Sbjct: 61 REKLSDGPFSEVLKSAQEAIILPPYVAIAIRPRPGVWEYVRVNVHELSVEQLDVSEYLRF 120
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KE L D + FVLELDFEPFNA+FPRPNRSSSIGNGVQFLNRHLSS+MFRNKD LEPL
Sbjct: 121 KEALADVREDNHFVLELDFEPFNASFPRPNRSSSIGNGVQFLNRHLSSNMFRNKDSLEPL 180
Query: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
L+FLRAHKYKGH LMLNDRIQSI RLQ++L+KAEDHL+KL D P+S+FEY LQGMGFE+
Sbjct: 181 LNFLRAHKYKGHALMLNDRIQSIPRLQAALAKAEDHLAKLSSDAPYSEFEYELQGMGFER 240
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGDTA HVLE MHLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPD
Sbjct: 241 GWGDTAAHVLETMHLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPD 300
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQVVYILDQVRALENEMLLRIKRQGLDI+P+ILIVTRLIPDAKGT+CNQRLERVSGTE
Sbjct: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDITPRILIVTRLIPDAKGTSCNQRLERVSGTE 360
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
HTHILRVPFRSE G+LR+WISRFDVWPYLET+ EDV SEI AELQG PDFIIGNYSDGNL
Sbjct: 361 HTHILRVPFRSEHGVLRKWISRFDVWPYLETYAEDVASEIAAELQGIPDFIIGNYSDGNL 420
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASLLAYKMG+TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT
Sbjct: 421 VASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSEK+
Sbjct: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSEKE 540
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
KRLTALHGSIE+LLFDP+QNDEH+GTLSDRSKP++FSMARLD VKNMTGLVE Y KN++L
Sbjct: 541 KRLTALHGSIEELLFDPKQNDEHIGTLSDRSKPLIFSMARLDRVKNMTGLVELYAKNNKL 600
Query: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
REL NLVVVAGYIDV KSKDREEIAEIEKMH+LMK YKLDGQFRWIAAQTNRARNGELYR
Sbjct: 601 RELANLVVVAGYIDVKKSKDREEIAEIEKMHDLMKEYKLDGQFRWIAAQTNRARNGELYR 660
Query: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720
YIAD+KG FVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ
Sbjct: 661 YIADSKGIFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPDQ 720
Query: 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
AEL+A FF +CKE+PSHW KISDGGLKRIYER
Sbjct: 721 TAELLATFFERCKEDPSHWTKISDGGLKRIYER 753
|
Source: Gossypium davidsonii Species: Gossypium davidsonii Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104529|gb|AEN71086.1| sucrose synthase SusA1 [Gossypium turneri] gi|345104557|gb|AEN71100.1| sucrose synthase SusA1 [Gossypium harknessii] | Back alignment and taxonomy information |
|---|
Score = 1402 bits (3630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 661/753 (87%), Positives = 705/753 (93%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
MA PKL R PS+R+RVEDTLS HRNELV+LLSRYVAQGKGILQPH LIDEL+N+ GDD+
Sbjct: 1 MANPKLGRSPSMRDRVEDTLSAHRNELVALLSRYVAQGKGILQPHTLIDELENVVGDDKA 60
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
R+ L DGPFSEV+KSAQEAI+LPP+VAIA+RPRPGVWEYVRVNV+ELSVEQL VSEYL F
Sbjct: 61 REKLSDGPFSEVLKSAQEAIILPPYVAIAIRPRPGVWEYVRVNVHELSVEQLDVSEYLRF 120
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KE L D + FVLELDFEPFNA+FPRPNRSSSIGNGVQFLNRHLSS+MFRNKD LEPL
Sbjct: 121 KEALADVREDNHFVLELDFEPFNASFPRPNRSSSIGNGVQFLNRHLSSNMFRNKDSLEPL 180
Query: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
L+FLRAHKYKGH LMLNDRIQSI RLQ++L+KAEDHL+KL D P+S+FEY LQGMGFE+
Sbjct: 181 LNFLRAHKYKGHALMLNDRIQSIPRLQAALAKAEDHLAKLSSDAPYSEFEYELQGMGFER 240
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGDTA HVLE MHLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPD
Sbjct: 241 GWGDTAAHVLETMHLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPD 300
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQVVYILDQVRALENEMLLRIKRQGLDI+P+ILIVTRLIPDAKGT+CNQRLERVSGTE
Sbjct: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDITPRILIVTRLIPDAKGTSCNQRLERVSGTE 360
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
HTHILRVPFRSE G+LR+WISRFDVWPYLET+ EDV SEI AELQG PDFIIGNYSDGNL
Sbjct: 361 HTHILRVPFRSEHGVLRKWISRFDVWPYLETYAEDVASEIAAELQGIPDFIIGNYSDGNL 420
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASLLAYKMG+TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT
Sbjct: 421 VASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSEK+
Sbjct: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSEKE 540
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
KRLTALHGSIE+LLFDP+QNDEHVG+LSDRSKP++FSMARLD VKNMTGLVE Y KN++L
Sbjct: 541 KRLTALHGSIEELLFDPKQNDEHVGSLSDRSKPLIFSMARLDRVKNMTGLVELYAKNNKL 600
Query: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
REL NLVVVAGYIDV KSKDREEIAEIEKMH+LMK YKLDGQFRWIAAQTNRARNGELYR
Sbjct: 601 RELANLVVVAGYIDVKKSKDREEIAEIEKMHDLMKEYKLDGQFRWIAAQTNRARNGELYR 660
Query: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720
YIAD+KG FVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ
Sbjct: 661 YIADSKGIFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPDQ 720
Query: 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
AEL+A FF +CKE+PSHW KISDGGLKRIYER
Sbjct: 721 TAELLATFFERCKEDPSHWTKISDGGLKRIYER 753
|
Source: Gossypium turneri Species: Gossypium turneri Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|345104543|gb|AEN71093.1| sucrose synthase SusA1 [Gossypium barbadense var. brasiliense] | Back alignment and taxonomy information |
|---|
Score = 1402 bits (3630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 661/753 (87%), Positives = 706/753 (93%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
MA PKL R PS+R+RVEDTLS HRNELV+LLSRYVAQGKGILQPH LIDEL+N+ GDD+
Sbjct: 1 MANPKLGRSPSMRDRVEDTLSAHRNELVALLSRYVAQGKGILQPHTLIDELENVVGDDKA 60
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
R+ L DGPFSEV+KSAQEAI+LPP+VAIA+RPRPGVWEYVRVNV+ELSVEQL VSEYL F
Sbjct: 61 REKLSDGPFSEVLKSAQEAIILPPYVAIAIRPRPGVWEYVRVNVHELSVEQLDVSEYLRF 120
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KE L D + FVLELDFEPFNA+FPRPNRSSSIGNGVQFLNRHLSS+MFRNKD LEPL
Sbjct: 121 KEALADVGEDNHFVLELDFEPFNASFPRPNRSSSIGNGVQFLNRHLSSNMFRNKDSLEPL 180
Query: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
L+FLRAHKYKGH LMLNDRIQSI RLQ++L+KAEDHL+KL PD P+S+FEY LQGMGFE+
Sbjct: 181 LNFLRAHKYKGHALMLNDRIQSIPRLQAALAKAEDHLAKLSPDAPYSEFEYELQGMGFER 240
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGDTA HVLE MHLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPD
Sbjct: 241 GWGDTAAHVLETMHLLLDILQAPDPSILETFLGRVPMVFNVVILSPHGYFGQANVLGLPD 300
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQVVYILDQVRALENEMLLRIKRQGLDI+P+ILIVTRLIPDAKGT+CNQRLERVSGTE
Sbjct: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDITPRILIVTRLIPDAKGTSCNQRLERVSGTE 360
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
HTHILRVPFRSE G+LR+WISRFDVWPYLET+ EDV SEI AELQG PDFIIGNYSDGNL
Sbjct: 361 HTHILRVPFRSEHGVLRKWISRFDVWPYLETYAEDVASEIAAELQGIPDFIIGNYSDGNL 420
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASLLAYKMG+TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT
Sbjct: 421 VASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSEK+
Sbjct: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMCIYFPYSEKE 540
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
KRLTALHGSIE+LLFDP+QNDEH+GTLSDRSKP++FSMARLD VKNMTGLVE Y KN++L
Sbjct: 541 KRLTALHGSIEELLFDPKQNDEHIGTLSDRSKPLIFSMARLDRVKNMTGLVELYAKNNKL 600
Query: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
REL NLVVVAGYIDV KSKDREEIAEIEKMH+LMK YKLDG+FRWIAAQTNRARNGELYR
Sbjct: 601 RELANLVVVAGYIDVKKSKDREEIAEIEKMHDLMKEYKLDGEFRWIAAQTNRARNGELYR 660
Query: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720
YIAD+KG FVQPAFYEAFGLTVVEAMTCGLPTFAT HGGPAEIIEHG SGFHIDPYHPDQ
Sbjct: 661 YIADSKGIFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIEHGISGFHIDPYHPDQ 720
Query: 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
AEL+A FF +CKE+PSHW KISDGGLKRIYER
Sbjct: 721 TAELLATFFERCKEDPSHWTKISDGGLKRIYER 753
|
Source: Gossypium barbadense var. brasiliense Species: Gossypium barbadense Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 781 | ||||||
| TAIR|locus:2137829 | 809 | SUS3 "AT4G02280" [Arabidopsis | 0.964 | 0.930 | 0.835 | 0.0 | |
| TAIR|locus:2155894 | 807 | SUS2 "sucrose synthase 2" [Ara | 0.955 | 0.924 | 0.765 | 1.39999997712e-316 | |
| UNIPROTKB|P31924 | 816 | SUS1 "Sucrose synthase 1" [Ory | 0.955 | 0.914 | 0.701 | 2.3e-291 | |
| TAIR|locus:2084756 | 808 | SUS4 "AT3G43190" [Arabidopsis | 0.952 | 0.920 | 0.696 | 1.8e-286 | |
| TAIR|locus:2180489 | 808 | SUS1 "AT5G20830" [Arabidopsis | 0.952 | 0.920 | 0.678 | 8.3e-280 | |
| TAIR|locus:2206865 | 942 | SUS6 "sucrose synthase 6" [Ara | 0.956 | 0.792 | 0.580 | 1.2e-234 | |
| TAIR|locus:2166203 | 836 | SUS5 "sucrose synthase 5" [Ara | 0.944 | 0.882 | 0.559 | 1.1e-224 | |
| TAIR|locus:2124680 | 1050 | ATSPS4F [Arabidopsis thaliana | 0.591 | 0.44 | 0.275 | 6.1e-33 | |
| TAIR|locus:2184891 | 1047 | SPS2F "sucrose phosphate synth | 0.580 | 0.432 | 0.269 | 1.5e-29 | |
| TAIR|locus:2149179 | 1043 | SPS1F "sucrose phosphate synth | 0.585 | 0.438 | 0.257 | 2.2e-27 |
| TAIR|locus:2137829 SUS3 "AT4G02280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3359 (1187.5 bits), Expect = 0., P = 0.
Identities = 629/753 (83%), Positives = 681/753 (90%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
MA PKL+R+ S R+RV+DTLS HRNELV+LLSRYV QGKGILQPH LIDEL+++ GDDE
Sbjct: 1 MANPKLTRVLSTRDRVQDTLSAHRNELVALLSRYVDQGKGILQPHNLIDELESVIGDDET 60
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
+++L DGPF E++KSA EAIV+PPFVA+AVRPRPGVWEYVRVNV+ELSVEQL+VSEYL F
Sbjct: 61 KKSLSDGPFGEILKSAMEAIVVPPFVALAVRPRPGVWEYVRVNVFELSVEQLTVSEYLRF 120
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KEELVD ++ F LELDFEPFNA PRP+RSSSIGNGVQFLNRHLSS MFRNKDCLEPL
Sbjct: 121 KEELVDGPNSDPFCLELDFEPFNANVPRPSRSSSIGNGVQFLNRHLSSVMFRNKDCLEPL 180
Query: 181 LDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
LDFLR HKYKGH LMLND KAEDH+SKL +TPFS+FEY LQGMGFEK
Sbjct: 181 LDFLRVHKYKGHPLMLNDRIQSISRLQIQLSKAEDHISKLSQETPFSEFEYALQGMGFEK 240
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGDTA VLEMMHLL DILQAPDPS+LEKFLG +PMVFNVVILSPHGYFGQANVLGLPD
Sbjct: 241 GWGDTAGRVLEMMHLLSDILQAPDPSSLEKFLGMVPMVFNVVILSPHGYFGQANVLGLPD 300
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQVVYILDQVRALE EMLLRIKRQGLDISP ILIVTRLIPDAKGTTCNQRLERVSGTE
Sbjct: 301 TGGQVVYILDQVRALETEMLLRIKRQGLDISPSILIVTRLIPDAKGTTCNQRLERVSGTE 360
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
HTHILRVPFRSEKGILR+WISRFDVWPYLE + +D SEI ELQG PDFIIGNYSDGNL
Sbjct: 361 HTHILRVPFRSEKGILRKWISRFDVWPYLENYAQDAASEIVGELQGVPDFIIGNYSDGNL 420
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASL+A++MG+TQCTIAHALEKTKYPDSDIYWK FD KYHFSCQFTADLIAMNNADFIIT
Sbjct: 421 VASLMAHRMGVTQCTIAHALEKTKYPDSDIYWKDFDNKYHFSCQFTADLIAMNNADFIIT 480
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
STYQEIAGTKNTVGQYESH AFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSE+
Sbjct: 481 STYQEIAGTKNTVGQYESHGAFTLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSEET 540
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
+RLTALHGSIE++L+ P+Q DEHVGTLSDRSKPI+FSMARLD VKN++GLVE Y KN++L
Sbjct: 541 RRLTALHGSIEEMLYSPDQTDEHVGTLSDRSKPILFSMARLDKVKNISGLVEMYSKNTKL 600
Query: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
RELVNLVV+AG IDVNKSKDREEI EIEKMH LMK YKLDGQFRWI AQTNRARNGELYR
Sbjct: 601 RELVNLVVIAGNIDVNKSKDREEIVEIEKMHNLMKNYKLDGQFRWITAQTNRARNGELYR 660
Query: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720
YIADT+GAF QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG SGFHIDPYHP+Q
Sbjct: 661 YIADTRGAFAQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGLSGFHIDPYHPEQ 720
Query: 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
A +MADFF +CKE+P+HWKK+SD GL+RIYER
Sbjct: 721 AGNIMADFFERCKEDPNHWKKVSDAGLQRIYER 753
|
|
| TAIR|locus:2155894 SUS2 "sucrose synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3036 (1073.8 bits), Expect = 1.4e-316, P = 1.4e-316
Identities = 571/746 (76%), Positives = 643/746 (86%)
Query: 8 RIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDG 67
R ++RE V D +S RNEL+SL SRYVAQGKGILQ H LIDE D ++L
Sbjct: 5 RFETMREWVYDAISAQRNELLSLFSRYVAQGKGILQSHQLIDEFLKTVKVDGTLEDLNKS 64
Query: 68 PFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDA 127
PF +V++SA+EAIVLPPFVA+A+RPRPGV EYVRVNVYELSV+ L+VSEYL FKEELV+
Sbjct: 65 PFMKVLQSAEEAIVLPPFVALAIRPRPGVREYVRVNVYELSVDHLTVSEYLRFKEELVNG 124
Query: 128 SFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAH 187
N ++LELDFEPFNAT PRP RSSSIGNGVQFLNRHLSS MFRNK+ +EPLL+FLR H
Sbjct: 125 HANGDYLLELDFEPFNATLPRPTRSSSIGNGVQFLNRHLSSIMFRNKESMEPLLEFLRTH 184
Query: 188 KYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAE 247
K+ G +MLND +AE+ LSKLP TP+S+FE+ LQGMGFE+GWGDTA+
Sbjct: 185 KHDGRPMMLNDRIQNIPILQGALARAEEFLSKLPLATPYSEFEFELQGMGFERGWGDTAQ 244
Query: 248 HVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVY 307
V EM+HLLLDILQAPDPS LE FLGR+PMVFNVVILSPHGYFGQANVLGLPDTGGQVVY
Sbjct: 245 KVSEMVHLLLDILQAPDPSVLETFLGRIPMVFNVVILSPHGYFGQANVLGLPDTGGQVVY 304
Query: 308 ILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRV 367
ILDQVRALENEMLLRI++QGL++ PKILIVTRL+P+AKGTTCNQRLERVSGTEH HILR+
Sbjct: 305 ILDQVRALENEMLLRIQKQGLEVIPKILIVTRLLPEAKGTTCNQRLERVSGTEHAHILRI 364
Query: 368 PFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAY 427
PFR+EKGILR+WISRFDVWPYLETF ED +EI+AELQG P+ IIGNYSDGNLVASLLA
Sbjct: 365 PFRTEKGILRKWISRFDVWPYLETFAEDASNEISAELQGVPNLIIGNYSDGNLVASLLAS 424
Query: 428 KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIA 487
K+G+ QC IAHALEKTKYP+SDIYW+ ++KYHFS QFTADLIAMNNADFIITSTYQEIA
Sbjct: 425 KLGVIQCNIAHALEKTKYPESDIYWRNHEDKYHFSSQFTADLIAMNNADFIITSTYQEIA 484
Query: 488 GTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH 547
G+KN VGQYESHTAFT+PGLYRVVHGIDVFDPKFNIVSPGADM IYFPYS+K++RLTALH
Sbjct: 485 GSKNNVGQYESHTAFTMPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSDKERRLTALH 544
Query: 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLV 607
SIE+LLF EQNDEHVG LSD+SKPI+FSMARLD VKN+TGLVECY KNS+LREL NLV
Sbjct: 545 ESIEELLFSAEQNDEHVGLLSDQSKPIIFSMARLDRVKNLTGLVECYAKNSKLRELANLV 604
Query: 608 VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG 667
+V GYID N+S+DREE+AEI+KMH L++ Y L G+FRWIAAQ NRARNGELYRYIADTKG
Sbjct: 605 IVGGYIDENQSRDREEMAEIQKMHSLIEQYDLHGEFRWIAAQMNRARNGELYRYIADTKG 664
Query: 668 AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 727
FVQPAFYEAFGLTVVE+MTC LPTFATCHGGPAEIIE+G SGFHIDPYHPDQ A +
Sbjct: 665 VFVQPAFYEAFGLTVVESMTCALPTFATCHGGPAEIIENGVSGFHIDPYHPDQVAATLVS 724
Query: 728 FFGKCKENPSHWKKISDGGLKRIYER 753
FF C NP+HW KIS+GGLKRIYER
Sbjct: 725 FFETCNTNPNHWVKISEGGLKRIYER 750
|
|
| UNIPROTKB|P31924 SUS1 "Sucrose synthase 1" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 2798 (990.0 bits), Expect = 2.3e-291, P = 2.3e-291
Identities = 525/748 (70%), Positives = 620/748 (82%)
Query: 6 LSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLR 65
LSR+ S+RER+ D+LS H NELV++ +R V GKG+LQ H +I E +N + + R+ L+
Sbjct: 10 LSRLHSVRERIGDSLSAHPNELVAVFTRLVNLGKGMLQAHQIIAEYNNAISEAD-REKLK 68
Query: 66 DGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELV 125
DG F +V++SAQE IV+ P+VA+A+RPRPGVWEYVRVNV EL+VE L+V EYL FKE+LV
Sbjct: 69 DGAFEDVLRSAQEGIVISPWVALAIRPRPGVWEYVRVNVSELAVELLTVPEYLQFKEQLV 128
Query: 126 DASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLR 185
+ N FVLELDFEPFNA+FPRP+ S SIGNGVQFLNRHLSS +F +K+ + PLL+FLR
Sbjct: 129 EEGTNNNFVLELDFEPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESMYPLLNFLR 188
Query: 186 AHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDT 245
AH YKG +MLND KAE+HLS L DTP+S+F + Q +G EKGWGD
Sbjct: 189 AHNYKGMTMMLNDRIRSLSALQGALRKAEEHLSGLSADTPYSEFHHRFQELGLEKGWGDC 248
Query: 246 AEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQV 305
A+ E +HLLLD+L+APDPSTLEKFLG +PMVFNVVI+SPHGYF QANVLG PDTGGQV
Sbjct: 249 AKRSQETIHLLLDLLEAPDPSTLEKFLGTIPMVFNVVIMSPHGYFAQANVLGYPDTGGQV 308
Query: 306 VYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHIL 365
VYILDQVRA+ENEMLLRIK+QGL+I+P+ILIVTRL+PDA GTTC QRLE+V GTEHTHIL
Sbjct: 309 VYILDQVRAMENEMLLRIKQQGLNITPRILIVTRLLPDATGTTCGQRLEKVLGTEHTHIL 368
Query: 366 RVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLL 425
RVPFR+E GI+R+WISRF+VWPYLETFT+DV EI ELQ PD IIGNYSDGNLVA LL
Sbjct: 369 RVPFRTENGIVRKWISRFEVWPYLETFTDDVAHEIAGELQANPDLIIGNYSDGNLVACLL 428
Query: 426 AYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485
A+KMG+T CTIAHALEKTKYP+SD+YWKKF++ YHFSCQFT DLIAMN+ADFIITST+QE
Sbjct: 429 AHKMGVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQE 488
Query: 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTA 545
IAG K+TVGQYESH AFT+PGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSE +KRLT+
Sbjct: 489 IAGNKDTVGQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSESRKRLTS 548
Query: 546 LHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVN 605
LH IE+LL+ N+EH L DR+KPI+FSMARLD VKN+TGLVE YG+N +L+ELVN
Sbjct: 549 LHPEIEELLYSEVDNNEHKFMLKDRNKPIIFSMARLDRVKNLTGLVELYGRNPRLQELVN 608
Query: 606 LVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADT 665
LVVV G N SKD+EE AE +KM +L++ Y L+G RWI+AQ NR RNGELYRYI DT
Sbjct: 609 LVVVCGDHG-NPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDT 667
Query: 666 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELM 725
KGAFVQPAFYEAFGLTVVE+MTCGLPTFAT +GGPAEII +G SGFHIDPY D+A+ L+
Sbjct: 668 KGAFVQPAFYEAFGLTVVESMTCGLPTFATAYGGPAEIIVNGVSGFHIDPYQGDKASALL 727
Query: 726 ADFFGKCKENPSHWKKISDGGLKRIYER 753
+FF KC+E+PSHW KIS GGL+RI E+
Sbjct: 728 VEFFEKCQEDPSHWTKISQGGLQRIEEK 755
|
|
| TAIR|locus:2084756 SUS4 "AT3G43190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2752 (973.8 bits), Expect = 1.8e-286, P = 1.8e-286
Identities = 522/749 (69%), Positives = 623/749 (83%)
Query: 6 LSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLR 65
++R+ S RER++ TL +NE+ +LLSR A+GKGILQ H +I E + + E ++ L+
Sbjct: 8 ITRVHSQRERLDATLVAQKNEVFALLSRVEAKGKGILQHHQIIAEFEAM--PLETQKKLK 65
Query: 66 DGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELV 125
G F E ++SAQEAIVLPPFVA+AVRPRPGVWEYVRVN+++L VE+L SEYL FKEELV
Sbjct: 66 GGAFFEFLRSAQEAIVLPPFVALAVRPRPGVWEYVRVNLHDLVVEELQASEYLQFKEELV 125
Query: 126 DASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLR 185
D N F LELDFEPFNA FPRP + IG+GV+FLNRHLS+ +F +K+ L PLL FLR
Sbjct: 126 DGIKNGNFTLELDFEPFNAAFPRPTLNKYIGDGVEFLNRHLSAKLFHDKESLHPLLKFLR 185
Query: 186 AHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDT 245
H ++G LMLN+ KAE++L +L P+T +S+FE+ Q +G E+GWGDT
Sbjct: 186 LHSHEGKTLMLNNRIQNLNTLQHNLRKAEEYLMELKPETLYSEFEHKFQEIGLERGWGDT 245
Query: 246 AEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQV 305
AE VL M+ LLLD+L+APDP TLE FLGR+PMVFNVVILSPHGYF Q NVLG PDTGGQV
Sbjct: 246 AERVLNMIRLLLDLLEAPDPCTLENFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQV 305
Query: 306 VYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHIL 365
VYILDQVRALE EML RIK+QGL+I+P+ILI+TRL+PDA GTTC QRLE+V G+++ IL
Sbjct: 306 VYILDQVRALETEMLQRIKQQGLNITPRILIITRLLPDAAGTTCGQRLEKVYGSQYCDIL 365
Query: 366 RVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLL 425
RVPFR+EKGI+R+WISRF+VWPYLETFTEDV +EI+ ELQG PD IIGNYSDGNLVASLL
Sbjct: 366 RVPFRTEKGIVRKWISRFEVWPYLETFTEDVAAEISKELQGKPDLIIGNYSDGNLVASLL 425
Query: 426 AYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485
A+K+G+TQCTIAHALEKTKYPDSDIYWKK DEKYHFSCQFTADLIAMN+ DFIITST+QE
Sbjct: 426 AHKLGVTQCTIAHALEKTKYPDSDIYWKKLDEKYHFSCQFTADLIAMNHTDFIITSTFQE 485
Query: 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTA 545
IAG+K+TVGQYESH +FTLPGLYRVVHGIDVFDPKFNIVSPGADM IYF Y+E+++RLTA
Sbjct: 486 IAGSKDTVGQYESHRSFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFAYTEEKRRLTA 545
Query: 546 LHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVN 605
H IE+LL+ +N+EH+ L D+ KPI+F+MARLD VKN++GLVE YGKN++LRELVN
Sbjct: 546 FHLEIEELLYSDVENEEHLCVLKDKKKPIIFTMARLDRVKNLSGLVEWYGKNTRLRELVN 605
Query: 606 LVVVAGYIDVNK-SKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD 664
LVVV G D K S+D EE AE++KM+EL++ YKL+GQFRWI++Q NR RNGELYRYI D
Sbjct: 606 LVVVGG--DRRKESQDNEEKAEMKKMYELIEEYKLNGQFRWISSQMNRVRNGELYRYICD 663
Query: 665 TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAEL 724
TKGAFVQPA YEAFGLTVVEAMTCGLPTFATC+GGPAEII HG SGFHIDPYH D+AAE
Sbjct: 664 TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDKAAES 723
Query: 725 MADFFGKCKENPSHWKKISDGGLKRIYER 753
+ADFF KCK +PSHW +IS GGL+RI E+
Sbjct: 724 LADFFTKCKHDPSHWDQISLGGLERIQEK 752
|
|
| TAIR|locus:2180489 SUS1 "AT5G20830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2689 (951.6 bits), Expect = 8.3e-280, P = 8.3e-280
Identities = 508/749 (67%), Positives = 613/749 (81%)
Query: 6 LSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLR 65
++R+ S RER+ +TL RNE+++LLSR A+GKGILQ + +I E + + ++ R+ L
Sbjct: 8 ITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEAL--PEQTRKKLE 65
Query: 66 DGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELV 125
GPF +++KS QEAIVLPP+VA+AVRPRPGVWEY+RVN++ L VE+L +E+LHFKEELV
Sbjct: 66 GGPFFDLLKSTQEAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEELV 125
Query: 126 DASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLR 185
D N F LELDFEPFNA+ PRP IGNGV FLNRHLS+ +F +K+ L PLL FLR
Sbjct: 126 DGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNRHLSAKLFHDKESLLPLLKFLR 185
Query: 186 AHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDT 245
H ++G LML++ KAE++L++L +T + +FE + +G E+GWGD
Sbjct: 186 LHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGDN 245
Query: 246 AEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQV 305
AE VL+M+ LLLD+L+APDP TLE FLGR+PMVFNVVILSPHGYF Q NVLG PDTGGQV
Sbjct: 246 AERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQV 305
Query: 306 VYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHIL 365
VYILDQVRALE EML RIK+QGL+I P+ILI+TRL+PDA GTTC +RLERV +E+ IL
Sbjct: 306 VYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDIL 365
Query: 366 RVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLL 425
RVPFR+EKGI+R+WISRF+VWPYLET+TED E++ EL G PD IIGNYSDGNLVASLL
Sbjct: 366 RVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLL 425
Query: 426 AYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485
A+K+G+TQCTIAHALEKTKYPDSDIYWKK D+KYHFSCQFTAD+ AMN+ DFIITST+QE
Sbjct: 426 AHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQE 485
Query: 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTA 545
IAG+K TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPY+E+++RLT
Sbjct: 486 IAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTK 545
Query: 546 LHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVN 605
H IE+LL+ +N EH+ L D+ KPI+F+MARLD VKN++GLVE YGKN++LREL N
Sbjct: 546 FHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELAN 605
Query: 606 LVVVAGYIDVNK-SKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD 664
LVVV G D K SKD EE AE++KM++L++ YKL+GQFRWI++Q +R RNGELYRYI D
Sbjct: 606 LVVVGG--DRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICD 663
Query: 665 TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAEL 724
TKGAFVQPA YEAFGLTVVEAMTCGLPTFATC GGPAEII HG SGFHIDPYH DQAA+
Sbjct: 664 TKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADT 723
Query: 725 MADFFGKCKENPSHWKKISDGGLKRIYER 753
+ADFF KCKE+PSHW +IS GGL+RI E+
Sbjct: 724 LADFFTKCKEDPSHWDEISKGGLQRIEEK 752
|
|
| TAIR|locus:2206865 SUS6 "sucrose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2263 (801.7 bits), Expect = 1.2e-234, P = 1.2e-234
Identities = 434/748 (58%), Positives = 546/748 (72%)
Query: 6 LSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLR 65
L + SI E++ D L R + + +V GK +++ L++E++ D R +
Sbjct: 9 LQKSDSIAEKMPDALKQSRYHMKRCFASFVGGGKKLMKREHLMNEIEKCIEDSRERSKIL 68
Query: 66 DGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELV 125
+G F ++ QEA V+PPFVA+A RP PG WEYV+VN +L+V++++ ++YL KE +
Sbjct: 69 EGLFGYILTCTQEAAVVPPFVALAARPNPGFWEYVKVNSGDLTVDEITATDYLKLKESVF 128
Query: 126 DASFN-ERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFL 184
D S++ + LE+DF + T PR + SSSIG G ++++ +SS + D LEPLL++L
Sbjct: 129 DESWSKDENALEIDFGAIDFTSPRLSLSSSIGKGADYISKFISSKLGGKSDKLEPLLNYL 188
Query: 185 RAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGD 244
+ G LM+ND A +S TP+ F L+ MGFEKGWGD
Sbjct: 189 LRLNHHGENLMINDDLNTVAKLQKSLMLAVIVVSTYSKHTPYETFAQRLKEMGFEKGWGD 248
Query: 245 TAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQ 304
TAE V E M +L ++L+APD L+ RLP VFNVVI S HGYFGQ +VLGLPDTGGQ
Sbjct: 249 TAERVKETMIILSEVLEAPDNGKLDLLFSRLPTVFNVVIFSVHGYFGQQDVLGLPDTGGQ 308
Query: 305 VVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHI 364
VVYILDQVRALE E+L+RI +QGL P+IL+VTRLIP+A+GT C+Q LE + GT+H+HI
Sbjct: 309 VVYILDQVRALEEELLIRINQQGLGFKPQILVVTRLIPEARGTKCDQELEAIEGTKHSHI 368
Query: 365 LRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASL 424
LRVPF + KG+LRQW+SRFD++PYLE FT+D S+I L PD IIGNY+DGNLVASL
Sbjct: 369 LRVPFVTNKGVLRQWVSRFDIYPYLERFTQDATSKILQRLDCKPDLIIGNYTDGNLVASL 428
Query: 425 LAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484
+A K+G+TQ TIAHALEKTKY DSD WK+ D KYHFSCQFTADLIAMN DFIITSTYQ
Sbjct: 429 MATKLGVTQGTIAHALEKTKYEDSDAKWKELDPKYHFSCQFTADLIAMNVTDFIITSTYQ 488
Query: 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLT 544
EIAG+K+ GQYESHTAFT+PGL RVV GIDVFDPKFNI +PGAD +YFPY+EK KR T
Sbjct: 489 EIAGSKDRPGQYESHTAFTMPGLCRVVSGIDVFDPKFNIAAPGADQSVYFPYTEKDKRFT 548
Query: 545 ALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELV 604
H SI++LL++ + N EH+G L+DR KPI+FSMARLD VKN+TGLVE YGK+ +LRE+
Sbjct: 549 KFHPSIQELLYNEKDNAEHMGYLADREKPIIFSMARLDTVKNITGLVEWYGKDKRLREMA 608
Query: 605 NLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD 664
NLVVVAG+ D++KS DREE AEI+KMH+L++ YKL G+FRWIAAQT+R RN ELYR IAD
Sbjct: 609 NLVVVAGFFDMSKSNDREEKAEIKKMHDLIEKYKLKGKFRWIAAQTDRYRNSELYRCIAD 668
Query: 665 TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAEL 724
TKG FVQPA YEAFGLTV+EAM CGLPTFAT GGPAEII G SGFHIDP + D++
Sbjct: 669 TKGVFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPNNGDESVTK 728
Query: 725 MADFFGKCKENPSHWKKISDGGLKRIYE 752
+ DFF KC+ + +W IS GGLKRIYE
Sbjct: 729 IGDFFSKCRSDGLYWDNISKGGLKRIYE 756
|
|
| TAIR|locus:2166203 SUS5 "sucrose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2169 (768.6 bits), Expect = 1.1e-224, P = 1.1e-224
Identities = 416/743 (55%), Positives = 547/743 (73%)
Query: 11 SIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFS 70
S+ + + + +R + L +Y+ G+ +++ + L+DE++ + D R+ + +G
Sbjct: 7 SLGNGIPEAMGQNRGNIKRCLEKYIENGRRVMKLNELMDEMEIVINDVTQRRRVMEGDLG 66
Query: 71 EVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASF- 129
+++ Q A+V+PP VA AVR PG W+YV+VN LSVE LS ++YL KE L D ++
Sbjct: 67 KILCFTQ-AVVIPPNVAFAVRGTPGNWQYVKVNSSNLSVEALSSTQYLKLKEFLFDENWA 125
Query: 130 NERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKY 189
N+ LE+DF + T P + SSSIGNG+ F++ L R D + L+D+L + ++
Sbjct: 126 NDENALEVDFGALDFTLPWLSLSSSIGNGLSFVSSKLGG---RLNDNPQSLVDYLLSLEH 182
Query: 190 KGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHV 249
+G LM+N+ A+ LS+LP DTPF FE + GFEKGWG++A V
Sbjct: 183 QGEKLMMNETLNTARKLEMSLILADVFLSELPKDTPFQAFELRFKECGFEKGWGESAGRV 242
Query: 250 LEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYIL 309
E M +L +ILQAPDP +++F R+P +FNVVI S HGYFGQ +VLGLPDTGGQVVYIL
Sbjct: 243 KETMRILSEILQAPDPQNIDRFFARVPRIFNVVIFSVHGYFGQTDVLGLPDTGGQVVYIL 302
Query: 310 DQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPF 369
DQV+ALE+E+L RI QGL+ P+IL+VTRLIPDAK T CNQ LE + GT++++ILR+PF
Sbjct: 303 DQVKALEDELLQRINSQGLNFKPQILVVTRLIPDAKKTKCNQELEPIFGTKYSNILRIPF 362
Query: 370 RSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM 429
+E GILR+W+SRFD++PYLE FT+D ++I L+G PD IIGNY+DGNLVASL+A K+
Sbjct: 363 VTENGILRRWVSRFDIYPYLERFTKDATTKILDILEGKPDLIIGNYTDGNLVASLMANKL 422
Query: 430 GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGT 489
GITQ TIAHALEKTKY DSDI WK+FD KYHFS QFTADLI+MN+ADFII STYQEIAG+
Sbjct: 423 GITQATIAHALEKTKYEDSDIKWKEFDPKYHFSSQFTADLISMNSADFIIASTYQEIAGS 482
Query: 490 KNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGS 549
K GQYESH +FT+PGLYRVV GI+VFDP+FNI +PGAD IYFP++ + +R T + S
Sbjct: 483 KERAGQYESHMSFTVPGLYRVVSGINVFDPRFNIAAPGADDSIYFPFTAQDRRFTKFYTS 542
Query: 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVV 609
I++LL+ +NDEH+G L D+ KPI+FSMARLD VKN+TGL E Y KN +LR+LVNLV+V
Sbjct: 543 IDELLYSQSENDEHIGYLVDKKKPIIFSMARLDVVKNLTGLTEWYAKNKRLRDLVNLVIV 602
Query: 610 AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAF 669
G+ D +KSKDREEI+EI+KMH L++ Y+L GQFRWI AQT+R RNGELYR IADT+GAF
Sbjct: 603 GGFFDASKSKDREEISEIKKMHSLIEKYQLKGQFRWITAQTDRTRNGELYRSIADTRGAF 662
Query: 670 VQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 729
VQPA YEAFGLTV+EAM+CGL TFAT GGPAEII G SGFHIDP + +++++ +ADFF
Sbjct: 663 VQPAHYEAFGLTVIEAMSCGLVTFATNQGGPAEIIVDGVSGFHIDPSNGEESSDKIADFF 722
Query: 730 GKCKENPSHWKKISDGGLKRIYE 752
K +P +W S+ GL+RI E
Sbjct: 723 EKSGMDPDYWNMFSNEGLQRINE 745
|
|
| TAIR|locus:2124680 ATSPS4F [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 393 (143.4 bits), Expect = 6.1e-33, P = 6.1e-33
Identities = 135/490 (27%), Positives = 226/490 (46%)
Query: 281 VVILSPHGYFGQANV-LGLP-DTGGQVVYILDQVRALEN-EMLLRIKRQGLDISPKILIV 337
+V++S HG N+ LG DTGGQV Y+++ RAL N E + R+ IS +
Sbjct: 197 IVLISMHGLVRGENMELGRDSDTGGQVKYVVELARALANTEGVHRVDLLTRQISSPEVDY 256
Query: 338 TRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRS-EKGILRQ--W--ISRF--DVWPYLE 390
+ P + +C G+ +I+R+P S +K I ++ W I F ++
Sbjct: 257 SYGEP-VEMLSCPPEGSDSCGS---YIIRIPCGSRDKYIPKESLWPHIPEFVDGALNHIV 312
Query: 391 TFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPD--- 447
+ +G ++ +P I G+Y+D VA+ LA + + H+L + K+
Sbjct: 313 SIARSLGEQVNGGKPIWPYVIHGHYADAGEVAAHLAGALNVPMVLTGHSLGRNKFEQLLQ 372
Query: 448 -SDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLP- 505
I + D Y + A+ +++ A+ ++TST QEI ++ L
Sbjct: 373 QGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQEIDAQWGLYDGFDIKLERKLRV 432
Query: 506 GLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKR--LTALHGSIEQLLFDPEQN--D 561
R V + + P+ ++ PG D ++ L +L G + P
Sbjct: 433 RRRRGVSCLGRYMPRMVVIPPGMDFSYVLTQDSQEPDGDLKSLIGPDRNQIKKPVPPIWS 492
Query: 562 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDR 621
E + S+ KP + +++R DH KN+T LV+ +G+ LREL NLV++ G D +
Sbjct: 493 EIMRFFSNPHKPTILALSRPDHKKNVTTLVKAFGECQPLRELANLVLILGNRDDIEEMPN 552
Query: 622 EEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLT 681
+ + +L+ Y L GQ + ++ ++YR A TKG F+ PA E FGLT
Sbjct: 553 SSSVVLMNVLKLIDQYDLYGQVAY-PKHHKQSEVPDIYRLAAKTKGVFINPALVEPFGLT 611
Query: 682 VVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK 741
++EA GLP AT +GGP +I++ +G +DP+ DQ A ++D K N W +
Sbjct: 612 LIEAAAYGLPIVATRNGGPVDIVKALNNGLLVDPH--DQQA--ISDALLKLVANKHLWAE 667
Query: 742 ISDGGLKRIY 751
GLK I+
Sbjct: 668 CRKNGLKNIH 677
|
|
| TAIR|locus:2184891 SPS2F "sucrose phosphate synthase 2F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 362 (132.5 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 133/494 (26%), Positives = 225/494 (45%)
Query: 281 VVILSPHGYFGQANV-LGLP-DTGGQVVYILDQVRALENEM-LLRIKRQGLDISPKILIV 337
+V++S HG N+ LG DTGGQV Y+++ RAL + + R+ ++ +
Sbjct: 177 IVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVTAPDVDS 236
Query: 338 TRLIPDAKGTTCNQRLERVSG-TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTED- 395
+ P + +E+ +G + +I+R+PF G +++ + +WP++ F +
Sbjct: 237 SYSEPSEMLNPIDTDIEQENGESSGAYIIRIPF----GPKDKYVPKELLWPHIPEFVDRA 292
Query: 396 ----------VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKY 445
+G +I Q +P I G+Y+D +LL+ + + H+L + K
Sbjct: 293 LSHIMQISKVLGEQIGGGQQVWPVSIHGHYADAGDSTALLSGALNVPMVFTGHSLGRDKL 352
Query: 446 PDSDIYWKKFDE---KYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAF 502
+ +E Y + A+ + ++ ++ +ITST QE+ ++
Sbjct: 353 EQLLKQGRPKEEINSNYKIWRRIEAEELCLDASEIVITSTRQEVDEQWRLYDGFDPVLER 412
Query: 503 TLPG-LYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQ-LLFDPEQN 560
L + R V + F P+ ++ PG + P+ G E DP
Sbjct: 413 KLRARMKRGVSCLGRFMPRMVVIPPGMEFHHIVPHD------VDADGDDENPQTADPPIW 466
Query: 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGY---IDVNK 617
E + S+ KP++ ++AR D KN+ LV+ +G+ LREL NL ++ G ID
Sbjct: 467 SEIMRFFSNPRKPMILALARPDPKKNLVTLVKAFGECRPLRELANLTLIMGNRNDIDELS 526
Query: 618 SKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677
S + + I K L+ Y L GQ + ++ E+YR A TKG F+ PAF E
Sbjct: 527 STNSSVLLSILK---LIDKYDLYGQVA-MPKHHQQSDVPEIYRLAAKTKGVFINPAFIEP 582
Query: 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS 737
FGLT++EA GLPT AT +GGP +I +G +DP+ DQ A +AD K +
Sbjct: 583 FGLTLIEAGAHGLPTVATINGGPVDIHRVLDNGLLVDPH--DQQA--IADALLKLVSDRQ 638
Query: 738 HWKKISDGGLKRIY 751
W + GL I+
Sbjct: 639 LWGRCRQNGLNNIH 652
|
|
| TAIR|locus:2149179 SPS1F "sucrose phosphate synthase 1F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 342 (125.4 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 128/497 (25%), Positives = 221/497 (44%)
Query: 281 VVILSPHGYFGQANV-LGLP-DTGGQVVYILDQVRALENEM-LLRIK---RQ--GLDISP 332
+V++S HG N+ LG DTGGQV Y+++ RAL + + R+ RQ D+
Sbjct: 170 LVLISLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDY 229
Query: 333 KILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETF 392
T ++ + + SG +I+R+PF G ++I + +WP++ F
Sbjct: 230 SYGEPTEMLTPRDSEDFSDEMGESSGA---YIVRIPF----GPKDKYIPKELLWPHIPEF 282
Query: 393 TEDVGSEIT------AELQG-----FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALE 441
+ S I E G +P I G+Y+D +LL+ + + H+L
Sbjct: 283 VDGAMSHIMQMSNVLGEQVGVGKPIWPSAIHGHYADAGDATALLSGALNVPMLLTGHSLG 342
Query: 442 KTKYPD----SDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYE 497
+ K + ++ + Y + + ++++ ++ +ITST QEI ++
Sbjct: 343 RDKLEQLLRQGRLSKEEINSTYKIMRRIEGEELSLDVSEMVITSTRQEIDEQWRLYDGFD 402
Query: 498 SHTAFTLPG-LYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLF- 555
L + R V F P+ + PG + + P+ + G+ E
Sbjct: 403 PILERKLRARIKRNVSCYGRFMPRMVKIPPGMEFNHIVPHGGDMEDTD---GNEEHPTSP 459
Query: 556 DPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDV 615
DP E + S+ KP++ ++AR D KN+T LV+ +G+ LREL NL ++ G D
Sbjct: 460 DPPIWAEIMRFFSNSRKPMILALARPDPKKNITTLVKAFGECRPLRELANLALIMGNRDG 519
Query: 616 NKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 675
+ + + +L+ Y L GQ + ++ ++YR A +KG F+ PA
Sbjct: 520 IDEMSSTSSSVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKSKGVFINPAII 578
Query: 676 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKEN 735
E FGLT++EA GLP AT +GGP +I +G +DP+ +E + K +
Sbjct: 579 EPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQSISEALL----KLVAD 634
Query: 736 PSHWKKISDGGLKRIYE 752
W K GLK I++
Sbjct: 635 KHLWAKCRQNGLKNIHQ 651
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q42652 | SUSY_BETVU | 2, ., 4, ., 1, ., 1, 3 | 0.8158 | 0.8873 | 0.9046 | N/A | no |
| O49845 | SUS2_DAUCA | 2, ., 4, ., 1, ., 1, 3 | 0.6923 | 0.9539 | 0.9300 | N/A | no |
| Q9M111 | SUS3_ARATH | 2, ., 4, ., 1, ., 1, 3 | 0.8499 | 0.9641 | 0.9307 | yes | no |
| Q01390 | SUSY_VIGRR | 2, ., 4, ., 1, ., 1, 3 | 0.7148 | 0.9590 | 0.9304 | N/A | no |
| P04712 | SUS1_MAIZE | 2, ., 4, ., 1, ., 1, 3 | 0.7154 | 0.9539 | 0.9289 | N/A | no |
| P10691 | SUS1_SOLTU | 2, ., 4, ., 1, ., 1, 3 | 0.7148 | 0.9590 | 0.9304 | N/A | no |
| P31924 | SUS1_ORYSJ | 2, ., 4, ., 1, ., 1, 3 | 0.7112 | 0.9551 | 0.9142 | no | no |
| P31926 | SUSY_VICFA | 2, ., 4, ., 1, ., 1, 3 | 0.7108 | 0.9590 | 0.9292 | N/A | no |
| P31923 | SUS2_HORVU | 2, ., 4, ., 1, ., 1, 3 | 0.7022 | 0.9539 | 0.9129 | N/A | no |
| P31922 | SUS1_HORVU | 2, ., 4, ., 1, ., 1, 3 | 0.7021 | 0.9526 | 0.9219 | N/A | no |
| O65026 | SUSY_MEDSA | 2, ., 4, ., 1, ., 1, 3 | 0.7055 | 0.9590 | 0.9304 | N/A | no |
| Q41607 | SUS2_TULGE | 2, ., 4, ., 1, ., 1, 3 | 0.7078 | 0.9615 | 0.9158 | N/A | no |
| Q41608 | SUS1_TULGE | 2, ., 4, ., 1, ., 1, 3 | 0.7188 | 0.9577 | 0.9291 | N/A | no |
| P49039 | SUS2_SOLTU | 2, ., 4, ., 1, ., 1, 3 | 0.7108 | 0.9590 | 0.9304 | N/A | no |
| P49034 | SUSY_ALNGL | 2, ., 4, ., 1, ., 1, 3 | 0.7029 | 0.9564 | 0.9302 | N/A | no |
| P49035 | SUS1_DAUCA | 2, ., 4, ., 1, ., 1, 3 | 0.7082 | 0.9615 | 0.9294 | N/A | no |
| P49036 | SUS2_MAIZE | 2, ., 4, ., 1, ., 1, 3 | 0.7125 | 0.9551 | 0.9142 | N/A | no |
| P49037 | SUSY_SOLLC | 2, ., 4, ., 1, ., 1, 3 | 0.7175 | 0.9590 | 0.9304 | N/A | no |
| O24301 | SUS2_PEA | 2, ., 4, ., 1, ., 1, 3 | 0.852 | 0.9603 | 0.9270 | N/A | no |
| Q9LXL5 | SUS4_ARATH | 2, ., 4, ., 1, ., 1, 3 | 0.7049 | 0.9526 | 0.9207 | no | no |
| Q00917 | SUS2_ARATH | 2, ., 4, ., 1, ., 1, 3 | 0.7747 | 0.9551 | 0.9244 | no | no |
| P30298 | SUS2_ORYSJ | 2, ., 4, ., 1, ., 1, 3 | 0.7083 | 0.9551 | 0.9232 | no | no |
| P13708 | SUSY_SOYBN | 2, ., 4, ., 1, ., 1, 3 | 0.7175 | 0.9590 | 0.9304 | no | no |
| Q10LP5 | SUS4_ORYSJ | 2, ., 4, ., 1, ., 1, 3 | 0.8154 | 0.9615 | 0.9283 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00028036001 | SubName- Full=Putative uncharacterized protein (Chromosome chr7 scaffold_42, whole genome shotgun sequence); (811 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| GSVIVG00038290001 | SubName- Full=Chromosome undetermined scaffold_92, whole genome shotgun sequence; (196 aa) | • | • | 0.925 | |||||||
| GSVIVG00004764001 | SubName- Full=Chromosome undetermined scaffold_805, whole genome shotgun sequence; (537 aa) | • | • | 0.925 | |||||||
| CWINV | SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (575 aa) | • | • | 0.915 | |||||||
| GSVIVG00038825001 | SubName- Full=Chromosome chr5 scaffold_98, whole genome shotgun sequence; (1031 aa) | • | • | • | • | 0.914 | |||||
| GSVIVG00006423001 | SubName- Full=Chromosome chr11 scaffold_170, whole genome shotgun sequence; (1052 aa) | • | • | • | 0.913 | ||||||
| GSVIVG00034877001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (465 aa) | • | • | 0.906 | |||||||
| GSVIVG00035830001 | SubName- Full=Chromosome chr10 scaffold_81, whole genome shotgun sequence; (828 aa) | • | 0.899 | ||||||||
| GSVIVG00032196001 | SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (563 aa) | • | 0.899 | ||||||||
| GSVIVG00030060001 | SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (459 aa) | • | 0.899 | ||||||||
| GSVIVG00027920001 | SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (927 aa) | • | 0.899 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 781 | |||
| PLN00142 | 815 | PLN00142, PLN00142, sucrose synthase | 0.0 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 0.0 | |
| pfam00862 | 550 | pfam00862, Sucrose_synth, Sucrose synthase | 0.0 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 1e-126 | |
| TIGR02472 | 439 | TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas | 5e-58 | |
| TIGR02468 | 1050 | TIGR02468, sucrsPsyn_pln, sucrose phosphate syntha | 2e-31 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 2e-22 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 3e-18 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 1e-16 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 2e-14 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 1e-13 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 3e-13 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 9e-13 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 1e-11 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 5e-11 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 7e-11 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 1e-09 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 5e-09 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 6e-09 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 7e-09 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 3e-08 | |
| cd04949 | 372 | cd04949, GT1_gtfA_like, This family is most closel | 7e-08 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 8e-08 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 1e-07 | |
| cd03804 | 351 | cd03804, GT1_wbaZ_like, This family is most closel | 4e-07 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 7e-07 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 1e-06 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 1e-06 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 1e-06 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 1e-06 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 3e-06 | |
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 4e-06 | |
| TIGR04157 | 406 | TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG | 1e-05 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 2e-05 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 1e-04 | |
| cd03813 | 475 | cd03813, GT1_like_3, This family is most closely r | 2e-04 | |
| TIGR04047 | 373 | TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M | 3e-04 | |
| TIGR02095 | 473 | TIGR02095, glgA, glycogen/starch synthase, ADP-glu | 4e-04 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 0.001 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 0.002 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 0.003 |
| >gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase | Back alignment and domain information |
|---|
Score = 1661 bits (4303), Expect = 0.0
Identities = 618/753 (82%), Positives = 681/753 (90%)
Query: 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEG 60
AAP L+R SIRERV D LS HRNEL +LLSRYVAQGKGILQPH LIDEL+ + DDE
Sbjct: 2 AAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEE 61
Query: 61 RQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHF 120
R+ L DGPF ++++S QEAIVLPPFVA+AVRPRPGVWEYVRVNV ELSVE+L+VSEYL F
Sbjct: 62 RKKLLDGPFGDILRSTQEAIVLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKF 121
Query: 121 KEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPL 180
KEELVD S+N+ FVLELDFEPFNA+FPRP SSSIGNGVQFLNRHLSS +FR+K+ LEPL
Sbjct: 122 KEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQFLNRHLSSKLFRDKESLEPL 181
Query: 181 LDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240
LDFLRAH +KG LMLNDRIQ++S+LQS+L KAE++LSKLP DTP+S+FE+ Q +G EK
Sbjct: 182 LDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEK 241
Query: 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPD 300
GWGDTAE VLE +HLLLD+LQAPDPSTLEKFLGR+PMVFNVVI SPHGYFGQANVLGLPD
Sbjct: 242 GWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPD 301
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360
TGGQVVYILDQVRALENEMLLRIK+QGLDI P+ILIVTRLIPDAKGTTCNQRLE+VSGTE
Sbjct: 302 TGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTE 361
Query: 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNL 420
H+HILRVPFR+EKGILR+WISRFDVWPYLETF ED SEI AELQG PD IIGNYSDGNL
Sbjct: 362 HSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNL 421
Query: 421 VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480
VASLLA+K+G+TQCTIAHALEKTKYPDSDIYWKKFD+KYHFSCQFTADLIAMN+ADFIIT
Sbjct: 422 VASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIIT 481
Query: 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ 540
STYQEIAG+K+TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPY+EKQ
Sbjct: 482 STYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQ 541
Query: 541 KRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600
KRLT+LH SIE+LL+ PEQNDEH+G L DR KPI+FSMARLD VKN+TGLVE YGKN +L
Sbjct: 542 KRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRL 601
Query: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
RELVNLVVV G+ID +KSKDREEIAEI+KMH L++ Y L GQFRWIAAQTNR RNGELYR
Sbjct: 602 RELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYR 661
Query: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720
YIADTKGAFVQPA YEAFGLTVVEAMTCGLPTFATC GGPAEII G SGFHIDPYH D+
Sbjct: 662 YIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDE 721
Query: 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
AA +ADFF KCKE+PS+W KISD GL+RIYE
Sbjct: 722 AANKIADFFEKCKEDPSYWNKISDAGLQRIYEC 754
|
Length = 815 |
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
Score = 1384 bits (3584), Expect = 0.0
Identities = 544/731 (74%), Positives = 619/731 (84%), Gaps = 1/731 (0%)
Query: 24 RNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLP 83
R EL LLSRYV+QGK L H L+DE + D + + L + P ++I S QEAIVLP
Sbjct: 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESPLGKLIFSTQEAIVLP 60
Query: 84 PFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFN 143
P+VA+AVRPR GVWEYVRVNV ELSVE+L++SEYL FKE+LV+ N+ VLELDFEPFN
Sbjct: 61 PWVALAVRPRIGVWEYVRVNVEELSVEELTISEYLDFKEQLVNGHANDPNVLELDFEPFN 120
Query: 144 ATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSI 203
A+FPRP+ S SIGNGVQFLNRHLSS +F++ + +EPLL+FLR H Y G LM+NDRIQS+
Sbjct: 121 ASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNFLRVHNYNGIQLMINDRIQSV 180
Query: 204 SRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAP 263
S LQS L KAE+ LS LPPDTP+S+FE+ LQ +GFE GWGDTA+ VLE +HLL D+L+AP
Sbjct: 181 SHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAP 240
Query: 264 DPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRI 323
DPS LE FLGR+PMVFNVVILSPHGYFGQ NVLGLPDTGGQVVYILDQVRALENEML RI
Sbjct: 241 DPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRI 300
Query: 324 KRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGI-LRQWISR 382
K QGL+I+PKILIVTRLIPDA+GTTCNQRLE+V GTEH ILRVPFR+E GI LR WISR
Sbjct: 301 KLQGLEITPKILIVTRLIPDAEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISR 360
Query: 383 FDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEK 442
F++WPYLETF ED EI AELQG PD IIGNYSDGNLVASLLA K+G+TQCTIAHALEK
Sbjct: 361 FEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGVTQCTIAHALEK 420
Query: 443 TKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAF 502
TKYPDSDIYW++F++KYHFSCQFTADLIAMN ADFIITSTYQEIAGTK++VGQYESH AF
Sbjct: 421 TKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAF 480
Query: 503 TLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562
T+PGLYRVVHGIDVFDPKFNIVSPGAD IYFPYS+K+KRLT LH IE+LLF E NDE
Sbjct: 481 TMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDE 540
Query: 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDRE 622
H G L D +KPI+FSMARLD VKN+TGLVECYG++ +LRELVNLVVVAG +D +SKDRE
Sbjct: 541 HYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDRE 600
Query: 623 EIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTV 682
E AEIEKMH L+ Y+L GQ RWI AQ NR RNGELYRYIADTKG FVQPA YEAFGLTV
Sbjct: 601 EQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTV 660
Query: 683 VEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 742
+EAMTCGLPTFAT GGP EII+ G SGFHIDPYH ++AAE + DFF KC E+PS+W+KI
Sbjct: 661 LEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720
Query: 743 SDGGLKRIYER 753
S GGL+RIYE+
Sbjct: 721 SQGGLQRIYEK 731
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784 |
| >gnl|CDD|109900 pfam00862, Sucrose_synth, Sucrose synthase | Back alignment and domain information |
|---|
Score = 1047 bits (2709), Expect = 0.0
Identities = 442/549 (80%), Positives = 497/549 (90%)
Query: 7 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRD 66
+R+ S+RER++DTLS HRNEL++LLSR VAQGKGILQPH LI E + I G+D + + ++
Sbjct: 1 TRVHSLRERLDDTLSAHRNELLALLSRIVAQGKGILQPHQLIAEYEAILGEDRAKLDDKN 60
Query: 67 GPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVD 126
G F EVIKSAQEAIVLPP+VA+AVRPRPGVWEYVRVNV+EL VE+LSV EYL FKEELVD
Sbjct: 61 GAFGEVIKSAQEAIVLPPWVALAVRPRPGVWEYVRVNVHELVVEELSVPEYLQFKEELVD 120
Query: 127 ASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRA 186
S N+ FVLELDFEPFNA+FPRP S SIGNGVQFLNRHLSS MF +KD L PLL+FLR
Sbjct: 121 GSSNDNFVLELDFEPFNASFPRPTLSKSIGNGVQFLNRHLSSKMFHDKDSLHPLLEFLRL 180
Query: 187 HKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTA 246
H YKG LMLNDRIQ+IS LQS+L KAED+LS LPPDTP+S+FE+ Q +GFE+GWGDTA
Sbjct: 181 HTYKGKTLMLNDRIQNISALQSALRKAEDYLSTLPPDTPYSEFEHKFQEIGFERGWGDTA 240
Query: 247 EHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVV 306
E VLEMMHLLLD+L+APDPSTLE FLGR+PMVFNVVILSPHGYF QANVLG PDTGGQVV
Sbjct: 241 ERVLEMMHLLLDLLEAPDPSTLETFLGRIPMVFNVVILSPHGYFAQANVLGYPDTGGQVV 300
Query: 307 YILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILR 366
YILDQVRALE+EML+RIK+QGLDI+P+ILIVTRL+PDA GTTCNQRLE+V GTEHTHILR
Sbjct: 301 YILDQVRALESEMLVRIKQQGLDITPRILIVTRLLPDAVGTTCNQRLEKVFGTEHTHILR 360
Query: 367 VPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLA 426
VPFR+EKGILR+WISRF+VWPYLETF EDV SEI AELQ PD IIGNYSDGNLVASLLA
Sbjct: 361 VPFRTEKGILRKWISRFEVWPYLETFAEDVASEIAAELQAKPDLIIGNYSDGNLVASLLA 420
Query: 427 YKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486
+K+G+TQCTIAHALEKTKYPDSDIYWKKF++KYHFSCQFTADLIAMN+ADFIITST+QEI
Sbjct: 421 HKLGVTQCTIAHALEKTKYPDSDIYWKKFEKKYHFSCQFTADLIAMNHADFIITSTFQEI 480
Query: 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTAL 546
AG+K+TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPY+EK+KRLTAL
Sbjct: 481 AGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYTEKEKRLTAL 540
Query: 547 HGSIEQLLF 555
H IE+LL+
Sbjct: 541 HPEIEELLY 549
|
Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. Length = 550 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 383 bits (985), Expect = e-126
Identities = 132/474 (27%), Positives = 195/474 (41%), Gaps = 88/474 (18%)
Query: 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTR 339
+ ++S HG G DTGGQ VY+L+ RAL R G ++ I TR
Sbjct: 1 RIALISLHGSPLAQP--GGADTGGQNVYVLELARAL--------ARLG----HEVDIFTR 46
Query: 340 LIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSE 399
I DA V ++RVP + + ++ ++WPYL+ F +D+
Sbjct: 47 RIDDALP-------PIVELAPGVRVVRVPAGPAEYLPKE-----ELWPYLDEFADDLLRF 94
Query: 400 ITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKY 459
+ E G PD I +Y D LVA LLA ++GI H+L K Y
Sbjct: 95 LRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGAVKRRHLGAADT-----Y 148
Query: 460 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519
+ + A+ + AD +I ST QE + G Y
Sbjct: 149 EPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAYPRR-------------------- 188
Query: 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMA 579
+V PG D++ + PY + R L L D KP + ++
Sbjct: 189 -IRVVPPGVDLERFTPYGRAEARRARL--------------------LRDPDKPRILAVG 227
Query: 580 RLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 639
RLD K + L+ Y + +LRE NLV+V G D + D EE+ E+ + ++
Sbjct: 228 RLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDF 287
Query: 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 699
+ +R LYR FV PA YE FGLT +EAM CGLP AT GG
Sbjct: 288 -------PGRVSREDLPALYRA----ADVFVNPALYEPFGLTALEAMACGLPVVATAVGG 336
Query: 700 PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
P +I+ G +G +DP P+ A + +P+ +++S GL+R R
Sbjct: 337 PRDIVVDGVTGLLVDPRDPEALAAALRRLL----TDPALRRRLSRAGLRRARAR 386
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Score = 203 bits (519), Expect = 5e-58
Identities = 133/476 (27%), Positives = 229/476 (48%), Gaps = 67/476 (14%)
Query: 281 VVILSPHGYFGQANVLGL---PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIV 337
+++LS HG + + L L DTGGQ Y+L+ RAL R ++ ++ +V
Sbjct: 3 LLLLSLHGLI-RGHDLELGRDADTGGQTKYVLELARALAR-------RSEVE---QVDLV 51
Query: 338 TRLIPDAK-GTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDV 396
TRLI DAK Q +ER++ I+R+PF R+++ + +WPYL+ +++
Sbjct: 52 TRLIKDAKVSPDYAQPIERIA--PGARIVRLPFGP-----RRYLRKELLWPYLDELADNL 104
Query: 397 GSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYP---DSDIYWK 453
+ + PD I +Y+D V + L+ +G+ H+L + K + + +
Sbjct: 105 LQHLR-QQGHLPDLIHAHYADAGYVGARLSRLLGVPLIFTGHSLGREKRRRLLAAGLKPQ 163
Query: 454 KFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 513
+ +++Y+ S + A+ + +A +ITST+QEI QY LY
Sbjct: 164 QIEKQYNISRRIEAEEETLAHASLVITSTHQEI------EEQY---------ALY----- 203
Query: 514 IDVFDP-KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSK 572
D + P + ++ PG D+ ++P ++ + + + L DPE K
Sbjct: 204 -DSYQPERMQVIPPGVDLSRFYPPQSSEE-TSEIDNLLAPFLKDPE-------------K 248
Query: 573 PIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHE 632
P + +++R D KN+ LVE YG++ +L+E+ NLV+V G D + + ++ ++K+
Sbjct: 249 PPILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLL 308
Query: 633 LMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPT 692
L+ Y L G+ ELYR A ++G FV PA E FGLT++EA CGLP
Sbjct: 309 LIDRYDLYGKVA-YPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPI 367
Query: 693 FATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLK 748
AT GGP +II + +G +D + A + D + S W+ S G++
Sbjct: 368 VATDDGGPRDIIANCRNGLLVDVLDLEAIASALED----ALSDSSQWQLWSRNGIE 419
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439 |
| >gnl|CDD|233879 TIGR02468, sucrsPsyn_pln, sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 2e-31
Identities = 137/527 (25%), Positives = 235/527 (44%), Gaps = 101/527 (19%)
Query: 281 VVILSPHGYFGQANV-LGL-PDTGGQVVYILDQVRALEN-------EMLLR-IKRQGLDI 330
+V++S HG N+ LG DTGGQV Y+++ RAL + ++L R + +D
Sbjct: 172 IVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDW 231
Query: 331 S---PKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWP 387
S P ++ R + + + + +I+R+PF G ++I + ++WP
Sbjct: 232 SYGEPTEMLTPRSSENDG--------DEMGESSGAYIIRIPF----GPRDKYIPKEELWP 279
Query: 388 YLETFTED-----------VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 436
Y+ F + +G +I + +P I G+Y+D A+LL+ + +
Sbjct: 280 YIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSAALLSGALNVPMVLT 339
Query: 437 AHALEKTK---------YPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIA 487
H+L + K +I + Y + A+ ++++ ++ +ITST QEI
Sbjct: 340 GHSLGRDKLEQLLKQGRMSKEEI-----NSTYKIMRRIEAEELSLDASEIVITSTRQEIE 394
Query: 488 GTKNTVGQYESHTAFTLPGLYRVV----------HGIDVFDPKFNIVSPGADMDIYFPYS 537
Q+ + F L R + +G F P+ ++ PG + P+
Sbjct: 395 E------QWGLYDGFD-VILERKLRARARRGVSCYG--RFMPRMAVIPPGMEFSHIVPHD 445
Query: 538 EKQKRLTALHGSIEQLLFDPEQND-----EHVGTLSDRSKPIVFSMARLDHVKNMTGLVE 592
+ G E P + D E + ++ KP++ ++AR D KN+T LV+
Sbjct: 446 GD------MDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVK 499
Query: 593 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMH--------ELMKTYKLDGQFR 644
+G+ LREL NL ++ G +R++I E+ +L+ Y L GQ
Sbjct: 500 AFGECRPLRELANLTLIMG--------NRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVA 551
Query: 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII 704
+ ++ ++YR A TKG F+ PAF E FGLT++EA GLP AT +GGP +I
Sbjct: 552 Y-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIH 610
Query: 705 EHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751
+G +DP+ DQ A +AD K + W + GLK I+
Sbjct: 611 RVLDNGLLVDPH--DQQA--IADALLKLVADKQLWAECRQNGLKNIH 653
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. Length = 1050 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 94.3 bits (235), Expect = 2e-22
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 21/178 (11%)
Query: 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMH 631
KPI+ + RL K + L+E + + + LV+V G + K K+
Sbjct: 2 KPIILFVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIV-GDGEEEK-----------KLK 49
Query: 632 ELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP 691
+L L+ ++ ELYR IAD FV P+ YE FGL ++EAM G+P
Sbjct: 50 KLALKLGLEDNVIFVGFV-PDEDLIELYR-IAD---LFVLPSRYEGFGLVLLEAMAAGVP 104
Query: 692 TFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749
AT GGPAEI++ G +G +DP + AE + ++ +++ + KR
Sbjct: 105 VIATDVGGPAEIVKDGETGLLVDPGDAEALAEAIEKL----LKDEELRERLGENARKR 158
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 87.1 bits (216), Expect = 3e-18
Identities = 88/459 (19%), Positives = 153/459 (33%), Gaps = 112/459 (24%)
Query: 298 LPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357
P GG ++L+ RAL +G +++ ++T E V
Sbjct: 10 PPSVGGAERHVLELARAL--------AARGHEVT----VLTPGDGG------LPDEEEVG 51
Query: 358 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSD 417
G + P + +L + + L + D + +
Sbjct: 52 G--IVVVRPPPLLRVRRLLLLLLLALRLRRLL--------------RRERFDVVHAHDWL 95
Query: 418 GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADF 477
L A+L A +GI H LE K + + A+ AD
Sbjct: 96 ALLAAALAARLLGIPLVLTVHGLE----FGRPGNELGLLLKLARALER----RALRRADR 147
Query: 478 IIT-STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPY 536
II S T+ + + G+ K ++ G D + + P
Sbjct: 148 IIAVSEA-----TREELREL---------------GGVP--PEKITVIPNGVDTERFRPA 185
Query: 537 SEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596
+R + +P++ + RL K + L+E
Sbjct: 186 PRAARRRLGI----------------------PEDEPVILFVGRLVPRKGVDLLLEAL-- 221
Query: 597 NSQLRELVNLV--VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRAR 654
++LR+ V V+ G D E+E L L + ++ +
Sbjct: 222 -AKLRKEYPDVRLVIVG--------DGPLREELE---ALAAELGLGDRVTFLGFVPDEDL 269
Query: 655 NGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHID 714
LY AD FV P+ YE FGL ++EAM GLP A+ GG E++E G +G +
Sbjct: 270 P-ALYA-AAD---VFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVP 324
Query: 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
P P+ AE + ++P +++ + +R+ ER
Sbjct: 325 PGDPEALAEAILRLL----DDPELRRRLGEAARERVAER 359
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 82.3 bits (202), Expect = 1e-16
Identities = 52/232 (22%), Positives = 93/232 (40%), Gaps = 24/232 (10%)
Query: 523 IVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD 582
+++ + ++ + I+ F P +G L + K +V + RLD
Sbjct: 154 VIAVSPALKELLEALGVPNKIVVIPNGIDTEKFAPA----RIGLLPEGGKFVVLYVGRLD 209
Query: 583 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642
K + L+E K + + LV+V + REE+ ++ K L K G
Sbjct: 210 PEKGLDLLIEAAAKLKKRGPDIKLVIVGD-----GPERREELEKLAKKLGLEDNVKFLGY 264
Query: 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE 702
EL +A FV P+ E FGL ++EAM G P A+ GG E
Sbjct: 265 VPDE----------ELAELLASAD-VFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPE 313
Query: 703 IIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754
++E G +G + P ++ A+ + E+P +++ + +R+ E
Sbjct: 314 VVEDGETGLLVPPGDVEELADALEQLL----EDPELREELGEAARERVEEEF 361
|
Length = 381 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 2e-14
Identities = 48/230 (20%), Positives = 85/230 (36%), Gaps = 21/230 (9%)
Query: 524 VSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDH 583
VS G D+ ++ ++ I+ +E + P++ ++ RL
Sbjct: 142 VSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIR-ALAEEPLELGIPPDGPVILAVGRLSP 200
Query: 584 VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643
K L+ + + LV++ G D E+E L K L +
Sbjct: 201 QKGFDTLIRAFALLRKEGPDARLVIL-G--------DGPLREELEA---LAKELGLADRV 248
Query: 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEI 703
++ Q+N Y Y+ FV + YE F ++EAM G P AT GP EI
Sbjct: 249 HFLGFQSNP------YPYLKAAD-LFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREI 301
Query: 704 IEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
+E G +G + P + A A +P ++++ +R+
Sbjct: 302 LEDGENGL-LVPVGDEAALAAAALALLDLLLDPELRERLAAAARERVARE 350
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 72.8 bits (179), Expect = 1e-13
Identities = 46/221 (20%), Positives = 83/221 (37%), Gaps = 30/221 (13%)
Query: 533 YFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVE 592
Y ++ + ++ P E + L +P + ++ KN+ L+E
Sbjct: 158 YLGVPPD--KIVVIPLGVDPRFRPPPAEAEVLRALYLLPRPYFLYVGTIEPRKNLERLLE 215
Query: 593 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNR 652
+ + LV+V G E++ ++ L + R+
Sbjct: 216 AFARLPAKGPDPKLVIV-GKRG----------WLNEELLARLRELGLGDRVRF----LGY 260
Query: 653 ARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFA---TCHGGPAEIIEHGAS 709
+ EL + AFV P+ YE FGL V+EAM CG P A + E+ G +
Sbjct: 261 VSDEELAALYRGAR-AFVFPSLYEGFGLPVLEAMACGTPVIASNISSL---PEVA--GDA 314
Query: 710 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750
+ DP P+ A + E+P+ +++ + GL R
Sbjct: 315 ALYFDPLDPEALAAAIERLL----EDPALREELRERGLARA 351
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 71.6 bits (176), Expect = 3e-13
Identities = 50/189 (26%), Positives = 74/189 (39%), Gaps = 19/189 (10%)
Query: 540 QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599
+++T + ++ F P E K ++ + RL K + L+E + +
Sbjct: 170 PEKVTVIPNGVDTERFSPADRAEARKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLK 229
Query: 600 LRELVNLVVV-AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGEL 658
R V+LV+V G RE + + L G
Sbjct: 230 KRPDVHLVIVGDG-------PLREALEALAAELGLEDRVTFLGAV-------PHEEVPAY 275
Query: 659 YRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718
Y AD FV P+ E FGL ++EAM CGLP AT GG EII G +G + P P
Sbjct: 276 YA-AAD---VFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDP 331
Query: 719 DQAAELMAD 727
+ AE +
Sbjct: 332 EALAEAILR 340
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 9e-13
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 16/186 (8%)
Query: 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 628
DRS+P + + R+ K + L++ + + V +V+ AG + D E+AE E
Sbjct: 198 DRSRPYILFVGRITRQKGVPHLLDAV---HYIPKDVQVVLCAG------APDTPEVAE-E 247
Query: 629 KMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTC 688
+ + WI + EL FV P+ YE G+ +EAM C
Sbjct: 248 VRQAVALLDRNRTGIIWINKMLPKEELVELLSNAE----VFVCPSIYEPLGIVNLEAMAC 303
Query: 689 GLPTFATCHGGPAEIIEHGASGF--HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 746
G P A+ GG E++ G +GF D D +A +P KK+ G
Sbjct: 304 GTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAG 363
Query: 747 LKRIYE 752
KR E
Sbjct: 364 RKRAEE 369
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 64.9 bits (158), Expect = 1e-11
Identities = 42/176 (23%), Positives = 64/176 (36%), Gaps = 22/176 (12%)
Query: 539 KQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK-N 597
+ +HG LL + + + RL K + L+E +
Sbjct: 75 GIPLVLTVHGVNRSLLEGVPLSLLALS----IGLADKVFVGRLAPEKGLDDLIEAFALLK 130
Query: 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGE 657
+ +L +V+AG + + A + + +
Sbjct: 131 ERGPDLK--LVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLA------------ 176
Query: 658 LYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI 713
L AD FV P+ E FGL V+EAM CGLP AT GGP EI+E G +G +
Sbjct: 177 LLLAAAD---VFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 64.9 bits (159), Expect = 5e-11
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 668 AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 727
FV P+ E FGL V+EAM GLP A GGPA+I+ G +G ++P + A +A
Sbjct: 269 VFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAA 328
Query: 728 FFGKCKENPSHWKKIS 743
+P ++++
Sbjct: 329 LL----ADPELRRRMA 340
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 7e-11
Identities = 43/185 (23%), Positives = 72/185 (38%), Gaps = 24/185 (12%)
Query: 567 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAE 626
SD + ++ RL K L+E + K ++ L +V G D E
Sbjct: 173 SSDLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIV-G--------DGPEREA 223
Query: 627 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAM 686
+E L+K L+ + + N + Y A FV + +E F + ++EAM
Sbjct: 224 LEA---LIKELGLEDRVILLGFTKN------IEEYYAKAS-IFVLTSRFEGFPMVLLEAM 273
Query: 687 TCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDG 745
GLP + C GP+EIIE G +G + + AE + E+ K++
Sbjct: 274 AFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM----EDEELRKRMGAN 329
Query: 746 GLKRI 750
+
Sbjct: 330 ARESA 334
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 60.3 bits (147), Expect = 1e-09
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 657 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 716
E + + + + E FGL ++EAM CG P A G E++E G +GF +D
Sbjct: 236 EKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS- 294
Query: 717 HPDQAAELMAD 727
++ A +A
Sbjct: 295 -VEELAAAVAR 304
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 58.8 bits (143), Expect = 5e-09
Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 626 EIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEA 685
E L + L ++ Q + EL IAD F+ P+ E+FGL +EA
Sbjct: 238 ERSPAERLARELGLQDDVLFLGKQDHVE---ELLS-IADL---FLLPSEKESFGLAALEA 290
Query: 686 MTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDG 745
M CG+P A+ GG E+++HG +GF +D E MA++ E+ W++ S
Sbjct: 291 MACGVPVVASNAGGIPEVVKHGETGFLVDVGD----VEAMAEYALSLLEDDELWQEFSRA 346
Query: 746 GLKRIYER 753
R ER
Sbjct: 347 ARNRAAER 354
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 6e-09
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 663 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAA 722
AD FV P+ E F T +EA+ CG P A GG +I++HG +G+ P P+ A
Sbjct: 265 AD---VFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLA 321
Query: 723 E 723
E
Sbjct: 322 E 322
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 7e-09
Identities = 45/194 (23%), Positives = 74/194 (38%), Gaps = 23/194 (11%)
Query: 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEK 629
K I+ + RL K + L+E + K ++ +LV+ AG + +
Sbjct: 201 PDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVI-AGPDEGG---------YRAE 250
Query: 630 MHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG 689
+ ++ L+ + + + L AD FV P+ E FG+ V EA+ CG
Sbjct: 251 LKQIAAALGLEDRVTFTGMLYGEDKAAALAD--AD---LFVLPSHSENFGIVVAEALACG 305
Query: 690 LPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749
P T E+IE+G G+ +D D A + E P K + + G
Sbjct: 306 TPVVTTDKVPWQELIEYGC-GWVVDD-DVDALAAALRRAL----ELPQRLKAMGENGRAL 359
Query: 750 IYERLVVSSDGIVD 763
+ ER S I
Sbjct: 360 VEERF--SWTAIAQ 371
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 3e-08
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 21/156 (13%)
Query: 574 IVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633
++ ++ RL K+ L++ + K + L++ D A +E++
Sbjct: 190 VILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAG---------DGPLRATLERL--- 237
Query: 634 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTF 693
+K L + + + + + A Y AD FV + +E FGL V EAM C LP
Sbjct: 238 IKALGLSNRVKLLGLRDDIA---AYYN-AADL---FVLSSAWEGFGLVVAEAMACELPVV 290
Query: 694 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 729
AT GG E++ G SG + P+ A + +
Sbjct: 291 ATDAGGVREVV--GDSGLIVPISDPEALANKIDEIL 324
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 7e-08
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 667 GAFVQPAFYEAFGLTVVEAMTCGLP--TFATCHGGPAEIIEHGASGFHIDPYHPDQAAEL 724
+ + E FGL+++EA++ GLP ++ + GP+EIIE G +G+ + + AE
Sbjct: 280 QLSLLTSQSEGFGLSLMEALSHGLPVISYDV-NYGPSEIIEDGENGYLVPKGDIEALAEA 338
Query: 725 MADFFGKCKENPSHWKKISDG 745
+ + +P +K S+
Sbjct: 339 IIELL----NDPKLLQKFSEA 355
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 8e-08
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKE 734
E F L + EA+ G+P A+ GG AE++ G +G P + A + +
Sbjct: 273 PENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----D 328
Query: 735 NPSHWKKISDGGLKRI 750
+P +++ G
Sbjct: 329 DPDLLERLRAGIEPPR 344
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 1e-07
Identities = 46/185 (24%), Positives = 73/185 (39%), Gaps = 22/185 (11%)
Query: 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 628
P+ +ARL K + L+E V L++V G D + I EIE
Sbjct: 185 PEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLV-GDGDEE---NPAAILEIE 240
Query: 629 KMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTC 688
K+ L+G+ ++ + + EL AD FV P++ E ++EAM
Sbjct: 241 KLG-------LEGRVEFLGFRDDVP---ELLA-AAD---VFVLPSYREGLPRVLLEAMAM 286
Query: 689 GLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLK 748
G P AT G E + G +GF + P + A+ + E+P ++ K
Sbjct: 287 GRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLI----EDPELRARMGQAARK 342
Query: 749 RIYER 753
R E
Sbjct: 343 RAEEE 347
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 52.5 bits (127), Expect = 4e-07
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 657 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 716
EL A + AF+ PA E FG+ VEAM G P A GG E + G +G +
Sbjct: 254 ELRDLYARAR-AFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQ 311
Query: 717 HPDQAAELMADF 728
+ A + F
Sbjct: 312 TVESLAAAVERF 323
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 7e-07
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 669 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 728
FV + E F ++EAM CGLP AT G AE++ G +GF + P P+ AE +
Sbjct: 272 FVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELV--GDTGFLVPPGDPEALAEAIEAL 329
Query: 729 FGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVD 763
+P+ + + + +RI E S + +V+
Sbjct: 330 L----ADPALRQALGEAARERIEEN--FSIEAMVE 358
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 1e-06
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 669 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 728
FV P+ E T++EAM GLP AT GG E+++HG +G + P A +A
Sbjct: 276 FVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALV----PPGDAVALARA 331
Query: 729 FGKCKENPSHWKKISDGGLKRIYER 753
+P+ + G R ++
Sbjct: 332 LQPYVSDPAARRAHGAAGRARAEQQ 356
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 1e-06
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 676 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMA 726
EAFG T VEA G P A+ HGG E + G +G + P AE +A
Sbjct: 275 EAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLV----PPGDAEALA 321
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 51.0 bits (123), Expect = 1e-06
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 10/89 (11%)
Query: 668 AFVQPAF------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQA 721
FV P+ E + ++EAM GLP +T G E++E G +G + P P+
Sbjct: 258 LFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGDPEAL 317
Query: 722 AELMADFFGKCKENPSHWKKISDGGLKRI 750
A+ + ++P +++ + G R+
Sbjct: 318 ADAIERLL----DDPELRREMGEAGRARV 342
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 1e-06
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 676 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKEN 735
E+FGL +EAM CG+P A+ GG E++EHG +GF D + AE E+
Sbjct: 283 ESFGLAALEAMACGVPVIASNAGGIPEVVEHGVTGFLCDVGDVETMAEYAISLL----ED 338
Query: 736 PSHWKKISDGGLKRIYERLVVSSDGIVD 763
++ S +R ER S+ IV
Sbjct: 339 EELLQRFSAAARERAKERF--DSEKIVP 364
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 3e-06
Identities = 47/199 (23%), Positives = 75/199 (37%), Gaps = 29/199 (14%)
Query: 555 FDPEQNDEHVGTLSDRSKPIVF-SMARLDHVKNMTGLVECYGKNSQLRELVNLVVV-AGY 612
F+P D+ L V + RL KN+ L+ + + + V LV+V G
Sbjct: 184 FEPVDGDDERRKLGIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP 243
Query: 613 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRY--IADTKGAFV 670
+REE+ EL + L + + EL Y AD FV
Sbjct: 244 -------EREEL------EELARELGLADRVIFTGFVPRE----ELPDYYKAAD---LFV 283
Query: 671 QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 730
+ E GL ++EAM GLP A G +++ G +GF P A L
Sbjct: 284 FASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDEALAEAL-----L 338
Query: 731 KCKENPSHWKKISDGGLKR 749
+ ++P +++S +
Sbjct: 339 RLLQDPELRRRLSKNAEES 357
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 4e-06
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKE 734
E FG+ +EAM G P A GGP E + G +GF +P P++ AE M
Sbjct: 309 NEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLA----N 363
Query: 735 NPSHWKKISDGGLKRIYER 753
+P ++ G KR+ E+
Sbjct: 364 DPDLADRMGAAGRKRVKEK 382
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 1e-05
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Query: 657 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI--- 713
ELY+ IAD V P+F+E +E M GLP T G +E+IE G +G+ I
Sbjct: 296 ELYQ-IADVG---VLPSFHEQCSYVAIEMMMHGLPLIGTTSTGLSEMIEDGLNGYKIPIK 351
Query: 714 -DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
+ + + + K + K++ +R Y
Sbjct: 352 EYRDYVELDKKELVQKLLKLLSSSDEAKQMGKNA-RRRYLE 391
|
Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 2e-05
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 676 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGF 711
E + ++EA G+P AT HGG E +E G +G
Sbjct: 281 EGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGL 316
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 33/152 (21%), Positives = 58/152 (38%), Gaps = 10/152 (6%)
Query: 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 628
+ ++ R+ K + L++ + K + + LVVV +K + ++
Sbjct: 190 SPDETVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVL 249
Query: 629 KMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTC 688
+ + + R I Y +AD V EAF + VEAM
Sbjct: 250 EAAKRIGD-------RCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAA 300
Query: 689 GLPTFATCHGGPAEIIEHGASGFHI-DPYHPD 719
G P A+ GG E + G +G+H+ +P D
Sbjct: 301 GKPVLASTKGGITEFVLEGITGYHLAEPMTSD 332
|
Length = 380 |
| >gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 2e-04
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 10/81 (12%)
Query: 676 EAFGLTVVEAMTCGLPTFATCHGGPAEIIE------HGASGFHIDPYHPDQAAELMADFF 729
E L ++EAM G+P AT G E+IE G +G + P P+ A +
Sbjct: 381 EGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAIL--- 437
Query: 730 GKCKENPSHWKKISDGGLKRI 750
+ ++P + + + G KR+
Sbjct: 438 -RLLKDPELRRAMGEAGRKRV 457
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475 |
| >gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 3e-04
Identities = 62/243 (25%), Positives = 84/243 (34%), Gaps = 34/243 (13%)
Query: 504 LPGLYRVVHGIDVF-DPKF------NIVSPGADMDIYFPYSEK-QKRLTALHG------- 548
+PG R VH +D F DP+ IV D S L A G
Sbjct: 110 IPGFVRTVHHLDDFDDPRLAACQERAIVEA----DAVLCVSAAWAAELRAEWGIDATVVP 165
Query: 549 ---SIEQLLFDPEQNDEHVGT-LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELV 604
+ + D + L R P V ++ ++ KN L+E + R
Sbjct: 166 NGVDAARFSPAADAADAALRRRLGLRGGPYVLAVGGIEPRKNTIDLLEAFALLRARRPQA 225
Query: 605 NLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD 664
LV+ G + R E EL LD I A LYR AD
Sbjct: 226 QLVIAGGATLFDYDAYRREFEAR--AAEL----GLDPGAVVITGPVPDADLPALYR-CAD 278
Query: 665 TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAEL 724
AF P+ E FGL V+EA+ G+P A+ E + DP PD A+
Sbjct: 279 ---AFAFPSLKEGFGLVVLEALASGIPVVASDIAPFTEYLGRF-DAAWADPSDPDSIADA 334
Query: 725 MAD 727
+A
Sbjct: 335 LAL 337
|
A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373 |
| >gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 4e-04
Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 24/121 (19%)
Query: 638 KLDGQFRWIAAQT-NRAR-----NGELYRYI---ADTKGAFVQPAFYEAFGLTVVEAMTC 688
+L+ R +A + R + L I AD + P+ +E GLT + AM
Sbjct: 332 ELEEALRELAERYPGNVRVIIGYDEALAHLIYAGAD---FILMPSRFEPCGLTQLYAMRY 388
Query: 689 GLPTFATCHGGPAEIIEHG------ASGFHIDPYHPDQ---AAELMADFFGKCKENPSHW 739
G GG A+ + G +GF + Y P A + +++PS W
Sbjct: 389 GTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLY---RQDPSLW 445
Query: 740 K 740
+
Sbjct: 446 E 446
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 0.001
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 670 VQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 728
P++ E+FGL +EA CG P A GG + G +G +D + P A+ +A
Sbjct: 307 AVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARL 365
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 0.002
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 657 ELYRYIADTKG-AFVQPAFYEAFGLTVVEAMTCGLPTFAT--CHGGPAEIIEHGASGFHI 713
E +A F EAFG+ ++EAM G P +T GG + HG +G +
Sbjct: 256 EKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSY-VNLHGVTGLVV 314
Query: 714 DPYHPDQAAELM 725
P P AE +
Sbjct: 315 PPGDPAALAEAI 326
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.003
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 669 FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII---EHGASGFHIDPYHPDQAAEL 724
FV P+ E G V+EAM G+P A GG +II + G +GF P D E
Sbjct: 335 FVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEK 393
|
Length = 465 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 781 | |||
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 100.0 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 100.0 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.98 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.97 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.97 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.96 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.96 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.96 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.95 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.95 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.94 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.94 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.93 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.93 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.92 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.9 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.89 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.89 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.88 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.87 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.87 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.86 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.82 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.82 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.81 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.8 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.78 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.77 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.76 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.76 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.75 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.72 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.66 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.65 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.6 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.55 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.54 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.53 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.34 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.34 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.26 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.25 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.24 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.23 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.22 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.22 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.19 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.03 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.96 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.92 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.83 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 98.81 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.78 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 98.69 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.69 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.65 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.56 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.5 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.32 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 98.27 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.26 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.16 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.05 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 97.94 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 97.89 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 97.8 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.71 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 97.56 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 97.41 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 97.41 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 97.35 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.26 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 97.17 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 97.16 | |
| PLN02208 | 442 | glycosyltransferase family protein | 97.15 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 97.14 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 97.07 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 97.04 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 97.02 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 96.99 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 96.88 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 96.83 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 96.77 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 96.54 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 96.39 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 96.37 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 96.3 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 96.26 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 96.25 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 96.2 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 96.12 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 96.08 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 96.06 | |
| PLN00414 | 446 | glycosyltransferase family protein | 96.03 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 95.73 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 95.73 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 95.59 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 95.49 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 95.33 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 95.19 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 95.12 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 94.99 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 94.48 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 93.37 | |
| PLN02764 | 453 | glycosyltransferase family protein | 93.04 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 92.54 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 92.0 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 91.12 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 89.92 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 89.48 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 89.01 | |
| PF10933 | 364 | DUF2827: Protein of unknown function (DUF2827); In | 88.91 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 88.71 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 87.55 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 85.17 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 84.11 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 83.63 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 82.85 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 80.59 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 80.2 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 80.14 |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-188 Score=1633.54 Aligned_cols=767 Identities=81% Similarity=1.269 Sum_probs=739.7
Q ss_pred CCCCCCCCCcchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceee
Q 003987 1 MAAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAI 80 (781)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 80 (781)
|++++|+|++||+|+++++|++|||+|++||+||+++||++||+|||+++|+++++++.++.++.+|+||++|++|||||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 81 (815)
T PLN00142 2 AAAPVLTRSHSIRERVPDALSQHRNELKALLSRYVAQGKGILQPHQLIDELEAVIDDDEERKKLLDGPFGDILRSTQEAI 81 (815)
T ss_pred CCcccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhhh
Confidence 56689999999999999999999999999999999999999999999999999987777788899999999999999999
Q ss_pred ecCCeEEEEEcCCCceEEEEEEecCcceeeecChHHHhhhcchhcccccCCCceeeeeccccccCCCCCCCCCCCCchhh
Q 003987 81 VLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQ 160 (781)
Q Consensus 81 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (781)
|.|||||||||||||+|||||||++||+||+|||+|||+|||+|||++.+++++|||||+|||++|||||+|+||||||+
T Consensus 82 ~~~~~~~~~~r~~~~~~~~~~~~~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~ 161 (815)
T PLN00142 82 VLPPFVALAVRPRPGVWEYVRVNVSELSVEELTVSEYLKFKEELVDGSWNDNFVLELDFEPFNASFPRPTLSSSIGNGVQ 161 (815)
T ss_pred ccCCeeEEEEcCCCcceEEEEEEhhhCceeeecHHHhhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred hhhhhhhcccCCCCCCchhHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCcc
Q 003987 161 FLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEK 240 (781)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (781)
|||||||||||+|+++++|||||||+|+|+|++|||||||+|+++||++|++|++||+++|+||||++|+++||+|||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (815)
T PLN00142 162 FLNRHLSSKLFRDKESLEPLLDFLRAHNHKGETLMLNDRIQTLSKLQSALRKAEEYLSKLPKDTPYSEFEHRFQELGLEK 241 (815)
T ss_pred HHHHHHHHhhccCchhhhhHHHHHHHhhcCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCCchHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcHHHHHHHHHHHHHhhcCCCcccHhhhhcCCCCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHH
Q 003987 241 GWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 320 (781)
Q Consensus 241 gwg~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~r~p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa 320 (781)
||||||+||+|||++|+|+|++|||++||+|++||||+|||+|||+||||+|.+++|+||||||++||+|||||||++|+
T Consensus 242 gwg~~~~~~~~~~~~l~~~~~~p~~~~~e~f~~~~p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~ 321 (815)
T PLN00142 242 GWGDTAERVLETIHLLLDLLQAPDPSTLEKFLGRIPMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEML 321 (815)
T ss_pred CcCccHHHHHHHHHHHHHHHhCCChhHHHHHHhhhhHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHH
Q 003987 321 LRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEI 400 (781)
Q Consensus 321 ~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i 400 (781)
++|+++||+|+|+|+|+||.++++.+++|+++.|.+.++++++|+|+||++.++++++|+||+++|||+..|+.++.+.+
T Consensus 322 ~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~ 401 (815)
T PLN00142 322 LRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEI 401 (815)
T ss_pred HHHHhcCCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999977899999999999999999999999999
Q ss_pred HHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEe
Q 003987 401 TAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (781)
Q Consensus 401 ~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt 480 (781)
.+..+++||+||+|||+++++|.++++++|||+|+|+|++++.|+..++.+|+..+..|+|++|+++|.++++.||+||+
T Consensus 402 ~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIa 481 (815)
T PLN00142 402 LAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIAMNHADFIIT 481 (815)
T ss_pred HHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHHHHhhhHHHh
Confidence 77767899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003987 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 481 ~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (781)
+|+++++++++.++||++|.+|+||++|++++|++++++|++|||||+|.+.|+|+.....+.+.+++.|++++|++.+.
T Consensus 482 sT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~ 561 (815)
T PLN00142 482 STYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQN 561 (815)
T ss_pred CcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999988888899999999999999999
Q ss_pred ccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003987 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~ 640 (781)
++++|++.++++++|+++||+++.||++.|++|++++.+.+++++|+|||++.++..+.+.++.++.++++++++++++.
T Consensus 562 ~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~ 641 (815)
T PLN00142 562 DEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLK 641 (815)
T ss_pred HHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCC
Confidence 99999887888999999999999999999999999998777889999999986555667788888889999999999999
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHH
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~ 720 (781)
++|+|+|.+.+..+.+++++++++++|+||+||++|+||++++||||||+|||||+.||+.|+|.+|++|++++|+|+++
T Consensus 642 ~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~ea 721 (815)
T PLN00142 642 GQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDE 721 (815)
T ss_pred CcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHH
Confidence 99999998888888899999999768999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 721 lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
+|++|.+++++|..|++.|++|+++|++++.++|||+.. ++.+.++.
T Consensus 722 LA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~--A~rll~L~ 768 (815)
T PLN00142 722 AANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIY--AERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHH--HHHHHHHH
Confidence 999999999889999999999999999999999999664 45555544
|
|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-181 Score=1577.35 Aligned_cols=744 Identities=73% Similarity=1.187 Sum_probs=716.6
Q ss_pred HHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceeeecCCeEEEEEcCCCceEEEEEEe
Q 003987 24 RNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVN 103 (781)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~r~~~~~~~~~~~~ 103 (781)
|++|++||+||+++||++||+|||+++|+++|.++.++.++.+|+||++|++||||||.|||||||||||||+|||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qe~~~~~~~~~~~~r~~~~~~~~~~~~ 80 (784)
T TIGR02470 1 RAELRQLLSRYVSQGKRYLLRHQLLDEFEQYCSDADKEKKLSESALGKLIFSTQEAIVLPPWVALAVRPRIGVWEYVRVN 80 (784)
T ss_pred ChHHHHHHHHHHhcCCCcccHHHHHHHHHHHhhhhhhhhhhccCcHHHHHHhhhhheecCCeeEEEEcCCCcceEEEEEE
Confidence 78999999999999999999999999999999776667889999999999999999999999999999999999999999
Q ss_pred cCcceeeecChHHHhhhcchhcccccCCCceeeeeccccccCCCCCCCCCCCCchhhhhhhhhhcccCCCCCCchhHHHH
Q 003987 104 VYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDF 183 (781)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (781)
++||+||+|||+|||+|||+|||++.+++++|||||+|||++|||||+||||||||+|||||||||||+|++++++||||
T Consensus 81 ~~~l~~~~~~~~~yl~~ke~~~~~~~~~~~~le~d~~pf~~~~p~~~~~~~ig~g~~~~~r~~s~~~~~~~~~~~~~~~~ 160 (784)
T TIGR02470 81 VEELSVEELTISEYLDFKEQLVNGHPNDGFVLELDFEPFNASFPRPSDSKSIGNGVQFLNRHLSSKLFQDPESMEPLLNF 160 (784)
T ss_pred hhhCceeeecHHHHhhhhHhhcCcccCCCceEEEecccccccCCCCCCcccccccHHHHHHHHHHHhcCCchhhhhHHHH
Confidence 99999999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcHHHHHHHHHHHHHhhcCC
Q 003987 184 LRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAP 263 (781)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~~p 263 (781)
||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||+||+|||++|+|+|++|
T Consensus 161 l~~~~~~g~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~gwg~~~~~~~~~~~~l~~~~~~p 240 (784)
T TIGR02470 161 LRVHNYNGIQLMINDRIQSVSHLQSQLRKAEEFLSALPPDTPYSEFEFELQELGFEPGWGDTAQRVLETLHLLDDLLEAP 240 (784)
T ss_pred HHHhccCCceeeecCCCCCHHHHHHHHHHHHHHHHhCCCCCChhHHHHHHHHhCCCCCcCccHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHhhhhcCCCCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCC
Q 003987 264 DPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPD 343 (781)
Q Consensus 264 ~~~~~~~f~~r~p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~ 343 (781)
||++||+|++||||+|||+|||+|||++|.+++|.||||||++||++|||+||++|+++|+++||+|+|+|+|+||.+++
T Consensus 241 ~~~~~e~f~~~~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~ 320 (784)
T TIGR02470 241 DPSVLEAFLGRIPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPD 320 (784)
T ss_pred ChhHHHHHHhhCCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCcceeeecCCCCeEEEEeccCCCcc-cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHH
Q 003987 344 AKGTTCNQRLERVSGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVA 422 (781)
Q Consensus 344 ~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva 422 (781)
+.++.|+++.+.+.++++++|+|+|+++..+ ++++|++|+++|||+..|+.++.+.+.+..+++||+||+|||+++++|
T Consensus 321 ~~~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva 400 (784)
T TIGR02470 321 AEGTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVA 400 (784)
T ss_pred ccccccccccccccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHH
Confidence 9999999999999999999999999999877 899999999999999999999999998777789999999999999999
Q ss_pred HHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhcccccccccccccc
Q 003987 423 SLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAF 502 (781)
Q Consensus 423 ~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f 502 (781)
.++++++|+|+|+|+|++++.|+..++.+|...+.+|+++++++++.++|+.||+|||+|+++++++++.++||++|..|
T Consensus 401 ~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~f 480 (784)
T TIGR02470 401 SLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAF 480 (784)
T ss_pred HHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccc
Confidence 99999999999999999999999999999998999999999999999999999999999999999999999999999999
Q ss_pred ccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeecc
Q 003987 503 TLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD 582 (781)
Q Consensus 503 ~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~ 582 (781)
+||++|++++|++++++|++|||||+|.+.|+|++....+....++.+++++|++++.++++|++.++++|+|+++||++
T Consensus 481 t~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~ 560 (784)
T TIGR02470 481 TMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLD 560 (784)
T ss_pred cccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCC
Confidence 99999999999999999999999999999999999888888888999999999999999999998888999999999999
Q ss_pred CCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHH
Q 003987 583 HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 662 (781)
Q Consensus 583 ~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~l 662 (781)
+.||++.|++|+++++..+++++|+|||++.++..+.|+++.+++++++++++++++.++|+|+|++.+..+.+++|+++
T Consensus 561 ~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~i 640 (784)
T TIGR02470 561 RVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYI 640 (784)
T ss_pred ccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHh
Confidence 99999999999999877777899999999987677888999999999999999999999999999877677788999999
Q ss_pred HccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 003987 663 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 742 (781)
Q Consensus 663 a~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~ 742 (781)
++++|+||+||++|+||++++||||||+|||||++||+.|+|.+|.+|++++|+|++++|++|.+++++|..||+.|++|
T Consensus 641 Ad~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~m 720 (784)
T TIGR02470 641 ADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKI 720 (784)
T ss_pred hccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 87789999999999999999999999999999999999999999999999999999999999999998888999999999
Q ss_pred HHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 743 SDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 743 s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
+++|++++.++|||+.. ++.+.++.
T Consensus 721 s~~a~~rV~~~FSW~~~--A~~ll~l~ 745 (784)
T TIGR02470 721 SQGGLQRIYEKYTWKIY--SERLLTLA 745 (784)
T ss_pred HHHHHHHHHHhCCHHHH--HHHHHHHH
Confidence 99999999999999764 34444443
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-175 Score=1416.40 Aligned_cols=550 Identities=76% Similarity=1.203 Sum_probs=475.6
Q ss_pred CCCcchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceeeecCCeE
Q 003987 7 SRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFV 86 (781)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 86 (781)
||++||+|+|+++|++||++|++||+||+++||+|||||||+++|+++|+++.++.++.+|+||++|++||||||.||||
T Consensus 1 tr~~s~~e~~~~~L~~~R~~l~~llsr~~~~gk~~l~r~~ll~ef~~~~~~~~~~~~~~~g~lg~ll~~tQEaIv~pp~v 80 (550)
T PF00862_consen 1 TRSHSIRERVPDTLSQHRNELKRLLSRYVAQGKRYLLRHDLLDEFEAYCEDDKEKLFLLSGPLGELLRSTQEAIVLPPWV 80 (550)
T ss_dssp -------GGGTTTGGGTTSHHHHHHHHHHHHHTSSEEEECHHHHHTHHHHSTTTGCCT--STHHHHHHTEEEEEECSSEE
T ss_pred CcchhHHHHHHHHHHHhHHHHHHHHHHHHHcCcccccHHHHHHHHHHHHhcccchhhcccchHHHHHHhcceeEecCCeE
Confidence 79999999999999999999999999999999999999999999999998777778888999999999999999999999
Q ss_pred EEEEcCCCceEEEEEEecCcceeeecChHHHhhhcchhcccccCCCceeeeeccccccCCCCCCCCCCCCchhhhhhhhh
Q 003987 87 AIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHL 166 (781)
Q Consensus 87 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (781)
|||||||||+|||||||+++|+||+|||+|||+|||+|||++++++++|||||+|||++||+|++||||||||+||||||
T Consensus 81 ~lavRPrpg~WeyvRv~~~~L~vE~ltvseyL~fKE~LV~~~~~~~~vLElDf~PFn~~~Prlt~s~sIGnGv~FLNR~L 160 (550)
T PF00862_consen 81 ALAVRPRPGVWEYVRVNVDDLSVEELTVSEYLKFKERLVDGSANDEFVLELDFEPFNASFPRLTDSSSIGNGVQFLNRHL 160 (550)
T ss_dssp EEEEEEETTEEEEEEEESSSSEEEEE-HHHHHHHHHHHHHSS-SSTTS-EEE-GGGHTTS----SGGGTTBHHHHHHHHH
T ss_pred EEEEcCCCccEEEEEEEhhhCcceecCHHHHHHHHHHHcCCccCCCCeeeeecccccccCCCCCCcccccccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCCchhHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcH
Q 003987 167 SSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTA 246 (781)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwg~~~ 246 (781)
|||||+|++++++||+|||.|+|+|++|||||||+|+++||+||++|++||+++|+||||++|+++||+|||||||||||
T Consensus 161 Ssklf~d~e~~~~Ll~fL~~h~~~G~~Lmlndri~s~~~L~~aL~~A~~~L~~~p~~tpy~~f~~~~q~~Gfe~GWG~ta 240 (550)
T PF00862_consen 161 SSKLFQDKESLEPLLDFLRVHNYNGQQLMLNDRIQSVSKLQSALRKAEEFLSKLPPDTPYSEFEHKLQELGFEPGWGDTA 240 (550)
T ss_dssp HHHHTT-HHHHHHHHHHHHH-EETTEEBSB-TT--SHHHHHHHHHHHHHHHHHS-TT-BHHHHHHHHHHHTB-B-S-SBH
T ss_pred HHHhcCChHHHHHHHHHHHHhccCCeEeeecCCCCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCCCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCcccHhhhhcCCCCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHC
Q 003987 247 EHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ 326 (781)
Q Consensus 247 ~~~~~~~~~~~~~~~~p~~~~~~~f~~r~p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~ 326 (781)
+||+|||++|+|+|+||||++||+|++||||+|+|||+||||||+|+||||+||||||++||+|||||||++|..++..+
T Consensus 241 ~rv~et~~lL~dll~aPdp~~LE~Fl~RiPmvf~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~ 320 (550)
T PF00862_consen 241 ERVLETMHLLSDLLEAPDPSTLEKFLSRIPMVFNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQ 320 (550)
T ss_dssp HHHHHHHHHHHHHHHS--HHHHHHHHHHS---SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCchHHHHHhhhcceeEEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCC
Q 003987 327 GLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQG 406 (781)
Q Consensus 327 GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~ 406 (781)
|.+|.|+|+|+||.+|++.+++|+++++++.|++|++|+|+||++.+|++++|+||+++|||++.|+.++.+++.+++++
T Consensus 321 gl~i~p~i~i~TRlIpd~~~t~~~q~le~~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~ 400 (550)
T PF00862_consen 321 GLDITPKIDIVTRLIPDAKGTTCNQRLEKVSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQG 400 (550)
T ss_dssp T-----EEEEEEE--TBTTCGGGTSSEEEETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCceeeecccccCCcCCCccccccccCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHH
Q 003987 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (781)
Q Consensus 407 kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (781)
+||+||+||+++|++|+++++++|||+|+|+|+++++||..++++|+.++.+|||+|||+||.++|+.||+|||||+||+
T Consensus 401 ~PdlI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QEI 480 (550)
T PF00862_consen 401 KPDLIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQEI 480 (550)
T ss_dssp --SEEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHH
T ss_pred CCcEEEeccCcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccC
Q 003987 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFD 556 (781)
Q Consensus 487 ~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~ 556 (781)
+|+++++||||+|.+||||+|||+++||++|+|||+|||||+|.++|+|++++++|++.+|++|+++||+
T Consensus 481 ~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt~~~~Rl~~~~~~ie~Llfs 550 (550)
T PF00862_consen 481 AGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIYFPYTEKERRLTSLHPEIEELLFS 550 (550)
T ss_dssp HB-SSSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS--TT-TTTS-GGGHHHHHHHHH-
T ss_pred cCCccccCCccchhhcchHhHHhhhccccccCCcccccCCCCCcceecCCccccccchhhhHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985
|
4.1.13 from EC in the following reaction: |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-57 Score=541.08 Aligned_cols=455 Identities=25% Similarity=0.443 Sum_probs=349.5
Q ss_pred ceeEEEEccCcCCccccc-CC-CCCcccceeehHHHHHHHHHHHHHHHHHCC--CceeecceEEEccCCCC-CCCccCcc
Q 003987 278 VFNVVILSPHGYFGQANV-LG-LPDTGGQVVYILDQVRALENEMLLRIKRQG--LDISPKILIVTRLIPDA-KGTTCNQR 352 (781)
Q Consensus 278 ~mrI~ivS~h~~~~~~~v-lg-~p~~GG~~vyvld~araL~~eLa~~L~~~G--heV~~~v~VvT~~~p~~-~~~~~~~~ 352 (781)
-|+|++||+||.|..+++ +| .+|||||.+||. +|+++|++.| |+|+ |+||.+.+. .+..|.+.
T Consensus 169 ~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~--------ELAraLa~~~gv~~Vd----l~TR~~~~~~~~~~y~~p 236 (1050)
T TIGR02468 169 KLYIVLISLHGLVRGENMELGRDSDTGGQVKYVV--------ELARALGSMPGVYRVD----LLTRQVSSPDVDWSYGEP 236 (1050)
T ss_pred ceEEEEEccccCccccCcccCCCCCCCChHHHHH--------HHHHHHHhCCCCCEEE----EEeCCcCccccccccCCc
Confidence 589999999999988887 88 499999999999 6666678888 8999 999997643 34456666
Q ss_pred eeee------------cCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHH-------c----CCCce
Q 003987 353 LERV------------SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAE-------L----QGFPD 409 (781)
Q Consensus 353 ~e~v------------~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~-------~----~~kpD 409 (781)
.|.+ ...+|++|+|+|+++.. +++++..+|||+..|...+...+.+. . ...||
T Consensus 237 ~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~----~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pD 312 (1050)
T TIGR02468 237 TEMLTPRSSENDGDEMGESSGAYIIRIPFGPRD----KYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPY 312 (1050)
T ss_pred cccccccccccccccccCCCCeEEEEeccCCCC----CCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC
Confidence 5433 34569999999999863 36788999999999999998887541 1 12499
Q ss_pred EEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCC----CChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHH
Q 003987 410 FIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYP----DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 410 IIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~----~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
|||+||++++.+|.++++.+++|+|+|.|++...++. .....+...+..|++..++.+|..+++.||.|||+|.++
T Consensus 313 vIHaHyw~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE 392 (1050)
T TIGR02468 313 VIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQE 392 (1050)
T ss_pred EEEECcchHHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHH
Confidence 9999999999999999999999999999999877643 122344566778899999999999999999999999999
Q ss_pred Hhhccccccccccccccccccceee-----eccCC---CCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCc
Q 003987 486 IAGTKNTVGQYESHTAFTLPGLYRV-----VHGID---VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDP 557 (781)
Q Consensus 486 ~~~~k~~v~qyes~~~f~l~~ly~v-----~~gi~---~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~ 557 (781)
+. .||..|.+|. |.+|++ ..|+. .+.+|+.|||||+|++.|.|......+... ..++....+
T Consensus 393 ~~------eq~~lY~~~~-~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~---~~~~~~~~~ 462 (1050)
T TIGR02468 393 IE------EQWGLYDGFD-VILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETE---GNEEHPAKP 462 (1050)
T ss_pred HH------HHHHHhccCC-chhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhc---ccccccccc
Confidence 87 3555454444 444443 23333 346799999999999999986432211000 000000000
Q ss_pred ccc--ccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccC--CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHH
Q 003987 558 EQN--DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLR--ELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (781)
Q Consensus 558 ~~~--~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~--~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~l 633 (781)
... .+....+.++++++|+++||+++.||++.|++||+++++.+ +++. +|+|++++. ........++...+.++
T Consensus 463 ~~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~-d~l~~~~~~~l~~L~~l 540 (1050)
T TIGR02468 463 DPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDI-DEMSSGSSSVLTSVLKL 540 (1050)
T ss_pred cchhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchh-hhhhccchHHHHHHHHH
Confidence 000 00011122678899999999999999999999999987543 3444 466776541 11111123456778899
Q ss_pred HHHcCCCCcEEEeccccCcCChHHHHHHHHccC----cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCe
Q 003987 634 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTK----GAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS 709 (781)
Q Consensus 634 i~elgL~~~V~flG~~~~~v~~~el~~~la~aa----dvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~ 709 (781)
++++++.++|.|+| .++.+++..+|+. + |+||+||++|+||++++||||||+|||+|+.||+.|+|.++.+
T Consensus 541 i~~lgL~g~V~FlG----~v~~edvp~lYr~-Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~n 615 (1050)
T TIGR02468 541 IDKYDLYGQVAYPK----HHKQSDVPDIYRL-AAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDN 615 (1050)
T ss_pred HHHhCCCCeEEecC----CCCHHHHHHHHHH-hhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCc
Confidence 99999999999999 5667788888874 4 7999999999999999999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhc
Q 003987 710 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 710 G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~ 772 (781)
|++++|.|++++|++|.+++ .|++.|++|+++|++++ ++|+|+. +++.|.+.+...
T Consensus 616 GlLVdP~D~eaLA~AL~~LL----~Dpelr~~m~~~gr~~v-~~FSWe~--ia~~yl~~i~~~ 671 (1050)
T TIGR02468 616 GLLVDPHDQQAIADALLKLV----ADKQLWAECRQNGLKNI-HLFSWPE--HCKTYLSRIASC 671 (1050)
T ss_pred EEEECCCCHHHHHHHHHHHh----hCHHHHHHHHHHHHHHH-HHCCHHH--HHHHHHHHHHHH
Confidence 99999999999999998887 89999999999999998 5799965 456666665543
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-55 Score=487.99 Aligned_cols=452 Identities=41% Similarity=0.599 Sum_probs=396.2
Q ss_pred ecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCccccCCcHHHHHHHHHHHHHhhcCCCcccHhhhhcC
Q 003987 195 MLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGR 274 (781)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~r 274 (781)
|+||++++.+.+|+++.+|+..++.. .+||+..|.+.+++.++++|||.++.+|.+++++++
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~-~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s----------------- 62 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLL-VSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS----------------- 62 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcc-cccccccchhheeeccccccCchHHHhHHHHHHHHh-----------------
Confidence 78999999999999999999999999 999999999999999999999999999999999988
Q ss_pred CCCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCccee
Q 003987 275 LPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLE 354 (781)
Q Consensus 275 ~p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e 354 (781)
++. +||.||+||+++|+++++++|+.++..+..+.+.+++++|.|++...|...+ +.++
T Consensus 63 ----------------~~~-~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~----~~~~ 121 (495)
T KOG0853|consen 63 ----------------GQD-VLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPILVVGDWLPRAMG----QFLE 121 (495)
T ss_pred ----------------ccc-ccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceEEEEeecCcccc----hhhh
Confidence 555 8999999999999999999999999999999999999999999999888765 4556
Q ss_pred eecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEE
Q 003987 355 RVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQC 434 (781)
Q Consensus 355 ~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v 434 (781)
...++.+++|+++|+. ++.+|+ +.+||++..++ .+...+.+.+++ ||++|.++++++..+.+++++.|++.+
T Consensus 122 ~~~~~~~~~il~~~~~----~~~k~~--~~~d~~i~d~~-~~~~~l~~~~~~-p~~~~~i~~~~h~~~~lla~r~g~~~~ 193 (495)
T KOG0853|consen 122 QVAGCAYLRILRIPFG----ILFKWA--EKVDPIIEDFV-SACVPLLKQLSG-PDVIIKIYFYCHFPDSLLAKRLGVLKV 193 (495)
T ss_pred hhhccceeEEEEeccc----hhhhhh--hhhceeecchH-HHHHHHHHHhcC-CcccceeEEeccchHHHhccccCccce
Confidence 6667779999999993 456677 88999999888 566777777777 999999999999999999999999999
Q ss_pred EEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhcccccccccccccccccc-ceeeecc
Q 003987 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPG-LYRVVHG 513 (781)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~-ly~v~~g 513 (781)
++.|.++..++...+.+|+.+...|+++++|+++...++.+| ++++++++++...+.++|+++..+++|. .++.+++
T Consensus 194 l~~~~l~~~e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~ 271 (495)
T KOG0853|consen 194 LYRHALDKIEEETTGLAWKILVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSG 271 (495)
T ss_pred eehhhhhhhhhhhhhccceEecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecc
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999 9999999
Q ss_pred CCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHH
Q 003987 514 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 593 (781)
Q Consensus 514 i~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA 593 (781)
+++|.++++++++|.|.+.+.+. .+.+++.|.+
T Consensus 272 ~d~~~~siN~~~pgkd~~l~l~a------~~~~~~~i~~----------------------------------------- 304 (495)
T KOG0853|consen 272 IDRFFPSINRFEPGKDQDLALPA------FTLLHDSIPE----------------------------------------- 304 (495)
T ss_pred cceEeeeeeecCCCCCceeehhh------HHhhhcccCC-----------------------------------------
Confidence 99999999999999999887772 1111111100
Q ss_pred HHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC
Q 003987 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (781)
Q Consensus 594 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 673 (781)
...++.+++++|+.. .++.++|+.++.++|+++++++++.++++|.-. .....+.|++++++..+|++|+
T Consensus 305 -----~~~~~~hl~~~g~~G--~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~---s~~~~~~yrl~adt~~v~~qPa 374 (495)
T KOG0853|consen 305 -----PSISSEHLVVAGSRG--YDERDSENVEYLKELLSLIEEYDLLGQFVWFLP---STTRVAKYRLAADTKGVLYQPA 374 (495)
T ss_pred -----CCCCceEEEEecCCC--ccccchhhHHHHHHHHHHHHHhCccCceEEEec---CCchHHHHHHHHhcceEEecCC
Confidence 112456666666321 457899999999999999999999766665532 2334566999999888999999
Q ss_pred CCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHH---HHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 674 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD---QAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 674 ~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~---~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
. |.||+|++|||+||+|||||+.||+.|+|.++.+|++++| +.+ .+|++| .+|..||++|.+|+++|++++
T Consensus 375 ~-E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~----~kl~~~p~l~~~~~~~G~~rV 448 (495)
T KOG0853|consen 375 N-EHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADAL----LKLRRDPELWARMGKNGLKRV 448 (495)
T ss_pred C-CCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHH----HHHhcCHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999999999999999999999999 555 366666 455599999999999999999
Q ss_pred HHhcCcch
Q 003987 751 YERLVVSS 758 (781)
Q Consensus 751 ~~~ysw~~ 758 (781)
++.|||+.
T Consensus 449 ~e~fs~~~ 456 (495)
T KOG0853|consen 449 KEMFSWQH 456 (495)
T ss_pred HHHHhHHH
Confidence 99999944
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-51 Score=463.29 Aligned_cols=425 Identities=28% Similarity=0.526 Sum_probs=316.5
Q ss_pred eeEEEEccCcCCcccc-cCCC-CCcccceeehHHHHHHHHHHHHHHHHHCCC--ceeecceEEEccCCCCC-CCccCcce
Q 003987 279 FNVVILSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKRQGL--DISPKILIVTRLIPDAK-GTTCNQRL 353 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~-vlg~-p~~GG~~vyvld~araL~~eLa~~L~~~Gh--eV~~~v~VvT~~~p~~~-~~~~~~~~ 353 (781)
+||+++|+||+|+|.+ ++|. |+.||+++|+. +|+++|+++|| +|+ |+|+.+++.. +..+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~--------~La~~L~~~G~~~~V~----v~t~~~~~~~~~~~~~~~~ 68 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVL--------ELARALARRSEVEQVD----LVTRLIKDAKVSPDYAQPI 68 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHH--------HHHHHHHhCCCCcEEE----EEeccccCcCCCCccCCCe
Confidence 4899999999999988 7775 99999999999 77778899997 999 9998765421 12333333
Q ss_pred eeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE
Q 003987 354 ERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 433 (781)
Q Consensus 354 e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~ 433 (781)
+.. .++++|+|+|+... .|.++...++|+..+...+.+.+.+. ..+|||||+|++.+++++.++++..++|+
T Consensus 69 ~~~--~~gv~v~r~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~DvIH~h~~~~~~~~~~~~~~~~~p~ 140 (439)
T TIGR02472 69 ERI--APGARIVRLPFGPR-----RYLRKELLWPYLDELADNLLQHLRQQ-GHLPDLIHAHYADAGYVGARLSRLLGVPL 140 (439)
T ss_pred eEe--CCCcEEEEecCCCC-----CCcChhhhhhhHHHHHHHHHHHHHHc-CCCCCEEEEcchhHHHHHHHHHHHhCCCE
Confidence 322 34789999998653 24455677888888887777766542 34799999999888999999999999999
Q ss_pred EEEecCCcccCCC---CChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceee
Q 003987 434 CTIAHALEKTKYP---DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRV 510 (781)
Q Consensus 434 v~t~H~l~~~k~~---~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v 510 (781)
|+|.|+....+.. .....++.+...|++......+..+++.+|.||++|.+++.. ++ ..
T Consensus 141 V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~------~~------------~~ 202 (439)
T TIGR02472 141 IFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEE------QY------------AL 202 (439)
T ss_pred EEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHH------HH------------Hh
Confidence 9999986432211 111112222333444444445778899999999999765431 11 11
Q ss_pred eccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHH
Q 003987 511 VHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGL 590 (781)
Q Consensus 511 ~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~L 590 (781)
..|++ ..|+.+||||+|.+.|.|......... +.+. ...++. ++++++|+++||+.+.||++.|
T Consensus 203 ~~~~~--~~ki~vIpnGvd~~~f~~~~~~~~~~~-----~~~~-------~~~~~~--~~~~~~i~~vGrl~~~Kg~~~l 266 (439)
T TIGR02472 203 YDSYQ--PERMQVIPPGVDLSRFYPPQSSEETSE-----IDNL-------LAPFLK--DPEKPPILAISRPDRRKNIPSL 266 (439)
T ss_pred ccCCC--ccceEEECCCcChhhcCCCCccccchh-----HHHH-------HHhhcc--ccCCcEEEEEcCCcccCCHHHH
Confidence 11333 679999999999998877532211000 0000 011232 4567899999999999999999
Q ss_pred HHHHHHhhccCCCeEEE-EEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccC---
Q 003987 591 VECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTK--- 666 (781)
Q Consensus 591 ieA~~~l~~~~~~v~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aa--- 666 (781)
++|++++....+..+++ |+|+|++ .........++.+++.++++++++.++|+|+| .++.+++..+|+. +
T Consensus 267 i~A~~~l~~~~~~~~l~li~G~g~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g----~~~~~~~~~~~~~-a~~~ 340 (439)
T TIGR02472 267 VEAYGRSPKLQEMANLVLVLGCRDD-IRKMESQQREVLQKVLLLIDRYDLYGKVAYPK----HHRPDDVPELYRL-AARS 340 (439)
T ss_pred HHHHHhChhhhhhccEEEEeCCccc-cccccHHHHHHHHHHHHHHHHcCCCceEEecC----CCCHHHHHHHHHH-Hhhc
Confidence 99998754333334454 5677654 11222233345566788899999999999999 5667889998884 4
Q ss_pred -cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 003987 667 -GAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDG 745 (781)
Q Consensus 667 -dvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~ 745 (781)
|+||+||.+|+||++++||||||+|||+|+.||+.|+|.++.+|++++|+|++++|++|.+++ +|++.+++|+++
T Consensus 341 ~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~ 416 (439)
T TIGR02472 341 RGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDAL----SDSSQWQLWSRN 416 (439)
T ss_pred CCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998887 899999999999
Q ss_pred HHHHHHHhcCcchhhhccchHHHH
Q 003987 746 GLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 746 a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
|++++.++|||+. +++.|++++
T Consensus 417 a~~~~~~~fsw~~--~~~~~~~l~ 438 (439)
T TIGR02472 417 GIEGVRRHYSWDA--HVEKYLRIL 438 (439)
T ss_pred HHHHHHHhCCHHH--HHHHHHHHh
Confidence 9999999999965 667787775
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-42 Score=386.31 Aligned_cols=399 Identities=22% Similarity=0.304 Sum_probs=291.8
Q ss_pred EEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCC
Q 003987 281 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360 (781)
Q Consensus 281 I~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~ 360 (781)
|++++.|+.|.. +.+..+.||.++|+. +|+++|+++||+|+ |+|.......+. ......
T Consensus 1 ~~~~~~~~~~~~--~~~~~~~GG~e~~v~--------~la~~L~~~G~~V~----v~~~~~~~~~~~-------~~~~~~ 59 (405)
T TIGR03449 1 VAMISMHTSPLQ--QPGTGDAGGMNVYIL--------ETATELARRGIEVD----IFTRATRPSQPP-------VVEVAP 59 (405)
T ss_pred CeEEeccCCccc--cCCCcCCCCceehHH--------HHHHHHhhCCCEEE----EEecccCCCCCC-------ccccCC
Confidence 678888887643 244455799999999 78888899999999 999764322111 111123
Q ss_pred CeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003987 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (781)
Q Consensus 361 ~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l 440 (781)
++++++++.....+ .+...+..++..|.....+.+......+||+||+|++.+++.+.++++..++|+|+|.|+.
T Consensus 60 ~~~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~~ 134 (405)
T TIGR03449 60 GVRVRNVVAGPYEG-----LDKEDLPTQLCAFTGGVLRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHTL 134 (405)
T ss_pred CcEEEEecCCCccc-----CCHHHHHHHHHHHHHHHHHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCCEEEeccch
Confidence 68888887654322 1111122222333333443333333458999999998888888889999999999999986
Q ss_pred cccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCc
Q 003987 441 EKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPK 520 (781)
Q Consensus 441 ~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k 520 (781)
...+. .++........ ......+...++.+|.++++|....+...+. .|.+ ..|
T Consensus 135 ~~~~~----~~~~~~~~~~~-~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~-------------------~~~~--~~k 188 (405)
T TIGR03449 135 AAVKN----AALADGDTPEP-EARRIGEQQLVDNADRLIANTDEEARDLVRH-------------------YDAD--PDR 188 (405)
T ss_pred HHHHH----HhccCCCCCch-HHHHHHHHHHHHhcCeEEECCHHHHHHHHHH-------------------cCCC--hhh
Confidence 43210 01000000000 0111234567899999999998765522111 1222 568
Q ss_pred eEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhcc
Q 003987 521 FNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL 600 (781)
Q Consensus 521 ~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~ 600 (781)
+.+||||+|.+.|.+.+....+ .++|+ ++++++|+++||+.+.||++.+++|++++.+.
T Consensus 189 i~vi~ngvd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~l~~~K~~~~li~a~~~l~~~ 247 (405)
T TIGR03449 189 IDVVAPGADLERFRPGDRATER-------------------ARLGL--PLDTKVVAFVGRIQPLKAPDVLLRAVAELLDR 247 (405)
T ss_pred EEEECCCcCHHHcCCCcHHHHH-------------------HhcCC--CCCCcEEEEecCCCcccCHHHHHHHHHHHHhh
Confidence 9999999999888765332211 33555 45788999999999999999999999999777
Q ss_pred CCC--eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003987 601 REL--VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 601 ~~~--v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
.++ ++|+|+|++... ...+.+.++++++++++.++|+|+| .++.+++..+++. +|++|+||..|+|
T Consensus 248 ~~~~~~~l~ivG~~~~~-------g~~~~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~l~~-ad~~v~ps~~E~~ 315 (405)
T TIGR03449 248 DPDRNLRVIVVGGPSGS-------GLATPDALIELAAELGIADRVRFLP----PRPPEELVHVYRA-ADVVAVPSYNESF 315 (405)
T ss_pred CCCcceEEEEEeCCCCC-------cchHHHHHHHHHHHcCCCceEEECC----CCCHHHHHHHHHh-CCEEEECCCCCCc
Confidence 666 999999974320 0023567888999999999999999 6778899999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcch
Q 003987 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 679 GltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~ 758 (781)
|++++|||+||+|||+|+.||..|+|.++.+|++++++|+++++++|.+++ .|++.+++|++++++.+ ++|||+.
T Consensus 316 g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l----~~~~~~~~~~~~~~~~~-~~fsw~~ 390 (405)
T TIGR03449 316 GLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLL----DDPRTRIRMGAAAVEHA-AGFSWAA 390 (405)
T ss_pred ChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HhCCHHH
Confidence 999999999999999999999999999999999999999999999998887 79999999999999987 7899976
Q ss_pred hhhccchHHHHHh
Q 003987 759 DGIVDPSPFVINV 771 (781)
Q Consensus 759 ~~il~~ye~ll~~ 771 (781)
+ ++.|++++..
T Consensus 391 ~--~~~~~~~y~~ 401 (405)
T TIGR03449 391 T--ADGLLSSYRD 401 (405)
T ss_pred H--HHHHHHHHHH
Confidence 5 4555555543
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=398.26 Aligned_cols=425 Identities=17% Similarity=0.187 Sum_probs=283.9
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccC-cceeee-
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN-QRLERV- 356 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~-~~~e~v- 356 (781)
|||++||.+.+|- ..+||+..+|. .|+++|+++||+|. |+|+.++........ ......
T Consensus 1 m~i~~vs~e~~P~-------~k~GGl~~~v~--------~L~~~L~~~G~~V~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (466)
T PRK00654 1 MKILFVASECAPL-------IKTGGLGDVVG--------ALPKALAALGHDVR----VLLPGYPAIREKLRDAQVVGRLD 61 (466)
T ss_pred CeEEEEEcccccC-------cccCcHHHHHH--------HHHHHHHHCCCcEE----EEecCCcchhhhhcCceEEEEee
Confidence 7999999998863 34899999999 77778899999999 999886543211000 000110
Q ss_pred --------cCCCCeEEEEeccCCCcccccccccccCchhh---HH---HHHHHHHHHHHHHcCCCceEEEEcCCCchHHH
Q 003987 357 --------SGTEHTHILRVPFRSEKGILRQWISRFDVWPY---LE---TFTEDVGSEITAELQGFPDFIIGNYSDGNLVA 422 (781)
Q Consensus 357 --------~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~y---l~---~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva 422 (781)
....++++++++.... ..+..++.| .. .|...+...+. .+..+|||||+|+|.+++++
T Consensus 62 ~~~~~~~~~~~~gv~v~~v~~~~~-------~~~~~~y~~~d~~~r~~~f~~~~~~~~~-~~~~~pDiiH~h~w~~~~~~ 133 (466)
T PRK00654 62 LFTVLFGHLEGDGVPVYLIDAPHL-------FDRPSGYGYPDNGERFAFFSWAAAEFAE-GLDPRPDIVHAHDWHTGLIP 133 (466)
T ss_pred eEEEEEEeEEcCCceEEEEeCHHH-------cCCCCCCCCcChHHHHHHHHHHHHHHHH-hcCCCCceEEECCcHHHHHH
Confidence 1124678888765321 112222222 11 23344444443 33569999999999999999
Q ss_pred HHHHHHc-----CCcEEEEecCCcccCCCCCh------hhHhhh-hccccchhhhhHHHHHHhhCCEEEecCHHHHhhcc
Q 003987 423 SLLAYKM-----GITQCTIAHALEKTKYPDSD------IYWKKF-DEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTK 490 (781)
Q Consensus 423 ~llar~~-----gvp~v~t~H~l~~~k~~~s~------~~~k~~-~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k 490 (781)
.++++.. ++|+|+|+|++......... +.+..+ .....+...+.....+++.||.|||+|+..++.+.
T Consensus 134 ~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~ 213 (466)
T PRK00654 134 ALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREIT 213 (466)
T ss_pred HHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhc
Confidence 9888763 79999999998654311100 000000 00111111223345678999999999987765332
Q ss_pred ccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhh-cchhhhccCccccccccCCCCC
Q 003987 491 NTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH-GSIEQLLFDPEQNDEHVGTLSD 569 (781)
Q Consensus 491 ~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~-~~i~~~l~~~~~~~~~~g~l~~ 569 (781)
+. + ..+.+.+.+ .....|+.+|+||+|.+.|.|.++..-.. .+. ..++....++...++++|+. +
T Consensus 214 ~~---~---~~~gl~~~~------~~~~~ki~vI~NGid~~~~~p~~~~~~~~-~~~~~~~~~k~~~k~~l~~~~gl~-~ 279 (466)
T PRK00654 214 TP---E---FGYGLEGLL------RARSGKLSGILNGIDYDIWNPETDPLLAA-NYSADDLEGKAENKRALQERFGLP-D 279 (466)
T ss_pred cc---c---CCcChHHHH------HhcccCceEecCCCCccccCCccCccccc-ccChhhhhchHHHHHHHHHHhCCC-C
Confidence 21 0 000111100 11256899999999999998854311000 000 00000000111234567874 3
Q ss_pred CCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE-ecc
Q 003987 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW-IAA 648 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~f-lG~ 648 (781)
++.++|+++||+.+.||++.|++|++++.+. +++|+|+|+|+. ...+.+++++++++ +++.+ .|+
T Consensus 280 ~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~~lvivG~g~~----------~~~~~l~~l~~~~~--~~v~~~~g~ 345 (466)
T PRK00654 280 DDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GGQLVLLGTGDP----------ELEEAFRALAARYP--GKVGVQIGY 345 (466)
T ss_pred CCCcEEEEeeccccccChHHHHHHHHHHHhc--CCEEEEEecCcH----------HHHHHHHHHHHHCC--CcEEEEEeC
Confidence 4688999999999999999999999998753 799999999854 34567888888886 45665 552
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------CeEEEECCCCHHHHH
Q 003987 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------ASGFHIDPYHPDQAA 722 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg------~~G~lv~p~d~~~lA 722 (781)
+.+.+..+++ ++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|++++|+|+++++
T Consensus 346 -----~~~~~~~~~~-~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la 419 (466)
T PRK00654 346 -----DEALAHRIYA-GADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLL 419 (466)
T ss_pred -----CHHHHHHHHh-hCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHH
Confidence 3344567778 5999999999999999999999999999999999999999988 899999999999999
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 723 ELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
++|.++++. ..+++.|.+|++++++ ++|||+.+ ++.|++++.
T Consensus 420 ~~i~~~l~~-~~~~~~~~~~~~~~~~---~~fsw~~~--a~~~~~lY~ 461 (466)
T PRK00654 420 RALRRALEL-YRQPPLWRALQRQAMA---QDFSWDKS--AEEYLELYR 461 (466)
T ss_pred HHHHHHHHH-hcCHHHHHHHHHHHhc---cCCChHHH--HHHHHHHHH
Confidence 999988732 2477789999888853 78999765 345555554
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-41 Score=369.92 Aligned_cols=392 Identities=32% Similarity=0.525 Sum_probs=298.0
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+|++.|+.|.. -.|.|+.||.++++. +|++.|+++||+|+ |+|...+..... .....
T Consensus 1 ~~~~~~~~~~~~~--~~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~~-------~~~~~ 59 (398)
T cd03800 1 RIALISLHGSPLA--QPGGADTGGQNVYVL--------ELARALARLGHEVD----IFTRRIDDALPP-------IVELA 59 (398)
T ss_pred CeEEEeccccccc--cCCCCCCCceeehHH--------HHHHHHhccCceEE----EEEecCCcccCC-------ccccc
Confidence 6899999976532 135689999999999 77777899999999 998664332111 01122
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~ 439 (781)
.++.+++++..... ..++..+++++..|...+.+.+... ..+||+||+|++..++++..+++..++|+|++.|+
T Consensus 60 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 133 (398)
T cd03800 60 PGVRVVRVPAGPAE-----YLPKEELWPYLDEFADDLLRFLRRE-GGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHS 133 (398)
T ss_pred cceEEEeccccccc-----CCChhhcchhHHHHHHHHHHHHHhc-CCCccEEEEecCccchHHHHHHhhcCCceEEEeec
Confidence 36788888765432 1233345666666766666666543 23899999999888888899999999999999998
Q ss_pred CcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003987 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 440 l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~ 519 (781)
+...........+. +........+..+++.+|.++++|......+... | +. ...
T Consensus 134 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~---~----------------~~--~~~ 187 (398)
T cd03800 134 LGAVKRRHLGAADT-----YEPARRIEAEERLLRAADRVIASTPQEAEELYSL---Y----------------GA--YPR 187 (398)
T ss_pred ccccCCcccccccc-----cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH---c----------------cc--ccc
Confidence 76543222111111 1122223446678999999999998765422111 0 11 144
Q ss_pred ceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc
Q 003987 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (781)
++.+||||+|.+.|.+........ ..++. ..++++|+++||+++.||++.+++++.++.+
T Consensus 188 ~~~vi~ng~~~~~~~~~~~~~~~~------------------~~~~~--~~~~~~i~~~gr~~~~k~~~~ll~a~~~l~~ 247 (398)
T cd03800 188 RIRVVPPGVDLERFTPYGRAEARR------------------ARLLR--DPDKPRILAVGRLDPRKGIDTLIRAYAELPE 247 (398)
T ss_pred ccEEECCCCCccceecccchhhHH------------------Hhhcc--CCCCcEEEEEcccccccCHHHHHHHHHHHHH
Confidence 689999999998876654322110 11233 4567899999999999999999999999988
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCc
Q 003987 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (781)
Q Consensus 600 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 679 (781)
..++++|+++|++.... .......++.+++++++.++|.|+| .++.+++..+++. +|++++||..|+||
T Consensus 248 ~~~~~~l~i~G~~~~~~------~~~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adi~l~ps~~e~~~ 316 (398)
T cd03800 248 LRERANLVIVGGPRDDI------LAMDEEELRELARELGVIDRVDFPG----RVSREDLPALYRA-ADVFVNPALYEPFG 316 (398)
T ss_pred hCCCeEEEEEECCCCcc------hhhhhHHHHHHHHhcCCCceEEEec----cCCHHHHHHHHHh-CCEEEecccccccC
Confidence 78899999999987621 1122345778888999999999999 6778899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 680 ltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
++++|||+||+|||+|+.||..|+++++++|++++++|+++++++|.+++ .|++.+++|++++++.+.++|||+..
T Consensus 317 ~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~ 392 (398)
T cd03800 317 LTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLL----TDPALRRRLSRAGLRRARARYTWERV 392 (398)
T ss_pred cHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999999999999998887 89999999999999999999999764
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=381.80 Aligned_cols=435 Identities=17% Similarity=0.181 Sum_probs=292.0
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCc-----ce
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ-----RL 353 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~-----~~ 353 (781)
|||+++|...+|- -.+||+..++- .|+++|+++||+|. |+|+.++......... ..
T Consensus 1 m~i~~vs~E~~P~-------~k~GGl~~~v~--------~L~~aL~~~G~~v~----v~~p~y~~~~~~~~~~~~~~~~~ 61 (473)
T TIGR02095 1 MRVLFVAAEMAPF-------AKTGGLADVVG--------ALPKALAALGHDVR----VLLPAYGCIEDEVDDQVKVVELV 61 (473)
T ss_pred CeEEEEEeccccc-------cCcCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcChhhhhccCeEEEEEE
Confidence 7999999988752 24899999999 77777899999999 9998876432110000 00
Q ss_pred e--------e----ecCCCCeEEEEeccCC---Ccc-cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCC
Q 003987 354 E--------R----VSGTEHTHILRVPFRS---EKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSD 417 (781)
Q Consensus 354 e--------~----v~~~~~~~I~rvp~~~---~~~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~ 417 (781)
+ . ....+++.++++.... ..+ +... +..+.......|...+...+.. ...+|||||+|.|.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~v~~~~i~~~~~~~r~~~~y~~--~~~d~~~r~~~f~~a~~~~~~~-~~~~~DiiH~hdw~ 138 (473)
T TIGR02095 62 DLSVGPRTLYVKVFEGVVEGVPVYFIDNPSLFDRPGGIYGD--DYPDNAERFAFFSRAAAELLSG-LGWQPDVVHAHDWH 138 (473)
T ss_pred EEeecCceeEEEEEEEEECCceEEEEECHHHcCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHh-cCCCCCEEEECCcH
Confidence 0 0 0111356677664332 000 0000 0011111122344445554443 35699999999999
Q ss_pred chHHHHHHHHHcC---CcEEEEecCCcccCCCCCh-hhH-----hhhh-ccccchhhhhHHHHHHhhCCEEEecCHHHHh
Q 003987 418 GNLVASLLAYKMG---ITQCTIAHALEKTKYPDSD-IYW-----KKFD-EKYHFSCQFTADLIAMNNADFIITSTYQEIA 487 (781)
Q Consensus 418 ~~lva~llar~~g---vp~v~t~H~l~~~k~~~s~-~~~-----k~~~-~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~ 487 (781)
+++++.++++..+ +|+|+|+|++......... +.+ ..+. ..+.+...+.....+++.||.|+|+|+..++
T Consensus 139 ~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ 218 (473)
T TIGR02095 139 TALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAR 218 (473)
T ss_pred HHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHH
Confidence 9999999988876 9999999998643321111 111 0000 1111111233456689999999999987765
Q ss_pred hccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCC
Q 003987 488 GTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTL 567 (781)
Q Consensus 488 ~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l 567 (781)
.+... ..++.+.+.+ .....++.+|+||+|.+.|.|..+......--....+.....+...++++|+.
T Consensus 219 ei~~~------~~~~~l~~~l------~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~ 286 (473)
T TIGR02095 219 EILTP------EFGYGLDGVL------KARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLP 286 (473)
T ss_pred HhcCC------cCCccchhHH------HhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCC
Confidence 33221 0001111100 11256999999999999998754311000000000000000112234567885
Q ss_pred CCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003987 568 SDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (781)
Q Consensus 568 ~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG 647 (781)
.++++++|+++||+.+.||++.+++|+.++.+. +++|+|+|+|+. ...+.+++++++++ +++.+.+
T Consensus 287 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~l~~~~~~~~--~~v~~~~ 352 (473)
T TIGR02095 287 VDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDP----------ELEEALRELAERYP--GNVRVII 352 (473)
T ss_pred ccCCCCEEEEEecCccccChHHHHHHHHHHHHc--CcEEEEECCCCH----------HHHHHHHHHHHHCC--CcEEEEE
Confidence 445889999999999999999999999998753 599999999853 33567777887764 5788887
Q ss_pred cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC------CeEEEECCCCHHHH
Q 003987 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG------ASGFHIDPYHPDQA 721 (781)
Q Consensus 648 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg------~~G~lv~p~d~~~l 721 (781)
..+.+++..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||+.|+|.++ .+|+++++.|++++
T Consensus 353 ----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~l 427 (473)
T TIGR02095 353 ----GYDEALAHLIYA-GADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGAL 427 (473)
T ss_pred ----cCCHHHHHHHHH-hCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHH
Confidence 455667788888 5999999999999999999999999999999999999999998 89999999999999
Q ss_pred HHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003987 722 AELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 722 A~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
+++|.+++.....|++.|++|+++++ .++|||+++ ++.|++++..
T Consensus 428 a~~i~~~l~~~~~~~~~~~~~~~~~~---~~~fsw~~~--a~~~~~~Y~~ 472 (473)
T TIGR02095 428 LAALSRALRLYRQDPSLWEALQKNAM---SQDFSWDKS--AKQYVELYRS 472 (473)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHh---ccCCCcHHH--HHHHHHHHHh
Confidence 99999888544459999999999885 368999765 4667777653
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=389.48 Aligned_cols=458 Identities=15% Similarity=0.148 Sum_probs=303.2
Q ss_pred HHHhhcCCCcccHhhhhc--CC--CCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCcee
Q 003987 256 LLDILQAPDPSTLEKFLG--RL--PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDIS 331 (781)
Q Consensus 256 ~~~~~~~p~~~~~~~f~~--r~--p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~ 331 (781)
-.++.+.+|...+..|+. +. .+-|||++||.-..| .-.+||..-++- .|.++|+++||+|.
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~mkILfVasE~aP-------~aKtGGLaDVv~--------sLPkAL~~~GhdV~ 519 (977)
T PLN02939 455 YLSCKGKNEREAVENFLKLTLSGTSSGLHIVHIAAEMAP-------VAKVGGLADVVS--------GLGKALQKKGHLVE 519 (977)
T ss_pred HHHHhcCchHHHHHHHHHhccCCCCCCCEEEEEEccccc-------ccccccHHHHHH--------HHHHHHHHcCCeEE
Confidence 345567777776666654 22 245899999987775 246899998888 67777899999999
Q ss_pred ecceEEEccCCCCCCCccC-c-----cee-eecC-----------CCCeEEEEeccCCCcccccccccccCchhh-----
Q 003987 332 PKILIVTRLIPDAKGTTCN-Q-----RLE-RVSG-----------TEHTHILRVPFRSEKGILRQWISRFDVWPY----- 388 (781)
Q Consensus 332 ~~v~VvT~~~p~~~~~~~~-~-----~~e-~v~~-----------~~~~~I~rvp~~~~~~~~~~~isr~~i~~y----- 388 (781)
|+++.++........ . ... ...+ .+|+.++.+...... .+..|..++.+
T Consensus 520 ----VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~GV~vyfId~~~~~----~fF~R~~iYg~~Dn~~ 591 (977)
T PLN02939 520 ----IVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWTGTVEGLPVYFIEPQHPS----KFFWRAQYYGEHDDFK 591 (977)
T ss_pred ----EEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEEEEECCeeEEEEecCCch----hccCCCCCCCCccHHH
Confidence 999987643200000 0 000 0000 123444444211000 01122223311
Q ss_pred -HHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH------cCCcEEEEecCCcccCCCC-Chh-----hHhhh
Q 003987 389 -LETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK------MGITQCTIAHALEKTKYPD-SDI-----YWKKF 455 (781)
Q Consensus 389 -l~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~------~gvp~v~t~H~l~~~k~~~-s~~-----~~k~~ 455 (781)
+..|+..++..+. ..+.+|||||||.|.+++++.++.+. .++|.|+|+|++..+.... ..+ .+..+
T Consensus 592 RF~~FsrAaLe~~~-~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l 670 (977)
T PLN02939 592 RFSYFSRAALELLY-QSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQL 670 (977)
T ss_pred HHHHHHHHHHHHHH-hcCCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHc
Confidence 1233433444343 33579999999999999875554432 3589999999986544221 111 11111
Q ss_pred h---cc-ccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCC
Q 003987 456 D---EK-YHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMD 531 (781)
Q Consensus 456 ~---~~-y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~ 531 (781)
. .. ++|..++..-+..+..||.|+|+|+..+..+... + +..|.+. +.....|+.+|+||+|.+
T Consensus 671 ~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te---~----G~GL~~~------L~~~~~Kl~gIlNGID~e 737 (977)
T PLN02939 671 DRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSE---G----GRGLQDT------LKFHSKKFVGILNGIDTD 737 (977)
T ss_pred cChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHH---h----ccchHHH------hccccCCceEEecceehh
Confidence 0 00 0111222223345667999999999887643321 0 1112221 122367999999999999
Q ss_pred CCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCC-CCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEe
Q 003987 532 IYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSD-RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVA 610 (781)
Q Consensus 532 ~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~-~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG 610 (781)
.|.|.++.--...--...++....++...++++|+..+ ++.|+|+++||+.+.||++.+++|+.++.+ ++++|+|+|
T Consensus 738 ~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dvqLVIvG 815 (977)
T PLN02939 738 TWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGGQFVLLG 815 (977)
T ss_pred hcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCCEEEEEe
Confidence 99987542100000000011111223344567888532 467999999999999999999999988765 479999999
Q ss_pred CcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC
Q 003987 611 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL 690 (781)
Q Consensus 611 ~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl 690 (781)
+|+.+ .+.+.++++++++++.++|+|+| ..+......+|+ ++|+||+||.+|+||++++|||+||+
T Consensus 816 dGp~~---------~~e~eL~~La~~l~l~drV~FlG----~~de~lah~IYA-aADIFLmPSr~EPfGLvqLEAMAyGt 881 (977)
T PLN02939 816 SSPVP---------HIQREFEGIADQFQSNNNIRLIL----KYDEALSHSIYA-ASDMFIIPSMFEPCGLTQMIAMRYGS 881 (977)
T ss_pred CCCcH---------HHHHHHHHHHHHcCCCCeEEEEe----ccCHHHHHHHHH-hCCEEEECCCccCCcHHHHHHHHCCC
Confidence 99751 34567889999999999999999 455556678888 59999999999999999999999999
Q ss_pred cEEEcCcccccccccc---------CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh--
Q 003987 691 PTFATCHGGPAEIIEH---------GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD-- 759 (781)
Q Consensus 691 PVVaT~~gG~~EiI~d---------g~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~-- 759 (781)
|+|++++||+.|+|.+ +.+||+++++|+++++++|.+++..+..||+.|++|+++++ .+.|||+.+
T Consensus 882 PPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~ 958 (977)
T PLN02939 882 VPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSAS 958 (977)
T ss_pred CEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHH
Confidence 9999999999999875 57999999999999999999988666678999999998764 478999776
Q ss_pred hhccchHHHH
Q 003987 760 GIVDPSPFVI 769 (781)
Q Consensus 760 ~il~~ye~ll 769 (781)
.+.+.|++++
T Consensus 959 qYeeLY~~ll 968 (977)
T PLN02939 959 QYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHH
Confidence 4444455544
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=374.45 Aligned_cols=396 Identities=12% Similarity=0.109 Sum_probs=280.4
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCC---ccCcceee
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGT---TCNQRLER 355 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~---~~~~~~e~ 355 (781)
|||+|+|.+++ |+.||.+.++. +|+++|.++||+|+ |+|+......+. ........
T Consensus 1 mkIlii~~~~~---------P~~~g~~~~~~--------~l~~~L~~~G~~V~----vit~~~~~~~~~~~~~~~~~~~~ 59 (412)
T PRK10307 1 MKILVYGINYA---------PELTGIGKYTG--------EMAEWLAARGHEVR----VITAPPYYPQWRVGEGYSAWRYR 59 (412)
T ss_pred CeEEEEecCCC---------CCccchhhhHH--------HHHHHHHHCCCeEE----EEecCCCCCCCCCCcccccccce
Confidence 79999997765 56799999998 77778899999999 999762111110 00101111
Q ss_pred ecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcE
Q 003987 356 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQ 433 (781)
Q Consensus 356 v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~--~lva~llar~~gvp~ 433 (781)
.....+++++|+|...... ...+. .+..+ ..|.......+.+....+||+||+|.+.. ...+.+++++.++|+
T Consensus 60 ~~~~~~i~v~r~~~~~~~~--~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~Div~~~~p~~~~~~~~~~~~~~~~~~~ 134 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQ--PSGLK--RLLHL-GSFALSSFFPLLAQRRWRPDRVIGVVPTLFCAPGARLLARLSGART 134 (412)
T ss_pred eeecCCeEEEEccccCCCC--ccHHH--HHHHH-HHHHHHHHHHHhhccCCCCCEEEEeCCcHHHHHHHHHHHHhhCCCE
Confidence 1123478999998653210 00000 11111 12333333333332236899999987653 466778889999999
Q ss_pred EEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeecc
Q 003987 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 513 (781)
Q Consensus 434 v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~g 513 (781)
++++|+.+............ ....++. ...+..+++.||.||++|....+..++ .|
T Consensus 135 v~~~~d~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~ad~ii~~S~~~~~~~~~--------------------~~ 190 (412)
T PRK10307 135 WLHIQDYEVDAAFGLGLLKG--GKVARLA--TAFERSLLRRFDNVSTISRSMMNKARE--------------------KG 190 (412)
T ss_pred EEEeccCCHHHHHHhCCccC--cHHHHHH--HHHHHHHHhhCCEEEecCHHHHHHHHH--------------------cC
Confidence 99999865321100000000 0000111 124667889999999999987652211 13
Q ss_pred CCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHH
Q 003987 514 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 593 (781)
Q Consensus 514 i~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA 593 (781)
++ ..++.+||||+|.+.|.|....... ..++.+|+ ++++++|+|+||+.+.||++.|++|
T Consensus 191 ~~--~~~i~vi~ngvd~~~~~~~~~~~~~----------------~~~~~~~~--~~~~~~i~~~G~l~~~kg~~~li~a 250 (412)
T PRK10307 191 VA--AEKVIFFPNWSEVARFQPVADADVD----------------ALRAQLGL--PDGKKIVLYSGNIGEKQGLELVIDA 250 (412)
T ss_pred CC--cccEEEECCCcCHhhcCCCCccchH----------------HHHHHcCC--CCCCEEEEEcCccccccCHHHHHHH
Confidence 33 5689999999999888765321100 01133565 5667899999999999999999999
Q ss_pred HHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC
Q 003987 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (781)
Q Consensus 594 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 673 (781)
++++.+ .++++|+|+|+|+. .+.++++++++++. +|+|+| .++.+++..+++. +|++|+||
T Consensus 251 ~~~l~~-~~~~~l~ivG~g~~------------~~~l~~~~~~~~l~-~v~f~G----~~~~~~~~~~~~~-aDi~v~ps 311 (412)
T PRK10307 251 ARRLRD-RPDLIFVICGQGGG------------KARLEKMAQCRGLP-NVHFLP----LQPYDRLPALLKM-ADCHLLPQ 311 (412)
T ss_pred HHHhcc-CCCeEEEEECCChh------------HHHHHHHHHHcCCC-ceEEeC----CCCHHHHHHHHHh-cCEeEEee
Confidence 998854 57899999999976 67788899999996 799999 5677899999995 99999999
Q ss_pred CCCC----CcHHHHHHHHcCCcEEEcCccc--cccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 003987 674 FYEA----FGLTVVEAMTCGLPTFATCHGG--PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (781)
Q Consensus 674 ~~E~----fGltvlEAMa~GlPVVaT~~gG--~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~ 747 (781)
..|+ +|.+++|||+||+|||+|+.|| ..|++. ++|++++++|+++++++|.+++ +|++.+++|+++|+
T Consensus 312 ~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~ 385 (412)
T PRK10307 312 KAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALA----RQALLRPKLGTVAR 385 (412)
T ss_pred ccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHH
Confidence 9998 5777899999999999998876 458886 5899999999999999998887 89999999999999
Q ss_pred HHHHHhcCcchhhhccchHHHHHh
Q 003987 748 KRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 748 ~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
+++.++|||+. +++.|+++++.
T Consensus 386 ~~~~~~fs~~~--~~~~~~~~~~~ 407 (412)
T PRK10307 386 EYAERTLDKEN--VLRQFIADIRG 407 (412)
T ss_pred HHHHHHcCHHH--HHHHHHHHHHH
Confidence 99999999966 44555555544
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=372.30 Aligned_cols=366 Identities=15% Similarity=0.157 Sum_probs=270.2
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++..+ |..||.++++. +|++.|+++||+|. |+|+..+...+. + ...
T Consensus 1 kI~~v~~~~~---------p~~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~------~--~~~ 51 (398)
T cd03796 1 RICMVSDFFY---------PNLGGVETHIY--------QLSQCLIKRGHKVV----VITHAYGNRVGI------R--YLT 51 (398)
T ss_pred CeeEEeeccc---------cccccHHHHHH--------HHHHHHHHcCCeeE----EEeccCCcCCCc------c--ccc
Confidence 7999997665 56899999999 77788899999999 998764322111 0 112
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEEe
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTIA 437 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~--lva~llar~~gvp~v~t~ 437 (781)
.++.++++|...... ...+. ....+...+.+.+. +.+|||||+|...+. ..+.++++..++|+|++.
T Consensus 52 ~~i~v~~~p~~~~~~-------~~~~~-~~~~~~~~l~~~~~---~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~ 120 (398)
T cd03796 52 NGLKVYYLPFVVFYN-------QSTLP-TFFGTFPLLRNILI---RERITIVHGHQAFSALAHEALLHARTMGLKTVFTD 120 (398)
T ss_pred CceeEEEecceeccC-------Ccccc-chhhhHHHHHHHHH---hcCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence 357888888754211 00011 11112222223333 348999999987653 446777888999999999
Q ss_pred cCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003987 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (781)
Q Consensus 438 H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f 517 (781)
|+..... +..... +. ......++.+|.+|++|....+... ...+++
T Consensus 121 h~~~~~~----~~~~~~----~~-----~~~~~~~~~~d~ii~~s~~~~~~~~-------------------~~~~~~-- 166 (398)
T cd03796 121 HSLFGFA----DASSIH----TN-----KLLRFSLADVDHVICVSHTSKENTV-------------------LRASLD-- 166 (398)
T ss_pred ccccccc----chhhHH----hh-----HHHHHhhccCCEEEEecHhHhhHHH-------------------HHhCCC--
Confidence 9864211 000000 00 1123467899999999987643100 001222
Q ss_pred CCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHh
Q 003987 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (781)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (781)
..++.+||||+|.+.|.+.... .++++++|+++||+.+.||++.|++|+.++
T Consensus 167 ~~k~~vi~ngvd~~~f~~~~~~----------------------------~~~~~~~i~~~grl~~~Kg~~~li~a~~~l 218 (398)
T cd03796 167 PERVSVIPNAVDSSDFTPDPSK----------------------------RDNDKITIVVISRLVYRKGIDLLVGIIPEI 218 (398)
T ss_pred hhhEEEEcCccCHHHcCCCccc----------------------------CCCCceEEEEEeccchhcCHHHHHHHHHHH
Confidence 5689999999998877654321 035678999999999999999999999999
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCC
Q 003987 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (781)
Q Consensus 598 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 677 (781)
.+..++++|+|+|+|+. .+.++++++++++.++|.|+| .++.+++..+++. +|++|+||..|+
T Consensus 219 ~~~~~~~~l~i~G~g~~------------~~~l~~~~~~~~l~~~v~~~G----~~~~~~~~~~l~~-ad~~v~pS~~E~ 281 (398)
T cd03796 219 CKKHPNVRFIIGGDGPK------------RILLEEMREKYNLQDRVELLG----AVPHERVRDVLVQ-GHIFLNTSLTEA 281 (398)
T ss_pred HhhCCCEEEEEEeCCch------------HHHHHHHHHHhCCCCeEEEeC----CCCHHHHHHHHHh-CCEEEeCChhhc
Confidence 88889999999999865 567889999999999999999 6677899999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003987 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 678 fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~ 757 (781)
||++++|||+||+|||+|+.||..|++.++. +++++ .|+++++++|.+++ .++.....+++++++++.++|||+
T Consensus 282 ~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~-~~~~~l~~~l~~~l----~~~~~~~~~~~~~~~~~~~~fs~~ 355 (398)
T cd03796 282 FCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAE-PDVESIVRKLEEAI----SILRTGKHDPWSFHNRVKKMYSWE 355 (398)
T ss_pred cCHHHHHHHHcCCCEEECCCCCchhheeCCc-eeecC-CCHHHHHHHHHHHH----hChhhhhhHHHHHHHHHHhhCCHH
Confidence 9999999999999999999999999998764 44454 48999999999887 566666678899999999999998
Q ss_pred hh--hhccchHHHHH
Q 003987 758 SD--GIVDPSPFVIN 770 (781)
Q Consensus 758 ~~--~il~~ye~ll~ 770 (781)
.+ .+++.|++++.
T Consensus 356 ~~~~~~~~~y~~l~~ 370 (398)
T cd03796 356 DVAKRTEKVYDRILQ 370 (398)
T ss_pred HHHHHHHHHHHHHhc
Confidence 76 55556666553
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=390.51 Aligned_cols=405 Identities=14% Similarity=0.064 Sum_probs=278.7
Q ss_pred ceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCcc-Ccce-ee
Q 003987 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTC-NQRL-ER 355 (781)
Q Consensus 278 ~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~-~~~~-e~ 355 (781)
+|||++||.+..|- -.+||...+|. .|+++|+++||+|. |+|+.++....... .... ..
T Consensus 587 pM~Il~VSsE~~P~-------aKvGGLgDVV~--------sLp~ALa~~Gh~V~----VitP~Y~~i~~~~~~~~~~~~~ 647 (1036)
T PLN02316 587 PMHIVHIAVEMAPI-------AKVGGLGDVVT--------SLSRAVQDLNHNVD----IILPKYDCLNLSHVKDLHYQRS 647 (1036)
T ss_pred CcEEEEEEcccCCC-------CCcCcHHHHHH--------HHHHHHHHcCCEEE----EEecCCcccchhhcccceEEEE
Confidence 48999999998863 35899999999 77777899999999 99998764210000 0000 00
Q ss_pred e-----------cCCCCeEEEEeccCCCcccccccccccCch------hhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc
Q 003987 356 V-----------SGTEHTHILRVPFRSEKGILRQWISRFDVW------PYLETFTEDVGSEITAELQGFPDFIIGNYSDG 418 (781)
Q Consensus 356 v-----------~~~~~~~I~rvp~~~~~~~~~~~isr~~i~------~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~ 418 (781)
+ ...+++.++.+.... + +..+..++ ..+..|+..++..+.. ...+|||||+|+|.+
T Consensus 648 ~~~~~~~~~v~~~~~~GV~vyfl~~~~--~----~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~-~~~~PDIIHaHDW~t 720 (1036)
T PLN02316 648 YSWGGTEIKVWFGKVEGLSVYFLEPQN--G----MFWAGCVYGCRNDGERFGFFCHAALEFLLQ-SGFHPDIIHCHDWSS 720 (1036)
T ss_pred eccCCEEEEEEEEEECCcEEEEEeccc--c----ccCCCCCCCchhHHHHHHHHHHHHHHHHHh-cCCCCCEEEECCChH
Confidence 0 011245555554221 1 11111122 1223344444444433 356899999999999
Q ss_pred hHHHHHHHHHc------CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhcccc
Q 003987 419 NLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNT 492 (781)
Q Consensus 419 ~lva~llar~~------gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~ 492 (781)
++++.++++.+ ++|+|+|+|++.... ++ ...++..||.|+|+|+..+..+...
T Consensus 721 alva~llk~~~~~~~~~~~p~V~TiHnl~~~~---------------n~------lk~~l~~AD~ViTVS~tya~EI~~~ 779 (1036)
T PLN02316 721 APVAWLFKDHYAHYGLSKARVVFTIHNLEFGA---------------NH------IGKAMAYADKATTVSPTYSREVSGN 779 (1036)
T ss_pred HHHHHHHHHhhhhhccCCCCEEEEeCCcccch---------------hH------HHHHHHHCCEEEeCCHHHHHHHHhc
Confidence 99988887753 589999999864211 00 1246789999999999876532210
Q ss_pred ccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhh-hhcchhhhccCccccccccCCCCCCC
Q 003987 493 VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTA-LHGSIEQLLFDPEQNDEHVGTLSDRS 571 (781)
Q Consensus 493 v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~-~~~~i~~~l~~~~~~~~~~g~l~~~~ 571 (781)
.++.....|+.+|+||||.+.|.|.++....... ....++-........++++|+. +++
T Consensus 780 -------------------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~-~~d 839 (1036)
T PLN02316 780 -------------------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK-QAD 839 (1036)
T ss_pred -------------------cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC-ccc
Confidence 0122124699999999999998876432100000 0000000000111234568884 246
Q ss_pred CCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC--CCcEEEeccc
Q 003987 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL--DGQFRWIAAQ 649 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL--~~~V~flG~~ 649 (781)
.|+|+++|||.+.||++.|++|+.++.+ .+++|+|+|+|+++ .+.+.++++++++++ +++|.|.|.
T Consensus 840 ~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~qlVIvG~Gpd~---------~~e~~l~~La~~Lg~~~~~rV~f~g~- 907 (1036)
T PLN02316 840 LPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQVVLLGSAPDP---------RIQNDFVNLANQLHSSHHDRARLCLT- 907 (1036)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHHhh--cCcEEEEEeCCCCH---------HHHHHHHHHHHHhCccCCCeEEEEec-
Confidence 8999999999999999999999999865 37999999999761 335678889998876 578999883
Q ss_pred cCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC-------------CeEEEECCC
Q 003987 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG-------------ASGFHIDPY 716 (781)
Q Consensus 650 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg-------------~~G~lv~p~ 716 (781)
.+......+|+ ++|+||+||++|+||++.+|||+||+|+|++++||++|+|.++ .+||++++.
T Consensus 908 ---~de~lah~iya-aADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~ 983 (1036)
T PLN02316 908 ---YDEPLSHLIYA-GADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGA 983 (1036)
T ss_pred ---CCHHHHHHHHH-hCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCC
Confidence 22222346777 5999999999999999999999999999999999999999884 699999999
Q ss_pred CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 717 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 717 d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
|+++++.+|.+++... ++....+++.+++.+.+.|||+.+ ++.|++++.
T Consensus 984 d~~aLa~AL~raL~~~---~~~~~~~~~~~r~~m~~dFSW~~~--A~~Y~~LY~ 1032 (1036)
T PLN02316 984 DAAGVDYALNRAISAW---YDGRDWFNSLCKRVMEQDWSWNRP--ALDYMELYH 1032 (1036)
T ss_pred CHHHHHHHHHHHHhhh---hhhHHHHHHHHHHHHHhhCCHHHH--HHHHHHHHH
Confidence 9999999999888422 344556778888888899999765 466666664
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=373.66 Aligned_cols=439 Identities=16% Similarity=0.174 Sum_probs=288.8
Q ss_pred CCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCc--cCc--
Q 003987 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT--CNQ-- 351 (781)
Q Consensus 276 p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~--~~~-- 351 (781)
|| |||+++|.-..| .-.|||..-.+- .|.++|+++||+|. |+++.+..-.... ...
T Consensus 4 ~~-~~il~v~~E~~p-------~~k~Ggl~dv~~--------~Lp~al~~~g~~v~----v~~P~y~~~~~~~~~~~~~~ 63 (489)
T PRK14098 4 RN-FKVLYVSGEVSP-------FVRVSALADFMA--------SFPQALEEEGFEAR----IMMPKYGTINDRKFRLHDVL 63 (489)
T ss_pred CC-cEEEEEeecchh-------hcccchHHHHHH--------HHHHHHHHCCCeEE----EEcCCCCchhhhhhccccce
Confidence 55 999999987775 357899887777 66777899999999 9988765432110 000
Q ss_pred ceeee--cCCCCeEEEEec--cCCCcc---c-c--cccccccCch----------hhHH---HHHHHHHHHHHHHcCCCc
Q 003987 352 RLERV--SGTEHTHILRVP--FRSEKG---I-L--RQWISRFDVW----------PYLE---TFTEDVGSEITAELQGFP 408 (781)
Q Consensus 352 ~~e~v--~~~~~~~I~rvp--~~~~~~---~-~--~~~isr~~i~----------~yl~---~f~~~~~~~i~~~~~~kp 408 (781)
....+ .-.....+.++- ..+..+ + + ..+..|..++ .-.+ .|...+...+. ....+|
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~-~~~~~p 142 (489)
T PRK14098 64 RLSDIEVPLKEKTDLLHVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQ-RLGWKP 142 (489)
T ss_pred EEEEEEEeecCeeEEEEEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHH-hcCCCC
Confidence 01010 000011222110 000000 0 0 0111222222 1122 33333444443 235689
Q ss_pred eEEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCcccCCCCChhhH-----hhhhccccchhhhhHHHHHHhhCC
Q 003987 409 DFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYPDSDIYW-----KKFDEKYHFSCQFTADLIAMNNAD 476 (781)
Q Consensus 409 DIIh~~~~~~~lva~llar~~-------gvp~v~t~H~l~~~k~~~s~~~~-----k~~~~~y~f~~~~~~e~~a~~~AD 476 (781)
||||+|+|.+++++.++++.. ++|+|+|+|++..+......... ........+...+...+.+++.||
T Consensus 143 DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~~i~~ad 222 (489)
T PRK14098 143 DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYTGVEHAD 222 (489)
T ss_pred CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHHHHHhcC
Confidence 999999999999999888765 79999999997654322111110 100000011112334566889999
Q ss_pred EEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhh-cchhhhcc
Q 003987 477 FIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH-GSIEQLLF 555 (781)
Q Consensus 477 ~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~-~~i~~~l~ 555 (781)
.|+|+|+..++.+.+.. ...+.+++..+ ....|+.+|+||+|.+.|.|.++..-+. .+. ..++...-
T Consensus 223 ~VitVS~~~a~ei~~~~-----~~~~gl~~~l~------~~~~kl~~I~NGID~~~~~p~~d~~~~~-~~~~~~~~~k~~ 290 (489)
T PRK14098 223 LLTTTSPRYAEEIAGDG-----EEAFGLDKVLE------ERKMRLHGILNGIDTRQWNPSTDKLIKK-RYSIERLDGKLE 290 (489)
T ss_pred cceeeCHHHHHHhCcCC-----CCCcChHHHHH------hcCCCeeEEeCCccccccCCcccccccc-cCCcchhhhHHH
Confidence 99999998876433210 01112222111 1156999999999999998865321000 000 00000001
Q ss_pred CccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH
Q 003987 556 DPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (781)
Q Consensus 556 ~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~ 635 (781)
++...++.+|++.++++++|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+. .+.+.++++++
T Consensus 291 ~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~ 358 (489)
T PRK14098 291 NKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--LDIQLVICGSGDK----------EYEKRFQDFAE 358 (489)
T ss_pred HHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--cCcEEEEEeCCCH----------HHHHHHHHHHH
Confidence 11223356788766788999999999999999999999999875 3799999999864 34578888888
Q ss_pred HcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc----CCeEE
Q 003987 636 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH----GASGF 711 (781)
Q Consensus 636 elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d----g~~G~ 711 (781)
++ .++|.|+| .++.+++..+++ ++|+||+||.+|+||++.+|||+||+|+|++++||..|+|.+ +.+|+
T Consensus 359 ~~--~~~V~~~g----~~~~~~~~~~~a-~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~ 431 (489)
T PRK14098 359 EH--PEQVSVQT----EFTDAFFHLAIA-GLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGF 431 (489)
T ss_pred HC--CCCEEEEE----ecCHHHHHHHHH-hCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCcee
Confidence 87 47899999 566778889999 599999999999999999999999999999999999998864 67999
Q ss_pred EECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhc
Q 003987 712 HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 712 lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~ 772 (781)
+++++|+++++++|.++++ +..|++.|+++++++. .++|||+.+ ++.|++++..+
T Consensus 432 l~~~~d~~~la~ai~~~l~-~~~~~~~~~~~~~~~~---~~~fsw~~~--a~~y~~lY~~~ 486 (489)
T PRK14098 432 IFHDYTPEALVAKLGEALA-LYHDEERWEELVLEAM---ERDFSWKNS--AEEYAQLYREL 486 (489)
T ss_pred EeCCCCHHHHHHHHHHHHH-HHcCHHHHHHHHHHHh---cCCCChHHH--HHHHHHHHHHH
Confidence 9999999999999988763 4478999999887663 478999765 35566555543
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-39 Score=354.86 Aligned_cols=376 Identities=23% Similarity=0.292 Sum_probs=269.8
Q ss_pred eeEEEEccCcCCcccccCCCCC-cccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeec
Q 003987 279 FNVVILSPHGYFGQANVLGLPD-TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~-~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~ 357 (781)
|||++++.... |+ .||.++++. +|+++|+++ |+|+ |+|..... .
T Consensus 1 mkI~~i~~~~~---------p~~~GG~~~~v~--------~l~~~l~~~-~~v~----v~~~~~~~-------------~ 45 (388)
T TIGR02149 1 MKVTVLTREYP---------PNVYGGAGVHVE--------ELTRELARL-MDVD----VRCFGDQR-------------F 45 (388)
T ss_pred CeeEEEecccC---------ccccccHhHHHH--------HHHHHHHHh-cCee----EEcCCCch-------------h
Confidence 79999987544 44 499999999 666667776 7887 66643211 0
Q ss_pred CCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003987 358 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 437 (781)
Q Consensus 358 ~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~ 437 (781)
...++.+.+++..... ......+..+..++. ......+||+||+|.+.+++.+.++++..++|++++.
T Consensus 46 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p~v~~~ 113 (388)
T TIGR02149 46 DSEGLTVKGYRPWSEL---------KEANKALGTFSVDLA---MANDPVDADVVHSHTWYTFLAGHLAKKLYDKPLVVTA 113 (388)
T ss_pred cCCCeEEEEecChhhc---------cchhhhhhhhhHHHH---HhhCCCCCCeEeecchhhhhHHHHHHHhcCCCEEEEe
Confidence 1235677766543210 111122222222221 1111347999999998888778877888899999999
Q ss_pred cCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003987 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (781)
Q Consensus 438 H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f 517 (781)
|++.+....... .....|.+.. ..+..+++.+|.||++|....+.+.+. | .|++
T Consensus 114 h~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~ad~vi~~S~~~~~~~~~~---~---------------~~~~-- 167 (388)
T TIGR02149 114 HSLEPLRPWKEE----QLGGGYKLSS--WAEKTAIEAADRVIAVSGGMREDILKY---Y---------------PDLD-- 167 (388)
T ss_pred eccccccccccc----ccccchhHHH--HHHHHHHhhCCEEEEccHHHHHHHHHH---c---------------CCCC--
Confidence 987543211000 0111122211 235678899999999998765532211 0 1222
Q ss_pred CCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHh
Q 003987 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (781)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (781)
..++.+||||+|.+.|.|......+ .++|+ ++++++|+++||+.+.||++.|++|++++
T Consensus 168 ~~~i~vi~ng~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~Grl~~~Kg~~~li~a~~~l 226 (388)
T TIGR02149 168 PEKVHVIYNGIDTKEYKPDDGNVVL-------------------DRYGI--DRSRPYILFVGRITRQKGVPHLLDAVHYI 226 (388)
T ss_pred cceEEEecCCCChhhcCCCchHHHH-------------------HHhCC--CCCceEEEEEcccccccCHHHHHHHHHHH
Confidence 5689999999999888765432221 23555 56788999999999999999999999987
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC-CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCC
Q 003987 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL-DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (781)
Q Consensus 598 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL-~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 676 (781)
. ++++++++|+|++ ..+..+.+++.+.+++. .++|.|++ +.++.+++..+++. +|++|+||.+|
T Consensus 227 ~---~~~~l~i~g~g~~--------~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~-aDv~v~ps~~e 291 (388)
T TIGR02149 227 P---KDVQVVLCAGAPD--------TPEVAEEVRQAVALLDRNRTGIIWIN---KMLPKEELVELLSN-AEVFVCPSIYE 291 (388)
T ss_pred h---hcCcEEEEeCCCC--------cHHHHHHHHHHHHHhccccCceEEec---CCCCHHHHHHHHHh-CCEEEeCCccC
Confidence 5 4689999998865 11234567777777765 34588765 25778899999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH------HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP------DQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 677 ~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~------~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
+||++++|||+||+|||+|+.||..|++.++.+|++++++|+ ++++++|.+++ +|++.+++|++++++.+
T Consensus 292 ~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~a~~~~ 367 (388)
T TIGR02149 292 PLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILL----ADPELAKKMGIAGRKRA 367 (388)
T ss_pred CCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 88999998777 89999999999999999
Q ss_pred HHhcCcchhhhccchHHHH
Q 003987 751 YERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 751 ~~~ysw~~~~il~~ye~ll 769 (781)
.++|||+.+ ++.|.+++
T Consensus 368 ~~~~s~~~~--~~~~~~~y 384 (388)
T TIGR02149 368 EEEFSWGSI--AKKTVEMY 384 (388)
T ss_pred HHhCCHHHH--HHHHHHHH
Confidence 999999765 34444444
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=366.08 Aligned_cols=433 Identities=17% Similarity=0.132 Sum_probs=288.7
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCc--cee---
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ--RLE--- 354 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~--~~e--- 354 (781)
||++||+-.+|- ..+||...++. .|+++|++.||+|. |+|+.++......... ...
T Consensus 1 ~Il~v~~E~~p~-------~k~GGl~~~~~--------~L~~aL~~~G~~V~----Vi~p~y~~~~~~~~~~~~~~~~~~ 61 (476)
T cd03791 1 KVLFVASEVAPF-------AKTGGLGDVVG--------ALPKALAKLGHDVR----VIMPKYGRILDELRGQLLVLRLFG 61 (476)
T ss_pred CEEEEEcccccc-------ccCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCcchhhHhccCeEEEEEEe
Confidence 699999877642 36899999999 67777899999999 9998766532110000 000
Q ss_pred ------------eecCCCCeEEEEeccCCCcc--cc--cccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc
Q 003987 355 ------------RVSGTEHTHILRVPFRSEKG--IL--RQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG 418 (781)
Q Consensus 355 ------------~v~~~~~~~I~rvp~~~~~~--~~--~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~ 418 (781)
......++.+++++...... .. ..+....+-......|...+...+.. +..+|||||+|.+.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~-~~~~pDviH~hd~~t 140 (476)
T cd03791 62 VPVGGRPEYVGVFELPVDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRR-LGWKPDIIHCHDWHT 140 (476)
T ss_pred eccCCceeEEEEEEEEeCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHh-cCCCCcEEEECchHH
Confidence 00112357777775433211 00 00000011111122344444444443 257999999999999
Q ss_pred hHHHHHHHHHc------CCcEEEEecCCcccCCCCChhhHhh--------hhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003987 419 NLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWKK--------FDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 419 ~lva~llar~~------gvp~v~t~H~l~~~k~~~s~~~~k~--------~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
++++.++++.. ++|+|+|+|++.............. ....+.+...+..+..++..||.|+++|..
T Consensus 141 ~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~ 220 (476)
T cd03791 141 GLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220 (476)
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHh
Confidence 88888888774 8999999999865442211111100 001112223445677889999999999987
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003987 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 485 ~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (781)
.++.+.+... +..+.++ +.....|+.+|+||+|.+.|.|..+......-.....+.....+...++++
T Consensus 221 ~~~~i~~~~~------~~gl~~~------~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 288 (476)
T cd03791 221 YAREILTPEF------GEGLDGL------LRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEEL 288 (476)
T ss_pred HHHHhCCCCC------CcchHHH------HHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHc
Confidence 7653322100 0001000 111257999999999999998764432110000000001111122234567
Q ss_pred CCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003987 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~ 644 (781)
|++.++++++|+++||+.+.||++.+++++.++.+. +++|+|+|+|.. ...+.++++++++ .++|.
T Consensus 289 g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~~~lvi~G~g~~----------~~~~~~~~~~~~~--~~~v~ 354 (476)
T cd03791 289 GLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDP----------EYEEALRELAARY--PGRVA 354 (476)
T ss_pred CCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--CcEEEEEecCCH----------HHHHHHHHHHHhC--CCcEE
Confidence 775457899999999999999999999999998764 499999999854 3456777777776 56788
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCC------eEEEECCCCH
Q 003987 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA------SGFHIDPYHP 718 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~------~G~lv~p~d~ 718 (781)
+++ ..+.+++..+++ .+|++++||.+|+||++++|||+||+|||+|+.||..|+|.++. +|+++++.|+
T Consensus 355 ~~~----~~~~~~~~~~~~-~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~ 429 (476)
T cd03791 355 VLI----GYDEALAHLIYA-GADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNA 429 (476)
T ss_pred EEE----eCCHHHHHHHHH-hCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCH
Confidence 766 344556677888 49999999999999999999999999999999999999999988 9999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
++++++|.++++ ...+++.|.++++++++ +.|||+.+ ++.|.+++
T Consensus 430 ~~l~~~i~~~l~-~~~~~~~~~~~~~~~~~---~~fsw~~~--a~~~~~~y 474 (476)
T cd03791 430 DALLAALRRALA-LYRDPEAWRKLQRNAMA---QDFSWDRS--AKEYLELY 474 (476)
T ss_pred HHHHHHHHHHHH-HHcCHHHHHHHHHHHhc---cCCChHHH--HHHHHHHH
Confidence 999999998863 33568899999888765 57999664 46666665
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=366.88 Aligned_cols=376 Identities=15% Similarity=0.189 Sum_probs=266.2
Q ss_pred CceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeee
Q 003987 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (781)
Q Consensus 277 ~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v 356 (781)
+.|||++++ +..| .+..||++.++. +|+++|.++||+|+ |+|...... +.
T Consensus 57 ~~mrI~~~~-~~~~-------~~~~gG~~~~~~--------~l~~~L~~~G~eV~----vlt~~~~~~---------~~- 106 (465)
T PLN02871 57 RPRRIALFV-EPSP-------FSYVSGYKNRFQ--------NFIRYLREMGDEVL----VVTTDEGVP---------QE- 106 (465)
T ss_pred CCceEEEEE-CCcC-------CcccccHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCC---------cc-
Confidence 357999997 3332 246799999999 77778899999999 998653211 00
Q ss_pred cCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEE
Q 003987 357 SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCT 435 (781)
Q Consensus 357 ~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~ 435 (781)
..++.+++++.... + +..... +.+ .+...+.+.+.+ .+|||||+|.+.. .+.+.++++..++|+|+
T Consensus 107 --~~g~~v~~~~~~~~-~----~~~~~~-~~~--~~~~~l~~~i~~---~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~ 173 (465)
T PLN02871 107 --FHGAKVIGSWSFPC-P----FYQKVP-LSL--ALSPRIISEVAR---FKPDLIHASSPGIMVFGALFYAKLLCVPLVM 173 (465)
T ss_pred --ccCceeeccCCcCC-c----cCCCce-eec--cCCHHHHHHHHh---CCCCEEEECCCchhHHHHHHHHHHhCCCEEE
Confidence 11344443322111 0 000000 000 011123333433 3899999998654 45566678889999999
Q ss_pred EecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCC
Q 003987 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (781)
Q Consensus 436 t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~ 515 (781)
+.|+............+ + ++.. +......++.+|.|+++|....+.+.+. |.
T Consensus 174 ~~h~~~~~~~~~~~~~~--~---~~~~--~~~~r~~~~~ad~ii~~S~~~~~~l~~~--------------------~~- 225 (465)
T PLN02871 174 SYHTHVPVYIPRYTFSW--L---VKPM--WDIIRFLHRAADLTLVTSPALGKELEAA--------------------GV- 225 (465)
T ss_pred EEecCchhhhhcccchh--h---HHHH--HHHHHHHHhhCCEEEECCHHHHHHHHHc--------------------CC-
Confidence 99976432211111001 0 0000 1123457789999999998775522111 11
Q ss_pred CCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHH
Q 003987 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (781)
Q Consensus 516 ~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~ 595 (781)
....++.+||||+|.+.|.|........ .++... .+++++|+|+||+.+.||++.++++++
T Consensus 226 ~~~~kv~vi~nGvd~~~f~p~~~~~~~~------------------~~~~~~-~~~~~~i~~vGrl~~~K~~~~li~a~~ 286 (465)
T PLN02871 226 TAANRIRVWNKGVDSESFHPRFRSEEMR------------------ARLSGG-EPEKPLIVYVGRLGAEKNLDFLKRVME 286 (465)
T ss_pred CCcCeEEEeCCccCccccCCccccHHHH------------------HHhcCC-CCCCeEEEEeCCCchhhhHHHHHHHHH
Confidence 1156899999999999887754322111 112111 346789999999999999999999998
Q ss_pred HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCC
Q 003987 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 675 (781)
Q Consensus 596 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 675 (781)
++ ++++|+|+|+|+. .+.+++++++ .+|.|+| .++.+++..+|+. +|++|+||..
T Consensus 287 ~~----~~~~l~ivG~G~~------------~~~l~~~~~~----~~V~f~G----~v~~~ev~~~~~~-aDv~V~pS~~ 341 (465)
T PLN02871 287 RL----PGARLAFVGDGPY------------REELEKMFAG----TPTVFTG----MLQGDELSQAYAS-GDVFVMPSES 341 (465)
T ss_pred hC----CCcEEEEEeCChH------------HHHHHHHhcc----CCeEEec----cCCHHHHHHHHHH-CCEEEECCcc
Confidence 76 4799999999865 4566666653 3699999 5667899999995 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCcccccccccc---CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Q 003987 676 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEH---GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (781)
Q Consensus 676 E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d---g~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~ 752 (781)
|+||++++|||+||+|||+|+.||..|++.+ +++|++++|+|+++++++|.+++ +|++.+++|++++++++ +
T Consensus 342 E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~-~ 416 (465)
T PLN02871 342 ETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL----ADPELRERMGAAAREEV-E 416 (465)
T ss_pred cccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-H
Confidence 9999999999999999999999999999999 99999999999999999998887 89999999999999988 6
Q ss_pred hcCcchh--hhcc-chHHHHHhc
Q 003987 753 RLVVSSD--GIVD-PSPFVINVI 772 (781)
Q Consensus 753 ~ysw~~~--~il~-~ye~ll~~~ 772 (781)
+|||+.+ .+.+ .|++++..+
T Consensus 417 ~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 417 KWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHH
Confidence 8999987 6666 688887643
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=356.86 Aligned_cols=280 Identities=16% Similarity=0.229 Sum_probs=226.1
Q ss_pred CCCceEEEEcCCCchHHHHHHHH--HcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecC
Q 003987 405 QGFPDFIIGNYSDGNLVASLLAY--KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (781)
Q Consensus 405 ~~kpDIIh~~~~~~~lva~llar--~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (781)
+.+||+||+|++..+..+..+++ ..+.+.++|+|+....... ....|+ ......++++|+|+++|
T Consensus 116 ~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~--------~~~~~~-----~~~~~~~~~ad~vv~~S 182 (406)
T PRK15427 116 PFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSRE--------VLNHYT-----PEYQQLFRRGDLMLPIS 182 (406)
T ss_pred cCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccch--------hhhhhh-----HHHHHHHHhCCEEEECC
Confidence 45899999999887777777766 3455778999975332110 001111 01224678999999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccc
Q 003987 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (781)
Q Consensus 483 ~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (781)
....+.+.+ .|++ ..|+.+||||+|.+.|.+....
T Consensus 183 ~~~~~~l~~--------------------~g~~--~~ki~vi~nGvd~~~f~~~~~~----------------------- 217 (406)
T PRK15427 183 DLWAGRLQK--------------------MGCP--PEKIAVSRMGVDMTRFSPRPVK----------------------- 217 (406)
T ss_pred HHHHHHHHH--------------------cCCC--HHHEEEcCCCCCHHHcCCCccc-----------------------
Confidence 876552211 1333 6789999999999887653210
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~ 642 (781)
...++..|+++||+.+.||++.+++|++++++..++++|+|+|+|+. .++++++++++++.++
T Consensus 218 -----~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~------------~~~l~~~~~~~~l~~~ 280 (406)
T PRK15427 218 -----APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW------------ERRLRTLIEQYQLEDV 280 (406)
T ss_pred -----cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 02345679999999999999999999999988788999999999976 6789999999999999
Q ss_pred EEEeccccCcCChHHHHHHHHccCcEEEEcCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCC
Q 003987 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 716 (781)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~------E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~ 716 (781)
|.|+| .++.+++..+++. +|+||+||.. ||||++++|||+||+|||+|+.||..|+|.++.+|++++++
T Consensus 281 V~~~G----~~~~~el~~~l~~-aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~ 355 (406)
T PRK15427 281 VEMPG----FKPSHEVKAMLDD-ADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEN 355 (406)
T ss_pred EEEeC----CCCHHHHHHHHHh-CCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCC
Confidence 99999 6678899999995 9999999974 99999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhccC-CHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 717 HPDQAAELMADFFGKCKE-NPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 717 d~~~lA~~I~~~l~~l~~-dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
|+++++++|.+++ + ||+.+++|+++|++++.++|+|+. +.+.+.+++.
T Consensus 356 d~~~la~ai~~l~----~~d~~~~~~~~~~ar~~v~~~f~~~~--~~~~l~~~~~ 404 (406)
T PRK15427 356 DAQALAQRLAAFS----QLDTDELAPVVKRAREKVETDFNQQV--INRELASLLQ 404 (406)
T ss_pred CHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHhcCHHH--HHHHHHHHHh
Confidence 9999999998887 7 999999999999999999999965 4455555553
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=346.48 Aligned_cols=365 Identities=19% Similarity=0.291 Sum_probs=264.9
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~ 358 (781)
|||++++. |..||.++++. +|++.|.++||+|+ |+|...+.... ..
T Consensus 1 mki~~~~~------------p~~gG~~~~~~--------~la~~L~~~G~~v~----v~~~~~~~~~~----------~~ 46 (371)
T cd04962 1 MKIGIVCY------------PTYGGSGVVAT--------ELGKALARRGHEVH----FITSSRPFRLD----------EY 46 (371)
T ss_pred CceeEEEE------------eCCCCccchHH--------HHHHHHHhcCCceE----EEecCCCcchh----------hh
Confidence 69999972 44699999999 77778899999999 99875332100 01
Q ss_pred CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH----cCCcEE
Q 003987 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK----MGITQC 434 (781)
Q Consensus 359 ~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~----~gvp~v 434 (781)
.++..+..++..... ......+.......+.+.+. ..+||+||+|++.+...+.+++++ .++|++
T Consensus 47 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~i~---~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i 115 (371)
T cd04962 47 SPNIFFHEVEVPQYP--------LFQYPPYDLALASKIAEVAK---RYKLDLLHVHYAVPHAVAAYLAREILGKKDLPVV 115 (371)
T ss_pred ccCeEEEEecccccc--------hhhcchhHHHHHHHHHHHHh---cCCccEEeecccCCccHHHHHHHHhcCcCCCcEE
Confidence 112333333322110 00111121222333344443 349999999987664444444432 279999
Q ss_pred EEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccC
Q 003987 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (781)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi 514 (781)
++.|+....... ....+. .....+++.+|.|+++|....+.+.+. +
T Consensus 116 ~~~h~~~~~~~~--------~~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~- 161 (371)
T cd04962 116 TTLHGTDITLVG--------QDPSFQ-----PATRFSIEKSDGVTAVSESLRQETYEL--------------------F- 161 (371)
T ss_pred EEEcCCcccccc--------ccccch-----HHHHHHHhhCCEEEEcCHHHHHHHHHh--------------------c-
Confidence 999975322110 011111 123457889999999998765422111 0
Q ss_pred CCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHH
Q 003987 515 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECY 594 (781)
Q Consensus 515 ~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~ 594 (781)
....++.+||||+|...|.+......+ ..++. .+++++++++||+.+.||++.+++++
T Consensus 162 -~~~~~i~vi~n~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~g~l~~~K~~~~li~a~ 219 (371)
T cd04962 162 -DITKEIEVIPNFVDEDRFRPKPDEALK-------------------RRLGA--PEGEKVLIHISNFRPVKRIDDVIRIF 219 (371)
T ss_pred -CCcCCEEEecCCcCHhhcCCCchHHHH-------------------HhcCC--CCCCeEEEEecccccccCHHHHHHHH
Confidence 125689999999998877654432211 22444 45778899999999999999999999
Q ss_pred HHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC
Q 003987 595 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (781)
Q Consensus 595 ~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 674 (781)
.++.+. .+++|+++|+|++ .+.++++++++++.++|.|+|.+ +++..+++. +|++|+||.
T Consensus 220 ~~l~~~-~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-~d~~v~ps~ 279 (371)
T cd04962 220 AKVRKE-VPARLLLVGDGPE------------RSPAERLARELGLQDDVLFLGKQ------DHVEELLSI-ADLFLLPSE 279 (371)
T ss_pred HHHHhc-CCceEEEEcCCcC------------HHHHHHHHHHcCCCceEEEecCc------ccHHHHHHh-cCEEEeCCC
Confidence 998765 4699999999976 56788889999999999999943 357888885 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003987 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 675 ~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~y 754 (781)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ .||+.+.+|++++++.+.++|
T Consensus 280 ~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~f 355 (371)
T cd04962 280 KESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLL----EDDELWQEFSRAARNRAAERF 355 (371)
T ss_pred cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999998877 899999999999999998999
Q ss_pred CcchhhhccchHHHHH
Q 003987 755 VVSSDGIVDPSPFVIN 770 (781)
Q Consensus 755 sw~~~~il~~ye~ll~ 770 (781)
||+. +++.|.+++.
T Consensus 356 s~~~--~~~~~~~~y~ 369 (371)
T cd04962 356 DSER--IVPQYEALYR 369 (371)
T ss_pred CHHH--HHHHHHHHHH
Confidence 9965 5566666654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=364.02 Aligned_cols=429 Identities=15% Similarity=0.161 Sum_probs=276.1
Q ss_pred ceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCc--ceee
Q 003987 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ--RLER 355 (781)
Q Consensus 278 ~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~--~~e~ 355 (781)
.|||++||.-..| .-.+||..-++- .|.++|+++||+|. |+++.+..-... ... ....
T Consensus 3 ~~~il~v~~E~~p-------~~k~ggl~dv~~--------~lp~~l~~~g~~v~----v~~P~y~~~~~~-~~~~~~~~~ 62 (485)
T PRK14099 3 PLRVLSVASEIFP-------LIKTGGLADVAG--------ALPAALKAHGVEVR----TLVPGYPAVLAG-IEDAEQVHS 62 (485)
T ss_pred CcEEEEEEecccc-------ccCCCcHHHHHH--------HHHHHHHHCCCcEE----EEeCCCcchhhh-hcCceEEEE
Confidence 4899999987765 357899887777 66777899999999 998876543111 110 1111
Q ss_pred ec---C---------CCCeEEEEeccCCCcccccccccccC-ch---------hhHHH---HHHHHHHHHHHH-cCCCce
Q 003987 356 VS---G---------TEHTHILRVPFRSEKGILRQWISRFD-VW---------PYLET---FTEDVGSEITAE-LQGFPD 409 (781)
Q Consensus 356 v~---~---------~~~~~I~rvp~~~~~~~~~~~isr~~-i~---------~yl~~---f~~~~~~~i~~~-~~~kpD 409 (781)
.. + .+++.++-+... .+..|.. ++ .-.++ |+..+...+... ...+||
T Consensus 63 ~~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pD 135 (485)
T PRK14099 63 FPDLFGGPARLLAARAGGLDLFVLDAP-------HLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPD 135 (485)
T ss_pred EeeeCCceEEEEEEEeCCceEEEEeCh-------HhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCC
Confidence 11 1 012333322111 1111111 11 11223 333232222221 145899
Q ss_pred EEEEcCCCchHHHHHHHHH--cCCcEEEEecCCcccCCCCChh------hHhhhh-ccccchhhhhHHHHHHhhCCEEEe
Q 003987 410 FIIGNYSDGNLVASLLAYK--MGITQCTIAHALEKTKYPDSDI------YWKKFD-EKYHFSCQFTADLIAMNNADFIIT 480 (781)
Q Consensus 410 IIh~~~~~~~lva~llar~--~gvp~v~t~H~l~~~k~~~s~~------~~k~~~-~~y~f~~~~~~e~~a~~~AD~IIt 480 (781)
|||+|.|.+++++.++... .++|.|+|+|++.......... .+..+. ....+.......+.++..||.|+|
T Consensus 136 IiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~vit 215 (485)
T PRK14099 136 IVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITT 215 (485)
T ss_pred EEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCeeee
Confidence 9999999999888777642 4689999999986543211111 011000 000111111234568899999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003987 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 481 ~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (781)
+|+..+..+.+.. ..+.+++.+ .....|+.+|+||+|.+.|.|.++.......-...++....+....
T Consensus 216 VS~~~a~ei~~~~------~g~gl~~~l------~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l 283 (485)
T PRK14099 216 VSPTYALEIQGPE------AGMGLDGLL------RQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAAL 283 (485)
T ss_pred cChhHHHHHhccc------CCcChHHHH------HhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHH
Confidence 9988765332210 001111111 1125689999999999999886542100000000000000011223
Q ss_pred ccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003987 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~ 640 (781)
++++|+..+++.++|+++||+.++||++.|++|+.++.+ .+++|+|+|+|+. ...+.+++++++++
T Consensus 284 ~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~~~~lvivG~G~~----------~~~~~l~~l~~~~~-- 349 (485)
T PRK14099 284 QARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--EGAQLALLGSGDA----------ELEARFRAAAQAYP-- 349 (485)
T ss_pred HHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHh--cCcEEEEEecCCH----------HHHHHHHHHHHHCC--
Confidence 456788545578899999999999999999999998865 3699999999854 34567788888764
Q ss_pred CcE-EEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------CeE
Q 003987 641 GQF-RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG---------ASG 710 (781)
Q Consensus 641 ~~V-~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg---------~~G 710 (781)
+++ .|+|+ .+++..+|..++|+||+||.+|+||++++|||+||+|+|+|++||+.|+|.++ .+|
T Consensus 350 ~~v~~~~G~------~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G 423 (485)
T PRK14099 350 GQIGVVIGY------DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATG 423 (485)
T ss_pred CCEEEEeCC------CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCce
Confidence 455 78884 45788877435999999999999999999999999999999999999999876 689
Q ss_pred EEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh--hhccchHHHH
Q 003987 711 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD--GIVDPSPFVI 769 (781)
Q Consensus 711 ~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~--~il~~ye~ll 769 (781)
++++|+|+++++++|.+++. +..|++.|++|+++++ .++|||+++ .+.+.|++++
T Consensus 424 ~l~~~~d~~~La~ai~~a~~-l~~d~~~~~~l~~~~~---~~~fSw~~~a~~y~~lY~~l~ 480 (485)
T PRK14099 424 VQFSPVTADALAAALRKTAA-LFADPVAWRRLQRNGM---TTDVSWRNPAQHYAALYRSLV 480 (485)
T ss_pred EEeCCCCHHHHHHHHHHHHH-HhcCHHHHHHHHHHhh---hhcCChHHHHHHHHHHHHHHH
Confidence 99999999999999987532 3379999999999986 378999876 4444455444
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=344.48 Aligned_cols=375 Identities=15% Similarity=0.174 Sum_probs=272.1
Q ss_pred CceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeee
Q 003987 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (781)
Q Consensus 277 ~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v 356 (781)
|+-||+++..--+|-+ ....||+++++. +++++|+. +|+ |+|...+.-.. .+
T Consensus 1 ~~~~~~~~~~~~~~~p-----~~~~g~ve~~~~--------~~~~~l~~---~~~----~~~~~~~~~~~------~~-- 52 (380)
T PRK15484 1 MIDKIIFTVTPIFSIP-----PRGAAAVETWIY--------QVAKRTSI---PNR----IACIKNPGYPE------YT-- 52 (380)
T ss_pred CCceEEEEeccCCCCC-----CccccHHHHHHH--------HhhhhccC---Cee----EEEecCCCCCc------hh--
Confidence 6778988877666643 234799999999 66667743 999 99988653110 00
Q ss_pred cCCCCeEEEEeccCCCcc-cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEE
Q 003987 357 SGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT 435 (781)
Q Consensus 357 ~~~~~~~I~rvp~~~~~~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~ 435 (781)
...+|+.|+++++....+ ...+|.+. ..+ .|...+...+......++||||+|... .+...+..+..+++++.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~vi~v~~~~-~~~~~~~~~~~~~~~v~ 126 (380)
T PRK15484 53 KVNDNCDIHYIGFSRIYKRLFQKWTRL-DPL----PYSQRILNIAHKFTITKDSVIVIHNSM-KLYRQIRERAPQAKLVM 126 (380)
T ss_pred hccCCCceEEEEeccccchhhhhhhcc-Cch----hHHHHHHHHHHhcCCCCCcEEEEeCcH-HhHHHHHhhCCCCCEEE
Confidence 112357788887754321 12233322 222 233334444433323579999999754 34444555556789999
Q ss_pred EecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCC
Q 003987 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (781)
Q Consensus 436 t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~ 515 (781)
+.|..... ..++.++.||++|....+...+ +.
T Consensus 127 ~~h~~~~~--------------------------~~~~~~~~ii~~S~~~~~~~~~---------------------~~- 158 (380)
T PRK15484 127 HMHNAFEP--------------------------ELLDKNAKIIVPSQFLKKFYEE---------------------RL- 158 (380)
T ss_pred EEecccCh--------------------------hHhccCCEEEEcCHHHHHHHHh---------------------hC-
Confidence 99953210 1234678999999876542110 11
Q ss_pred CCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHH
Q 003987 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (781)
Q Consensus 516 ~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~ 595 (781)
...++.+||||+|.+.|.+......+ +++|+ ++++++|+|+||+.+.||++.|++|++
T Consensus 159 -~~~~i~vIpngvd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~il~~Grl~~~Kg~~~Li~A~~ 216 (380)
T PRK15484 159 -PNADISIVPNGFCLETYQSNPQPNLR-------------------QQLNI--SPDETVLLYAGRISPDKGILLLMQAFE 216 (380)
T ss_pred -CCCCEEEecCCCCHHHcCCcchHHHH-------------------HHhCC--CCCCeEEEEeccCccccCHHHHHHHHH
Confidence 15689999999999888764432211 23555 456788999999999999999999999
Q ss_pred HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCC
Q 003987 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 675 (781)
Q Consensus 596 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 675 (781)
++.+..|+++|+|+|+++.. .+.+...+.+.+++++++++ .+|.|+| .++.+++..+|+. +|++|+||.+
T Consensus 217 ~l~~~~p~~~lvivG~g~~~---~~~~~~~~~~~l~~~~~~l~--~~v~~~G----~~~~~~l~~~~~~-aDv~v~pS~~ 286 (380)
T PRK15484 217 KLATAHSNLKLVVVGDPTAS---SKGEKAAYQKKVLEAAKRIG--DRCIMLG----GQPPEKMHNYYPL-ADLVVVPSQV 286 (380)
T ss_pred HHHHhCCCeEEEEEeCCccc---cccchhHHHHHHHHHHHhcC--CcEEEeC----CCCHHHHHHHHHh-CCEEEeCCCC
Confidence 99888899999999998652 11123345667777887775 5799999 6677899999995 9999999974
Q ss_pred -CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEE-EECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Q 003987 676 -EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGF-HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753 (781)
Q Consensus 676 -E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~-lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ 753 (781)
|+||++++|||+||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.+++ +|++. .+++++|++.+.++
T Consensus 287 ~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll----~d~~~-~~~~~~ar~~~~~~ 361 (380)
T PRK15484 287 EEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL----ADPEL-TQIAEQAKDFVFSK 361 (380)
T ss_pred ccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH----cCHHH-HHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999 568999999999998887 78875 78999999999999
Q ss_pred cCcchhhhccchHHHHHhc
Q 003987 754 LVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 754 ysw~~~~il~~ye~ll~~~ 772 (781)
|||+. +++.|++++..+
T Consensus 362 fsw~~--~a~~~~~~l~~~ 378 (380)
T PRK15484 362 YSWEG--VTQRFEEQIHNW 378 (380)
T ss_pred CCHHH--HHHHHHHHHHHh
Confidence 99965 556777777543
|
|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=342.11 Aligned_cols=382 Identities=19% Similarity=0.247 Sum_probs=260.3
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~ 358 (781)
|||+++.|... .||.++++. +|+++|+++||+|+ |+|...+... +. .+...+
T Consensus 1 mkIl~~~~~~~-----------~gG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~---~~--~~~~~~ 52 (392)
T cd03805 1 LRVAFIHPDLG-----------IGGAERLVV--------DAALALQSRGHEVT----IYTSHHDPSH---CF--EETKDG 52 (392)
T ss_pred CeEEEECCCCC-----------CchHHHHHH--------HHHHHHHhCCCeEE----EEcCCCCchh---cc--hhccCC
Confidence 79999986543 589999999 77777899999999 9986532110 00 011111
Q ss_pred CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHH--HHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEE
Q 003987 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEIT--AELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 436 (781)
Q Consensus 359 ~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~--~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t 436 (781)
++.+...+.....++ .++ ...+..+.......+. .....++|+||+|....+..+ +....+.|++++
T Consensus 53 --~~~i~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~--~~~~~~~~~i~~ 121 (392)
T cd03805 53 --TLPVRVRGDWLPRSI----FGR---FHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPL--LKLFSPSKILFY 121 (392)
T ss_pred --eeEEEEEeEEEcchh----hHh---HHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHH--HHHhcCCcEEEE
Confidence 122222211100000 000 0011111111111111 112458999999875543322 233334899999
Q ss_pred ecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003987 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (781)
Q Consensus 437 ~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~ 516 (781)
.|.............. ..|+... ...+..+++.+|.|+++|....+...+.. ....
T Consensus 122 ~h~~~~~~~~~~~~~~----~~~~~~~-~~~e~~~~~~ad~ii~~s~~~~~~~~~~~------------------~~~~- 177 (392)
T cd03805 122 CHFPDQLLAQRGSLLK----RLYRKPF-DWLEEFTTGMADKIVVNSNFTASVFKKTF------------------PSLA- 177 (392)
T ss_pred EecChHHhcCCCcHHH----HHHHHHH-HHHHHHHhhCceEEEEcChhHHHHHHHHh------------------cccc-
Confidence 9943211100011111 1111111 12466789999999999987654221110 0111
Q ss_pred CCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHH
Q 003987 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (781)
Q Consensus 517 f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~ 596 (781)
..++.+|+||+|.+.|.+......+ +..+. .+++++|+++||+.+.||++.+++|+++
T Consensus 178 -~~~~~vi~n~vd~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~grl~~~Kg~~~ll~a~~~ 235 (392)
T cd03805 178 -KNPREVVYPCVDTDSFESTSEDPDP-------------------GLLIP--KSGKKTFLSINRFERKKNIALAIEAFAI 235 (392)
T ss_pred -cCCcceeCCCcCHHHcCcccccccc-------------------ccccc--CCCceEEEEEeeecccCChHHHHHHHHH
Confidence 2344699999999877664322100 11222 4567899999999999999999999999
Q ss_pred hhccC---CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH-cCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEc
Q 003987 597 NSQLR---ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 672 (781)
Q Consensus 597 l~~~~---~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~e-lgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~P 672 (781)
+.+.. ++++|+++|+++. ...++.++.+++++++++ +++.++|.|+| .++.+++..+++. +|++++|
T Consensus 236 l~~~~~~~~~~~l~i~G~~~~----~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g----~~~~~~~~~~l~~-ad~~l~~ 306 (392)
T cd03805 236 LKDKLAEFKNVRLVIAGGYDP----RVAENVEYLEELQRLAEELLLLEDQVIFLP----SISDSQKELLLSS-ARALLYT 306 (392)
T ss_pred HHhhcccccCeEEEEEcCCCC----CCchhHHHHHHHHHHHHHhcCCCceEEEeC----CCChHHHHHHHhh-CeEEEEC
Confidence 98776 7999999999865 122344567889999999 99999999999 6777899999995 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Q 003987 673 AFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (781)
Q Consensus 673 S~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~ 752 (781)
|..|+||++++|||+||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++ .+++.+++++++|++++.+
T Consensus 307 s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~----~~~~~~~~~~~~a~~~~~~ 381 (392)
T cd03805 307 PSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLA----NDPDLADRMGAAGRKRVKE 381 (392)
T ss_pred CCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999986 9999999998887 8999999999999999999
Q ss_pred hcCcchh
Q 003987 753 RLVVSSD 759 (781)
Q Consensus 753 ~ysw~~~ 759 (781)
+|||+.+
T Consensus 382 ~~s~~~~ 388 (392)
T cd03805 382 KFSTEAF 388 (392)
T ss_pred hcCHHHH
Confidence 9999765
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-37 Score=341.83 Aligned_cols=359 Identities=14% Similarity=0.182 Sum_probs=242.9
Q ss_pred HHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHH----
Q 003987 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFT---- 393 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~---- 393 (781)
+|+++|+++||+|+ ++|....... .+ ++++++++...... ...++|...+.
T Consensus 15 ~la~~L~~~G~~v~----~~~~~~~~~~-----------~~--~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 69 (396)
T cd03818 15 HLAPALAAQGHEVV----FLTEPNAAPP-----------PG--GVRVVRYRPPRGPT--------SGTHPYLREFEEAVL 69 (396)
T ss_pred HHHHHHHHCCCEEE----EEecCCCCCC-----------CC--CeeEEEecCCCCCC--------CCCCccchhHHHHHH
Confidence 67888999999999 9987743211 11 57888887553311 02222322221
Q ss_pred --HHHHHHHHH--HcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCcccCCCCC----hhhHhhhhccccchhh
Q 003987 394 --EDVGSEITA--ELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDS----DIYWKKFDEKYHFSCQ 464 (781)
Q Consensus 394 --~~~~~~i~~--~~~~kpDIIh~~~~~~~lva~llar~-~gvp~v~t~H~l~~~k~~~s----~~~~k~~~~~y~f~~~ 464 (781)
..+.+.+.. ..+.+|||||+|...+. +..+++. .++|+|...|-+......+. ....+.. ...+....
T Consensus 70 ~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~--~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 146 (396)
T cd03818 70 RGQAVARALLALRAKGFRPDVIVAHPGWGE--TLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLD-DALRLRNR 146 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEECCccch--hhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchh-HHHHHHHh
Confidence 112222222 12458999999976542 2334444 46888876653222111000 0000000 00111111
Q ss_pred hhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHh
Q 003987 465 FTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLT 544 (781)
Q Consensus 465 ~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~ 544 (781)
.......++.||.+|++|....+... ..+..|+.|||||+|.+.|.|.........
T Consensus 147 ~~~~~~~~~~ad~vi~~s~~~~~~~~------------------------~~~~~ki~vI~ngvd~~~f~~~~~~~~~~~ 202 (396)
T cd03818 147 NALILLALAQADAGVSPTRWQRSTFP------------------------AELRSRISVIHDGIDTDRLRPDPQARLRLP 202 (396)
T ss_pred hhHhHHHHHhCCEEECCCHHHHhhCc------------------------HhhccceEEeCCCccccccCCCchhhhccc
Confidence 11234678999999999987755211 111468999999999999887653322110
Q ss_pred hhhcchhhhccCccccccccCCCCCCCCCEEEEEee-ccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHH
Q 003987 545 ALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 545 ~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee 623 (781)
...++ .+++++|+|+|| +.+.||++.+++|++++.+..++++|+|+|++... .....+.
T Consensus 203 -----------------~~~~~--~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~-~g~~~~~ 262 (396)
T cd03818 203 -----------------NGRVL--TPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVS-YGAPPPD 262 (396)
T ss_pred -----------------ccccC--CCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcc-cCCCCCC
Confidence 11122 456789999998 99999999999999999888899999999985320 0000000
Q ss_pred HHHHHHHHHHHHHcC---CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003987 624 IAEIEKMHELMKTYK---LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 700 (781)
Q Consensus 624 ~~~~~~l~~li~elg---L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~ 700 (781)
.+ ....+++++++ ..++|.|+| .++.+++..+|+. +|++|+||..|++|++++||||||+|||+|+.||.
T Consensus 263 ~~--~~~~~~~~~~~~~~~~~~V~f~G----~v~~~~~~~~l~~-adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~ 335 (396)
T cd03818 263 GE--SWKQHMLDELGGRLDLSRVHFLG----RVPYDQYLALLQV-SDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPV 335 (396)
T ss_pred cc--cHHHHHHHHhhcccCcceEEEeC----CCCHHHHHHHHHh-CcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCc
Confidence 00 01122233333 247899999 6778899999995 99999999999999999999999999999999999
Q ss_pred ccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 701 AEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 701 ~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
.|+|.++.+|++++++|+++++++|.+++ +|++.+++|+++|++++.++|||+.+
T Consensus 336 ~e~i~~~~~G~lv~~~d~~~la~~i~~ll----~~~~~~~~l~~~ar~~~~~~fs~~~~ 390 (396)
T cd03818 336 REVITDGENGLLVDFFDPDALAAAVIELL----DDPARRARLRRAARRTALRYDLLSVC 390 (396)
T ss_pred hhhcccCCceEEcCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhccHHHH
Confidence 99999999999999999999999998887 89999999999999999999999754
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-37 Score=337.70 Aligned_cols=364 Identities=15% Similarity=0.189 Sum_probs=259.8
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+.+..+. ..||.+.++. +|++.|.+.|+++. |++....+ ........
T Consensus 3 ~il~ii~~~-----------~~GG~e~~~~--------~l~~~l~~~~~~~~----v~~~~~~~--------~~~~~~~~ 51 (374)
T TIGR03088 3 LIVHVVYRF-----------DVGGLENGLV--------NLINHLPADRYRHA----VVALTEVS--------AFRKRIQR 51 (374)
T ss_pred eEEEEeCCC-----------CCCcHHHHHH--------HHHhhccccccceE----EEEcCCCC--------hhHHHHHh
Confidence 678777543 3699999999 77777888999988 77643211 11110111
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE-EEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ-CTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~-v~t~H 438 (781)
.++.+++++.... ..+ .+...+.+.+.+. +|||||+|...+ ..+.++++..++|. +.+.|
T Consensus 52 ~~i~~~~~~~~~~-----------~~~----~~~~~l~~~l~~~---~~Divh~~~~~~-~~~~~~~~~~~~~~~i~~~h 112 (374)
T TIGR03088 52 PDVAFYALHKQPG-----------KDV----AVYPQLYRLLRQL---RPDIVHTRNLAA-LEAQLPAALAGVPARIHGEH 112 (374)
T ss_pred cCceEEEeCCCCC-----------CCh----HHHHHHHHHHHHh---CCCEEEEcchhH-HHHHHHHHhcCCCeEEEeec
Confidence 2567777654321 011 1122344445444 899999997544 34455666778775 44555
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
+....... ...| .|.+. .......+|.+|++|....+...+. .|++ .
T Consensus 113 ~~~~~~~~--~~~~-----~~~~~-----~~~~~~~~~~~i~vs~~~~~~~~~~-------------------~~~~--~ 159 (374)
T TIGR03088 113 GRDVFDLD--GSNW-----KYRWL-----RRLYRPLIHHYVAVSRDLEDWLRGP-------------------VKVP--P 159 (374)
T ss_pred Ccccccch--hhHH-----HHHHH-----HHHHHhcCCeEEEeCHHHHHHHHHh-------------------cCCC--h
Confidence 43211110 0011 12211 2234556899999998765522111 1222 5
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+|+||+|.+.|.+.......... . ... ..++++|+++||+.+.||++.+++|+.++.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~~~~~~~~----------------~-~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~ 220 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRGDRSPILP----------------P-DFF--ADESVVVGTVGRLQAVKDQPTLVRAFALLV 220 (374)
T ss_pred hhEEEeccCccccccCCCccchhhhhH----------------h-hcC--CCCCeEEEEEecCCcccCHHHHHHHHHHHH
Confidence 789999999999888765322111100 0 111 356789999999999999999999999987
Q ss_pred ccCC----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC
Q 003987 599 QLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (781)
Q Consensus 599 ~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 674 (781)
+..+ +++|+++|+|+. .+.++++++++++.++|.|+|.+ .++..+++. +|++|+||.
T Consensus 221 ~~~~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~pS~ 281 (374)
T TIGR03088 221 RQLPEGAERLRLVIVGDGPA------------RGACEQMVRAAGLAHLVWLPGER------DDVPALMQA-LDLFVLPSL 281 (374)
T ss_pred HhCcccccceEEEEecCCch------------HHHHHHHHHHcCCcceEEEcCCc------CCHHHHHHh-cCEEEeccc
Confidence 6544 689999999876 56788999999999999999943 367888885 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003987 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 675 ~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~y 754 (781)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ .|++.+++++++|++++.++|
T Consensus 282 ~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~a~~~~~~~f 357 (374)
T TIGR03088 282 AEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYV----SDPAARRAHGAAGRARAEQQF 357 (374)
T ss_pred cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999998887 799999999999999999999
Q ss_pred CcchhhhccchHHHHH
Q 003987 755 VVSSDGIVDPSPFVIN 770 (781)
Q Consensus 755 sw~~~~il~~ye~ll~ 770 (781)
||+.+ ++.|++++.
T Consensus 358 s~~~~--~~~~~~~y~ 371 (374)
T TIGR03088 358 SINAM--VAAYAGLYD 371 (374)
T ss_pred CHHHH--HHHHHHHHH
Confidence 99764 455666654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=327.07 Aligned_cols=347 Identities=19% Similarity=0.214 Sum_probs=260.8
Q ss_pred CcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCccccccc
Q 003987 300 DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQW 379 (781)
Q Consensus 300 ~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~ 379 (781)
..||.++++. +|+++|+++||+|. |++...+. .... ...+++++++++...+
T Consensus 8 ~~gG~e~~~~--------~l~~~L~~~g~~v~----v~~~~~~~------~~~~----~~~~~~~~~~~~~~~~------ 59 (355)
T cd03819 8 ESGGVERGTL--------ELARALVERGHRSL----VASAGGRL------VAEL----EAEGSRHIKLPFISKN------ 59 (355)
T ss_pred ccCcHHHHHH--------HHHHHHHHcCCEEE----EEcCCCch------HHHH----HhcCCeEEEccccccc------
Confidence 3599999999 77778899999998 88754211 1111 1124566666654421
Q ss_pred ccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccc
Q 003987 380 ISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKY 459 (781)
Q Consensus 380 isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y 459 (781)
.+..+ .+...+.+.+.. .+||+||+|+....+.+.++++..++|++++.|+...... .
T Consensus 60 -----~~~~~-~~~~~l~~~~~~---~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~------------~- 117 (355)
T cd03819 60 -----PLRIL-LNVARLRRLIRE---EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF------------R- 117 (355)
T ss_pred -----hhhhH-HHHHHHHHHHHH---cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH------------H-
Confidence 11111 112233334433 4899999999887788888888899999999997643210 1
Q ss_pred cchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHH
Q 003987 460 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK 539 (781)
Q Consensus 460 ~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~ 539 (781)
....+..+|.++++|....+..++ ..|++ ..++.+||||+|...|.+....
T Consensus 118 --------~~~~~~~~~~vi~~s~~~~~~~~~-------------------~~~~~--~~k~~~i~ngi~~~~~~~~~~~ 168 (355)
T cd03819 118 --------YNAIMARGDRVIAVSNFIADHIRE-------------------NYGVD--PDRIRVIPRGVDLDRFDPGAVP 168 (355)
T ss_pred --------HHHHHHhcCEEEEeCHHHHHHHHH-------------------hcCCC--hhhEEEecCCccccccCccccc
Confidence 113467899999999876552211 11332 6799999999999887654322
Q ss_pred HHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCc
Q 003987 540 QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSK 619 (781)
Q Consensus 540 ~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~ 619 (781)
...... .+++++. ++++++++++||+.+.||++.+++++.++++..++++|+|+|+++..
T Consensus 169 ~~~~~~--------------~~~~~~~--~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~---- 228 (355)
T cd03819 169 PERILA--------------LAREWPL--PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGR---- 228 (355)
T ss_pred hHHHHH--------------HHHHcCC--CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCccc----
Confidence 111100 0122343 45678999999999999999999999999887789999999998651
Q ss_pred chHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC-CCCCCcHHHHHHHHcCCcEEEcCcc
Q 003987 620 DREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHG 698 (781)
Q Consensus 620 d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVVaT~~g 698 (781)
....+.+.+.++++++.++|.|+|+ .+++..+++. +|++++|| ..|+||++++|||+||+|||+|+.|
T Consensus 229 ----~~~~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~l~~-ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~ 297 (355)
T cd03819 229 ----RFYYAELLELIKRLGLQDRVTFVGH------CSDMPAAYAL-ADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG 297 (355)
T ss_pred ----chHHHHHHHHHHHcCCcceEEEcCC------cccHHHHHHh-CCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC
Confidence 1334556678888999899999995 3478899995 99999999 8999999999999999999999999
Q ss_pred ccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 699 GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 699 G~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
|..|++.++.+|++++++|+++++++|..++. .+++.+++++++|++.+.++|||+.|
T Consensus 298 ~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~---~~~~~~~~~~~~a~~~~~~~f~~~~~ 355 (355)
T cd03819 298 GARETVRPGETGLLVPPGDAEALAQALDQILS---LLPEGRAKMFAKARMCVETLFSYDRM 355 (355)
T ss_pred CcHHHHhCCCceEEeCCCCHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHHHhhhhccC
Confidence 99999999999999999999999999975552 68999999999999999999999864
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-36 Score=351.93 Aligned_cols=457 Identities=13% Similarity=0.176 Sum_probs=289.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCchhH-------HHHhhhcCCccccCCcHHHHHHHHHHHHHhhcCCCcccHhhhhcCC
Q 003987 203 ISRLQSSLSKAEDHLSKLPPDTPFSQF-------EYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRL 275 (781)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~r~ 275 (781)
.+.=..++++|.+..+.=. .-|.+. -.-+|.+|=|.---++--|+.-|-+++...-+-- +...+. -+
T Consensus 204 ~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~ 277 (694)
T PRK15179 204 LWRARDVLQAGLDAIGDGA--RKLTRRLVDLNADLAALRRLGVEGDGRDVPVSILVLEKMLQEIGRRR-NAEYDA---GP 277 (694)
T ss_pred HHHHHHHHHHHHHhhCcch--HHHHHHHHHHHHHHHHHHHcCcccccCCCceeeeeHHHHHHHHhhcC-cccccC---CC
Confidence 4445556666665554333 122222 2246777777655566677777777666544211 110110 01
Q ss_pred CCce-eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCC------------ceeecceEEEccCC
Q 003987 276 PMVF-NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGL------------DISPKILIVTRLIP 342 (781)
Q Consensus 276 p~~m-rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~Gh------------eV~~~v~VvT~~~p 342 (781)
.... ||+++.+.. ..||.+.+++ .|+.+|.++|. ++. |++....
T Consensus 278 ~~~~~rIl~vi~sl-----------~~GGAEr~~~--------~La~~l~~~~~~~~~~~g~g~~~~~~----V~~~~~~ 334 (694)
T PRK15179 278 ESFVGPVLMINGSL-----------GAGGAERQFV--------NTAVALQSAIQQGQSIAGYGVLGPVQ----VVCRSLR 334 (694)
T ss_pred CCCcceEEEEeCCC-----------CCCcHHHHHH--------HHHHHHHhcccCcccccCccCCCCcE----EEEEecc
Confidence 1234 899887544 3699999999 55666677744 233 3332111
Q ss_pred CCCCC-ccCcceeeecCCCCeEEEEeccCCCccccc--ccccccC----chh-hHHHHHHHHHHHHHHHcCCCceEEEEc
Q 003987 343 DAKGT-TCNQRLERVSGTEHTHILRVPFRSEKGILR--QWISRFD----VWP-YLETFTEDVGSEITAELQGFPDFIIGN 414 (781)
Q Consensus 343 ~~~~~-~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~--~~isr~~----i~~-yl~~f~~~~~~~i~~~~~~kpDIIh~~ 414 (781)
...+. .+...+. ..++.+..++.....+... .+..... ..| ........+.+.+++ .+|||||+|
T Consensus 335 ~~~g~~~~~~~L~----~~Gv~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~---~kpDIVH~h 407 (694)
T PRK15179 335 SREGADFFAATLA----DAGIPVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRS---SVPSVVHIW 407 (694)
T ss_pred cccCcchHHHHHH----hCCCeEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHH---cCCcEEEEe
Confidence 11111 1111111 1246666665443211000 0000000 001 111223344444444 389999999
Q ss_pred CCCchHHHHHHHHHcCCcEEE-EecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccc
Q 003987 415 YSDGNLVASLLAYKMGITQCT-IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTV 493 (781)
Q Consensus 415 ~~~~~lva~llar~~gvp~v~-t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v 493 (781)
.+.+++++.++++..++|+|+ +.|++...... . .++ ..|.... ..+....++.+|++|......+.+
T Consensus 408 ~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~--~-~~~---~~~~~l~----~~l~~~~~~i~Vs~S~~~~~~l~~-- 475 (694)
T PRK15179 408 QDGSIFACALAALLAGVPRIVLSVRTMPPVDRP--D-RYR---VEYDIIY----SELLKMRGVALSSNSQFAAHRYAD-- 475 (694)
T ss_pred CCcHHHHHHHHHHHcCCCEEEEEeCCCccccch--h-HHH---HHHHHHH----HHHHhcCCeEEEeCcHHHHHHHHH--
Confidence 999999999999999999876 55764322111 1 111 1111111 111222345566666654331111
Q ss_pred cccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCC
Q 003987 494 GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKP 573 (781)
Q Consensus 494 ~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~ 573 (781)
..|++ ..|+.|||||+|.+.|.+.+........ +....+.+.+
T Consensus 476 -----------------~~g~~--~~kI~VI~NGVd~~~f~~~~~~~~~~~~------------------~~~~~~~~~~ 518 (694)
T PRK15179 476 -----------------WLGVD--ERRIPVVYNGLAPLKSVQDDACTAMMAQ------------------FDARTSDARF 518 (694)
T ss_pred -----------------HcCCC--hhHEEEECCCcCHHhcCCCchhhHHHHh------------------hccccCCCCe
Confidence 11333 6799999999998877654322211100 1111134567
Q ss_pred EEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcC
Q 003987 574 IVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRA 653 (781)
Q Consensus 574 iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v 653 (781)
+|+++||+.+.||++.+++|++++.+..|+++|+|+|+|+. .++++++++++++.++|+|+|++.
T Consensus 519 vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~------------~~~L~~l~~~lgL~~~V~flG~~~--- 583 (694)
T PRK15179 519 TVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPL------------LESVREFAQRLGMGERILFTGLSR--- 583 (694)
T ss_pred EEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcc------------hHHHHHHHHHcCCCCcEEEcCCcc---
Confidence 89999999999999999999999988889999999999976 678999999999999999999643
Q ss_pred ChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH--HHHHHHHHHHHHh
Q 003987 654 RNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP--DQAAELMADFFGK 731 (781)
Q Consensus 654 ~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~--~~lA~~I~~~l~~ 731 (781)
++..+|+ .+|+||+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|++++++|. ++++++|.+++..
T Consensus 584 ---dv~~ll~-aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~ 659 (694)
T PRK15179 584 ---RVGYWLT-QFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDM 659 (694)
T ss_pred ---hHHHHHH-hcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhC
Confidence 5778888 499999999999999999999999999999999999999999999999998874 6899999888854
Q ss_pred ccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 732 CKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 732 l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
+..+ ..+++++++++.++|||+. +++.|.+++
T Consensus 660 l~~~----~~l~~~ar~~a~~~FS~~~--~~~~~~~lY 691 (694)
T PRK15179 660 CAAD----PGIARKAADWASARFSLNQ--MIASTVRCY 691 (694)
T ss_pred hhcc----HHHHHHHHHHHHHhCCHHH--HHHHHHHHh
Confidence 4444 4567889999999999966 556666665
|
|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-36 Score=329.64 Aligned_cols=274 Identities=19% Similarity=0.290 Sum_probs=224.3
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHH
Q 003987 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 406 ~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
.+||+||+|....++.+..++++.|+|++++.|+.......... ... .+.+ ........++.+|.|+++|...
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~----~~~-~~~~--~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALL----LRS-RWAL--YARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhh----ccc-chhH--HHHHHHHHHHhcCEEEECCHHH
Confidence 48999999987777888888999999999999975432211100 000 0111 1123445788999999999877
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccC
Q 003987 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (781)
Q Consensus 486 ~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g 565 (781)
.+.+.+ .|++ ..++.++|||+|.+.|.+...
T Consensus 154 ~~~~~~--------------------~~~~--~~~i~vi~~g~d~~~~~~~~~--------------------------- 184 (367)
T cd05844 154 RDRLLA--------------------LGFP--PEKVHVHPIGVDTAKFTPATP--------------------------- 184 (367)
T ss_pred HHHHHH--------------------cCCC--HHHeEEecCCCCHHhcCCCCC---------------------------
Confidence 552111 1332 668999999999877654311
Q ss_pred CCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003987 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (781)
Q Consensus 566 ~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~f 645 (781)
..+++.++++|++.+.||++.+++|++.+.+..++++|+|+|+|+. .+.++++++++++.++|+|
T Consensus 185 ---~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~ 249 (367)
T cd05844 185 ---ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL------------LAALEALARALGLGGRVTF 249 (367)
T ss_pred ---CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH------------HHHHHHHHHHcCCCCeEEE
Confidence 2356789999999999999999999999988788999999999865 5678889999999999999
Q ss_pred eccccCcCChHHHHHHHHccCcEEEEcCC------CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHH
Q 003987 646 IAAQTNRARNGELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 719 (781)
Q Consensus 646 lG~~~~~v~~~el~~~la~aadvfV~PS~------~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~ 719 (781)
+| .++.+++..+++. +|++|+||. .|+||++++|||+||+|||+|+.||..|++.++.+|+++++.|++
T Consensus 250 ~g----~~~~~~l~~~~~~-ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d~~ 324 (367)
T cd05844 250 LG----AQPHAEVRELMRR-ARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGDVA 324 (367)
T ss_pred CC----CCCHHHHHHHHHh-CCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCCHH
Confidence 99 6778899999995 999999997 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
+++++|.+++ +|++.++++++++++++.++|||+..
T Consensus 325 ~l~~~i~~l~----~~~~~~~~~~~~a~~~~~~~~s~~~~ 360 (367)
T cd05844 325 ALAAALGRLL----ADPDLRARMGAAGRRRVEERFDLRRQ 360 (367)
T ss_pred HHHHHHHHHH----cCHHHHHHHHHHHHHHHHHHCCHHHH
Confidence 9999998887 89999999999999999999999764
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=321.95 Aligned_cols=360 Identities=16% Similarity=0.180 Sum_probs=252.0
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+|++.+++| |..||++.++. +|+++|.++||+|+ |+|........ ....
T Consensus 1 ~i~~i~~~~~~--------~~~gG~~~~~~--------~la~~L~~~g~~v~----v~~~~~~~~~~---------~~~~ 51 (363)
T cd04955 1 KIAIIGTRGIP--------AKYGGFETFVE--------ELAPRLVARGHEVT----VYCRSPYPKQK---------ETEY 51 (363)
T ss_pred CeEEEecCcCC--------cccCcHHHHHH--------HHHHHHHhcCCCEE----EEEccCCCCCc---------cccc
Confidence 79999999886 56799999999 77778899999999 99876432110 1112
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~ 439 (781)
.+++++++|.....+ ...+.+ .+ ..+...+. ...++|+||...+.. ..+..++++.++|++++.|+
T Consensus 52 ~~i~~~~~~~~~~~~--------~~~~~~--~~-~~~~~~~~--~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~v~~~h~ 117 (363)
T cd04955 52 NGVRLIHIPAPEIGG--------LGTIIY--DI-LAILHALF--VKRDIDHVHALGPAI-APFLPLLRLKGKKVVVNMDG 117 (363)
T ss_pred CCceEEEcCCCCccc--------hhhhHH--HH-HHHHHHHh--ccCCeEEEEecCccH-HHHHHHHHhcCCCEEEEccC
Confidence 367888877654211 000000 00 11111111 133566666555444 34444556679999999998
Q ss_pred CcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003987 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 440 l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~ 519 (781)
...... .|..... .+ ....+..+++.+|.||++|....+..+.. .|. +
T Consensus 118 ~~~~~~-----~~~~~~~--~~--~~~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~----~ 165 (363)
T cd04955 118 LEWKRA-----KWGRPAK--RY--LKFGEKLAVKFADRLIADSPGIKEYLKEK-------------------YGR----D 165 (363)
T ss_pred cceeec-----ccccchh--HH--HHHHHHHHHhhccEEEeCCHHHHHHHHHh-------------------cCC----C
Confidence 644321 1111100 00 11234567889999999998776522111 121 2
Q ss_pred ceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc
Q 003987 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (781)
+ .+||||+|...+.+.... . ..++. ++++.++++||+.+.||++.+++|++++..
T Consensus 166 ~-~~i~ngv~~~~~~~~~~~---~------------------~~~~~---~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~ 220 (363)
T cd04955 166 S-TYIPYGADHVVSSEEDEI---L------------------KKYGL---EPGRYYLLVGRIVPENNIDDLIEAFSKSNS 220 (363)
T ss_pred C-eeeCCCcChhhcchhhhh---H------------------HhcCC---CCCcEEEEEecccccCCHHHHHHHHHhhcc
Confidence 2 899999998766541111 0 11332 234568899999999999999999998864
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH-HcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCC-CC
Q 003987 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY-EA 677 (781)
Q Consensus 600 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~-elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~-E~ 677 (781)
+++|+++|+++. ...+.+.++ ++++.++|+|+| .++.+++..+++. +|++++||.. |+
T Consensus 221 ---~~~l~ivG~~~~------------~~~~~~~~~~~~~~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~~~e~ 280 (363)
T cd04955 221 ---GKKLVIVGNADH------------NTPYGKLLKEKAAADPRIIFVG----PIYDQELLELLRY-AALFYLHGHSVGG 280 (363)
T ss_pred ---CceEEEEcCCCC------------cchHHHHHHHHhCCCCcEEEcc----ccChHHHHHHHHh-CCEEEeCCccCCC
Confidence 799999999865 122333333 677889999999 6677899999995 9999999998 99
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003987 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 678 fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~ 757 (781)
||++++|||+||+|||+|+.|+..|++.+ +|++++++|. ++++|..++ +|++.+.++++++++.+.++|||+
T Consensus 281 ~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~fs~~ 352 (363)
T cd04955 281 TNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELE----ADPEEVSAMAKAARERIREKYTWE 352 (363)
T ss_pred CChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHH----hCHHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999966 7999988776 899997777 899999999999999999999996
Q ss_pred hhhhccchHHHH
Q 003987 758 SDGIVDPSPFVI 769 (781)
Q Consensus 758 ~~~il~~ye~ll 769 (781)
. +++.|.+++
T Consensus 353 ~--~~~~~~~~y 362 (363)
T cd04955 353 K--IADQYEELY 362 (363)
T ss_pred H--HHHHHHHHh
Confidence 5 556676665
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=339.28 Aligned_cols=397 Identities=16% Similarity=0.132 Sum_probs=264.6
Q ss_pred CcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcc-----
Q 003987 300 DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKG----- 374 (781)
Q Consensus 300 ~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~----- 374 (781)
..||.++.+..+|-++.....+.=+-.|+.|...|-++||......+..+--..-.-.+.+...+-+++...+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (578)
T PRK15490 172 GSGGAERQISRLAIEIARKYRQKGKIGGLKVEEPVELIIRSLTPELRQDFFLKEVLEEQVEVLEIAKITGNLFDDATIES 251 (578)
T ss_pred CCCchHHHHHHHHHHHHHHHHhcccccccccccceeEEEeecCcccCcchhHHHHHhcCCceEEeeccchhhhhhccccc
Confidence 479999999977776544444444445788888888999997665554332111111333344455554222111
Q ss_pred -cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEE-ecCCcccCCCCChhhH
Q 003987 375 -ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI-AHALEKTKYPDSDIYW 452 (781)
Q Consensus 375 -~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t-~H~l~~~k~~~s~~~~ 452 (781)
+++.+++.. -|....-...+...+++ .+|||||+|...+++.+.++++..|+|++++ .|...... ...
T Consensus 252 ~~~~~~~~~~--~~~~~~~~~~l~~~ir~---~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~--~~r--- 321 (578)
T PRK15490 252 PELRLLLSHL--PPVCKYGIKHLVPHLCE---RKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVV--RKR--- 321 (578)
T ss_pred hHHHHHHhcC--ChHHHHHHHHHHHHHHH---cCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcc--hhh---
Confidence 111111110 01111111223333333 4999999999888888999999999999654 56522111 001
Q ss_pred hhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCC
Q 003987 453 KKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDI 532 (781)
Q Consensus 453 k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~ 532 (781)
.+...|....+ ....+..+| +++.|....+. +.+ ..|+ ...|+.+||||+|...
T Consensus 322 -~~~~e~~~~~~---a~~i~~~sd-~v~~s~~v~~~-------l~~------------~lgi--p~~KI~VIyNGVD~~r 375 (578)
T PRK15490 322 -LFKPEYEPLYQ---ALAVVPGVD-FMSNNHCVTRH-------YAD------------WLKL--EAKHFQVVYNGVLPPS 375 (578)
T ss_pred -HHHHHHHHhhh---hceeEecch-hhhccHHHHHH-------HHH------------HhCC--CHHHEEEEeCCcchhh
Confidence 11111110000 001122333 34444433221 111 1133 3779999999999998
Q ss_pred CCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCc
Q 003987 533 YFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGY 612 (781)
Q Consensus 533 f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g 612 (781)
|.|........+. +...++ +++.++|+++||+...||...+++++.++.+..|+++|+|+|+|
T Consensus 376 f~p~~~~~~~~r~---------------~~~~~l--~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG 438 (578)
T PRK15490 376 TEPSSEVPHKIWQ---------------QFTQKT--QDADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDG 438 (578)
T ss_pred cCccchhhHHHHH---------------Hhhhcc--CCCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCc
Confidence 8775432111100 001223 34567899999999999999999999998877899999999999
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcE
Q 003987 613 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPT 692 (781)
Q Consensus 613 ~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPV 692 (781)
+. .++++++++++++.++|+|+|++ .++..+|+. +|+||+||.+|+||++++|||+||+||
T Consensus 439 ~~------------~eeLk~la~elgL~d~V~FlG~~------~Dv~~~Laa-ADVfVlPS~~EGfp~vlLEAMA~GlPV 499 (578)
T PRK15490 439 DL------------RAEAQKRAEQLGILERILFVGAS------RDVGYWLQK-MNVFILFSRYEGLPNVLIEAQMVGVPV 499 (578)
T ss_pred hh------------HHHHHHHHHHcCCCCcEEECCCh------hhHHHHHHh-CCEEEEcccccCccHHHHHHHHhCCCE
Confidence 76 67899999999999999999953 467888885 999999999999999999999999999
Q ss_pred EEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003987 693 FATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 693 VaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
|+|+.||..|+|.+|++|++++++|++++++++..+ ..+..+.+.+..|+++|++++.++|||+. +++.|+++++.
T Consensus 500 VATdvGG~~EiV~dG~nG~LVp~~D~~aLa~ai~lA-~aL~~ll~~~~~mg~~ARe~V~e~FS~e~--Mv~~y~ki~~~ 575 (578)
T PRK15490 500 ISTPAGGSAECFIEGVSGFILDDAQTVNLDQACRYA-EKLVNLWRSRTGICQQTQSFLQERFTVEH--MVGTFVKTIAS 575 (578)
T ss_pred EEeCCCCcHHHcccCCcEEEECCCChhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCHHH--HHHHHHHHHHh
Confidence 999999999999999999999999999988876332 22334555667899999999999999955 66889888864
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=318.67 Aligned_cols=365 Identities=16% Similarity=0.196 Sum_probs=278.3
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~ 358 (781)
++|+++|+|.| |.+||++.++. .|++.|.+.||.|. ++|..+.+..|-.+ .
T Consensus 1 ~~i~mVsdff~---------P~~ggveshiy--------~lSq~li~lghkVv----vithayg~r~giry------l-- 51 (426)
T KOG1111|consen 1 SRILMVSDFFY---------PSTGGVESHIY--------ALSQCLIRLGHKVV----VITHAYGNRVGIRY------L-- 51 (426)
T ss_pred CcceeeCcccc---------cCCCChhhhHH--------HhhcchhhcCCeEE----EEeccccCccceee------e--
Confidence 58999999998 56899999999 88999999999998 99998877544322 2
Q ss_pred CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCch--HHHHHHHHHcCCcEEEE
Q 003987 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN--LVASLLAYKMGITQCTI 436 (781)
Q Consensus 359 ~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~--lva~llar~~gvp~v~t 436 (781)
+.+.+++.+|+... .+...+|.+.....-+...+.+ ++..|||+|.+.+. --+...++.+|...|+|
T Consensus 52 t~glkVyylp~~v~--------~n~tT~ptv~~~~Pllr~i~lr---E~I~ivhghs~fS~lahe~l~hartMGlktVfT 120 (426)
T KOG1111|consen 52 TNGLKVYYLPAVVG--------YNQTTFPTVFSDFPLLRPILLR---ERIEIVHGHSPFSYLAHEALMHARTMGLKTVFT 120 (426)
T ss_pred cCCceEEEEeeeee--------ecccchhhhhccCcccchhhhh---hceEEEecCChHHHHHHHHHHHHHhcCceEEEe
Confidence 33688999988752 2223333332222222333333 38999999999874 44778889999999999
Q ss_pred ecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003987 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (781)
Q Consensus 437 ~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~ 516 (781)
-|++..-. ++....... .++ ..+...|.+||+|+.-.++ + .+...++
T Consensus 121 dHSlfGfa----d~~si~~n~----ll~-----~sL~~id~~IcVshtsken---t----------------vlr~~L~- 167 (426)
T KOG1111|consen 121 DHSLFGFA----DIGSILTNK----LLP-----LSLANIDRIICVSHTSKEN---T----------------VLRGALA- 167 (426)
T ss_pred cccccccc----chhhhhhcc----eee-----eeecCCCcEEEEeecCCCc---e----------------EEEeccC-
Confidence 99874422 211111111 122 3577899999999865331 1 1112233
Q ss_pred CCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHH
Q 003987 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (781)
Q Consensus 517 f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~ 596 (781)
..|+.+|||.++.+.|.|.+.... ..+...|..++||..+||++.|++++.+
T Consensus 168 -p~kvsvIPnAv~~~~f~P~~~~~~---------------------------S~~i~~ivv~sRLvyrKGiDll~~iIp~ 219 (426)
T KOG1111|consen 168 -PAKVSVIPNAVVTHTFTPDAADKP---------------------------SADIITIVVASRLVYRKGIDLLLEIIPS 219 (426)
T ss_pred -HhHeeeccceeeccccccCccccC---------------------------CCCeeEEEEEeeeeeccchHHHHHHHHH
Confidence 679999999999999999653210 2334679999999999999999999999
Q ss_pred hhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCC
Q 003987 597 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (781)
Q Consensus 597 l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 676 (781)
+.+++|+++|+|+|+||. ...+++..+++.++++|.++| .++++++.+.+.+ .|+|++||+.|
T Consensus 220 vc~~~p~vrfii~GDGPk------------~i~lee~lEk~~l~~rV~~lG----~v~h~~Vr~vl~~-G~IFlntSlTE 282 (426)
T KOG1111|consen 220 VCDKHPEVRFIIIGDGPK------------RIDLEEMLEKLFLQDRVVMLG----TVPHDRVRDVLVR-GDIFLNTSLTE 282 (426)
T ss_pred HHhcCCCeeEEEecCCcc------------cchHHHHHHHhhccCceEEec----ccchHHHHHHHhc-CcEEeccHHHH
Confidence 999999999999999997 567888899999999999999 7889999999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003987 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 677 ~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw 756 (781)
+||++++|||+||+|||+|++||.+|++.++ -......+++++++++.+.+.++...|. .-.+++.+.|+|
T Consensus 283 afc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~p~-------~~h~~v~~~y~w 353 (426)
T KOG1111|consen 283 AFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTLPL-------EFHDRVKKMYSW 353 (426)
T ss_pred HHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccCch-------hHHHHHHHhccH
Confidence 9999999999999999999999999999665 2223444799999999999877776653 346678889999
Q ss_pred chhhhccchHHHHHhc
Q 003987 757 SSDGIVDPSPFVINVI 772 (781)
Q Consensus 757 ~~~~il~~ye~ll~~~ 772 (781)
+ .++++-|+++..+
T Consensus 354 ~--dVa~rTekvy~r~ 367 (426)
T KOG1111|consen 354 K--DVAERTEKVYDRA 367 (426)
T ss_pred H--HHHHHHHHHHHHH
Confidence 4 4566667766544
|
|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=325.49 Aligned_cols=286 Identities=20% Similarity=0.228 Sum_probs=210.7
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003987 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 405 ~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
..+|||||+|++....+. .+++..++|++++.|+..... ....|+ + ....++.+|.+++.|..
T Consensus 83 ~~~~Dvv~~h~~~~~~~~-~~~~~~~~~~i~~~H~~~~~~---~~~~~~-------~------~~~~~~~~d~~i~~~~~ 145 (372)
T cd03792 83 DLDADVVVIHDPQPLALP-LFKKKRGRPWIWRCHIDLSSP---NRRVWD-------F------LQPYIEDYDAAVFHLPE 145 (372)
T ss_pred cCCCCEEEECCCCchhHH-HhhhcCCCeEEEEeeeecCCC---cHHHHH-------H------HHHHHHhCCEEeecHHH
Confidence 458999999988753322 223334899999999743211 111111 1 12456789999988844
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCC--CCcHHHHHHhhhhcchhhhccCcccccc
Q 003987 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF--PYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (781)
Q Consensus 485 ~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~--p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (781)
.+. .++. ..++ +||||+|..... +........ .++
T Consensus 146 ~~~------------------------~~~~--~~~~-vipngvd~~~~~~~~~~~~~~~~----------------~~~ 182 (372)
T cd03792 146 YVP------------------------PQVP--PRKV-IIPPSIDPLSGKNRELSPADIEY----------------ILE 182 (372)
T ss_pred hcC------------------------CCCC--CceE-EeCCCCCCCccccCCCCHHHHHH----------------HHH
Confidence 322 0121 3455 999999975322 221111110 113
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~ 642 (781)
.+|+ ++++++|+++||+++.||++.+++|++++.+..++++|+|+|+|+.. +++ ..+.++++.++.++.++
T Consensus 183 ~~~~--~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~----~~~---~~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 183 KYGI--DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATD----DPE---GWIVYEEVLEYAEGDPD 253 (372)
T ss_pred HhCC--CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCC----Cch---hHHHHHHHHHHhCCCCC
Confidence 3565 56789999999999999999999999999887789999999999651 111 12334555556778889
Q ss_pred EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHH
Q 003987 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAA 722 (781)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA 722 (781)
|.|+|... ++.+++..+++ ++|+||+||.+|+||++++|||+||+|||+|+.||..++|.++.+|++++ ++++++
T Consensus 254 v~~~~~~~--~~~~~~~~~~~-~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~~~~a 328 (372)
T cd03792 254 IHVLTLPP--VSDLEVNALQR-ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TVEEAA 328 (372)
T ss_pred eEEEecCC--CCHHHHHHHHH-hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--CcHHHH
Confidence 99998432 36788999999 59999999999999999999999999999999999999999999999987 567888
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 723 ELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
++|.+++ .|++.+++|+++|++.+.++|||+. +++.|.++++
T Consensus 329 ~~i~~ll----~~~~~~~~~~~~a~~~~~~~~s~~~--~~~~~~~~~~ 370 (372)
T cd03792 329 VRILYLL----RDPELRRKMGANAREHVRENFLITR--HLKDYLYLIS 370 (372)
T ss_pred HHHHHHH----cCHHHHHHHHHHHHHHHHHHcCHHH--HHHHHHHHHH
Confidence 8888777 8999999999999999999999965 4566766664
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=311.50 Aligned_cols=366 Identities=18% Similarity=0.200 Sum_probs=259.3
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||++++++.+ |..||.+.++. +|++.|+++||+|+ |+|......... ....
T Consensus 1 kIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~~~-- 51 (375)
T cd03821 1 KILHVIPSFD---------PKYGGPVRVVL--------NLSKALAKLGHEVT----VATTDAGGDPLL------VALN-- 51 (375)
T ss_pred CeEEEcCCCC---------cccCCeehHHH--------HHHHHHHhcCCcEE----EEecCCCCccch------hhcc--
Confidence 6899987654 56899999999 77778899999999 887653321110 0000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHH-HHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEE
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLE-TFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTI 436 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~-~f~~~~~~~i~~~~~~kpDIIh~~~~~~--~lva~llar~~gvp~v~t 436 (781)
+........... ....... .+.......+ .....+||+||+|.... ...+...++..++|++++
T Consensus 52 -~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~-~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~ 118 (375)
T cd03821 52 -GVPVKLFSINVA-----------YGLNLARYLFPPSLLAWL-RLNIREADIVHVHGLWSYPSLAAARAARKYGIPYVVS 118 (375)
T ss_pred -Cceeeecccchh-----------hhhhhhhhccChhHHHHH-HHhCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEE
Confidence 000000000000 0000000 0111111111 12245899999987443 556667777889999999
Q ss_pred ecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003987 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (781)
Q Consensus 437 ~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~ 516 (781)
.|+.......... .++ +....+......++.++.++++|......... ..
T Consensus 119 ~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~-----------------------~~ 168 (375)
T cd03821 119 PHGMLDPWALPHK-ALK------KRLAWFLFERRLLQAAAAVHATSEQEAAEIRR-----------------------LG 168 (375)
T ss_pred ccccccccccccc-hhh------hHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh-----------------------hC
Confidence 9986432211010 111 11111223456788899999998765442110 11
Q ss_pred CCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHH
Q 003987 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (781)
Q Consensus 517 f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~ 596 (781)
+..++.++|||+|.+.+.+......+ +.++. +.++++|+++||+.+.||++.+++++.+
T Consensus 169 ~~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~ 227 (375)
T cd03821 169 LKAPIAVIPNGVDIPPFAALPSRGRR-------------------RKFPI--LPDKRIILFLGRLHPKKGLDLLIEAFAK 227 (375)
T ss_pred CcccEEEcCCCcChhccCcchhhhhh-------------------hhccC--CCCCcEEEEEeCcchhcCHHHHHHHHHH
Confidence 26689999999999887664432211 12333 5678899999999999999999999999
Q ss_pred hhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCC
Q 003987 597 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (781)
Q Consensus 597 l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 676 (781)
+.+.+++++|+++|.+.. .+...++.+++++++.++|.|+| .++.+++..+++. +|++|+||..|
T Consensus 228 l~~~~~~~~l~i~G~~~~----------~~~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~e 292 (375)
T cd03821 228 LAERFPDWHLVIAGPDEG----------GYRAELKQIAAALGLEDRVTFTG----MLYGEDKAAALAD-ADLFVLPSHSE 292 (375)
T ss_pred hhhhcCCeEEEEECCCCc----------chHHHHHHHHHhcCccceEEEcC----CCChHHHHHHHhh-CCEEEeccccC
Confidence 988888999999998765 23455666678899999999999 6667899999995 99999999999
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003987 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 677 ~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw 756 (781)
+||++++|||+||+|||+|+.||..|++.+ .+|+++++ +.++++++|.+++ .+++.++++++++++.+.++|||
T Consensus 293 ~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~ 366 (375)
T cd03821 293 NFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVDALAAALRRAL----ELPQRLKAMGENGRALVEERFSW 366 (375)
T ss_pred CCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCH
Confidence 999999999999999999999999999988 88998875 5599999998877 89999999999999999999999
Q ss_pred chh
Q 003987 757 SSD 759 (781)
Q Consensus 757 ~~~ 759 (781)
+..
T Consensus 367 ~~~ 369 (375)
T cd03821 367 TAI 369 (375)
T ss_pred HHH
Confidence 764
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=309.58 Aligned_cols=353 Identities=18% Similarity=0.236 Sum_probs=257.2
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++..+ |+.||.+.++. +|++.|.++||+|+ |++......... .. .
T Consensus 1 kil~i~~~~~---------p~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~------~~---~ 50 (357)
T cd03795 1 RVLHVGKFYP---------PDRGGIEQVIR--------DLAEGLAARGIEVA----VLCASPEPKGRD------EE---R 50 (357)
T ss_pred CeeEecCCCC---------CCCCcHHHHHH--------HHHHHHHhCCCceE----EEecCCCCcchh------hh---c
Confidence 6899986554 56899999999 77788899999999 887653322111 01 1
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~ 439 (781)
.+..+.+++..... ...+.... ....+. ....+||+||+|++.............++|.+.+.|+
T Consensus 51 ~~~~~~~~~~~~~~----------~~~~~~~~----~~~~~~-~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 115 (357)
T cd03795 51 NGHRVIRAPSLLNV----------ASTPFSPS----FFKQLK-KLAKKADVIHLHFPNPLADLALLLLPRKKPVVVHWHS 115 (357)
T ss_pred cCceEEEeeccccc----------ccccccHH----HHHHHH-hcCCCCCEEEEecCcchHHHHHHHhccCceEEEEEcC
Confidence 13355555433210 00011001 111111 1245899999998776333333333368899999996
Q ss_pred CcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003987 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 440 l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~ 519 (781)
...... .. ...|+ ..+...++.||.++++|......... +..+..
T Consensus 116 ~~~~~~----~~----~~~~~-----~~~~~~~~~~d~vi~~s~~~~~~~~~----------------------~~~~~~ 160 (357)
T cd03795 116 DIVKQK----LL----LKLYR-----PLQRRFLRRADAIVATSPNYAETSPV----------------------LRRFRD 160 (357)
T ss_pred hhhccc----hh----hhhhh-----HHHHHHHHhcCEEEeCcHHHHHHHHH----------------------hcCCcc
Confidence 322110 01 11111 12345789999999999876542111 011136
Q ss_pred ceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc
Q 003987 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (781)
++.+||||+|.+.+.+....... .... +.++++|+++||+.+.||++.+++|++++.
T Consensus 161 ~~~~i~~gi~~~~~~~~~~~~~~--------------------~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~- 217 (357)
T cd03795 161 KVRVIPLGLDPARYPRPDALEEA--------------------IWRR--AAGRPFFLFVGRLVYYKGLDVLLEAAAALP- 217 (357)
T ss_pred ceEEecCCCChhhcCCcchhhhH--------------------hhcC--CCCCcEEEEecccccccCHHHHHHHHHhcc-
Confidence 88999999999877654322110 0111 456789999999999999999999999886
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCC
Q 003987 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEA 677 (781)
Q Consensus 600 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~ 677 (781)
+++|+|+|+|+. ...+.++++++++.++|.|+| .++.+++..+++. +|++++||. .|+
T Consensus 218 ---~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~V~~~g----~v~~~~~~~~~~~-ad~~i~ps~~~~e~ 277 (357)
T cd03795 218 ---DAPLVIVGEGPL------------EAELEALAAALGLLDRVRFLG----RLDDEEKAALLAA-CDVFVFPSVERSEA 277 (357)
T ss_pred ---CcEEEEEeCChh------------HHHHHHHHHhcCCcceEEEcC----CCCHHHHHHHHHh-CCEEEeCCcccccc
Confidence 699999999965 567888888899999999999 6777899999995 999999996 599
Q ss_pred CcHHHHHHHHcCCcEEEcCcccccccccc-CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003987 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEH-GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 678 fGltvlEAMa~GlPVVaT~~gG~~EiI~d-g~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw 756 (781)
||++++|||+||+|||+|+.|+..+.+.+ +.+|++++++|+++++++|.+++ +|++.+++|+++|++.+.++|||
T Consensus 278 ~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 278 FGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLL----EDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred cchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHhcch
Confidence 99999999999999999999999998886 89999999999999999998887 89999999999999999999999
Q ss_pred chh
Q 003987 757 SSD 759 (781)
Q Consensus 757 ~~~ 759 (781)
+.+
T Consensus 354 ~~~ 356 (357)
T cd03795 354 DRM 356 (357)
T ss_pred Hhh
Confidence 765
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=308.07 Aligned_cols=268 Identities=21% Similarity=0.296 Sum_probs=221.4
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCH
Q 003987 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (781)
Q Consensus 405 ~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (781)
..+||+||+|+... ..++.+.++..++|++++.|+......... ......++.+|.++++|.
T Consensus 77 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~vi~~s~ 139 (355)
T cd03799 77 RLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSPDA-----------------IDLDEKLARADFVVAISE 139 (355)
T ss_pred hcCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccCch-----------------HHHHHHHhhCCEEEECCH
Confidence 35899999998754 455566666668999999996432111000 123457889999999999
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccc
Q 003987 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (781)
Q Consensus 484 ~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 563 (781)
...+.++.. .|.. ..++.++|||+|.+.+.+...
T Consensus 140 ~~~~~l~~~-------------------~~~~--~~~~~vi~~~~d~~~~~~~~~------------------------- 173 (355)
T cd03799 140 YNRQQLIRL-------------------LGCD--PDKIHVVHCGVDLERFPPRPP------------------------- 173 (355)
T ss_pred HHHHHHHHh-------------------cCCC--cccEEEEeCCcCHHHcCCccc-------------------------
Confidence 876632221 1222 678999999999877654320
Q ss_pred cCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003987 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (781)
Q Consensus 564 ~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V 643 (781)
. ...+++.|+++|++.+.||++.+++++.++.+..++++|+++|+++. .+.+++.++++++.++|
T Consensus 174 ~---~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v 238 (355)
T cd03799 174 P---PPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL------------RDELEALIAELGLEDRV 238 (355)
T ss_pred c---ccCCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc------------HHHHHHHHHHcCCCCeE
Confidence 0 03456789999999999999999999999988778999999999976 56788889999999999
Q ss_pred EEeccccCcCChHHHHHHHHccCcEEEEcCCC------CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCC
Q 003987 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFY------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYH 717 (781)
Q Consensus 644 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~------E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d 717 (781)
+|.| .++.+++..+++. +|++++||.. |+||++++|||+||+|||+|+.|+..|++.++.+|++++++|
T Consensus 239 ~~~g----~~~~~~l~~~~~~-adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~ 313 (355)
T cd03799 239 TLLG----AKSQEEVRELLRA-ADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGD 313 (355)
T ss_pred EECC----cCChHHHHHHHHh-CCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCC
Confidence 9999 6677899999995 9999999998 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 718 PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 718 ~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
+++++++|.+++ .+++.+.+++++|++++.++|||+..
T Consensus 314 ~~~l~~~i~~~~----~~~~~~~~~~~~a~~~~~~~~s~~~~ 351 (355)
T cd03799 314 PEALADAIERLL----DDPELRREMGEAGRARVEEEFDIRKQ 351 (355)
T ss_pred HHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 999999998887 79999999999999999999999765
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=313.27 Aligned_cols=349 Identities=15% Similarity=0.166 Sum_probs=252.3
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++.. ..||.+.++. ++++.|.+.||+|+ ++|....... ..... ..
T Consensus 1 kIl~~~~~~-----------~~GG~~~~~~--------~l~~~L~~~~~~v~----~i~~~~~~~~---~~~~~----~~ 50 (358)
T cd03812 1 KILHIVGTM-----------NRGGIETFIM--------NYYRNLDRSKIQFD----FLVTSKEEGD---YDDEI----EK 50 (358)
T ss_pred CEEEEeCCC-----------CCccHHHHHH--------HHHHhcCccceEEE----EEEeCCCCcc---hHHHH----HH
Confidence 688887542 3699999999 66677788999999 8876532210 00011 11
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE-EEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ-CTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~-v~t~H 438 (781)
.+..+++++.... ..+ .+...+.+.+. ..+||+||+|......++.++++..+.|. +.+.|
T Consensus 51 ~~~~~~~~~~~~~-----------~~~----~~~~~~~~~~~---~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 112 (358)
T cd03812 51 LGGKIYYIPARKK-----------NPL----KYFKKLYKLIK---KNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSH 112 (358)
T ss_pred cCCeEEEecCCCc-----------cHH----HHHHHHHHHHh---cCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEec
Confidence 2456666544321 112 12222333333 34899999999887677777777788775 45677
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
.............+. ...+...++.+|.++++|.......... ...
T Consensus 113 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~s~~~~~~~~~~-----------------------~~~ 158 (358)
T cd03812 113 NTSDSHDKKKKILKY-----------KVLRKLINRLATDYLACSEEAGKWLFGK-----------------------VKN 158 (358)
T ss_pred cccccccccchhhHH-----------HHHHHHHHhcCCEEEEcCHHHHHHHHhC-----------------------CCc
Confidence 654332111110000 1123456788999999998765521110 125
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+||||+|.+.+.+........ ...+. ..++++|+++||+.+.||++.++++++++.
T Consensus 159 ~~~~vi~ngvd~~~~~~~~~~~~~~------------------~~~~~--~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~ 218 (358)
T cd03812 159 KKFKVIPNGIDLEKFIFNEEIRKKR------------------RELGI--LEDKFVIGHVGRFSEQKNHEFLIEIFAELL 218 (358)
T ss_pred ccEEEEeccCcHHHcCCCchhhhHH------------------HHcCC--CCCCEEEEEEeccccccChHHHHHHHHHHH
Confidence 7899999999998876654322111 11233 467889999999999999999999999999
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
+..++++|+|+|+|+. .+.+++.++++++.++|.|+|. .+++..+++. +|++|+||.+|+|
T Consensus 219 ~~~~~~~l~ivG~g~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~v~ps~~E~~ 279 (358)
T cd03812 219 KKNPNAKLLLVGDGEL------------EEEIKKKVKELGLEDKVIFLGV------RNDVPELLQA-MDVFLFPSLYEGL 279 (358)
T ss_pred HhCCCeEEEEEeCCch------------HHHHHHHHHhcCCCCcEEEecc------cCCHHHHHHh-cCEEEecccccCC
Confidence 8889999999999976 5678888999999999999995 3467888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003987 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 679 GltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~y 754 (781)
|++++|||+||+|||+|+.||..|++.+ ..|++..++++++++++|.+++ +||+.++.++..+.......+
T Consensus 280 ~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~----~~~~~~~~~~~~~~~~~~~~~ 350 (358)
T cd03812 280 PLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLK----SEDRRERSSESIKKKGLDADD 350 (358)
T ss_pred CHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHH----hCcchhhhhhhhhhccchhhh
Confidence 9999999999999999999999999988 5677777778999999998887 899999998888877664433
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=304.59 Aligned_cols=382 Identities=18% Similarity=0.246 Sum_probs=270.3
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++|.+.+ |..||...++. .+++.|+++||+|+ +++............. ......
T Consensus 1 kIl~i~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~~~~~--~~~~~~ 57 (394)
T cd03794 1 KILILSQYFP---------PELGGGAFRTT--------ELAEELVKRGHEVT----VITGSPNYPSGKIYKG--YKREEV 57 (394)
T ss_pred CEEEEecccC---------CccCCcceeHH--------HHHHHHHhCCceEE----EEecCCCccccccccc--ceEEec
Confidence 6999997665 34589999999 77777899999999 8876643322111000 011122
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 437 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~--~lva~llar~~gvp~v~t~ 437 (781)
.++++++++...... ..++.+ +..+ ..+.......+.. ...+||+||++.+.. ...+..+++..++|++++.
T Consensus 58 ~~~~~~~~~~~~~~~--~~~~~~--~~~~-~~~~~~~~~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (394)
T cd03794 58 DGVRVHRVPLPPYKK--NGLLKR--LLNY-LSFALSALLALLK-RRRRPDVIIATSPPLLIALAALLLARLKGAPFVLEV 131 (394)
T ss_pred CCeEEEEEecCCCCc--cchHHH--HHhh-hHHHHHHHHHHHh-cccCCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 357777777654321 000000 1111 1222223333321 245899999998432 5666677777799999999
Q ss_pred cCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003987 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (781)
Q Consensus 438 H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f 517 (781)
|+.+............. ...+.+.. ..+...++.+|.++++|....+.+. ..++.
T Consensus 132 h~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~d~vi~~s~~~~~~~~--------------------~~~~~-- 186 (394)
T cd03794 132 RDLWPESAVALGLLKNG-SLLYRLLR--KLERLIYRRADAIVVISPGMREYLV--------------------RRGVP-- 186 (394)
T ss_pred hhhcchhHHHccCcccc-chHHHHHH--HHHHHHHhcCCEEEEECHHHHHHHH--------------------hcCCC--
Confidence 98754322111000000 00001111 2355678999999999988765221 01222
Q ss_pred CCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHh
Q 003987 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (781)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (781)
..++.++|||+|...+.+......+ ...+. ..++++|+++|++.+.||++.+++++.++
T Consensus 187 ~~~~~~i~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l 245 (394)
T cd03794 187 PEKISVIPNGVDLELFKPPPADESL-------------------RKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALL 245 (394)
T ss_pred cCceEEcCCCCCHHHcCCccchhhh-------------------hhccC--CCCcEEEEEecCcccccCHHHHHHHHHHH
Confidence 6799999999998777654432211 01121 45678899999999999999999999999
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCC
Q 003987 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (781)
Q Consensus 598 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 677 (781)
.+. ++++|+++|+|+. .+.+.+++...++ ++|.++| .++.+++..+++. +|++++|+..|+
T Consensus 246 ~~~-~~~~l~i~G~~~~------------~~~~~~~~~~~~~-~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~ 306 (394)
T cd03794 246 KDR-PDIRFLIVGDGPE------------KEELKELAKALGL-DNVTFLG----RVPKEELPELLAA-ADVGLVPLKPGP 306 (394)
T ss_pred hhc-CCeEEEEeCCccc------------HHHHHHHHHHcCC-CcEEEeC----CCChHHHHHHHHh-hCeeEEeccCcc
Confidence 876 7899999999876 4566666666666 5799999 6677899999995 999999999887
Q ss_pred C-----cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Q 003987 678 F-----GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (781)
Q Consensus 678 f-----GltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~ 752 (781)
+ |++++|||+||+|||+|+.+|..+++.++.+|++++++|+++++++|.+++ .|++.++++++++++.+.+
T Consensus 307 ~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~ 382 (394)
T cd03794 307 AFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELL----DDPEERAEMGENGRRYVEE 382 (394)
T ss_pred cccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHH
Confidence 5 888999999999999999999999999989999999999999999998887 8999999999999999999
Q ss_pred hcCcchh
Q 003987 753 RLVVSSD 759 (781)
Q Consensus 753 ~ysw~~~ 759 (781)
+|||+..
T Consensus 383 ~~s~~~~ 389 (394)
T cd03794 383 KFSREKL 389 (394)
T ss_pred hhcHHHH
Confidence 9999765
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=302.54 Aligned_cols=360 Identities=19% Similarity=0.271 Sum_probs=258.6
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||++++...+ |..||...++. .++++|.++||+|+ ++|...+...... ...
T Consensus 1 kil~~~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~------~~~-- 51 (374)
T cd03817 1 KIGIFTDTYL---------PQVNGVATSIR--------RLAEELEKRGHEVY----VVAPSYPGAPEEE------EVV-- 51 (374)
T ss_pred CeeEeehhcc---------CCCCCeehHHH--------HHHHHHHHcCCeEE----EEeCCCCCCCccc------ccc--
Confidence 6899986543 67899999999 78888899999999 8887644321110 000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H 438 (781)
.....+.+.... ......+ .+...+...+. ..+||+||++.... +..+..++++.++|++.+.|
T Consensus 52 -~~~~~~~~~~~~-------~~~~~~~----~~~~~~~~~~~---~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 116 (374)
T cd03817 52 -VVRPFRVPTFKY-------PDFRLPL----PIPRALIIILK---ELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYH 116 (374)
T ss_pred -cccccccccchh-------hhhhccc----cHHHHHHHHHh---hcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEec
Confidence 111111111100 0000011 11111222222 34899999998654 56677888899999999999
Q ss_pred CCcccCCCCChhhHhhhhccccchhhh-hHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQF-TADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~-~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f 517 (781)
+....- .... ............ ..+...++.||.+++.|....+..++ + +.
T Consensus 117 ~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~----~----------------~~--- 168 (374)
T cd03817 117 TMYEDY-THYV----PLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLLRE----Y----------------GV--- 168 (374)
T ss_pred CCHHHH-HHHH----hcccchhHHHHHHHHHHHHhhhCCEEEeccHHHHHHHHh----c----------------CC---
Confidence 864311 0000 000000000000 23556788999999999876442111 1 22
Q ss_pred CCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHh
Q 003987 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKN 597 (781)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l 597 (781)
..++.++|||+|...+.+......+ ..++. +.++++|+++|++.+.||++.+++++.++
T Consensus 169 ~~~~~vi~~~~~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~~ 227 (374)
T cd03817 169 KRPIEVIPTGIDLDRFEPVDGDDER-------------------RKLGI--PEDEPVLLYVGRLAKEKNIDFLIRAFARL 227 (374)
T ss_pred CCceEEcCCccchhccCccchhHHH-------------------HhcCC--CCCCeEEEEEeeeecccCHHHHHHHHHHH
Confidence 3468999999999887665433221 12333 45678899999999999999999999999
Q ss_pred hccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCC
Q 003987 598 SQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (781)
Q Consensus 598 ~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 677 (781)
.+..++++|+++|+++. .+.++++++++++.++|.|+| .++.+++..+++. +|++++|+..|+
T Consensus 228 ~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~l~~s~~e~ 290 (374)
T cd03817 228 LKEEPDVKLVIVGDGPE------------REELEELARELGLADRVIFTG----FVPREELPDYYKA-ADLFVFASTTET 290 (374)
T ss_pred HHhCCCeEEEEEeCCch------------HHHHHHHHHHcCCCCcEEEec----cCChHHHHHHHHH-cCEEEecccccC
Confidence 87778999999999866 567888888999999999999 6677899999995 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003987 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 678 fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~y 754 (781)
+|++++|||+||+|||+|+.|+..|++.++.+|+++++.+. +++++|.+++ ++++.+++|++++++.+.+.+
T Consensus 291 ~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 291 QGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLL----QDPELRRRLSKNAEESAEKFS 362 (374)
T ss_pred cChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHH----hChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998887 8999998777 899999999999999996543
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=302.60 Aligned_cols=332 Identities=16% Similarity=0.176 Sum_probs=235.9
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~ 358 (781)
|||+++++..+| .+.|..||.++++. +|++.|.++||+|+ +++...+.... ..
T Consensus 1 MkI~~i~~~~~~-----~~~~~~GG~~~~~~--------~l~~~L~~~g~~V~----v~~~~~~~~~~-----~~----- 53 (335)
T cd03802 1 MRIALVAPPREP-----VPPPAYGGTERVVA--------ALTEGLVARGHEVT----LFASGDSKTAA-----PL----- 53 (335)
T ss_pred CeEEEEcCCccc-----CCCcccCcHHHHHH--------HHHHHHHhcCceEE----EEecCCCCccc-----ce-----
Confidence 799999986654 13467899999999 77777899999999 88865332100 00
Q ss_pred CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003987 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 359 ~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H 438 (781)
......+.. ................+.+.+. ..+|||||+|....... +++..++|+|++.|
T Consensus 54 ---~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~~Divh~~~~~~~~~---~~~~~~~~~v~~~h 115 (335)
T cd03802 54 ---VPVVPEPLR---------LDAPGRDRAEAEALALAERALA---AGDFDIVHNHSLHLPLP---FARPLPVPVVTTLH 115 (335)
T ss_pred ---eeccCCCcc---------cccchhhHhhHHHHHHHHHHHh---cCCCCEEEecCcccchh---hhcccCCCEEEEec
Confidence 011000000 0000000111122222223332 35899999999887554 56778999999999
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
+....... + ........+.++++|...... + .. .
T Consensus 116 ~~~~~~~~-----~---------------~~~~~~~~~~~~~~s~~~~~~-------------------~-----~~--~ 149 (335)
T cd03802 116 GPPDPELL-----K---------------LYYAARPDVPFVSISDAQRRP-------------------W-----PP--L 149 (335)
T ss_pred CCCCcccc-----h---------------HHHhhCcCCeEEEecHHHHhh-------------------c-----cc--c
Confidence 76432210 0 113456778889998776441 0 01 1
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+||||+|.+.|.+. ..+++.|+++||+.+.||++.+++++++
T Consensus 150 ~~~~vi~ngvd~~~~~~~--------------------------------~~~~~~i~~~Gr~~~~Kg~~~li~~~~~-- 195 (335)
T cd03802 150 PWVATVHNGIDLDDYPFR--------------------------------GPKGDYLLFLGRISPEKGPHLAIRAARR-- 195 (335)
T ss_pred cccEEecCCcChhhCCCC--------------------------------CCCCCEEEEEEeeccccCHHHHHHHHHh--
Confidence 588899999999877541 2346689999999999999999999865
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC-CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC-CC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YE 676 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elg-L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E 676 (781)
.+++|+|+|++.. .+.+...+.+.. +.++|.|+| .++..++..+++. +|++|+||. .|
T Consensus 196 ---~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~G----~~~~~~~~~~~~~-~d~~v~ps~~~E 255 (335)
T cd03802 196 ---AGIPLKLAGPVSD------------PDYFYREIAPELLDGPDIEYLG----EVGGAEKAELLGN-ARALLFPILWEE 255 (335)
T ss_pred ---cCCeEEEEeCCCC------------HHHHHHHHHHhcccCCcEEEeC----CCCHHHHHHHHHh-CcEEEeCCcccC
Confidence 3689999999976 233444444443 568999999 5667899999995 999999997 59
Q ss_pred CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003987 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 677 ~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw 756 (781)
+||++++|||+||+|||+|+.||..|++.++.+|+++++ +++++++|.++. ..+ .+++++++.++|||
T Consensus 256 ~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~----~~~------~~~~~~~~~~~~s~ 323 (335)
T cd03802 256 PFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARAD----RLD------RAACRRRAERRFSA 323 (335)
T ss_pred CcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHh----ccH------HHHHHHHHHHhCCH
Confidence 999999999999999999999999999999999999986 999999997764 332 34678889999999
Q ss_pred chhhhccchHHHH
Q 003987 757 SSDGIVDPSPFVI 769 (781)
Q Consensus 757 ~~~~il~~ye~ll 769 (781)
+. +++.|.+++
T Consensus 324 ~~--~~~~~~~~y 334 (335)
T cd03802 324 AR--MVDDYLALY 334 (335)
T ss_pred HH--HHHHHHHHh
Confidence 65 556666654
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=302.87 Aligned_cols=362 Identities=19% Similarity=0.237 Sum_probs=256.9
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++... |..||.+.++. .|+++|.++||+|+ ++|......... ..
T Consensus 1 kIl~i~~~~~---------p~~~G~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~~~--~~-------- 49 (364)
T cd03814 1 RIAIVTDTFL---------PQVNGVVRTLQ--------RLVEHLRARGHEVL----VIAPGPFRESEG--PA-------- 49 (364)
T ss_pred CeEEEecccC---------ccccceehHHH--------HHHHHHHHCCCEEE----EEeCCchhhccC--CC--------
Confidence 6899996553 45689999999 77888899999999 888764321110 00
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H 438 (781)
....+...+......+ +.... ....+.+.+. ..+||+||++.... +..+..++++.++|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~~------~~~~~-----~~~~~~~~~~---~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 115 (364)
T cd03814 50 RVVPVPSVPLPGYPEI------RLALP-----PRRRVRRLLD---AFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYH 115 (364)
T ss_pred CceeecccccCcccce------Eeccc-----chhhHHHHHH---hcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEe
Confidence 1122222222111110 00000 0112222232 34899999886654 56777888889999999999
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
+......... ...... .+. ........+.+|.+++.|........ ... .
T Consensus 116 ~~~~~~~~~~--~~~~~~---~~~--~~~~~~~~~~~d~i~~~s~~~~~~~~----------------------~~~--~ 164 (364)
T cd03814 116 TDFPEYLRYY--GLGPLS---WLA--WAYLRWFHNRADRVLVPSPSLADELR----------------------ARG--F 164 (364)
T ss_pred cChHHHhhhc--ccchHh---Hhh--HHHHHHHHHhCCEEEeCCHHHHHHHh----------------------ccC--C
Confidence 7543211000 000000 000 11234567899999999987754100 011 4
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+++||+|.+.|.+........ ..++ +.++++|+++||+.+.||++.+++++.++.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~~~~~~------------------~~~~---~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~ 223 (364)
T cd03814 165 RRVRLWPRGVDTELFHPRRRDEALR------------------ARLG---PPDRPVLLYVGRLAPEKNLEALLDADLPLR 223 (364)
T ss_pred CceeecCCCccccccCcccccHHHH------------------HHhC---CCCCeEEEEEeccccccCHHHHHHHHHHhh
Confidence 5889999999998887654322211 1122 345678999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
+. ++++|+|+|+++. .+.++ +..++|.|+| .++.+++..+++. +|++++||..|+|
T Consensus 224 ~~-~~~~l~i~G~~~~------------~~~~~------~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~~s~~e~~ 279 (364)
T cd03814 224 RR-PPVRLVIVGDGPA------------RARLE------ARYPNVHFLG----FLDGEELAAAYAS-ADVFVFPSRTETF 279 (364)
T ss_pred hc-CCceEEEEeCCch------------HHHHh------ccCCcEEEEe----ccCHHHHHHHHHh-CCEEEECcccccC
Confidence 77 8899999999866 22332 4567899999 5678899999995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcch
Q 003987 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 679 GltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~ 758 (781)
|++++|||+||+|||+++.|+..|+++++.+|+++++.|.++++++|.+++ .|++.++++++++++.+ ++|+|+.
T Consensus 280 ~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~~~~~ 354 (364)
T cd03814 280 GLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALL----ADPELRRRMAARARAEA-ERRSWEA 354 (364)
T ss_pred CcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-hhcCHHH
Confidence 999999999999999999999999999999999999999999999998887 89999999999999999 8899965
Q ss_pred hhhccchHHHH
Q 003987 759 DGIVDPSPFVI 769 (781)
Q Consensus 759 ~~il~~ye~ll 769 (781)
. .+.+.+++
T Consensus 355 ~--~~~~~~~~ 363 (364)
T cd03814 355 F--LDNLLEAY 363 (364)
T ss_pred H--HHHHHHhh
Confidence 4 45555443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=316.45 Aligned_cols=386 Identities=13% Similarity=0.047 Sum_probs=252.7
Q ss_pred CceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeee
Q 003987 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (781)
Q Consensus 277 ~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v 356 (781)
...||++++.-. +|.+..+. +++++|+++||+|+ |+|...+.. .+..
T Consensus 2 ~~~~~~~~~~~~-------------~~~~~R~~--------~~a~~L~~~G~~V~----ii~~~~~~~--------~~~~ 48 (415)
T cd03816 2 KRKRVCVLVLGD-------------IGRSPRMQ--------YHALSLAKHGWKVD----LVGYLETPP--------HDEI 48 (415)
T ss_pred CccEEEEEEecc-------------cCCCHHHH--------HHHHHHHhcCceEE----EEEecCCCC--------CHHH
Confidence 346788887421 35566667 67888999999999 888653221 0111
Q ss_pred cCCCCeEEEEeccCC-CcccccccccccCchhhHHHHHHHHHHHHHHHc-CCCceEEEEcCCCc---hHHHHHHHHHcCC
Q 003987 357 SGTEHTHILRVPFRS-EKGILRQWISRFDVWPYLETFTEDVGSEITAEL-QGFPDFIIGNYSDG---NLVASLLAYKMGI 431 (781)
Q Consensus 357 ~~~~~~~I~rvp~~~-~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~-~~kpDIIh~~~~~~---~lva~llar~~gv 431 (781)
....++.+++++... ..+. ...+..+.......+...+...+ ..+||+||+|.+.. ...+.++++..++
T Consensus 49 ~~~~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~ 122 (415)
T cd03816 49 LSNPNITIHPLPPPPQRLNK------LPFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRRT 122 (415)
T ss_pred hcCCCEEEEECCCCcccccc------chHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCC
Confidence 122367788776653 1110 01112222211111122211111 34899999987553 4456667788899
Q ss_pred cEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeee
Q 003987 432 TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVV 511 (781)
Q Consensus 432 p~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~ 511 (781)
|+|++.|+.+..... .. ........++.. ..+...++.||.||++|....+.+.+
T Consensus 123 ~~V~~~h~~~~~~~~-~~--~~~~~~~~~~~~--~~e~~~~~~ad~ii~vS~~~~~~l~~-------------------- 177 (415)
T cd03816 123 KLIIDWHNYGYTILA-LK--LGENHPLVRLAK--WYEKLFGRLADYNLCVTKAMKEDLQQ-------------------- 177 (415)
T ss_pred eEEEEcCCchHHHHh-cc--cCCCCHHHHHHH--HHHHHHhhcCCEeeecCHHHHHHHHh--------------------
Confidence 999999986431100 00 000000011111 23556788999999999987552211
Q ss_pred ccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcc-ccccccCCCCCCCCCEEEEEeeccCCCChHHH
Q 003987 512 HGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE-QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGL 590 (781)
Q Consensus 512 ~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~-~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~L 590 (781)
.|++ ..|+.|||||. ...|.|.......... .. ...-+++. ......++. +++..+++++||+.+.||++.|
T Consensus 178 ~~~~--~~ki~vI~Ng~-~~~f~p~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~-~~~~~vi~~~grl~~~K~~~~l 250 (415)
T cd03816 178 FNNW--KIRATVLYDRP-PEQFRPLPLEEKHELF-LK--LAKTFLTRELRIGAVQLS-EERPALLVSSTSWTPDEDFGIL 250 (415)
T ss_pred hhcc--CCCeeecCCCC-HHHceeCcHHHHHHHH-Hh--ccccccccccccccceec-CCCceEEEEeccccCCCCHHHH
Confidence 1332 68999999994 4567665433211100 00 00000000 000011221 2344578889999999999999
Q ss_pred HHHHHHhhc------cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHc
Q 003987 591 VECYGKNSQ------LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD 664 (781)
Q Consensus 591 ieA~~~l~~------~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~ 664 (781)
++|++++++ .+|+++|+|+|+|+. .+.++++++++++.+.+.+.| .++.+++..+|+.
T Consensus 251 i~A~~~l~~~~~~~~~~~~i~l~ivG~G~~------------~~~l~~~~~~~~l~~~~~~~g----~~~~~~~~~~l~~ 314 (415)
T cd03816 251 LDALVAYEKSAATGPKLPKLLCIITGKGPL------------KEKYLERIKELKLKKVTIRTP----WLSAEDYPKLLAS 314 (415)
T ss_pred HHHHHHHHHhhcccccCCCEEEEEEecCcc------------HHHHHHHHHHcCCCcEEEEcC----cCCHHHHHHHHHh
Confidence 999999864 247899999999987 678999999999975444556 5678899999995
Q ss_pred cCcEEEEcC---CCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCC---HHH
Q 003987 665 TKGAFVQPA---FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKEN---PSH 738 (781)
Q Consensus 665 aadvfV~PS---~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~d---p~~ 738 (781)
+|++|.|+ ..|+||++++||||||+|||+|+.||..|+|+++.+|++++ |++++|++|..++ +| |+.
T Consensus 315 -aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll----~~~~~~~~ 387 (415)
T cd03816 315 -ADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLL----SNFPNRGK 387 (415)
T ss_pred -CCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHH----hcCCCHHH
Confidence 99999753 35789999999999999999999999999999999999994 8999999998887 67 999
Q ss_pred HHHHHHHHHHHHHHhcCcch
Q 003987 739 WKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 739 ~~~~s~~a~~~~~~~ysw~~ 758 (781)
+++|+++|++.. .++|+.
T Consensus 388 ~~~m~~~~~~~~--~~~~~~ 405 (415)
T cd03816 388 LNSLKKGAQEES--ELRWDE 405 (415)
T ss_pred HHHHHHHHHHhh--hcCHHH
Confidence 999999999988 456654
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-33 Score=296.10 Aligned_cols=373 Identities=22% Similarity=0.327 Sum_probs=269.9
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++... |..||...++. .|++.|.+.||+|. +++.......... ....
T Consensus 1 kI~ii~~~~~---------~~~~G~~~~~~--------~l~~~L~~~g~~v~----i~~~~~~~~~~~~------~~~~- 52 (374)
T cd03801 1 KILLVTPEYP---------PSVGGAERHVL--------ELARALAARGHEVT----VLTPGDGGLPDEE------EVGG- 52 (374)
T ss_pred CeeEEecccC---------CccCcHhHHHH--------HHHHHHHhcCceEE----EEecCCCCCCcee------eecC-
Confidence 6899997654 23689999999 77778889999999 8877643321110 0000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~ 439 (781)
......+... ..........+...+...+. ..+||+||++...........++..++|++++.|+
T Consensus 53 --~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~ 117 (374)
T cd03801 53 --IVVVRPPPLL----------RVRRLLLLLLLALRLRRLLR---RERFDVVHAHDWLALLAAALAARLLGIPLVLTVHG 117 (374)
T ss_pred --cceecCCccc----------ccchhHHHHHHHHHHHHHhh---hcCCcEEEEechhHHHHHHHHHHhcCCcEEEEecc
Confidence 0000000000 00011111122222333333 34899999999887666557788889999999998
Q ss_pred CcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003987 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 440 l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~ 519 (781)
......... .. . ............++.+|.+++.|........+. .+.. ..
T Consensus 118 ~~~~~~~~~---~~-~----~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~~--~~ 168 (374)
T cd03801 118 LEFGRPGNE---LG-L----LLKLARALERRALRRADRIIAVSEATREELREL-------------------GGVP--PE 168 (374)
T ss_pred chhhccccc---hh-H----HHHHHHHHHHHHHHhCCEEEEecHHHHHHHHhc-------------------CCCC--CC
Confidence 765432211 00 0 000111234567889999999998776522211 1111 35
Q ss_pred ceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc
Q 003987 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (781)
++.++|||+|...+.+.. ...+ ...+. ..+++.|+++|++...||++.+++++..+.+
T Consensus 169 ~~~~i~~~~~~~~~~~~~-~~~~-------------------~~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~ 226 (374)
T cd03801 169 KITVIPNGVDTERFRPAP-RAAR-------------------RRLGI--PEDEPVILFVGRLVPRKGVDLLLEALAKLRK 226 (374)
T ss_pred cEEEecCcccccccCccc-hHHH-------------------hhcCC--cCCCeEEEEecchhhhcCHHHHHHHHHHHhh
Confidence 899999999998776543 1110 01111 4567889999999999999999999999988
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCc
Q 003987 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (781)
Q Consensus 600 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 679 (781)
..++++|+++|++.. ...+++++++++..++|.|+| .++.+++..+++. +|++++|+..|++|
T Consensus 227 ~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~di~i~~~~~~~~~ 289 (374)
T cd03801 227 EYPDVRLVIVGDGPL------------REELEALAAELGLGDRVTFLG----FVPDEDLPALYAA-ADVFVLPSLYEGFG 289 (374)
T ss_pred hcCCeEEEEEeCcHH------------HHHHHHHHHHhCCCcceEEEe----ccChhhHHHHHHh-cCEEEecchhcccc
Confidence 778999999997755 677788888889999999999 5667899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 680 ltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
++++|||+||+|||+|+.++..|++.++.+|+++++.|+++++++|.+++ .|++.++++++++++.+.+.|+|+..
T Consensus 290 ~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (374)
T cd03801 290 LVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLL----DDPELRRRLGEAARERVAERFSWDRV 365 (374)
T ss_pred chHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHHHhcCHHHH
Confidence 99999999999999999999999999999999999999999999998877 89999999999999999999999764
Q ss_pred hhccchHHHH
Q 003987 760 GIVDPSPFVI 769 (781)
Q Consensus 760 ~il~~ye~ll 769 (781)
.+.|.+++
T Consensus 366 --~~~~~~~~ 373 (374)
T cd03801 366 --AARTEEVY 373 (374)
T ss_pred --HHHHHHhh
Confidence 34454443
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-33 Score=302.45 Aligned_cols=358 Identities=17% Similarity=0.239 Sum_probs=253.6
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||++++++. ..||.+.++. +|++.|.++||+|+ |++...... .. ....
T Consensus 1 ~il~~~~~~-----------~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~-~~-------~~~~- 48 (360)
T cd04951 1 KILYVITGL-----------GLGGAEKQVV--------DLADQFVAKGHQVA----IISLTGESE-VK-------PPID- 48 (360)
T ss_pred CeEEEecCC-----------CCCCHHHHHH--------HHHHhcccCCceEE----EEEEeCCCC-cc-------chhh-
Confidence 577776542 2589999999 77788899999999 887542111 00 0000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H 438 (781)
......++.... .+.++.. ...+.+.+++ .+||+||+|...+++++.++++.. ++|++++.|
T Consensus 49 -~~~~~~~~~~~~------------~~~~~~~-~~~~~~~~~~---~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h 111 (360)
T cd04951 49 -ATIILNLNMSKN------------PLSFLLA-LWKLRKILRQ---FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAH 111 (360)
T ss_pred -ccceEEeccccc------------chhhHHH-HHHHHHHHHh---cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEee
Confidence 011112222111 1111111 1122333333 489999999988777666665543 678999999
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
+..... .. ..+. .......++.++++|....+...+. .+++ .
T Consensus 112 ~~~~~~------~~------~~~~-----~~~~~~~~~~~~~~s~~~~~~~~~~-------------------~~~~--~ 153 (360)
T cd04951 112 SKNEGG------RL------RMLA-----YRLTDFLSDLTTNVSKEALDYFIAS-------------------KAFN--A 153 (360)
T ss_pred ccCchh------HH------HHHH-----HHHHhhccCceEEEcHHHHHHHHhc-------------------cCCC--c
Confidence 753211 00 0011 1123345777788787654421111 1122 5
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+||||+|...|.+........ ++.+++ ++++++++++||+.+.||++.+++++.++.
T Consensus 154 ~~~~~i~ng~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~~l~~g~~~~~kg~~~li~a~~~l~ 214 (360)
T cd04951 154 NKSFVVYNGIDTDRFRKDPARRLKI-----------------RNALGV--KNDTFVILAVGRLVEAKDYPNLLKAFAKLL 214 (360)
T ss_pred ccEEEEccccchhhcCcchHHHHHH-----------------HHHcCc--CCCCEEEEEEeeCchhcCcHHHHHHHHHHH
Confidence 7899999999988776654332221 133555 567789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
+..++++|+|+|+|+. .+.+++.++++++.++|.|+|.+ +++..+++. +|++|+||..|+|
T Consensus 215 ~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-ad~~v~~s~~e~~ 275 (360)
T cd04951 215 SDYLDIKLLIAGDGPL------------RATLERLIKALGLSNRVKLLGLR------DDIAAYYNA-ADLFVLSSAWEGF 275 (360)
T ss_pred hhCCCeEEEEEcCCCc------------HHHHHHHHHhcCCCCcEEEeccc------ccHHHHHHh-hceEEecccccCC
Confidence 8778999999999976 56788888889998999999943 357888885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcch
Q 003987 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 679 GltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~ 758 (781)
|++++|||+||+|||+++.|+..|++++ +|+.++++|+++++++|.++++ .+++.++.++++ ++.+.++|||+.
T Consensus 276 ~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~---~~~~~~~~~~~~-~~~~~~~~s~~~ 349 (360)
T cd04951 276 GLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILK---MSGEERDIIGAR-RERIVKKFSINS 349 (360)
T ss_pred ChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHh---CCHHHHHHHHHH-HHHHHHhcCHHH
Confidence 9999999999999999999999999976 7999999999999999988873 577777778777 888999999964
Q ss_pred hhhccchHHHHH
Q 003987 759 DGIVDPSPFVIN 770 (781)
Q Consensus 759 ~~il~~ye~ll~ 770 (781)
+++.|++++.
T Consensus 350 --~~~~~~~~y~ 359 (360)
T cd04951 350 --IVQQWLTLYT 359 (360)
T ss_pred --HHHHHHHHhh
Confidence 5577777763
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=299.79 Aligned_cols=357 Identities=16% Similarity=0.176 Sum_probs=248.9
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+||++.. |..||.+.++. +|+++|.+.||+|+ +++............ ..
T Consensus 1 kI~~v~~~~----------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~-------~~ 51 (366)
T cd03822 1 RIALVSPYP----------PRKCGIATFTT--------DLVNALSARGPDVL----VVSVAALYPSLLYGG-------EQ 51 (366)
T ss_pred CeEEecCCC----------CCCCcHHHHHH--------HHHHHhhhcCCeEE----EEEeecccCcccCCC-------cc
Confidence 799998642 45799999999 77778899999999 776553321111000 00
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc---h---HHHHHHHHHcCCcE
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG---N---LVASLLAYKMGITQ 433 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~---~---lva~llar~~gvp~ 433 (781)
....... ......+ ..+.+.+. ..+||+||++.+.+ . .......+..++|+
T Consensus 52 ~~~~~~~---------------~~~~~~~-----~~~~~~~~---~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (366)
T cd03822 52 EVVRVIV---------------LDNPLDY-----RRAARAIR---LSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPV 108 (366)
T ss_pred cceeeee---------------cCCchhH-----HHHHHHHh---hcCCCEEEEeeccccccchhhHHHHHHHhhcCCCE
Confidence 0000000 0001111 12223333 34899999887432 1 22222234589999
Q ss_pred EEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeecc
Q 003987 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHG 513 (781)
Q Consensus 434 v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~g 513 (781)
+++.|+..... . .+ . ........++.+|.|+++|..... +. +
T Consensus 109 i~~~h~~~~~~-~----~~-----~-----~~~~~~~~~~~~d~ii~~s~~~~~---~~---------------~----- 150 (366)
T cd03822 109 VVTLHTVLLHE-P----RP-----G-----DRALLRLLLRRADAVIVMSSELLR---AL---------------L----- 150 (366)
T ss_pred EEEEecCCccc-c----ch-----h-----hhHHHHHHHhcCCEEEEeeHHHHH---HH---------------H-----
Confidence 99999861110 0 00 0 001234567899999999733322 11 0
Q ss_pred CCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHH
Q 003987 514 IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVEC 593 (781)
Q Consensus 514 i~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA 593 (781)
...+..++.+||||+|...+.+...... .+. ..++++|+++||+.+.||++.+++|
T Consensus 151 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~----------------------~~~--~~~~~~i~~~G~~~~~K~~~~ll~a 206 (366)
T cd03822 151 LRAYPEKIAVIPHGVPDPPAEPPESLKA----------------------LGG--LDGRPVLLTFGLLRPYKGLELLLEA 206 (366)
T ss_pred hhcCCCcEEEeCCCCcCcccCCchhhHh----------------------hcC--CCCCeEEEEEeeccCCCCHHHHHHH
Confidence 0111469999999999876654332110 111 4567899999999999999999999
Q ss_pred HHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC
Q 003987 594 YGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA 673 (781)
Q Consensus 594 ~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS 673 (781)
+.++.+..++++|+|+|++..... .......++++++++.++|.|+|. .++.+++..+++. +|++++||
T Consensus 207 ~~~~~~~~~~~~l~i~G~~~~~~~-------~~~~~~~~~i~~~~~~~~v~~~~~---~~~~~~~~~~~~~-ad~~v~ps 275 (366)
T cd03822 207 LPLLVAKHPDVRLLVAGETHPDLE-------RYRGEAYALAERLGLADRVIFINR---YLPDEELPELFSA-ADVVVLPY 275 (366)
T ss_pred HHHHHhhCCCeEEEEeccCccchh-------hhhhhhHhHHHhcCCCCcEEEecC---cCCHHHHHHHHhh-cCEEEecc
Confidence 999988888999999999865100 001111145788899999999982 3778899999996 99999999
Q ss_pred CCC--CCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 003987 674 FYE--AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (781)
Q Consensus 674 ~~E--~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~ 751 (781)
.+| +||++++|||+||+|||+|+.|| .+.+.++.+|++++++|+++++++|.+++ +|++.+.+|++++++.+.
T Consensus 276 ~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~----~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 276 RSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLL----ADPELAQALRARAREYAR 350 (366)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHh
Confidence 999 99999999999999999999999 77778888999999999999999998887 899999999999999996
Q ss_pred HhcCcchhhhccchHHHH
Q 003987 752 ERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 752 ~~ysw~~~~il~~ye~ll 769 (781)
+ |||+. +++.|.+++
T Consensus 351 ~-~s~~~--~~~~~~~~~ 365 (366)
T cd03822 351 A-MSWER--VAERYLRLL 365 (366)
T ss_pred h-CCHHH--HHHHHHHHh
Confidence 6 99965 445666554
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-34 Score=313.67 Aligned_cols=347 Identities=15% Similarity=0.180 Sum_probs=236.1
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHC--CCceeecceEEEccCCCCCCCccCcceeee
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ--GLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~--GheV~~~v~VvT~~~p~~~~~~~~~~~e~v 356 (781)
|||+++++. + |..||++.++. ++++.|.++ ||+|. ++++..+... ......
T Consensus 1 mkI~~~~~~-~---------~~~GG~e~~~~--------~l~~~L~~~~~g~~v~----v~~~~~~~~~-----~~~~~~ 53 (359)
T PRK09922 1 MKIAFIGEA-V---------SGFGGMETVIS--------NVINTFEESKINCEMF----FFCRNDKMDK-----AWLKEI 53 (359)
T ss_pred CeeEEeccc-c---------cCCCchhHHHH--------HHHHHhhhcCcceeEE----EEecCCCCCh-----HHHHhc
Confidence 799999863 3 34699999999 777778999 77777 7776533110 000000
Q ss_pred cCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE--E
Q 003987 357 SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ--C 434 (781)
Q Consensus 357 ~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~--v 434 (781)
.-.......++++.. .. .....+.+.+.+ .+||+||+|.......+.++++..++|. +
T Consensus 54 ~~~~~~~~~~~~~~~----------~~-------~~~~~l~~~l~~---~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (359)
T PRK09922 54 KYAQSFSNIKLSFLR----------RA-------KHVYNFSKWLKE---TQPDIVICIDVISCLYANKARKKSGKQFKIF 113 (359)
T ss_pred chhcccccchhhhhc----------cc-------HHHHHHHHHHHh---cCCCEEEEcCHHHHHHHHHHHHHhCCCCeEE
Confidence 000000000111000 00 111223333433 4899999998766677777777777654 4
Q ss_pred EEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccC
Q 003987 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (781)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi 514 (781)
.+.|...... ..+. ...+..+|.++++|....+.+. ..|+
T Consensus 114 ~~~h~~~~~~------------~~~~--------~~~~~~~d~~i~~S~~~~~~~~--------------------~~~~ 153 (359)
T PRK09922 114 SWPHFSLDHK------------KHAE--------CKKITCADYHLAISSGIKEQMM--------------------ARGI 153 (359)
T ss_pred EEecCccccc------------chhh--------hhhhhcCCEEEEcCHHHHHHHH--------------------HcCC
Confidence 4455321100 0000 0123689999999987654211 1233
Q ss_pred CCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeecc--CCCChHHHHH
Q 003987 515 DVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD--HVKNMTGLVE 592 (781)
Q Consensus 515 ~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~--~~Kgl~~Lie 592 (781)
+ ..++.+||||+|.+.+..... ...++++|+++||+. +.||+..+++
T Consensus 154 ~--~~ki~vi~N~id~~~~~~~~~-----------------------------~~~~~~~i~~~Grl~~~~~k~~~~l~~ 202 (359)
T PRK09922 154 S--AQRISVIYNPVEIKTIIIPPP-----------------------------ERDKPAVFLYVGRLKFEGQKNVKELFD 202 (359)
T ss_pred C--HHHEEEEcCCCCHHHccCCCc-----------------------------ccCCCcEEEEEEEEecccCcCHHHHHH
Confidence 3 568999999999654322110 023467899999996 4699999999
Q ss_pred HHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEc
Q 003987 593 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP 672 (781)
Q Consensus 593 A~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~P 672 (781)
++.++.. +++|+|+|+|++ .+.++++++++++.++|.|+|++.+ +.+++..+++. +|++|+|
T Consensus 203 a~~~~~~---~~~l~ivG~g~~------------~~~l~~~~~~~~l~~~v~f~G~~~~--~~~~~~~~~~~-~d~~v~~ 264 (359)
T PRK09922 203 GLSQTTG---EWQLHIIGDGSD------------FEKCKAYSRELGIEQRIIWHGWQSQ--PWEVVQQKIKN-VSALLLT 264 (359)
T ss_pred HHHhhCC---CeEEEEEeCCcc------------HHHHHHHHHHcCCCCeEEEecccCC--cHHHHHHHHhc-CcEEEEC
Confidence 9988743 799999999977 6778999999999999999997653 35678888885 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHH--HHHHHHHHHHH
Q 003987 673 AFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSH--WKKISDGGLKR 749 (781)
Q Consensus 673 S~~E~fGltvlEAMa~GlPVVaT~-~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~--~~~~s~~a~~~ 749 (781)
|.+|+||++++||||||+|||+|+ .||+.|+|.++.+|++++++|+++++++|.+++ +|++. ...+++++++.
T Consensus 265 s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~ 340 (359)
T PRK09922 265 SKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVI----SGEVKYQHDAIPNSIERF 340 (359)
T ss_pred CcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHH----hCcccCCHHHHHHHHHHh
Confidence 999999999999999999999999 999999999999999999999999999999887 77763 44445555444
Q ss_pred HHHhcCcchhhhccchHHH
Q 003987 750 IYERLVVSSDGIVDPSPFV 768 (781)
Q Consensus 750 ~~~~ysw~~~~il~~ye~l 768 (781)
..++|.- .+++.|+.+
T Consensus 341 ~~~~~~~---~~~~~~~~~ 356 (359)
T PRK09922 341 YEVLYFK---NLNNALFSK 356 (359)
T ss_pred hHHHHHH---HHHHHHHHH
Confidence 4443321 444555544
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=327.79 Aligned_cols=291 Identities=18% Similarity=0.261 Sum_probs=229.2
Q ss_pred CCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCcccCC----CCChhhHhhhhcc-ccchhhhhHHHHHHhhCCEEE
Q 003987 406 GFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKY----PDSDIYWKKFDEK-YHFSCQFTADLIAMNNADFII 479 (781)
Q Consensus 406 ~kpDIIh~~~~~-~~lva~llar~~gvp~v~t~H~l~~~k~----~~s~~~~k~~~~~-y~f~~~~~~e~~a~~~AD~II 479 (781)
.++|+||+|... .++++.++++..|+|+++|.|+...... .........+... .++.. ..+..+++.||.|+
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~ad~Ii 249 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYFRRLWIRFFE--SLGRLAYQAADRIT 249 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHHHHHHHHHHH--HHHHHHHHhCCEEE
Confidence 478999999754 4688888999999999999998643110 0000000000000 11111 23556889999999
Q ss_pred ecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccc
Q 003987 480 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 559 (781)
Q Consensus 480 t~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~ 559 (781)
++|....... ...|++ ..|+.|||||+|.+.|.+....
T Consensus 250 ~~s~~~~~~~--------------------~~~g~~--~~ki~vIpNgid~~~f~~~~~~-------------------- 287 (475)
T cd03813 250 TLYEGNRERQ--------------------IEDGAD--PEKIRVIPNGIDPERFAPARRA-------------------- 287 (475)
T ss_pred ecCHHHHHHH--------------------HHcCCC--HHHeEEeCCCcCHHHcCCcccc--------------------
Confidence 9998764411 011333 6799999999999887664321
Q ss_pred cccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC
Q 003987 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 639 (781)
Q Consensus 560 ~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL 639 (781)
+. ++++++|+++||+.+.||++.+++|++.+.+..|+++|+|+|+++. +.++.++++++++++++
T Consensus 288 -----~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~--------~~~~~~e~~~li~~l~l 352 (475)
T cd03813 288 -----RP--EKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDE--------DPEYAEECRELVESLGL 352 (475)
T ss_pred -----cc--CCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCc--------ChHHHHHHHHHHHHhCC
Confidence 00 3567899999999999999999999999988889999999999853 12456788999999999
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc------CCeEEEE
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH------GASGFHI 713 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d------g~~G~lv 713 (781)
.++|+|+| ..++..+++. +|++|+||..|+||++++||||||+|||+|+.||..|++.+ |.+|+++
T Consensus 353 ~~~V~f~G-------~~~v~~~l~~-aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv 424 (475)
T cd03813 353 EDNVKFTG-------FQNVKEYLPK-LDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVV 424 (475)
T ss_pred CCeEEEcC-------CccHHHHHHh-CCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEE
Confidence 99999999 1356778884 99999999999999999999999999999999999999998 6799999
Q ss_pred CCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 714 DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 714 ~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
++.|+++++++|.+++ .|++.+++++++|++++.+.|+|++ +++.|.+++
T Consensus 425 ~~~d~~~la~ai~~ll----~~~~~~~~~~~~a~~~v~~~~s~~~--~~~~y~~lY 474 (475)
T cd03813 425 PPADPEALARAILRLL----KDPELRRAMGEAGRKRVERYYTLER--MIDSYRRLY 474 (475)
T ss_pred CCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHHhCCHHH--HHHHHHHHh
Confidence 9999999999998887 8999999999999999999999965 556777665
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=300.04 Aligned_cols=362 Identities=17% Similarity=0.182 Sum_probs=263.0
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++... .||.+.++. .|++.|.+.|++|. +++....... ..... .
T Consensus 1 ~i~~i~~~~~-----------~gG~~~~~~--------~l~~~l~~~~~~v~----~~~~~~~~~~----~~~~~----~ 49 (365)
T cd03807 1 KVLHVITGLD-----------VGGAERMLV--------RLLKGLDRDRFEHV----VISLTDRGEL----GEELE----E 49 (365)
T ss_pred CeEEEEeecc-----------CccHHHHHH--------HHHHHhhhccceEE----EEecCcchhh----hHHHH----h
Confidence 5788875432 389999999 77788899999999 8775432211 11111 1
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~-~gvp~v~t~H 438 (781)
.++.+..++.... ...+ .+...+.+.+.. .+||+||++.......+...++. .+++++.+.|
T Consensus 50 ~~i~v~~~~~~~~----------~~~~----~~~~~~~~~~~~---~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (365)
T cd03807 50 AGVPVYCLGKRPG----------RPDP----GALLRLYKLIRR---LRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIR 112 (365)
T ss_pred cCCeEEEEecccc----------cccH----HHHHHHHHHHHh---hCCCEEEeccccccHHHHHHHHhcCCCcEEEEec
Confidence 2456666554431 0111 112233333433 38999999987777776666666 6899999999
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
....... .+. ...+. .......+.+|.++++|......... .|++ .
T Consensus 113 ~~~~~~~-----~~~--~~~~~-----~~~~~~~~~~~~~i~~s~~~~~~~~~--------------------~~~~--~ 158 (365)
T cd03807 113 HSDLDLG-----KKS--TRLVA-----RLRRLLSSFIPLIVANSAAAAEYHQA--------------------IGYP--P 158 (365)
T ss_pred CCccccc-----chh--HhHHH-----HHHHHhccccCeEEeccHHHHHHHHH--------------------cCCC--h
Confidence 8654321 010 11111 12334667889999999876542111 1232 5
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.++|||+|...+.+........ ++++++ ++++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~l~ 219 (365)
T cd03807 159 KKIVVIPNGVDTERFSPDLDARARL-----------------REELGL--PEDTFLIGIVARLHPQKDHATLLRAAALLL 219 (365)
T ss_pred hheeEeCCCcCHHhcCCcccchHHH-----------------HHhcCC--CCCCeEEEEecccchhcCHHHHHHHHHHHH
Confidence 6899999999988776654332211 123555 567788999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH-HcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK-TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~-elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 677 (781)
+..++++|+|+|.++. ......... ++++.++|.|+|.+ +++..+++. +|++++||..|+
T Consensus 220 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-adi~v~ps~~e~ 280 (365)
T cd03807 220 KKFPNARLLLVGDGPD------------RANLELLALKELGLEDKVILLGER------SDVPALLNA-LDVFVLSSLSEG 280 (365)
T ss_pred HhCCCeEEEEecCCcc------------hhHHHHHHHHhcCCCceEEEcccc------ccHHHHHHh-CCEEEeCCcccc
Confidence 8788999999999876 334444554 78899999999942 467888885 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003987 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 678 fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~ 757 (781)
||++++|||+||+|||+|+.||..|++.+ +|++++++|+++++++|.+++ +|++.+.++++++++.+.++|||+
T Consensus 281 ~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 354 (365)
T cd03807 281 FPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALL----ADPALRQALGEAARERIEENFSIE 354 (365)
T ss_pred CCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHH----hChHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999999999999999999999977 899999999999999998887 789999999999999999999996
Q ss_pred hhhhccchHHHH
Q 003987 758 SDGIVDPSPFVI 769 (781)
Q Consensus 758 ~~~il~~ye~ll 769 (781)
. +++.|.+++
T Consensus 355 ~--~~~~~~~~y 364 (365)
T cd03807 355 A--MVEAYEELY 364 (365)
T ss_pred H--HHHHHHHHh
Confidence 5 456666654
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=312.21 Aligned_cols=369 Identities=13% Similarity=0.082 Sum_probs=239.4
Q ss_pred CceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCC-CceeecceEEEccCCCCCCC-------c
Q 003987 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQG-LDISPKILIVTRLIPDAKGT-------T 348 (781)
Q Consensus 277 ~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~G-heV~~~v~VvT~~~p~~~~~-------~ 348 (781)
+.|||+|+|.-.. |..+|+.+.++ .++..|.++| |+|+ |+++..+..... .
T Consensus 3 ~~mrIaivTdt~l---------P~vnGva~s~~--------~~a~~L~~~G~heV~----vvaP~~~~~~~~~~~~~~~~ 61 (462)
T PLN02846 3 KKQHIAIFTTASL---------PWMTGTAVNPL--------FRAAYLAKDGDREVT----LVIPWLSLKDQKLVYPNKIT 61 (462)
T ss_pred CCCEEEEEEcCCC---------CCCCCeeccHH--------HHHHHHHhcCCcEEE----EEecCCcccccccccccccc
Confidence 3589999997554 78999999999 7777899999 7999 998765432110 0
Q ss_pred cCcc---eeeecCCCCeEEEEeccCCCcccccccccc--cCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHH-
Q 003987 349 CNQR---LERVSGTEHTHILRVPFRSEKGILRQWISR--FDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLV- 421 (781)
Q Consensus 349 ~~~~---~e~v~~~~~~~I~rvp~~~~~~~~~~~isr--~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~-~lv- 421 (781)
+... ...+....+.+|.++|..+... .+.+.+. ..+++ ..++.+.+.+. +|||||.+.+.. ++.
T Consensus 62 f~~~~~~e~~~~~~~~~~v~r~~s~~~p~-yp~r~~~~~r~~~~-----~~~i~~~l~~~---~pDVIHv~tP~~LG~~~ 132 (462)
T PLN02846 62 FSSPSEQEAYVRQWLEERISFLPKFSIKF-YPGKFSTDKRSILP-----VGDISETIPDE---EADIAVLEEPEHLTWYH 132 (462)
T ss_pred ccCchhhhhhhhhhccCeEEEeccccccc-CcccccccccccCC-----hHHHHHHHHhc---CCCEEEEcCchhhhhHH
Confidence 0000 0011111123555655433211 0000100 01111 22444555443 899999999886 555
Q ss_pred -HHHHHHHcCCcEEEEecCCcccCCCCC-h--hhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccc
Q 003987 422 -ASLLAYKMGITQCTIAHALEKTKYPDS-D--IYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYE 497 (781)
Q Consensus 422 -a~llar~~gvp~v~t~H~l~~~k~~~s-~--~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qye 497 (781)
|..+++++++ +|.++|+... .|... . ..... ..+++.++ ..-..+|.+++.|..... +
T Consensus 133 ~g~~~~~k~~~-vV~tyHT~y~-~Y~~~~~~g~~~~~---l~~~~~~~----~~r~~~d~vi~pS~~~~~--------l- 194 (462)
T PLN02846 133 HGKRWKTKFRL-VIGIVHTNYL-EYVKREKNGRVKAF---LLKYINSW----VVDIYCHKVIRLSAATQD--------Y- 194 (462)
T ss_pred HHHHHHhcCCc-EEEEECCChH-HHHHHhccchHHHH---HHHHHHHH----HHHHhcCEEEccCHHHHH--------H-
Confidence 6667777766 8889998321 11100 0 00000 01111111 111348999999974422 0
Q ss_pred cccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEE
Q 003987 498 SHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFS 577 (781)
Q Consensus 498 s~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~ 577 (781)
.....+.++|||.+.|.|....... ..+ ..+.-.++++|
T Consensus 195 --------------------~~~~i~~v~GVd~~~f~~~~~~~~~--------------------~~~-~~~~~~~~~l~ 233 (462)
T PLN02846 195 --------------------PRSIICNVHGVNPKFLEIGKLKLEQ--------------------QKN-GEQAFTKGAYY 233 (462)
T ss_pred --------------------hhCEEecCceechhhcCCCcccHhh--------------------hcC-CCCCcceEEEE
Confidence 1123334589999988775432111 011 00112357899
Q ss_pred EeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHH
Q 003987 578 MARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGE 657 (781)
Q Consensus 578 vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~e 657 (781)
+|||.+.||++.|++|++++.+..++++|+|+|+|++ .++++++++++++..++ |.|. ...+
T Consensus 234 vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~------------~~~L~~~a~~l~l~~~v-f~G~----~~~~- 295 (462)
T PLN02846 234 IGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED------------SDEVKAAAEKLELDVRV-YPGR----DHAD- 295 (462)
T ss_pred EecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc------------HHHHHHHHHhcCCcEEE-ECCC----CCHH-
Confidence 9999999999999999999987778999999999988 77899999999987554 7773 2333
Q ss_pred HHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHH
Q 003987 658 LYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS 737 (781)
Q Consensus 658 l~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~ 737 (781)
.+++ ++|+||+||.+|+||++++||||||+|||+++.++ .+++.++.+|+.++ |.++++++|..++. .++
T Consensus 296 --~~~~-~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~---~~~- 365 (462)
T PLN02846 296 --PLFH-DYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALA---EEP- 365 (462)
T ss_pred --HHHH-hCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHc---cCc-
Confidence 4555 58999999999999999999999999999999998 59999999999995 89999999998873 233
Q ss_pred HHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 738 HWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 738 ~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
..++.+++ +.|||+ +..+.|.+++.
T Consensus 366 --~~~~~~a~----~~~SWe--~~~~~l~~~~~ 390 (462)
T PLN02846 366 --APLTDAQR----HELSWE--AATERFLRVAD 390 (462)
T ss_pred --hhHHHHHH----HhCCHH--HHHHHHHHHhc
Confidence 23333332 589995 45677777764
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=314.67 Aligned_cols=371 Identities=18% Similarity=0.201 Sum_probs=246.6
Q ss_pred EEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHC--CCceeecceEEEccCCCCCCC------ccCcc
Q 003987 281 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQ--GLDISPKILIVTRLIPDAKGT------TCNQR 352 (781)
Q Consensus 281 I~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~--GheV~~~v~VvT~~~p~~~~~------~~~~~ 352 (781)
|+++.|+.- ..||.++.+++-|++| .++ ||+|+ |+|......... .|- .
T Consensus 3 ~~f~hp~~~----------~ggg~ervl~~a~~~l--------~~~~~~~~v~----i~t~~~~~~~~~~l~~~~~~f-~ 59 (419)
T cd03806 3 VGFFHPYCN----------AGGGGERVLWCAVRAL--------QKRYPNNIVV----IYTGDLDATPEEILEKVESRF-N 59 (419)
T ss_pred EEEECCCCC----------CCCCchHHHHHHHHHH--------HHhCCCcEEE----EECCCCCCCHHHHHHHHHHhc-C
Confidence 677765442 3469999999777665 445 88998 999885442100 010 1
Q ss_pred eeeecCCCCeEEEEec-cCCCcccccccccccCchhh---HHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHH
Q 003987 353 LERVSGTEHTHILRVP-FRSEKGILRQWISRFDVWPY---LETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLA 426 (781)
Q Consensus 353 ~e~v~~~~~~~I~rvp-~~~~~~~~~~~isr~~i~~y---l~~f~~~~~~~i~~~~~~kpDIIh~~~~~~--~lva~lla 426 (781)
.+. . .+..++++. .+. |+++ ..|+. +-.+...+...+......+||||+.+...+ ..++.
T Consensus 60 ~~~-~--~~~~~~~~~~~~~-------~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~--- 125 (419)
T cd03806 60 IEL-D--RPRIVFFLLKYRK-------LVEA-STYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVR--- 125 (419)
T ss_pred eec-C--CCceEEEEeccee-------eecc-ccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHH---
Confidence 111 1 234444442 111 2222 12222 122333333333333244899999886443 22222
Q ss_pred HHcCCcEEEEecCCcccCCCCCh--h-------------hHh----hhhccccchhhhhHHHHHHhhCCEEEecCHHHHh
Q 003987 427 YKMGITQCTIAHALEKTKYPDSD--I-------------YWK----KFDEKYHFSCQFTADLIAMNNADFIITSTYQEIA 487 (781)
Q Consensus 427 r~~gvp~v~t~H~l~~~k~~~s~--~-------------~~k----~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~ 487 (781)
...++|++..+| ++..-.+.- . ..+ .....|+.. ....+...++.||.||++|....+
T Consensus 126 ~~~~~~~i~y~h--~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~-~~~~~~~~~~~aD~ii~~S~~~~~ 202 (419)
T cd03806 126 LLGGCPVGAYVH--YPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRL-FAFLYGLAGSFADVVMVNSTWTRN 202 (419)
T ss_pred HhcCCeEEEEec--CCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHH-HHHHHHHHhhcCCEEEECCHHHHH
Confidence 224889999999 331000000 0 000 000011100 112466788999999999987655
Q ss_pred hccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCC
Q 003987 488 GTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTL 567 (781)
Q Consensus 488 ~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l 567 (781)
.+++.. +. ..++.||+||+|.+.|.+.... .
T Consensus 203 ~~~~~~-------------------~~---~~~~~vi~~gvd~~~~~~~~~~--------------------------~- 233 (419)
T cd03806 203 HIRSLW-------------------KR---NTKPSIVYPPCDVEELLKLPLD--------------------------E- 233 (419)
T ss_pred HHHHHh-------------------Cc---CCCcEEEcCCCCHHHhcccccc--------------------------c-
Confidence 322210 11 2488999999998766543210 0
Q ss_pred CCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC-----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003987 568 SDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE-----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (781)
Q Consensus 568 ~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~-----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~ 642 (781)
..++++|+|+||+.+.||++.+++|++++.+..+ +++|+|+|++... ++.++.+.++++++++++.++
T Consensus 234 -~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~------~~~~~~~~L~~~~~~l~l~~~ 306 (419)
T cd03806 234 -KTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE------DDEKRVEDLKLLAKELGLEDK 306 (419)
T ss_pred -ccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc------ccHHHHHHHHHHHHHhCCCCe
Confidence 2456789999999999999999999999987654 4999999998651 223467789999999999999
Q ss_pred EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc-ccccc---cCCeEEEECCCCH
Q 003987 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP-AEIIE---HGASGFHIDPYHP 718 (781)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~-~EiI~---dg~~G~lv~p~d~ 718 (781)
|.|+| .++.+++..+|+. +|++|+|+..|+||++++||||||+|||+++.||+ .|++. ++.+|++++ |+
T Consensus 307 V~f~g----~v~~~~l~~~l~~-adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~ 379 (419)
T cd03806 307 VEFVV----NAPFEELLEELST-ASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TA 379 (419)
T ss_pred EEEec----CCCHHHHHHHHHh-CeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CH
Confidence 99999 6788999999995 99999999999999999999999999999999886 47887 899999985 99
Q ss_pred HHHHHHHHHHHHhccCC-HHHHHHHHHHHHHHHHHhcCcchh
Q 003987 719 DQAAELMADFFGKCKEN-PSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 719 ~~lA~~I~~~l~~l~~d-p~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
+++|++|.+++ ++ ++.++.+ .++++++.++|||+++
T Consensus 380 ~~la~ai~~ll----~~~~~~~~~~-~~~~~~~~~~fs~~~f 416 (419)
T cd03806 380 EEYAEAIEKIL----SLSEEERLRI-RRAARSSVKRFSDEEF 416 (419)
T ss_pred HHHHHHHHHHH----hCCHHHHHHH-HHHHHHHHHhhCHHHh
Confidence 99999999888 54 4455555 5555667799999875
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=290.58 Aligned_cols=345 Identities=17% Similarity=0.246 Sum_probs=249.5
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||++++++.. + .||...++. +|+++|.++||+|+ +++....... .. ...
T Consensus 1 kI~i~~~~~~---------~-~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~------~~---~~~ 49 (348)
T cd03820 1 KILFVIPSLG---------N-AGGAERVLS--------NLANALAEKGHEVT----IISLDKGEPP------FY---ELD 49 (348)
T ss_pred CeEEEecccc---------C-CCChHHHHH--------HHHHHHHhCCCeEE----EEecCCCCCC------cc---ccC
Confidence 6888986544 2 689999998 77778899999999 8876643300 00 011
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcC-CcEEEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMG-ITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~g-vp~v~t~H 438 (781)
.++.+..++...... .+.+. .+...+.+.+. ..+||+||+++.. ....+.....+ +|++.+.|
T Consensus 50 ~~~~~~~~~~~~~~~----------~~~~~-~~~~~~~~~l~---~~~~d~i~~~~~~--~~~~~~~~~~~~~~~i~~~~ 113 (348)
T cd03820 50 PKIKVIDLGDKRDSK----------LLARF-KKLRRLRKLLK---NNKPDVVISFLTS--LLTFLASLGLKIVKLIVSEH 113 (348)
T ss_pred Cccceeecccccccc----------hhccc-cchHHHHHhhc---ccCCCEEEEcCch--HHHHHHHHhhccccEEEecC
Confidence 234555554432110 00000 11112222332 2499999999877 22233333445 49999999
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
+....... ...+. ......++.+|.+++.|...... + .....
T Consensus 114 ~~~~~~~~--~~~~~------------~~~~~~~~~~d~ii~~s~~~~~~-------~-----------------~~~~~ 155 (348)
T cd03820 114 NSPDAYKK--RLRRL------------LLRRLLYRRADAVVVLTEEDRAL-------Y-----------------YKKFN 155 (348)
T ss_pred CCccchhh--hhHHH------------HHHHHHHhcCCEEEEeCHHHHHH-------h-----------------hccCC
Confidence 75432110 00000 02456788999999999876310 0 01225
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.++|||+|...+.+. ...+++.++++|++.+.||++.+++++.++.
T Consensus 156 ~~~~vi~~~~~~~~~~~~-------------------------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~ 204 (348)
T cd03820 156 KNVVVIPNPLPFPPEEPS-------------------------------SDLKSKRILAVGRLVPQKGFDLLIEAWAKIA 204 (348)
T ss_pred CCeEEecCCcChhhcccc-------------------------------CCCCCcEEEEEEeeccccCHHHHHHHHHHHH
Confidence 789999999998654332 0345778999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
+..++++|+|+|++.. ...+.++++++++.++|.+.|. .+++..+++. +|++++||.+|+|
T Consensus 205 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-ad~~i~ps~~e~~ 265 (348)
T cd03820 205 KKHPDWKLRIVGDGPE------------REALEALIKELGLEDRVILLGF------TKNIEEYYAK-ASIFVLTSRFEGF 265 (348)
T ss_pred hcCCCeEEEEEeCCCC------------HHHHHHHHHHcCCCCeEEEcCC------cchHHHHHHh-CCEEEeCcccccc
Confidence 8889999999999876 5667778899999999999994 4688899995 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCcc-ccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003987 679 GLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 679 GltvlEAMa~GlPVVaT~~g-G~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~ 757 (781)
|++++|||+||+|||+|+.+ +..+++.++.+|+++++.|+++++++|.+++ .||+.+++|++++++.+ ++|+|+
T Consensus 266 ~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~ 340 (348)
T cd03820 266 PMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLM----EDEELRKRMGANARESA-ERFSIE 340 (348)
T ss_pred CHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-HHhCHH
Confidence 99999999999999999865 5677888778999999999999999998887 89999999999996655 889996
Q ss_pred hhhhccchH
Q 003987 758 SDGIVDPSP 766 (781)
Q Consensus 758 ~~~il~~ye 766 (781)
+ +++.|+
T Consensus 341 ~--~~~~~~ 347 (348)
T cd03820 341 N--IIKQWE 347 (348)
T ss_pred H--HHHHhc
Confidence 5 444443
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=300.07 Aligned_cols=342 Identities=17% Similarity=0.201 Sum_probs=243.1
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~ 358 (781)
|||++++... ..||.++++. .+++.|.++||+|+ +++....
T Consensus 1 MkIl~~~~~~-----------~~gG~~~~~~--------~l~~~l~~~G~~v~----v~~~~~~---------------- 41 (365)
T cd03825 1 MKVLHLNTSD-----------ISGGAARAAY--------RLHRALQAAGVDST----MLVQEKK---------------- 41 (365)
T ss_pred CeEEEEecCC-----------CCCcHHHHHH--------HHHHHHHhcCCcee----EEEeecc----------------
Confidence 7999998532 2589999999 67777899999999 8864411
Q ss_pred CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc--CCcEEEE
Q 003987 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM--GITQCTI 436 (781)
Q Consensus 359 ~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~--gvp~v~t 436 (781)
. +.+.+. ..+|||||.|+.....+......+. ++|.|++
T Consensus 42 ------------~------------------------~~~~~~---~~~~diih~~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (365)
T cd03825 42 ------------A------------------------LISKIE---IINADIVHLHWIHGGFLSIEDLSKLLDRKPVVWT 82 (365)
T ss_pred ------------h------------------------hhhChh---cccCCEEEEEccccCccCHHHHHHHHcCCCEEEE
Confidence 0 001111 2389999999876654444444444 9999999
Q ss_pred ecCCcccCCC----CC-hhhHhh-----hhcccc---chhhhh-H-HHHHHhhCCEEEecCHHHHhhccccccccccccc
Q 003987 437 AHALEKTKYP----DS-DIYWKK-----FDEKYH---FSCQFT-A-DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTA 501 (781)
Q Consensus 437 ~H~l~~~k~~----~s-~~~~k~-----~~~~y~---f~~~~~-~-e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~ 501 (781)
+|+....... .. ..++.. ....+. +..+.. . .......++.++++|....+...+.
T Consensus 83 ~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~~~~~~~~--------- 153 (365)
T cd03825 83 LHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAPSRWLADCARSS--------- 153 (365)
T ss_pred cccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEehhHHHHHHHHhc---------
Confidence 9986543210 00 000000 000000 011110 0 1112245677888886554421111
Q ss_pred cccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeec
Q 003987 502 FTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL 581 (781)
Q Consensus 502 f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL 581 (781)
......++.++|||+|.+.|.|......+ ..+++ +++++++++.|+.
T Consensus 154 ------------~~~~~~~~~vi~ngi~~~~~~~~~~~~~~-------------------~~~~~--~~~~~~i~~~~~~ 200 (365)
T cd03825 154 ------------SLFKGIPIEVIPNGIDTTIFRPRDKREAR-------------------KRLGL--PADKKIILFGAVG 200 (365)
T ss_pred ------------cccCCCceEEeCCCCcccccCCCcHHHHH-------------------HHhCC--CCCCeEEEEEecC
Confidence 11225799999999999988765443221 22444 4566777777777
Q ss_pred cC--CCChHHHHHHHHHhhcc-CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCC-hHH
Q 003987 582 DH--VKNMTGLVECYGKNSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRAR-NGE 657 (781)
Q Consensus 582 ~~--~Kgl~~LieA~~~l~~~-~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~-~~e 657 (781)
.. .||++.++++++.+.+. .+++.++++|++... .. .++..+|.|+|+ ++ .++
T Consensus 201 ~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~------------~~-------~~~~~~v~~~g~----~~~~~~ 257 (365)
T cd03825 201 GTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPE------------IP-------PDLPFPVHYLGS----LNDDES 257 (365)
T ss_pred CCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchh------------hh-------ccCCCceEecCC----cCCHHH
Confidence 65 89999999999998764 578999999998651 01 145678999994 44 678
Q ss_pred HHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHH
Q 003987 658 LYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS 737 (781)
Q Consensus 658 l~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~ 737 (781)
+..+++. +|++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++|.+++ .|++
T Consensus 258 ~~~~~~~-ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~----~~~~ 332 (365)
T cd03825 258 LALIYSA-ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL----ADPD 332 (365)
T ss_pred HHHHHHh-CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH----hCHH
Confidence 8899995 9999999999999999999999999999999999999999999999999999999999998887 7999
Q ss_pred HHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 738 HWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 738 ~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
.++++++++++.+.++|||+. +++.|.++++
T Consensus 333 ~~~~~~~~~~~~~~~~~s~~~--~~~~~~~~y~ 363 (365)
T cd03825 333 EREELGEAARELAENEFDSRV--QAKRYLSLYE 363 (365)
T ss_pred HHHHHHHHHHHHHHHhcCHHH--HHHHHHHHHh
Confidence 999999999999999999965 4466776664
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=311.44 Aligned_cols=398 Identities=18% Similarity=0.210 Sum_probs=253.4
Q ss_pred cCCCCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcc
Q 003987 273 GRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQR 352 (781)
Q Consensus 273 ~r~p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~ 352 (781)
+|....++|+++.|+.- ..||.++.+++-|++ |.++|++++ |.|+|..... .. .+.
T Consensus 28 ~~~~~~~~v~f~HP~~~----------~ggG~ERvl~~a~~~--------l~~~~~~~~--v~iyt~~~d~-~~---~~~ 83 (463)
T PLN02949 28 ARRSRKRAVGFFHPYTN----------DGGGGERVLWCAVRA--------IQEENPDLD--CVIYTGDHDA-SP---DSL 83 (463)
T ss_pred cccCCCcEEEEECCCCC----------CCCChhhHHHHHHHH--------HHhhCCCCe--EEEEcCCCCC-CH---HHH
Confidence 34445578999966542 346999999966665 467788544 3377765221 11 111
Q ss_pred eeeecCCCCeEE----EEeccCCCcccccccccccCchhhH---HHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHH
Q 003987 353 LERVSGTEHTHI----LRVPFRSEKGILRQWISRFDVWPYL---ETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLL 425 (781)
Q Consensus 353 ~e~v~~~~~~~I----~rvp~~~~~~~~~~~isr~~i~~yl---~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~ll 425 (781)
+......-++.+ ..+..+ .++|+++ ..|+++ -.....+...+.......||+++-....+ ....+
T Consensus 84 l~~~~~~~~i~~~~~~~~v~l~-----~~~~~~~-~~~~~~t~~~~~~~~~~l~~~~~~~~~p~v~vDt~~~~--~~~pl 155 (463)
T PLN02949 84 AARARDRFGVELLSPPKVVHLR-----KRKWIEE-ETYPRFTMIGQSLGSVYLAWEALCKFTPLYFFDTSGYA--FTYPL 155 (463)
T ss_pred HHHHHhhcceecCCCceEEEec-----ccccccc-ccCCceehHHHHHHHHHHHHHHHHhcCCCEEEeCCCcc--cHHHH
Confidence 111111112211 111110 1245543 344442 12222222222222223666555332212 12223
Q ss_pred HHHcCCcEEEEecCCcccC------------CCC----ChhhH-hhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhh
Q 003987 426 AYKMGITQCTIAHALEKTK------------YPD----SDIYW-KKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAG 488 (781)
Q Consensus 426 ar~~gvp~v~t~H~l~~~k------------~~~----s~~~~-k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~ 488 (781)
++..++|++...|-..... +.. ....+ ......|+.... ..+....+.||.|+++|....+.
T Consensus 156 ~~~~~~~v~~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~-~l~~~~~~~ad~ii~nS~~t~~~ 234 (463)
T PLN02949 156 ARLFGCKVVCYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFA-WMYGLVGRCAHLAMVNSSWTKSH 234 (463)
T ss_pred HHhcCCcEEEEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHH-HHHHHHcCCCCEEEECCHHHHHH
Confidence 4456899999999432111 000 00000 001111211111 13445678999999999877553
Q ss_pred ccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCC
Q 003987 489 TKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLS 568 (781)
Q Consensus 489 ~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~ 568 (781)
+++.. +. ..++.+++||+|.+.+...+.. .
T Consensus 235 l~~~~-------------------~~---~~~i~vvyp~vd~~~~~~~~~~----------------------------~ 264 (463)
T PLN02949 235 IEALW-------------------RI---PERIKRVYPPCDTSGLQALPLE----------------------------R 264 (463)
T ss_pred HHHHc-------------------CC---CCCeEEEcCCCCHHHcccCCcc----------------------------c
Confidence 32210 11 3478899999997654221100 0
Q ss_pred CCCCCEEEEEeeccCCCChHHHHHHHHHhhc----cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003987 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQ----LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~----~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~ 644 (781)
+.++++++++||+.+.||++.+++|++++.+ ..++++|+|+|+++. .++.++.++++++++++++.++|.
T Consensus 265 ~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~------~~~~~~~~eL~~la~~l~L~~~V~ 338 (463)
T PLN02949 265 SEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN------KEDEERLQKLKDRAKELGLDGDVE 338 (463)
T ss_pred cCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC------cccHHHHHHHHHHHHHcCCCCcEE
Confidence 2346789999999999999999999998754 246899999999854 122345678999999999999999
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccc-ccccc---CCeEEEECCCCHHH
Q 003987 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA-EIIEH---GASGFHIDPYHPDQ 720 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~-EiI~d---g~~G~lv~p~d~~~ 720 (781)
|+| .++.+++..+|+. ++++|+||..|+||++++|||+||+|||+++.||+. |+|.+ |.+|++++ |+++
T Consensus 339 f~g----~v~~~el~~ll~~-a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~ 411 (463)
T PLN02949 339 FHK----NVSYRDLVRLLGG-AVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEE 411 (463)
T ss_pred EeC----CCCHHHHHHHHHh-CcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--CHHH
Confidence 999 6778899999995 999999999999999999999999999999999975 77765 67899985 9999
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh--hhccchHHHHH
Q 003987 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD--GIVDPSPFVIN 770 (781)
Q Consensus 721 lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~--~il~~ye~ll~ 770 (781)
+|++|.++++ .+++.+++|+++|++++ ++|||+++ .+.+.+.++++
T Consensus 412 la~ai~~ll~---~~~~~r~~m~~~ar~~~-~~FS~e~~~~~~~~~i~~l~~ 459 (463)
T PLN02949 412 YADAILEVLR---MRETERLEIAAAARKRA-NRFSEQRFNEDFKDAIRPILN 459 (463)
T ss_pred HHHHHHHHHh---CCHHHHHHHHHHHHHHH-HHcCHHHHHHHHHHHHHHHHh
Confidence 9999998872 36888999999999999 67999876 44444444443
|
|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-32 Score=288.02 Aligned_cols=351 Identities=18% Similarity=0.216 Sum_probs=251.0
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++... .||...++. +|++.|.++||+|. +++............ ...
T Consensus 1 kIl~~~~~~~-----------~gG~~~~~~--------~l~~~l~~~g~~v~----v~~~~~~~~~~~~~~------~~~ 51 (353)
T cd03811 1 KILFVIPSLG-----------GGGAERVLL--------NLANGLDKRGYDVT----LVVLRDEGDYLELLP------SNV 51 (353)
T ss_pred CeEEEeeccc-----------CCCcchhHH--------HHHHHHHhcCceEE----EEEcCCCCccccccc------cch
Confidence 6888886432 589999999 77778899999999 887664332111000 000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCC-CchHHHHHHHHHcCCcEEEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~-~~~lva~llar~~gvp~v~t~H 438 (781)
............ ...+ .+...+.+.+.. .+||+||++.. ...+.+.+.++. ++|.+++.|
T Consensus 52 ~~~~~~~~~~~~-----------~~~~----~~~~~~~~~~~~---~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~ 112 (353)
T cd03811 52 KLIPVRVLKLKS-----------LRDL----LAILRLRRLLRK---EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEH 112 (353)
T ss_pred hhhceeeeeccc-----------ccch----hHHHHHHHHHHh---cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEc
Confidence 000001100000 0111 112223333333 38999999998 555555555544 899999999
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
+............+ ......++.+|.+++.|....+...+. .+. ..
T Consensus 113 ~~~~~~~~~~~~~~-------------~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~--~~ 158 (353)
T cd03811 113 NSLSLELKRKLRLL-------------LLIRKLYRRADKIVAVSEGVKEDLLKL-------------------LGI--PP 158 (353)
T ss_pred CcchhhhccchhHH-------------HHHHhhccccceEEEeccchhhhHHHh-------------------hcC--Cc
Confidence 87553321111000 124467889999999998765421111 111 14
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.+||||+|.+.+.+...... ..+. +.++++|+++||+.+.||++.+++++.++.
T Consensus 159 ~~~~vi~~~~~~~~~~~~~~~~~---------------------~~~~--~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~ 215 (353)
T cd03811 159 DKIEVIYNPIDIEEIRALAEEPL---------------------ELGI--PPDGPVILAVGRLSPQKGFDTLIRAFALLR 215 (353)
T ss_pred cccEEecCCcChhhcCcccchhh---------------------hcCC--CCCceEEEEEecchhhcChHHHHHHHHHhh
Confidence 68999999999887765432211 0122 456788999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
+..++++|+++|+++. .+.+.++++++++.++|.|.|... ++..+++. +|++|+||.+|+|
T Consensus 216 ~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~g~~~------~~~~~~~~-~d~~i~ps~~e~~ 276 (353)
T cd03811 216 KEGPDARLVILGDGPL------------REELEALAKELGLADRVHFLGFQS------NPYPYLKA-ADLFVLSSRYEGF 276 (353)
T ss_pred hcCCCceEEEEcCCcc------------HHHHHHHHHhcCCCccEEEecccC------CHHHHHHh-CCEEEeCcccCCC
Confidence 8778999999999876 566778899999999999999532 46778885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcC
Q 003987 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLV 755 (781)
Q Consensus 679 GltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ys 755 (781)
|++++|||+||+|||+|+.||..|++.++.+|++++++|.+++++.+..+ ..+..+++.++++++++++.+.++|+
T Consensus 277 ~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 277 PNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALAL-LDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred CcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHH-HhccCChHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999996544433 45668999999999999999999886
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-32 Score=290.82 Aligned_cols=353 Identities=15% Similarity=0.189 Sum_probs=244.0
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||++++++..| ..+||.+.++. .|+++|.++||+|+ +++............
T Consensus 1 kIl~i~~~~~~--------~~~gG~~~~~~--------~l~~~L~~~g~~v~----v~~~~~~~~~~~~~~--------- 51 (359)
T cd03823 1 RILVVNHLYPP--------RSVGGAEVVAH--------DLAEALAKRGHEVA----VLTAGEDPPRQDKEV--------- 51 (359)
T ss_pred CeeEEcccCCc--------ccccchHHHHH--------HHHHHHHhcCCceE----EEeCCCCCCCccccc---------
Confidence 68999965543 34799999999 67777889999999 887653322111000
Q ss_pred CCeEEEEecc--CCCcccccccccccCchhhH-HHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEE
Q 003987 360 EHTHILRVPF--RSEKGILRQWISRFDVWPYL-ETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCT 435 (781)
Q Consensus 360 ~~~~I~rvp~--~~~~~~~~~~isr~~i~~yl-~~f~~~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~ 435 (781)
.+..+...+. ....... ........+. ......+.+.+.. .+||+||+|.... .......++..++|+++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~ 125 (359)
T cd03823 52 IGVVVYGRPIDEVLRSALP---RDLFHLSDYDNPAVVAEFARLLED---FRPDVVHFHHLQGLGVSILRAARDRGIPIVL 125 (359)
T ss_pred ccceeeccccccccCCCch---hhhhHHHhccCHHHHHHHHHHHHH---cCCCEEEECCccchHHHHHHHHHhcCCCEEE
Confidence 0111111110 0000000 0000000010 1122223333333 4899999998754 34445567778999999
Q ss_pred EecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCC
Q 003987 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (781)
Q Consensus 436 t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~ 515 (781)
+.|+.+..... . .......|.++++|....+...+. +..
T Consensus 126 ~~hd~~~~~~~------~---------------~~~~~~~d~ii~~s~~~~~~~~~~--------------------~~~ 164 (359)
T cd03823 126 TLHDYWLICPR------Q---------------GLFKKGGDAVIAPSRFLLDRYVAN--------------------GLF 164 (359)
T ss_pred EEeeeeeecch------h---------------hhhccCCCEEEEeCHHHHHHHHHc--------------------CCC
Confidence 99975432210 0 011123399999998765522111 221
Q ss_pred CCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHH
Q 003987 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (781)
Q Consensus 516 ~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~ 595 (781)
..++.+|+||+|...+.+... +. +.++++|+++||+.+.||++.++++++
T Consensus 165 --~~~~~vi~n~~~~~~~~~~~~--------------------------~~--~~~~~~i~~~G~~~~~k~~~~li~~~~ 214 (359)
T cd03823 165 --AEKISVIRNGIDLDRAKRPRR--------------------------AP--PGGRLRFGFIGQLTPHKGVDLLLEAFK 214 (359)
T ss_pred --ccceEEecCCcChhhcccccc--------------------------CC--CCCceEEEEEecCccccCHHHHHHHHH
Confidence 468999999999877654321 01 356778999999999999999999999
Q ss_pred HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC-
Q 003987 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF- 674 (781)
Q Consensus 596 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~- 674 (781)
++.+ ++++|+++|.+.. ........ +..++|.++| .++.+++..+++. +|++++||.
T Consensus 215 ~l~~--~~~~l~i~G~~~~------------~~~~~~~~---~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~ps~~ 272 (359)
T cd03823 215 RLPR--GDIELVIVGNGLE------------LEEESYEL---EGDPRVEFLG----AYPQEEIDDFYAE-IDVLVVPSIW 272 (359)
T ss_pred HHHh--cCcEEEEEcCchh------------hhHHHHhh---cCCCeEEEeC----CCCHHHHHHHHHh-CCEEEEcCcc
Confidence 9876 7899999999876 11111111 5668899999 6668899999995 999999997
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003987 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 675 ~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~y 754 (781)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++ +|++.+++++++++++...
T Consensus 273 ~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~~-- 346 (359)
T cd03823 273 PENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLI----DDPDLLERLRAGIEPPRSI-- 346 (359)
T ss_pred cCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHH----hChHHHHHHHHhHHHhhhH--
Confidence 7999999999999999999999999999999999999999999999999998887 7999999999999887743
Q ss_pred CcchhhhccchHHHHH
Q 003987 755 VVSSDGIVDPSPFVIN 770 (781)
Q Consensus 755 sw~~~~il~~ye~ll~ 770 (781)
..+++.|++++.
T Consensus 347 ----~~~~~~~~~~~~ 358 (359)
T cd03823 347 ----EDQAEEYLKLYR 358 (359)
T ss_pred ----HHHHHHHHHHhh
Confidence 455566766653
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=287.77 Aligned_cols=351 Identities=17% Similarity=0.228 Sum_probs=254.2
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+++++. .||...++. .|++.|.++||+|+ +++....... ....
T Consensus 1 kIl~i~~~-------------~~g~~~~~~--------~l~~~L~~~g~~v~----~~~~~~~~~~----------~~~~ 45 (359)
T cd03808 1 KILHIVTV-------------DGGLYSFRL--------PLIKALRAAGYEVH----VVAPPGDELE----------ELEA 45 (359)
T ss_pred CeeEEEec-------------chhHHHHHH--------HHHHHHHhcCCeeE----EEecCCCccc----------cccc
Confidence 67888754 368888888 77778899999999 8876633211 0112
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHH-HcCCcEEEEec
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAY-KMGITQCTIAH 438 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar-~~gvp~v~t~H 438 (781)
.++.++.+|..... .+ .+..+. ....+.+.+. ..+||+||++...+...+.+.++ ..+.+++.+.|
T Consensus 46 ~~~~~~~~~~~~~~------~~---~~~~~~-~~~~~~~~~~---~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 112 (359)
T cd03808 46 LGVKVIPIPLDRRG------IN---PFKDLK-ALLRLYRLLR---KERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVH 112 (359)
T ss_pred CCceEEeccccccc------cC---hHhHHH-HHHHHHHHHH---hcCCCEEEEccccchhHHHHHHHHcCCCCEEEEec
Confidence 25667777655411 11 111111 1122233333 34899999998877777777776 45567777888
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
+........ ....+ .+. ..+...++.+|.+++.|........+. .+.+ ..
T Consensus 113 ~~~~~~~~~-~~~~~----~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~~-~~ 162 (359)
T cd03808 113 GLGFVFTSG-GLKRR----LYL-----LLERLALRFTDKVIFQNEDDRDLALKL-------------------GIIK-KK 162 (359)
T ss_pred Ccchhhccc-hhHHH----HHH-----HHHHHHHhhccEEEEcCHHHHHHHHHh-------------------cCCC-cC
Confidence 754432111 11111 111 234567788999999998776522111 1111 13
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.++++|+|.+.+.+.... .+.++++|+++|++.+.||++.+++++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~ 214 (359)
T cd03808 163 KTVLIPGSGVDLDRFSPSPEP----------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILK 214 (359)
T ss_pred ceEEecCCCCChhhcCccccc----------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHH
Confidence 567788999998766543210 0346789999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHH-HHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHE-LMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEA 677 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~-li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~ 677 (781)
+..++++|+|+|++... ..... ++.+++..++|+|+|. .+++..+++. +|++++||..|+
T Consensus 215 ~~~~~~~l~i~G~~~~~------------~~~~~~~~~~~~~~~~v~~~g~------~~~~~~~~~~-adi~i~ps~~e~ 275 (359)
T cd03808 215 AKGPNVRLLLVGDGDEE------------NPAAILEIEKLGLEGRVEFLGF------RDDVPELLAA-ADVFVLPSYREG 275 (359)
T ss_pred hcCCCeEEEEEcCCCcc------------hhhHHHHHHhcCCcceEEEeec------cccHHHHHHh-ccEEEecCcccC
Confidence 77889999999999761 11111 3667778889999995 3468888885 999999999999
Q ss_pred CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003987 678 FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 678 fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~ 757 (781)
||++++|||+||+|||+|+.++..|++.++.+|++++++|+++++++|.+++ .|++.++++++++++++.++|||+
T Consensus 276 ~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~ 351 (359)
T cd03808 276 LPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLI----EDPELRARMGQAARKRAEEEFDEE 351 (359)
T ss_pred cchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHhcCHH
Confidence 9999999999999999999999999999999999999999999999998876 899999999999999999999997
Q ss_pred hh
Q 003987 758 SD 759 (781)
Q Consensus 758 ~~ 759 (781)
..
T Consensus 352 ~~ 353 (359)
T cd03808 352 IV 353 (359)
T ss_pred HH
Confidence 64
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=295.70 Aligned_cols=359 Identities=19% Similarity=0.230 Sum_probs=252.4
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCC
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGT 359 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~ 359 (781)
||+|++.+..++ ..||++.|+. +|+++|.+.||+|+ +++............ ...
T Consensus 1 ~ili~~~~~~~~--------~~gG~~~~~~--------~l~~~L~~~~~~v~----~~~~~~~~~~~~~~~-----~~~- 54 (365)
T cd03809 1 RILIDARFLASR--------RPTGIGRYAR--------ELLRALLKLDPEEV----LLLLPGAPGLLLLPL-----RAA- 54 (365)
T ss_pred CEEEechhhhcC--------CCCcHHHHHH--------HHHHHHHhcCCceE----EEEecCccccccccc-----hhc-
Confidence 688888665521 5799999999 77778899999999 777663322111000 000
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecC
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHA 439 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~ 439 (781)
... . ... .....+.............+. ..+||+||+++...... +..++|+++++|+
T Consensus 55 --~~~--~-~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~-----~~~~~~~i~~~hd 112 (365)
T cd03809 55 --LRL--L-LRL---------PRRLLWGLLFLLRAGDRLLLL---LLGLDLLHSPHNTAPLL-----RLRGVPVVVTIHD 112 (365)
T ss_pred --ccc--c-ccc---------ccccccchhhHHHHHHHHHhh---hcCCCeeeecccccCcc-----cCCCCCEEEEecc
Confidence 000 0 000 001111111111111111222 24899999998776444 6679999999998
Q ss_pred CcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003987 440 LEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 440 l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~ 519 (781)
+............ ....+ .......++.+|.+++.|...++.+.+. .++ ...
T Consensus 113 ~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~d~~i~~s~~~~~~~~~~-------------------~~~--~~~ 164 (365)
T cd03809 113 LIPLRFPEYFSPG--FRRYF-----RRLLRRALRRADAIITVSEATKRDLLRY-------------------LGV--PPD 164 (365)
T ss_pred chhhhCcccCCHH--HHHHH-----HHHHHHHHHHcCEEEEccHHHHHHHHHH-------------------hCc--CHH
Confidence 7654433211111 00011 1234568899999999998766532211 111 256
Q ss_pred ceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc
Q 003987 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ 599 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~ 599 (781)
++.++|||+|...+.+..... +.. ... ..++++|+++||+.+.||++.+++++.++.+
T Consensus 165 ~~~vi~~~~~~~~~~~~~~~~-~~~-------------------~~~--~~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~ 222 (365)
T cd03809 165 KIVVIPLGVDPRFRPPPAEAE-VLR-------------------ALY--LLPRPYFLYVGTIEPRKNLERLLEAFARLPA 222 (365)
T ss_pred HEEeeccccCccccCCCchHH-HHH-------------------Hhc--CCCCCeEEEeCCCccccCHHHHHHHHHHHHH
Confidence 899999999998876654332 100 111 4567899999999999999999999999998
Q ss_pred cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCc
Q 003987 600 LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFG 679 (781)
Q Consensus 600 ~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fG 679 (781)
..++++|+++|.+... .......+++.++.++|.|+| .++.+++..+++. +|++++||.+|+||
T Consensus 223 ~~~~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-~d~~l~ps~~e~~~ 286 (365)
T cd03809 223 KGPDPKLVIVGKRGWL-----------NEELLARLRELGLGDRVRFLG----YVSDEELAALYRG-ARAFVFPSLYEGFG 286 (365)
T ss_pred hcCCCCEEEecCCccc-----------cHHHHHHHHHcCCCCeEEECC----CCChhHHHHHHhh-hhhhcccchhccCC
Confidence 7778999999987651 112223336778889999999 6677899999995 99999999999999
Q ss_pred HHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 680 LTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 680 ltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
++++|||++|+|||+|+.|+..|++. .+|++++++|.++++++|.+++ .|++.+.++++++++.+ ++|||++.
T Consensus 287 ~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~-~~~sw~~~ 359 (365)
T cd03809 287 LPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLL----EDPALREELRERGLARA-KRFSWEKT 359 (365)
T ss_pred CCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH-HhCCHHHH
Confidence 99999999999999999999999984 5699999999999999998876 89999999999999655 88999775
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-31 Score=283.96 Aligned_cols=362 Identities=21% Similarity=0.287 Sum_probs=261.5
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccc
Q 003987 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 380 (781)
Q Consensus 301 ~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~i 380 (781)
.||...++. .+++.|.+.||+|+ |++............ ... .....+.... ...+.
T Consensus 13 ~~g~~~~~~--------~~~~~l~~~g~~v~----v~~~~~~~~~~~~~~------~~~---~~~~~~~~~~---~~~~~ 68 (377)
T cd03798 13 NGGGGIFVK--------ELARALAKRGVEVT----VLAPGPWGPKLLDLL------KGR---LVGVERLPVL---LPVVP 68 (377)
T ss_pred CchHHHHHH--------HHHHHHHHCCCceE----EEecCCCCCCchhhc------ccc---cccccccccC---cchhh
Confidence 588888988 77788899999999 887664332111000 000 0000000000 00000
Q ss_pred cccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccc
Q 003987 381 SRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKY 459 (781)
Q Consensus 381 sr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y 459 (781)
... .......+...+.+.+.. ...+||+||+++... .+.+..+++..++|++.+.|+..........
T Consensus 69 ~~~-~~~~~~~~~~~~~~~l~~-~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~---------- 136 (377)
T cd03798 69 LLK-GPLLYLLAARALLKLLKL-KRFRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR---------- 136 (377)
T ss_pred ccc-cchhHHHHHHHHHHHHhc-ccCCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh----------
Confidence 000 111112333333444431 145999999997665 6677788888899999999986554322111
Q ss_pred cchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHH
Q 003987 460 HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK 539 (781)
Q Consensus 460 ~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~ 539 (781)
.........++.+|.+++.|....+...+. + .+..++.++|||+|...+.+....
T Consensus 137 ---~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--------------------~--~~~~~~~~i~~~~~~~~~~~~~~~ 191 (377)
T cd03798 137 ---LLRALLRRALRRADAVIAVSEALADELKAL--------------------G--IDPEKVTVIPNGVDTERFSPADRA 191 (377)
T ss_pred ---hHHHHHHHHHhcCCeEEeCCHHHHHHHHHh--------------------c--CCCCceEEcCCCcCcccCCCcchH
Confidence 011223457889999999998776522111 1 226799999999999887765432
Q ss_pred HHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCc
Q 003987 540 QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSK 619 (781)
Q Consensus 540 ~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~ 619 (781)
.. . ..+. ..+++.++++|++.+.||++.+++++..+.+..++++|+++|.+..
T Consensus 192 ~~--~------------------~~~~--~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~----- 244 (377)
T cd03798 192 EA--R------------------KLGL--PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL----- 244 (377)
T ss_pred HH--H------------------hccC--CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc-----
Confidence 21 0 0122 4567889999999999999999999999987778999999999876
Q ss_pred chHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 003987 620 DREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 699 (781)
Q Consensus 620 d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG 699 (781)
.+.+.++++++++.++|.+.| .++.+++..+++. +|++++|+..|++|++++|||+||+|||+++.|+
T Consensus 245 -------~~~~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~ 312 (377)
T cd03798 245 -------REALEALAAELGLEDRVTFLG----AVPHEEVPAYYAA-ADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG 312 (377)
T ss_pred -------hHHHHHHHHhcCCcceEEEeC----CCCHHHHHHHHHh-cCeeecchhhccCChHHHHHHhcCCCEEEecCCC
Confidence 567778888899999999999 6778899999995 9999999999999999999999999999999999
Q ss_pred cccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 700 PAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 700 ~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
..|++.++.+|++++++|+++++++|.+++ .+++. +++.++++.+.++|+|+. +.+.|.+++.
T Consensus 313 ~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~----~~~~~--~~~~~~~~~~~~~~s~~~--~~~~~~~~~~ 375 (377)
T cd03798 313 IPEIITDGENGLLVPPGDPEALAEAILRLL----ADPWL--RLGRAARRRVAERFSWEN--VAERLLELYR 375 (377)
T ss_pred hHHHhcCCcceeEECCCCHHHHHHHHHHHh----cCcHH--HHhHHHHHHHHHHhhHHH--HHHHHHHHHh
Confidence 999999999999999999999999998887 77776 788899999999999975 4455655554
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-32 Score=303.96 Aligned_cols=278 Identities=15% Similarity=0.082 Sum_probs=188.7
Q ss_pred CCCceEEEEcCCCc---hHHHH------HHHHHcCCcEEEEecCCcccC----CCCChhhHhhhh-----------cccc
Q 003987 405 QGFPDFIIGNYSDG---NLVAS------LLAYKMGITQCTIAHALEKTK----YPDSDIYWKKFD-----------EKYH 460 (781)
Q Consensus 405 ~~kpDIIh~~~~~~---~lva~------llar~~gvp~v~t~H~l~~~k----~~~s~~~~k~~~-----------~~y~ 460 (781)
..+|||||.|...+ ++... +..+..++|+|.|.|+.+... +...-..|+.-. ..+.
T Consensus 92 ~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d 171 (405)
T PRK10125 92 TPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVD 171 (405)
T ss_pred ccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccc
Confidence 45899999998776 33211 112345799999999987542 100000111000 0001
Q ss_pred ch-----hhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCC
Q 003987 461 FS-----CQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP 535 (781)
Q Consensus 461 f~-----~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p 535 (781)
.+ .+...-....+.++.+|+.|...++.... ..+ ..++.|||||+|.+.+.+
T Consensus 172 ~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~---------------------~~~--~~~i~vI~NGid~~~~~~ 228 (405)
T PRK10125 172 RAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNS---------------------LYG--PGRCRIINNGIDMATEAI 228 (405)
T ss_pred hHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHH---------------------HcC--CCCEEEeCCCcCcccccc
Confidence 11 11111112234578999999876552111 011 468999999999754332
Q ss_pred CcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeec--cCCCChHHHHHHHHHhhccCCCeEEEEEeCcC
Q 003987 536 YSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL--DHVKNMTGLVECYGKNSQLRELVNLVVVAGYI 613 (781)
Q Consensus 536 ~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL--~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~ 613 (781)
...... .. .++++++|+++|+. .+.||+..|++|+.++. ++++|+|+|+++
T Consensus 229 ~~~~~~----------------------~~--~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~ 281 (405)
T PRK10125 229 LAELPP----------------------VR--ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFS 281 (405)
T ss_pred cccccc----------------------cc--cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCC
Confidence 211100 00 03467789999994 46899999999998863 479999999875
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEE
Q 003987 614 DVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTF 693 (781)
Q Consensus 614 ~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVV 693 (781)
.. ...+|.++|+.. +..++..+|+. +|+||+||.+|+||++++||||||+|||
T Consensus 282 ~~-----------------------~~~~v~~~g~~~---~~~~l~~~y~~-aDvfV~pS~~Egfp~vilEAmA~G~PVV 334 (405)
T PRK10125 282 PF-----------------------TAGNVVNHGFET---DKRKLMSALNQ-MDALVFSSRVDNYPLILCEALSIGVPVI 334 (405)
T ss_pred cc-----------------------cccceEEecCcC---CHHHHHHHHHh-CCEEEECCccccCcCHHHHHHHcCCCEE
Confidence 40 024688898644 35688899995 9999999999999999999999999999
Q ss_pred EcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHH----HHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 694 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK----ISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 694 aT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~----~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
+|+.||.+|+|.++ +|++++|+|++++|+.+ +++..++ +.+++++++.++|||+. +++.|.+++
T Consensus 335 at~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~---------~~~~~~~~~~~~~~~~r~~~~~~fs~~~--~~~~y~~lY 402 (405)
T PRK10125 335 ATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS---------KPEIAQAVFGTTLAEFSQRSRAAYSGQQ--MLEEYVNFY 402 (405)
T ss_pred EeCCCChHHhEeCC-cEEEECCCCHHHHHhcc---------CHHHHHHhhhhHHHHHHHHHHHhCCHHH--HHHHHHHHH
Confidence 99999999999775 99999999999999854 4444443 34568999999999965 556677766
Q ss_pred Hh
Q 003987 770 NV 771 (781)
Q Consensus 770 ~~ 771 (781)
..
T Consensus 403 ~~ 404 (405)
T PRK10125 403 QN 404 (405)
T ss_pred Hh
Confidence 43
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=304.24 Aligned_cols=284 Identities=12% Similarity=0.098 Sum_probs=201.9
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HHcCCcEEEEecCCcccCCCCChhhHh-hhhccccchh--hhhHHHHHHhhCCEEEe
Q 003987 405 QGFPDFIIGNYSDGNLVASLLA-YKMGITQCTIAHALEKTKYPDSDIYWK-KFDEKYHFSC--QFTADLIAMNNADFIIT 480 (781)
Q Consensus 405 ~~kpDIIh~~~~~~~lva~lla-r~~gvp~v~t~H~l~~~k~~~s~~~~k-~~~~~y~f~~--~~~~e~~a~~~AD~IIt 480 (781)
..++|+||+++.... ..+. +..++|.+++.|+++...+........ .....|+... ....+...++.+|.|++
T Consensus 102 ~~~~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 178 (397)
T TIGR03087 102 AEPVDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLLAYERAIAARFDAATF 178 (397)
T ss_pred hCCCCEEEEeccccc---eeccccccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhhCCeEEE
Confidence 358999999875432 2222 356899999999864322110000000 0001111100 01246678899999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003987 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 481 ~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (781)
+|..+.+.+++. .+. ...++.+||||+|.+.|.+.....
T Consensus 179 ~S~~~~~~l~~~-------------------~~~--~~~~v~vipngvd~~~f~~~~~~~-------------------- 217 (397)
T TIGR03087 179 VSRAEAELFRRL-------------------APE--AAGRITAFPNGVDADFFSPDRDYP-------------------- 217 (397)
T ss_pred cCHHHHHHHHHh-------------------CCC--CCCCeEEeecccchhhcCCCcccc--------------------
Confidence 999886532211 011 146899999999998876543210
Q ss_pred ccccCCCCCCCCCEEEEEeeccCCCChHHHH----HHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH
Q 003987 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLV----ECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT 636 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~Li----eA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~e 636 (781)
..+ .+++++|+|+||+++.||++.++ +++..+.+..|+++|+|+|+|+. +. +++
T Consensus 218 ---~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~-------------~~----~~~ 275 (397)
T TIGR03087 218 ---NPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS-------------PA----VRA 275 (397)
T ss_pred ---CCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh-------------HH----HHH
Confidence 011 24567899999999999999988 56666766778999999999965 12 233
Q ss_pred cCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECC
Q 003987 637 YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP 715 (781)
Q Consensus 637 lgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p 715 (781)
++..++|+|+|+++ ++..+++. +|++|+||. .||+|++++|||+||+|||+|+.|+. .+...+++|++++
T Consensus 276 l~~~~~V~~~G~v~------~~~~~~~~-adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~- 346 (397)
T TIGR03087 276 LAALPGVTVTGSVA------DVRPYLAH-AAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA- 346 (397)
T ss_pred hccCCCeEEeeecC------CHHHHHHh-CCEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-
Confidence 44457899999543 47788885 999999997 69999999999999999999997643 3444456799996
Q ss_pred CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 716 YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 716 ~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
+|+++++++|.+++ +|++.+++|+++|++++.++|||+. +++.|++++
T Consensus 347 ~~~~~la~ai~~ll----~~~~~~~~~~~~ar~~v~~~fsw~~--~~~~~~~~l 394 (397)
T TIGR03087 347 ADPADFAAAILALL----ANPAEREELGQAARRRVLQHYHWPR--NLARLDALL 394 (397)
T ss_pred CCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHH--HHHHHHHHh
Confidence 89999999998887 8999999999999999999999964 556677776
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-31 Score=306.10 Aligned_cols=280 Identities=19% Similarity=0.246 Sum_probs=211.0
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCC--hhhHhhhhccccchhhhhHHHHHHhhCCEEEecC
Q 003987 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDS--DIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (781)
Q Consensus 405 ~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s--~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (781)
..++||+|++.+.....+ ++.....+|.+.++|+-........ ...|. ..|.+ ....++.+|.+|++|
T Consensus 209 ~~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~---~~y~~------~~~~~~~~D~iI~~S 278 (500)
T TIGR02918 209 LTKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESATNETYILWN---NYYEY------QFSNADYIDFFITAT 278 (500)
T ss_pred CCCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccCcchhHHHH---HHHHH------HHhchhhCCEEEECC
Confidence 458999999776653333 4455668999999998443222111 11122 11211 123467799999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccc
Q 003987 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (781)
Q Consensus 483 ~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (781)
....+.+.+.+++| +. ..+++.+||||++...+.|..
T Consensus 279 ~~~~~~l~~~~~~~----------------~~--~~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 279 DIQNQILKNQFKKY----------------YN--IEPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred HHHHHHHHHHhhhh----------------cC--CCCcEEEEcCCCcccccCccc-------------------------
Confidence 87655333332222 11 156899999998754432210
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~ 642 (781)
...+..|+++||+.+.||++.|++|++++.+..|+++|+|+|+|+. .+.++++++++++.++
T Consensus 316 ------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~------------~~~l~~~i~~~~l~~~ 377 (500)
T TIGR02918 316 ------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE------------KQKLQKIINENQAQDY 377 (500)
T ss_pred ------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh------------HHHHHHHHHHcCCCCe
Confidence 1234579999999999999999999999998889999999999976 5789999999999999
Q ss_pred EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCCeEEEECCC----C
Q 003987 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPY----H 717 (781)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g-G~~EiI~dg~~G~lv~p~----d 717 (781)
|.|+|. .+ +..+++ .+|++|+||.+||||++++||||||+|||+|+.+ |++|+|.+|.+|++++++ |
T Consensus 378 V~f~G~----~~---~~~~~~-~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 378 IHLKGH----RN---LSEVYK-DYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDD 449 (500)
T ss_pred EEEcCC----CC---HHHHHH-hCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccc
Confidence 999994 22 455666 5999999999999999999999999999999986 899999999999999843 3
Q ss_pred ----HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003987 718 ----PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 718 ----~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
++++|++|.+++ . ++.+++|+++|++.+ ++||| ..+++.|+++++.
T Consensus 450 ~~~~~~~la~~I~~ll----~-~~~~~~~~~~a~~~a-~~fs~--~~v~~~w~~ll~~ 499 (500)
T TIGR02918 450 EDQIITALAEKIVEYF----N-SNDIDAFHEYSYQIA-EGFLT--ANIIEKWKKLVRE 499 (500)
T ss_pred hhHHHHHHHHHHHHHh----C-hHHHHHHHHHHHHHH-HhcCH--HHHHHHHHHHHhh
Confidence 788888887776 4 557899999999977 78999 5577889888864
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-30 Score=292.48 Aligned_cols=271 Identities=16% Similarity=0.249 Sum_probs=214.8
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCc-EEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecC
Q 003987 405 QGFPDFIIGNYSDG-NLVASLLAYKMGIT-QCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (781)
Q Consensus 405 ~~kpDIIh~~~~~~-~lva~llar~~gvp-~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (781)
..++|++|+++... .+.+.++.++.+.+ ++.++|+..... ......+. ......++.+|.||++|
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--------~~~~~~~~-----~~~~~~~~~~d~ii~~S 191 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--------DRYPSGYI-----PLRRYLLSSLDAVFPCS 191 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--------hhccccch-----HHHHHHHhcCCEEEECC
Confidence 46788999876554 55556677777776 899999753211 01111111 11234578999999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccc
Q 003987 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (781)
Q Consensus 483 ~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (781)
....+.+++.. +....++.+++||+|...+.+..
T Consensus 192 ~~~~~~l~~~~---------------------~~~~~ki~vi~~gv~~~~~~~~~------------------------- 225 (407)
T cd04946 192 EQGRNYLQKRY---------------------PAYKEKIKVSYLGVSDPGIISKP------------------------- 225 (407)
T ss_pred HHHHHHHHHHC---------------------CCccccEEEEECCcccccccCCC-------------------------
Confidence 98766332221 22256889999999986553320
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC--CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE--LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~--~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~ 640 (781)
...+++.|+++||+.+.||++.+++|+.++.+.+| ++.++++|+|+. .+.+++++++.+..
T Consensus 226 -----~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~------------~~~l~~~~~~~~~~ 288 (407)
T cd04946 226 -----SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL------------EDTLKELAESKPEN 288 (407)
T ss_pred -----CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH------------HHHHHHHHHhcCCC
Confidence 02456789999999999999999999999988765 466788999866 56788888888888
Q ss_pred CcEEEeccccCcCChHHHHHHHHc-cCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCC-CH
Q 003987 641 GQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY-HP 718 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~-d~ 718 (781)
++|.|+| .++.+++..+++. .+|+||+||.+||||++++|||+||+|||+|+.||..|+|.++++|+++++. |+
T Consensus 289 ~~V~f~G----~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 289 ISVNFTG----ELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred ceEEEec----CCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 8999999 6677899999974 3789999999999999999999999999999999999999999999999874 89
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
++++++|.+++ +||+.+++|+++|++++.++|||+..
T Consensus 365 ~~la~~I~~ll----~~~~~~~~m~~~ar~~~~~~f~~~~~ 401 (407)
T cd04946 365 NELVSSLSKFI----DNEEEYQTMREKAREKWEENFNASKN 401 (407)
T ss_pred HHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHcCHHHh
Confidence 99999998887 79999999999999999999999764
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=282.92 Aligned_cols=318 Identities=13% Similarity=0.059 Sum_probs=213.5
Q ss_pred HHHHHHHHCCC-ceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchh---hHHHH-
Q 003987 318 EMLLRIKRQGL-DISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWP---YLETF- 392 (781)
Q Consensus 318 eLa~~L~~~Gh-eV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~---yl~~f- 392 (781)
+++.+|+++|+ +|+ |+|...+. .........+++|+++|...... . ++ .++. |+...
T Consensus 23 ~~~~~l~~~~~~~v~----vi~~~~~~--------~~~~~~~~~~v~v~r~~~~~~~~---~-~~--~~~~~~~~~~~~~ 84 (371)
T PLN02275 23 YHALSLARQASFQVD----VVAYGGSE--------PIPALLNHPSIHIHLMVQPRLLQ---R-LP--RVLYALALLLKVA 84 (371)
T ss_pred HHHHHHHhcCCceEE----EEEecCCC--------CCHHHhcCCcEEEEECCCccccc---c-cc--cchHHHHHHHHHH
Confidence 46667788886 799 88753211 11111223468999997521110 0 11 1222 33221
Q ss_pred --HHHHHHHHHHHcCCCceEEEEcCCCc---hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhH
Q 003987 393 --TEDVGSEITAELQGFPDFIIGNYSDG---NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTA 467 (781)
Q Consensus 393 --~~~~~~~i~~~~~~kpDIIh~~~~~~---~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~ 467 (781)
...+...+.. ...+||+||+|.+.. .+.+.++++..++|++++.|+++..... ..... ....+++.. ..
T Consensus 85 ~~~~~~~~~~~~-~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~-~~~~~--~~~~~~~~~--~~ 158 (371)
T PLN02275 85 IQFLMLLWFLCV-KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLA-LSLGR--SHPLVRLYR--WY 158 (371)
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHh-cccCC--CCHHHHHHH--HH
Confidence 1122222111 145999999987553 4567778888899999999986421100 00000 000011111 23
Q ss_pred HHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhh
Q 003987 468 DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH 547 (781)
Q Consensus 468 e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~ 547 (781)
+...++.||.||++|....+...+. .|+ ++.+|+||. .+.|.|......
T Consensus 159 e~~~~~~ad~ii~~S~~~~~~l~~~-------------------~g~-----~i~vi~n~~-~~~f~~~~~~~~------ 207 (371)
T PLN02275 159 ERHYGKMADGHLCVTKAMQHELDQN-------------------WGI-----RATVLYDQP-PEFFRPASLEIR------ 207 (371)
T ss_pred HHHHHhhCCEEEECCHHHHHHHHHh-------------------cCC-----CeEEECCCC-HHHcCcCCchhc------
Confidence 5678899999999998876522111 122 278999984 455655322100
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh-----------------ccCCCeEEEEEe
Q 003987 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS-----------------QLRELVNLVVVA 610 (781)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~-----------------~~~~~v~LvIVG 610 (781)
+. .+...+++++||+.+.||++.+++|+..+. +..|+++|+|+|
T Consensus 208 ----------------~~---~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG 268 (371)
T PLN02275 208 ----------------LR---PNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITG 268 (371)
T ss_pred ----------------cc---CCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEe
Confidence 10 123457889999999999999999998873 235789999999
Q ss_pred CcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcC---CCCCCcHHHHHHHH
Q 003987 611 GYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPA---FYEAFGLTVVEAMT 687 (781)
Q Consensus 611 ~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS---~~E~fGltvlEAMa 687 (781)
+|+. .++++++++++++++ +.|.+. .++.+++..+|+. +|++|.|+ ..|+||++++||||
T Consensus 269 ~G~~------------~~~l~~~~~~~~l~~-v~~~~~---~~~~~~~~~~l~~-aDv~v~~~~s~~~e~~p~~llEAmA 331 (371)
T PLN02275 269 KGPQ------------KAMYEEKISRLNLRH-VAFRTM---WLEAEDYPLLLGS-ADLGVSLHTSSSGLDLPMKVVDMFG 331 (371)
T ss_pred CCCC------------HHHHHHHHHHcCCCc-eEEEcC---CCCHHHHHHHHHh-CCEEEEeccccccccccHHHHHHHH
Confidence 9987 678999999999976 887662 4668899999995 99999863 24899999999999
Q ss_pred cCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHH
Q 003987 688 CGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 728 (781)
Q Consensus 688 ~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~ 728 (781)
||+|||+|+.||..|+|+++++|++++ |++++|++|.++
T Consensus 332 ~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l 370 (371)
T PLN02275 332 CGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLEL 370 (371)
T ss_pred CCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHh
Confidence 999999999999999999999999997 699999999765
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-29 Score=273.67 Aligned_cols=269 Identities=20% Similarity=0.263 Sum_probs=208.8
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCC-hhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003987 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDS-DIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 406 ~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s-~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
.++|+||++....... .++......+.+.++|+......... ...|+ ..|.. ....++.+|.||++|..
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~d~ii~~s~~ 167 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLIN---NFYEY------VFENLDKVDGVIVATEQ 167 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCcccccccccc---hhhHH------HHhChhhCCEEEEccHH
Confidence 5899999988775333 23444455677889997543221110 01111 11111 11246789999999987
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003987 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 485 ~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (781)
....+.+.. +. ..++.+||||++...+.+...
T Consensus 168 ~~~~l~~~~-------------------~~---~~~v~~ip~g~~~~~~~~~~~-------------------------- 199 (372)
T cd04949 168 QKQDLQKQF-------------------GN---YNPIYTIPVGSIDPLKLPAQF-------------------------- 199 (372)
T ss_pred HHHHHHHHh-------------------CC---CCceEEEcccccChhhcccch--------------------------
Confidence 765332221 11 235889999999876654320
Q ss_pred CCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003987 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~ 644 (781)
....+..++++||+.+.||++.+++++.++.+..|+++|+|+|.|+. ...+..+++++++.++|.
T Consensus 200 ---~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~~~~v~ 264 (372)
T cd04949 200 ---KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDE------------EEKLKELIEELGLEDYVF 264 (372)
T ss_pred ---hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCch------------HHHHHHHHHHcCCcceEE
Confidence 02345689999999999999999999999998889999999999976 456778888999999999
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc-ccccccccCCeEEEECCCCHHHHHH
Q 003987 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GPAEIIEHGASGFHIDPYHPDQAAE 723 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g-G~~EiI~dg~~G~lv~p~d~~~lA~ 723 (781)
|.|+. +++.++++. +|++|.||..|+||++++|||+||+|||+|+.+ |+.++|.++.+|++++++|++++++
T Consensus 265 ~~g~~------~~~~~~~~~-ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~ 337 (372)
T cd04949 265 LKGYT------RDLDEVYQK-AQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAE 337 (372)
T ss_pred EcCCC------CCHHHHHhh-hhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHH
Confidence 99943 357788885 999999999999999999999999999999987 8999999999999999999999999
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 724 LMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 724 ~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
+|..++ .|++.++++++++++.+ ++|||+..
T Consensus 338 ~i~~ll----~~~~~~~~~~~~a~~~~-~~~s~~~~ 368 (372)
T cd04949 338 AIIELL----NDPKLLQKFSEAAYENA-ERYSEENV 368 (372)
T ss_pred HHHHHH----cCHHHHHHHHHHHHHHH-HHhhHHHH
Confidence 998888 89999999999999995 89999653
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-29 Score=275.21 Aligned_cols=260 Identities=20% Similarity=0.244 Sum_probs=186.3
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhh------HhhhhccccchhhhhHHHHHHhhCCEE
Q 003987 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIY------WKKFDEKYHFSCQFTADLIAMNNADFI 478 (781)
Q Consensus 405 ~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~------~k~~~~~y~f~~~~~~e~~a~~~AD~I 478 (781)
..++|+||++.... +..+.+..++|.+...|+.....+.....+ ++.....+-+......+..+++++|.+
T Consensus 81 ~~~~D~v~~~~~~~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i 157 (351)
T cd03804 81 LSGYDLVISSSHAV---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYF 157 (351)
T ss_pred ccCCCEEEEcCcHH---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEE
Confidence 45899999876432 222225567888888886321111100000 000000000001112345678999999
Q ss_pred EecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcc
Q 003987 479 ITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 558 (781)
Q Consensus 479 It~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~ 558 (781)
+++|...++...+. +..+..+|+||+|.+.|.+..
T Consensus 158 i~~S~~~~~~~~~~------------------------~~~~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 158 IANSRFVARRIKKY------------------------YGRDATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred EECCHHHHHHHHHH------------------------hCCCcEEECCCCCHhhcCcCC---------------------
Confidence 99999876532111 134567999999987664421
Q ss_pred ccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC
Q 003987 559 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 638 (781)
Q Consensus 559 ~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elg 638 (781)
..++.++++||+.+.||++.+++|+++++ ++|+|+|+|+. .+.+++ +
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l~ivG~g~~------------~~~l~~-----~ 239 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRLVVIGDGPE------------LDRLRA-----K 239 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcEEEEECChh------------HHHHHh-----h
Confidence 23457899999999999999999998763 78999999965 333333 4
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH
Q 003987 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718 (781)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~ 718 (781)
..++|+|+| .++.+++..+++. +|++|+||. |+||++++|||+||+|||+|+.||..|++.++.+|++++++|+
T Consensus 240 ~~~~V~~~g----~~~~~~~~~~~~~-ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 240 AGPNVTFLG----RVSDEELRDLYAR-ARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred cCCCEEEec----CCCHHHHHHHHHh-CCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 568999999 6778899999995 999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
++++++|..++ +|++ .+.+++++++ ++|+|+..
T Consensus 314 ~~la~~i~~l~----~~~~---~~~~~~~~~~-~~~~~~~~ 346 (351)
T cd03804 314 ESLAAAVERFE----KNED---FDPQAIRAHA-ERFSESRF 346 (351)
T ss_pred HHHHHHHHHHH----hCcc---cCHHHHHHHH-HhcCHHHH
Confidence 99999998887 6763 2334444555 56888664
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-28 Score=274.92 Aligned_cols=270 Identities=11% Similarity=0.099 Sum_probs=190.7
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCc-hHH--HHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHH
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDG-NLV--ASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA 471 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~-~lv--a~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a 471 (781)
++.+.+.+ .+|||||.+.+.. ++. |..+|++++ |+|.++|+.... |.... .....-.+..+.. . ..
T Consensus 425 dI~~~L~~---f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~e-Yl~~y----~~g~L~~~llk~l-~-~~ 493 (794)
T PLN02501 425 DTSQFIPS---KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYLE-YIKRE----KNGALQAFFVKHI-N-NW 493 (794)
T ss_pred HHHHHhhc---cCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcHH-HHhHh----cchhHHHHHHHHH-H-HH
Confidence 34444443 4899999999886 677 888999999 899999986542 11100 0000001011000 0 12
Q ss_pred Hhh--CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcc
Q 003987 472 MNN--ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGS 549 (781)
Q Consensus 472 ~~~--AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~ 549 (781)
+.. ||.|++.|..... +. ...+..| ||||.+.|.|......+
T Consensus 494 v~r~hcD~VIaPS~atq~--------------------------L~--~~vI~nV-nGVDte~F~P~~r~~~~------- 537 (794)
T PLN02501 494 VTRAYCHKVLRLSAATQD--------------------------LP--KSVICNV-HGVNPKFLKIGEKVAEE------- 537 (794)
T ss_pred HHHhhCCEEEcCCHHHHH--------------------------hc--ccceeec-ccccccccCCcchhHHH-------
Confidence 222 8999999965432 00 1122222 69999999886553322
Q ss_pred hhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHH
Q 003987 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEK 629 (781)
Q Consensus 550 i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~ 629 (781)
..+|. +...+.++|+|||.+.||++.|++|++++.+..++++|+|+|+|+. .+.
T Consensus 538 ------------r~lgi--~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~------------ree 591 (794)
T PLN02501 538 ------------RELGQ--QAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED------------AHE 591 (794)
T ss_pred ------------HhcCC--ccccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc------------HHH
Confidence 12343 2223458899999999999999999999887778999999999987 678
Q ss_pred HHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCe
Q 003987 630 MHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS 709 (781)
Q Consensus 630 l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~ 709 (781)
+++++.++++ +|.|+|.+.+ ...+|+ ++|+||+||.+|+||++++||||||+|||+|+.+|. +++.++.+
T Consensus 592 Le~la~eLgL--~V~FLG~~dd------~~~lya-saDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~n 661 (794)
T PLN02501 592 VQRAAKRLDL--NLNFLKGRDH------ADDSLH-GYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPN 661 (794)
T ss_pred HHHHHHHcCC--EEEecCCCCC------HHHHHH-hCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCC
Confidence 8899999887 4999995432 345777 599999999999999999999999999999999985 44777888
Q ss_pred EEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 710 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 710 G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
|+++ +|+++++++|.+++ .|+..+..+.+ ...|||++.
T Consensus 662 Gll~--~D~EafAeAI~~LL----sd~~~rl~~~a------~~~~SWeAa 699 (794)
T PLN02501 662 CLTY--KTSEDFVAKVKEAL----ANEPQPLTPEQ------RYNLSWEAA 699 (794)
T ss_pred eEec--CCHHHHHHHHHHHH----hCchhhhHHHH------HhhCCHHHH
Confidence 8875 69999999999888 56654433322 248899653
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-28 Score=272.73 Aligned_cols=436 Identities=16% Similarity=0.161 Sum_probs=285.9
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeee--
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV-- 356 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v-- 356 (781)
|||+.+|.-..| .-.+||....+- .|.+.|++.|++|. |+.+.++. ....+....+.+
T Consensus 1 M~Il~v~~E~~p-------~vK~GGLaDv~~--------alpk~L~~~g~~v~----v~lP~y~~-~~~~~~~~~~~~~~ 60 (487)
T COG0297 1 MKILFVASEIFP-------FVKTGGLADVVG--------ALPKALAKRGVDVR----VLLPSYPK-VQKEWRDLLKVVGK 60 (487)
T ss_pred CcceeeeeeecC-------ccccCcHHHHHH--------HhHHHHHhcCCeEE----EEcCCchh-hhhhhccccceeeE
Confidence 789998877664 347899888888 56677899999999 88888763 222222221111
Q ss_pred ----cC-CCCeEEEEeccCC--Cccc-c--ccccccc--Cch------hhHHHHHHHHHHHHHHHcC--CCceEEEEcCC
Q 003987 357 ----SG-TEHTHILRVPFRS--EKGI-L--RQWISRF--DVW------PYLETFTEDVGSEITAELQ--GFPDFIIGNYS 416 (781)
Q Consensus 357 ----~~-~~~~~I~rvp~~~--~~~~-~--~~~isr~--~i~------~yl~~f~~~~~~~i~~~~~--~kpDIIh~~~~ 416 (781)
.+ .....++...... -+-+ + ....+|. ..+ -.+..|...+...+-. .. ..|||||+|+|
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~v~~~lid~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~-~~~~~~pDIvH~hDW 139 (487)
T COG0297 61 FGVLKGGRAQLFIVKEYGKDGGVDLYLIDNPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPL-GLISWLPDIVHAHDW 139 (487)
T ss_pred eeeeecccceEEEEEeecccCCCcEEEecChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhh-cCCCCCCCEEEeecH
Confidence 10 0111111111100 0000 0 1112221 111 1223344333333322 12 37999999999
Q ss_pred CchHHHHHHHHH----cCCcEEEEecCCcccCCCC-ChhhHhhhh-cccc-----chhhhhHHHHHHhhCCEEEecCHHH
Q 003987 417 DGNLVASLLAYK----MGITQCTIAHALEKTKYPD-SDIYWKKFD-EKYH-----FSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 417 ~~~lva~llar~----~gvp~v~t~H~l~~~k~~~-s~~~~k~~~-~~y~-----f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
..+++..+++.. ..+|.|+|+|++..+.... ....+-.+. ..|+ +..+....+..+..||.|.|+|+..
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~vttVSptY 219 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADAVTTVSPTY 219 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccEEEEECHHH
Confidence 999999999984 4799999999986654332 111111111 1111 1122334556788899999999988
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccC
Q 003987 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (781)
Q Consensus 486 ~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g 565 (781)
+...... .| +..+.++.+ ....++.-|-||+|.+.+.|.++......--.+..+....++....+++|
T Consensus 220 a~Ei~t~--~~----g~gl~g~l~------~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~g 287 (487)
T COG0297 220 AGEIYTP--EY----GEGLEGLLS------WRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLG 287 (487)
T ss_pred HHhhccc--cc----cccchhhhh------hccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhC
Confidence 7643311 11 112222221 11357888999999999988766422110000111123334555667889
Q ss_pred CCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003987 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (781)
Q Consensus 566 ~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~f 645 (781)
+..+.+.|++.++||+..+||++.+++++..+.+.. ++|++.|.|.. ...+.+..+++++.. ++..
T Consensus 288 L~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~vilG~gd~----------~le~~~~~la~~~~~--~~~~ 353 (487)
T COG0297 288 LDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQLVLLGTGDP----------ELEEALRALASRHPG--RVLV 353 (487)
T ss_pred CCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceEEEEecCcH----------HHHHHHHHHHHhcCc--eEEE
Confidence 976778899999999999999999999999998864 99999999933 567788888888753 4444
Q ss_pred eccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc--------CCeEEEECCCC
Q 003987 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--------GASGFHIDPYH 717 (781)
Q Consensus 646 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d--------g~~G~lv~p~d 717 (781)
.- .. ++.+.+.+...+|++++||++|+||++-++||..|+++|++.+||.++.|.+ ..+|+++.+.+
T Consensus 354 ~i----~~-~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~ 428 (487)
T COG0297 354 VI----GY-DEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTN 428 (487)
T ss_pred Ee----ee-cHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCC
Confidence 33 22 3455555555799999999999999999999999999999999999998875 57999999999
Q ss_pred HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh--hhccchHHHH
Q 003987 718 PDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD--GIVDPSPFVI 769 (781)
Q Consensus 718 ~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~--~il~~ye~ll 769 (781)
+++++.+|.+.+.-....+..|+.+..++.. ..|+|+.+ ...+.|+.++
T Consensus 429 ~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~~ 479 (487)
T COG0297 429 PDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPLL 479 (487)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHHh
Confidence 9999999998886666666669999998877 68999886 3344444443
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=262.38 Aligned_cols=256 Identities=13% Similarity=0.091 Sum_probs=185.6
Q ss_pred EcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHH-HhhCCEEEecCHHHHhhccc
Q 003987 413 GNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA-MNNADFIITSTYQEIAGTKN 491 (781)
Q Consensus 413 ~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a-~~~AD~IIt~S~~~~~~~k~ 491 (781)
.|+....+..+...++.|+|+++++|+... +.. ..+... .+.+|.||++|....+.+.+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~-------l~~-------------~~~~~~~~~~ad~ii~~S~~~~~~l~~ 111 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA-------ISH-------------TALYFFRNQPVDEIVVPSQWSKNAFYT 111 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech-------hhH-------------HHHHHHhhccCCEEEECCHHHHHHHHH
Confidence 455444555555556679999999997211 000 112234 67899999999887652211
Q ss_pred cccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCC
Q 003987 492 TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRS 571 (781)
Q Consensus 492 ~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~ 571 (781)
.|++. ..++.+||||+|.+.|.+.... ..+
T Consensus 112 --------------------~g~~~-~~~i~vIpNGVd~~~f~~~~~~-----------------------------~~~ 141 (331)
T PHA01630 112 --------------------SGLKI-PQPIYVIPHNLNPRMFEYKPKE-----------------------------KPH 141 (331)
T ss_pred --------------------cCCCC-CCCEEEECCCCCHHHcCCCccc-----------------------------cCC
Confidence 12221 3589999999998877653210 123
Q ss_pred CCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003987 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~ 651 (781)
+.++++.|++.+.||++.|++|++++.+..++++|+|+|++.. ..++ .++.+ +.|
T Consensus 142 ~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~------------~~~l------~~~~~---~~~---- 196 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNML------------DPRL------FGLNG---VKT---- 196 (331)
T ss_pred CEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCccc------------chhh------ccccc---eec----
Confidence 4567788899999999999999999988778999999997654 1111 12222 233
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECC----------------
Q 003987 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP---------------- 715 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p---------------- 715 (781)
.++.+++..+|+. +|+||+||.+|+||++++||||||+|||+|+.||..|+|.++.+|+++++
T Consensus 197 ~v~~~~l~~~y~~-aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 197 PLPDDDIYSLFAG-CDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred cCCHHHHHHHHHh-CCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccc
Confidence 5677899999995 99999999999999999999999999999999999999999988887753
Q ss_pred ---CCHHHHHHHHHHHHHhccCC--HHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 716 ---YHPDQAAELMADFFGKCKEN--PSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 716 ---~d~~~lA~~I~~~l~~l~~d--p~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
.|.+++++++.+++ .| ++.++++..++.+.+.++|||+. +++.|++++.
T Consensus 276 ~v~~~~~~~~~~ii~~l----~~~~~~~~~~~~~~~~~~~~~~fs~~~--ia~k~~~l~~ 329 (331)
T PHA01630 276 FLDPDIEDAYQKLLEAL----ANWTPEKKKENLEGRAILYRENYSYNA--IAKMWEKILE 329 (331)
T ss_pred ccCCCHHHHHHHHHHHH----hCCCHHHHHHHHHHHHHHHHHhCCHHH--HHHHHHHHHh
Confidence 27788888888777 44 34455555555666679999955 5677887774
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=261.39 Aligned_cols=319 Identities=16% Similarity=0.151 Sum_probs=199.0
Q ss_pred CCCceEEEEcCCCchHHHHHHH-HHcCCcEEEEecCCcccCCCCC---hhhHh-------hhhccccchhhhhHHHHHHh
Q 003987 405 QGFPDFIIGNYSDGNLVASLLA-YKMGITQCTIAHALEKTKYPDS---DIYWK-------KFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 405 ~~kpDIIh~~~~~~~lva~lla-r~~gvp~v~t~H~l~~~k~~~s---~~~~k-------~~~~~y~f~~~~~~e~~a~~ 473 (781)
..++||+|+|.|..+..+..++ +..++|.|+|.|+....++... +++-. .-.....+..+...|..+..
T Consensus 146 ~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred CCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 4689999999999999988888 5578999999999877664211 12211 00111222334456888999
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhh
Q 003987 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 553 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~ 553 (781)
.||.+||+|.......+.. | |. +..+ |||||+|.+.|.+..+..+....-+..|.+.
T Consensus 226 ~Ad~fttVS~it~~E~~~L---------------l----~~--~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f 282 (590)
T cd03793 226 CAHVFTTVSEITAYEAEHL---------------L----KR--KPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEF 282 (590)
T ss_pred hCCEEEECChHHHHHHHHH---------------h----CC--CCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHH
Confidence 9999999999876643322 1 22 1334 9999999999877654332211111222221
Q ss_pred ccCccccccccCCCCCCCCCEEEE-EeeccC-CCChHHHHHHHHHhhc----cCCC---eEEEEEeCcCCCCCCcchH--
Q 003987 554 LFDPEQNDEHVGTLSDRSKPIVFS-MARLDH-VKNMTGLVECYGKNSQ----LREL---VNLVVVAGYIDVNKSKDRE-- 622 (781)
Q Consensus 554 l~~~~~~~~~~g~l~~~~k~iIl~-vGRL~~-~Kgl~~LieA~~~l~~----~~~~---v~LvIVG~g~~~~~~~d~e-- 622 (781)
. ....+.++++ ++++++++| +||+.. .||++.+|+|++++.. ...+ +-|+|+-.+.. +.+.+
T Consensus 283 ~--~~~~~~~~~~--~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~---~~~~~~l 355 (590)
T cd03793 283 V--RGHFYGHYDF--DLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTN---NFNVESL 355 (590)
T ss_pred H--HHHHhhhcCC--CCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccC---CcCHHhh
Confidence 1 1112345665 667777776 799998 9999999999999865 1232 23444433311 00000
Q ss_pred --------HHHHHHH------------------------------------------------------------HHHHH
Q 003987 623 --------EIAEIEK------------------------------------------------------------MHELM 634 (781)
Q Consensus 623 --------e~~~~~~------------------------------------------------------------l~~li 634 (781)
-.+..+. +-..+
T Consensus 356 ~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~ 435 (590)
T cd03793 356 KGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHI 435 (590)
T ss_pred cchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHH
Confidence 0000011 11122
Q ss_pred HHcCCC----Cc--EEEec---cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc----c
Q 003987 635 KTYKLD----GQ--FRWIA---AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP----A 701 (781)
Q Consensus 635 ~elgL~----~~--V~flG---~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~----~ 701 (781)
.+.+|. ++ |.|.+ ..+|++-..+.+.+++. +|+||+||++|+||++++||||||+|||+|+.+|+ .
T Consensus 436 r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g-~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~ 514 (590)
T cd03793 436 RRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRG-CHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME 514 (590)
T ss_pred HHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhh-ceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH
Confidence 222232 22 44444 12233445567778884 99999999999999999999999999999999998 5
Q ss_pred cccccC-CeEEEEC-------CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH-HHHHHhcCcchh
Q 003987 702 EIIEHG-ASGFHID-------PYHPDQAAELMADFFGKCKENPSHWKKISDGGL-KRIYERLVVSSD 759 (781)
Q Consensus 702 EiI~dg-~~G~lv~-------p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~-~~~~~~ysw~~~ 759 (781)
|++.++ ..|..+. +.+.++++++|.+++ .. +.++.+.++++ ++..+.|+|+..
T Consensus 515 E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~----~~-~~r~~~~~r~~~~r~s~~f~W~~~ 576 (590)
T cd03793 515 EHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFC----QL-SRRQRIIQRNRTERLSDLLDWRNL 576 (590)
T ss_pred HHhccCCCceEEEecCCccchHHHHHHHHHHHHHHh----CC-cHHHHHHHHHHHHHHHHhCCHHHH
Confidence 666555 3577776 344556666666554 33 46676666654 344589999776
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-25 Score=245.91 Aligned_cols=342 Identities=13% Similarity=0.116 Sum_probs=230.9
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~ 358 (781)
|||+|++. | .||.+.... +|++.|.++||+|+ ++|..... . ....+.
T Consensus 2 ~~i~i~~~-g------------~gG~~~~~~--------~la~~L~~~g~ev~----vv~~~~~~-~----~~~~~~--- 48 (357)
T PRK00726 2 KKILLAGG-G------------TGGHVFPAL--------ALAEELKKRGWEVL----YLGTARGM-E----ARLVPK--- 48 (357)
T ss_pred cEEEEEcC-c------------chHhhhHHH--------HHHHHHHhCCCEEE----EEECCCch-h----hhcccc---
Confidence 89988863 1 367777777 77888899999999 88764311 0 001111
Q ss_pred CCCeEEEEeccCCCcccccccccccC-chhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEe
Q 003987 359 TEHTHILRVPFRSEKGILRQWISRFD-VWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIA 437 (781)
Q Consensus 359 ~~~~~I~rvp~~~~~~~~~~~isr~~-i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~ 437 (781)
.++++++++.....+. ...++.. .+.++ .....+.+.++ ..+|||||+|.+.+++.+.++++..++|++++.
T Consensus 49 -~g~~~~~~~~~~~~~~--~~~~~l~~~~~~~-~~~~~~~~~ik---~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 121 (357)
T PRK00726 49 -AGIEFHFIPSGGLRRK--GSLANLKAPFKLL-KGVLQARKILK---RFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHE 121 (357)
T ss_pred -CCCcEEEEeccCcCCC--ChHHHHHHHHHHH-HHHHHHHHHHH---hcCCCEEEECCCcchhHHHHHHHHcCCCEEEEc
Confidence 2567888876432110 0000000 11111 11122233333 348999999988777888888888999999876
Q ss_pred cCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003987 438 HALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (781)
Q Consensus 438 H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f 517 (781)
|+.... ....+.++.+|.+++++++... . ..
T Consensus 122 ~~~~~~----------------------~~~r~~~~~~d~ii~~~~~~~~---------------------~------~~ 152 (357)
T PRK00726 122 QNAVPG----------------------LANKLLARFAKKVATAFPGAFP---------------------E------FF 152 (357)
T ss_pred CCCCcc----------------------HHHHHHHHHhchheECchhhhh---------------------c------cC
Confidence 642110 1133567789999998864311 0 12
Q ss_pred CCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHH-HHHHH
Q 003987 518 DPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLV-ECYGK 596 (781)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~Li-eA~~~ 596 (781)
..++.+++||+|.+.+.+.... +++++ +++.++|+++|+....|++..++ +|+.+
T Consensus 153 ~~~i~vi~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~ 208 (357)
T PRK00726 153 KPKAVVTGNPVREEILALAAPP----------------------ARLAG--REGKPTLLVVGGSQGARVLNEAVPEALAL 208 (357)
T ss_pred CCCEEEECCCCChHhhcccchh----------------------hhccC--CCCCeEEEEECCcHhHHHHHHHHHHHHHH
Confidence 6799999999998765442211 12344 45677888999988888876665 89888
Q ss_pred hhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCC
Q 003987 597 NSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676 (781)
Q Consensus 597 l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E 676 (781)
+... + ..++++|+|.. +.+.+..+ +++. |.+.|++ +++..+++. +|++|++|-
T Consensus 209 ~~~~-~-~~~~~~G~g~~-------------~~~~~~~~-~~~~--v~~~g~~------~~~~~~~~~-~d~~i~~~g-- 261 (357)
T PRK00726 209 LPEA-L-QVIHQTGKGDL-------------EEVRAAYA-AGIN--AEVVPFI------DDMAAAYAA-ADLVICRAG-- 261 (357)
T ss_pred hhhC-c-EEEEEcCCCcH-------------HHHHHHhh-cCCc--EEEeehH------hhHHHHHHh-CCEEEECCC--
Confidence 8653 3 56778898853 33444445 6664 9999954 467888885 999999862
Q ss_pred CCcHHHHHHHHcCCcEEEcCccc--------cccccccCCeEEEECCCC--HHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 003987 677 AFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 677 ~fGltvlEAMa~GlPVVaT~~gG--------~~EiI~dg~~G~lv~p~d--~~~lA~~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
+.+++|||+||+|||++..++ ..+.+.++++|+++++.| +++++++|.+++ +|++.+++|++++
T Consensus 262 --~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~ 335 (357)
T PRK00726 262 --ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELL----SDPERLEAMAEAA 335 (357)
T ss_pred --HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHH----cCHHHHHHHHHHH
Confidence 689999999999999987643 246677788999999888 999999998887 8999999999999
Q ss_pred HHHHHHhcCcchhhhccchHHHH
Q 003987 747 LKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 747 ~~~~~~~ysw~~~~il~~ye~ll 769 (781)
++++ +.++- ..+++.|.+++
T Consensus 336 ~~~~-~~~~~--~~~~~~~~~~~ 355 (357)
T PRK00726 336 RALG-KPDAA--ERLADLIEELA 355 (357)
T ss_pred HhcC-CcCHH--HHHHHHHHHHh
Confidence 8876 44533 45666776654
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-24 Score=236.07 Aligned_cols=313 Identities=14% Similarity=0.135 Sum_probs=218.2
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccc
Q 003987 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 380 (781)
Q Consensus 301 ~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~i 380 (781)
+||.+.++. +|++.|.++||+|+ |+|...... .+.. ...++++.++|+....+
T Consensus 9 ~gG~~~~~~--------~la~~l~~~G~ev~----v~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~------ 61 (350)
T cd03785 9 TGGHIFPAL--------ALAEELRERGAEVL----FLGTKRGLE--------ARLV-PKAGIPLHTIPVGGLRR------ 61 (350)
T ss_pred chhhhhHHH--------HHHHHHHhCCCEEE----EEECCCcch--------hhcc-cccCCceEEEEecCcCC------
Confidence 588888877 78888899999999 888753211 0111 11257788887753211
Q ss_pred cccCchhhHH------HHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhh
Q 003987 381 SRFDVWPYLE------TFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKK 454 (781)
Q Consensus 381 sr~~i~~yl~------~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~ 454 (781)
...+..+. .....+.+.++ +.+||+||+|....++.+.++++..++|+++..|+..+ .
T Consensus 62 --~~~~~~~~~~~~~~~~~~~~~~~i~---~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~----------~- 125 (350)
T cd03785 62 --KGSLKKLKAPFKLLKGVLQARKILK---KFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVP----------G- 125 (350)
T ss_pred --CChHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCc----------c-
Confidence 11111111 11122333333 34899999998777777888889999999876553211 0
Q ss_pred hhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCC
Q 003987 455 FDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF 534 (781)
Q Consensus 455 ~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~ 534 (781)
....+.++.+|.|++.|+...+ + ....++.+++||+|.+.+.
T Consensus 126 -----------~~~~~~~~~~~~vi~~s~~~~~--------------------~-------~~~~~~~~i~n~v~~~~~~ 167 (350)
T cd03785 126 -----------LANRLLARFADRVALSFPETAK--------------------Y-------FPKDKAVVTGNPVREEILA 167 (350)
T ss_pred -----------HHHHHHHHhhCEEEEcchhhhh--------------------c-------CCCCcEEEECCCCchHHhh
Confidence 0123456679999999987643 0 1156899999999987665
Q ss_pred CCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHH-HHHHHHHhhccCCCeEE-EEEeCc
Q 003987 535 PYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNL-VVVAGY 612 (781)
Q Consensus 535 p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~-LieA~~~l~~~~~~v~L-vIVG~g 612 (781)
+... + +.+++ ++++++|+++|+....|+... +++++..+.+ +++.+ +++|.+
T Consensus 168 ~~~~---~-------------------~~~~~--~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~g 221 (350)
T cd03785 168 LDRE---R-------------------ARLGL--RPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGKG 221 (350)
T ss_pred hhhh---H-------------------HhcCC--CCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCCc
Confidence 4321 1 23555 566778888887777777765 4588888763 45664 467776
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcE
Q 003987 613 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPT 692 (781)
Q Consensus 613 ~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPV 692 (781)
. .+++++.++++ .++|+|.|++ .++..+|+. +|++|.++- +++++|||+||+||
T Consensus 222 -~------------~~~l~~~~~~~--~~~v~~~g~~------~~~~~~l~~-ad~~v~~sg----~~t~~Eam~~G~Pv 275 (350)
T cd03785 222 -D------------LEEVKKAYEEL--GVNYEVFPFI------DDMAAAYAA-ADLVISRAG----ASTVAELAALGLPA 275 (350)
T ss_pred -c------------HHHHHHHHhcc--CCCeEEeehh------hhHHHHHHh-cCEEEECCC----HhHHHHHHHhCCCE
Confidence 4 45667777766 4789999953 467888885 999998762 68999999999999
Q ss_pred EEcCccc--------cccccccCCeEEEECCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 693 FATCHGG--------PAEIIEHGASGFHIDPY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 693 VaT~~gG--------~~EiI~dg~~G~lv~p~--d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
|+++.++ ..+.+.++++|+++++. |+++++++|.+++ .|++.+++|++++++++
T Consensus 276 v~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 339 (350)
T cd03785 276 ILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELL----SDPERLKAMAEAARSLA 339 (350)
T ss_pred EEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC
Confidence 9987654 35677778899999987 8999999998887 79999999999998876
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-25 Score=253.60 Aligned_cols=315 Identities=14% Similarity=0.073 Sum_probs=211.1
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003987 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 396 ~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
.+..+.... ...|+|+.|.+...+++..+.++. ..|+++..|..++. +.. |..+- ....-...|-.
T Consensus 121 fa~~i~~~~-~~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~----~e~-~~~lp-------~~~~ll~~~l~ 187 (460)
T cd03788 121 FADAIAEVL-RPGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPS----SEI-FRCLP-------WREELLRGLLG 187 (460)
T ss_pred HHHHHHHhc-CCCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCC----hHH-HhhCC-------ChHHHHHHHhc
Confidence 333444432 257999999998877777776553 58999999976542 221 22111 11122345667
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhc
Q 003987 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLL 554 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l 554 (781)
+|.|...+........+.......... . ........|. ..++.++|||+|.+.|.+.......... +.
T Consensus 188 ~D~igF~t~~~~~~Fl~~~~~~l~~~~-~-~~~~i~~~g~---~~~i~vip~GID~~~f~~~~~~~~~~~~----~~--- 255 (460)
T cd03788 188 ADLIGFQTERYARNFLSCCSRLLGLEV-T-DDGGVEYGGR---RVRVGAFPIGIDPDAFRKLAASPEVQER----AA--- 255 (460)
T ss_pred CCEEEECCHHHHHHHHHHHHHHcCCcc-c-CCceEEECCE---EEEEEEEeCeEcHHHHHHHhcCchhHHH----HH---
Confidence 999999887654432222111000000 0 0001111121 3478999999999888654221110000 00
Q ss_pred cCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHHHHHH
Q 003987 555 FDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAEIEKM 630 (781)
Q Consensus 555 ~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~~~~l 630 (781)
+..+. .+++++|+++||+++.||+..+++|++++.+.+|+ ++|+++|++.. ...++..+..+.+
T Consensus 256 -------~~~~~--~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~---g~~~~~~~l~~~l 323 (460)
T cd03788 256 -------ELRER--LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSR---TDVPEYQELRREV 323 (460)
T ss_pred -------HHHHh--cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCC---cCcHHHHHHHHHH
Confidence 01222 35678999999999999999999999998877775 67999986532 1123334555666
Q ss_pred HHHHHHcCCC------CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc----EEEcCcccc
Q 003987 631 HELMKTYKLD------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATCHGGP 700 (781)
Q Consensus 631 ~~li~elgL~------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----VVaT~~gG~ 700 (781)
++++++.+.. ..|++++ ..++.+++..+|+ ++|+||+||..||||++++|||+||+| ||+|+.+|.
T Consensus 324 ~~~v~~in~~~g~~~~~~v~~~~---g~v~~~el~~~y~-~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~ 399 (460)
T cd03788 324 EELVGRINGKFGTLDWTPVRYLY---RSLPREELAALYR-AADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA 399 (460)
T ss_pred HHHHHHHHhccCCCCceeEEEEe---CCCCHHHHHHHHH-hccEEEeCccccccCcccceeEEEecCCCceEEEeccccc
Confidence 7776664321 2355553 1677899999999 499999999999999999999999999 999998888
Q ss_pred ccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcch
Q 003987 701 AEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 701 ~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~ 758 (781)
.+. +.+|++++|+|++++|++|.++++ .+++.++.+++++++.+ .+|||+.
T Consensus 400 ~~~---~~~g~lv~p~d~~~la~ai~~~l~---~~~~e~~~~~~~~~~~v-~~~~~~~ 450 (460)
T cd03788 400 AEE---LSGALLVNPYDIDEVADAIHRALT---MPLEERRERHRKLREYV-RTHDVQA 450 (460)
T ss_pred hhh---cCCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHH
Confidence 877 468999999999999999998873 45688899999999988 6799854
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=237.26 Aligned_cols=224 Identities=12% Similarity=0.123 Sum_probs=164.3
Q ss_pred HHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcch
Q 003987 471 AMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSI 550 (781)
Q Consensus 471 a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i 550 (781)
.|.+.+.+|++|...++.+++ .|++ . .+ +|+||+|.+.|.|........+
T Consensus 89 ~m~~~~~vIavS~~t~~~L~~--------------------~G~~--~-~i-~I~~GVD~~~f~p~~~~~~~~r------ 138 (335)
T PHA01633 89 YLLQDVKFIPNSKFSAENLQE--------------------VGLQ--V-DL-PVFHGINFKIVENAEKLVPQLK------ 138 (335)
T ss_pred HHhcCCEEEeCCHHHHHHHHH--------------------hCCC--C-ce-eeeCCCChhhcCccchhhHHHH------
Confidence 566778899999877653221 2443 2 23 4789999998887542211111
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHH
Q 003987 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 626 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~ 626 (781)
++++.. .++.++|+++||+.+.||++.|++|++++.+..++ ++|+++|++
T Consensus 139 -----------~~~~~~-~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 139 -----------QKLDKD-FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred -----------HHhCcC-CCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 123321 13567899999999999999999999999876654 578887732
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 627 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 627 ~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
..+++++.++|+|+|... .++.+++.++|+. +|+||+||.+|+||++++|||+||+|||+|+.||..|++.+
T Consensus 193 ------~~~~l~l~~~V~f~g~~G-~~~~~dl~~~y~~-aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~ 264 (335)
T PHA01633 193 ------QFTQLEVPANVHFVAEFG-HNSREYIFAFYGA-MDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSW 264 (335)
T ss_pred ------HHHHcCCCCcEEEEecCC-CCCHHHHHHHHHh-CCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCC
Confidence 124567888999996322 4567899999995 99999999999999999999999999999999999987542
Q ss_pred ------------------CCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchH
Q 003987 707 ------------------GASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSP 766 (781)
Q Consensus 707 ------------------g~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye 766 (781)
...||.+++.|++++|++|..+++. .+++. .+.++++++ ++|+|++ +.+.|+
T Consensus 265 ~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~--~~~~~---~~~~~~~~a-~~f~~~~--~~~~~~ 334 (335)
T PHA01633 265 QWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL--QDREE---RSMKLKELA-KKYDIRN--LYTRFL 334 (335)
T ss_pred ccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc--cChhh---hhHHHHHHH-HhcCHHH--HHHHhh
Confidence 2358899999999999999987631 34433 366777777 8999954 555554
|
|
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-24 Score=235.17 Aligned_cols=305 Identities=15% Similarity=0.145 Sum_probs=204.4
Q ss_pred HHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhH---HHHHH
Q 003987 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYL---ETFTE 394 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl---~~f~~ 394 (781)
.|+++|.++||+|+ ++|+..... ... ....++++.+++.....+ .+....++.. .....
T Consensus 19 ~La~~L~~~g~eV~----vv~~~~~~~------~~~---~~~~g~~~~~i~~~~~~~-----~~~~~~l~~~~~~~~~~~ 80 (348)
T TIGR01133 19 AVAEELIKRGVEVL----WLGTKRGLE------KRL---VPKAGIEFYFIPVGGLRR-----KGSFRLIKTPLKLLKAVF 80 (348)
T ss_pred HHHHHHHhCCCEEE----EEeCCCcch------hcc---cccCCCceEEEeccCcCC-----CChHHHHHHHHHHHHHHH
Confidence 67888999999999 887632110 000 011257777777654211 0011111111 11222
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
.+.+.+++ .+||+||+|....++.+.++++..++|+|+..|+... . ..+.+..+.
T Consensus 81 ~l~~~i~~---~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~-----------------~-----~~~~~~~~~ 135 (348)
T TIGR01133 81 QARRILKK---FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP-----------------G-----LTNKLLSRF 135 (348)
T ss_pred HHHHHHHh---cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc-----------------c-----HHHHHHHHH
Confidence 33333433 4899999998777777888888899999754332110 0 013356678
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhc
Q 003987 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLL 554 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l 554 (781)
+|.+++.|+...+ | -+..+|+||+|...+.+....
T Consensus 136 ~d~ii~~~~~~~~--------~----------------------~~~~~i~n~v~~~~~~~~~~~--------------- 170 (348)
T TIGR01133 136 AKKVLISFPGAKD--------H----------------------FEAVLVGNPVRQEIRSLPVPR--------------- 170 (348)
T ss_pred hCeeEECchhHhh--------c----------------------CCceEEcCCcCHHHhcccchh---------------
Confidence 9999999986643 0 133689999987655432110
Q ss_pred cCccccccccCCCCCCCCCEEEEEeeccCCCChHH-HHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHH
Q 003987 555 FDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (781)
Q Consensus 555 ~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~-LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~l 633 (781)
+.+++ ++++++|+++|+....|++.. ++++++++.+. ++++++++++.+ .+.+++.
T Consensus 171 -------~~~~~--~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~------------~~~l~~~ 227 (348)
T TIGR01133 171 -------ERFGL--REGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKND------------LEKVKNV 227 (348)
T ss_pred -------hhcCC--CCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcch------------HHHHHHH
Confidence 12455 456788999998888888765 55888887653 466655544433 3567777
Q ss_pred HHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc-------ccccccc
Q 003987 634 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG-------PAEIIEH 706 (781)
Q Consensus 634 i~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG-------~~EiI~d 706 (781)
++++++.+.+.|.. . ++..+|+ ++|++|.+| + |++++|||+||+|+|+++.+| ..+++.+
T Consensus 228 ~~~~~l~~~v~~~~-------~-~~~~~l~-~ad~~v~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~ 294 (348)
T TIGR01133 228 YQELGIEAIVTFID-------E-NMAAAYA-AADLVISRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED 294 (348)
T ss_pred HhhCCceEEecCcc-------c-CHHHHHH-hCCEEEECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH
Confidence 88888765555552 1 5677888 499999875 2 789999999999999997654 2357888
Q ss_pred CCeEEEECCCC--HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 707 GASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 707 g~~G~lv~p~d--~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
+++|++++++| +++++++|.+++ +||+.+++|++++++++
T Consensus 295 ~~~G~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 336 (348)
T TIGR01133 295 LGAGLVIRQKELLPEKLLEALLKLL----LDPANLEAMAEAARKLA 336 (348)
T ss_pred CCCEEEEecccCCHHHHHHHHHHHH----cCHHHHHHHHHHHHhcC
Confidence 99999999886 999999998877 89999999999998766
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-24 Score=243.46 Aligned_cols=319 Identities=16% Similarity=0.141 Sum_probs=214.4
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.++..+.+.. ..-|+|..|...-.+++.++.++. ..++.+..|..++. ++++.. +.....-+..|-
T Consensus 116 ~fA~~i~~~~-~~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~----~e~f~~--------lp~r~~il~gll 182 (456)
T TIGR02400 116 LFAEALAPLL-QPGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPS----SEIYRT--------LPWRRELLEGLL 182 (456)
T ss_pred HHHHHHHHhC-CCCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCC----hHHHhh--------CCcHHHHHHHHh
Confidence 3444444443 245899999999888888887765 46788899965442 222211 111223445788
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHH---HHHhhhhcch
Q 003987 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSI 550 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~---~r~~~~~~~i 550 (781)
.||.|...|+..+..+.....+..... ..++ .+..+- -..++.++|||+|.+.|.+..... .+...+
T Consensus 183 ~~dligF~t~~~~~~Fl~~~~~~l~~~--~~~~--~~~~~g--~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~l---- 252 (456)
T TIGR02400 183 AYDLVGFQTYDDARNFLSAVSRELGLE--TLPN--GVESGG--RTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAEL---- 252 (456)
T ss_pred cCCEEEECCHHHHHHHHHHHHHHhCCc--ccCC--ceEECC--cEEEEEEecCcCCHHHHHHHhcChhHHHHHHHH----
Confidence 999999999988765544332211000 0000 001111 134788999999999886643211 111110
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHH
Q 003987 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 626 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~ 626 (781)
++.+ +++++|+++||+++.||+..+++|++++.+.+|+ +.|+++|+... ...+++...
T Consensus 253 ----------r~~~-----~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~r---g~~~~~~~l 314 (456)
T TIGR02400 253 ----------RESL-----KGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSR---GDVPEYQQL 314 (456)
T ss_pred ----------HHHc-----CCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCc---cCchHHHHH
Confidence 1112 3577999999999999999999999998777665 56888864321 111222233
Q ss_pred HHHHHHHHHHcC-CCCc-----EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc----EEEcC
Q 003987 627 IEKMHELMKTYK-LDGQ-----FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFATC 696 (781)
Q Consensus 627 ~~~l~~li~elg-L~~~-----V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----VVaT~ 696 (781)
.+.+++++.+.+ ..+. |++++ ..++.+++..+|+ ++|+||+||..||||++++||||||+| +|+|+
T Consensus 315 ~~~i~~lv~~in~~~~~~~~~pv~~l~---~~~~~~el~aly~-aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~ 390 (456)
T TIGR02400 315 RRQVEELVGRINGRFGTLDWTPIRYLN---RSYDREELMALYR-AADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSE 390 (456)
T ss_pred HHHHHHHHHHHHhccCCCCCccEEEEc---CCCCHHHHHHHHH-hCcEEEECccccccCccHHHHHHhcCCCCceEEEeC
Confidence 344444433221 1111 45544 2677899999999 599999999999999999999999999 99999
Q ss_pred ccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHH
Q 003987 697 HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPF 767 (781)
Q Consensus 697 ~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ 767 (781)
.+|..+.+. +|++++|.|++++|++|.++++ .+++.++++.+++++++ .+||+ ..+++.|..
T Consensus 391 ~~G~~~~l~---~gllVnP~d~~~lA~aI~~aL~---~~~~er~~r~~~~~~~v-~~~~~--~~W~~~~l~ 452 (456)
T TIGR02400 391 FAGAAQELN---GALLVNPYDIDGMADAIARALT---MPLEEREERHRAMMDKL-RKNDV--QRWREDFLS 452 (456)
T ss_pred CCCChHHhC---CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCH--HHHHHHHHH
Confidence 999888873 7999999999999999998873 57889999999999998 56888 445555544
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-23 Score=235.88 Aligned_cols=272 Identities=14% Similarity=0.138 Sum_probs=186.5
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHH
Q 003987 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (781)
Q Consensus 407 kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (781)
+||+||++..+........+++.|+|++++-|.+... +...|+.+ . ......++.+|.|++.|....
T Consensus 124 ~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~----s~~~~~~~-------~--~~~r~~~~~~d~ii~~S~~~~ 190 (425)
T PRK05749 124 RPKLVIIMETELWPNLIAELKRRGIPLVLANARLSER----SFKRYQKF-------K--RFYRLLFKNIDLVLAQSEEDA 190 (425)
T ss_pred CCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChh----hHHHHHHH-------H--HHHHHHHHhCCEEEECCHHHH
Confidence 8999998865543333345678899999876644221 11111111 1 123357889999999998876
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCC
Q 003987 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 566 (781)
Q Consensus 487 ~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~ 566 (781)
+...+ .|++ .. +.+++|+ +.+.+.+....... .. .++.++
T Consensus 191 ~~l~~--------------------~g~~--~~-i~vi~n~-~~d~~~~~~~~~~~-~~--------------~r~~~~- 230 (425)
T PRK05749 191 ERFLA--------------------LGAK--NE-VTVTGNL-KFDIEVPPELAARA-AT--------------LRRQLA- 230 (425)
T ss_pred HHHHH--------------------cCCC--CC-cEecccc-cccCCCChhhHHHH-HH--------------HHHHhc-
Confidence 52211 1332 44 7788874 33333222111110 00 012233
Q ss_pred CCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003987 567 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 567 l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~fl 646 (781)
+++++++++|+. .|+.+.+++|+.++.+..|+++|+|+|+|+. ..++++++++++|+. .+.|.
T Consensus 231 ---~~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~-----------r~~~l~~~~~~~gl~-~~~~~ 293 (425)
T PRK05749 231 ---PNRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPE-----------RFKEVEELLKKAGLS-YVRRS 293 (425)
T ss_pred ---CCCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChh-----------hHHHHHHHHHhCCCc-EEEcc
Confidence 356788888764 6889999999999887789999999999875 125788889999885 35555
Q ss_pred ccccCc--------CChHHHHHHHHccCcEEE-EcCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccC-CeEEEECC
Q 003987 647 AAQTNR--------ARNGELYRYIADTKGAFV-QPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHG-ASGFHIDP 715 (781)
Q Consensus 647 G~~~~~--------v~~~el~~~la~aadvfV-~PS~~E~fGltvlEAMa~GlPVVaT~~-gG~~EiI~dg-~~G~lv~p 715 (781)
|..... -..+++..+|+. +|+++ .||..|++|.+++|||+||+|||++.. ++..|+++.. .+|+++++
T Consensus 294 ~~~~~~~~~~v~l~~~~~el~~~y~~-aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~ 372 (425)
T PRK05749 294 QGEPPSADTDVLLGDTMGELGLLYAI-ADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQV 372 (425)
T ss_pred CCCCCCCCCcEEEEecHHHHHHHHHh-CCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEE
Confidence 421100 024689999995 99954 478889999999999999999999854 6677766553 46888889
Q ss_pred CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Q 003987 716 YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753 (781)
Q Consensus 716 ~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ 753 (781)
+|+++++++|.+++ +||+.+++|+++|++.+.++
T Consensus 373 ~d~~~La~~l~~ll----~~~~~~~~m~~~a~~~~~~~ 406 (425)
T PRK05749 373 EDAEDLAKAVTYLL----TDPDARQAYGEAGVAFLKQN 406 (425)
T ss_pred CCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhC
Confidence 99999999998887 89999999999999999654
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-23 Score=206.12 Aligned_cols=160 Identities=28% Similarity=0.482 Sum_probs=144.1
Q ss_pred CCCCCEEEEEeeccCCCChHHHHHHHHHhhcc-CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003987 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (781)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~-~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG 647 (781)
+.++++|+++||+++.||++.+++++..+.+. .+++.|+|+|.+.. ...+...++.+++.++|+|+|
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~------------~~~~~~~~~~~~~~~~i~~~~ 79 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY------------KKELKNLIEKLNLKENIIFLG 79 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH------------HHHHHHHHHHTTCGTTEEEEE
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc------------ccccccccccccccccccccc
Confidence 56788999999999999999999999999763 68899999996644 677889999999999999999
Q ss_pred cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHH
Q 003987 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMAD 727 (781)
Q Consensus 648 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~ 727 (781)
..+.+++..++.. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++++.|+++++++|..
T Consensus 80 ----~~~~~~l~~~~~~-~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~~ 154 (172)
T PF00534_consen 80 ----YVPDDELDELYKS-SDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIEK 154 (172)
T ss_dssp ----SHSHHHHHHHHHH-TSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHHH
T ss_pred ----ccccccccccccc-ceeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHHH
Confidence 5557799999995 99999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHhccCCHHHHHHHHHHHHHH
Q 003987 728 FFGKCKENPSHWKKISDGGLKR 749 (781)
Q Consensus 728 ~l~~l~~dp~~~~~~s~~a~~~ 749 (781)
++ .+++.++.|+++|++|
T Consensus 155 ~l----~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 155 LL----NDPELRQKLGKNARER 172 (172)
T ss_dssp HH----HHHHHHHHHHHHHHHH
T ss_pred HH----CCHHHHHHHHHHhcCC
Confidence 88 7899999999999875
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.4e-22 Score=239.12 Aligned_cols=321 Identities=13% Similarity=0.118 Sum_probs=212.7
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.++..+.+... .-|+|-.|.+...+++..+.++. ..++.+..|..++.. .++. -+.....-+..|-
T Consensus 136 ~FA~~i~~~~~-~~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~----e~fr--------~lp~r~~il~gll 202 (797)
T PLN03063 136 MFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSS----EIYK--------TLPSRSELLRAVL 202 (797)
T ss_pred HHHHHHHHhcC-CCCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCH----HHHh--------hCCCHHHHHHHHh
Confidence 34444444432 34899999999888877777664 688999999765532 2221 1111123345788
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHH---HHHHhhhhcch
Q 003987 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK---QKRLTALHGSI 550 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~---~~r~~~~~~~i 550 (781)
.||.|-+.|+..+..+.+......... .+..++ ...|- ..++.++|||||.+.|.+.... ..+...+
T Consensus 203 ~aDligF~t~~y~r~Fl~~~~r~l~~~-~~~~~i--~~~gr---~~~I~viP~GID~~~f~~~~~~~~~~~~~~~l---- 272 (797)
T PLN03063 203 TADLIGFHTYDFARHFLSACTRILGVE-GTHEGV--VDQGK---VTRVAVFPIGIDPERFINTCELPEVKQHMKEL---- 272 (797)
T ss_pred cCCEEEeCCHHHHHHHHHHHHHHhCcc-ccCCce--EECCe---EEEEEEEecccCHHHHHHHhcChhHHHHHHHH----
Confidence 899999999877654333221110000 000110 01111 3478899999999887653221 1111100
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCe----EEEEEeCcCCCCCCcchHHHHH
Q 003987 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELV----NLVVVAGYIDVNKSKDREEIAE 626 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v----~LvIVG~g~~~~~~~d~ee~~~ 626 (781)
++. ..++++|+++||+++.||+..+++||+++.+.+|++ .|++++.... ... .+
T Consensus 273 ----------r~~-----~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr---~~~----~~ 330 (797)
T PLN03063 273 ----------KRF-----FAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTR---NDV----PE 330 (797)
T ss_pred ----------HHh-----cCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCC---Cch----HH
Confidence 011 135789999999999999999999999998877765 3554443211 111 22
Q ss_pred HHHHHHHHHHcC--CC---CcEEEecc--ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc----EEEc
Q 003987 627 IEKMHELMKTYK--LD---GQFRWIAA--QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFAT 695 (781)
Q Consensus 627 ~~~l~~li~elg--L~---~~V~flG~--~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----VVaT 695 (781)
.+.+++.++++. +. +.+.|.+. ....++.+++..+|+ ++|+||+||.+||||++++||||||+| +|+|
T Consensus 331 y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~-~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlS 409 (797)
T PLN03063 331 YQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYA-ITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLS 409 (797)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHH-hCCEEEeCccccccCcchhhHheeecCCCCCEEee
Confidence 344455555442 22 22333331 113678899999999 599999999999999999999999999 9999
Q ss_pred CccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 696 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 696 ~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
..+|.++.+ +.+|++++|.|++++|++|.++++ .+++.+++..+.+++++ .++||.. +++.+.+.+
T Consensus 410 e~~G~~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~v-~~~~~~~--Wa~~fl~~l 475 (797)
T PLN03063 410 EFAGAGQSL--GAGALLVNPWNITEVSSAIKEALN---MSDEERETRHRHNFQYV-KTHSAQK--WADDFMSEL 475 (797)
T ss_pred CCcCchhhh--cCCeEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHHhh-hhCCHHH--HHHHHHHHH
Confidence 999999976 567999999999999999998883 48889999999999988 7789954 445544444
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-21 Score=217.00 Aligned_cols=261 Identities=12% Similarity=0.077 Sum_probs=173.5
Q ss_pred CCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHH
Q 003987 406 GFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 406 ~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
.+||+||++++..++.....++..++|++++.++....+ .++.+.+|.++++|+..
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~------------------------~~~~~~ad~i~~~s~~~ 158 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK------------------------IWVHREVDRYFVATDHV 158 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc------------------------ccccCCCCEEEECCHHH
Confidence 489999998776655444444456799886665432110 12456899999999876
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccC
Q 003987 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (781)
Q Consensus 486 ~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g 565 (781)
.+.+. ..|++ ..|+.++.+.++.....+..... . ++++|
T Consensus 159 ~~~l~--------------------~~gi~--~~ki~v~G~p~~~~f~~~~~~~~--~-----------------~~~~~ 197 (380)
T PRK13609 159 KKVLV--------------------DIGVP--PEQVVETGIPIRSSFELKINPDI--I-----------------YNKYQ 197 (380)
T ss_pred HHHHH--------------------HcCCC--hhHEEEECcccChHHcCcCCHHH--H-----------------HHHcC
Confidence 54211 12443 66888876655432211111111 1 13466
Q ss_pred CCCCCCCCE-EEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003987 566 TLSDRSKPI-VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 566 ~l~~~~k~i-Il~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~ 644 (781)
+ ++++++ +++.|++...||+..+++++.+. ++++++++|++.. ...+++++++++++ ++|+
T Consensus 198 l--~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~----------~~~~~l~~~~~~~~--~~v~ 259 (380)
T PRK13609 198 L--CPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNE----------ALKQSLEDLQETNP--DALK 259 (380)
T ss_pred C--CCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCH----------HHHHHHHHHHhcCC--CcEE
Confidence 6 445554 55668898899999999987642 5789988865432 23456777776655 6899
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-cccc----ccccccCCeEEEECCCCHH
Q 003987 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGP----AEIIEHGASGFHIDPYHPD 719 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~-~gG~----~EiI~dg~~G~lv~p~d~~ 719 (781)
|+|++. ++..+++ ++|++|. ++.|++++|||+||+|||+++ .+|. .+.+.+ +|+.+.+.|++
T Consensus 260 ~~g~~~------~~~~l~~-~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~ 326 (380)
T PRK13609 260 VFGYVE------NIDELFR-VTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDE 326 (380)
T ss_pred EEechh------hHHHHHH-hccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHH
Confidence 999643 4677888 5999885 456999999999999999985 5553 223432 35555567999
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
+++++|.+++ .|++.+++|++++++.. ..++++ .+++.+.+++
T Consensus 327 ~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~~--~i~~~i~~~~ 369 (380)
T PRK13609 327 EVFAKTEALL----QDDMKLLQMKEAMKSLY-LPEPAD--HIVDDILAEN 369 (380)
T ss_pred HHHHHHHHHH----CCHHHHHHHHHHHHHhC-CCchHH--HHHHHHHHhh
Confidence 9999998887 89999999999887755 556664 4555555544
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.7e-20 Score=206.42 Aligned_cols=264 Identities=11% Similarity=0.025 Sum_probs=170.7
Q ss_pred CCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003987 405 QGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 405 ~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
+.+.+|++.+.+....+ ++...+.++|+.+++.......... .. ...+..+++.||.|+|+|..
T Consensus 100 ~~~~~i~~~~~P~~~~~---~~~~~~~~~Vyd~~D~~~~~~~~~~----~~---------~~~e~~~~~~ad~vi~~S~~ 163 (373)
T cd04950 100 GFGRPILWYYTPYTLPV---AALLQASLVVYDCVDDLSAFPGGPP----EL---------LEAERRLLKRADLVFTTSPS 163 (373)
T ss_pred CCCCcEEEEeCccHHHH---HhhcCCCeEEEEcccchhccCCCCH----HH---------HHHHHHHHHhCCEEEECCHH
Confidence 55566666665444332 3335678899998875432211100 00 03466789999999999987
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003987 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 485 ~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (781)
..+..+ .. .+++.+||||+|.+.|.+........ +.
T Consensus 164 l~~~~~----------------------~~---~~~i~~i~ngvd~~~f~~~~~~~~~~-----------------~~-- 199 (373)
T cd04950 164 LYEAKR----------------------RL---NPNVVLVPNGVDYEHFAAARDPPPPP-----------------AD-- 199 (373)
T ss_pred HHHHHh----------------------hC---CCCEEEcccccCHHHhhcccccCCCh-----------------hH--
Confidence 654111 01 36899999999998886643211000 00
Q ss_pred CCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003987 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~ 644 (781)
....++++|+|+|++++.++++.+.++++ ..|+++|+++|++... .... ++...++|+
T Consensus 200 --~~~~~~~~i~y~G~l~~~~d~~ll~~la~----~~p~~~~vliG~~~~~------------~~~~----~~~~~~nV~ 257 (373)
T cd04950 200 --LAALPRPVIGYYGAIAEWLDLELLEALAK----ARPDWSFVLIGPVDVS------------IDPS----ALLRLPNVH 257 (373)
T ss_pred --HhcCCCCEEEEEeccccccCHHHHHHHHH----HCCCCEEEEECCCcCc------------cChh----HhccCCCEE
Confidence 01346789999999999888765555443 3478999999998320 0111 111247899
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCC-----CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHH
Q 003987 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFY-----EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPD 719 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~-----E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~ 719 (781)
|+| .++.+++..+++. +|++++|+.. +++|++++||||||+|||+|+.++. +..+..+++ .++|++
T Consensus 258 ~~G----~~~~~~l~~~l~~-~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~---~~~~~~~~~-~~~d~~ 328 (373)
T cd04950 258 YLG----PKPYKELPAYLAG-FDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV---RRYEDEVVL-IADDPE 328 (373)
T ss_pred EeC----CCCHHHHHHHHHh-CCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH---HhhcCcEEE-eCCCHH
Confidence 999 6778999999995 9999999853 4689999999999999999986544 444444444 456999
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHH
Q 003987 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFV 768 (781)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~l 768 (781)
+++++|.+++. .+.....+ .+.+ +.+.|||++. ++.+++.
T Consensus 329 ~~~~ai~~~l~---~~~~~~~~---~~~~-~~~~~sW~~~--a~~~~~~ 368 (373)
T cd04950 329 EFVAAIEKALL---EDGPARER---RRLR-LAAQNSWDAR--AAEMLEA 368 (373)
T ss_pred HHHHHHHHHHh---cCCchHHH---HHHH-HHHHCCHHHH--HHHHHHH
Confidence 99999988652 22222111 2222 5688999754 3444433
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.1e-20 Score=189.09 Aligned_cols=121 Identities=31% Similarity=0.504 Sum_probs=103.1
Q ss_pred EEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChH
Q 003987 577 SMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNG 656 (781)
Q Consensus 577 ~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~ 656 (781)
++|++.+.||++.+++++..+.+..++++++++|++.+ .......+.+++..++|.++|... +.+
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~------------~~~~~~~~~~~~~~~~v~~~~~~~---~~~ 173 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPE------------REYLEELLAALLLLDRVIFLGGLD---PEE 173 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCC------------hHHHHHHHHhcCCcccEEEeCCCC---cHH
Confidence 99999999999999999999988888999999999976 334444466778889999999431 234
Q ss_pred HHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEE
Q 003987 657 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI 713 (781)
Q Consensus 657 el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv 713 (781)
++..+++ .+|+++.|+..|++|++++|||+||+|||+|+.++..|++.++.+|+++
T Consensus 174 ~~~~~~~-~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 174 LLALLLA-AADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHHHhh-cCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 4444444 5999999999999999999999999999999999999999999999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.9e-21 Score=228.28 Aligned_cols=321 Identities=15% Similarity=0.104 Sum_probs=211.0
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.++..+.+..+ .-|+|..|.+...+++..+.++. ..++.+..|..++.. .++.. +.....-...|-
T Consensus 122 ~fA~~~~~~~~-~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~~----~~f~~--------lp~~~~ll~~ll 188 (726)
T PRK14501 122 RFAEAIAAIAR-PGDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSF----EVFRL--------LPWREEILEGLL 188 (726)
T ss_pred HHHHHHHHhcC-CCCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCCh----HHHhh--------CCChHHHHHHHh
Confidence 34444444432 35899999999888888886664 578889999766532 22221 111123345788
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHH---HHHhhhhcch
Q 003987 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQ---KRLTALHGSI 550 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~---~r~~~~~~~i 550 (781)
.+|.|-..|......+.+...+..... +-.+ .....|- ..++.++|||+|.+.|.+..... .+...+
T Consensus 189 ~~Dligf~t~~~~r~Fl~~~~~~l~~~--~~~~-~~~~~gr---~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~l---- 258 (726)
T PRK14501 189 GADLIGFHTYDYVRHFLSSVLRVLGYE--TELG-EIRLGGR---IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRL---- 258 (726)
T ss_pred cCCeEEeCCHHHHHHHHHHHHHHcCCc--cCCC-eEEECCE---EEEEEEEECeEcHHHHHHHhcCchHHHHHHHH----
Confidence 899999988876554333222111000 0000 1111121 23688999999999887643211 111100
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHHHH
Q 003987 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEIAE 626 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~~~ 626 (781)
++. .+++++|+++||+++.||+..+++|++++.+.+|+ ++|+++|.+.. ..-++..+.
T Consensus 259 ----------r~~-----~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr---~~~~~~~~l 320 (726)
T PRK14501 259 ----------RQD-----LRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSR---TGVPQYQEM 320 (726)
T ss_pred ----------HHH-----cCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCC---cchHHHHHH
Confidence 011 24577999999999999999999999998877775 78999985422 001233344
Q ss_pred HHHHHHHHHHcC----C---CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHc-----CCcEEE
Q 003987 627 IEKMHELMKTYK----L---DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTC-----GLPTFA 694 (781)
Q Consensus 627 ~~~l~~li~elg----L---~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~-----GlPVVa 694 (781)
.+.+.+++.+.+ . .+-+.+.| .++.+++..+|+ ++|+||+||..||||++++||||| |.||++
T Consensus 321 ~~~~~~~v~~in~~~~~~~~~pv~~~~~----~~~~~~l~~ly~-~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls 395 (726)
T PRK14501 321 KREIDELVGRINGEFGTVDWTPIHYFYR----SLPFEELVALYR-AADVALVTPLRDGMNLVAKEYVASRTDGDGVLILS 395 (726)
T ss_pred HHHHHHHHHHHHhhcCCCCcceEEEEeC----CCCHHHHHHHHH-hccEEEecccccccCcccceEEEEcCCCCceEEEe
Confidence 455555555432 1 12234555 678899999999 599999999999999999999999 557777
Q ss_pred cCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003987 695 TCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 695 T~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
+..|+..+++ .|++++|.|++++|++|.+++. .+++.+.+..+++++++ .+|||+. +++.|.+.+..
T Consensus 396 ~~~G~~~~l~----~~llv~P~d~~~la~ai~~~l~---~~~~e~~~r~~~~~~~v-~~~~~~~--w~~~~l~~l~~ 462 (726)
T PRK14501 396 EMAGAAAELA----EALLVNPNDIEGIAAAIKRALE---MPEEEQRERMQAMQERL-RRYDVHK--WASDFLDELRE 462 (726)
T ss_pred cccchhHHhC----cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHHH--HHHHHHHHHHH
Confidence 7788888875 4899999999999999998872 33455566667788888 6899955 44555555543
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.2e-20 Score=205.30 Aligned_cols=247 Identities=14% Similarity=0.149 Sum_probs=169.9
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHH-----cCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEE
Q 003987 406 GFPDFIIGNYSDG-NLVASLLAYK-----MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII 479 (781)
Q Consensus 406 ~kpDIIh~~~~~~-~lva~llar~-----~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~II 479 (781)
.+||+||++++.. ...+..+++. .++|++++++++.... . .+..+.+|.++
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~--------------~---------~w~~~~~d~~~ 155 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH--------------P---------TWFHKGVTRCF 155 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC--------------c---------ccccCCCCEEE
Confidence 4899999977553 2222333322 4789888776542100 0 12456899999
Q ss_pred ecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccc
Q 003987 480 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 559 (781)
Q Consensus 480 t~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~ 559 (781)
++|+...+.+. ..|++ .+|+.++++++|.+.+.+......
T Consensus 156 ~~s~~~~~~l~--------------------~~g~~--~~ki~v~g~~v~~~f~~~~~~~~~------------------ 195 (382)
T PLN02605 156 CPSEEVAKRAL--------------------KRGLE--PSQIRVYGLPIRPSFARAVRPKDE------------------ 195 (382)
T ss_pred ECCHHHHHHHH--------------------HcCCC--HHHEEEECcccCHhhccCCCCHHH------------------
Confidence 99987654211 12444 679999999998765443322211
Q ss_pred cccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh----ccCCCeE-EEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003987 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS----QLRELVN-LVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 560 ~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~----~~~~~v~-LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
.++.+|+ ++++++|+++|+....|++..+++++.... ...++.+ ++++|.+.. ..+.+++.
T Consensus 196 ~r~~~gl--~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~-----------~~~~L~~~- 261 (382)
T PLN02605 196 LRRELGM--DEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK-----------LQSKLESR- 261 (382)
T ss_pred HHHHcCC--CCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH-----------HHHHHHhh-
Confidence 1244777 677899999999999999999999997653 1135565 556665521 12333332
Q ss_pred HHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc------cccccccccCC
Q 003987 635 KTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH------GGPAEIIEHGA 708 (781)
Q Consensus 635 ~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~------gG~~EiI~dg~ 708 (781)
....+|+|+|+++ ++..+|+ ++|++|.++ .|+|++|||+||+|+|+|+. |+. +.+.+++
T Consensus 262 ---~~~~~v~~~G~~~------~~~~l~~-aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g 326 (382)
T PLN02605 262 ---DWKIPVKVRGFVT------NMEEWMG-ACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNG 326 (382)
T ss_pred ---cccCCeEEEeccc------cHHHHHH-hCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCC
Confidence 2345799999653 5888888 599999865 48999999999999999983 444 3444555
Q ss_pred eEEEECCCCHHHHHHHHHHHHHhccCC-HHHHHHHHHHHHHHH
Q 003987 709 SGFHIDPYHPDQAAELMADFFGKCKEN-PSHWKKISDGGLKRI 750 (781)
Q Consensus 709 ~G~lv~p~d~~~lA~~I~~~l~~l~~d-p~~~~~~s~~a~~~~ 750 (781)
.|+.+ .|+++++++|.+++ .| ++.+++|++++++++
T Consensus 327 ~g~~~--~~~~~la~~i~~ll----~~~~~~~~~m~~~~~~~~ 363 (382)
T PLN02605 327 FGAFS--ESPKEIARIVAEWF----GDKSDELEAMSENALKLA 363 (382)
T ss_pred ceeec--CCHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhc
Confidence 67654 79999999998887 66 999999999998877
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.2e-19 Score=197.96 Aligned_cols=276 Identities=14% Similarity=0.140 Sum_probs=181.3
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
.+.+.+.+ .+||+||++.+.+++.....++..++|+++..++..... . +..+.
T Consensus 95 ~l~~~l~~---~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~~------~------------------w~~~~ 147 (391)
T PRK13608 95 KLINLLIK---EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLHK------N------------------WITPY 147 (391)
T ss_pred HHHHHHHH---hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCccc------c------------------cccCC
Confidence 34444444 499999998666543333333445899865544321100 0 23457
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhc
Q 003987 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLL 554 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l 554 (781)
+|.+++.|+.....+ ...|++ ..|+.++.++++.....+......
T Consensus 148 ~d~~~v~s~~~~~~l--------------------~~~gi~--~~ki~v~GiPv~~~f~~~~~~~~~------------- 192 (391)
T PRK13608 148 STRYYVATKETKQDF--------------------IDVGID--PSTVKVTGIPIDNKFETPIDQKQW------------- 192 (391)
T ss_pred CCEEEECCHHHHHHH--------------------HHcCCC--HHHEEEECeecChHhcccccHHHH-------------
Confidence 999999998765521 112444 678888877776443222221111
Q ss_pred cCccccccccCCCCCCCCCE-EEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHH
Q 003987 555 FDPEQNDEHVGTLSDRSKPI-VFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHEL 633 (781)
Q Consensus 555 ~~~~~~~~~~g~l~~~~k~i-Il~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~l 633 (781)
+.++|+ ++++++ +++.|+++..||+..+++++.+ ..+++++++++++.. +...++
T Consensus 193 ------~~~~~l--~~~~~~ilv~~G~lg~~k~~~~li~~~~~---~~~~~~~vvv~G~~~-------------~l~~~l 248 (391)
T PRK13608 193 ------LIDNNL--DPDKQTILMSAGAFGVSKGFDTMITDILA---KSANAQVVMICGKSK-------------ELKRSL 248 (391)
T ss_pred ------HHHcCC--CCCCCEEEEECCCcccchhHHHHHHHHHh---cCCCceEEEEcCCCH-------------HHHHHH
Confidence 123566 445554 5678999999999999998632 335788887765432 112233
Q ss_pred HHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-ccc----cccccccCC
Q 003987 634 MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGG----PAEIIEHGA 708 (781)
Q Consensus 634 i~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~-~gG----~~EiI~dg~ 708 (781)
.+.++..++|.++|++ +++..+|+ ++|++|. ++.|+|+.|||+||+|+|+++ .+| ....+.+.+
T Consensus 249 ~~~~~~~~~v~~~G~~------~~~~~~~~-~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G 317 (391)
T PRK13608 249 TAKFKSNENVLILGYT------KHMNEWMA-SSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKG 317 (391)
T ss_pred HHHhccCCCeEEEecc------chHHHHHH-hhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCC
Confidence 3344555789999964 35788888 4999997 356999999999999999996 333 222344555
Q ss_pred eEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhcCCCC
Q 003987 709 SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVISMPT 776 (781)
Q Consensus 709 ~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~~~~~ 776 (781)
.|+.. .|+++++++|.+++ +|++.+++|++++++.. +.|+| ..+++.|.+++..++.++
T Consensus 318 ~g~~~--~~~~~l~~~i~~ll----~~~~~~~~m~~~~~~~~-~~~s~--~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 318 FGKIA--DTPEEAIKIVASLT----NGNEQLTNMISTMEQDK-IKYAT--QTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred cEEEe--CCHHHHHHHHHHHh----cCHHHHHHHHHHHHHhc-CCCCH--HHHHHHHHHHhhhhhhhh
Confidence 66654 58999999998887 89999999999999876 56877 556777888776655444
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.6e-18 Score=181.19 Aligned_cols=289 Identities=22% Similarity=0.287 Sum_probs=205.3
Q ss_pred ceEEEEcCCCchH---HHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003987 408 PDFIIGNYSDGNL---VASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 408 pDIIh~~~~~~~l---va~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
+|+++.+...... .........+.+.+...|....................+.+. .......+.++.+++.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 160 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLK---RLKKALRLLADRVIAVSPA 160 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHHH---HHHHhccccccEEEECCHH
Confidence 5999987765533 455566667888888888765433211111110000000000 0011111247778888765
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003987 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 485 ~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (781)
.....+. ... ..++.+++|+++.+.+.+.. .
T Consensus 161 ~~~~~~~--------------------~~~---~~~~~~~~~~~~~~~~~~~~--------------------------~ 191 (381)
T COG0438 161 LKELLEA--------------------LGV---PNKIVVIPNGIDTEKFAPAR--------------------------I 191 (381)
T ss_pred HHHHHHH--------------------hCC---CCCceEecCCcCHHHcCccc--------------------------c
Confidence 4221000 011 23788999999988776530 1
Q ss_pred CCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003987 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~ 644 (781)
++.......+++++||+.+.||++.+++++..+.+..+++.++++|.+... .+.+..++.+++..++|.
T Consensus 192 ~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-----------~~~~~~~~~~~~~~~~v~ 260 (381)
T COG0438 192 GLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-----------REELEKLAKKLGLEDNVK 260 (381)
T ss_pred CCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-----------HHHHHHHHHHhCCCCcEE
Confidence 111111246899999999999999999999999887667999999999761 345666888888888999
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHH
Q 003987 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAEL 724 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~ 724 (781)
|+| .++.+++..+++. +|++++||.+|+||++++|||+||+|||+|+.++..|++.++.+|+++++.|.++++++
T Consensus 261 ~~g----~~~~~~~~~~~~~-~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 335 (381)
T COG0438 261 FLG----YVPDEELAELLAS-ADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADA 335 (381)
T ss_pred Eec----ccCHHHHHHHHHh-CCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHH
Confidence 999 4556688888885 89999999999999999999999999999999999999998878997777789999999
Q ss_pred HHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 725 MADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 725 I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
+..++ ++++.++.+++.+++.+.+.|+|+... +.|.+++.
T Consensus 336 i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 375 (381)
T COG0438 336 LEQLL----EDPELREELGEAARERVEEEFSWERIA--EQLLELYE 375 (381)
T ss_pred HHHHh----cCHHHHHHHHHHHHHHHHHhcCHHHHH--HHHHHHHH
Confidence 98887 677889999987788887899997753 45555543
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-17 Score=190.81 Aligned_cols=304 Identities=11% Similarity=0.043 Sum_probs=209.6
Q ss_pred CceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHH
Q 003987 407 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 407 kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
.-|+|-.|.....+++..+.++. ..++-+..|..++.. .++. .+..-..-+..|-.||.|=..|+..
T Consensus 132 ~~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs~----eifr--------~LP~r~~ll~glL~aDliGFqt~~y 199 (487)
T TIGR02398 132 EGATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSA----DVFN--------ILPWREQIIGSLLCCDYIGFHIPRY 199 (487)
T ss_pred CCCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCCh----HHHh--------hCCchHHHHHHHhcCCeEEeCCHHH
Confidence 45899999999888888886653 467888888765532 2221 1112223445788899999999877
Q ss_pred Hhhcccccccccccccccc----ccc--e-------eeeccCCCCC--CceEEecCCCcCCCCCCCcH---HHHHHhhhh
Q 003987 486 IAGTKNTVGQYESHTAFTL----PGL--Y-------RVVHGIDVFD--PKFNIVSPGADMDIYFPYSE---KQKRLTALH 547 (781)
Q Consensus 486 ~~~~k~~v~qyes~~~f~l----~~l--y-------~v~~gi~~f~--~k~~VIpnGvD~~~f~p~~~---~~~r~~~~~ 547 (781)
+..+.+.+.+......-.- ++. + ....++.... -++.++|.|||.+.|.+... ...+...
T Consensus 200 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~-- 277 (487)
T TIGR02398 200 VENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMER-- 277 (487)
T ss_pred HHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHH--
Confidence 7654444332211000000 000 0 0000111112 25778999999998855321 1111111
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHH
Q 003987 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee 623 (781)
.++++| ++++|++++|++..||+...++||+++.+.+|+ +.|++||.... +..+++
T Consensus 278 ------------lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr---~~v~~y 337 (487)
T TIGR02398 278 ------------IRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAA---SGMTIY 337 (487)
T ss_pred ------------HHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCc---ccchHH
Confidence 112233 578999999999999999999999999887785 79999988653 334555
Q ss_pred HHHHHHHHHHHHHc-------CCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC----cE
Q 003987 624 IAEIEKMHELMKTY-------KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL----PT 692 (781)
Q Consensus 624 ~~~~~~l~~li~el-------gL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl----PV 692 (781)
.+..+++.+++.+. +..+-+.+.+ .++.+++..+|+ .||+++.||..||++++..|+|+|+. |+
T Consensus 338 ~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~----~v~~~el~alYr-~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvL 412 (487)
T TIGR02398 338 DELQGQIEQAVGRINGRFARIGWTPLQFFTR----SLPYEEVSAWFA-MADVMWITPLRDGLNLVAKEYVAAQGLLDGVL 412 (487)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCccEEEEcC----CCCHHHHHHHHH-hCCEEEECccccccCcchhhHHhhhcCCCCCE
Confidence 66677777777765 3344456666 788999999999 59999999999999999999999998 99
Q ss_pred EEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003987 693 FATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 693 VaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw 756 (781)
|.|..+|.++.+ ..+++++|.|++++|++|.+.++ ..++.+++..+..++++ .++|.
T Consensus 413 ILSefaGaa~~l---~~AllVNP~d~~~~A~ai~~AL~---m~~~Er~~R~~~l~~~v-~~~d~ 469 (487)
T TIGR02398 413 VLSEFAGAAVEL---KGALLTNPYDPVRMDETIYVALA---MPKAEQQARMREMFDAV-NYYDV 469 (487)
T ss_pred EEeccccchhhc---CCCEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-hhCCH
Confidence 999999998776 35899999999999999998884 55566666666667766 44443
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-17 Score=195.33 Aligned_cols=348 Identities=14% Similarity=0.127 Sum_probs=232.2
Q ss_pred HHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH--------------cCCcEEEEecCCcccCC---CCChhhHh--
Q 003987 393 TEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK--------------MGITQCTIAHALEKTKY---PDSDIYWK-- 453 (781)
Q Consensus 393 ~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~--------------~gvp~v~t~H~l~~~k~---~~s~~~~k-- 453 (781)
.....+.++ .+..+||+||+|.+.++++...+.+. ...+.++|.|++.+... +. +...+
T Consensus 148 ~~a~l~~l~-~l~~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~-~~~~~~~ 225 (601)
T TIGR02094 148 GIGGVRALR-ALGIDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPE-DLMRKYF 225 (601)
T ss_pred HHHHHHHHH-HcCCCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCH-HHHHHHh
Confidence 333444443 34679999999999998777665332 13668999999766542 21 11110
Q ss_pred ------------hhh---ccc-cchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCC
Q 003987 454 ------------KFD---EKY-HFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVF 517 (781)
Q Consensus 454 ------------~~~---~~y-~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f 517 (781)
.+. ..+ ....++..-..++..||.|.++|.....-.++..+.+ +. +....
T Consensus 226 ~~~~~~~gl~~~~~~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l-----------~~---~~~~~ 291 (601)
T TIGR02094 226 GDYAANLGLPREQLLALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFL-----------YP---GYEEE 291 (601)
T ss_pred hhhhhHhCCCHHHHHhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhh-----------hh---hcccc
Confidence 000 000 0001234456788999999999986654222211111 10 11111
Q ss_pred CCceEEecCCCcCCCCCCCcHHHHHH----------------------------hhhhcchhhhccC-------------
Q 003987 518 DPKFNIVSPGADMDIYFPYSEKQKRL----------------------------TALHGSIEQLLFD------------- 556 (781)
Q Consensus 518 ~~k~~VIpnGvD~~~f~p~~~~~~r~----------------------------~~~~~~i~~~l~~------------- 556 (781)
..++.-|.||||...+.|.+...-.. .+.+...++.|..
T Consensus 292 ~~~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~ 371 (601)
T TIGR02094 292 EVPIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRR 371 (601)
T ss_pred cCCccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence 33588899999999887754332110 0111111111110
Q ss_pred --ccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhcc--C--CCeEEEEEeCcCCCCCCcchHHHHHHHHH
Q 003987 557 --PEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL--R--ELVNLVVVAGYIDVNKSKDREEIAEIEKM 630 (781)
Q Consensus 557 --~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~--~--~~v~LvIVG~g~~~~~~~d~ee~~~~~~l 630 (781)
..+.-..+|+..+++.+++++++|+..+||.+.+++++.++.+. . .+++||+.|.+.. .|..-++.++.+
T Consensus 372 g~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p----~d~~gk~~i~~i 447 (601)
T TIGR02094 372 GADAAILMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHP----ADGEGKEIIQRI 447 (601)
T ss_pred cCcchhhhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----ccchHHHHHHHH
Confidence 00000135555678999999999999999999999998887641 1 3599999999965 344556678888
Q ss_pred HHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEE-cCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCC
Q 003987 631 HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQ-PAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA 708 (781)
Q Consensus 631 ~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~-PS~-~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~ 708 (781)
.+++++....++|.|+- . -+..+.+.|-.++|++++ ||. +|++|++=+=||..|.+.+++..|...|.. ++.
T Consensus 448 ~~la~~~~~~~kv~f~~----~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~ 521 (601)
T TIGR02094 448 VEFSKRPEFRGRIVFLE----N-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGD 521 (601)
T ss_pred HHHHhcccCCCCEEEEc----C-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCC
Confidence 88888755678999985 2 245666666667999999 999 999999999999999999999999988876 678
Q ss_pred eEEEECC------------CCHHHHHHHHHHHH-HhccCC-----HHHHHHHHHHHHHHHHHhcCcchhhhccchHHH
Q 003987 709 SGFHIDP------------YHPDQAAELMADFF-GKCKEN-----PSHWKKISDGGLKRIYERLVVSSDGIVDPSPFV 768 (781)
Q Consensus 709 ~G~lv~p------------~d~~~lA~~I~~~l-~~l~~d-----p~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~l 768 (781)
|||.|.+ .|.+++-++|.+.+ ....++ |..|.+|.++|.+.....|||++| ++.|.++
T Consensus 522 nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~--a~~Y~~~ 597 (601)
T TIGR02094 522 NGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRM--VREYVDK 597 (601)
T ss_pred cEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHH--HHHHHHH
Confidence 9999984 79999999997655 323343 667999999999887778999765 4556554
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.7e-17 Score=180.81 Aligned_cols=234 Identities=12% Similarity=0.117 Sum_probs=161.1
Q ss_pred Cc-eEEEEcCCCch---HHHHHH--HHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEe
Q 003987 407 FP-DFIIGNYSDGN---LVASLL--AYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIIT 480 (781)
Q Consensus 407 kp-DIIh~~~~~~~---lva~ll--ar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt 480 (781)
++ |+||.+++... +...++ .++.|+|+++++|++++........ . ...+...++.||.||+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~~~~-----------~--~~~~~~~~~~aD~iI~ 129 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDSNYY-----------L--MKEEIDMLNLADVLIV 129 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccccch-----------h--hHHHHHHHHhCCEEEE
Confidence 56 99999887642 122222 2344799999999987643211100 0 1235678899999999
Q ss_pred cCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003987 481 STYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 481 ~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (781)
.|....+.+++ .|+. ..++.++++..+.....+.
T Consensus 130 ~S~~~~~~l~~--------------------~g~~--~~~i~~~~~~~~~~~~~~~------------------------ 163 (333)
T PRK09814 130 HSKKMKDRLVE--------------------EGLT--TDKIIVQGIFDYLNDIELV------------------------ 163 (333)
T ss_pred CCHHHHHHHHH--------------------cCCC--cCceEeccccccccccccc------------------------
Confidence 99987663221 2332 4567666655433111000
Q ss_pred ccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003987 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~ 640 (781)
. ....++.|+|+|++...+++. ...++++|+|+|+|+. .+ ...
T Consensus 164 -~-----~~~~~~~i~yaG~l~k~~~l~----------~~~~~~~l~i~G~g~~------------~~---------~~~ 206 (333)
T PRK09814 164 -K-----TPSFQKKINFAGNLEKSPFLK----------NWSQGIKLTVFGPNPE------------DL---------ENS 206 (333)
T ss_pred -c-----cccCCceEEEecChhhchHHH----------hcCCCCeEEEECCCcc------------cc---------ccC
Confidence 0 023456899999999543211 1236799999999976 11 345
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcC-C----------CCCCcHHHHHHHHcCCcEEEcCccccccccccCCe
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPA-F----------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS 709 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS-~----------~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~ 709 (781)
++|.|+| .++.+++..+++. |+.+.+. . .-++|.++.|+||||+|||+++.++..|+|+++.+
T Consensus 207 ~~V~f~G----~~~~eel~~~l~~--~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~ 280 (333)
T PRK09814 207 ANISYKG----WFDPEELPNELSK--GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGL 280 (333)
T ss_pred CCeEEec----CCCHHHHHHHHhc--CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCc
Confidence 7899999 6778999999985 4433332 1 13578899999999999999999999999999999
Q ss_pred EEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 710 GFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 710 G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
|++++ +.++++++|..+ +++.+++|++++++.+
T Consensus 281 G~~v~--~~~el~~~l~~~------~~~~~~~m~~n~~~~~ 313 (333)
T PRK09814 281 GFVVD--SLEELPEIIDNI------TEEEYQEMVENVKKIS 313 (333)
T ss_pred eEEeC--CHHHHHHHHHhc------CHHHHHHHHHHHHHHH
Confidence 99998 778899988653 4577899999999877
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.5e-17 Score=182.19 Aligned_cols=249 Identities=14% Similarity=0.152 Sum_probs=161.5
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003987 406 GFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 406 ~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
.+||+||++.+.+ +......+++.|+|+++..+.. .|...... . ....+.+|.++++++.
T Consensus 84 ~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~----------~~~~~~~~--------~-~~~~~~~d~i~~~~~~ 144 (380)
T PRK00025 84 EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPS----------VWAWRQGR--------A-FKIAKATDHVLALFPF 144 (380)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCc----------hhhcCchH--------H-HHHHHHHhhheeCCcc
Confidence 4899999876432 3333345667799988765431 11100000 0 1236678999998875
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003987 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 485 ~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (781)
..+. +.. .|+ ++.++.|.+......+..... .++++
T Consensus 145 ~~~~-------~~~-------------~g~-----~~~~~G~p~~~~~~~~~~~~~-------------------~~~~l 180 (380)
T PRK00025 145 EAAF-------YDK-------------LGV-----PVTFVGHPLADAIPLLPDRAA-------------------ARARL 180 (380)
T ss_pred CHHH-------HHh-------------cCC-----CeEEECcCHHHhcccccChHH-------------------HHHHc
Confidence 5431 100 121 345555554332211111111 11346
Q ss_pred CCCCCCCCCEEE-EEe-eccCC-CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc-CCC
Q 003987 565 GTLSDRSKPIVF-SMA-RLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLD 640 (781)
Q Consensus 565 g~l~~~~k~iIl-~vG-RL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el-gL~ 640 (781)
|+ ++++++++ +.| |.... +++..++++++++.+..++++++++|+++. ..+.++++++++ ++.
T Consensus 181 ~~--~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~-----------~~~~~~~~~~~~~~~~ 247 (380)
T PRK00025 181 GL--DPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK-----------RREQIEEALAEYAGLE 247 (380)
T ss_pred CC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh-----------hHHHHHHHHhhcCCCC
Confidence 65 45566654 444 44443 457899999999877778899999987432 145566667766 553
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-----------------Cccccccc
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-----------------CHGGPAEI 703 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT-----------------~~gG~~Ei 703 (781)
+.+.. +++..+|+ .+|++|.+| |.+.+|||+||+|+|++ +.++.+++
T Consensus 248 --v~~~~--------~~~~~~~~-~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~ 311 (380)
T PRK00025 248 --VTLLD--------GQKREAMA-AADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNL 311 (380)
T ss_pred --eEEEc--------ccHHHHHH-hCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHH
Confidence 55543 36788888 499999997 88989999999999987 56777888
Q ss_pred cccCC--eEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 704 IEHGA--SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 704 I~dg~--~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
+.++. .|++.+..|++++++++.+++ .|++.+++|++++.+..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 356 (380)
T PRK00025 312 LAGRELVPELLQEEATPEKLARALLPLL----ADGARRQALLEGFTELH 356 (380)
T ss_pred hcCCCcchhhcCCCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHH
Confidence 87764 557778889999999998887 89999999999875544
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.6e-16 Score=164.40 Aligned_cols=378 Identities=16% Similarity=0.218 Sum_probs=234.7
Q ss_pred ceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCC---ccCccee
Q 003987 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGT---TCNQRLE 354 (781)
Q Consensus 278 ~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~---~~~~~~e 354 (781)
...++++.|..- ..||.++..+--+|++.+. -..+-. +|+|..+.-.... ...+..+
T Consensus 43 ~ktvgfFHPYCN----------AGGGGErVLW~Avr~~q~k------~~n~~~----viYsGD~n~t~~~IL~k~k~~F~ 102 (465)
T KOG1387|consen 43 VKTVGFFHPYCN----------AGGGGERVLWKAVRITQRK------FPNNVI----VIYSGDFNVTPENILNKVKNKFD 102 (465)
T ss_pred ceEEEEeccccc----------CCCCcceehhHHHHHHHHh------CCCceE----EEEeCCCCCCHHHHHHHHHHhcC
Confidence 356888866543 3588899999778776322 122223 3666553221100 0001111
Q ss_pred eecCCCCeEEEEeccCCCcccccccccccCchhhH---HHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCC
Q 003987 355 RVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYL---ETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGI 431 (781)
Q Consensus 355 ~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl---~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gv 431 (781)
-.-+..++..+.+..+. |++. .-|+.. -.-...+.-.+.+..+..|||.+-....+ +.--..++..++
T Consensus 103 idlDs~nI~Fi~Lk~R~-------lVea-~~~~hfTllgQaigsmIl~~Eai~r~~Pdi~IDtMGY~-fs~p~~r~l~~~ 173 (465)
T KOG1387|consen 103 IDLDSDNIFFIYLKLRY-------LVEA-STWKHFTLLGQAIGSMILAFEAIIRFPPDIFIDTMGYP-FSYPIFRRLRRI 173 (465)
T ss_pred ceecccceEEEEEEeee-------eeec-ccccceehHHHHHHHHHHHHHHHHhCCchheEecCCCc-chhHHHHHHccC
Confidence 11122345555444332 2322 223322 11122222233334466899988433222 111223446789
Q ss_pred cEEEEecCCcccC--------CCCC-hhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhcccccccccccccc
Q 003987 432 TQCTIAHALEKTK--------YPDS-DIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAF 502 (781)
Q Consensus 432 p~v~t~H~l~~~k--------~~~s-~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f 502 (781)
|++...|-.--.+ .+.+ -+.|..+. .|++..+. -..+=..||.++++|.......++.++
T Consensus 174 ~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~Kla-Y~rlFa~l--Y~~~G~~ad~vm~NssWT~nHI~qiW~-------- 242 (465)
T KOG1387|consen 174 PVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLA-YWRLFALL--YQSAGSKADIVMTNSSWTNNHIKQIWQ-------- 242 (465)
T ss_pred ceEEEEecccccHHHHHHHHhhhhcchhhhHHHH-HHHHHHHH--HHhccccceEEEecchhhHHHHHHHhh--------
Confidence 9999888532111 0011 11121111 11111110 113445799999999765443332221
Q ss_pred ccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeecc
Q 003987 503 TLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD 582 (781)
Q Consensus 503 ~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~ 582 (781)
..+..+|+|..+.+... +..+. ...+.+.++++|.+.
T Consensus 243 ---------------~~~~~iVyPPC~~e~lk---------------------------s~~~t-e~~r~~~ll~l~Q~R 279 (465)
T KOG1387|consen 243 ---------------SNTCSIVYPPCSTEDLK---------------------------SKFGT-EGERENQLLSLAQFR 279 (465)
T ss_pred ---------------ccceeEEcCCCCHHHHH---------------------------HHhcc-cCCcceEEEEEeecC
Confidence 23667777766654111 01111 245678899999999
Q ss_pred CCCChHHHHHHHHHhhcc------CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChH
Q 003987 583 HVKNMTGLVECYGKNSQL------RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNG 656 (781)
Q Consensus 583 ~~Kgl~~LieA~~~l~~~------~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~ 656 (781)
+.||+. +++.++-.... .+.++|+|||+... .++.+..+.|++++++++++++|.|-- .+|.+
T Consensus 280 PEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRn------eeD~ervk~Lkd~a~~L~i~~~v~F~~----N~Py~ 348 (465)
T KOG1387|consen 280 PEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRN------EEDEERVKSLKDLAEELKIPKHVQFEK----NVPYE 348 (465)
T ss_pred cccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCC------hhhHHHHHHHHHHHHhcCCccceEEEe----cCCHH
Confidence 999999 65555443332 35689999999876 456677899999999999999999997 78999
Q ss_pred HHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccc-ccccc---CCeEEEECCCCHHHHHHHHHHHHHhc
Q 003987 657 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA-EIIEH---GASGFHIDPYHPDQAAELMADFFGKC 732 (781)
Q Consensus 657 el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~-EiI~d---g~~G~lv~p~d~~~lA~~I~~~l~~l 732 (781)
++..++.. |.+.|+.-+.|.||+.++|+||+|+-.|+.+.||+. +||.+ ..+||+.+ +.++.|++|.++..
T Consensus 349 ~lv~lL~~-a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~-- 423 (465)
T KOG1387|consen 349 KLVELLGK-ATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVK-- 423 (465)
T ss_pred HHHHHhcc-ceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHH--
Confidence 99999995 999999999999999999999999999999988865 56653 34799985 78899999998875
Q ss_pred cCCHHHHHHHHHHHHHHHHHhcCc
Q 003987 733 KENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 733 ~~dp~~~~~~s~~a~~~~~~~ysw 756 (781)
.+++.+..|+++||..+ .+|+-
T Consensus 424 -~~~~~r~~~r~~AR~s~-~RFsE 445 (465)
T KOG1387|consen 424 -LNYDERNMMRRNARKSL-ARFGE 445 (465)
T ss_pred -cCHHHHHHHHHHHHHHH-HHhhH
Confidence 78888999999999888 67765
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.3e-17 Score=179.62 Aligned_cols=266 Identities=15% Similarity=0.125 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHcCCCceEEEEcCC-CchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHH
Q 003987 393 TEDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA 471 (781)
Q Consensus 393 ~~~~~~~i~~~~~~kpDIIh~~~~-~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a 471 (781)
...+.+.+.+. +||+||+|.. ...+.+.++++..|+|++.+-+++ .+..... .|. +. .. ....
T Consensus 75 ~~~l~~~l~~~---~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~--~~----~~----r~~~ 138 (365)
T TIGR00236 75 LEGLEELLLEE---KPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMP--EE----IN----RQLT 138 (365)
T ss_pred HHHHHHHHHHc---CCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCc--cH----HH----HHHH
Confidence 34444445443 8999999964 346778999999999987654443 1100000 010 00 00 0112
Q ss_pred HhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCC-cCCCCCCCcHHHHHHhhhhcch
Q 003987 472 MNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSI 550 (781)
Q Consensus 472 ~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGv-D~~~f~p~~~~~~r~~~~~~~i 550 (781)
.+.+|.++++|....+.+.+ .|++ ..++.+++||+ |...+.+.......
T Consensus 139 ~~~ad~~~~~s~~~~~~l~~--------------------~G~~--~~~I~vign~~~d~~~~~~~~~~~~~-------- 188 (365)
T TIGR00236 139 GHIADLHFAPTEQAKDNLLR--------------------ENVK--ADSIFVTGNTVIDALLTNVEIAYSSP-------- 188 (365)
T ss_pred HHHHHhccCCCHHHHHHHHH--------------------cCCC--cccEEEeCChHHHHHHHHHhhccchh--------
Confidence 33589999999877652211 2444 67999999996 43211110000000
Q ss_pred hhhccCccccccccCCCCCCCCCEEEEEe-ecc-CCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHH
Q 003987 551 EQLLFDPEQNDEHVGTLSDRSKPIVFSMA-RLD-HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 628 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~~~~k~iIl~vG-RL~-~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~ 628 (781)
.++.++. +++++++.+ |.. ..||+..+++|+.++.+..++++++++|++.. ...+
T Consensus 189 ---------~~~~~~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~----------~~~~ 245 (365)
T TIGR00236 189 ---------VLSEFGE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNP----------VVRE 245 (365)
T ss_pred ---------HHHhcCC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCCh----------HHHH
Confidence 0122331 234555544 542 45899999999999877778899998865432 0111
Q ss_pred HHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccC
Q 003987 629 KMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHG 707 (781)
Q Consensus 629 ~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT-~~gG~~EiI~dg 707 (781)
.+.+.++..++|+|+| .+...++..++++ +|+++.+| |..++|||+||+|||++ +.|+..|++.++
T Consensus 246 ---~~~~~~~~~~~v~~~~----~~~~~~~~~~l~~-ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g 312 (365)
T TIGR00236 246 ---PLHKHLGDSKRVHLIE----PLEYLDFLNLAAN-SHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG 312 (365)
T ss_pred ---HHHHHhCCCCCEEEEC----CCChHHHHHHHHh-CCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC
Confidence 2334456667899998 5667788889995 99999987 66789999999999996 778888988766
Q ss_pred CeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 003987 708 ASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 708 ~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
+|+++ +.|+++++++|.+++ .|++.+++++++.
T Consensus 313 -~~~lv-~~d~~~i~~ai~~ll----~~~~~~~~~~~~~ 345 (365)
T TIGR00236 313 -TNKLV-GTDKENITKAAKRLL----TDPDEYKKMSNAS 345 (365)
T ss_pred -ceEEe-CCCHHHHHHHHHHHH----hChHHHHHhhhcC
Confidence 56666 479999999998877 7999888887654
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.1e-16 Score=176.62 Aligned_cols=258 Identities=14% Similarity=0.123 Sum_probs=170.6
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.+.+.+.+ .+||+||+|.... .+.+.++++..|+|++.+.|+... +.... .|.. . .....+
T Consensus 79 ~l~~~l~~---~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s--~~~~~-~~~~----~--------r~~~~~ 140 (363)
T cd03786 79 GLEAVLLE---EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRS--FDRGM-PDEE----N--------RHAIDK 140 (363)
T ss_pred HHHHHHHH---hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEeccccc--CCCCC-CchH----H--------HHHHHH
Confidence 34444444 3899999997543 567888889999998876665321 10000 1110 0 112456
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCC-cCCCCCCCcHHHHHHhhhhcchhh
Q 003987 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQ 552 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGv-D~~~f~p~~~~~~r~~~~~~~i~~ 552 (781)
.+|.++++|+...+.+. ..|++ ..++.+++|++ |...+.+......
T Consensus 141 ~ad~~~~~s~~~~~~l~--------------------~~G~~--~~kI~vign~v~d~~~~~~~~~~~~----------- 187 (363)
T cd03786 141 LSDLHFAPTEEARRNLL--------------------QEGEP--PERIFVVGNTMIDALLRLLELAKKE----------- 187 (363)
T ss_pred HhhhccCCCHHHHHHHH--------------------HcCCC--cccEEEECchHHHHHHHHHHhhccc-----------
Confidence 78999999987755211 12444 77899999985 5322211110000
Q ss_pred hccCccccccccCCCCCCCCCEEEEEeeccC---CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHH
Q 003987 553 LLFDPEQNDEHVGTLSDRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEK 629 (781)
Q Consensus 553 ~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~ 629 (781)
..++.+|+ ++++.++++.||... .||+..+++++.++... ++.+++.|+++. .++
T Consensus 188 ------~~~~~~~~--~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~------------~~~ 245 (363)
T cd03786 188 ------LILELLGL--LPKKYILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRT------------RPR 245 (363)
T ss_pred ------hhhhhccc--CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCCh------------HHH
Confidence 00123454 344557778999875 79999999999988643 466666666543 467
Q ss_pred HHHHHHHcCC-CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccccC
Q 003987 630 MHELMKTYKL-DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIEHG 707 (781)
Q Consensus 630 l~~li~elgL-~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~-gG~~EiI~dg 707 (781)
+++.++++++ .++|+|+| .....++..+++. +|++|.||. | ++.|||+||+|||+++. +...+.+.+
T Consensus 246 l~~~~~~~~~~~~~v~~~~----~~~~~~~~~l~~~-ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~- 314 (363)
T cd03786 246 IREAGLEFLGHHPNVLLIS----PLGYLYFLLLLKN-ADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVES- 314 (363)
T ss_pred HHHHHHhhccCCCCEEEEC----CcCHHHHHHHHHc-CcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhe-
Confidence 7788888876 67899998 4456788888884 999999984 4 47899999999999964 446666644
Q ss_pred CeEEEECCC-CHHHHHHHHHHHHHhccCCHHHHHHH
Q 003987 708 ASGFHIDPY-HPDQAAELMADFFGKCKENPSHWKKI 742 (781)
Q Consensus 708 ~~G~lv~p~-d~~~lA~~I~~~l~~l~~dp~~~~~~ 742 (781)
|..+... |+++++++|.+++ +++..+..|
T Consensus 315 --g~~~~~~~~~~~i~~~i~~ll----~~~~~~~~~ 344 (363)
T cd03786 315 --GTNVLVGTDPEAILAAIEKLL----SDEFAYSLM 344 (363)
T ss_pred --eeEEecCCCHHHHHHHHHHHh----cCchhhhcC
Confidence 4444333 7999999998887 787776665
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.3e-16 Score=186.35 Aligned_cols=320 Identities=13% Similarity=0.116 Sum_probs=211.0
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003987 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 396 ~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
++..+.+..+ .-|+|..|.+...+++..+.++. ..++.+..|..++.. .++ +.+.+...-+..|-.
T Consensus 221 FA~~i~~~~~-~gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~----Eif--------r~LP~r~elL~glL~ 287 (934)
T PLN03064 221 FADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSS----EIH--------RTLPSRSELLRSVLA 287 (934)
T ss_pred HHHHHHHhcC-CCCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCCh----HHH--------hhCCcHHHHHHHHhc
Confidence 3444444432 34899999999888888887764 578889999765532 211 222222334557889
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC--CceEEecCCCcCCCCCCCc---HHHHHHhhhhcc
Q 003987 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMDIYFPYS---EKQKRLTALHGS 549 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~--~k~~VIpnGvD~~~f~p~~---~~~~r~~~~~~~ 549 (781)
||.|=+.|+..+..+.....+.... . ....++.... .++.+.|-|||.+.|.... ....+...+
T Consensus 288 aDlIGFqT~~y~rhFl~~c~rlLg~-----~---~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~l--- 356 (934)
T PLN03064 288 ADLVGFHTYDYARHFVSACTRILGL-----E---GTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKEL--- 356 (934)
T ss_pred CCeEEeCCHHHHHHHHHHHHHHhCc-----c---ccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHH---
Confidence 9999999987766433322211100 0 0011222112 2466789999998875432 111111111
Q ss_pred hhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeE----EEEEeCcCCCCCCcchHHHH
Q 003987 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVN----LVVVAGYIDVNKSKDREEIA 625 (781)
Q Consensus 550 i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~----LvIVG~g~~~~~~~d~ee~~ 625 (781)
++.+ .++.+|++++|++..||+...+.||.++.+.+|+++ |+-|+-.. .+..+++.+
T Consensus 357 -----------r~~~-----~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~ps---r~~v~eY~~ 417 (934)
T PLN03064 357 -----------KERF-----AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPT---RTDVPEYQK 417 (934)
T ss_pred -----------HHHh-----CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCC---CCCcHHHHH
Confidence 1122 356799999999999999999999999887777653 44343221 111233444
Q ss_pred HHHHHHHHHHHcC----CCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC----cEEEc
Q 003987 626 EIEKMHELMKTYK----LDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL----PTFAT 695 (781)
Q Consensus 626 ~~~~l~~li~elg----L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl----PVVaT 695 (781)
...++.+++.+.+ -.+ -|+++. ..++.+++..+|+ .+|++|.||..|||+++..|||+|+. +.|.|
T Consensus 418 l~~~V~~~V~rIN~~fg~~~w~Pv~~~~---~~l~~eeL~AlY~-~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILS 493 (934)
T PLN03064 418 LTSQVHEIVGRINGRFGTLTAVPIHHLD---RSLDFHALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILS 493 (934)
T ss_pred HHHHHHHHHHHHhhhccCCCcceEEEec---cCCCHHHHHHHHH-hCCEEEeCccccccCchHHHHHHhhcCCCCCeEEe
Confidence 4455555555432 211 144443 3578999999999 59999999999999999999999954 44449
Q ss_pred CccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 696 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 696 ~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
.++|.++.+ +..+++|+|.|.+++|++|.+++. .+++.++++.+.+++++ .++|| ..+++.+.+-++
T Consensus 494 EfaGaa~~L--~~~AllVNP~D~~~vA~AI~~AL~---M~~~Er~~r~~~~~~~V-~~~d~--~~Wa~~fl~~L~ 560 (934)
T PLN03064 494 EFAGAAQSL--GAGAILVNPWNITEVAASIAQALN---MPEEEREKRHRHNFMHV-TTHTA--QEWAETFVSELN 560 (934)
T ss_pred CCCchHHHh--CCceEEECCCCHHHHHHHHHHHHh---CCHHHHHHHHHHHHhhc-ccCCH--HHHHHHHHHHHH
Confidence 999988888 456999999999999999998883 58999999999999999 66787 445555444443
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.9e-15 Score=168.76 Aligned_cols=170 Identities=10% Similarity=0.167 Sum_probs=145.5
Q ss_pred CCEEEEEe--eccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC---------
Q 003987 572 KPIVFSMA--RLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD--------- 640 (781)
Q Consensus 572 k~iIl~vG--RL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~--------- 640 (781)
+..+++++ || +.|.++.+++++.++.+..|++.|.+.|.+.+ ....+.++++++++++.
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~---------~~~~~~l~~~i~~~~~~~~~~~~~~~ 388 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNND---------NDITQLLEDILEQINEEYNQDKNFFS 388 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCc---------hhHHHHHHHHHHHHHhhhchhhhccc
Confidence 33577788 99 99999999999999999999999999998853 02245677777777666
Q ss_pred --------------------CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003987 641 --------------------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 700 (781)
Q Consensus 641 --------------------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~ 700 (781)
++|.|.|.++ ..++.+.+.. +.++|.+|..|+|+ +.+||+++|+|+| .-|+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~----e~dl~~~~~~-arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~ 459 (519)
T TIGR03713 389 LSEQDENQPILQTDEEQKEKERIAFTTLTN----EEDLISALDK-LRLIIDLSKEPDLY-TQISGISAGIPQI---NKVE 459 (519)
T ss_pred cchhhhhhhcccchhhcccccEEEEEecCC----HHHHHHHHhh-heEEEECCCCCChH-HHHHHHHcCCCee---ecCC
Confidence 7899999544 3478889986 99999999999999 9999999999999 4577
Q ss_pred ccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 701 AEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 701 ~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
.++|.||+||+++ +|.++++++|..+| .++..|++++..+.+.+ ++||- ..+...|++++
T Consensus 460 ~~~V~d~~NG~li--~d~~~l~~al~~~L----~~~~~wn~~~~~sy~~~-~~yS~--~~i~~kW~~~~ 519 (519)
T TIGR03713 460 TDYVEHNKNGYII--DDISELLKALDYYL----DNLKNWNYSLAYSIKLI-DDYSS--ENIIERLNELI 519 (519)
T ss_pred ceeeEcCCCcEEe--CCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-HHhhH--HHHHHHHHhhC
Confidence 9999999999999 69999999999888 89999999999999999 78866 56778887753
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.3e-14 Score=169.30 Aligned_cols=333 Identities=14% Similarity=0.123 Sum_probs=220.6
Q ss_pred HcCCCceEEEEcCCCchHHHH-----HHHHH----------cCCcEEEEecCCcccC--CCCChhhHh------------
Q 003987 403 ELQGFPDFIIGNYSDGNLVAS-----LLAYK----------MGITQCTIAHALEKTK--YPDSDIYWK------------ 453 (781)
Q Consensus 403 ~~~~kpDIIh~~~~~~~lva~-----llar~----------~gvp~v~t~H~l~~~k--~~~s~~~~k------------ 453 (781)
.+..+||+||+|.+.++++.. ++... .+...|+|.|++.+.. .-..+...+
T Consensus 244 ~lg~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl~ 323 (778)
T cd04299 244 ALGIKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGLS 323 (778)
T ss_pred HhCCCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCCC
Confidence 345689999999999988776 54321 1467899999976544 111111111
Q ss_pred --hhhccc-cc----hhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecC
Q 003987 454 --KFDEKY-HF----SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP 526 (781)
Q Consensus 454 --~~~~~y-~f----~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpn 526 (781)
.+.... .+ ..++..-..++..|+.+.++|.-.-.-+++.+.. ++ .|.+....++.-|.|
T Consensus 324 ~~~~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~-----------~~---~g~p~~~~~i~~ITN 389 (778)
T cd04299 324 RDRFLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAG-----------LW---PGFPVEEVPIGHVTN 389 (778)
T ss_pred HHHHhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhh-----------hh---ccCCcccCceeceeC
Confidence 000000 00 0124445678999999999998553222332211 11 133322456888999
Q ss_pred CCcCCCCC-CCcHHHH---------------------------HHhhhhcchhhhccCcc---------------ccccc
Q 003987 527 GADMDIYF-PYSEKQK---------------------------RLTALHGSIEQLLFDPE---------------QNDEH 563 (781)
Q Consensus 527 GvD~~~f~-p~~~~~~---------------------------r~~~~~~~i~~~l~~~~---------------~~~~~ 563 (781)
||+...+. |....-- .+.+.+...++.|.... ..-..
T Consensus 390 GVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~ 469 (778)
T cd04299 390 GVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGE 469 (778)
T ss_pred CcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhh
Confidence 99998776 4211110 00001111111110000 00001
Q ss_pred cCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhcc----CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC
Q 003987 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 639 (781)
Q Consensus 564 ~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL 639 (781)
.+...+++.++|+++.|+..+|+.+.++..+.++.+. ...++||+.|.+.. .|..-++.++.+.+++++...
T Consensus 470 ~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP----~d~~gK~iIk~i~~~a~~p~~ 545 (778)
T cd04299 470 ADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHP----ADEPGKELIQEIVEFSRRPEF 545 (778)
T ss_pred cCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCc----cchHHHHHHHHHHHHHhCcCC
Confidence 2444467888999999999999999999988777541 12599999999865 455557788888888886677
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECC--
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP-- 715 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p-- 715 (781)
.++|.|+- .. +..+.+.|-..+|++++||+ +|++|++=+=||.-|.+.+++-.|...|.- ++.|||.|.+
T Consensus 546 ~~kVvfle----~Y-d~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~ 619 (778)
T cd04299 546 RGRIVFLE----DY-DMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGD 619 (778)
T ss_pred CCcEEEEc----CC-CHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCc
Confidence 78999985 23 44666666667999999999 999999999999999999999999999987 8899999987
Q ss_pred ----------CCHHHHHHHHHHHHH-hccC-----CHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 716 ----------YHPDQAAELMADFFG-KCKE-----NPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 716 ----------~d~~~lA~~I~~~l~-~l~~-----dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
.|.+++-+.|.+-+. ...+ .|..|.+|.+++++.+...|||++|
T Consensus 620 ~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rm 679 (778)
T cd04299 620 EYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERM 679 (778)
T ss_pred cccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHH
Confidence 455555566643222 2223 3788999999999998899999877
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.8e-15 Score=141.88 Aligned_cols=130 Identities=21% Similarity=0.321 Sum_probs=96.9
Q ss_pred CCEEEEEeeccCCCChHHHHH-HHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003987 572 KPIVFSMARLDHVKNMTGLVE-CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~Lie-A~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~ 650 (781)
.++|+++|++.+.||++.+++ ++.++.+..|++.|+|+|.+++ +++++ ..++|+|+|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--------------~l~~~-----~~~~v~~~g--- 59 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--------------ELKRL-----RRPNVRFHG--- 59 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---------------HHCCH-----HHCTEEEE----
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--------------HHHHh-----cCCCEEEcC---
Confidence 357899999999999999999 9999998889999999999765 23333 235899999
Q ss_pred CcCChHHHHHHHHccCcEEEEcCC-CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHH
Q 003987 651 NRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l 729 (781)
.+ +++..+++. +|+++.|+. .++++.+++|||++|+|||+++. +..+++.....|.++ ++|+++++++|.+++
T Consensus 60 -~~--~e~~~~l~~-~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 60 -FV--EELPEILAA-ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp -S---HHHHHHHHC--SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred -CH--HHHHHHHHh-CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 44 589999995 999999985 68999999999999999999988 677777666778888 889999999998876
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.3e-13 Score=153.46 Aligned_cols=318 Identities=14% Similarity=0.150 Sum_probs=169.5
Q ss_pred CceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCcccCCC---CChhh-------HhhhhccccchhhhhHHHHHHhhC
Q 003987 407 FPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYP---DSDIY-------WKKFDEKYHFSCQFTADLIAMNNA 475 (781)
Q Consensus 407 kpDIIh~~~~~~~lva~llar~-~gvp~v~t~H~l~~~k~~---~s~~~-------~k~~~~~y~f~~~~~~e~~a~~~A 475 (781)
+.-+.|+|.|..+....++.++ ..|..|+|.|+.-..++. ..++| +..-...+....+...|+.+...|
T Consensus 143 ~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~A 222 (633)
T PF05693_consen 143 PKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYA 222 (633)
T ss_dssp EEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHS
T ss_pred CcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhc
Confidence 4457789999876544444333 368889999985433221 11112 112222333444566788889999
Q ss_pred CEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhh---
Q 003987 476 DFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQ--- 552 (781)
Q Consensus 476 D~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~--- 552 (781)
|...|+|+-.+...+..++ ...=.|+|||+|.+.|....+..+....-+..|.+
T Consensus 223 dvFTTVSeITa~Ea~~LL~-----------------------r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~ 279 (633)
T PF05693_consen 223 DVFTTVSEITAKEAEHLLK-----------------------RKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVR 279 (633)
T ss_dssp SEEEESSHHHHHHHHHHHS-----------------------S--SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHH
T ss_pred CeeeehhhhHHHHHHHHhC-----------------------CCCCEEcCCCccccccccchHHHHHHHHHHHHHHHHHH
Confidence 9999999865543222211 22335789999998776654433322222223333
Q ss_pred -hccCccccccccCCCCCCCCCEEEEEeecc-CCCChHHHHHHHHHhhc----cCCCe---EEEEEeCcCCCCCCcchHH
Q 003987 553 -LLFDPEQNDEHVGTLSDRSKPIVFSMARLD-HVKNMTGLVECYGKNSQ----LRELV---NLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 553 -~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~-~~Kgl~~LieA~~~l~~----~~~~v---~LvIVG~g~~~~~~~d~ee 623 (781)
.++.. +.+ ..++..+|++.||.. +.||++.++||++++.. ...+. -|+|+=... .+.+.|.
T Consensus 280 ~~f~g~------~df-d~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~---~~~~ve~ 349 (633)
T PF05693_consen 280 GHFYGH------YDF-DLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKT---NSFNVES 349 (633)
T ss_dssp HHSTT---------S--GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SE---EEE-HHH
T ss_pred HHhccc------CCC-CccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCcc---CCcCHHH
Confidence 33332 222 123456688899998 69999999999998853 12232 344443221 1111110
Q ss_pred HH----------------------------------------------------------------------HHHHHHHH
Q 003987 624 IA----------------------------------------------------------------------EIEKMHEL 633 (781)
Q Consensus 624 ~~----------------------------------------------------------------------~~~~l~~l 633 (781)
.. ..+.+-..
T Consensus 350 l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~ 429 (633)
T PF05693_consen 350 LKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNM 429 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHH
Confidence 00 01112222
Q ss_pred HHHcCCC----C--cEEEec---cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccc
Q 003987 634 MKTYKLD----G--QFRWIA---AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII 704 (781)
Q Consensus 634 i~elgL~----~--~V~flG---~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI 704 (781)
+.+.+|. + +|.|.+ ...|.+-+-+.+.++.. +|+.|+||+||+||.|.+|+.++|+|+|+|+..|....+
T Consensus 430 irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~G-cdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~ 508 (633)
T PF05693_consen 430 IRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRG-CDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWM 508 (633)
T ss_dssp HHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHH-SSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHH
T ss_pred HHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhcc-CceeeeccccccccCChHHHhhcCCceeeccchhHHHHH
Confidence 3333331 2 245554 12334555677888885 999999999999999999999999999999988877555
Q ss_pred cc-----CCeEEEE---CCCCHHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 705 EH-----GASGFHI---DPYHPDQAAELMADFFGK-CKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 705 ~d-----g~~G~lv---~p~d~~~lA~~I~~~l~~-l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
.+ ...|+.| .-.+.++.++.|.+++.. |..++..+..+..++.+. .+..+|+..
T Consensus 509 ~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~L-S~~~dW~~~ 571 (633)
T PF05693_consen 509 QEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERL-SDLADWKNF 571 (633)
T ss_dssp HTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHH-GGGGBHHHH
T ss_pred HHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-HHhCCHHHH
Confidence 42 3456655 235677777777665544 345667777777777554 489999875
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-12 Score=137.35 Aligned_cols=372 Identities=13% Similarity=0.115 Sum_probs=230.1
Q ss_pred HHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHH
Q 003987 320 LLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSE 399 (781)
Q Consensus 320 a~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~ 399 (781)
|..|++.|++|+ ++....+ ...+.+-..++++|+.+|-.+.....+ +.-.. -+..|.+.+.-.
T Consensus 33 A~Sla~~gf~Vd----liGy~~s--------~p~e~l~~hprI~ih~m~~l~~~~~~p----~~~~l-~lKvf~Qfl~Ll 95 (444)
T KOG2941|consen 33 ALSLAKLGFQVD----LIGYVES--------IPLEELLNHPRIRIHGMPNLPFLQGGP----RVLFL-PLKVFWQFLSLL 95 (444)
T ss_pred HHHHHHcCCeEE----EEEecCC--------CChHHHhcCCceEEEeCCCCcccCCCc----hhhhh-HHHHHHHHHHHH
Confidence 345899999999 7754421 123444445678998887655322111 11111 112222222222
Q ss_pred HHHHcCCCceEEEEcCCCc---hHHHHHHHHHcCCcEEEEecCCccc-CCCCChhhHhhhhccccchhhhhHHHHHHhhC
Q 003987 400 ITAELQGFPDFIIGNYSDG---NLVASLLAYKMGITQCTIAHALEKT-KYPDSDIYWKKFDEKYHFSCQFTADLIAMNNA 475 (781)
Q Consensus 400 i~~~~~~kpDIIh~~~~~~---~lva~llar~~gvp~v~t~H~l~~~-k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~A 475 (781)
+.-...+.||+|....+.+ -.++.+.+...|.+++++.|+..-+ ... ..........+ +-...|...-+.|
T Consensus 96 ~aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~---~~~g~~h~lV~--l~~~~E~~fgk~a 170 (444)
T KOG2941|consen 96 WALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLK---LKLGFQHPLVR--LVRWLEKYFGKLA 170 (444)
T ss_pred HHHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHH---hhcCCCCchHH--HHHHHHHHhhccc
Confidence 2212256899999888765 5677788888999999999986543 100 00000001111 1113455667789
Q ss_pred CEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEec---C--CCcCCC----CCCCcH----HHHH
Q 003987 476 DFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVS---P--GADMDI----YFPYSE----KQKR 542 (781)
Q Consensus 476 D~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIp---n--GvD~~~----f~p~~~----~~~r 542 (781)
|.-.|+|......+.+.+|- + +..|++ + +.+.+. |.+... ...|
T Consensus 171 ~~nLcVT~AMr~dL~qnWgi-------------------~----ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar 227 (444)
T KOG2941|consen 171 DYNLCVTKAMREDLIQNWGI-------------------N----RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAR 227 (444)
T ss_pred ccchhhHHHHHHHHHHhcCC-------------------c----eeEEEecCCCCCCCchhHHHHHHhhhccccchhhhc
Confidence 99999998887655555431 1 111211 1 011110 111100 0000
Q ss_pred HhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhc-------cCCCeEEEEEeCcCCC
Q 003987 543 LTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQ-------LRELVNLVVVAGYIDV 615 (781)
Q Consensus 543 ~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~-------~~~~v~LvIVG~g~~~ 615 (781)
....+..++..|...+...-... .+....++++.....+..++..|++|+....+ ..|.+-++|.|.||.
T Consensus 228 -~~q~~~~~~taf~~k~~s~~v~~-~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPl- 304 (444)
T KOG2941|consen 228 -EPQDKALERTAFTKKDASGDVQL-LPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPL- 304 (444)
T ss_pred -ccccchhhhhhHhhhcccchhhh-ccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCch-
Confidence 00011222233322222111111 12233457777889999999999999984421 247788889999988
Q ss_pred CCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEE--cCC-CCCCcHHHHHHHHcCCcE
Q 003987 616 NKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQ--PAF-YEAFGLTVVEAMTCGLPT 692 (781)
Q Consensus 616 ~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~--PS~-~E~fGltvlEAMa~GlPV 692 (781)
.+++.+.++++++. +|.+.- .+...++...+++ ++|..|+ .|. -=..|++|+.-..||+||
T Consensus 305 -----------kE~Y~~~I~~~~~~-~v~~~t---pWL~aEDYP~ll~-saDlGVcLHtSSSGLDLPMKVVDMFGcglPv 368 (444)
T KOG2941|consen 305 -----------KEKYSQEIHEKNLQ-HVQVCT---PWLEAEDYPKLLA-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 368 (444)
T ss_pred -----------hHHHHHHHHHhccc-ceeeee---cccccccchhHhh-ccccceEeeecCcccCcchhHHHhhcCCCce
Confidence 77888899999885 466654 3677788888888 5986665 443 234799999999999999
Q ss_pred EEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 693 FATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 693 VaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
+|-++....|+|+|++||++++ |.+++|+++..+++..-.+.+..+++.+++++. +.+.|+.+
T Consensus 369 cA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~--~e~RW~~~ 431 (444)
T KOG2941|consen 369 CAVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE--QELRWDES 431 (444)
T ss_pred eeecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH--HhhhHHHH
Confidence 9999999999999999999997 999999999999966667999999999999887 45677654
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.5e-12 Score=146.17 Aligned_cols=257 Identities=16% Similarity=0.112 Sum_probs=158.7
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.+.+.+++ .+||+|++....+ ++.....++.+|+|+++.+ +.+ -+.|.... -+...+
T Consensus 80 ~~~~~l~~---~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i-~P~-------~waw~~~~-----------~r~l~~ 137 (385)
T TIGR00215 80 EVVQLAKQ---AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYI-SPQ-------VWAWRKWR-----------AKKIEK 137 (385)
T ss_pred HHHHHHHh---cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEe-CCc-------HhhcCcch-----------HHHHHH
Confidence 34444444 4999999887644 5555668888999988544 111 11222110 224556
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCC-CcHHHHHHhhhhcchhh
Q 003987 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP-YSEKQKRLTALHGSIEQ 552 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p-~~~~~~r~~~~~~~i~~ 552 (781)
.+|.|+++++.+.+. | . .. ..+..++.|++-.+.... ......
T Consensus 138 ~~d~v~~~~~~e~~~-------~------------~-~~-----g~~~~~vGnPv~~~~~~~~~~~~~~----------- 181 (385)
T TIGR00215 138 ATDFLLAILPFEKAF-------Y------------Q-KK-----NVPCRFVGHPLLDAIPLYKPDRKSA----------- 181 (385)
T ss_pred HHhHhhccCCCcHHH-------H------------H-hc-----CCCEEEECCchhhhccccCCCHHHH-----------
Confidence 899999998766441 1 1 00 235556766663322211 111111
Q ss_pred hccCccccccccCCCCCCCCCEEEEE--eeccC-CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHH
Q 003987 553 LLFDPEQNDEHVGTLSDRSKPIVFSM--ARLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEK 629 (781)
Q Consensus 553 ~l~~~~~~~~~~g~l~~~~k~iIl~v--GRL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~ 629 (781)
++++|+ ++++++|+.+ +|..+ .|++..+++++..+.+..|++++++++.... ..+.
T Consensus 182 --------r~~lgl--~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-----------~~~~ 240 (385)
T TIGR00215 182 --------REKLGI--DHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-----------RRLQ 240 (385)
T ss_pred --------HHHcCC--CCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-----------hHHH
Confidence 134666 5667777665 37776 7899999999999988778898877654422 1345
Q ss_pred HHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-cc----------
Q 003987 630 MHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HG---------- 698 (781)
Q Consensus 630 l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~-~g---------- 698 (781)
+.++.++++...+|.+.+. +...+|+ ++|++|.+| |.+.+|||+||+|+|.+. ..
T Consensus 241 ~~~~~~~~~~~~~v~~~~~--------~~~~~l~-aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~ 306 (385)
T TIGR00215 241 FEQIKAEYGPDLQLHLIDG--------DARKAMF-AADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRL 306 (385)
T ss_pred HHHHHHHhCCCCcEEEECc--------hHHHHHH-hCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHH
Confidence 5666667766667776651 3456787 599999999 888889999999999872 11
Q ss_pred ------ccccccccCCeEE-EE-CCCCHHHHHHHHHHHHHhccCCH----HHHHHHHHHHHH
Q 003987 699 ------GPAEIIEHGASGF-HI-DPYHPDQAAELMADFFGKCKENP----SHWKKISDGGLK 748 (781)
Q Consensus 699 ------G~~EiI~dg~~G~-lv-~p~d~~~lA~~I~~~l~~l~~dp----~~~~~~s~~a~~ 748 (781)
+.+.++.+....- ++ +.-+++.+++.+.+++ .|+ +.++++.+.-.+
T Consensus 307 ~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll----~~~~~~~~~~~~~~~~~~~ 364 (385)
T TIGR00215 307 VKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLL----ENGLKAYKEMHRERQFFEE 364 (385)
T ss_pred HcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHh----cCCcccHHHHHHHHHHHHH
Confidence 1222232221111 11 2346888999998877 888 888777665443
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.3e-10 Score=133.09 Aligned_cols=310 Identities=14% Similarity=0.121 Sum_probs=174.3
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003987 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 396 ~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
++..+.+.. ..-|+|-.|...-.+++..+.++. ..++.+..|..++.. + .++.+.....-+..|-.
T Consensus 131 FA~~i~~~~-~~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~----e--------~fr~lP~r~eiL~glL~ 197 (474)
T PF00982_consen 131 FADAIAEVY-RPGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPSS----E--------IFRCLPWREEILRGLLG 197 (474)
T ss_dssp HHHHHGGG---TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S----H----H--------HHTTSTTHHHHHHHHTT
T ss_pred HHHHHHHhC-cCCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCCH----H--------HHhhCCcHHHHHHHhhc
Confidence 334444432 367899999999877777777664 688889999765532 1 11112222334457889
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeec-cCCCCC--CceEEecCCCcCCCCCCCcH---HHHHHhhhhc
Q 003987 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVH-GIDVFD--PKFNIVSPGADMDIYFPYSE---KQKRLTALHG 548 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~-gi~~f~--~k~~VIpnGvD~~~f~p~~~---~~~r~~~~~~ 548 (781)
||.|-..|+..+..+.+...+.-.. -+.... ++.... -++.+.|-|||.+.+..... ...+...+
T Consensus 198 aDlIgFqt~~~~~nFl~~~~r~lg~-------~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l-- 268 (474)
T PF00982_consen 198 ADLIGFQTFEYARNFLSCCKRLLGL-------EVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEEL-- 268 (474)
T ss_dssp SSEEEESSHHHHHHHHHHHHHHS-E-------EEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHH--
T ss_pred CCEEEEecHHHHHHHHHHHHHHcCC-------cccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHH--
Confidence 9999999987766444333222100 000000 121112 25667899999876542211 11111111
Q ss_pred chhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHHH
Q 003987 549 SIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEI 624 (781)
Q Consensus 549 ~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~ 624 (781)
++.++ .+..+|+.+.|++..||+..=+.||.++.+.+| .+.|+-++.... +...+++
T Consensus 269 ------------~~~~~----~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr---~~~~~y~ 329 (474)
T PF00982_consen 269 ------------REKFK----GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSR---EDVPEYQ 329 (474)
T ss_dssp ------------HHHTT----T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-S---TTSHHHH
T ss_pred ------------HHhcC----CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccC---ccchhHH
Confidence 11121 224799999999999999999999999876655 577887776432 3444555
Q ss_pred HHHHHHHHHHHH----cCCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc----EEE
Q 003987 625 AEIEKMHELMKT----YKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP----TFA 694 (781)
Q Consensus 625 ~~~~~l~~li~e----lgL~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP----VVa 694 (781)
+..+++.+++.+ +|-.+ -|.++- ..++.++++.+++. +|+++.+|..+|..++..|+.+|-.+ +|.
T Consensus 330 ~~~~~v~~~v~~IN~~~g~~~~~PI~~~~---~~~~~~~~~aly~~-aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiL 405 (474)
T PF00982_consen 330 ELRREVEELVGRINGKYGTPDWTPIIYIY---RSLSFEELLALYRA-ADVALVTSLRDGMNLVAKEYVACQDDNPGVLIL 405 (474)
T ss_dssp HHHHHHHHHHHHHHHHH-BTTB-SEEEE----S---HHHHHHHHHH--SEEEE--SSBS--HHHHHHHHHS-TS--EEEE
T ss_pred HHHHHHHHHHHHHHhhcccCCceeEEEEe---cCCCHHHHHHHHHh-hhhEEecchhhccCCcceEEEEEecCCCCceEe
Confidence 666666666654 34322 255554 36789999999994 99999999999999999999999765 777
Q ss_pred cCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc
Q 003987 695 TCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVV 756 (781)
Q Consensus 695 T~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw 756 (781)
|...|.++.+.+ ..++|+|.|.+++|++|.+.++ .+++.++...+..++.+ ..+|-
T Consensus 406 SefaGaa~~L~~--~al~VNP~d~~~~A~ai~~AL~---M~~~Er~~r~~~~~~~v-~~~~~ 461 (474)
T PF00982_consen 406 SEFAGAAEQLSE--AALLVNPWDIEEVADAIHEALT---MPPEERKERHARLREYV-REHDV 461 (474)
T ss_dssp ETTBGGGGT-TT--S-EEE-TT-HHHHHHHHHHHHT-----HHHHHHHHHHHHHHH-HHT-H
T ss_pred eccCCHHHHcCC--ccEEECCCChHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-HhCCH
Confidence 888888888743 3599999999999999998884 56777777777777777 44443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.1e-10 Score=130.04 Aligned_cols=322 Identities=12% Similarity=0.055 Sum_probs=210.2
Q ss_pred HHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhh
Q 003987 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNN 474 (781)
Q Consensus 396 ~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~-~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~ 474 (781)
++..+.+... .-|+|-.|.....+++..+.++ ...++.+..|..++. ++++.. +..-..-...|-.
T Consensus 113 FA~~v~~~~~-~~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs----~eifr~--------LP~r~eil~glL~ 179 (474)
T PRK10117 113 LADKLLPLLK-DDDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPT----PEIFNA--------LPPHDELLEQLCD 179 (474)
T ss_pred HHHHHHHhcC-CCCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCC----hHHHhh--------CCChHHHHHHHHh
Confidence 3344444332 3489999999987777777665 357888899976553 222211 1111233457888
Q ss_pred CCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHH--HHHHhhhhcchhh
Q 003987 475 ADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK--QKRLTALHGSIEQ 552 (781)
Q Consensus 475 AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~--~~r~~~~~~~i~~ 552 (781)
+|.|=.-|+..+..+.+.+.+..... ...+......|- .-++.+.|-|||.+.|...... ..+...
T Consensus 180 aDlIGFqt~~y~rnFl~~~~~~lg~~--~~~~~~v~~~gr---~v~v~~~PigID~~~~~~~a~~~~~~~~~~------- 247 (474)
T PRK10117 180 YDLLGFQTENDRLAFLDCLSNLTRVT--TRSGKSHTAWGK---AFRTEVYPIGIEPDEIAKQAAGPLPPKLAQ------- 247 (474)
T ss_pred CccceeCCHHHHHHHHHHHHHHcCCc--ccCCCeEEECCe---EEEEEEEECeEcHHHHHHHhhchHHHHHHH-------
Confidence 99999999877664444332211000 001000000110 2357778999998776432111 111111
Q ss_pred hccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHHHHHHH
Q 003987 553 LLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIE 628 (781)
Q Consensus 553 ~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~ 628 (781)
.++.+ .++.+|+.+.|+|..||+..=++||+++.+.+| ++.|+-++.. ..+.-+++++...
T Consensus 248 -------lr~~~-----~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p---sR~~v~~Y~~l~~ 312 (474)
T PRK10117 248 -------LKAEL-----KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT---SRGDVQAYQDIRH 312 (474)
T ss_pred -------HHHHc-----CCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC---CCCccHHHHHHHH
Confidence 11122 356799999999999999999999999887665 5678877632 3344455566666
Q ss_pred HHHHHHHHc----CCCCc--EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC-----cEEEcCc
Q 003987 629 KMHELMKTY----KLDGQ--FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-----PTFATCH 697 (781)
Q Consensus 629 ~l~~li~el----gL~~~--V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-----PVVaT~~ 697 (781)
++.+++.+. |-.+. |+++- ..++.+++..+|+ +||+++.++..+|+.|+..|+.+|-. +.|.|..
T Consensus 313 ~v~~~vg~INg~fg~~~w~Pv~y~~---~~~~~~~l~alyr-~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSef 388 (474)
T PRK10117 313 QLETEAGRINGKYGQLGWTPLYYLN---QHFDRKLLMKIFR-YSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQF 388 (474)
T ss_pred HHHHHHHHHHhccCCCCceeEEEec---CCCCHHHHHHHHH-hccEEEecccccccccccchheeeecCCCCccEEEecc
Confidence 777776653 22221 34433 4678999999999 59999999999999999999999965 3788998
Q ss_pred cccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 698 GGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 698 gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
.|.++.+. ..++|+|.|.+++|++|.+.++ .+++.+++..+..++.+ .++|. ..+++.+-.-+.
T Consensus 389 AGaA~~L~---~AllVNP~d~~~~A~Ai~~AL~---Mp~~Er~~R~~~l~~~v-~~~dv--~~W~~~fL~~L~ 452 (474)
T PRK10117 389 AGAANELT---SALIVNPYDRDEVAAALDRALT---MPLAERISRHAEMLDVI-VKNDI--NHWQECFISDLK 452 (474)
T ss_pred cchHHHhC---CCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHh-hhCCH--HHHHHHHHHHHH
Confidence 89888883 4899999999999999998885 66777777777777777 44433 445555544444
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.7e-11 Score=118.13 Aligned_cols=166 Identities=16% Similarity=0.136 Sum_probs=86.1
Q ss_pred CCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccc
Q 003987 299 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQ 378 (781)
Q Consensus 299 p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~ 378 (781)
+..||.++++. +|+++|+++||+|+ |+|....+..... ............
T Consensus 9 ~~~GG~e~~~~--------~l~~~l~~~G~~v~----v~~~~~~~~~~~~------------~~~~~~~~~~~~------ 58 (177)
T PF13439_consen 9 PNIGGAERVVL--------NLARALAKRGHEVT----VVSPGVKDPIEEE------------LVKIFVKIPYPI------ 58 (177)
T ss_dssp TSSSHHHHHHH--------HHHHHHHHTT-EEE----EEESS-TTS-SST------------EEEE---TT-SS------
T ss_pred CCCChHHHHHH--------HHHHHHHHCCCEEE----EEEcCCCccchhh------------ccceeeeeeccc------
Confidence 45899999999 77788899999999 9977754432111 011111111100
Q ss_pred cccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCccc--CCCCChhhHhhhh
Q 003987 379 WISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKT--KYPDSDIYWKKFD 456 (781)
Q Consensus 379 ~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~--k~~~s~~~~k~~~ 456 (781)
.....+.......+.+.+.+. +|||||+|.+.....+....+ ++|.|.+.|+.... ...........+.
T Consensus 59 ----~~~~~~~~~~~~~~~~~i~~~---~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~~~~~~~~~~~~~~~ 129 (177)
T PF13439_consen 59 ----RKRFLRSFFFMRRLRRLIKKE---KPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFERRFLKSKLSPYSYLN 129 (177)
T ss_dssp ----TSS--HHHHHHHHHHHHHHHH---T-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--HHTTTTSCCCHHHHH
T ss_pred ----ccccchhHHHHHHHHHHHHHc---CCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccccccccccchhhhhh
Confidence 001111112333445555554 899999998766444444444 99999999986521 1000000000000
Q ss_pred ccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCC
Q 003987 457 EKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 533 (781)
Q Consensus 457 ~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f 533 (781)
. .......+.+|.+|++|...++.+.+ .|++ ..|+.|||||+|.+.|
T Consensus 130 -------~-~~~~~~~~~~~~ii~vS~~~~~~l~~--------------------~~~~--~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 130 -------F-RIERKLYKKADRIIAVSESTKDELIK--------------------FGIP--PEKIHVIYNGIDTDRF 176 (177)
T ss_dssp -------H-CTTHHHHCCSSEEEESSHHHHHHHHH--------------------HT----SS-EEE----B-CCCH
T ss_pred -------h-hhhhhHHhcCCEEEEECHHHHHHHHH--------------------hCCc--ccCCEEEECCccHHHc
Confidence 0 11223478999999999988663222 2443 6899999999999876
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.2e-11 Score=107.23 Aligned_cols=86 Identities=24% Similarity=0.440 Sum_probs=80.4
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 003987 668 AFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (781)
Q Consensus 668 vfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~ 747 (781)
+++.|+..++++..++|+||||+|||+++.++..+++.+|..++.++ |+++++++|..++ +||+.+++++++|+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll----~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLL----ENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHH----CCHHHHHHHHHHHH
Confidence 46778888999999999999999999999999999999999999998 9999999998877 89999999999999
Q ss_pred HHHHHhcCcchh
Q 003987 748 KRIYERLVVSSD 759 (781)
Q Consensus 748 ~~~~~~ysw~~~ 759 (781)
+++.++|||+..
T Consensus 75 ~~v~~~~t~~~~ 86 (92)
T PF13524_consen 75 ERVLKRHTWEHR 86 (92)
T ss_pred HHHHHhCCHHHH
Confidence 999999999764
|
|
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.4e-11 Score=118.14 Aligned_cols=160 Identities=19% Similarity=0.272 Sum_probs=85.1
Q ss_pred ccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCccccccccc
Q 003987 302 GGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWIS 381 (781)
Q Consensus 302 GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~is 381 (781)
||.+.|+. +|+++|.++||+|+ |+|...++.. .... ..++.+.++|........
T Consensus 1 GG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~----- 54 (160)
T PF13579_consen 1 GGIERYVR--------ELARALAARGHEVT----VVTPQPDPED------DEEE---EDGVRVHRLPLPRRPWPL----- 54 (160)
T ss_dssp SHHHHHHH--------HHHHHHHHTT-EEE----EEEE---GGG-------SEE---ETTEEEEEE--S-SSSGG-----
T ss_pred CCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCcc------cccc---cCCceEEeccCCccchhh-----
Confidence 79999999 77788899999999 9987644321 1111 236888898877642100
Q ss_pred ccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccc
Q 003987 382 RFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHF 461 (781)
Q Consensus 382 r~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f 461 (781)
..+. +...+.+.+ .....+||+||+|++..++++.++++..++|+|++.|+...... . .|. ...+
T Consensus 55 --~~~~----~~~~~~~~l-~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~--~--~~~--~~~~-- 119 (160)
T PF13579_consen 55 --RLLR----FLRRLRRLL-AARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRG--S--RWK--RRLY-- 119 (160)
T ss_dssp --GHCC----HHHHHHHHC-HHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------HH--HHHH--
T ss_pred --hhHH----HHHHHHHHH-hhhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhc--c--chh--hHHH--
Confidence 0111 112222223 22356999999999766777777776889999999997542211 1 111 1111
Q ss_pred hhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCC
Q 003987 462 SCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG 527 (781)
Q Consensus 462 ~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnG 527 (781)
...+...++.||.++++|+...+.+.+ .|++ .+|+.|||||
T Consensus 120 ---~~~~~~~~~~ad~vi~~S~~~~~~l~~--------------------~g~~--~~ri~vipnG 160 (160)
T PF13579_consen 120 ---RWLERRLLRRADRVIVVSEAMRRYLRR--------------------YGVP--PDRIHVIPNG 160 (160)
T ss_dssp ---HHHHHHHHHH-SEEEESSHHHHHHHHH--------------------H-----GGGEEE----
T ss_pred ---HHHHHHHHhcCCEEEECCHHHHHHHHH--------------------hCCC--CCcEEEeCcC
Confidence 123567899999999999988663221 2443 7899999998
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.4e-09 Score=114.58 Aligned_cols=301 Identities=16% Similarity=0.113 Sum_probs=162.9
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccc
Q 003987 301 TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWI 380 (781)
Q Consensus 301 ~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~i 380 (781)
|||-..-.+ .+++.|.++||+|. ++++...-.. .+ ++. .+..+..++....
T Consensus 11 TGGHi~Pal--------a~a~~l~~~g~~v~----~vg~~~~~e~------~l--~~~-~g~~~~~~~~~~l-------- 61 (352)
T PRK12446 11 SAGHVTPNL--------AIIPYLKEDNWDIS----YIGSHQGIEK------TI--IEK-ENIPYYSISSGKL-------- 61 (352)
T ss_pred cHHHHHHHH--------HHHHHHHhCCCEEE----EEECCCcccc------cc--Ccc-cCCcEEEEeccCc--------
Confidence 777655555 77788888999998 8875532210 11 111 1344444443221
Q ss_pred cccCch---hhHHHHH---HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhh
Q 003987 381 SRFDVW---PYLETFT---EDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKK 454 (781)
Q Consensus 381 sr~~i~---~yl~~f~---~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~ 454 (781)
++...+ .....+. ..+.+.++ ..+||+||++....+..+.++++.+++|+++.-.+..+ .
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~------g----- 127 (352)
T PRK12446 62 RRYFDLKNIKDPFLVMKGVMDAYVRIR---KLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTP------G----- 127 (352)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHH---hcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCc------c-----
Confidence 111011 1111111 12223333 34999999987777777889999999998653222110 0
Q ss_pred hhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCC
Q 003987 455 FDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYF 534 (781)
Q Consensus 455 ~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~ 534 (781)
.+.++....||.|.++-+.... +++ ..|+.++-|.+..+...
T Consensus 128 -----------~~nr~~~~~a~~v~~~f~~~~~-------------------------~~~--~~k~~~tG~Pvr~~~~~ 169 (352)
T PRK12446 128 -----------LANKIALRFASKIFVTFEEAAK-------------------------HLP--KEKVIYTGSPVREEVLK 169 (352)
T ss_pred -----------HHHHHHHHhhCEEEEEccchhh-------------------------hCC--CCCeEEECCcCCccccc
Confidence 1223566778888665432111 111 35667776666554432
Q ss_pred CCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEe-eccCCCChHHH-HHHHHHhhccCCCeEEEEEeCc
Q 003987 535 PYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMA-RLDHVKNMTGL-VECYGKNSQLRELVNLVVVAGY 612 (781)
Q Consensus 535 p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vG-RL~~~Kgl~~L-ieA~~~l~~~~~~v~LvIVG~g 612 (781)
+..... +..+|+ ++++++|+.+| ... .+.+..+ .+++..+. .+++++++.+.
T Consensus 170 ~~~~~~--------------------~~~~~l--~~~~~~iLv~GGS~G-a~~in~~~~~~l~~l~---~~~~vv~~~G~ 223 (352)
T PRK12446 170 GNREKG--------------------LAFLGF--SRKKPVITIMGGSLG-AKKINETVREALPELL---LKYQIVHLCGK 223 (352)
T ss_pred ccchHH--------------------HHhcCC--CCCCcEEEEECCccc-hHHHHHHHHHHHHhhc---cCcEEEEEeCC
Confidence 221111 123554 45667766664 444 3445333 33444443 24777665543
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcE
Q 003987 613 IDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPT 692 (781)
Q Consensus 613 ~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPV 692 (781)
.+ .++ ....+ .++...++. .+++..+|+ .+|++|.=+ =+.|+.|++++|+|.
T Consensus 224 ~~------------~~~---~~~~~---~~~~~~~f~-----~~~m~~~~~-~adlvIsr~----G~~t~~E~~~~g~P~ 275 (352)
T PRK12446 224 GN------------LDD---SLQNK---EGYRQFEYV-----HGELPDILA-ITDFVISRA----GSNAIFEFLTLQKPM 275 (352)
T ss_pred ch------------HHH---HHhhc---CCcEEecch-----hhhHHHHHH-hCCEEEECC----ChhHHHHHHHcCCCE
Confidence 22 111 11111 133444532 235778888 499888864 378999999999999
Q ss_pred EEcCcc---------ccccccccCCeEEEECCC--CHHHHHHHHHHHHHhccCCHHHHH
Q 003987 693 FATCHG---------GPAEIIEHGASGFHIDPY--HPDQAAELMADFFGKCKENPSHWK 740 (781)
Q Consensus 693 VaT~~g---------G~~EiI~dg~~G~lv~p~--d~~~lA~~I~~~l~~l~~dp~~~~ 740 (781)
|..... ..++.+.+...|..+... +++.+++.+.+++ .|++.++
T Consensus 276 I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll----~~~~~~~ 330 (352)
T PRK12446 276 LLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELS----HNNEKYK 330 (352)
T ss_pred EEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHH----cCHHHHH
Confidence 987432 123344455566666432 5678888887766 7876543
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.6e-08 Score=112.10 Aligned_cols=311 Identities=15% Similarity=0.157 Sum_probs=182.7
Q ss_pred cccceeehHHHHHHHHHHHHHHHHHCCCc-eeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCccccccc
Q 003987 301 TGGQVVYILDQVRALENEMLLRIKRQGLD-ISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQW 379 (781)
Q Consensus 301 ~GG~~vyvld~araL~~eLa~~L~~~Ghe-V~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~ 379 (781)
|||-.--.+ .+++.|.++|++ |. ++..... ..+......+..+..++.....
T Consensus 10 TGGHv~pAl--------Al~~~l~~~g~~~v~----~~~~~~~---------~e~~l~~~~~~~~~~I~~~~~~------ 62 (357)
T COG0707 10 TGGHVFPAL--------ALAEELAKRGWEQVI----VLGTGDG---------LEAFLVKQYGIEFELIPSGGLR------ 62 (357)
T ss_pred CccchhHHH--------HHHHHHHhhCccEEE----Eeccccc---------ceeeeccccCceEEEEeccccc------
Confidence 566555545 678889999997 43 4422211 1111111224666666655421
Q ss_pred ccccCchh------hHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHh
Q 003987 380 ISRFDVWP------YLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWK 453 (781)
Q Consensus 380 isr~~i~~------yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k 453 (781)
+...+. ++......+.+.+++ .+||+|++........+.++++.+|+|+++.-.+... ...|+
T Consensus 63 --~~~~~~~~~~~~~~~~~~~~a~~il~~---~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~------G~ank 131 (357)
T COG0707 63 --RKGSLKLLKAPFKLLKGVLQARKILKK---LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVP------GLANK 131 (357)
T ss_pred --ccCcHHHHHHHHHHHHHHHHHHHHHHH---cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCc------chhHH
Confidence 112222 111222333444444 3999999988888888889999999999876544322 12333
Q ss_pred hhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCC
Q 003987 454 KFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 533 (781)
Q Consensus 454 ~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f 533 (781)
+..+.|+.|.+.-... . .+.+ +.++.++-|.+..+..
T Consensus 132 ----------------~~~~~a~~V~~~f~~~-~------------------------~~~~--~~~~~~tG~Pvr~~~~ 168 (357)
T COG0707 132 ----------------ILSKFAKKVASAFPKL-E------------------------AGVK--PENVVVTGIPVRPEFE 168 (357)
T ss_pred ----------------HhHHhhceeeeccccc-c------------------------ccCC--CCceEEecCcccHHhh
Confidence 2344566554433211 0 0122 4567788887776655
Q ss_pred CCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEe-eccCCCChHHHHH-HHHHhhccCCCeEEEEEeC
Q 003987 534 FPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMA-RLDHVKNMTGLVE-CYGKNSQLRELVNLVVVAG 611 (781)
Q Consensus 534 ~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vG-RL~~~Kgl~~Lie-A~~~l~~~~~~v~LvIVG~ 611 (781)
. .+....+. .+ ..++++|+.+| ..+..+ +..++. +...+.+ +++++..++
T Consensus 169 ~-~~~~~~~~--------------------~~---~~~~~~ilV~GGS~Ga~~-ln~~v~~~~~~l~~---~~~v~~~~G 220 (357)
T COG0707 169 E-LPAAEVRK--------------------DG---RLDKKTILVTGGSQGAKA-LNDLVPEALAKLAN---RIQVIHQTG 220 (357)
T ss_pred c-cchhhhhh--------------------hc---cCCCcEEEEECCcchhHH-HHHHHHHHHHHhhh---CeEEEEEcC
Confidence 4 22222111 11 12566666655 444444 444443 3334432 577766665
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc
Q 003987 612 YIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP 691 (781)
Q Consensus 612 g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP 691 (781)
... .++++..-.+++. ++..++.. ++..+|+. +|+.|.=+ =++|+-|..++|+|
T Consensus 221 ~~~------------~~~~~~~~~~~~~---~~v~~f~~------dm~~~~~~-ADLvIsRa----Ga~Ti~E~~a~g~P 274 (357)
T COG0707 221 KND------------LEELKSAYNELGV---VRVLPFID------DMAALLAA-ADLVISRA----GALTIAELLALGVP 274 (357)
T ss_pred cch------------HHHHHHHHhhcCc---EEEeeHHh------hHHHHHHh-ccEEEeCC----cccHHHHHHHhCCC
Confidence 432 3445555555544 77777544 47888884 99998865 37999999999999
Q ss_pred EEEcCccc--------cccccccCCeEEEECCCC--HHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 692 TFATCHGG--------PAEIIEHGASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 692 VVaT~~gG--------~~EiI~dg~~G~lv~p~d--~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
+|--..+. .+..+++...|..++-.+ ++.+++.|.+++ .+|+..++|++++++..
T Consensus 275 ~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~----~~~~~l~~m~~~a~~~~ 339 (357)
T COG0707 275 AILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLL----SNPEKLKAMAENAKKLG 339 (357)
T ss_pred EEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHh----cCHHHHHHHHHHHHhcC
Confidence 99875433 334455666777776444 778888888777 88999999999987765
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.9e-09 Score=131.26 Aligned_cols=311 Identities=13% Similarity=0.113 Sum_probs=203.1
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.++..+.+.....-|+|..|.+...+++..+.++. ..++.+..|..++.. .+ |+-+.....-+..|-
T Consensus 189 ~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~----ei--------fr~LP~r~eiL~glL 256 (854)
T PLN02205 189 IFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSS----EI--------YKTLPIREELLRALL 256 (854)
T ss_pred HHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCCh----HH--------HhhCCcHHHHHHHHh
Confidence 34444444432123899999999888877776664 578889999765532 22 222222233456788
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC--ceEEecCCCcCCCCCCC---cHHHHHHhhhhc
Q 003987 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMDIYFPY---SEKQKRLTALHG 548 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~--k~~VIpnGvD~~~f~p~---~~~~~r~~~~~~ 548 (781)
.||.|=..|+..+..+.....+...... ...+ ...|+.+... ++.+.|-|||...|... ++...+...+
T Consensus 257 ~aDlIGFht~~yar~Fl~~~~r~lgl~~-~~~~---g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l-- 330 (854)
T PLN02205 257 NSDLIGFHTFDYARHFLSCCSRMLGLSY-ESKR---GYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKEL-- 330 (854)
T ss_pred cCCeEEecCHHHHHHHHHHHHHHhCCcc-cCCC---cceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHH--
Confidence 9999999998877654443322110000 0000 0012222223 56678999998776432 1111222111
Q ss_pred chhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC----eEEEEEeCcCCCCCCcchHHH
Q 003987 549 SIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL----VNLVVVAGYIDVNKSKDREEI 624 (781)
Q Consensus 549 ~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~----v~LvIVG~g~~~~~~~d~ee~ 624 (781)
+++++ .+++.+|+.+.|+|..||+..=+.||.++.+.+|. +.|+-+.--. .+..++++
T Consensus 331 ------------~~~~~---~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~ps---r~~~~~y~ 392 (854)
T PLN02205 331 ------------IKQFC---DQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPA---RGKGKDVK 392 (854)
T ss_pred ------------HHHhc---cCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCC---CcccHHHH
Confidence 12222 23578999999999999999999999999877775 4677665432 23344555
Q ss_pred HHHHHHHHHHHHc----CCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC--------
Q 003987 625 AEIEKMHELMKTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-------- 690 (781)
Q Consensus 625 ~~~~~l~~li~el----gL~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-------- 690 (781)
+...++.+++.+. |-.+ -|+++- ..++.+++..+|+ .||+++.++..+|+.|+..|+.+|..
T Consensus 393 ~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~---~~~~~~e~~aly~-~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~ 468 (854)
T PLN02205 393 EVQAETHSTVKRINETFGKPGYDPIVLID---APLKFYERVAYYV-VAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKL 468 (854)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCceEEEEe---cCCCHHHHHHHHH-hccEEEeccccccccccchheeEEccCccccccc
Confidence 6666666666553 3222 255554 3678999999999 59999999999999999999999854
Q ss_pred -----------cEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 003987 691 -----------PTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (781)
Q Consensus 691 -----------PVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~ 751 (781)
..|.|...|.+..+. ..++|+|.|.+++|++|.+.+. .+++.++..-+..++++.
T Consensus 469 ~~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~AL~---m~~~Er~~R~~~~~~~v~ 534 (854)
T PLN02205 469 LGLEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVADAMDSALE---MAEPEKQLRHEKHYRYVS 534 (854)
T ss_pred cccccccCCCCceEeeeccchhHHhC---cCeEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHh
Confidence 367788878777762 3799999999999999998884 566666665666666663
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.1e-09 Score=118.50 Aligned_cols=303 Identities=15% Similarity=0.107 Sum_probs=195.6
Q ss_pred CceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHH
Q 003987 407 FPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 407 kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
.-|+|..|...-.+++..+..+. ..++.+..|..++.. .++ +-+.+...-...+-.||+|-..++..
T Consensus 147 ~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPss----Evf--------r~lP~r~eIl~gll~~dligFqt~~y 214 (486)
T COG0380 147 PGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPSS----EVF--------RCLPWREEILEGLLGADLIGFQTESY 214 (486)
T ss_pred CCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCCH----HHH--------hhCchHHHHHHHhhcCCeeEecCHHH
Confidence 34999999999877777777665 467788899766543 211 11112223345677899999999877
Q ss_pred Hhhccccccccccccccccccceeeecc-CCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccccc
Q 003987 486 IAGTKNTVGQYESHTAFTLPGLYRVVHG-IDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564 (781)
Q Consensus 486 ~~~~k~~v~qyes~~~f~l~~ly~v~~g-i~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~ 564 (781)
+..+.+...+.... + +.-.+..+ .+-...++..+|=|+|...|........... .+.++ ++.+
T Consensus 215 ~~nF~~~~~r~~~~---~--~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~----~~~el-------~~~~ 278 (486)
T COG0380 215 ARNFLDLCSRLLGV---T--GDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQE----KVLEL-------KAEL 278 (486)
T ss_pred HHHHHHHHHHhccc---c--ccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhh----HHHHH-------HHHh
Confidence 66544443332100 0 00001111 1101235666899999876543221110000 00010 1111
Q ss_pred CCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC-C
Q 003987 565 GTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK-L 639 (781)
Q Consensus 565 g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elg-L 639 (781)
..++.+|+.+.|+|..||+..=+.||.++...+| .+.|+-++.... ..-++++....++.+++.+.+ .
T Consensus 279 ----~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr---~~v~~y~~~~~~i~~~V~rIN~~ 351 (486)
T COG0380 279 ----GRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSR---EDVEEYQALRLQIEELVGRINGE 351 (486)
T ss_pred ----cCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCc---cccHHHHHHHHHHHHHHHHHHhh
Confidence 2348899999999999999999999999987665 567777776544 222333344555555554432 2
Q ss_pred CCcEEEec--cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcC----CcEEEcCccccccccccCCeEEEE
Q 003987 640 DGQFRWIA--AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG----LPTFATCHGGPAEIIEHGASGFHI 713 (781)
Q Consensus 640 ~~~V~flG--~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~G----lPVVaT~~gG~~EiI~dg~~G~lv 713 (781)
-+.+.|.. +....++..+++.++. .+|+++..++.+|+.++..|+.+|- =|.|.|...|.+..+.+ .+++
T Consensus 352 fG~~~~~Pv~~l~~~~~~~~l~al~~-~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliV 427 (486)
T COG0380 352 FGSLSWTPVHYLHRDLDRNELLALYR-AADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIV 427 (486)
T ss_pred cCCCCcceeEEEeccCCHHHHHHHHh-hhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeE
Confidence 23333322 1123578899999999 5999999999999999999999984 47888888888887743 7999
Q ss_pred CCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q 003987 714 DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIY 751 (781)
Q Consensus 714 ~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~ 751 (781)
+|.|.+++|++|.+.+. .+++.+++.-+..++.+.
T Consensus 428 NP~d~~~va~ai~~AL~---m~~eEr~~r~~~~~~~v~ 462 (486)
T COG0380 428 NPWDTKEVADAIKRALT---MSLEERKERHEKLLKQVL 462 (486)
T ss_pred CCCChHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHH
Confidence 99999999999998885 677777776666777663
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.03 E-value=7.9e-09 Score=117.46 Aligned_cols=135 Identities=13% Similarity=0.133 Sum_probs=107.4
Q ss_pred HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCc
Q 003987 588 TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKG 667 (781)
Q Consensus 588 ~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aad 667 (781)
+..+++++++.+..|+++|.| |.+.+ ...+|.++ +++ ++.+.+.|..+ ..+-.++. .||
T Consensus 291 s~~I~~i~~Lv~~lPd~~f~I-ga~te-----------~s~kL~~L-~~y--~nvvly~~~~~-----~~l~~ly~-~~d 349 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYHFHI-AALTE-----------MSSKLMSL-DKY--DNVKLYPNITT-----QKIQELYQ-TCD 349 (438)
T ss_pred HHHHHHHHHHHHhCCCcEEEE-EecCc-----------ccHHHHHH-Hhc--CCcEEECCcCh-----HHHHHHHH-hcc
Confidence 999999999999999999999 65543 13577787 777 55566666433 34566666 499
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 003987 668 AFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 668 vfV~PS~~E~fGltvlEAMa~GlPVVaT~-~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
+++-.|..|+|++++.|||+.|+|||+.+ .-|+.+++.+ |.+++.+|+++++++|.+++ .||+.+++.-..=
T Consensus 350 lyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL----~d~~~~~~~~~~q 422 (438)
T TIGR02919 350 IYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLL----NDPNQFRELLEQQ 422 (438)
T ss_pred EEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHh----cCHHHHHHHHHHH
Confidence 99999999999999999999999999985 4467788865 88999999999999999888 8998776654444
Q ss_pred HHHH
Q 003987 747 LKRI 750 (781)
Q Consensus 747 ~~~~ 750 (781)
++.+
T Consensus 423 ~~~a 426 (438)
T TIGR02919 423 REHA 426 (438)
T ss_pred HHHh
Confidence 4443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.8e-08 Score=101.20 Aligned_cols=182 Identities=18% Similarity=0.146 Sum_probs=116.6
Q ss_pred ceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeec
Q 003987 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (781)
Q Consensus 278 ~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~ 357 (781)
|.||+|+...|.|. ..||.|+.+. +|+.+|+++||+|+ |.|+...... . ..
T Consensus 1 mkkIaIiGtrGIPa--------~YGGfET~ve--------~L~~~l~~~g~~v~----Vyc~~~~~~~------~---~~ 51 (185)
T PF09314_consen 1 MKKIAIIGTRGIPA--------RYGGFETFVE--------ELAPRLVSKGIDVT----VYCRSDYYPY------K---EF 51 (185)
T ss_pred CceEEEEeCCCCCc--------ccCcHHHHHH--------HHHHHHhcCCceEE----EEEccCCCCC------C---Cc
Confidence 35899999999985 4699999999 88999999999999 9998732211 1 12
Q ss_pred CCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCC-chHHHHHHHHH--cCCcEE
Q 003987 358 GTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSD-GNLVASLLAYK--MGITQC 434 (781)
Q Consensus 358 ~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~-~~lva~llar~--~gvp~v 434 (781)
...++++..+|.....+ .....|--.-...+...... -..+.|||+.+... ++++..++.+. .|.|++
T Consensus 52 ~y~gv~l~~i~~~~~g~--------~~si~yd~~sl~~al~~~~~-~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~v~ 122 (185)
T PF09314_consen 52 EYNGVRLVYIPAPKNGS--------AESIIYDFLSLLHALRFIKQ-DKIKYDIILILGYGIGPFFLPFLRKLRKKGGKVV 122 (185)
T ss_pred ccCCeEEEEeCCCCCCc--------hHHHHHHHHHHHHHHHHHhh-ccccCCEEEEEcCCccHHHHHHHHhhhhcCCcEE
Confidence 23478999998775321 11111110111111111111 02357899987776 45555555443 477999
Q ss_pred EEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccC
Q 003987 435 TIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGI 514 (781)
Q Consensus 435 ~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi 514 (781)
+..|++++.+ ..|..+...|- ...|..+.+.||.+|+-|....+-.++. .+
T Consensus 123 vN~DGlEWkR-----~KW~~~~k~~l----k~~E~~avk~ad~lIaDs~~I~~y~~~~-------------------y~- 173 (185)
T PF09314_consen 123 VNMDGLEWKR-----AKWGRPAKKYL----KFSEKLAVKYADRLIADSKGIQDYIKER-------------------YG- 173 (185)
T ss_pred ECCCcchhhh-----hhcCHHHHHHH----HHHHHHHHHhCCEEEEcCHHHHHHHHHH-------------------cC-
Confidence 9999998744 35555544432 1356789999999999998765522221 11
Q ss_pred CCCCCceEEecCCCc
Q 003987 515 DVFDPKFNIVSPGAD 529 (781)
Q Consensus 515 ~~f~~k~~VIpnGvD 529 (781)
..+..+|++|.|
T Consensus 174 ---~~~s~~IaYGad 185 (185)
T PF09314_consen 174 ---RKKSTFIAYGAD 185 (185)
T ss_pred ---CCCcEEecCCCC
Confidence 378899999987
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.2e-07 Score=104.51 Aligned_cols=123 Identities=15% Similarity=0.060 Sum_probs=81.8
Q ss_pred CCCCEEEEEeeccC---CCChHHHHHHHHHhhccCCCeEEE-EEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003987 570 RSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (781)
Q Consensus 570 ~~k~iIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~v~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~f 645 (781)
.+++++++.|+... .+-...+++++... +.+++ .+|.... . . ..+.++|.+
T Consensus 238 ~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~------------~-~-------~~~~~~v~~ 292 (401)
T cd03784 238 GRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGL------------G-A-------EDLPDNVRV 292 (401)
T ss_pred CCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccc------------c-c-------cCCCCceEE
Confidence 44567788888754 33445556666543 34544 4454433 0 0 245678999
Q ss_pred eccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCCeEEEECCC--CHH
Q 003987 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HPD 719 (781)
Q Consensus 646 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG----~~EiI~dg~~G~lv~p~--d~~ 719 (781)
.+ .++..++ +. .+|++|+-. -..|+.||+++|+|+|.....+ .++.++..+.|..+++. +.+
T Consensus 293 ~~----~~p~~~l---l~-~~d~~I~hg----G~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~~~~ 360 (401)
T cd03784 293 VD----FVPHDWL---LP-RCAAVVHHG----GAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRELTAE 360 (401)
T ss_pred eC----CCCHHHH---hh-hhheeeecC----CchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccCCHH
Confidence 98 4555555 44 599999652 2479999999999999985554 35556666678887765 688
Q ss_pred HHHHHHHHHH
Q 003987 720 QAAELMADFF 729 (781)
Q Consensus 720 ~lA~~I~~~l 729 (781)
++++++.+++
T Consensus 361 ~l~~al~~~l 370 (401)
T cd03784 361 RLAAALRRLL 370 (401)
T ss_pred HHHHHHHHHh
Confidence 8899998776
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.9e-07 Score=100.02 Aligned_cols=116 Identities=16% Similarity=0.214 Sum_probs=80.7
Q ss_pred CCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003987 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~ 649 (781)
+.+.+++++|..+.. .++++++.+ ++..++++|.... + ...++|++.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~--------------------~--~~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAA--------------------D--PRPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCcc--------------------c--ccCCCEEEeecC
Confidence 345688999987765 667777664 4688888876632 0 015789988743
Q ss_pred cCcCChHHHHHHHHccCcEEEEcCCCCCCcHH-HHHHHHcCCcEEEcCcccccc------ccccCCeEEEECCC--CHHH
Q 003987 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLT-VVEAMTCGLPTFATCHGGPAE------IIEHGASGFHIDPY--HPDQ 720 (781)
Q Consensus 650 ~~~v~~~el~~~la~aadvfV~PS~~E~fGlt-vlEAMa~GlPVVaT~~gG~~E------iI~dg~~G~lv~p~--d~~~ 720 (781)
..++.++|+. ||++|.-+ |.+ +.||+++|+|++.-...+..| .++..+.|..+++. +++.
T Consensus 241 -----~~~~~~~m~~-ad~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~ 309 (318)
T PF13528_consen 241 -----TPDFAELMAA-ADLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPER 309 (318)
T ss_pred -----hHHHHHHHHh-CCEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHH
Confidence 3578899995 99999874 555 999999999999986655333 34455567776533 5677
Q ss_pred HHHHHH
Q 003987 721 AAELMA 726 (781)
Q Consensus 721 lA~~I~ 726 (781)
+++.|.
T Consensus 310 l~~~l~ 315 (318)
T PF13528_consen 310 LAEFLE 315 (318)
T ss_pred HHHHHh
Confidence 777764
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=98.81 E-value=9e-09 Score=108.62 Aligned_cols=182 Identities=15% Similarity=0.119 Sum_probs=100.1
Q ss_pred eEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCcc-Ccceeeec-
Q 003987 280 NVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTC-NQRLERVS- 357 (781)
Q Consensus 280 rI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~-~~~~e~v~- 357 (781)
||++||.-..| .-.+||...++. .|+++|+++||+|. |+++.+........ ........
T Consensus 1 kIl~vt~E~~P-------~~k~GGLgdv~~--------~L~kaL~~~G~~V~----Vi~P~y~~~~~~~~~~~~~~~~~~ 61 (245)
T PF08323_consen 1 KILMVTSEYAP-------FAKVGGLGDVVG--------SLPKALAKQGHDVR----VIMPKYGFIDEEYFQLEPVRRLSV 61 (245)
T ss_dssp EEEEE-S-BTT-------TB-SSHHHHHHH--------HHHHHHHHTT-EEE----EEEE-THHHHHHCTTEEEEEEES-
T ss_pred CEEEEEcccCc-------ccccCcHhHHHH--------HHHHHHHhcCCeEE----EEEccchhhhhhhhcceEEEEecc
Confidence 79999987653 236899999999 67777899999999 99887633211100 00000000
Q ss_pred -------------------CCCCeEEEEeccCCCcccccccccccCch-------h-hHHH---HHHHHHHHHHHHcCCC
Q 003987 358 -------------------GTEHTHILRVPFRSEKGILRQWISRFDVW-------P-YLET---FTEDVGSEITAELQGF 407 (781)
Q Consensus 358 -------------------~~~~~~I~rvp~~~~~~~~~~~isr~~i~-------~-yl~~---f~~~~~~~i~~~~~~k 407 (781)
...++.++.+.... +.+|..++ + -.++ |+..+...+ ..+..+
T Consensus 62 ~~~~~v~~~~~~~~~v~~~~~~~v~v~~i~~~~-------~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~-~~l~~~ 133 (245)
T PF08323_consen 62 PFGGPVPVGVWYEVRVYRYPVDGVPVYFIDNPE-------YFDRPGIYGDNGGDYPDNAERFAFFSRAALELL-KKLGWK 133 (245)
T ss_dssp STTCEEEEE----EEEEEEEETTEEEEEEESHH-------HHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHH-CTCT-S
T ss_pred ccccccccccceEEEEEEEEcCCccEEEecChh-------hccccceeccCCCcchhHHHHHHHHHHHHHHHH-HhhCCC
Confidence 01234444442221 12222232 1 1223 333333333 323568
Q ss_pred ceEEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCcccCCCCC------hhhHhh--hhccccchhhhhHHHHHH
Q 003987 408 PDFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYPDS------DIYWKK--FDEKYHFSCQFTADLIAM 472 (781)
Q Consensus 408 pDIIh~~~~~~~lva~llar~~-------gvp~v~t~H~l~~~k~~~s------~~~~k~--~~~~y~f~~~~~~e~~a~ 472 (781)
|||||+|.|.+++++.+++... ++|+|+|+|++..+..... .+.+.. ....+.+...+...+.++
T Consensus 134 pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in~lk~gi 213 (245)
T PF08323_consen 134 PDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQINFLKAGI 213 (245)
T ss_dssp -SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEEHHHHHH
T ss_pred CCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccCHHHHHH
Confidence 9999999999999999998876 5999999999765532211 111111 111223333445566789
Q ss_pred hhCCEEEecCHHHHhh
Q 003987 473 NNADFIITSTYQEIAG 488 (781)
Q Consensus 473 ~~AD~IIt~S~~~~~~ 488 (781)
..||.|+|+|+..+..
T Consensus 214 ~~AD~v~TVS~~Ya~E 229 (245)
T PF08323_consen 214 VYADKVTTVSPTYARE 229 (245)
T ss_dssp HHSSEEEESSHHHHHH
T ss_pred HhcCEeeeCCHHHHHH
Confidence 9999999999988663
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.9e-06 Score=95.40 Aligned_cols=91 Identities=19% Similarity=0.213 Sum_probs=64.0
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCCeEEEEC
Q 003987 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHID 714 (781)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG----~~EiI~dg~~G~lv~ 714 (781)
+.++|.+.+ .++..+ ++. .+|++|..+- ..|+.|||++|+|+|+....+ ..+.+.+.+.|..++
T Consensus 273 ~~~~v~~~~----~~p~~~---ll~-~~~~~I~hgG----~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~ 340 (392)
T TIGR01426 273 LPPNVEVRQ----WVPQLE---ILK-KADAFITHGG----MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP 340 (392)
T ss_pred CCCCeEEeC----CCCHHH---HHh-hCCEEEECCC----chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec
Confidence 457899888 444444 455 5999998752 248999999999999974333 334455556787776
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHHHHHHHH
Q 003987 715 PY--HPDQAAELMADFFGKCKENPSHWKKISDG 745 (781)
Q Consensus 715 p~--d~~~lA~~I~~~l~~l~~dp~~~~~~s~~ 745 (781)
.. ++++++++|.+++ .|+++++++.+-
T Consensus 341 ~~~~~~~~l~~ai~~~l----~~~~~~~~~~~l 369 (392)
T TIGR01426 341 PEEVTAEKLREAVLAVL----SDPRYAERLRKM 369 (392)
T ss_pred cccCCHHHHHHHHHHHh----cCHHHHHHHHHH
Confidence 43 5788999998877 788876665443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.3e-06 Score=94.50 Aligned_cols=150 Identities=14% Similarity=0.239 Sum_probs=98.0
Q ss_pred CCCEE-EEEeec-c-CCCChHHHHHHHHHhhccCCCeEEEEEe-CcCCCCCCcchHHHHHHHHHHHHHHHcCCC------
Q 003987 571 SKPIV-FSMARL-D-HVKNMTGLVECYGKNSQLRELVNLVVVA-GYIDVNKSKDREEIAEIEKMHELMKTYKLD------ 640 (781)
Q Consensus 571 ~k~iI-l~vGRL-~-~~Kgl~~LieA~~~l~~~~~~v~LvIVG-~g~~~~~~~d~ee~~~~~~l~~li~elgL~------ 640 (781)
++++| +..|.- . ..+++..+++++.++.+. +++.+++.- ++.+ .+.+++..++.+..
T Consensus 204 ~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~------------~~~~~~~l~~~g~~~~~~~~ 270 (396)
T TIGR03492 204 GRFRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLS------------LEKLQAILEDLGWQLEGSSE 270 (396)
T ss_pred CCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCC------------HHHHHHHHHhcCceecCCcc
Confidence 34444 444443 2 357788999999999755 678887665 4433 34555555554543
Q ss_pred --------CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc---ccccccC--
Q 003987 641 --------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP---AEIIEHG-- 707 (781)
Q Consensus 641 --------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~---~EiI~dg-- 707 (781)
+++.+..+ ..+++.+++ +||++|..| |.+..|+|++|+|+|.....+. ..+.+..
T Consensus 271 ~~~~~~~~~~~~v~~~------~~~~~~~l~-~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~ 338 (396)
T TIGR03492 271 DQTSLFQKGTLEVLLG------RGAFAEILH-WADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSR 338 (396)
T ss_pred ccchhhccCceEEEec------hHhHHHHHH-hCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHh
Confidence 12454432 345788888 499999986 5666999999999999874443 2222321
Q ss_pred --CeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 003987 708 --ASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749 (781)
Q Consensus 708 --~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~ 749 (781)
..+..+...+++.+++.+.+++ .|++.+++|.+.++++
T Consensus 339 l~g~~~~l~~~~~~~l~~~l~~ll----~d~~~~~~~~~~~~~~ 378 (396)
T TIGR03492 339 LLGGSVFLASKNPEQAAQVVRQLL----ADPELLERCRRNGQER 378 (396)
T ss_pred hcCCEEecCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHh
Confidence 2344555567899999998877 8999888888544443
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.8e-06 Score=93.07 Aligned_cols=249 Identities=16% Similarity=0.162 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEcCC-CchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHH
Q 003987 391 TFTEDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADL 469 (781)
Q Consensus 391 ~f~~~~~~~i~~~~~~kpDIIh~~~~-~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~ 469 (781)
.....+.+.+.+. +||+|.++.. ...+.+.++|..+++|++. +|+-..+.. ..+... ..
T Consensus 80 ~~~~~~~~~~~~~---~Pd~vlv~GD~~~~la~alaA~~~~IPv~H-veaG~rs~~--------~~eE~~--------r~ 139 (365)
T TIGR03568 80 LTIIGFSDAFERL---KPDLVVVLGDRFEMLAAAIAAALLNIPIAH-IHGGEVTEG--------AIDESI--------RH 139 (365)
T ss_pred HHHHHHHHHHHHh---CCCEEEEeCCchHHHHHHHHHHHhCCcEEE-EECCccCCC--------CchHHH--------HH
Confidence 3333444445444 8999998884 4578889999999999874 344322110 011111 11
Q ss_pred HHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEe-cCCCcCCCCCCCcHHHHHHhhhhc
Q 003987 470 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIV-SPGADMDIYFPYSEKQKRLTALHG 548 (781)
Q Consensus 470 ~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VI-pnGvD~~~f~p~~~~~~r~~~~~~ 548 (781)
..-+-|+...+++....+.+.+ -|++ ..++.++ .+++|.-..........
T Consensus 140 ~i~~la~l~f~~t~~~~~~L~~--------------------eg~~--~~~i~~tG~~~iD~l~~~~~~~~~~------- 190 (365)
T TIGR03568 140 AITKLSHLHFVATEEYRQRVIQ--------------------MGED--PDRVFNVGSPGLDNILSLDLLSKEE------- 190 (365)
T ss_pred HHHHHHhhccCCCHHHHHHHHH--------------------cCCC--CCcEEEECCcHHHHHHhhhccCHHH-------
Confidence 2234467777788765442111 1333 4566665 44666432221111111
Q ss_pred chhhhccCccccccccCCCCCCCCCE-EEEEeecc--CC---CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchH
Q 003987 549 SIEQLLFDPEQNDEHVGTLSDRSKPI-VFSMARLD--HV---KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDRE 622 (781)
Q Consensus 549 ~i~~~l~~~~~~~~~~g~l~~~~k~i-Il~vGRL~--~~---Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~e 622 (781)
..+.+|+ ++++++ ++.+-+-. .. +.+..+++++..+ ..++ +++....++ .
T Consensus 191 -----------~~~~lgl--~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---~~~~--~vi~P~~~p------~ 246 (365)
T TIGR03568 191 -----------LEEKLGI--DLDKPYALVTFHPVTLEKESAEEQIKELLKALDEL---NKNY--IFTYPNADA------G 246 (365)
T ss_pred -----------HHHHhCC--CCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh---ccCC--EEEEeCCCC------C
Confidence 1133565 333344 44454432 33 3455555555443 2234 344322111 0
Q ss_pred HHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccc
Q 003987 623 EIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE 702 (781)
Q Consensus 623 e~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~E 702 (781)
+....+.+.++..+ .++|++++ +++..++..+++. |+++|--|. | .+.||.++|+|||. .|.-.|
T Consensus 247 ~~~i~~~i~~~~~~---~~~v~l~~----~l~~~~~l~Ll~~-a~~vitdSS----g-gi~EA~~lg~Pvv~--l~~R~e 311 (365)
T TIGR03568 247 SRIINEAIEEYVNE---HPNFRLFK----SLGQERYLSLLKN-ADAVIGNSS----S-GIIEAPSFGVPTIN--IGTRQK 311 (365)
T ss_pred chHHHHHHHHHhcC---CCCEEEEC----CCChHHHHHHHHh-CCEEEEcCh----h-HHHhhhhcCCCEEe--ecCCch
Confidence 11122333333211 46799998 7888999999996 999886542 2 34899999999995 467888
Q ss_pred ccccCCeEEEECCCCHHHHHHHHHHH
Q 003987 703 IIEHGASGFHIDPYHPDQAAELMADF 728 (781)
Q Consensus 703 iI~dg~~G~lv~p~d~~~lA~~I~~~ 728 (781)
.++.|.+++++ +.|++++.+++.++
T Consensus 312 ~~~~g~nvl~v-g~~~~~I~~a~~~~ 336 (365)
T TIGR03568 312 GRLRADSVIDV-DPDKEEIVKAIEKL 336 (365)
T ss_pred hhhhcCeEEEe-CCCHHHHHHHHHHH
Confidence 88888888888 45899999999774
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.9e-07 Score=86.01 Aligned_cols=123 Identities=22% Similarity=0.233 Sum_probs=80.1
Q ss_pred HHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHH
Q 003987 318 EMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVG 397 (781)
Q Consensus 318 eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~ 397 (781)
++++.|.++|++|+ |+|..... +.....+++.+++++.... ...+++. +. .+.
T Consensus 15 ~~~~~L~~~g~~V~----ii~~~~~~----------~~~~~~~~i~~~~~~~~~k-----------~~~~~~~-~~-~l~ 67 (139)
T PF13477_consen 15 NLAKELKKRGYDVH----IITPRNDY----------EKYEIIEGIKVIRLPSPRK-----------SPLNYIK-YF-RLR 67 (139)
T ss_pred HHHHHHHHCCCEEE----EEEcCCCc----------hhhhHhCCeEEEEecCCCC-----------ccHHHHH-HH-HHH
Confidence 66778899999999 99874221 1111233678888864421 1444553 22 455
Q ss_pred HHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcC-CcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhC
Q 003987 398 SEITAELQGFPDFIIGNYSDG-NLVASLLAYKMG-ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNA 475 (781)
Q Consensus 398 ~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~g-vp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~A 475 (781)
+.+.+. +||+||+|...+ ++++.++++..+ +|++++.|+...... .. ..+ .+++ ....+++.|
T Consensus 68 k~ik~~---~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~~--~~-~~~----~~~~-----~~~~~~k~~ 132 (139)
T PF13477_consen 68 KIIKKE---KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYNS--SK-KKK----LKKF-----IIKFAFKRA 132 (139)
T ss_pred HHhccC---CCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeecC--Cc-hHH----HHHH-----HHHHHHHhC
Confidence 555543 899999999887 788989999999 999999998644221 11 110 1111 234688999
Q ss_pred CEEEecC
Q 003987 476 DFIITST 482 (781)
Q Consensus 476 D~IIt~S 482 (781)
|.|++.|
T Consensus 133 ~~ii~~~ 139 (139)
T PF13477_consen 133 DKIIVQS 139 (139)
T ss_pred CEEEEcC
Confidence 9999875
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.3e-05 Score=84.77 Aligned_cols=263 Identities=15% Similarity=0.172 Sum_probs=166.6
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHH
Q 003987 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (781)
Q Consensus 407 kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (781)
+||+.+.-.+.....-..-+++.|+|++..-=-+.. .|-..|+.+ .+ .....+...|.|++-|+...
T Consensus 123 ~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS~----rS~~~y~k~-------~~--~~~~~~~~i~li~aQse~D~ 189 (419)
T COG1519 123 RPKLLIIMETELWPNLINELKRRGIPLVLVNARLSD----RSFARYAKL-------KF--LARLLFKNIDLILAQSEEDA 189 (419)
T ss_pred CCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeech----hhhHHHHHH-------HH--HHHHHHHhcceeeecCHHHH
Confidence 899988776665444455677889998864221111 011122222 22 13356788999999998776
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCceEEecCC-CcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccC
Q 003987 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (781)
Q Consensus 487 ~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g 565 (781)
+ +|.+. |+ .++.+.-|= .|.+ +.+........ .+.+++
T Consensus 190 ~-------Rf~~L-------------Ga----~~v~v~GNlKfd~~---~~~~~~~~~~~--------------~r~~l~ 228 (419)
T COG1519 190 Q-------RFRSL-------------GA----KPVVVTGNLKFDIE---PPPQLAAELAA--------------LRRQLG 228 (419)
T ss_pred H-------HHHhc-------------CC----cceEEecceeecCC---CChhhHHHHHH--------------HHHhcC
Confidence 5 23222 32 234443331 1111 11111111111 112233
Q ss_pred CCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCC----
Q 003987 566 TLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDG---- 641 (781)
Q Consensus 566 ~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~---- 641 (781)
..+++++..+. ...--+.+++++..+++.+|++.+++|=..|+ ..+...+++++.|+.-
T Consensus 229 ----~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE-----------Rf~~v~~l~~~~gl~~~~rS 291 (419)
T COG1519 229 ----GHRPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE-----------RFKAVENLLKRKGLSVTRRS 291 (419)
T ss_pred ----CCCceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh-----------hHHHHHHHHHHcCCeEEeec
Confidence 22677777776 33334558899999999999999999988875 4678888999988731
Q ss_pred --------cEEEeccccCcCChHHHHHHHHccCcE-EEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCC
Q 003987 642 --------QFRWIAAQTNRARNGELYRYIADTKGA-FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGA 708 (781)
Q Consensus 642 --------~V~flG~~~~~v~~~el~~~la~aadv-fV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~dg~ 708 (781)
.=.++| -..+|+..+|. .+|+ ||=-|+.+-=|--++|+.++|+|||.- +.....+-+...+
T Consensus 292 ~~~~~~~~tdV~l~-----DtmGEL~l~y~-~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~g 365 (419)
T COG1519 292 QGDPPFSDTDVLLG-----DTMGELGLLYG-IADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAG 365 (419)
T ss_pred CCCCCCCCCcEEEE-----ecHhHHHHHHh-hccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcC
Confidence 012333 14689999999 5886 555677766688899999999999986 3444444455566
Q ss_pred eEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Q 003987 709 SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752 (781)
Q Consensus 709 ~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~ 752 (781)
.|+.++ |.+.+++++..++ .|++.++++++++...+.+
T Consensus 366 a~~~v~--~~~~l~~~v~~l~----~~~~~r~~~~~~~~~~v~~ 403 (419)
T COG1519 366 AGLQVE--DADLLAKAVELLL----ADEDKREAYGRAGLEFLAQ 403 (419)
T ss_pred CeEEEC--CHHHHHHHHHHhc----CCHHHHHHHHHHHHHHHHH
Confidence 788887 5666777765444 8899999999999998864
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.50 E-value=2e-05 Score=86.45 Aligned_cols=75 Identities=13% Similarity=0.151 Sum_probs=53.9
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccc------ccccCCeEEEE
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE------IIEHGASGFHI 713 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~E------iI~dg~~G~lv 713 (781)
.+++.+.++. + .++..++.. +|++|.-+-+ .++.||+++|+|++.....+..| .+++.+.|..+
T Consensus 228 ~~~v~~~~~~----~-~~~~~~l~~-ad~vI~~~G~----~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l 297 (321)
T TIGR00661 228 NENVEIRRIT----T-DNFKELIKN-AELVITHGGF----SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL 297 (321)
T ss_pred CCCEEEEECC----h-HHHHHHHHh-CCEEEECCCh----HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc
Confidence 4688888742 2 478888895 9999998632 47999999999999987655333 45566778888
Q ss_pred CCCCHHHHHHHH
Q 003987 714 DPYHPDQAAELM 725 (781)
Q Consensus 714 ~p~d~~~lA~~I 725 (781)
+..+. ++.+++
T Consensus 298 ~~~~~-~~~~~~ 308 (321)
T TIGR00661 298 EYKEL-RLLEAI 308 (321)
T ss_pred ChhhH-HHHHHH
Confidence 77666 333333
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.9e-05 Score=84.40 Aligned_cols=262 Identities=15% Similarity=0.172 Sum_probs=139.6
Q ss_pred HHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHH
Q 003987 393 TEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA 471 (781)
Q Consensus 393 ~~~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a 471 (781)
...+...+.+. +||+|..+.-.. .+.++++|..+++|++ .+|+--.+. +..-...+...| ..+
T Consensus 56 ~~~~~~~~~~~---~Pd~Vlv~GD~~~~la~alaA~~~~ipv~-HieaGlRs~----d~~~g~~de~~R--------~~i 119 (346)
T PF02350_consen 56 IIELADVLERE---KPDAVLVLGDRNEALAAALAAFYLNIPVA-HIEAGLRSG----DRTEGMPDEINR--------HAI 119 (346)
T ss_dssp HHHHHHHHHHH---T-SEEEEETTSHHHHHHHHHHHHTT-EEE-EES-----S-----TTSSTTHHHHH--------HHH
T ss_pred HHHHHHHHHhc---CCCEEEEEcCCchHHHHHHHHHHhCCCEE-EecCCCCcc----ccCCCCchhhhh--------hhh
Confidence 33444445544 999999887554 6788999999999954 445421100 000001122111 123
Q ss_pred HhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecC-CCcCCCCCCCcHHHHHHhhhhcch
Q 003987 472 MNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSI 550 (781)
Q Consensus 472 ~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~i 550 (781)
-+-||.-+++|....+.+.+ -|++ ..++.++-| ++|.-.. .. ....+..
T Consensus 120 ~~la~lhf~~t~~~~~~L~~--------------------~G~~--~~rI~~vG~~~~D~l~~-----~~---~~~~~~~ 169 (346)
T PF02350_consen 120 DKLAHLHFAPTEEARERLLQ--------------------EGEP--PERIFVVGNPGIDALLQ-----NK---EEIEEKY 169 (346)
T ss_dssp HHH-SEEEESSHHHHHHHHH--------------------TT----GGGEEE---HHHHHHHH-----HH---HTTCC-H
T ss_pred hhhhhhhccCCHHHHHHHHh--------------------cCCC--CCeEEEEChHHHHHHHH-----hH---HHHhhhh
Confidence 45689999999877653222 2444 668877744 3332100 00 0000000
Q ss_pred hhhccCccccccccCCCC-CCCCCEEEEEeeccC---CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHH
Q 003987 551 EQLLFDPEQNDEHVGTLS-DRSKPIVFSMARLDH---VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAE 626 (781)
Q Consensus 551 ~~~l~~~~~~~~~~g~l~-~~~k~iIl~vGRL~~---~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~ 626 (781)
. ..++.. .+++.++++.=|... ......+.+++..+.+. +++++++.....+ ..
T Consensus 170 ~-----------~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~ 227 (346)
T PF02350_consen 170 K-----------NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RG 227 (346)
T ss_dssp H-----------HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HH
T ss_pred h-----------hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hH
Confidence 0 002211 233444555534332 34567788888888776 6788888887544 22
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHH-HHHHcCCcEEEc-Ccccccccc
Q 003987 627 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVV-EAMTCGLPTFAT-CHGGPAEII 704 (781)
Q Consensus 627 ~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvl-EAMa~GlPVVaT-~~gG~~EiI 704 (781)
...+.+..+++ ++|+++. +++..++..+++. +++.|-=| | .+. ||.++|+|||.- +.|.-.+.+
T Consensus 228 ~~~i~~~l~~~---~~v~~~~----~l~~~~~l~ll~~-a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r 293 (346)
T PF02350_consen 228 SDIIIEKLKKY---DNVRLIE----PLGYEEYLSLLKN-ADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGR 293 (346)
T ss_dssp HHHHHHHHTT----TTEEEE--------HHHHHHHHHH-ESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHH
T ss_pred HHHHHHHhccc---CCEEEEC----CCCHHHHHHHHhc-ceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHH
Confidence 44555555544 3899998 7888999999995 88777654 6 788 999999999998 456666676
Q ss_pred ccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 003987 705 EHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 742 (781)
Q Consensus 705 ~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~ 742 (781)
..+.+-+ +. .|.+++.++|.+++ .+++.+.++
T Consensus 294 ~~~~nvl-v~-~~~~~I~~ai~~~l----~~~~~~~~~ 325 (346)
T PF02350_consen 294 ERGSNVL-VG-TDPEAIIQAIEKAL----SDKDFYRKL 325 (346)
T ss_dssp HTTSEEE-ET-SSHHHHHHHHHHHH----H-HHHHHHH
T ss_pred hhcceEE-eC-CCHHHHHHHHHHHH----hChHHHHhh
Confidence 6666555 76 69999999998877 454444443
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.6e-05 Score=90.45 Aligned_cols=187 Identities=11% Similarity=0.077 Sum_probs=120.5
Q ss_pred cccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003987 558 EQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (781)
Q Consensus 558 ~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el 637 (781)
...|+.+|+ +.+..++++..++ .|=-...++++.++.+.-|+.+|++...... ..+.+++.+.+.
T Consensus 273 ~~~R~~~gL--p~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-----------~~~~l~~~~~~~ 337 (468)
T PF13844_consen 273 VTTRAQYGL--PEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPAS-----------GEARLRRRFAAH 337 (468)
T ss_dssp EEETGGGT----SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETSTT-----------HHHHHHHHHHHT
T ss_pred ccCHHHcCC--CCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-----------HHHHHHHHHHHc
Confidence 345788999 5566555555554 5666888999999988889999998875432 135788889999
Q ss_pred CCC-CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccccc-----c-cCCeE
Q 003987 638 KLD-GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEII-----E-HGASG 710 (781)
Q Consensus 638 gL~-~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI-----~-dg~~G 710 (781)
|+. ++|.|.+ ..+.++-.+.+.. +|+++=|-.+-| |.|.+||+.+|+|||+-.....+.-+ . -|-..
T Consensus 338 Gv~~~Ri~f~~----~~~~~ehl~~~~~-~DI~LDT~p~nG-~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~E 411 (468)
T PF13844_consen 338 GVDPDRIIFSP----VAPREEHLRRYQL-ADICLDTFPYNG-GTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPE 411 (468)
T ss_dssp TS-GGGEEEEE-------HHHHHHHGGG--SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GG
T ss_pred CCChhhEEEcC----CCCHHHHHHHhhh-CCEEeeCCCCCC-cHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCch
Confidence 986 7899988 5556677777774 999999854444 78999999999999986422222111 1 12233
Q ss_pred EEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003987 711 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 711 ~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
++. .|.++..+.-.++. .|++.++++++.-+++..+.-=|+....++..|+.+..
T Consensus 412 lIA--~s~~eYv~~Av~La----~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 412 LIA--DSEEEYVEIAVRLA----TDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp GB---SSHHHHHHHHHHHH----H-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHH
T ss_pred hcC--CCHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHH
Confidence 333 37899988887776 89999999999998888666567777777777777653
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.26 E-value=0.00012 Score=78.96 Aligned_cols=97 Identities=14% Similarity=0.248 Sum_probs=70.6
Q ss_pred CCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEE-EEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003987 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~ 650 (781)
+.+++++|..+..+....+++++.++. +++++. |+|.+.. ..+++++.++.. ++|++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~-----------~~~~l~~~~~~~---~~i~~~~~-- 231 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNP-----------NLDELKKFAKEY---PNIILFID-- 231 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCc-----------CHHHHHHHHHhC---CCEEEEeC--
Confidence 457899999998776678888887653 344443 5565533 135566666553 47888874
Q ss_pred CcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc
Q 003987 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH 697 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~ 697 (781)
..++..+|+. +|++|.+ -|.|+.|++++|+|+|+...
T Consensus 232 ----~~~m~~lm~~-aDl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 232 ----VENMAELMNE-ADLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred ----HHHHHHHHHH-CCEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 3468889995 9999995 57999999999999998754
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.00097 Score=77.85 Aligned_cols=138 Identities=14% Similarity=0.013 Sum_probs=90.2
Q ss_pred CCEEEEEeeccCC-----CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003987 572 KPIVFSMARLDHV-----KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 572 k~iIl~vGRL~~~-----Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~fl 646 (781)
++++++.|..... +-+..+++|++++. .++++..++.. .. .+++++|.+.
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~viw~~~~~~------------~~--------~~~p~Nv~i~ 351 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNVLWKYDGEV------------EA--------INLPANVLTQ 351 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeEEEEECCCc------------Cc--------ccCCCceEEe
Confidence 4678889987532 23456667776553 46665555422 00 2457889988
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccCCeEEEECCC--CHHH
Q 003987 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHGASGFHIDPY--HPDQ 720 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~----~gG~~EiI~dg~~G~lv~p~--d~~~ 720 (781)
+ ++|..++... . .+++||.= |=..++.||+.+|+|+|+.. ....+..++..+.|..++.. +.++
T Consensus 352 ~----w~Pq~~lL~h-p-~v~~fItH----GG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~ 421 (507)
T PHA03392 352 K----WFPQRAVLKH-K-NVKAFVTQ----GGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQ 421 (507)
T ss_pred c----CCCHHHHhcC-C-CCCEEEec----CCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHH
Confidence 8 5555555421 2 36788875 22568999999999999973 34455566666788888754 5678
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 003987 721 AAELMADFFGKCKENPSHWKKISDGGLK 748 (781)
Q Consensus 721 lA~~I~~~l~~l~~dp~~~~~~s~~a~~ 748 (781)
+.++|.+++ .||.+++...+-+..
T Consensus 422 l~~ai~~vl----~~~~y~~~a~~ls~~ 445 (507)
T PHA03392 422 LVLAIVDVI----ENPKYRKNLKELRHL 445 (507)
T ss_pred HHHHHHHHh----CCHHHHHHHHHHHHH
Confidence 888887777 888877765554433
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00046 Score=77.12 Aligned_cols=241 Identities=21% Similarity=0.202 Sum_probs=139.3
Q ss_pred CCCceEEEEcC-CCchHHHHHHHHHcCCc--EEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEec
Q 003987 405 QGFPDFIIGNY-SDGNLVASLLAYKMGIT--QCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481 (781)
Q Consensus 405 ~~kpDIIh~~~-~~~~lva~llar~~gvp--~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 481 (781)
..+||+++.-+ ++.|+-.....|+.|++ +++.+- + +-+.|+.-. -...-+.+|.+++.
T Consensus 80 ~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~---P-----qvWAWr~~R-----------~~~i~~~~D~ll~i 140 (373)
T PF02684_consen 80 EEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS---P-----QVWAWRPGR-----------AKKIKKYVDHLLVI 140 (373)
T ss_pred HcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC---C-----ceeeeCccH-----------HHHHHHHHhheeEC
Confidence 45999999555 55587777777788877 654431 1 112232111 11234567888888
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCC-CcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003987 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 482 S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (781)
=+-|.+ -|+. +| -++..|-|. +|.-...+. ....
T Consensus 141 fPFE~~-------~y~~-------------~g-----~~~~~VGHPl~d~~~~~~~--~~~~------------------ 175 (373)
T PF02684_consen 141 FPFEPE-------FYKK-------------HG-----VPVTYVGHPLLDEVKPEPD--RAEA------------------ 175 (373)
T ss_pred CcccHH-------HHhc-------------cC-----CCeEEECCcchhhhccCCC--HHHH------------------
Confidence 776654 1221 12 245555443 343221111 1111
Q ss_pred ccccCCCCCCCCCEEEE-Ee-eccC-CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003987 561 DEHVGTLSDRSKPIVFS-MA-RLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~-vG-RL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el 637 (781)
++++ + ++++++|.. .| |-.+ .+.+..++++++++.+.+|++++++...... ..+.+.+.....
T Consensus 176 ~~~~-l--~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~-----------~~~~i~~~~~~~ 241 (373)
T PF02684_consen 176 REKL-L--DPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV-----------HEELIEEILAEY 241 (373)
T ss_pred HHhc-C--CCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH-----------HHHHHHHHHHhh
Confidence 1223 3 456666544 44 4444 4455888999999999999999998765432 123355555555
Q ss_pred CCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-cc----------------cc
Q 003987 638 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HG----------------GP 700 (781)
Q Consensus 638 gL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~-~g----------------G~ 700 (781)
+..-.+.... ++-+..++. ||+.+..| |.+.+|++.+|+|.|..- .+ |+
T Consensus 242 ~~~~~~~~~~--------~~~~~~m~~-ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL 307 (373)
T PF02684_consen 242 PPDVSIVIIE--------GESYDAMAA-ADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISL 307 (373)
T ss_pred CCCCeEEEcC--------CchHHHHHh-CcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeec
Confidence 5433344332 256778884 99888876 999999999999999863 22 22
Q ss_pred ccccccCC--eEEEECCCCHHHHHHHHHHHHHhccCCHHHHHH
Q 003987 701 AEIIEHGA--SGFHIDPYHPDQAAELMADFFGKCKENPSHWKK 741 (781)
Q Consensus 701 ~EiI~dg~--~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~ 741 (781)
+.++-+.. --++-+.-+++.+++++.+++ .|++.++.
T Consensus 308 ~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll----~~~~~~~~ 346 (373)
T PF02684_consen 308 PNIIAGREVVPELIQEDATPENIAAELLELL----ENPEKRKK 346 (373)
T ss_pred hhhhcCCCcchhhhcccCCHHHHHHHHHHHh----cCHHHHHH
Confidence 22221111 112223458899999998877 78776444
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.0018 Score=71.54 Aligned_cols=62 Identities=16% Similarity=0.188 Sum_probs=44.1
Q ss_pred HHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc---cccccccCCeEEEECCCCHHHHHHHHHHH
Q 003987 659 YRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG---PAEIIEHGASGFHIDPYHPDQAAELMADF 728 (781)
Q Consensus 659 ~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG---~~EiI~dg~~G~lv~p~d~~~lA~~I~~~ 728 (781)
..+++- ||++|-- -|....||...|+|+|.+..|- .-+.+. +.|+++...|++++.+.+...
T Consensus 243 ~~Ll~~-a~l~Ig~-----ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~ 307 (335)
T PF04007_consen 243 LDLLYY-ADLVIGG-----GGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKN 307 (335)
T ss_pred HHHHHh-cCEEEeC-----CcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHh
Confidence 356663 8888865 3677899999999999875442 223332 347888888999988866543
|
They are found in archaea and some bacteria and have no known function. |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.89 E-value=3.2e-05 Score=84.91 Aligned_cols=94 Identities=28% Similarity=0.356 Sum_probs=64.3
Q ss_pred HHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccc----cccccC-CeEEEE-C------CCCHHHHHHHHHH
Q 003987 660 RYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPA----EIIEHG-ASGFHI-D------PYHPDQAAELMAD 727 (781)
Q Consensus 660 ~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~----EiI~dg-~~G~lv-~------p~d~~~lA~~I~~ 727 (781)
.+.. .+.+.|+||+||++|.|..|.-.+|+|-|.|+..|.. |.|++. ..|+.+ | ....++++.-+.+
T Consensus 496 eFVR-GCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~ 574 (692)
T KOG3742|consen 496 EFVR-GCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYE 574 (692)
T ss_pred HHhc-cccccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHH
Confidence 3444 5999999999999999999999999999999987754 444432 346654 2 1234455555555
Q ss_pred HHHhccCCHHHHHHHHHHH-HHHHHHhcCcchh
Q 003987 728 FFGKCKENPSHWKKISDGG-LKRIYERLVVSSD 759 (781)
Q Consensus 728 ~l~~l~~dp~~~~~~s~~a-~~~~~~~ysw~~~ 759 (781)
|. ....|+++.++. -++..+-.+|+.+
T Consensus 575 F~-----~qsRRQRIiqRNrtErLSdLLDWk~l 602 (692)
T KOG3742|consen 575 FC-----KQSRRQRIIQRNRTERLSDLLDWKYL 602 (692)
T ss_pred HH-----HHHHHHHHHHhcchhhHHHHHhHHHH
Confidence 43 345566665544 3566667788766
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.017 Score=66.70 Aligned_cols=139 Identities=13% Similarity=0.131 Sum_probs=78.9
Q ss_pred CCCEEEEEeeccC--CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003987 571 SKPIVFSMARLDH--VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 571 ~k~iIl~vGRL~~--~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~ 648 (781)
...+.++.|.... .+-+..++++++.. +..++++..+.. ..+.+.. .+++...+
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~~-------------~~~~~~~-----~~~~~v~~- 329 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDS-----GVRFLWVARGEA-------------SRLKEIC-----GDMGLVVP- 329 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhC-----CCCEEEEEcCch-------------hhHhHhc-----cCCEEEec-
Confidence 4467788887643 22345555555543 457776654321 0111111 24566666
Q ss_pred ccCcCChHHHHHHHHccCcE--EEEcCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccC-CeEEEECC------
Q 003987 649 QTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHG-ASGFHIDP------ 715 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVVaT~----~gG~~EiI~dg-~~G~lv~p------ 715 (781)
+++..++.. ..++ ||.= +=-.+++||+++|+|+|+-. ....+..+.+. +.|+-+..
T Consensus 330 ---w~pQ~~iL~----h~~v~~fvtH----gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~ 398 (459)
T PLN02448 330 ---WCDQLKVLC----HSSVGGFWTH----CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEET 398 (459)
T ss_pred ---cCCHHHHhc----cCccceEEec----CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCC
Confidence 555556655 3443 5553 22358999999999999963 34445555542 45666631
Q ss_pred -CCHHHHHHHHHHHHHhccCCH-HHHHHHHHHHHH
Q 003987 716 -YHPDQAAELMADFFGKCKENP-SHWKKISDGGLK 748 (781)
Q Consensus 716 -~d~~~lA~~I~~~l~~l~~dp-~~~~~~s~~a~~ 748 (781)
-+.+++++++.+++ .++ +..++|.+++.+
T Consensus 399 ~~~~~~l~~av~~vl----~~~~~~~~~~r~~a~~ 429 (459)
T PLN02448 399 LVGREEIAELVKRFM----DLESEEGKEMRRRAKE 429 (459)
T ss_pred cCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 36788888888877 553 334444444443
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00058 Score=77.53 Aligned_cols=136 Identities=14% Similarity=0.117 Sum_probs=91.9
Q ss_pred CCCEEEEEeeccCCCChHHHHHHH-HHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003987 571 SKPIVFSMARLDHVKNMTGLVECY-GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl~~LieA~-~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~ 649 (781)
.+++.++.|..... ..+++.+ ..+... ++++++..++.+ . ..-++++++...+
T Consensus 237 ~~~vyvslGt~~~~---~~l~~~~~~a~~~l--~~~vi~~~~~~~------------------~-~~~~~p~n~~v~~-- 290 (406)
T COG1819 237 RPIVYVSLGTVGNA---VELLAIVLEALADL--DVRVIVSLGGAR------------------D-TLVNVPDNVIVAD-- 290 (406)
T ss_pred CCeEEEEcCCcccH---HHHHHHHHHHHhcC--CcEEEEeccccc------------------c-ccccCCCceEEec--
Confidence 44556777776654 3333332 233232 577777776522 0 1235678898887
Q ss_pred cCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccCCeEEEEC--CCCHHHHHH
Q 003987 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHGASGFHID--PYHPDQAAE 723 (781)
Q Consensus 650 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~----~gG~~EiI~dg~~G~lv~--p~d~~~lA~ 723 (781)
.++..++.. .+|++|+.. | -.++.||+.+|+|+|+-- ....++-+++-..|..+. ..+.+.+++
T Consensus 291 --~~p~~~~l~----~ad~vI~hG---G-~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~ 360 (406)
T COG1819 291 --YVPQLELLP----RADAVIHHG---G-AGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRA 360 (406)
T ss_pred --CCCHHHHhh----hcCEEEecC---C-cchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHH
Confidence 555556544 699999983 3 348899999999999963 334666777778898887 579999999
Q ss_pred HHHHHHHhccCCHHHHHHHHHHH
Q 003987 724 LMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 724 ~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
+|.+++ .|+.+++...+..
T Consensus 361 av~~vL----~~~~~~~~~~~~~ 379 (406)
T COG1819 361 AVNEVL----ADDSYRRAAERLA 379 (406)
T ss_pred HHHHHh----cCHHHHHHHHHHH
Confidence 998887 7887766655433
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0073 Score=70.82 Aligned_cols=250 Identities=16% Similarity=0.173 Sum_probs=134.3
Q ss_pred CCCceEEEEc-CCCchHHHHHHHHHcCC--cEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEec
Q 003987 405 QGFPDFIIGN-YSDGNLVASLLAYKMGI--TQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481 (781)
Q Consensus 405 ~~kpDIIh~~-~~~~~lva~llar~~gv--p~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 481 (781)
..+||++++- +++.|+-....+|+.|+ |+++.+- + +-+.|+.-. -...-+.+|.++|.
T Consensus 308 ~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVs---P-----qVWAWR~~R-----------ikki~k~vD~ll~I 368 (608)
T PRK01021 308 KTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVC---P-----SIWAWRPKR-----------KTILEKYLDLLLLI 368 (608)
T ss_pred hcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEEC---c-----cceeeCcch-----------HHHHHHHhhhheec
Confidence 4599999964 45558766667777885 8775442 1 112232111 11234567888887
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCC-CcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003987 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 482 S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (781)
=+-|.+ +|+. +|+ +++.|-|. +|.-...+.....
T Consensus 369 fPFE~~-------------------~y~~-~gv-----~v~yVGHPL~d~i~~~~~~~~~-------------------- 403 (608)
T PRK01021 369 LPFEQN-------------------LFKD-SPL-----RTVYLGHPLVETISSFSPNLSW-------------------- 403 (608)
T ss_pred CccCHH-------------------HHHh-cCC-----CeEEECCcHHhhcccCCCHHHH--------------------
Confidence 776644 2221 232 44455433 3442212222111
Q ss_pred ccccCCCCCCCCCEE-EEEe-eccC-CCChHHHHHHHH--HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH
Q 003987 561 DEHVGTLSDRSKPIV-FSMA-RLDH-VKNMTGLVECYG--KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (781)
Q Consensus 561 ~~~~g~l~~~~k~iI-l~vG-RL~~-~Kgl~~LieA~~--~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~ 635 (781)
++++|+ ++++++| +..| |-.+ .+.+..+++++. ++.+ +.++++.... . ...+.+++..+
T Consensus 404 r~~lgl--~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~---~l~fvvp~a~-~----------~~~~~i~~~~~ 467 (608)
T PRK01021 404 KEQLHL--PSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAS---THQLLVSSAN-P----------KYDHLILEVLQ 467 (608)
T ss_pred HHHcCC--CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhcc---CeEEEEecCc-h----------hhHHHHHHHHh
Confidence 234666 4455655 3444 4444 556677888887 4433 5777664322 1 11344455554
Q ss_pred HcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-cc----------------
Q 003987 636 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HG---------------- 698 (781)
Q Consensus 636 elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~-~g---------------- 698 (781)
..++ -.+..+. ..+-+..++ +||+.+..| |.+.+|++.+|+|.|..- .+
T Consensus 468 ~~~~-~~~~ii~-------~~~~~~~m~-aaD~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~ 533 (608)
T PRK01021 468 QEGC-LHSHIVP-------SQFRYELMR-ECDCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILP 533 (608)
T ss_pred hcCC-CCeEEec-------CcchHHHHH-hcCeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCC
Confidence 3331 1234432 012367777 599998886 999999999999999862 22
Q ss_pred --ccccccccCC-eEEEE---CCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003987 699 --GPAEIIEHGA-SGFHI---DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 699 --G~~EiI~dg~-~G~lv---~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~y 754 (781)
+.+.++.+.. .=-++ +.-+++.+++++ +++ .|++.++++.+. .+.+.+..
T Consensus 534 yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL----~d~~~r~~~~~~-l~~lr~~L 589 (608)
T PRK01021 534 AYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DIL----KTSQSKEKQKDA-CRDLYQAM 589 (608)
T ss_pred eeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHh----cCHHHHHHHHHH-HHHHHHHh
Confidence 1122221111 01122 234788888885 655 788877776654 34444433
|
|
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0023 Score=70.58 Aligned_cols=200 Identities=19% Similarity=0.166 Sum_probs=116.1
Q ss_pred CCCceEEEEcCCC-chHHHHHHHHHcC--CcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEec
Q 003987 405 QGFPDFIIGNYSD-GNLVASLLAYKMG--ITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481 (781)
Q Consensus 405 ~~kpDIIh~~~~~-~~lva~llar~~g--vp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~ 481 (781)
..+||++++-++. .|+-....-|+.| +|+|+.+- + +-+.|+.-. -....+.+|++.+.
T Consensus 83 ~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~---P-----sVWAWr~~R-----------a~~i~~~~D~lLai 143 (381)
T COG0763 83 ANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS---P-----SVWAWRPKR-----------AVKIAKYVDHLLAI 143 (381)
T ss_pred hcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC---c-----ceeeechhh-----------HHHHHHHhhHeeee
Confidence 4599999976655 4655444455556 77775442 1 223343221 12356789999998
Q ss_pred CHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecC-CCcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003987 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 482 S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (781)
=+-|.+ +|.. .|+ ..+.|-+ =+|.-.+.+.... .
T Consensus 144 lPFE~~-------------------~y~k-~g~-----~~~yVGHpl~d~i~~~~~r~~--------------------a 178 (381)
T COG0763 144 LPFEPA-------------------FYDK-FGL-----PCTYVGHPLADEIPLLPDREA--------------------A 178 (381)
T ss_pred cCCCHH-------------------HHHh-cCC-----CeEEeCChhhhhccccccHHH--------------------H
Confidence 876654 1211 111 2344433 3343333333322 1
Q ss_pred ccccCCCCCCCCCE-EEEEee-ccC-CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003987 561 DEHVGTLSDRSKPI-VFSMAR-LDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (781)
Q Consensus 561 ~~~~g~l~~~~k~i-Il~vGR-L~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el 637 (781)
++.+|+ +.++++ .+..|+ -.+ .+....+++++.+++++.|+.++++--.... .+.+.....+.
T Consensus 179 r~~l~~--~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~------------~~~~~~~~~~~ 244 (381)
T COG0763 179 REKLGI--DADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK------------YRRIIEEALKW 244 (381)
T ss_pred HHHhCC--CCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH------------HHHHHHHHhhc
Confidence 245777 555555 444453 333 5566778899999998999999998776543 22333333222
Q ss_pred CC-CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 003987 638 KL-DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (781)
Q Consensus 638 gL-~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~ 696 (781)
.. ...+... .++-+..++ +||+.+..| |.+.+|+|.+|+|.|.+.
T Consensus 245 ~~~~~~~~~~--------~~~~~~a~~-~aD~al~aS-----GT~tLE~aL~g~P~Vv~Y 290 (381)
T COG0763 245 EVAGLSLILI--------DGEKRKAFA-AADAALAAS-----GTATLEAALAGTPMVVAY 290 (381)
T ss_pred cccCceEEec--------CchHHHHHH-HhhHHHHhc-----cHHHHHHHHhCCCEEEEE
Confidence 21 1223333 235566777 489877765 999999999999999873
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0032 Score=75.91 Aligned_cols=151 Identities=13% Similarity=0.121 Sum_probs=110.3
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHH-HHHH---HHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-LVEC---YGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~-LieA---~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
+.|+..+++...++++-|+..+|.... ++.. +.+++..- ....+++.|...+ .|..-...++.+.+++
T Consensus 534 ~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIk~I~~va 609 (815)
T PRK14986 534 QLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAAS----AYYMAKHIIHLINDVA 609 (815)
T ss_pred HhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 347766888889999999999999888 5444 55554431 1366666665543 3455566677777777
Q ss_pred H----HcCCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 635 K----TYKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 635 ~----elgL~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
+ +-.+.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..=+=||.-|.++++|-.|...|+.++
T Consensus 610 ~~in~Dp~v~~~lkVVFle----nY~v-slAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~ 684 (815)
T PRK14986 610 KVINNDPQIGDKLKVVFIP----NYSV-SLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEH 684 (815)
T ss_pred HHhccChhhcCceeEEEeC----CCCH-HHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHh
Confidence 6 222344 788886 3333 455555557999999875 89999999999999999999999999999986
Q ss_pred --CCeEEEECCCCHHHHHH
Q 003987 707 --GASGFHIDPYHPDQAAE 723 (781)
Q Consensus 707 --g~~G~lv~p~d~~~lA~ 723 (781)
++|||.|-. +.++..+
T Consensus 685 vG~eN~~~fG~-~~~ev~~ 702 (815)
T PRK14986 685 VGEENIFIFGN-TAEEVEA 702 (815)
T ss_pred cCCCcEEEeCC-CHHHHHH
Confidence 889999964 5555544
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0033 Score=72.10 Aligned_cols=183 Identities=12% Similarity=0.108 Sum_probs=126.1
Q ss_pred cccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC-
Q 003987 562 EHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD- 640 (781)
Q Consensus 562 ~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~- 640 (781)
...|+ +++..++++.++ ..|-...++.-+.++.+.-|+..|++-|+|++ .+....+++++++.|+.
T Consensus 422 ~~lgl--p~~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~---------~~~~~~l~~la~~~Gv~~ 488 (620)
T COG3914 422 AQLGL--PEDAVVFCCFNN--YFKITPEVFALWMQILSAVPNSVLLLKAGGDD---------AEINARLRDLAEREGVDS 488 (620)
T ss_pred hhcCC--CCCeEEEEecCC--cccCCHHHHHHHHHHHHhCCCcEEEEecCCCc---------HHHHHHHHHHHHHcCCCh
Confidence 45888 555555555554 45556666666666777789999999999865 24567899999999984
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-------Cccccccccc-cCCeEEE
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-------CHGGPAEIIE-HGASGFH 712 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT-------~~gG~~EiI~-dg~~G~l 712 (781)
.+++|.+ +.++++-...+. -+|+++=+--|-| +.|.+||+-+|+||++- +.|+. ++. -|..-++
T Consensus 489 eRL~f~p----~~~~~~h~a~~~-iADlvLDTyPY~g-~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~v 560 (620)
T COG3914 489 ERLRFLP----PAPNEDHRARYG-IADLVLDTYPYGG-HTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELV 560 (620)
T ss_pred hheeecC----CCCCHHHHHhhc-hhheeeecccCCC-ccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhh
Confidence 6999998 666777777777 4999887755544 67899999999999874 33332 222 2444444
Q ss_pred ECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003987 713 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 713 v~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
.+ +.++..++-..|- .|...+++.+..-.+.....==|+....++..|.++..
T Consensus 561 A~--s~~dYV~~av~~g----~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~ 613 (620)
T COG3914 561 AD--SRADYVEKAVAFG----SDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWG 613 (620)
T ss_pred cC--CHHHHHHHHHHhc----ccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHH
Confidence 44 6677766666654 78878888776555444332237666677767776654
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.1 Score=59.76 Aligned_cols=97 Identities=13% Similarity=0.160 Sum_probs=58.9
Q ss_pred HHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccccc
Q 003987 631 HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEH 706 (781)
Q Consensus 631 ~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~----gG~~EiI~d 706 (781)
+++.+.+.-..+++.+. +.....|+..+++. +|++|-.-+ -.++=|++.|+|+|+-.. -|..+-+
T Consensus 297 ~~l~~~~~~~~~~~vi~---~~~~~~e~~~iIs~-~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~l-- 365 (426)
T PRK10017 297 LNLRQHVSDPARYHVVM---DELNDLEMGKILGA-CELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQL-- 365 (426)
T ss_pred HHHHHhcccccceeEec---CCCChHHHHHHHhh-CCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHc--
Confidence 34444444344555543 12345688899995 998887643 367889999999999743 3444444
Q ss_pred CCeEEEECC--CCHHHHHHHHHHHHHhccCCHHHHHHH
Q 003987 707 GASGFHIDP--YHPDQAAELMADFFGKCKENPSHWKKI 742 (781)
Q Consensus 707 g~~G~lv~p--~d~~~lA~~I~~~l~~l~~dp~~~~~~ 742 (781)
|...++++. -+.+++.+++.+++ ++.+.+++.
T Consensus 366 g~~~~~~~~~~l~~~~Li~~v~~~~----~~r~~~~~~ 399 (426)
T PRK10017 366 GLPEMAIDIRHLLDGSLQAMVADTL----GQLPALNAR 399 (426)
T ss_pred CCccEEechhhCCHHHHHHHHHHHH----hCHHHHHHH
Confidence 223344443 35667888876666 666544443
|
|
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0052 Score=61.30 Aligned_cols=111 Identities=20% Similarity=0.261 Sum_probs=63.1
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc-CCcEEE----EecCCcccCCCCChhhHhhhhccccchhhhhHHH
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM-GITQCT----IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADL 469 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~-gvp~v~----t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~ 469 (781)
.++..+++. +..||||++|...|..+ .++.-. ++|++. ..|+-...-.-+... -...+...+...+.....
T Consensus 55 ~a~~~L~~~-Gf~PDvI~~H~GWGe~L--flkdv~P~a~li~Y~E~~y~~~g~d~~FDpe~-p~~~~~~~~~r~rN~~~l 130 (171)
T PF12000_consen 55 RAARQLRAQ-GFVPDVIIAHPGWGETL--FLKDVFPDAPLIGYFEFYYRASGADVGFDPEF-PPSLDDRARLRMRNAHNL 130 (171)
T ss_pred HHHHHHHHc-CCCCCEEEEcCCcchhh--hHHHhCCCCcEEEEEEEEecCCCCcCCCCCCC-CCCHHHHHHHHHHhHHHH
Confidence 444555554 67899999999887332 333334 677663 222211110000000 011122223333444566
Q ss_pred HHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCC
Q 003987 470 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY 533 (781)
Q Consensus 470 ~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f 533 (781)
..+..||..|+.|...+. +.|. .+.+|+.||+-|||++.+
T Consensus 131 ~~l~~~D~~isPT~wQ~~---------------~fP~---------~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 131 LALEQADAGISPTRWQRS---------------QFPA---------EFRSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHhCCcCcCCCHHHHH---------------hCCH---------HHHcCcEEeecccchhhc
Confidence 788999999999986644 1232 236799999999999765
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0092 Score=72.11 Aligned_cols=150 Identities=14% Similarity=0.088 Sum_probs=107.4
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHH-H---HHHHHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-L---VECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~-L---ieA~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
..|+..+++...++++-|+..+|.... + ++-+.+++... ....+++.|...+ .|..-...++.+..++
T Consensus 521 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 596 (797)
T cd04300 521 TTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAP----GYYMAKLIIKLINAVA 596 (797)
T ss_pred HhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 456666889999999999999999888 4 45566665431 1255655555433 3444555666666666
Q ss_pred HHc----CCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 635 KTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 635 ~el----gL~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
+.. .+.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..=+=+|.-|.++++|-.|...|+.++
T Consensus 597 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~ 671 (797)
T cd04300 597 DVVNNDPDVGDKLKVVFLP----NYNV-SLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEE 671 (797)
T ss_pred HHhccChhcCCceEEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHH
Confidence 632 2344 688886 3333 445555557999999875 89999999999999999999999999999987
Q ss_pred --CCeEEEECCCCHHHHH
Q 003987 707 --GASGFHIDPYHPDQAA 722 (781)
Q Consensus 707 --g~~G~lv~p~d~~~lA 722 (781)
++|+|+|-. +.++..
T Consensus 672 vG~eN~fiFG~-~~~ev~ 688 (797)
T cd04300 672 VGEENIFIFGL-TAEEVE 688 (797)
T ss_pred hCcCcEEEeCC-CHHHHH
Confidence 889999964 455544
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.46 Score=54.74 Aligned_cols=65 Identities=6% Similarity=0.037 Sum_probs=43.5
Q ss_pred HHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEECC-----CCHHHHHHHHHHHHHhccCCH-HHHHHHHHHHHH
Q 003987 680 LTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP-----YHPDQAAELMADFFGKCKENP-SHWKKISDGGLK 748 (781)
Q Consensus 680 ltvlEAMa~GlPVVaT----~~gG~~EiI~d-g~~G~lv~p-----~d~~~lA~~I~~~l~~l~~dp-~~~~~~s~~a~~ 748 (781)
++++||+++|+|+|+- +....+..+.+ -+.|..++. -+.++++++|.+++ .++ +..+++.+++.+
T Consensus 340 nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m----~~~~e~g~~~r~~~~~ 415 (442)
T PLN02208 340 GTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVM----DKDSDLGKLVRSNHTK 415 (442)
T ss_pred hHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHh----cCCchhHHHHHHHHHH
Confidence 5899999999999996 33344454443 466877753 26778888888776 554 344555555543
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.018 Score=63.33 Aligned_cols=109 Identities=12% Similarity=0.128 Sum_probs=82.2
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCC---CCC---CcHHHHHHHHcCCcEEEcCccccccccccCCeEEEEC
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF---YEA---FGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHID 714 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~---~E~---fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~ 714 (781)
+++..+|+.. +...+..++.. .++++.=++ .++ +.+-+.|+|+||.|.+++...+..-.+.+|+.=.+..
T Consensus 237 ~~~~yIg~~~---~~~~v~~~~~~-~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~ 312 (373)
T COG4641 237 PNVQYIGYYN---PKDGVPNAFKR-DDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQ 312 (373)
T ss_pred chhhhhhccC---ccchhhhcccc-cceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEec
Confidence 4566666322 22556666663 666655432 222 3778999999999999998888888888887655554
Q ss_pred CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 715 p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
|..++.+++..++ ..++.++++.+.|.+++...|+.+..
T Consensus 313 --d~kdl~~~~~yll----~h~~erkeiae~~ye~V~~~ht~~~r 351 (373)
T COG4641 313 --DSKDLKEKLKYLL----NHPDERKEIAECAYERVLARHTYEER 351 (373)
T ss_pred --CHHHHHHHHHHHh----cCcchHHHHHHhhHHHHHHhccHHHH
Confidence 8999999998777 88999999999999999999988654
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.31 Score=54.31 Aligned_cols=256 Identities=15% Similarity=0.207 Sum_probs=150.1
Q ss_pred CCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCH
Q 003987 405 QGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTY 483 (781)
Q Consensus 405 ~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~ 483 (781)
..+||+|..|.-.. .++++++|...++|++..-=++- ..+.+|.. .. .....-.-||.-++.|.
T Consensus 90 ~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlR-----t~~~~~PE--E~--------NR~l~~~~S~~hfapte 154 (383)
T COG0381 90 EEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLR-----TGDLYFPE--EI--------NRRLTSHLSDLHFAPTE 154 (383)
T ss_pred hhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEecccc-----cCCCCCcH--HH--------HHHHHHHhhhhhcCChH
Confidence 34999999887554 56668999999999876533321 01111110 00 01123334666677777
Q ss_pred HHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCC-cCCCCCCCcHHHHHHhhhhcchhhhccCcccccc
Q 003987 484 QEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (781)
Q Consensus 484 ~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGv-D~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (781)
...+.+. .-|++ ..++.|+-|-+ |.-.+.. .+ +.+ ......
T Consensus 155 ~ar~nLl--------------------~EG~~--~~~IfvtGnt~iDal~~~~-----~~-------~~~----~~~~~~ 196 (383)
T COG0381 155 IARKNLL--------------------REGVP--EKRIFVTGNTVIDALLNTR-----DR-------VLE----DSKILA 196 (383)
T ss_pred HHHHHHH--------------------HcCCC--ccceEEeCChHHHHHHHHH-----hh-------hcc----chhhHH
Confidence 6654221 12444 56788887743 2111100 00 000 000000
Q ss_pred ccCCCCCCC-CCEEEEEeeccCC-CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH-HHcCC
Q 003987 563 HVGTLSDRS-KPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM-KTYKL 639 (781)
Q Consensus 563 ~~g~l~~~~-k~iIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li-~elgL 639 (781)
.+ +.+.+ +.++++.=|-... +++..+++++.++.+.++++.++.--.-. ..+++.. +.++-
T Consensus 197 ~~--~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~--------------~~v~e~~~~~L~~ 260 (383)
T COG0381 197 KG--LDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPR--------------PRVRELVLKRLKN 260 (383)
T ss_pred hh--hccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCC--------------hhhhHHHHHHhCC
Confidence 00 11233 4455666555443 99999999999999888777665433322 2344444 55666
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCCeEEEECCCCH
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGASGFHIDPYHP 718 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~-~gG~~EiI~dg~~G~lv~p~d~ 718 (781)
.++|..+. ++...+...++.. | .+++.- .|-..=||-..|+||+.-+ .-.-+|.++.| +-.++. .|.
T Consensus 261 ~~~v~li~----pl~~~~f~~L~~~-a-~~iltD----SGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lvg-~~~ 328 (383)
T COG0381 261 VERVKLID----PLGYLDFHNLMKN-A-FLILTD----SGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILVG-TDE 328 (383)
T ss_pred CCcEEEeC----CcchHHHHHHHHh-c-eEEEec----CCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEeC-ccH
Confidence 66799987 7778888888885 5 333331 2666779999999999975 44566766443 444554 477
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHH
Q 003987 719 DQAAELMADFFGKCKENPSHWKKISDG 745 (781)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~~s~~ 745 (781)
+.+.+++..++ ++++..++|+..
T Consensus 329 ~~i~~~~~~ll----~~~~~~~~m~~~ 351 (383)
T COG0381 329 ENILDAATELL----EDEEFYERMSNA 351 (383)
T ss_pred HHHHHHHHHHh----hChHHHHHHhcc
Confidence 88888887776 888888877653
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.36 Score=56.26 Aligned_cols=78 Identities=10% Similarity=0.126 Sum_probs=46.0
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCc--EEEEcCCCCCCcHHHHHHHHcCCcEEEcC----cccccccccc-CCeEEE
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEH-GASGFH 712 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVVaT~----~gG~~EiI~d-g~~G~l 712 (781)
..+++..+ +++..++.. ..+ +||.=. | -++++||+++|+|+|+.. ..-.+..+.+ -..|+-
T Consensus 344 ~~g~~v~~----w~PQ~~iL~----h~~v~~fvtH~---G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~ 411 (482)
T PLN03007 344 GKGLIIRG----WAPQVLILD----HQATGGFVTHC---G-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVS 411 (482)
T ss_pred cCCEEEec----CCCHHHHhc----cCccceeeecC---c-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeE
Confidence 34677776 455555554 343 355532 2 358999999999999973 3333333221 123443
Q ss_pred EC----------CCCHHHHHHHHHHHH
Q 003987 713 ID----------PYHPDQAAELMADFF 729 (781)
Q Consensus 713 v~----------p~d~~~lA~~I~~~l 729 (781)
+. .-+.+++++++.+++
T Consensus 412 ~~~~~~~~~~~~~~~~~~l~~av~~~m 438 (482)
T PLN03007 412 VGAKKLVKVKGDFISREKVEKAVREVI 438 (482)
T ss_pred eccccccccccCcccHHHHHHHHHHHh
Confidence 31 136778888888776
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.46 Score=55.38 Aligned_cols=88 Identities=16% Similarity=0.127 Sum_probs=51.8
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----ccccc-cccccCCeEEEECC
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPA-EIIEHGASGFHIDP 715 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~----~gG~~-EiI~dg~~G~lv~p 715 (781)
+++.+.+ +++..++... . +.++||.= -| -.+++||+.+|+|+|+.. ....+ .+++.-+.|..++.
T Consensus 342 ~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH---~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~ 411 (481)
T PLN02554 342 DIGKVIG----WAPQVAVLAK-P-AIGGFVTH---CG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRK 411 (481)
T ss_pred cCceEEe----eCCHHHHhCC-c-ccCccccc---Cc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeec
Confidence 4555556 4555555431 1 24445543 12 348999999999999963 33344 34555456776631
Q ss_pred -------------CCHHHHHHHHHHHHHhccCCHHHHHH
Q 003987 716 -------------YHPDQAAELMADFFGKCKENPSHWKK 741 (781)
Q Consensus 716 -------------~d~~~lA~~I~~~l~~l~~dp~~~~~ 741 (781)
-+.++++++|.+++. .+++++++
T Consensus 412 ~~~~~~~~~~~~~~~~e~l~~av~~vm~---~~~~~r~~ 447 (481)
T PLN02554 412 YWRGDLLAGEMETVTAEEIERGIRCLME---QDSDVRKR 447 (481)
T ss_pred cccccccccccCeEcHHHHHHHHHHHhc---CCHHHHHH
Confidence 267788888877762 25555544
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.99 E-value=1.1 Score=51.77 Aligned_cols=92 Identities=13% Similarity=0.151 Sum_probs=57.2
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCc--EEEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-CeEEE
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFH 712 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~dg-~~G~l 712 (781)
.+++.+.+ +++-.++.. ... +||.= +=.++++||+++|+|+|+- +..-.+..+++. +.|.-
T Consensus 316 ~~~~~i~~----W~PQ~~iL~----H~~v~~FvtH----cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~ 383 (449)
T PLN02173 316 KDKSLVLK----WSPQLQVLS----NKAIGCFMTH----CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVR 383 (449)
T ss_pred CCceEEeC----CCCHHHHhC----CCccceEEec----CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEE
Confidence 35677777 555555554 333 55543 2246999999999999996 344455566553 56766
Q ss_pred ECCC------CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 003987 713 IDPY------HPDQAAELMADFFGKCKENPSHWKKISDGGLK 748 (781)
Q Consensus 713 v~p~------d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~ 748 (781)
+... +.+++++++.+++ .+++ .+++.+++.+
T Consensus 384 v~~~~~~~~~~~e~v~~av~~vm----~~~~-~~~~r~~a~~ 420 (449)
T PLN02173 384 VKAEKESGIAKREEIEFSIKEVM----EGEK-SKEMKENAGK 420 (449)
T ss_pred EeecccCCcccHHHHHHHHHHHh----cCCh-HHHHHHHHHH
Confidence 6421 5788999998877 4543 2444444433
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.98 Score=52.17 Aligned_cols=140 Identities=12% Similarity=0.094 Sum_probs=80.7
Q ss_pred CCCEEEEEeecc---CCCChHHHHHHHHHhhccCCCeEEEE-EeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003987 571 SKPIVFSMARLD---HVKNMTGLVECYGKNSQLRELVNLVV-VAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 571 ~k~iIl~vGRL~---~~Kgl~~LieA~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~fl 646 (781)
+..++++.|.+. ..+-+..++.+++++.. ++++ +..+.. + ...+... ++ +.+++...
T Consensus 273 ~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~-----~fiW~~~~~~~-------~--~l~~~~~---~~--~~~~~~v~ 333 (448)
T PLN02562 273 NSVIYISFGSWVSPIGESNVRTLALALEASGR-----PFIWVLNPVWR-------E--GLPPGYV---ER--VSKQGKVV 333 (448)
T ss_pred CceEEEEecccccCCCHHHHHHHHHHHHHCCC-----CEEEEEcCCch-------h--hCCHHHH---HH--hccCEEEE
Confidence 345778888864 34455666666665532 4443 432111 0 0000111 11 23567777
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEECCCCHHHH
Q 003987 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDPYHPDQA 721 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~d-g~~G~lv~p~d~~~l 721 (781)
+ +++..++... . +.++||.= -| -.+++||+.+|+|+|+. |....+..+.+ -+.|+-+..-+.+++
T Consensus 334 ~----w~PQ~~iL~h-~-~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l 403 (448)
T PLN02562 334 S----WAPQLEVLKH-Q-AVGCYLTH---CG-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEV 403 (448)
T ss_pred e----cCCHHHHhCC-C-ccceEEec---Cc-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHH
Confidence 6 5566666552 1 13345543 12 35899999999999986 44455555554 356777755678899
Q ss_pred HHHHHHHHHhccCCHHHHHHHH
Q 003987 722 AELMADFFGKCKENPSHWKKIS 743 (781)
Q Consensus 722 A~~I~~~l~~l~~dp~~~~~~s 743 (781)
+++|.+++ .+++++++..
T Consensus 404 ~~~v~~~l----~~~~~r~~a~ 421 (448)
T PLN02562 404 EEGLRKVM----EDSGMGERLM 421 (448)
T ss_pred HHHHHHHh----CCHHHHHHHH
Confidence 99998877 6776655433
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.029 Score=67.14 Aligned_cols=144 Identities=16% Similarity=0.132 Sum_probs=109.5
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHH----HHHHHhh-ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLV----ECYGKNS-QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY 637 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~Li----eA~~~l~-~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el 637 (781)
+.|+..+++...++++-|+.++|.....+ ..+..++ ...|.+.+++.|...+ .|..-.+.++.+...++..
T Consensus 478 ~~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP----~y~~aK~iIk~I~~~a~~i 553 (750)
T COG0058 478 RTGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHP----ADYAAKEIIKLINDVADVI 553 (750)
T ss_pred hcCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCC----cchHHHHHHHHHHHHHHhh
Confidence 34555578899999999999999887654 3444444 3345566666665543 4556667778888888887
Q ss_pred CCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc--cCCeEEEE
Q 003987 638 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGASGFHI 713 (781)
Q Consensus 638 gL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~--dg~~G~lv 713 (781)
+...+|.|+. ..+. .+.+.+-.++||=.+-|. .|+.|..-+=||.-|.++|+|-.|...|+.+ ++.|||+|
T Consensus 554 n~~lkVvFl~----nYdv-slA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~f 628 (750)
T COG0058 554 NNKLKVVFLP----NYDV-SLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIF 628 (750)
T ss_pred cccceEEEeC----CCCh-hHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEe
Confidence 7667899996 3333 455555557999988775 7999999999999999999999999999997 89999999
Q ss_pred CC
Q 003987 714 DP 715 (781)
Q Consensus 714 ~p 715 (781)
-.
T Consensus 629 G~ 630 (750)
T COG0058 629 GE 630 (750)
T ss_pred CC
Confidence 54
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=96.77 E-value=1.1 Score=52.16 Aligned_cols=87 Identities=15% Similarity=0.098 Sum_probs=52.2
Q ss_pred HHHHHHHHcCCcEEEc----CccccccccccCCeEEEECC------CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 003987 680 LTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDP------YHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749 (781)
Q Consensus 680 ltvlEAMa~GlPVVaT----~~gG~~EiI~dg~~G~lv~p------~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~ 749 (781)
++++||+++|+|+|+. +....+..++.-+.|..++. -+.++++++|.+++ .+++ -.++.+++++.
T Consensus 368 nS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm----~~~~-g~~~r~~a~~l 442 (472)
T PLN02670 368 NSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRLAM----VDDA-GEEIRDKAKEM 442 (472)
T ss_pred chHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHHHHh----cCcc-hHHHHHHHHHH
Confidence 5899999999999997 44445555666678888753 25788888888777 5541 12344444443
Q ss_pred HHHhcCcch-hhhccchHHHHHh
Q 003987 750 IYERLVVSS-DGIVDPSPFVINV 771 (781)
Q Consensus 750 ~~~~ysw~~-~~il~~ye~ll~~ 771 (781)
...--+-.. ..+++..++.+..
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 443 RNLFGDMDRNNRYVDELVHYLRE 465 (472)
T ss_pred HHHHhCcchhHHHHHHHHHHHHH
Confidence 322112111 1455555555543
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.35 Score=52.45 Aligned_cols=171 Identities=9% Similarity=0.042 Sum_probs=113.4
Q ss_pred CCEEEEEee-ccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003987 572 KPIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 572 k~iIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~ 650 (781)
.++.+-+|+ =|+..++..+++++.+... .++++++.=+.|. ...++++++.+..+++--.++++.+.
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~--~~v~ii~PlsYp~-------gn~~Yi~~V~~~~~~lF~~~~~~~L~--- 212 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFG--DNVKIIVPMGYPA-------NNQAYIEEVRQAGLALFGAENFQILT--- 212 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhC--CCeEEEEECCcCC-------CCHHHHHHHHHHHHHhcCcccEEehh---
Confidence 345555666 4567788888888877643 5788877665543 12478888999998887657898887
Q ss_pred CcCChHHHHHHHHccCcEEEEcC-CCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeEEEECCCCHHHHHHHHHHH
Q 003987 651 NRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQAAELMADF 728 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVVaT-~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~ 728 (781)
+.++-+|...+++. +|+.++-- +.+|+|.. +=.+..|+||+.+ +..-..++.+.|..- +++.++ +-..+.
T Consensus 213 e~l~f~eYl~lL~~-~Dl~~f~~~RQQgiGnl-~lLi~~G~~v~l~r~n~fwqdl~e~gv~V-lf~~d~---L~~~~v-- 284 (322)
T PRK02797 213 EKLPFDDYLALLRQ-CDLGYFIFARQQGIGTL-CLLIQLGKPVVLSRDNPFWQDLTEQGLPV-LFTGDD---LDEDIV-- 284 (322)
T ss_pred hhCCHHHHHHHHHh-CCEEEEeechhhHHhHH-HHHHHCCCcEEEecCCchHHHHHhCCCeE-EecCCc---ccHHHH--
Confidence 47788999999995 99888764 67888854 4578999999998 566666666555433 343322 222211
Q ss_pred HHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhcC
Q 003987 729 FGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVIS 773 (781)
Q Consensus 729 l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~~ 773 (781)
.+..+++....++.+. |+- ...++.|.+++..-+
T Consensus 285 -------~e~~rql~~~dk~~I~--Ff~--pn~~~~W~~~l~~~~ 318 (322)
T PRK02797 285 -------REAQRQLASVDKNIIA--FFS--PNYLQGWRNALAIAA 318 (322)
T ss_pred -------HHHHHHHHhhCcceee--ecC--HhHHHHHHHHHHHhh
Confidence 1223344444555553 544 567788888886543
|
|
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.014 Score=51.27 Aligned_cols=71 Identities=17% Similarity=0.076 Sum_probs=50.4
Q ss_pred CCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCc--hHHHHHHHHHcCCcEEEEe
Q 003987 360 EHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG--NLVASLLAYKMGITQCTIA 437 (781)
Q Consensus 360 ~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~--~lva~llar~~gvp~v~t~ 437 (781)
.+.+++.+|+... -.....|.+-....-+...+.+ ++.||||+|.+.+ .--+.+.|+.+|++.|+|-
T Consensus 14 ngLKVYYlP~~~~--------~~~~t~Pt~~~~~pl~R~Ilir---E~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTD 82 (90)
T PF08288_consen 14 NGLKVYYLPLKVF--------YNQCTLPTLFGSFPLLRNILIR---ERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTD 82 (90)
T ss_pred CCeEEEeecchhh--------hcCcchHHHHHhhHHHHHHHHH---cCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeec
Confidence 4789999998863 2334455443333333333333 4899999999876 4568889999999999999
Q ss_pred cCCc
Q 003987 438 HALE 441 (781)
Q Consensus 438 H~l~ 441 (781)
|++.
T Consensus 83 HSLf 86 (90)
T PF08288_consen 83 HSLF 86 (90)
T ss_pred cccc
Confidence 9874
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.74 Score=50.64 Aligned_cols=133 Identities=15% Similarity=0.187 Sum_probs=75.6
Q ss_pred CCCEEEEEeeccCCCChHH---HHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003987 571 SKPIVFSMARLDHVKNMTG---LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl~~---LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG 647 (781)
+..+++++|. -.-|-+. .++|+..+....+ .-++|.|..-. .+..+++.....-.++|..+-
T Consensus 219 ~~~Ilvs~GG--G~dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP------------~~~r~~l~~~A~~~p~i~I~~ 283 (400)
T COG4671 219 GFDILVSVGG--GADGAELIETALAAAQLLAGLNH-KWLIVTGPFMP------------EAQRQKLLASAPKRPHISIFE 283 (400)
T ss_pred cceEEEecCC--ChhhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCC------------HHHHHHHHHhcccCCCeEEEE
Confidence 4556777774 2233332 2333333333222 23566666654 334444444444457888887
Q ss_pred cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccc--ccc------cCCeEEEEC-CCCH
Q 003987 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE--IIE------HGASGFHID-PYHP 718 (781)
Q Consensus 648 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~E--iI~------dg~~G~lv~-p~d~ 718 (781)
+.. ++..+++. |+..|.=+-| +|+.|-+++|+|.+.-..+-+.| .|. -|-..++.+ .-.+
T Consensus 284 f~~------~~~~ll~g-A~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~ 352 (400)
T COG4671 284 FRN------DFESLLAG-ARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTP 352 (400)
T ss_pred hhh------hHHHHHHh-hheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCCh
Confidence 544 57788885 8887765432 68999999999998875444333 221 133333332 2257
Q ss_pred HHHHHHHHHHH
Q 003987 719 DQAAELMADFF 729 (781)
Q Consensus 719 ~~lA~~I~~~l 729 (781)
+.+|++|...+
T Consensus 353 ~~La~al~~~l 363 (400)
T COG4671 353 QNLADALKAAL 363 (400)
T ss_pred HHHHHHHHhcc
Confidence 77888886655
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.12 Score=54.92 Aligned_cols=140 Identities=19% Similarity=0.271 Sum_probs=81.2
Q ss_pred CCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003987 571 SKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~ 650 (781)
.+.+++++|.=|+ ||++. +.++.+.+. ++++.||-+...| ....+++.++++ +++.++-
T Consensus 158 ~r~ilI~lGGsDp-k~lt~--kvl~~L~~~--~~nl~iV~gs~~p----------~l~~l~k~~~~~---~~i~~~~--- 216 (318)
T COG3980 158 KRDILITLGGSDP-KNLTL--KVLAELEQK--NVNLHIVVGSSNP----------TLKNLRKRAEKY---PNINLYI--- 216 (318)
T ss_pred hheEEEEccCCCh-hhhHH--HHHHHhhcc--CeeEEEEecCCCc----------chhHHHHHHhhC---CCeeeEe---
Confidence 3447788886554 66654 333334332 3676655443221 144555555554 7788875
Q ss_pred CcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc--EEE--cCcccccccccc----CCeEEEECCCCHHHHH
Q 003987 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP--TFA--TCHGGPAEIIEH----GASGFHIDPYHPDQAA 722 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP--VVa--T~~gG~~EiI~d----g~~G~lv~p~d~~~lA 722 (781)
...++.+++.+ +|+.+..+ |.|+.||...|+| |++ .+.-..+.-.+. -..|++. ...+..
T Consensus 217 ---~~~dma~LMke-~d~aI~Aa-----GstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~lg~~~~l~~~l---~~~~~~ 284 (318)
T COG3980 217 ---DTNDMAELMKE-ADLAISAA-----GSTLYEALLLGVPSLVLPLAENQIATAKEFEALGIIKQLGYHL---KDLAKD 284 (318)
T ss_pred ---cchhHHHHHHh-cchheecc-----chHHHHHHHhcCCceEEeeeccHHHHHHHHHhcCchhhccCCC---chHHHH
Confidence 24568888886 88777653 8999999999999 332 332222222211 2345553 234455
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHH
Q 003987 723 ELMADFFGKCKENPSHWKKISDGGL 747 (781)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~~s~~a~ 747 (781)
..+.++. .|+..+..++..+.
T Consensus 285 ~~~~~i~----~d~~~rk~l~~~~~ 305 (318)
T COG3980 285 YEILQIQ----KDYARRKNLSFGSK 305 (318)
T ss_pred HHHHHhh----hCHHHhhhhhhccc
Confidence 5554444 78888877766543
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.26 E-value=3.2 Score=47.97 Aligned_cols=92 Identities=12% Similarity=0.166 Sum_probs=57.0
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-CeEEEEC-
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID- 714 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~dg-~~G~lv~- 714 (781)
++....+ +++..++... . +.++||.=. | -++++||+++|+|+|+. |....+..+.+. +.|+-+.
T Consensus 324 ~~g~v~~----w~PQ~~iL~h-~-~v~~fvtH~---G-~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~ 393 (451)
T PLN02410 324 GRGYIVK----WAPQKEVLSH-P-AVGGFWSHC---G-WNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEG 393 (451)
T ss_pred CCeEEEc----cCCHHHHhCC-C-ccCeeeecC---c-hhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCC
Confidence 5566666 5666666552 1 134466542 2 24899999999999996 444455555444 5777762
Q ss_pred CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Q 003987 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGL 747 (781)
Q Consensus 715 p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~ 747 (781)
.-+.++++++|.+++ .+++ .+++.++++
T Consensus 394 ~~~~~~v~~av~~lm----~~~~-~~~~r~~a~ 421 (451)
T PLN02410 394 DLDRGAVERAVKRLM----VEEE-GEEMRKRAI 421 (451)
T ss_pred cccHHHHHHHHHHHH----cCCc-HHHHHHHHH
Confidence 347788999998877 5543 334444443
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=96.25 E-value=3.3 Score=47.95 Aligned_cols=70 Identities=11% Similarity=0.204 Sum_probs=45.9
Q ss_pred cCChHHHHHHHHccCc--EEEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEECC------CCH
Q 003987 652 RARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP------YHP 718 (781)
Q Consensus 652 ~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~d-g~~G~lv~p------~d~ 718 (781)
+++..++.. .+. +||.=. |+ .+++||+++|+|+|+- +..-.+..+.+ -+.|..+.. -+.
T Consensus 331 w~PQ~~iL~----h~~vg~FitH~---G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 331 WSPQEKILS----HMAISCFVTHC---GW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred cCCHHHHhc----CcCcCeEEeeC---Cc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 455555554 243 565532 22 4899999999999996 34444555554 467877742 367
Q ss_pred HHHHHHHHHHH
Q 003987 719 DQAAELMADFF 729 (781)
Q Consensus 719 ~~lA~~I~~~l 729 (781)
+++++++.+++
T Consensus 403 ~~l~~av~~~m 413 (456)
T PLN02210 403 EEVERCIEAVT 413 (456)
T ss_pred HHHHHHHHHHh
Confidence 88889988776
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.45 Score=52.31 Aligned_cols=121 Identities=12% Similarity=0.058 Sum_probs=85.9
Q ss_pred CCEEEEEee-ccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003987 572 KPIVFSMAR-LDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 572 k~iIl~vGR-L~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~ 650 (781)
++.-+-+|+ =++..++-.+++++.+.. ..++++++-=+.+. ...++++++.+.++++--.+++..+.
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~--~~~~kIivPLsYg~-------~n~~Yi~~V~~~~~~lF~~~~~~iL~--- 251 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQF--GDDVKIIVPLSYGA-------NNQAYIQQVIQAGKELFGAENFQILT--- 251 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhc--CCCeEEEEECCCCC-------chHHHHHHHHHHHHHhcCccceeEhh---
Confidence 344445665 456777888888777643 35677766544432 12468888888888886567788775
Q ss_pred CcCChHHHHHHHHccCcEEEEcC-CCCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 651 NRARNGELYRYIADTKGAFVQPA-FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS-~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
+.++-+|..++++. +|+.++.. +..|.|. ++=.+.+|+||+.+.....-....+
T Consensus 252 e~mpf~eYl~lL~~-cDl~if~~~RQQgiGn-I~lLl~~G~~v~L~~~np~~~~l~~ 306 (360)
T PF07429_consen 252 EFMPFDEYLALLSR-CDLGIFNHNRQQGIGN-ICLLLQLGKKVFLSRDNPFWQDLKE 306 (360)
T ss_pred hhCCHHHHHHHHHh-CCEEEEeechhhhHhH-HHHHHHcCCeEEEecCChHHHHHHh
Confidence 47889999999995 99999987 5788885 5558999999999965554444433
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.23 Score=60.10 Aligned_cols=292 Identities=14% Similarity=0.089 Sum_probs=166.9
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHH
Q 003987 394 EDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM 472 (781)
Q Consensus 394 ~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~-~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~ 472 (781)
......+.+.++ .-|+|-.|.....++.-.+..+ ..+.+-+..|+..+. +.++. -......-...+
T Consensus 128 ~~f~d~ive~~~-~~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfps----sEi~r--------~lp~r~eIl~gl 194 (732)
T KOG1050|consen 128 QAFADKIVEVYE-EGDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPS----SEIYR--------CLPVRKEILRGL 194 (732)
T ss_pred HHHHHHHHHhcc-CCCcEEEEcchhhccchhhhcccccceEEEeccCCCCh----HHHHH--------hcccHHHHHHhh
Confidence 334445555555 6788888887765555444444 456666777764432 11111 111111122345
Q ss_pred hhCCEEEecCHHHHhhccccc-----cccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhh
Q 003987 473 NNADFIITSTYQEIAGTKNTV-----GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALH 547 (781)
Q Consensus 473 ~~AD~IIt~S~~~~~~~k~~v-----~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~ 547 (781)
..+|.|=..+++.+.....+- -.+.+ .|...+ +.|.. ....+.++|-|+|...|............
T Consensus 195 l~~~~i~f~t~d~arhFls~c~R~l~~~~~s--~~~~~~----v~~rg-r~~~v~~~pigid~~r~v~~~~~~~~~~~-- 265 (732)
T KOG1050|consen 195 LYDDLLGFHTDDYARHFLSTCSRLLGLEVAS--KFPTAG----VSGRG-RDVSVKALPIGIDVQRFVKLLELPYVGSK-- 265 (732)
T ss_pred hccCccccccccHHHHHHHHHHHHHHhhhhc--cCCcce----EEecc-ceeeeeecccccchHHhhccccchhHHHH--
Confidence 555555444433222111000 00110 000111 11111 13356668888888766543221110000
Q ss_pred cchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHH
Q 003987 548 GSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 548 ~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee 623 (781)
. ..+.-+ ..++.+|+-+-|++..||+..=+.++.++...+| .+.++.+..+... ...+.
T Consensus 266 --~-----------~ei~~~-~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~---~~~~v 328 (732)
T KOG1050|consen 266 --G-----------MEIKEP-FKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRT---DGKEV 328 (732)
T ss_pred --H-----------HHHhhh-ccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcc---cchHH
Confidence 0 001111 2467889999999999999988888888766544 5677777766542 22222
Q ss_pred HHHHHHHHHHHHH----cCC--CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcC----CcEE
Q 003987 624 IAEIEKMHELMKT----YKL--DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG----LPTF 693 (781)
Q Consensus 624 ~~~~~~l~~li~e----lgL--~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~G----lPVV 693 (781)
......+...+.+ .+- ...|+++- ..++..++.++++ .+|+.+..++.+|..++.+|+.+|. .+.|
T Consensus 329 ~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~---~~~~~~~l~a~~~-Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lV 404 (732)
T KOG1050|consen 329 EELKFCVSVHVRRINEKFGSASYQPVHSLL---KDLPFLELLALYK-VAEVCPVTSWRDGMNLVFLEYILCQENKKSVLV 404 (732)
T ss_pred HHHHHHhHhhhhhhhhccCCcccceEEEee---ccCCHHHHhhhHH-hhhheeecccccccchhhhHHHHhhcccCCceE
Confidence 2222333333322 221 12344433 3677889999999 5999999999999999999999984 7888
Q ss_pred EcCccccccccccCCeEEEECCCCHHHHHHHHHHHHH
Q 003987 694 ATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 730 (781)
Q Consensus 694 aT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~ 730 (781)
.+.+-|..+..+++ ..+++|.|.++++..|..++.
T Consensus 405 lsef~G~~~tl~d~--aivvnpw~~~~~~~~i~~al~ 439 (732)
T KOG1050|consen 405 LSEFIGDDTTLEDA--AIVVNPWDGDEFAILISKALT 439 (732)
T ss_pred Eeeecccccccccc--CEEECCcchHHHHHHHHHHhh
Confidence 88888888887543 678899999999999988874
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.015 Score=69.94 Aligned_cols=151 Identities=14% Similarity=0.050 Sum_probs=107.0
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHH-HHHH---HHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-LVEC---YGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~-LieA---~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
+.|+..+++...++++-|+..+|.... ++.. +.++++.- ....+++.|...+ .|..-...++.+.+++
T Consensus 520 ~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 595 (798)
T PRK14985 520 RTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVA 595 (798)
T ss_pred HhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCC----CcHHHHHHHHHHHHHH
Confidence 346666888888999999999999888 5444 44554320 1256766665543 3445555666666666
Q ss_pred HHcC----CCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 635 KTYK----LDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 635 ~elg----L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
+..+ +.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..=+=+|.-|.++++|-.|...|+.++
T Consensus 596 ~~in~Dp~v~~~lkVVFle----nY~V-slAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~ 670 (798)
T PRK14985 596 EVINNDPLVGDKLKVVFLP----DYCV-SAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQ 670 (798)
T ss_pred HHhcCChhhCCceeEEEeC----CCCh-HHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHH
Confidence 5442 234 688886 3333 445555557999999875 89999999999999999999999999999876
Q ss_pred --CCeEEEECCCCHHHHHH
Q 003987 707 --GASGFHIDPYHPDQAAE 723 (781)
Q Consensus 707 --g~~G~lv~p~d~~~lA~ 723 (781)
++|||.|-. +.++..+
T Consensus 671 vG~eN~f~fG~-~~~ev~~ 688 (798)
T PRK14985 671 VGEENIFIFGH-TVEQVKA 688 (798)
T ss_pred hCcCcEEEeCC-CHHHHHH
Confidence 789999965 4554433
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.032 Score=67.37 Aligned_cols=151 Identities=15% Similarity=0.100 Sum_probs=106.8
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHH-HH---HHHHHhhccC----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTG-LV---ECYGKNSQLR----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~-Li---eA~~~l~~~~----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
+.|+..+++...++++-|+..+|.... ++ +.+.+++..- ....+++.|...+ .|..-...++.+.+++
T Consensus 518 ~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP----~y~~aK~iIklI~~va 593 (794)
T TIGR02093 518 HTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAP----GYHMAKLIIKLINSVA 593 (794)
T ss_pred hcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCC----CcHHHHHHHHHHHHHH
Confidence 456666888888999999999999888 44 4455554321 1346666665443 2444455566666666
Q ss_pred HHcC----CCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 635 KTYK----LDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 635 ~elg----L~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
+..+ +.+ +|.|+. .... .+.+.+-.++|+-.+-|. .|+.|..=+=+|.-|.++++|-.|...|+.++
T Consensus 594 ~~iN~Dp~v~~~lkVVFle----nY~V-slAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~ 668 (794)
T TIGR02093 594 EVVNNDPAVGDKLKVVFVP----NYNV-SLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREE 668 (794)
T ss_pred HHhccChhhCCceeEEEeC----CCCh-HHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHH
Confidence 4422 334 688886 3333 445555447999999875 89999999999999999999999999999987
Q ss_pred --CCeEEEECCCCHHHHHH
Q 003987 707 --GASGFHIDPYHPDQAAE 723 (781)
Q Consensus 707 --g~~G~lv~p~d~~~lA~ 723 (781)
++|+|+|-. +.++..+
T Consensus 669 vG~eN~fiFG~-~~~ev~~ 686 (794)
T TIGR02093 669 VGAENIFIFGL-TVEEVEA 686 (794)
T ss_pred hCcccEEEcCC-CHHHHHH
Confidence 889999964 5555443
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.03 E-value=4.1 Score=47.06 Aligned_cols=89 Identities=6% Similarity=0.000 Sum_probs=55.6
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Cccccccccc-cCCeEEEECC-----CCHHHH
Q 003987 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIE-HGASGFHIDP-----YHPDQA 721 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~-dg~~G~lv~p-----~d~~~l 721 (781)
+++-.++... . +.++||.=. =-++++||+++|+|+|+. +..-.+..+. .-+.|..+.. -+.+++
T Consensus 319 w~PQ~~vL~h-~-~v~~fvtH~----G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i 392 (446)
T PLN00414 319 WVEQPLILSH-P-SVGCFVNHC----GFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESL 392 (446)
T ss_pred cCCHHHHhcC-C-ccceEEecC----chhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHH
Confidence 4555555542 1 125566542 246899999999999997 3334455553 4567877742 377888
Q ss_pred HHHHHHHHHhccCCH-HHHHHHHHHHHHHH
Q 003987 722 AELMADFFGKCKENP-SHWKKISDGGLKRI 750 (781)
Q Consensus 722 A~~I~~~l~~l~~dp-~~~~~~s~~a~~~~ 750 (781)
++++.+++ .++ +..+++.+++++.-
T Consensus 393 ~~~v~~~m----~~~~e~g~~~r~~a~~~~ 418 (446)
T PLN00414 393 RDTVKSVM----DKDSEIGNLVKRNHKKLK 418 (446)
T ss_pred HHHHHHHh----cCChhhHHHHHHHHHHHH
Confidence 88888776 443 45556666655443
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=95.73 E-value=5.7 Score=46.32 Aligned_cols=79 Identities=15% Similarity=0.130 Sum_probs=48.8
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEECC
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHIDP 715 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~d-g~~G~lv~p 715 (781)
.++++.+ +++..++... .+.++||.=. | -.+++||+++|+|+|+- +..-.+..+.+ -+.|.-+..
T Consensus 343 ~g~~v~~----w~PQ~~vL~h--~~v~~fvtH~---G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~ 412 (477)
T PLN02863 343 RGLVIRG----WAPQVAILSH--RAVGAFLTHC---G-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCE 412 (477)
T ss_pred CCEEecC----CCCHHHHhcC--CCcCeEEecC---C-chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEecc
Confidence 4567666 4555555441 1245666542 2 35899999999999996 34444444433 367776632
Q ss_pred -----CCHHHHHHHHHHHH
Q 003987 716 -----YHPDQAAELMADFF 729 (781)
Q Consensus 716 -----~d~~~lA~~I~~~l 729 (781)
-+.+++++++.+++
T Consensus 413 ~~~~~~~~~~v~~~v~~~m 431 (477)
T PLN02863 413 GADTVPDSDELARVFMESV 431 (477)
T ss_pred CCCCCcCHHHHHHHHHHHh
Confidence 25678888887765
|
|
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.18 Score=56.09 Aligned_cols=91 Identities=16% Similarity=0.104 Sum_probs=57.1
Q ss_pred CEEEEEeecc-C-CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003987 573 PIVFSMARLD-H-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 573 ~iIl~vGRL~-~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~ 650 (781)
.+.+..|+-. + .+.+..+++++.++.+.. ..+++.|.. . .+.+++...+. ..+.+.+
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~--~~~~i~~a~-~------------~~~i~~~~~~~---~~~~~~~--- 227 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKE--KILVVPSFF-K------------GKDLKEIYGDI---SEFEISY--- 227 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcC--cEEEEeCCC-c------------HHHHHHHHhcC---CCcEEec---
Confidence 3445555432 2 355667778988887643 567776553 2 13344433332 2344543
Q ss_pred CcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 003987 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~ 696 (781)
+.+.+++ +||+.+..| |.+.+|++.+|+|.|..-
T Consensus 228 ------~~~~~m~-~aDlal~~S-----GT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 228 ------DTHKALL-EAEFAFICS-----GTATLEAALIGTPFVLAY 261 (347)
T ss_pred ------cHHHHHH-hhhHHHhcC-----cHHHHHHHHhCCCEEEEE
Confidence 2356777 499888876 888889999999999863
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.95 Score=49.71 Aligned_cols=109 Identities=16% Similarity=0.113 Sum_probs=65.5
Q ss_pred CCCCEEEEEeeccCCCCh-----HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE-
Q 003987 570 RSKPIVFSMARLDHVKNM-----TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF- 643 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl-----~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V- 643 (781)
+.+.+.+.+|.=...-.+ ..+++.+..+.+... ..++|..+-..| .+..+.|.+.. +-.+.+
T Consensus 145 ~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp--------~~~~~~L~~~~---~~~~~~~ 212 (311)
T PF06258_consen 145 PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTP--------PEAEAALRELL---KDNPGVY 212 (311)
T ss_pred CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCc--------HHHHHHHHHhh---cCCCceE
Confidence 344556677753332222 245666666655544 788888887653 12233333333 334567
Q ss_pred EEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc
Q 003987 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG 699 (781)
Q Consensus 644 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG 699 (781)
.|-+ . +..-+..+|+. +|.++.+.- .-.-+.||.++|+||..-...+
T Consensus 213 ~~~~--~---~~nPy~~~La~-ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 213 IWDG--T---GENPYLGFLAA-ADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred EecC--C---CCCcHHHHHHh-CCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 5532 1 22346778884 999999853 2234789999999999987665
|
The function of this family is unknown. |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.49 E-value=2.4 Score=45.00 Aligned_cols=112 Identities=10% Similarity=0.035 Sum_probs=65.7
Q ss_pred CCCCCEEEEEeeccCCCCh-----HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHH-cCCCCc
Q 003987 569 DRSKPIVFSMARLDHVKNM-----TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKT-YKLDGQ 642 (781)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgl-----~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~e-lgL~~~ 642 (781)
.+..++-+.+|.-.+.-.+ ..++.++-+..+. ....+++--+-.. .+..+..++. +.-..-
T Consensus 159 ~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~-~g~~~lisfSRRT------------p~~~~s~l~~~l~s~~~ 225 (329)
T COG3660 159 LPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILEN-QGGSFLISFSRRT------------PDTVKSILKNNLNSSPG 225 (329)
T ss_pred CCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHh-CCceEEEEeecCC------------cHHHHHHHHhccccCce
Confidence 3556677788865554443 2233333332221 3467777766554 2355566655 444456
Q ss_pred EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccc
Q 003987 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGP 700 (781)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~ 700 (781)
+.|-+.-++.- -...+++ ++|.++...-.- .-.-||.+.|+||++-.-.+.
T Consensus 226 i~w~~~d~g~N---PY~~~La-~Adyii~TaDSi---nM~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 226 IVWNNEDTGYN---PYIDMLA-AADYIISTADSI---NMCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred eEeCCCCCCCC---chHHHHh-hcceEEEecchh---hhhHHHhccCCCeEEEecCCc
Confidence 77776422222 3466777 599999986522 235799999999998754443
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.33 E-value=7.7 Score=45.26 Aligned_cols=95 Identities=13% Similarity=0.146 Sum_probs=57.6
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccC-CeEEEEC
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHG-ASGFHID 714 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~dg-~~G~lv~ 714 (781)
.+++.+.+ +++..++... . +.++||.=. | -.+++||+.+|+|+|+. +.......+.+. +.|+-+.
T Consensus 336 ~~~g~v~~----W~PQ~~iL~H-~-~v~~FvtH~---G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 336 GDKGKIVQ----WCPQEKVLAH-P-SVACFVTHC---G-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CCceEEEe----cCCHHHHhCC-C-ccCeEEecC---C-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 45666666 5555555532 1 355666542 2 35899999999999997 344445555554 6777762
Q ss_pred -----C--CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 003987 715 -----P--YHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749 (781)
Q Consensus 715 -----p--~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~ 749 (781)
. -+.++++++|.+++ .+++ .++|.+++++.
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm----~~~~-g~~~r~ra~~l 442 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT----VGEK-AAELKQNALKW 442 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh----cCch-HHHHHHHHHHH
Confidence 1 25778888887776 4432 34455544443
|
|
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=95.19 E-value=3.4 Score=44.15 Aligned_cols=146 Identities=15% Similarity=0.055 Sum_probs=81.7
Q ss_pred CCCCCEE---EEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHH----------HHH
Q 003987 569 DRSKPIV---FSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHE----------LMK 635 (781)
Q Consensus 569 ~~~k~iI---l~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~----------li~ 635 (781)
+.++... .|+||....||...+++..++..+. +...-++-|-...+ +.+.-+.. .++
T Consensus 177 d~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~---------A~~~i~d~~~~~~y~~~~~~~ 246 (355)
T PF11440_consen 177 DVSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSP---------AKISIKDHGIPYEYYPKLDCD 246 (355)
T ss_dssp -GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SST---------HHHHHHHTT--EEEE-CTGGG
T ss_pred hhHhhhcccceeeeeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCC---------ceeeeecCCcccccCcccccc
Confidence 3344444 7999999999999999998886654 56777777754431 11111100 011
Q ss_pred HcCC--CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC------CCCCcHHHHHHHHcCC-cEEEcCcccccc----
Q 003987 636 TYKL--DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF------YEAFGLTVVEAMTCGL-PTFATCHGGPAE---- 702 (781)
Q Consensus 636 elgL--~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~------~E~fGltvlEAMa~Gl-PVVaT~~gG~~E---- 702 (781)
+..+ ..-+..+| +.-++|....++. +...++-+. .+..-.+-+|..|||+ ||+-+..|....
T Consensus 247 ~~~~~pN~~~~v~~----~Yi~~E~~~~Mak-s~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D 321 (355)
T PF11440_consen 247 EPKPAPNSPVPVYG----PYIRSEGLERMAK-SLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLD 321 (355)
T ss_dssp G---SSS--EEEES----S--HHHHHHHHHT-EEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTT
T ss_pred CcccCCCCcceecc----hhhhHHHHHHHhh-ccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeec
Confidence 1112 12366676 6667899999996 655555442 3557789999999995 777775554333
Q ss_pred ---ccccCCeEEEECCCCHHHHHHHHHHHH
Q 003987 703 ---IIEHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 703 ---iI~dg~~G~lv~p~d~~~lA~~I~~~l 729 (781)
.+.+..+.+.+|-.|.++..++|.++.
T Consensus 322 ~~~~~~~~~~~I~~De~dle~T~ekl~E~a 351 (355)
T PF11440_consen 322 GTRYIDHPYSAIYFDENDLESTVEKLIEVA 351 (355)
T ss_dssp SSBGGSS--S-EEE-TTSHHHHHHHHHHHH
T ss_pred CceeeccCcceeEeccchHHHHHHHHHHHh
Confidence 344455678899999999999997764
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.32 Score=58.42 Aligned_cols=150 Identities=13% Similarity=0.110 Sum_probs=95.0
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHH----HHHHHHhhcc----CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTGL----VECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~L----ieA~~~l~~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
..|+..+++...++++-|+..+|..... ++-+.++++. ...+.+++.|...+ .|..-++.++.+.+++
T Consensus 435 ~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP----~d~~gK~iIk~I~~va 510 (713)
T PF00343_consen 435 RTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHP----GDYMGKEIIKLINNVA 510 (713)
T ss_dssp HHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----T----T-HHHHHHHHHHHHHH
T ss_pred HhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCC----CcHHHHHHHHHHHHHH
Confidence 3455457778888999999999998883 4555565543 12367777776544 3455555666666666
Q ss_pred HHc----CCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 635 KTY----KLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 635 ~el----gL~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
+.. .+.+ +|.|+. ..+. .+.+.+-.++|+-.+.|. .|+.|..-+=||.-|.+.++|-.|...|+.+.
T Consensus 511 ~~in~Dp~v~~~lkVvFle----nYdv-slA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~ 585 (713)
T PF00343_consen 511 EVINNDPEVGDRLKVVFLE----NYDV-SLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEA 585 (713)
T ss_dssp HHHCT-TTTCCGEEEEEET----T-SH-HHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHH
T ss_pred HHHhcChhhccceeEEeec----CCcH-HHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHh
Confidence 532 3344 788986 3333 566666667999999875 89999999999999999999999999999864
Q ss_pred --CCeEEEECCCCHHHHH
Q 003987 707 --GASGFHIDPYHPDQAA 722 (781)
Q Consensus 707 --g~~G~lv~p~d~~~lA 722 (781)
.+++|++-. +.++..
T Consensus 586 vG~eN~fiFG~-~~~ev~ 602 (713)
T PF00343_consen 586 VGEENIFIFGL-TAEEVE 602 (713)
T ss_dssp H-GGGSEEES--BHHHHH
T ss_pred cCCCcEEEcCC-CHHHHH
Confidence 468899854 455543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=94.99 E-value=9.7 Score=44.48 Aligned_cols=78 Identities=17% Similarity=0.173 Sum_probs=49.4
Q ss_pred cEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccc-ccCCeEEEECC-
Q 003987 642 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEII-EHGASGFHIDP- 715 (781)
Q Consensus 642 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI-~dg~~G~lv~p- 715 (781)
.+.+.+ +++..++...-+ .+.||.= +=-++++||+.+|+|+|+. +....+..+ +.-+.|..++.
T Consensus 339 g~vv~~----W~PQ~~iL~h~~--vg~FitH----~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~ 408 (481)
T PLN02992 339 GFVVPS----WAPQAEILAHQA--VGGFLTH----CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP 408 (481)
T ss_pred CEEEee----cCCHHHHhCCcc--cCeeEec----CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC
Confidence 466666 455555554211 2235443 2235899999999999997 334445555 34556777743
Q ss_pred ---CCHHHHHHHHHHHH
Q 003987 716 ---YHPDQAAELMADFF 729 (781)
Q Consensus 716 ---~d~~~lA~~I~~~l 729 (781)
-+.++++++|.+++
T Consensus 409 ~~~~~~~~l~~av~~vm 425 (481)
T PLN02992 409 KEVISRSKIEALVRKVM 425 (481)
T ss_pred CCcccHHHHHHHHHHHh
Confidence 36788889898877
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=94.48 E-value=5.4 Score=43.43 Aligned_cols=57 Identities=14% Similarity=0.124 Sum_probs=38.8
Q ss_pred CcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc---ccccccccCCeEEEECCCCHHHHHHHHHHHH
Q 003987 666 KGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG---GPAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 666 advfV~PS~~E~fGltvlEAMa~GlPVVaT~~g---G~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l 729 (781)
|++++-- -|.-.-||...|+|.|.+.-| +..+... +.|.++..+|+.+..+...+.+
T Consensus 253 a~lvig~-----ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~~s~~~~~~~~~a~~~l 312 (346)
T COG1817 253 ATLVIGA-----GGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLYHSTDEIAIVEYAVRNL 312 (346)
T ss_pred hheeecC-----CchHHHHHHHhCCceEEecCCccccccHHHH--hcCceeecCCHHHHHHHHHHHh
Confidence 5555533 356678999999999998744 2333322 4688888888887777666555
|
|
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=93.37 E-value=17 Score=41.04 Aligned_cols=96 Identities=16% Similarity=0.221 Sum_probs=59.6
Q ss_pred HHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc----cccccccc
Q 003987 631 HELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEH 706 (781)
Q Consensus 631 ~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g----G~~EiI~d 706 (781)
+.++....-..+|.+.. +.. ..++...++. +|++|-.-+ -+++=||+.|+|+|+-.+. |..+-.
T Consensus 256 ~~ia~~~~~~~~i~~~~---d~~-~~~~~~~l~~-~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~-- 323 (385)
T COG2327 256 DAIAQLVLDSAEILVSS---DEY-AEELGGILAA-CDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDL-- 323 (385)
T ss_pred HHHHhhcCCccceEeec---chH-HHHHHHHhcc-CceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHc--
Confidence 33333333336677764 222 4667778884 888776543 4678899999999997533 333322
Q ss_pred CCeEEE--ECCCCHHHHHHHHHHHHHhccCCHHHHHH
Q 003987 707 GASGFH--IDPYHPDQAAELMADFFGKCKENPSHWKK 741 (781)
Q Consensus 707 g~~G~l--v~p~d~~~lA~~I~~~l~~l~~dp~~~~~ 741 (781)
|..|+. +.|.|.+.+.+...+.+. .+++.+++
T Consensus 324 gl~~~~~~i~~~~~~~l~~~~~e~~~---~~~~~~~~ 357 (385)
T COG2327 324 GLPGFAIDIDPLDAEILSAVVLERLT---KLDELRER 357 (385)
T ss_pred CCCcccccCCCCchHHHHHHHHHHHh---ccHHHHhh
Confidence 333444 467788888888887764 55555444
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=93.04 E-value=21 Score=41.31 Aligned_cols=86 Identities=5% Similarity=0.012 Sum_probs=52.6
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----cccccccccc-CCeEEEECC-----CCHHHH
Q 003987 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEH-GASGFHIDP-----YHPDQA 721 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~----~gG~~EiI~d-g~~G~lv~p-----~d~~~l 721 (781)
+++..++... . +.++||.=. =-.+++||+.+|+|+|+-. ....+..+.+ -+.|+.+.+ -+.+++
T Consensus 324 W~PQ~~vL~h-~-~v~~FvtH~----G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i 397 (453)
T PLN02764 324 WVQQPLILSH-P-SVGCFVSHC----GFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESL 397 (453)
T ss_pred CCCHHHHhcC-c-ccCeEEecC----CchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHH
Confidence 5555666552 1 145566542 2468999999999999973 3344555543 356766532 267888
Q ss_pred HHHHHHHHHhccCCH-HHHHHHHHHHH
Q 003987 722 AELMADFFGKCKENP-SHWKKISDGGL 747 (781)
Q Consensus 722 A~~I~~~l~~l~~dp-~~~~~~s~~a~ 747 (781)
++++.+++ .++ +..+++.++++
T Consensus 398 ~~av~~vm----~~~~~~g~~~r~~a~ 420 (453)
T PLN02764 398 RDAINSVM----KRDSEIGNLVKKNHT 420 (453)
T ss_pred HHHHHHHh----cCCchhHHHHHHHHH
Confidence 88888777 453 33444444444
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=92.54 E-value=26 Score=40.97 Aligned_cols=50 Identities=10% Similarity=0.055 Sum_probs=35.4
Q ss_pred HHHHHHHHcCCcEEEc----Ccccccccc-ccCCeEEEECC-------CCHHHHHHHHHHHH
Q 003987 680 LTVVEAMTCGLPTFAT----CHGGPAEII-EHGASGFHIDP-------YHPDQAAELMADFF 729 (781)
Q Consensus 680 ltvlEAMa~GlPVVaT----~~gG~~EiI-~dg~~G~lv~p-------~d~~~lA~~I~~~l 729 (781)
.+++||+++|+|+|+- |..-.+..+ +.-+.|+.+.. -+.++++++|.+++
T Consensus 368 nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm 429 (480)
T PLN00164 368 NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLM 429 (480)
T ss_pred chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHh
Confidence 4899999999999996 444444444 33467877642 25688888888776
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=92.00 E-value=0.079 Score=52.14 Aligned_cols=91 Identities=16% Similarity=0.292 Sum_probs=56.6
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc--------cccccccCCeEEE
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASGFH 712 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG--------~~EiI~dg~~G~l 712 (781)
.+|.+.++.. ++..+++. +|+.|.-+ =+.|+.|++++|+|.|.-...+ ....+.....|..
T Consensus 55 ~~v~~~~~~~------~m~~~m~~-aDlvIs~a----G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~ 123 (167)
T PF04101_consen 55 PNVKVFGFVD------NMAELMAA-ADLVISHA----GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIM 123 (167)
T ss_dssp CCCEEECSSS------SHHHHHHH-HSEEEECS-----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCC
T ss_pred CcEEEEechh------hHHHHHHH-cCEEEeCC----CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccc
Confidence 6799998544 36778885 99888853 2579999999999998865444 2233333334444
Q ss_pred ECCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 003987 713 IDPY--HPDQAAELMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 713 v~p~--d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
+... +++.+.++|.+++ .++.....+++++
T Consensus 124 ~~~~~~~~~~L~~~i~~l~----~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 124 LDESELNPEELAEAIEELL----SDPEKLKEMAKAA 155 (167)
T ss_dssp SECCC-SCCCHHHHHHCHC----CCHH-SHHHCCCH
T ss_pred cCcccCCHHHHHHHHHHHH----cCcHHHHHHHHHH
Confidence 4322 3566788885554 8888767666554
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=91.12 E-value=1.4 Score=49.26 Aligned_cols=132 Identities=12% Similarity=0.169 Sum_probs=65.1
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCCh------HHH--HHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNM------TGL--VECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl------~~L--ieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
.+|+ +.++.+|+|+=........ ... .+.+.. ...+++.|++-..-. +....
T Consensus 185 ~~~~--~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~li~k~Hp~----------------~~~~~ 244 (369)
T PF04464_consen 185 KLGI--DKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNF--LLKNNYVLIIKPHPN----------------MKKKF 244 (369)
T ss_dssp HTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHH--HHTTTEEEEE--SHH----------------HHTT-
T ss_pred Hhcc--CCCCcEEEEeeccccccccccccccccccCHHHHHH--HhCCCcEEEEEeCch----------------hhhch
Confidence 3565 5677799999655432222 111 222222 223577777655431 11111
Q ss_pred HH-cCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc--Cc-------ccccccc
Q 003987 635 KT-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT--CH-------GGPAEII 704 (781)
Q Consensus 635 ~e-lgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT--~~-------gG~~EiI 704 (781)
.. ....++|.+... ..++..++.. +|++|.= ++-++.|++.+++|||.- |. |...+ .
T Consensus 245 ~~~~~~~~~i~~~~~------~~~~~~ll~~-aDiLITD-----ySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~ 311 (369)
T PF04464_consen 245 KDFKEDNSNIIFVSD------NEDIYDLLAA-ADILITD-----YSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-Y 311 (369)
T ss_dssp ---TT-TTTEEE-TT-------S-HHHHHHT--SEEEES-----S-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--T
T ss_pred hhhhccCCcEEECCC------CCCHHHHHHh-cCEEEEe-----chhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-h
Confidence 11 344577888751 2368888885 9998875 567999999999999964 32 22222 2
Q ss_pred ccCCeEEEECCCCHHHHHHHHHHHH
Q 003987 705 EHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 705 ~dg~~G~lv~p~d~~~lA~~I~~~l 729 (781)
.+..-|-.+. +.+++.++|..++
T Consensus 312 ~~~~pg~~~~--~~~eL~~~i~~~~ 334 (369)
T PF04464_consen 312 EEDLPGPIVY--NFEELIEAIENII 334 (369)
T ss_dssp TTSSSS-EES--SHHHHHHHHTTHH
T ss_pred HhhCCCceeC--CHHHHHHHHHhhh
Confidence 2333455554 8999999997766
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=89.92 E-value=1.5 Score=50.95 Aligned_cols=132 Identities=14% Similarity=0.117 Sum_probs=74.2
Q ss_pred CCCEEEEEeeccCCCCh----HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003987 571 SKPIVFSMARLDHVKNM----TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl----~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~fl 646 (781)
++.++++.|.+.. ... ..++++++++ |. ++++.-++.. . -.+++++...
T Consensus 276 ~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~----~~-~~iW~~~~~~------------~---------~~l~~n~~~~ 328 (500)
T PF00201_consen 276 KGVVYVSFGSIVS-SMPEEKLKEIAEAFENL----PQ-RFIWKYEGEP------------P---------ENLPKNVLIV 328 (500)
T ss_dssp TEEEEEE-TSSST-T-HHHHHHHHHHHHHCS----TT-EEEEEETCSH------------G---------CHHHTTEEEE
T ss_pred CCEEEEecCcccc-hhHHHHHHHHHHHHhhC----CC-cccccccccc------------c---------ccccceEEEe
Confidence 4456788898753 222 3345555444 44 5665555422 0 0123567777
Q ss_pred ccccCcCChHHHHHHHHc-cCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCCeEEEECCC--CHH
Q 003987 647 AAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDPY--HPD 719 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~dg~~G~lv~p~--d~~ 719 (781)
. ++|-.++. +. ..++||.= |=-.++.||+.+|+|+|+- |....+..+++.+.|..++.. +.+
T Consensus 329 ~----W~PQ~~lL---~hp~v~~fitH----gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~ 397 (500)
T PF00201_consen 329 K----WLPQNDLL---AHPRVKLFITH----GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEE 397 (500)
T ss_dssp S----S--HHHHH---TSTTEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHH
T ss_pred c----cccchhhh---hcccceeeeec----cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHH
Confidence 6 55555554 32 13445542 2245899999999999997 334455566666678888654 567
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHH
Q 003987 720 QAAELMADFFGKCKENPSHWKKISD 744 (781)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~~s~ 744 (781)
++.++|.+++ +|+.+++...+
T Consensus 398 ~l~~ai~~vl----~~~~y~~~a~~ 418 (500)
T PF00201_consen 398 ELRAAIREVL----ENPSYKENAKR 418 (500)
T ss_dssp HHHHHHHHHH----HSHHHHHHHHH
T ss_pred HHHHHHHHHH----hhhHHHHHHHH
Confidence 7888887777 78876655433
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=89.48 E-value=27 Score=37.21 Aligned_cols=125 Identities=14% Similarity=0.132 Sum_probs=70.7
Q ss_pred CCCCCEEEEEeeccCC-------CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHc-CCC
Q 003987 569 DRSKPIVFSMARLDHV-------KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTY-KLD 640 (781)
Q Consensus 569 ~~~k~iIl~vGRL~~~-------Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~el-gL~ 640 (781)
..++++|++....... .+...+++.+..+.+..|+++++|-= .|......+ . ...++. +.
T Consensus 114 ~~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~-HP~~~~~~~------~----~~~~~~~~~- 181 (269)
T PF05159_consen 114 SKNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKP-HPDERGGNK------Y----SYLEELPNL- 181 (269)
T ss_pred cCCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEE-CchhhCCCC------h----hHhhhhhcC-
Confidence 5678888888877654 23455666666666666788876544 342111111 0 222222 33
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHH
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQ 720 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~ 720 (781)
.++.++.. ...++.++.. +|.++.-+ +.+-+||+.+|+||++-...- . ...|+..+....+.
T Consensus 182 ~~~~~~~~------~~~~~~Ll~~-s~~Vvtin-----StvGlEAll~gkpVi~~G~~~---Y---~~~glt~~~~~~~~ 243 (269)
T PF05159_consen 182 PNVVIIDD------DVNLYELLEQ-SDAVVTIN-----STVGLEALLHGKPVIVFGRAF---Y---AGWGLTDDRKLDEF 243 (269)
T ss_pred CCeEEECC------CCCHHHHHHh-CCEEEEEC-----CHHHHHHHHcCCceEEecCcc---c---CCCCccCcCCchhh
Confidence 34555431 2245677775 77655542 578999999999999963221 1 13466665544444
Q ss_pred HHH
Q 003987 721 AAE 723 (781)
Q Consensus 721 lA~ 723 (781)
+..
T Consensus 244 ~~~ 246 (269)
T PF05159_consen 244 WRA 246 (269)
T ss_pred hhc
Confidence 333
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=89.01 E-value=2.5 Score=45.15 Aligned_cols=99 Identities=16% Similarity=0.102 Sum_probs=62.7
Q ss_pred EEEEEeeccCCCCh--HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003987 574 IVFSMARLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (781)
Q Consensus 574 iIl~vGRL~~~Kgl--~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~ 651 (781)
+++..|.-...|.+ +...+.+..+.+. +++++++|+..+ .+..+++.+..+....+.+.|
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e------------~~~~~~i~~~~~~~~~~~~~~---- 185 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAE------------RELAEEIAAALGGPRVVNLAG---- 185 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhh------------HHHHHHHHHhcCCCccccCcC----
Confidence 34444443444443 4666666666654 689999987543 334444455443223344566
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 003987 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~ 696 (781)
..+-.|+..+++. +|++|.+.. | ++--|.+.|+|+|+--
T Consensus 186 ~~~l~e~~~li~~-~~l~I~~Ds----g-~~HlA~a~~~p~i~l~ 224 (279)
T cd03789 186 KTSLRELAALLAR-ADLVVTNDS----G-PMHLAAALGTPTVALF 224 (279)
T ss_pred CCCHHHHHHHHHh-CCEEEeeCC----H-HHHHHHHcCCCEEEEE
Confidence 5567899999996 999999842 3 4444569999999863
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia | Back alignment and domain information |
|---|
Probab=88.91 E-value=3.7 Score=45.51 Aligned_cols=180 Identities=13% Similarity=0.170 Sum_probs=122.7
Q ss_pred ccCCCC-CCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC-CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC-
Q 003987 563 HVGTLS-DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE-LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL- 639 (781)
Q Consensus 563 ~~g~l~-~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~-~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL- 639 (781)
++|... .+.+.+-++=-++.-.|+-..=+-+..+.-+..| .+..+.|.....- .+-..+..++..+.+
T Consensus 180 ~FGY~p~~~~~RvavfEPNi~vvK~~~~PmLi~E~aYR~~P~~v~~~~V~Nt~~~---------ke~~~F~~f~~~ldlv 250 (364)
T PF10933_consen 180 RFGYQPGRPGKRVAVFEPNISVVKTCFIPMLICEEAYRADPDAVEHVYVTNTYHL---------KEHPTFVNFANSLDLV 250 (364)
T ss_pred ccccccCCCCceEEEecCCceEEeecCccHHHHHHHHHhChhhcceEEEecchhh---------hcCHHHHHHHHhhHHh
Confidence 355533 2344455555667777774432222222222223 3556666655431 123455666666655
Q ss_pred -CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH
Q 003987 640 -DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718 (781)
Q Consensus 640 -~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~ 718 (781)
++...|-| +. +++.++++..|++|.=.+.-+.-...+||+--|=|.|-.. ..+. +.|+..+-.|.
T Consensus 251 r~gkasfeg----R~---~~p~fla~~tD~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~--d~GYYY~~fD~ 316 (364)
T PF10933_consen 251 RDGKASFEG----RF---DFPDFLAQHTDAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLK--DVGYYYPDFDA 316 (364)
T ss_pred hcCeeEEee----ec---ChHHHHHhCCCEEEeccccchhhHHHHHHHhcCCCcccCc-----chhc--ccCcCCCCccH
Confidence 57788988 33 4678888889999988887788888999999999998752 3443 37999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
.+=++++.+.+. +....++...+++++.+ ..++-...+-++.|++.|
T Consensus 317 ~~G~r~L~~A~~---~HD~~~~~Y~~ra~~~l-~~~~p~n~~nv~~y~~~L 363 (364)
T PF10933_consen 317 FEGARQLLRAIR---EHDADLDAYRARARRLL-DRLSPENPANVRAYEARL 363 (364)
T ss_pred HHHHHHHHHHHH---HccccHHHHHHHHHHHH-HhhCCCCHHHHHHHHHhh
Confidence 999999998875 66677888888888777 778888888888998875
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=88.71 E-value=54 Score=38.22 Aligned_cols=50 Identities=20% Similarity=0.220 Sum_probs=32.8
Q ss_pred HHHHHHHHcCCcEEEcC----cccccccc-ccCCeEEEEC------CCCHHHHHHHHHHHH
Q 003987 680 LTVVEAMTCGLPTFATC----HGGPAEII-EHGASGFHID------PYHPDQAAELMADFF 729 (781)
Q Consensus 680 ltvlEAMa~GlPVVaT~----~gG~~EiI-~dg~~G~lv~------p~d~~~lA~~I~~~l 729 (781)
++++||+++|+|+|+-. ..-.+..+ +.-+.|.-+. .-..++++++|.+++
T Consensus 364 nS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm 424 (470)
T PLN03015 364 SSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIV 424 (470)
T ss_pred hhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHH
Confidence 58999999999999973 33333333 3335566553 125667777777766
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=87.55 E-value=7.8 Score=44.85 Aligned_cols=85 Identities=12% Similarity=0.074 Sum_probs=55.4
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcE--EEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccccc-CCeEEEE
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGA--FVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEH-GASGFHI 713 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadv--fV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~d-g~~G~lv 713 (781)
.++.+.+ +++-.++.. ..++ ||.= +=-++++||+++|+|+|+. +....+..+.+ -+.|..+
T Consensus 334 ~g~~v~~----W~PQ~~iL~----H~~v~~FvTH----~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l 401 (451)
T PLN03004 334 KGMVVKS----WAPQVPVLN----HKAVGGFVTH----CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401 (451)
T ss_pred CcEEEEe----eCCHHHHhC----CCccceEecc----CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEe
Confidence 4566666 445555544 4665 4432 1235899999999999996 45555555644 3678877
Q ss_pred CC-----CCHHHHHHHHHHHHHhccCCHHHHHH
Q 003987 714 DP-----YHPDQAAELMADFFGKCKENPSHWKK 741 (781)
Q Consensus 714 ~p-----~d~~~lA~~I~~~l~~l~~dp~~~~~ 741 (781)
+. -+.++++++|.+++ .+++++++
T Consensus 402 ~~~~~~~~~~e~l~~av~~vm----~~~~~r~~ 430 (451)
T PLN03004 402 NESETGFVSSTEVEKRVQEII----GECPVRER 430 (451)
T ss_pred cCCcCCccCHHHHHHHHHHHh----cCHHHHHH
Confidence 53 26788888888777 67655544
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=85.17 E-value=7.6 Score=43.12 Aligned_cols=103 Identities=11% Similarity=0.044 Sum_probs=64.7
Q ss_pred CCCEEEEEeeccCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003987 571 SKPIVFSMARLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~ 648 (781)
++.+++..|.-.+.|... ...+.+..+.+ .+.+++++|+..+ ++.+...++++.......+.+.|
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~--~~~~vvl~ggp~e----------~e~~~~~~i~~~~~~~~~~~l~g- 249 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA--RGYEVVLTSGPDK----------DDLACVNEIAQGCQTPPVTALAG- 249 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEcCCCh----------HHHHHHHHHHHhcCCCccccccC-
Confidence 345566777655667654 55666666543 2578888876533 11222334443332223355667
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
..+-.++..+++. ++++|..-. -.+-=|-|.|+|||+=
T Consensus 250 ---~~sL~el~ali~~-a~l~v~nDS-----Gp~HlAaA~g~P~v~l 287 (352)
T PRK10422 250 ---KTTFPELGALIDH-AQLFIGVDS-----APAHIAAAVNTPLICL 287 (352)
T ss_pred ---CCCHHHHHHHHHh-CCEEEecCC-----HHHHHHHHcCCCEEEE
Confidence 6678999999996 999998742 3455577899999985
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=84.11 E-value=3.2 Score=48.11 Aligned_cols=100 Identities=11% Similarity=-0.045 Sum_probs=64.1
Q ss_pred HHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcc
Q 003987 470 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGS 549 (781)
Q Consensus 470 ~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~ 549 (781)
.....+|.+++.++..+...+.++. .++ ..++.+.++++|.+.+.+.-......
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~~~~------------------~L~--~~d~~~~y~ei~~s~~~~~~~~~~~~------ 258 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKATFV------------------SLS--NSDITSTYPEIDGSWFTYGQYESHLE------ 258 (495)
T ss_pred hhhhccceEecchhhhhhhhhhhhh------------------hcC--CCCcceeeccccchhccccccccchh------
Confidence 3566799999999877664333321 122 44588999999988776521111100
Q ss_pred hhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC
Q 003987 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL 603 (781)
Q Consensus 550 i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~ 603 (781)
-....+...|+ ...+..+..+-|+.+.||++.+++++..+....++
T Consensus 259 ------~~~~~r~~~~v--~~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~ 304 (495)
T KOG0853|consen 259 ------LRLPVRLYRGV--SGIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPE 304 (495)
T ss_pred ------cccccceeeee--cccceEeeeeeecCCCCCceeehhhHHhhhcccCC
Confidence 01112223444 34467788999999999999999999988765544
|
|
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=83.63 E-value=8.2 Score=40.19 Aligned_cols=103 Identities=15% Similarity=0.076 Sum_probs=60.2
Q ss_pred CCCCEEEEEeeccCCCChHH--HHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003987 570 RSKPIVFSMARLDHVKNMTG--LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~--LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG 647 (781)
+++.+++..|.=.+.|.+.. ..+.+..+.+.. ++++++|+..+ .+.+....+.+... ...+.+.|
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~----------~~~~~~~~~~~~~~-~~~~~~~~ 170 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEE----------QEKEIADQIAAGLQ-NPVINLAG 170 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHH----------HHHHHHHHHHTTHT-TTTEEETT
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchH----------HHHHHHHHHHHhcc-cceEeecC
Confidence 34456677777667777655 677777776643 78888888743 11222233333221 12577777
Q ss_pred cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 648 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
..+-.++..+++. +|++|.+- .-.+-=|.|.|+|+|+=
T Consensus 171 ----~~~l~e~~ali~~-a~~~I~~D-----tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 171 ----KTSLRELAALISR-ADLVIGND-----TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp ----TS-HHHHHHHHHT-SSEEEEES-----SHHHHHHHHTT--EEEE
T ss_pred ----CCCHHHHHHHHhc-CCEEEecC-----ChHHHHHHHHhCCEEEE
Confidence 5678899999995 99999983 24566688999999996
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=82.85 E-value=12 Score=41.16 Aligned_cols=100 Identities=16% Similarity=0.042 Sum_probs=62.9
Q ss_pred CCCE-EEEEee-ccCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003987 571 SKPI-VFSMAR-LDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 571 ~k~i-Il~vGR-L~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~fl 646 (781)
++++ ++..|. ..+.|.+. ...+.+..+.+. +.+++++|+..+ .+...++.+..+ ...+.+.
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~--~~~ivl~G~~~e------------~~~~~~i~~~~~-~~~~~l~ 237 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ--GYQVVLFGSAKD------------HPAGNEIEALLP-GELRNLA 237 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC--CCEEEEEEChhh------------HHHHHHHHHhCC-cccccCC
Confidence 3444 455554 34667665 566666666542 478888887643 233333333322 1223356
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
| ..+-.++..+++. +|++|..-. -.+-=|-|.|+|+|+=
T Consensus 238 g----~~sL~el~ali~~-a~l~I~~DS-----Gp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 238 G----ETSLDEAVDLIAL-AKAVVTNDS-----GLMHVAAALNRPLVAL 276 (334)
T ss_pred C----CCCHHHHHHHHHh-CCEEEeeCC-----HHHHHHHHcCCCEEEE
Confidence 6 6678999999996 999998842 3455677999999984
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=80.59 E-value=19 Score=35.94 Aligned_cols=63 Identities=21% Similarity=0.129 Sum_probs=42.9
Q ss_pred CCceEEEEcCCCchHHHHHHHHHc------CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEE
Q 003987 406 GFPDFIIGNYSDGNLVASLLAYKM------GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII 479 (781)
Q Consensus 406 ~kpDIIh~~~~~~~lva~llar~~------gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~II 479 (781)
.+||+|++|.+.......++++.+ |.++|++=- ....+ ... ..-++++.-||..+
T Consensus 91 ~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES-~aRv~--~lS----------------lTGklly~~aD~f~ 151 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIES-FARVK--TLS----------------LTGKLLYPFADRFI 151 (170)
T ss_pred hCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEe-eeecC--CCc----------------hHHHHHHHhCCEEE
Confidence 389999999999988888888888 888887521 11100 000 11234566799999
Q ss_pred ecCHHHHh
Q 003987 480 TSTYQEIA 487 (781)
Q Consensus 480 t~S~~~~~ 487 (781)
+.-++.++
T Consensus 152 VQW~~l~~ 159 (170)
T PF08660_consen 152 VQWEELAE 159 (170)
T ss_pred EcCHHHHh
Confidence 98887655
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=80.20 E-value=12 Score=43.48 Aligned_cols=79 Identities=16% Similarity=0.157 Sum_probs=48.1
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----cccccc-ccccCCeEEEECC
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAE-IIEHGASGFHIDP 715 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~----~gG~~E-iI~dg~~G~lv~p 715 (781)
++..+.+ +++..++...= +.++||.=. |+ .+++||+++|+|+|+-. ..-.+. +++.-+.|..+..
T Consensus 340 ~rg~v~~----w~PQ~~iL~h~--~vg~fvtH~---G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~ 409 (475)
T PLN02167 340 GRGLVCG----WAPQVEILAHK--AIGGFVSHC---GW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRL 409 (475)
T ss_pred cCeeeec----cCCHHHHhcCc--ccCeEEeeC---Cc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeec
Confidence 3445555 55555555421 144566542 22 48999999999999963 333332 3444456877642
Q ss_pred ---------CCHHHHHHHHHHHH
Q 003987 716 ---------YHPDQAAELMADFF 729 (781)
Q Consensus 716 ---------~d~~~lA~~I~~~l 729 (781)
-+.++++++|.+++
T Consensus 410 ~~~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 410 DYVSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred ccccccCCcccHHHHHHHHHHHh
Confidence 26778888887776
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=80.14 E-value=91 Score=33.56 Aligned_cols=86 Identities=12% Similarity=0.099 Sum_probs=52.1
Q ss_pred hHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccC
Q 003987 587 MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTK 666 (781)
Q Consensus 587 l~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aa 666 (781)
+..+++++..+.+.. +.+++++..... .| .+..+++.+.+.-...| +. ..+..|+..+++. +
T Consensus 190 ~~~l~~~l~~l~~~~-g~~v~~i~~~~~----~D------~~~~~~l~~~~~~~~~i--~~----~~~~~e~~~~i~~-~ 251 (298)
T TIGR03609 190 LLRLLRALDRLQRDT-GAFVLFLPFQQP----QD------LPLARALRDQLLGPAEV--LS----PLDPEELLGLFAS-A 251 (298)
T ss_pred HHHHHHHHHHHHHhh-CCeEEEEeCCcc----hh------HHHHHHHHHhcCCCcEE--Ee----cCCHHHHHHHHhh-C
Confidence 456666666665432 456655554321 11 23334444444322333 23 4467899999996 8
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 667 GAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 667 dvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
+++|--.+ -..+=|+.+|+|+++-
T Consensus 252 ~~vI~~Rl-----H~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 252 RLVIGMRL-----HALILAAAAGVPFVAL 275 (298)
T ss_pred CEEEEech-----HHHHHHHHcCCCEEEe
Confidence 87777654 4678899999999975
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 781 | ||||
| 3s28_A | 816 | The Crystal Structure Of Sucrose Synthase-1 In Comp | 0.0 | ||
| 3s27_A | 816 | The Crystal Structure Of Sucrose Synthase-1 From Ar | 0.0 | ||
| 2r60_A | 499 | Structure Of Apo Sucrose Phosphate Synthase (Sps) O | 1e-39 | ||
| 2jjm_A | 394 | Crystal Structure Of A Family Gt4 Glycosyltransfera | 1e-05 | ||
| 3mbo_A | 414 | Crystal Structure Of The Glycosyltransferase Babsha | 2e-05 |
| >pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose Length = 816 | Back alignment and structure |
|
| >pdb|3S27|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. Length = 816 | Back alignment and structure |
|
| >pdb|2R60|A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii Length = 499 | Back alignment and structure |
|
| >pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394 | Back alignment and structure |
|
| >pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 781 | |||
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 0.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 1e-159 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 3e-44 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 1e-21 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 3e-21 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 1e-17 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 4e-17 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 1e-16 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-16 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-06 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 5e-13 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 5e-11 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 1e-09 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 3e-08 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 3e-08 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 6e-05 |
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 996 bits (2577), Expect = 0.0
Identities = 512/752 (68%), Positives = 623/752 (82%), Gaps = 3/752 (0%)
Query: 2 AAPKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGR 61
A ++R+ S RER+ +TL RNE+++LLSR A+GKGILQ + +I E + + ++ R
Sbjct: 4 AERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEAL--PEQTR 61
Query: 62 QNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFK 121
+ L GPF +++KS QEAIVLPP+VA+AVRPRPGVWEY+RVN++ L VE+L +E+LHFK
Sbjct: 62 KKLEGGPFFDLLKSTQEAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFK 121
Query: 122 EELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLL 181
EELVD N F LELDFEPFNA+ PRP IGNGV FLNRHLS+ +F +K+ L PLL
Sbjct: 122 EELVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNRHLSAKLFHDKESLLPLL 181
Query: 182 DFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKG 241
FLR H ++G LML+++IQ+++ LQ +L KAE++L++L +T + +FE + +G E+G
Sbjct: 182 KFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERG 241
Query: 242 WGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDT 301
WGD AE VL+M+ LLLD+L+APDP TLE FLGR+PMVFNVVILSPHGYF Q NVLG PDT
Sbjct: 242 WGDNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDT 301
Query: 302 GGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEH 361
GGQVVYILDQVRALE EML RIK+QGL+I P+ILI+TRL+PDA GTTC +RLERV +E+
Sbjct: 302 GGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEY 361
Query: 362 THILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLV 421
ILRVPFR+EKGI+R+WISRF+VWPYLET+TED E++ EL G PD IIGNYSDGNLV
Sbjct: 362 CDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLV 421
Query: 422 ASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481
ASLLA+K+G+TQCTIAHALEKTKYPDSDIYWKK D+KYHFSCQFTAD+ AMN+ DFIITS
Sbjct: 422 ASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITS 481
Query: 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQK 541
T+QEIAG+K TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPY+E+++
Sbjct: 482 TFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKR 541
Query: 542 RLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLR 601
RLT H IE+LL+ +N EH+ L D+ KPI+F+MARLD VKN++GLVE YGKN++LR
Sbjct: 542 RLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLR 601
Query: 602 ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRY 661
EL NLVVV G +SKD EE AE++KM++L++ YKL+GQFRWI++Q +R RNGELYRY
Sbjct: 602 ELANLVVVGGDRR-KESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRY 660
Query: 662 IADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQA 721
I DTKGAFVQPA YEAFGLTVVEAMTCGLPTFATC GGPAEII HG SGFHIDPYH DQA
Sbjct: 661 ICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQA 720
Query: 722 AELMADFFGKCKENPSHWKKISDGGLKRIYER 753
A+ +ADFF KCKE+PSHW +IS GGL+RI E+
Sbjct: 721 ADTLADFFTKCKEDPSHWDEISKGGLQRIEEK 752
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 471 bits (1214), Expect = e-159
Identities = 131/491 (26%), Positives = 212/491 (43%), Gaps = 58/491 (11%)
Query: 272 LGRLPMVFNVVILSPHGYFGQANVLGL--PDTGGQVVYILDQVRALENEMLLRIKRQGLD 329
+ + + +V L+P G F A+ PD GGQ+VY+ + AL G+
Sbjct: 1 MVEMTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALA--------EMGVQ 52
Query: 330 ISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYL 389
+ I+TR I D + ++ T I+R+PF +K ++ + ++WPYL
Sbjct: 53 VD----IITRRIKDENWPEFSGEIDYYQETNKVRIVRIPFGGDK-----FLPKEELWPYL 103
Query: 390 ETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSD 449
+ + + E FP + +Y DG L LL G+ H+L K +
Sbjct: 104 HEYVNKIINFY-REEGKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGAQKMEKLN 162
Query: 450 IY---WKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPG 506
+ +K+ DE++ F + A+ + M+ AD II ST QE G QY
Sbjct: 163 VNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFG------QYS-------HD 209
Query: 507 LYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 566
LYR ++ D KF+++ PG + ++ + + + +E+ L
Sbjct: 210 LYRGAVNVED-DDKFSVIPPGVNTRVFDGEYGDKIK-AKITKYLERDLGSE--------- 258
Query: 567 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVN----KSKDRE 622
P + + +RLD KN GLVE Y +N +L++ NLV+ I+ +E
Sbjct: 259 --RMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQE 316
Query: 623 EIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTV 682
E + K+ EL+ G+ + + Y Y+A F +FYE FGL
Sbjct: 317 EKEILGKIIELIDNNDCRGKVSMFPLNSQQELA-GCYAYLASKGSVFALTSFYEPFGLAP 375
Query: 683 VEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 742
VEAM GLP T +GGPAEI++ G G +DP P+ A + F E+ W
Sbjct: 376 VEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAF----ESEETWSAY 431
Query: 743 SDGGLKRIYER 753
+ G +R+ ER
Sbjct: 432 QEKGKQRVEER 442
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 3e-44
Identities = 87/474 (18%), Positives = 163/474 (34%), Gaps = 88/474 (18%)
Query: 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKIL 335
M V ++S H G D+GG VYIL L +QG+++
Sbjct: 20 HM--RVAMISMHTS--PLQQPGTGDSGGMNVYILSTATEL--------AKQGIEVD---- 63
Query: 336 IVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTED 395
I TR ++G E V E+ ++ + + +S+ ++ L FT
Sbjct: 64 IYTRATRPSQG-------EIVRVAENLRVINIAAGP-----YEGLSKEELPTQLAAFTGG 111
Query: 396 VGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKF 455
+ S + D I +Y V LL I AH L K ++
Sbjct: 112 MLSFT-RREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNS-----YRDD 165
Query: 456 DEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515
+ + + ++NAD + +T +E+ ++H D
Sbjct: 166 SDTPESEARRICEQQLVDNADVLAVNTQEEMQ---------------------DLMHHYD 204
Query: 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIV 575
+ ++VSPGAD+++Y P +++ S +L +V
Sbjct: 205 ADPDRISVVSPGADVELYSPGNDRATE-----RSRRELGIPLH-------------TKVV 246
Query: 576 FSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635
+ RL K L++ NL V+ + + + +
Sbjct: 247 AFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTY------RHMAE 300
Query: 636 TYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695
++ + R++ + +YR AD P+F E+FGL +EA G P A
Sbjct: 301 ELGVEKRIRFLDPRPPSELV-AVYR-AAD---IVAVPSFNESFGLVAMEAQASGTPVIAA 355
Query: 696 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749
GG + G +G +D + P A+ +A ++ ++ + ++
Sbjct: 356 RVGGLPIAVAEGETGLLVDGHSPHAWADALATLL----DDDETRIRMGEDAVEH 405
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 1e-21
Identities = 80/469 (17%), Positives = 157/469 (33%), Gaps = 120/469 (25%)
Query: 299 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358
P GG V + + L +G +I +T +P RL +V
Sbjct: 24 PSVGGSGVVGTELGKQL--------AERGHEIH----FITSGLPF--------RLNKVY- 62
Query: 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDG 418
+ + V S F PY + +E+ D + +Y+
Sbjct: 63 -PNIYFHEVTVNQ--------YSVFQYPPYDLALASKM-AEVAQREN--LDILHVHYAIP 110
Query: 419 NLVASLLAYKMGITQCTI---AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNA 475
+ + + LA +M + I H +DI D + +F +
Sbjct: 111 HAICAYLAKQMIGERIKIVTTLHG--------TDITVLGSDPSLNNLIRFGI-----EQS 157
Query: 476 DFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP 535
D + V L H + + V D +YF
Sbjct: 158 DVVTA------------VSHS----------LINETHELVKPNKDIQTVYNFIDERVYFK 195
Query: 536 YSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595
Q + ++ + I+ ++ VK + +V+ +
Sbjct: 196 RDMTQLK--------KEYGISES-------------EKILIHISNFRKVKRVQDVVQAF- 233
Query: 596 KNSQLRELVNL-VVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRAR 654
+++ V+ +++ G D E I +L+K ++ + ++ Q N A
Sbjct: 234 --AKIVTEVDAKLLLVG--------DGPEFCTIL---QLVKNLHIEDRVLFLGKQDNVA- 279
Query: 655 NGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHID 714
EL ++D + + E+FGL ++EAM CG+P T GG E+I+HG +G+ +
Sbjct: 280 --ELLA-MSD---LMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCE 333
Query: 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVD 763
+AD + ++ + + + + +YE+ S+ IV
Sbjct: 334 VGDTTG----VADQAIQLLKDEELHRNMGERARESVYEQF--RSEKIVS 376
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 3e-21
Identities = 51/246 (20%), Positives = 90/246 (36%), Gaps = 37/246 (15%)
Query: 520 KFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMA 579
K I+ P D KQ + + +E+ DPE KPI+ ++
Sbjct: 195 KAVIMPPSIDPLSEKNVELKQTEILRI---LERFDVDPE-------------KPIITQVS 238
Query: 580 RLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEI--EKMHELMKTY 637
R D K + ++E Y K + V L++V + D E + + ++ + Y
Sbjct: 239 RFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGV-----MAHDDPEGWIYFEKTLRKIGEDY 293
Query: 638 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH 697
+ I R +D +Q + E FGLTV EAM G P
Sbjct: 294 DVKVLTNLIGVHAREVN--AFQR-ASD---VILQMSIREGFGLTVTEAMWKGKPVIGRAV 347
Query: 698 GGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757
GG I G +GF + ++A E++ ++P K++ +R+ +
Sbjct: 348 GGIKFQIVDGETGFLVRD--ANEAVEVVLYLL----KHPEVSKEMGAKAKERVRKN--FI 399
Query: 758 SDGIVD 763
++
Sbjct: 400 ITKHME 405
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 1e-17
Identities = 56/451 (12%), Positives = 111/451 (24%), Gaps = 114/451 (25%)
Query: 302 GGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEH 361
GG + + +G + + T+ +
Sbjct: 14 GGLQRDFMRIASTV--------AARGHHVR----VYTQSWEGDCP-------------KA 48
Query: 362 THILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLV 421
+++VP + + V + + D ++G L
Sbjct: 49 FELIQVPVK-----------SHTNHGRNAEYYAWVQNHLKEHP---ADRVVGFNKMPGLD 94
Query: 422 ASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITS 481
A + +Y F + ++
Sbjct: 95 VYFAADVCYAEKVAQEKGFLYRLTS-----------RYRHYAAFERATFEQGKSTKLMML 143
Query: 482 TYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQK 541
T ++IA +F I+ PG D +
Sbjct: 144 TDKQIA---------------------DFQKHYQTEPERFQILPPGIYPDRKYSEQIPNS 182
Query: 542 RLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK-NSQL 600
R ++ +Q ++ + K + +E L
Sbjct: 183 REIYR----QKNGIKEQQ-------------NLLLQVGSDFGRKGVDRSIEALASLPESL 225
Query: 601 RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYR 660
R L VV + K L + + + + + + + EL
Sbjct: 226 RHNTLLFVVGQ-------------DKPRKFEALAEKLGVRSNVHFFSGRNDVS---ELMA 269
Query: 661 YIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI-DPYHPD 719
AD + PA+ EA G+ ++EA+T GLP T G A I G I +P+ +
Sbjct: 270 -AAD---LLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQE 325
Query: 720 QAAELMADFFGKCKENPSHWKKISDGGLKRI 750
Q E++ ++
Sbjct: 326 QLNEVLRKAL----TQSPLRMAWAENARHYA 352
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 83.3 bits (205), Expect = 4e-17
Identities = 37/335 (11%), Positives = 81/335 (24%), Gaps = 39/335 (11%)
Query: 445 YPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTL 504
+ + + F ++ I ++ D ++ Y + N + + T
Sbjct: 52 FDAQTAEHVRGLNEQGFYYSGLSEFIDVHKPDIVMI--YNDPIVIGNYLLAMGKCSHRTK 109
Query: 505 PGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHV 564
LY + ++ + + I S + S+ +G + D
Sbjct: 110 IVLYVDLVSKNIRENLWWIFSH-PKVVGVMAMSKCWISDICNYGCKVPINIVSHFVDTKT 168
Query: 565 GTLSDRS--------KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVN 616
+ + + +M R K + V + + + +
Sbjct: 169 IYDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHES 228
Query: 617 KSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYE 676
K + + + R +Y D V + E
Sbjct: 229 KFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYN-ACD---VIVNCSSGE 284
Query: 677 AFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYH------------------P 718
FGL E G P + GG + G + I P
Sbjct: 285 GFGLCSAEGAVLGKPLIISAVGGADDYFS-GDCVYKIKPSAWISVDDRDGIGGIEGIIDV 343
Query: 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753
D E ++ + K+ + +
Sbjct: 344 DDLVEAF-----TFFKDEKNRKEYGKRVQDFVKTK 373
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 77.6 bits (192), Expect = 1e-16
Identities = 32/170 (18%), Positives = 62/170 (36%), Gaps = 24/170 (14%)
Query: 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMH 631
S+ R+ K + +E + K + L +V + + E+
Sbjct: 23 GDFWLSVNRIYPEKRIELQLEVFKKLQDEK----LYIVGWF---------SKGDHAERYA 69
Query: 632 ELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP 691
+ D +++ + + +LY + A E FGLT +EAM G P
Sbjct: 70 RKIMKIAPD-NVKFLGSVSEEELI-DLYS-RCK---GLLCTAKDEDFGLTPIEAMASGKP 123
Query: 692 TFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK 741
A GG E + + +G+ ++ ++ + M +NP +KK
Sbjct: 124 VIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVS----KNPDKFKK 168
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 82.2 bits (202), Expect = 4e-16
Identities = 97/631 (15%), Positives = 174/631 (27%), Gaps = 217/631 (34%)
Query: 163 NRHLSSSM----FRNKDCLEPLLD-FLRAHKYKGHLLMLNDRIQSISRLQSSLSKAE-DH 216
+ H+ ++ KD L D F+ K + D +SI LSK E DH
Sbjct: 4 HHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKD----VQDMPKSI------LSKEEIDH 53
Query: 217 LSKLPPDTPFSQFEYVLQGMGFEKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGR-- 274
+ + L L + ++KF+
Sbjct: 54 IIMSK--------------------------DAVSGTLRLFWTLLSKQEEMVQKFVEEVL 87
Query: 275 ------LPMVFNVVILSPHG----YFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIK 324
L P Y Q + L V+ V L+ + LR
Sbjct: 88 RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRL----YNDNQVFAKYNVSRLQPYLKLRQA 143
Query: 325 RQGLDISPKILIV-------TRLIPDAKGTTC-NQRLERVSGTEHTHILRVPFRSEKGIL 376
L + +LI T + D C + +++ ++ F I
Sbjct: 144 LLELRPAKNVLIDGVLGSGKTWVALDV----CLSYKVQC----------KMDF----KIF 185
Query: 377 RQWISRFDVWPYLETFTEDVGSEITAE-----LQGFPDFIIGNYSDGNLVASLLAYKMGI 431
W++ + + + E LQ I N++ + +S + ++
Sbjct: 186 --WLN--------------LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229
Query: 432 TQCTIAHALEKTKYPDS-----DIY----WKKFDEKYHFSCQF---TADLIAMNNADFII 479
Q + L+ Y + ++ W F+ SC+ T DF+
Sbjct: 230 IQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN----LSCKILLTTRF---KQVTDFLS 282
Query: 480 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSP------GADMD 531
+T I+ +++ L D + +P +
Sbjct: 283 AATTTHISLDHHSMTLTPDEVK----SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR 338
Query: 532 I------YFPYSEKQKRLTALHGSIEQL-------LFD-----PEQNDEHV--GTLS--- 568
+ + K T + S+ L +FD P H+ LS
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP--SAHIPTILLSLIW 396
Query: 569 -DRSKPIVFSMARLDHVKNMTGLVECYGKNS-------------QLRELVNL--VVVAGY 612
D K V + H LVE K S +L L +V Y
Sbjct: 397 FDVIKSDVMVVVNKLHKY---SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHY 453
Query: 613 IDVNKSKDREEI-------------------AEIEKMHELMKTYKLDGQFRWIAA---QT 650
++ K+ D +++ E + L + LD FR++
Sbjct: 454 -NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLD--FRFLEQKIRHD 510
Query: 651 NRARNG-----------ELYR-YIADTKGAF 669
+ A N + Y+ YI D +
Sbjct: 511 STAWNASGSILNTLQQLKFYKPYICDNDPKY 541
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 68.7 bits (167), Expect = 6e-12
Identities = 86/581 (14%), Positives = 170/581 (29%), Gaps = 141/581 (24%)
Query: 16 VEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKS 75
VE+ L ++ L+S + Q + + + I++ D ++ D++ F+
Sbjct: 83 VEEVLRINYKFLMSPIKTEQRQPSMMTRMY--IEQRDRLYNDNQ--------VFA----- 127
Query: 76 AQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLH----F-KEELV-DASF 129
V R +P + +R + EL + + + K + D
Sbjct: 128 -------KYNV---SRLQP-YLK-LRQALLELRPAKNVL---IDGVLGSGKTWVALDVCL 172
Query: 130 NERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEP---------- 179
+ + ++DF+ F N ++ +Q L + + D
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232
Query: 180 -LLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGF 238
L L++ Y+ LL+L + +Q+ + A + K+ T F Q L
Sbjct: 233 ELRRLLKSKPYENCLLVLLN-VQN-----AKAWNAFNLSCKILLTTRFKQVTDFLSA--- 283
Query: 239 EKGWGDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGL 298
T L+ + L L
Sbjct: 284 ----ATTTHISLDHHSMTLT-----PDEVKSLL---------------------LKYLDC 313
Query: 299 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKIL-IVTRLIPDAKGTTCNQRLERVS 357
+ L R+ L +P+ L I+ I D T + V+
Sbjct: 314 RP-----------------QDL---PREVLTTNPRRLSIIAESIRDGLAT--WDNWKHVN 351
Query: 358 GTEHTHILRVPFRS-EKGILRQWISRFDVWPYLETFTEDVGSEITAEL-----QGFPDFI 411
+ T I+ E R+ FD L F I L
Sbjct: 352 CDKLTTIIESSLNVLEPAEYRK---MFD---RLSVFPPSA--HIPTILLSLIWFDVIKSD 403
Query: 412 IGNYSDGNLVASLLAYKMGITQCTIAHAL---EKTKYPDSDIYWKKFDEKYHFSCQFTAD 468
+ + SL+ + + +I ++ K K + + + Y+ F +D
Sbjct: 404 VMVVVNKLHKYSLVEKQPKESTISI-PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD 462
Query: 469 LIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLY--------RVVHGIDVFDPK 520
+ D Y I + E T F ++ ++ H ++
Sbjct: 463 DLIPPYLDQYF---YSHIGHHLKNIEHPERMTLF--RMVFLDFRFLEQKIRHDSTAWNAS 517
Query: 521 FNIVSPGADMDIYFPY-SEKQKRLTALHGSIEQLLFDPEQN 560
+I++ + Y PY + + L +I L E+N
Sbjct: 518 GSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEEN 558
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 3e-06
Identities = 54/395 (13%), Positives = 123/395 (31%), Gaps = 128/395 (32%)
Query: 444 KYPDSDI---YWKKFDEKYHFSCQFTADLIAMNNADFIITST-YQEIAGTKNTVGQYESH 499
+Y DI + F +F C+ D+ I++ I +K+ V +
Sbjct: 15 QYQYKDILSVFEDAF--VDNFDCKDVQDMPKS-----ILSKEEIDHIIMSKDAVSG--TL 65
Query: 500 TAFTL------PGLYRVVHGIDVFDPKFNIVS--------PGADMDIYFPYSEKQKRLTA 545
F + + V + + KF ++S P +Y ++
Sbjct: 66 RLFWTLLSKQEEMVQKFVEEVLRINYKF-LMSPIKTEQRQPSMMTRMYIEQRDR------ 118
Query: 546 LHGSIEQLLFDPEQNDEHVGTLSDRSKPIVF---SMARLDHVKN-----MTGLVECYGKN 597
L+ + +F +V R +P + ++ L KN + G GK
Sbjct: 119 LYNDNQ--VFAKY----NV----SRLQPYLKLRQALLELRPAKNVLIDGVLG---S-GKT 164
Query: 598 SQLRELVNLVVVAG-----------YIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646
+ V ++ ++++ E + +E + +L+ Y++D +
Sbjct: 165 W----VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV--LEMLQKLL--YQIDPNWTSR 216
Query: 647 AAQTNRAR------NGELYRYIADTKGAF-------VQ-PAFYEAFGL---TVV----EA 685
+ ++ + EL R + VQ + AF L ++ +
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQ 276
Query: 686 MTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG-KCKENPSHWKKISD 744
+T L T H ++H + PD+ L+ + + ++ P +
Sbjct: 277 VTDFLSAATTTH----ISLDHHSMTLT-----PDEVKSLLLKYLDCRPQDLPREVLTTN- 326
Query: 745 GGLKRIYERLVVSSDGIVDPSPFVINVISMPTQNH 779
P +++I+ ++
Sbjct: 327 ---------------------PRRLSIIAESIRDG 340
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 5e-13
Identities = 23/181 (12%), Positives = 63/181 (34%), Gaps = 31/181 (17%)
Query: 573 PIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMH 631
+ + R + KN + L++ + + ++V ++ G + +I+
Sbjct: 3 FKIAMVGRYSNEKNQSVLIKAV---ALSKYKQDIVLLLKG--------KGPDEKKIKL-- 49
Query: 632 ELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP 691
L + + +F ++ N E+ + +V A E+ + +EA++ G+
Sbjct: 50 -LAQKLGVKAEFGFV----NSNELLEILK-TCT---LYVHAANVESEAIACLEAISVGIV 100
Query: 692 --TFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749
+ + S F +P + + + + EN +++ + K
Sbjct: 101 PVIANSPLSATRQFALDERSLF--EPNNAKDLSAKIDWWL----ENKLERERMQNEYAKS 154
Query: 750 I 750
Sbjct: 155 A 155
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 5e-11
Identities = 38/252 (15%), Positives = 78/252 (30%), Gaps = 49/252 (19%)
Query: 509 RVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLS 568
R P F + G D+ + P + + K + ++L F
Sbjct: 153 RRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKS-----ATRKKLGFTDT---------- 197
Query: 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 628
P++ +RL K L++ + R L++V + +
Sbjct: 198 ---TPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVG---------SGRYESTLR 245
Query: 629 KMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQP-------AFYEAFGLT 681
++ + +++ + AD F P E G+
Sbjct: 246 RLAT-----DVSQNVKFLGRLEYQDMI-NTLA-AAD---IFAMPARTRGGGLDVEGLGIV 295
Query: 682 VVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK 741
+EA CG+P A GG E + +G ++ D+ +EL+ + ++P
Sbjct: 296 YLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELL----DDPIRRAA 350
Query: 742 ISDGGLKRIYER 753
+ G +
Sbjct: 351 MGAAGRAHVEAE 362
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 1e-09
Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Query: 657 ELYRYIADTKGAFVQPAFY-EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDP 715
R AD + P E+FG+ +VEAM G A+ ++ G +G +
Sbjct: 278 SAMR-SAD---VYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPV 333
Query: 716 YHPDQAAE 723
D A
Sbjct: 334 DDADGMAA 341
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 55.6 bits (133), Expect = 3e-08
Identities = 7/96 (7%), Positives = 28/96 (29%), Gaps = 9/96 (9%)
Query: 657 ELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 716
+L + + + +E GL + ++ ++ ++
Sbjct: 310 DLLK-RSS---IGISLMISPHPSYPPLEMAHFGLRVITNKYENK-DLSNWHSNIVSLEQL 364
Query: 717 HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE 752
+P+ AE + + + ++ ++
Sbjct: 365 NPENIAETLVELC----MSFNNRDVDKKESSNMMFY 396
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 3e-08
Identities = 28/165 (16%), Positives = 42/165 (25%), Gaps = 25/165 (15%)
Query: 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIE 628
+ + M R+ K +V+AG + E EI
Sbjct: 159 VAKEDFLLFMGRVSPHKGALEAAAF------AHACGRRLVLAGPAW-----EPEYFDEIT 207
Query: 629 KMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIA-----DTKGAFVQPAFYEAFGLTVV 683
+ I R L A + E V
Sbjct: 208 RR--------YGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVS 259
Query: 684 EAMTCGLPTFATCHGGPAEIIEHGASGF-HIDPYHPDQAAELMAD 727
EA G P T +G AEI+ + + PD+A +A
Sbjct: 260 EAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDFAPDEARRTLAG 304
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 6e-05
Identities = 14/58 (24%), Positives = 20/58 (34%)
Query: 659 YRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPY 716
Y V P++YE +G T E G+P+ T G +E Y
Sbjct: 512 YDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDY 569
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 781 | |||
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 100.0 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 100.0 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.97 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.97 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.96 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.96 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.96 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.95 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.95 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.95 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.93 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.93 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.91 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.9 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.9 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.81 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.81 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.77 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.76 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.73 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.73 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.72 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.68 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.68 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.67 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.63 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.62 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.46 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.4 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 99.4 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 99.37 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 99.37 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.35 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 99.32 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.31 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.25 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 99.21 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 99.19 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.02 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.89 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 97.85 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 97.78 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 97.76 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 97.64 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 97.64 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 97.42 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.36 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 96.46 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 95.57 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 87.55 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 84.28 |
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-170 Score=1517.66 Aligned_cols=762 Identities=67% Similarity=1.117 Sum_probs=708.9
Q ss_pred CCCCCCCcchHHHHHHHHhHhHHHHHHHHHHHHhcCCcccchhhHHHHHHhhhcCcccccccCCCcHHHHHhhcceeeec
Q 003987 3 APKLSRIPSIRERVEDTLSVHRNELVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVL 82 (781)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 82 (781)
+++|+|++||+|+++++|++||++|++||++|+++||++|++|||+++|+++|+ .+++++.+|+||++|++||||||.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 82 (816)
T 3s28_A 5 ERMITRVHSQRERLNETLVSERNEVLALLSRVEAKGKGILQQNQIIAEFEALPE--QTRKKLEGGPFFDLLKSTQEAIVL 82 (816)
T ss_dssp ----------------------CTTHHHHHHHHHHHTCSEEEEHHHHHHTTTTT--SCGGGCCCSTHHHHHHTEEEEEEC
T ss_pred ccccccchhHHHHHHHHHHHhHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHH--hhhcccccCcHHHHHHhhhheeec
Confidence 368999999999999999999999999999999999999999999999999993 466888999999999999999999
Q ss_pred CCeEEEEEcCCCceEEEEEEecCcceeeecChHHHhhhcchhcccccCCCceeeeeccccccCCCCCCCCCCCCchhhhh
Q 003987 83 PPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDASFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFL 162 (781)
Q Consensus 83 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (781)
|||||||||||||+|||||||++||+||+|||+|||+|||+|||++.+++++||+||+|||++||+|++|+||||||+||
T Consensus 83 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (816)
T 3s28_A 83 PPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEELVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFL 162 (816)
T ss_dssp SSEEEEEEEEETTEEEEEEEETTSSCEEEECHHHHHHHHHHHHHSSCCCTTSCEEECGGGGTTSCCCCCGGGTTBHHHHH
T ss_pred CCeEEEEEcCCCcceEEEEEEhhhCceeeecHHHHHHhHHHhcCCCCCCCCceEEeccccccCCCCCCCcccccCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccCCCCCCchhHHHHHhhcccCCeeeecccccCCHHHHHHHHHHHHHHhcCCCCCCCchhHHHHhhhcCCcccc
Q 003987 163 NRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDRIQSISRLQSSLSKAEDHLSKLPPDTPFSQFEYVLQGMGFEKGW 242 (781)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw 242 (781)
|||||||||+|++++++||+||+.|+|+|++|||||||+|+++|++||++|++||+++|+||||++|+++||+|||||||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (816)
T 3s28_A 163 NRHLSAKLFHDKESLLPLLKFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGW 242 (816)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHCEETTEEBSBCTTCCSHHHHHHHHHHHHHHHHHSCTTCBHHHHHHHHHHTTBCBCS
T ss_pred HHHHHhhhcCChhhhHHHHHHHHHcccCCeeeeccCCcCCHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHhhcCCCcccHhhhhcCCCCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHH
Q 003987 243 GDTAEHVLEMMHLLLDILQAPDPSTLEKFLGRLPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLR 322 (781)
Q Consensus 243 g~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~r~p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~ 322 (781)
||||+||+|||++|+++|++|||++||+|++|+||+|||+|+|+|||++|.+++|.||||||++||+|||||||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~ 322 (816)
T 3s28_A 243 GDNAERVLDMIRLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQR 322 (816)
T ss_dssp CSBHHHHHHHHHHHHHHHHSCCHHHHHHHHHHSCCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHhcCCCcccHHHHhccCCceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHH
Q 003987 323 IKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITA 402 (781)
Q Consensus 323 L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~ 402 (781)
|+++||+|+|+|+|+|+.+++..++.|.++.+.+.++++++|+|+|+++.++++++|++++.+|+|+..|...+...+..
T Consensus 323 L~~~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~ 402 (816)
T 3s28_A 323 IKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSK 402 (816)
T ss_dssp HHHTTCCCCCEEEEEEECCTTCTTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHH
T ss_pred HHHCCCccceeeEEEeCCCCCCCCCccCCcceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888899999999999999999888887777
Q ss_pred HcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecC
Q 003987 403 ELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITST 482 (781)
Q Consensus 403 ~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S 482 (781)
..+++|||||+|++.+++++.++++++|+|+|+|+|+++..++..++.+|+.+...|++++++.++..+++.||.|||+|
T Consensus 403 ~~~~~PDVIHsH~~~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S 482 (816)
T 3s28_A 403 ELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITST 482 (816)
T ss_dssp HCSSCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESC
T ss_pred hcCCCCeEEEeCCchHHHHHHHHHHHcCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECC
Confidence 76779999999999999999999999999999999999988888888899999999999999999999999999999999
Q ss_pred HHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccccc
Q 003987 483 YQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDE 562 (781)
Q Consensus 483 ~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~ 562 (781)
.++++.+.+.+++|.++.+|++|++|++++|++++.+|+.|||||+|.+.|.|......++...++.+++.++++.+.++
T Consensus 483 ~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~ 562 (816)
T 3s28_A 483 FQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKE 562 (816)
T ss_dssp HHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTT
T ss_pred HHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHH
Confidence 99999888999999999999999999999999999999999999999999999887766777788889999999999999
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ 642 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~ 642 (781)
.+|++.++++++|+|+||+++.||++.+++|++++.+.+++++|+|+|+|++ ..+.++++.++.++++++++++++.++
T Consensus 563 ~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~-~~~~~~e~~~~~~~L~~li~~lgL~~~ 641 (816)
T 3s28_A 563 HLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRR-KESKDNEEKAEMKKMYDLIEEYKLNGQ 641 (816)
T ss_dssp EESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTT-SCCCCHHHHHHHHHHHHHHHHTTCBBB
T ss_pred HhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCc-ccccchhhHHHHHHHHHHHHHcCCCCc
Confidence 9999888899999999999999999999999999988778999999999986 677889999999999999999999999
Q ss_pred EEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHH
Q 003987 643 FRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAA 722 (781)
Q Consensus 643 V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA 722 (781)
|+|+|++++.++.+++++++++++|+||+||.+|+||++++||||||+|||+|+.||+.|+|.++.+|++++|+|++++|
T Consensus 642 V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA 721 (816)
T 3s28_A 642 FRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAA 721 (816)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHH
T ss_pred EEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHH
Confidence 99999888888889999999966899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 723 ELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
++|.++++++..|++.+++|+++|++++.++|||+.. ++.|.+++
T Consensus 722 ~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~--a~~ll~lY 766 (816)
T 3s28_A 722 DTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIY--SQRLLTLT 766 (816)
T ss_dssp HHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHH--HHHHHHHH
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHH--HHHHHHHH
Confidence 9999998888899999999999999999999999764 34444444
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=421.69 Aligned_cols=435 Identities=28% Similarity=0.474 Sum_probs=314.1
Q ss_pred CCceeEEEEccCcCCcccc--cCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcce
Q 003987 276 PMVFNVVILSPHGYFGQAN--VLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRL 353 (781)
Q Consensus 276 p~~mrI~ivS~h~~~~~~~--vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~ 353 (781)
.|.|||++++++++|.... +.+.|..||.++++. +|++.|+++||+|+ |+|..........+....
T Consensus 5 ~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~ 72 (499)
T 2r60_A 5 TRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVK--------EVSLALAEMGVQVD----IITRRIKDENWPEFSGEI 72 (499)
T ss_dssp --CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCCBTTBGGGCCSE
T ss_pred cccceEEEEecCCCccccccccCCCCCCCCeeehHH--------HHHHHHHhcCCeEE----EEeCCCCcccccchhhhH
Confidence 4458999999998875422 244578899999999 77777899999999 988764321111222223
Q ss_pred eeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcE
Q 003987 354 ERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQ 433 (781)
Q Consensus 354 e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~ 433 (781)
+......+++++++|..... +..+..+|.++..+...+.+.+++. ..+|||||+|++..++++.++++..++|+
T Consensus 73 ~~~~~~~gv~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~Divh~~~~~~~~~~~~~~~~~~~p~ 146 (499)
T 2r60_A 73 DYYQETNKVRIVRIPFGGDK-----FLPKEELWPYLHEYVNKIINFYREE-GKFPQVVTTHYGDGGLAGVLLKNIKGLPF 146 (499)
T ss_dssp EECTTCSSEEEEEECCSCSS-----CCCGGGCGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHHHCCCE
T ss_pred HhccCCCCeEEEEecCCCcC-----CcCHHHHHHHHHHHHHHHHHHHHhc-CCCCCEEEEcCCcchHHHHHHHHhcCCcE
Confidence 33322347899999876432 2233456666655555555555543 24899999998777788888899999999
Q ss_pred EEEecCCcccCCC---CChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceee
Q 003987 434 CTIAHALEKTKYP---DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRV 510 (781)
Q Consensus 434 v~t~H~l~~~k~~---~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v 510 (781)
|++.|+....... ........+...|++......+..+++.||.||++|....+.+.+..
T Consensus 147 v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~----------------- 209 (499)
T 2r60_A 147 TFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHD----------------- 209 (499)
T ss_dssp EEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSG-----------------
T ss_pred EEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhh-----------------
Confidence 9999986432210 00000011122233323334566789999999999988765221110
Q ss_pred ecc-C-CC-CCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccC-----CCCCCCCCEEEEEeecc
Q 003987 511 VHG-I-DV-FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG-----TLSDRSKPIVFSMARLD 582 (781)
Q Consensus 511 ~~g-i-~~-f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g-----~l~~~~k~iIl~vGRL~ 582 (781)
..| + +. ...++.|||||+|.+.|.+......+. ..++.+| + ++++++|+++||+.
T Consensus 210 ~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~---------------~~r~~~~~~~~~~--~~~~~~i~~vGrl~ 272 (499)
T 2r60_A 210 LYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKA---------------KITKYLERDLGSE--RMELPAIIASSRLD 272 (499)
T ss_dssp GGTTTCCTTCGGGEEECCCCBCTTTSSSCCCHHHHH---------------HHHHHHHHHSCGG--GTTSCEEEECSCCC
T ss_pred cccccccccCCCCeEEECCCcChhhcCccchhhhHH---------------HHHHHhccccccc--CCCCcEEEEeecCc
Confidence 002 1 00 256899999999999887764311110 0012344 3 45778999999999
Q ss_pred CCCChHHHHHHHHHhhccCCC-eEEEEEeCcCCCCCCc---chHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHH
Q 003987 583 HVKNMTGLVECYGKNSQLREL-VNLVVVAGYIDVNKSK---DREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGEL 658 (781)
Q Consensus 583 ~~Kgl~~LieA~~~l~~~~~~-v~LvIVG~g~~~~~~~---d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el 658 (781)
+.||++.+++|++++.+..++ +.|+|+|+++.+..++ +.++.++.+.++++++++++.++|+|+| .++.+++
T Consensus 273 ~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G----~v~~~~~ 348 (499)
T 2r60_A 273 QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFP----LNSQQEL 348 (499)
T ss_dssp GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEE----CCSHHHH
T ss_pred cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECC----CCCHHHH
Confidence 999999999999998765444 5899999833210110 1234455788999999999999999999 6778899
Q ss_pred HHHHHccC----cEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccC
Q 003987 659 YRYIADTK----GAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKE 734 (781)
Q Consensus 659 ~~~la~aa----dvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~ 734 (781)
..+|+. + |++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|++++|+|+++++++|.+++ .
T Consensus 349 ~~~~~~-a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll----~ 423 (499)
T 2r60_A 349 AGCYAY-LASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAF----E 423 (499)
T ss_dssp HHHHHH-HHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTTCHHHHHHHHHHHH----S
T ss_pred HHHHHh-cCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCCCHHHHHHHHHHHH----h
Confidence 999995 9 999999999999999999999999999999999999999999999999999999999998887 8
Q ss_pred CHHHHHHHHHHHHHHHHHhcCcchh--hhccchHHHHHh
Q 003987 735 NPSHWKKISDGGLKRIYERLVVSSD--GIVDPSPFVINV 771 (781)
Q Consensus 735 dp~~~~~~s~~a~~~~~~~ysw~~~--~il~~ye~ll~~ 771 (781)
|++.++++++++++++.++|||+.+ .+.+.|+++++.
T Consensus 424 ~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 424 SEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999989999876 555666666643
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=395.60 Aligned_cols=410 Identities=21% Similarity=0.296 Sum_probs=297.4
Q ss_pred CceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeee
Q 003987 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (781)
Q Consensus 277 ~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v 356 (781)
.+|||+|++.+.+|.. ..|.+..||.+.++. +|++.|.++||+|+ |+|....... ......
T Consensus 19 ~mmkIl~i~~~~~p~~--~~~~~~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~-----~~~~~~ 79 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQ--QPGTGDSGGMNVYIL--------STATELAKQGIEVD----IYTRATRPSQ-----GEIVRV 79 (438)
T ss_dssp CCCEEEEECTTSCTTC--C-------CHHHHHH--------HHHHHHHHTTCEEE----EEEECCCGGG-----CSEEEE
T ss_pred chheeeeEEeeccccc--cCCCCCCCCHHHHHH--------HHHHHHHhcCCEEE----EEecCCCCCC-----cccccc
Confidence 3589999998877531 123446899999999 77777899999999 8886632110 111111
Q ss_pred cCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEE
Q 003987 357 SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 436 (781)
Q Consensus 357 ~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t 436 (781)
..++++++++.....+ .++..++.++..+...+.+..... ..+||+||+|++..++++.++++..++|+|++
T Consensus 80 --~~~v~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~ 151 (438)
T 3c48_A 80 --AENLRVINIAAGPYEG-----LSKEELPTQLAAFTGGMLSFTRRE-KVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHT 151 (438)
T ss_dssp --ETTEEEEEECCSCSSS-----CCGGGGGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHHHHTCCEEEE
T ss_pred --cCCeEEEEecCCCccc-----cchhHHHHHHHHHHHHHHHHHHhc-cCCCCEEEeCCccHHHHHHHHHHHcCCCEEEE
Confidence 2368888888754321 223344555555554444442222 22499999998777777888888899999999
Q ss_pred ecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003987 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (781)
Q Consensus 437 ~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~ 516 (781)
.|+............ . ..........+...++.+|.||++|....+.+.+. .|++
T Consensus 152 ~h~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~g~~- 206 (438)
T 3c48_A 152 AHTLAAVKNSYRDDS----D-TPESEARRICEQQLVDNADVLAVNTQEEMQDLMHH-------------------YDAD- 206 (438)
T ss_dssp CSSCHHHHSCC--------C-CHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHH-------------------HCCC-
T ss_pred ecCCccccccccccc----C-CcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHH-------------------hCCC-
Confidence 998754321110000 0 00000111235567899999999998876532211 1333
Q ss_pred CCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHH
Q 003987 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (781)
Q Consensus 517 f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~ 596 (781)
..++.+||||+|.+.|.+....... ..++.+|+ ++++++|+++||+.+.||++.+++|+.+
T Consensus 207 -~~k~~vi~ngvd~~~~~~~~~~~~~----------------~~r~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~~ 267 (438)
T 3c48_A 207 -PDRISVVSPGADVELYSPGNDRATE----------------RSRRELGI--PLHTKVVAFVGRLQPFKGPQVLIKAVAA 267 (438)
T ss_dssp -GGGEEECCCCCCTTTSCCC----CH----------------HHHHHTTC--CSSSEEEEEESCBSGGGCHHHHHHHHHH
T ss_pred -hhheEEecCCccccccCCcccchhh----------------hhHHhcCC--CCCCcEEEEEeeecccCCHHHHHHHHHH
Confidence 5689999999999988775432100 01134666 5678899999999999999999999999
Q ss_pred hhccCC--CeEEEEEeC----cCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEE
Q 003987 597 NSQLRE--LVNLVVVAG----YIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFV 670 (781)
Q Consensus 597 l~~~~~--~v~LvIVG~----g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV 670 (781)
+.+..| +++|+|+|+ |+. .+.++++++++++.++|.|+| .++.+++..+|+. +|++|
T Consensus 268 l~~~~p~~~~~l~i~G~~~~~g~~------------~~~l~~~~~~~~l~~~v~~~g----~~~~~~~~~~~~~-adv~v 330 (438)
T 3c48_A 268 LFDRDPDRNLRVIICGGPSGPNAT------------PDTYRHMAEELGVEKRIRFLD----PRPPSELVAVYRA-ADIVA 330 (438)
T ss_dssp HHHHCTTCSEEEEEECCBC------------------CHHHHHHHHTTCTTTEEEEC----CCCHHHHHHHHHH-CSEEE
T ss_pred HHhhCCCcceEEEEEeCCCCCCcH------------HHHHHHHHHHcCCCCcEEEcC----CCChHHHHHHHHh-CCEEE
Confidence 988766 899999998 433 567889999999999999999 6677899999995 99999
Q ss_pred EcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 671 QPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 671 ~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
+||.+|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ .|++.++++++++++++
T Consensus 331 ~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~ 406 (438)
T 3c48_A 331 VPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLL----DDDETRIRMGEDAVEHA 406 (438)
T ss_dssp ECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHH
T ss_pred ECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998887 79999999999999999
Q ss_pred HHhcCcchh--hhccchHHHHHhcCCCCcCC
Q 003987 751 YERLVVSSD--GIVDPSPFVINVISMPTQNH 779 (781)
Q Consensus 751 ~~~ysw~~~--~il~~ye~ll~~~~~~~~~~ 779 (781)
.+ |||+.. .+.+.|+++++.-.+..++|
T Consensus 407 ~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T 3c48_A 407 RT-FSWAATAAQLSSLYNDAIANENVDGETH 436 (438)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHTCCCCSCCC
T ss_pred Hh-CCHHHHHHHHHHHHHHHhhhcccCCCcC
Confidence 77 999876 66677777776655444443
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-43 Score=390.64 Aligned_cols=405 Identities=16% Similarity=0.141 Sum_probs=299.2
Q ss_pred ceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCc---------
Q 003987 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT--------- 348 (781)
Q Consensus 278 ~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~--------- 348 (781)
.|||++++++.+| +..||.++++. +|+++|+++||+|+ |+|...+......
T Consensus 2 ~MkIl~v~~~~~p--------~~~gG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~~~~~ 61 (439)
T 3fro_A 2 HMKVLLLGFEFLP--------VKVGGLAEALT--------AISEALASLGHEVL----VFTPSHGRFQGEEIGKIRVFGE 61 (439)
T ss_dssp CCEEEEECSCCTT--------SCSSSHHHHHH--------HHHHHHHHTTCEEE----EEEECTTCSCCEEEEEEEETTE
T ss_pred ceEEEEEecccCC--------cccCCHHHHHH--------HHHHHHHHCCCeEE----EEecCCCCchhhhhccccccCc
Confidence 4899999987763 36899999999 77778899999999 9997654432110
Q ss_pred -cCcceeeecCCCCeEEEEeccCCCcccccccccccCchh--------hHHHHHHHHHHHHHHHc--CCCceEEEEcCCC
Q 003987 349 -CNQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWP--------YLETFTEDVGSEITAEL--QGFPDFIIGNYSD 417 (781)
Q Consensus 349 -~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~--------yl~~f~~~~~~~i~~~~--~~kpDIIh~~~~~ 417 (781)
...... .....++.++++|. .. ..+..+++ .+..+...+.+.+...+ ..+|||||+|++.
T Consensus 62 ~~~~~~~-~~~~~gv~v~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~ 132 (439)
T 3fro_A 62 EVQVKVS-YEERGNLRIYRIGG-GL-------LDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWH 132 (439)
T ss_dssp EEEEEEE-EEEETTEEEEEEES-GG-------GGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGG
T ss_pred ccceeee-eccCCCceEEEecc-hh-------ccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchh
Confidence 000000 00234688888877 21 11222222 11224444444444331 5699999999988
Q ss_pred chHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccc
Q 003987 418 GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYE 497 (781)
Q Consensus 418 ~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qye 497 (781)
.++++.++++..++|+|++.|+...............+... .+......+..+++.||.|+++|....+. ..+.
T Consensus 133 ~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ad~ii~~S~~~~~~---~~~~-- 206 (439)
T 3fro_A 133 TVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSEL-APYPDIDPEHTGGYIADIVTTVSRGYLID---EWGF-- 206 (439)
T ss_dssp GHHHHHHHHHHHCCCEEEEESCCCCCCEEHHHHHHTTCGGG-CCSSEECHHHHHHHHCSEEEESCHHHHHH---THHH--
T ss_pred hhhhHHHHhhccCCCEEEEecccccccCchHHhCccccccc-cccceeeHhhhhhhhccEEEecCHHHHHH---Hhhh--
Confidence 88888999999999999999998654332111111111100 01112245667899999999999877652 1110
Q ss_pred cccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCc----HHHHHHhhhhcchhhhccCccccccccCCCCCCCCC
Q 003987 498 SHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYS----EKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKP 573 (781)
Q Consensus 498 s~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~----~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~ 573 (781)
++....++.+||||+|.+.|.|.. ....+ ...++.+|+ +++ +
T Consensus 207 ----------------~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~---------------~~~~~~~~~--~~~-~ 252 (439)
T 3fro_A 207 ----------------FRNFEGKITYVFNGIDCSFWNESYLTGSRDERK---------------KSLLSKFGM--DEG-V 252 (439)
T ss_dssp ----------------HGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHH---------------HHHHHHHTC--CSC-E
T ss_pred ----------------hhhcCCceeecCCCCCchhcCcccccchhhhhH---------------HHHHHHcCC--CCC-c
Confidence 112377999999999999988752 11111 012245676 445 8
Q ss_pred EEEEEeecc-CCCChHHHHHHHHHhhccC--CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecccc
Q 003987 574 IVFSMARLD-HVKNMTGLVECYGKNSQLR--ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQT 650 (781)
Q Consensus 574 iIl~vGRL~-~~Kgl~~LieA~~~l~~~~--~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~ 650 (781)
+|+++||+. +.||++.+++|++++.+.. ++++|+|+|+|+. .+.+.+++++++++ +.+.|.|
T Consensus 253 ~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~----------~~~~~l~~~~~~~~--~~~~~~g--- 317 (439)
T 3fro_A 253 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP----------ELEGWARSLEEKHG--NVKVITE--- 317 (439)
T ss_dssp EEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCH----------HHHHHHHHHHHHCT--TEEEECS---
T ss_pred EEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCCh----------hHHHHHHHHHhhcC--CEEEEcC---
Confidence 999999999 9999999999999998876 8999999999975 34588999999998 7788888
Q ss_pred CcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHH
Q 003987 651 NRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFG 730 (781)
Q Consensus 651 ~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~ 730 (781)
.++.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ +|++++++|+++++++|.+++
T Consensus 318 -~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll- 393 (439)
T 3fro_A 318 -MLSREFVRELYGS-VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKAL- 393 (439)
T ss_dssp -CCCHHHHHHHHTT-CSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHH-
T ss_pred -CCCHHHHHHHHHH-CCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEeCCCCHHHHHHHHHHHH-
Confidence 6778999999995 999999999999999999999999999999999999999887 999999999999999999888
Q ss_pred hccC-CHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhcCCCC
Q 003987 731 KCKE-NPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVISMPT 776 (781)
Q Consensus 731 ~l~~-dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~~~~~ 776 (781)
. |++.++++++++++.+ ++|||+. +++.|.+++..+....
T Consensus 394 ---~~~~~~~~~~~~~~~~~~-~~~s~~~--~~~~~~~~~~~~~~~~ 434 (439)
T 3fro_A 394 ---ELSRSDLSKFRENCKKRA-MSFSWEK--SAERYVKAYTGSIDRA 434 (439)
T ss_dssp ---HHTTTTTHHHHHHHHHHH-HTSCHHH--HHHHHHHHHHTCSCCB
T ss_pred ---hcCHHHHHHHHHHHHHHH-hhCcHHH--HHHHHHHHHHHHHHhh
Confidence 5 8999999999999999 7899955 5677888877654433
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-41 Score=386.87 Aligned_cols=328 Identities=16% Similarity=0.160 Sum_probs=231.3
Q ss_pred CCceEEEEcCCCchHHHHHHHHHc-------CCcEEEEecCCcccCCC-CChh--------hHhhhh--cc---ccchhh
Q 003987 406 GFPDFIIGNYSDGNLVASLLAYKM-------GITQCTIAHALEKTKYP-DSDI--------YWKKFD--EK---YHFSCQ 464 (781)
Q Consensus 406 ~kpDIIh~~~~~~~lva~llar~~-------gvp~v~t~H~l~~~k~~-~s~~--------~~k~~~--~~---y~f~~~ 464 (781)
+.+||||+|+|.+++++.+++... ++|+|+|+|++...... .... .+.... .. ..+...
T Consensus 152 ~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (536)
T 3vue_A 152 GEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRK 231 (536)
T ss_dssp CSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEE
T ss_pred CCCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccc
Confidence 457899999999988888887654 69999999997554311 0000 000000 00 011112
Q ss_pred hhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHh
Q 003987 465 FTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLT 544 (781)
Q Consensus 465 ~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~ 544 (781)
....+..+..||.|+|+|+..++.+....+.- ..+.. .....++.+|+||+|.+.|.|.++......
T Consensus 232 ~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g-----~~l~~--------~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~ 298 (536)
T 3vue_A 232 INWMKAGILEADRVLTVSPYYAEELISGIARG-----CELDN--------IMRLTGITGIVNGMDVSEWDPSKDKYITAK 298 (536)
T ss_dssp EEHHHHHHHHCSEEEESCHHHHHHHHTTCCCC-----SSSCC--------CSCCCSCEECCCCCCTTTSCTTTCSSSSCC
T ss_pred hhHHHHHHHhccEEEEcCHHHhhhhhcccccc-----ccccc--------ccccCCeEEEECCcchhhcCCCCccccccc
Confidence 33456788999999999998765433221100 00111 111568999999999999988542110000
Q ss_pred hh-hcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHH
Q 003987 545 AL-HGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREE 623 (781)
Q Consensus 545 ~~-~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee 623 (781)
.. ...++....++....+.+|+..+++.|+|+++||+.+.||++.|++|+.++.+ .+++|+|+|.|..
T Consensus 299 ~~~~~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~--~~~~l~l~G~G~~--------- 367 (536)
T 3vue_A 299 YDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ--EDVQIVLLGTGKK--------- 367 (536)
T ss_dssp CCTTTHHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTT--SSCEEEEECCBCH---------
T ss_pred cchhhhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHh--hCCeEEEEeccCc---------
Confidence 00 00000000111223356788778899999999999999999999999999976 4689999999865
Q ss_pred HHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccc
Q 003987 624 IAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEI 703 (781)
Q Consensus 624 ~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~Ei 703 (781)
.....++..+..+ .++|.+.+ ..+.+++..+++. +|+||+||++|+||++++|||+||+|||+|++||++|+
T Consensus 368 -~~~~~~~~~~~~~--~~~v~~~~----~~~~~~~~~~~~~-aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~ 439 (536)
T 3vue_A 368 -KFEKLLKSMEEKY--PGKVRAVV----KFNAPLAHLIMAG-ADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDT 439 (536)
T ss_dssp -HHHHHHHHHHHHS--TTTEEEEC----SCCHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHH
T ss_pred -hHHHHHHHHHhhc--CCceEEEE----eccHHHHHHHHHh-hheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchhe
Confidence 3345556666655 46899998 5677888888985 99999999999999999999999999999999999999
Q ss_pred cccCCeEE----------EECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhc
Q 003987 704 IEHGASGF----------HIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 704 I~dg~~G~----------lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~ 772 (781)
|.||++|+ +++|.|+++++++|.++++ +..++ .|++|.+++ +.++|||++ +++.|++++..+
T Consensus 440 V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~-~~~~~-~~~~~~~~a---m~~~fSW~~--~A~~y~~ly~~L 511 (536)
T 3vue_A 440 VIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK-VVGTP-AYEEMVRNC---MNQDLSWKG--PAKNWENVLLGL 511 (536)
T ss_dssp CCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH-HTTSH-HHHHHHHHH---HHSCCSSHH--HHHHHHHHHHTT
T ss_pred eeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHH-hcCcH-HHHHHHHHH---HHhcCCHHH--HHHHHHHHHHHh
Confidence 99999999 6788899999999998874 33444 577887766 447899966 457788888765
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-40 Score=361.23 Aligned_cols=369 Identities=15% Similarity=0.218 Sum_probs=281.1
Q ss_pred CceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeee
Q 003987 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (781)
Q Consensus 277 ~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v 356 (781)
++|||++++++.. |..||.+.++. .|++.| +||+|+ |+|...+... ....
T Consensus 3 ~~mkIl~v~~~~~---------p~~gG~~~~~~--------~l~~~L--~g~~v~----v~~~~~~~~~-------~~~~ 52 (394)
T 3okp_A 3 ASRKTLVVTNDFP---------PRIGGIQSYLR--------DFIATQ--DPESIV----VFASTQNAEE-------AHAY 52 (394)
T ss_dssp -CCCEEEEESCCT---------TSCSHHHHHHH--------HHHTTS--CGGGEE----EEEECSSHHH-------HHHH
T ss_pred CCceEEEEeCccC---------CccchHHHHHH--------HHHHHh--cCCeEE----EEECCCCccc-------hhhh
Confidence 3589999997644 45799999999 666667 699999 8887643210 0111
Q ss_pred cCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCc-EEE
Q 003987 357 SGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGIT-QCT 435 (781)
Q Consensus 357 ~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp-~v~ 435 (781)
....++.++++|..... ..+ .+...+.+.+.+. +||+||+|..........++++.++| +++
T Consensus 53 ~~~~~~~~~~~~~~~~~----------~~~----~~~~~l~~~~~~~---~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~ 115 (394)
T 3okp_A 53 DKTLDYEVIRWPRSVML----------PTP----TTAHAMAEIIRER---EIDNVWFGAAAPLALMAGTAKQAGASKVIA 115 (394)
T ss_dssp HTTCSSEEEEESSSSCC----------SCH----HHHHHHHHHHHHT---TCSEEEESSCTTGGGGHHHHHHTTCSEEEE
T ss_pred ccccceEEEEccccccc----------cch----hhHHHHHHHHHhc---CCCEEEECCcchHHHHHHHHHhcCCCcEEE
Confidence 22336788888765421 111 2233444444443 89999999877654455557778887 778
Q ss_pred EecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCC
Q 003987 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (781)
Q Consensus 436 t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~ 515 (781)
+.|+... .|.. ...++ ......++.+|.|+++|....+...+. .+
T Consensus 116 ~~h~~~~--------~~~~-~~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~-- 160 (394)
T 3okp_A 116 STHGHEV--------GWSM-LPGSR-----QSLRKIGTEVDVLTYISQYTLRRFKSA-------------------FG-- 160 (394)
T ss_dssp ECCSTHH--------HHTT-SHHHH-----HHHHHHHHHCSEEEESCHHHHHHHHHH-------------------HC--
T ss_pred Eeccchh--------hhhh-cchhh-----HHHHHHHHhCCEEEEcCHHHHHHHHHh-------------------cC--
Confidence 9997532 1110 01111 123457889999999998876532221 11
Q ss_pred CCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHH
Q 003987 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYG 595 (781)
Q Consensus 516 ~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~ 595 (781)
...++.+||||+|.+.|.+........ .++.+|+ ++++++|+++||+.+.||++.+++|+.
T Consensus 161 -~~~~~~vi~ngv~~~~~~~~~~~~~~~----------------~~~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~ 221 (394)
T 3okp_A 161 -SHPTFEHLPSGVDVKRFTPATPEDKSA----------------TRKKLGF--TDTTPVIACNSRLVPRKGQDSLIKAMP 221 (394)
T ss_dssp -SSSEEEECCCCBCTTTSCCCCHHHHHH----------------HHHHTTC--CTTCCEEEEESCSCGGGCHHHHHHHHH
T ss_pred -CCCCeEEecCCcCHHHcCCCCchhhHH----------------HHHhcCC--CcCceEEEEEeccccccCHHHHHHHHH
Confidence 156999999999999998844332111 1244676 567799999999999999999999999
Q ss_pred HhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCC
Q 003987 596 KNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 675 (781)
Q Consensus 596 ~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 675 (781)
++.+..++++|+|+|+|+. .+.+++++ .++.++|.|+| .++.+++..+++. +|++|+||.+
T Consensus 222 ~l~~~~~~~~l~i~G~g~~------------~~~l~~~~--~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~v~ps~~ 282 (394)
T 3okp_A 222 QVIAARPDAQLLIVGSGRY------------ESTLRRLA--TDVSQNVKFLG----RLEYQDMINTLAA-ADIFAMPART 282 (394)
T ss_dssp HHHHHSTTCEEEEECCCTT------------HHHHHHHT--GGGGGGEEEEE----SCCHHHHHHHHHH-CSEEEECCCC
T ss_pred HHHhhCCCeEEEEEcCchH------------HHHHHHHH--hcccCeEEEcC----CCCHHHHHHHHHh-CCEEEecCcc
Confidence 9988889999999999976 56777777 56778999999 6778999999995 9999999999
Q ss_pred -------CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 003987 676 -------EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLK 748 (781)
Q Consensus 676 -------E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~ 748 (781)
|+||++++|||+||+|||+|+.||..|++.++ +|++++++|+++++++|.+++ .|++.++++++++++
T Consensus 283 ~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~ 357 (394)
T 3okp_A 283 RGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELL----DDPIRRAAMGAAGRA 357 (394)
T ss_dssp BGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHH----TCHHHHHHHHHHHHH
T ss_pred ccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999999999998887 899999999999999
Q ss_pred HHHHhcCcchhhhccchHHHHHhc
Q 003987 749 RIYERLVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 749 ~~~~~ysw~~~~il~~ye~ll~~~ 772 (781)
.+.++|||+. +++.|.++++..
T Consensus 358 ~~~~~~s~~~--~~~~~~~~~~~~ 379 (394)
T 3okp_A 358 HVEAEWSWEI--MGERLTNILQSE 379 (394)
T ss_dssp HHHHHTBHHH--HHHHHHHHHHSC
T ss_pred HHHHhCCHHH--HHHHHHHHHHHh
Confidence 9999999955 567777777654
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=357.95 Aligned_cols=360 Identities=18% Similarity=0.270 Sum_probs=263.1
Q ss_pred CCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCCCeEEEEeccCCCcccccc
Q 003987 299 PDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRQ 378 (781)
Q Consensus 299 p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~~~~I~rvp~~~~~~~~~~ 378 (781)
|..||.+.++. +|++.|+++||+|+ |+|...+.... ...+++.+..++.....
T Consensus 24 p~~GG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~~----------~~~~~i~~~~~~~~~~~----- 76 (394)
T 2jjm_A 24 PSVGGSGVVGT--------ELGKQLAERGHEIH----FITSGLPFRLN----------KVYPNIYFHEVTVNQYS----- 76 (394)
T ss_dssp C--CHHHHHHH--------HHHHHHHHTTCEEE----EECSSCC--------------CCCTTEEEECCCCC--------
T ss_pred CCCCCHHHHHH--------HHHHHHHhCCCEEE----EEeCCCCCccc----------ccCCceEEEeccccccc-----
Confidence 56899999999 77777899999999 99875332110 11224566555443211
Q ss_pred cccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCch-HHHHHHHHHc--CCcEEEEecCCcccCCCCChhhHhhh
Q 003987 379 WISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGN-LVASLLAYKM--GITQCTIAHALEKTKYPDSDIYWKKF 455 (781)
Q Consensus 379 ~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~-lva~llar~~--gvp~v~t~H~l~~~k~~~s~~~~k~~ 455 (781)
.+...++...+...+.+.+.+. +||+||+|+..+. +.+.++++.. ++|+|++.|+........
T Consensus 77 ---~~~~~~~~~~~~~~l~~~l~~~---~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~-------- 142 (394)
T 2jjm_A 77 ---VFQYPPYDLALASKMAEVAQRE---NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITVLGS-------- 142 (394)
T ss_dssp ----CCSCCHHHHHHHHHHHHHHHH---TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHTTTT--------
T ss_pred ---ccccccccHHHHHHHHHHHHHc---CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccccCC--------
Confidence 0111112223334445555554 8999999987654 3444444444 599999999853211110
Q ss_pred hccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCC
Q 003987 456 DEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFP 535 (781)
Q Consensus 456 ~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p 535 (781)
...+. ......++.+|.||++|....+...+. .+. ..++.+||||+|.+.|.+
T Consensus 143 ~~~~~-----~~~~~~~~~ad~ii~~s~~~~~~~~~~-------------------~~~---~~~~~vi~ngv~~~~~~~ 195 (394)
T 2jjm_A 143 DPSLN-----NLIRFGIEQSDVVTAVSHSLINETHEL-------------------VKP---NKDIQTVYNFIDERVYFK 195 (394)
T ss_dssp CTTTH-----HHHHHHHHHSSEEEESCHHHHHHHHHH-------------------TCC---SSCEEECCCCCCTTTCCC
T ss_pred CHHHH-----HHHHHHHhhCCEEEECCHHHHHHHHHh-------------------hCC---cccEEEecCCccHHhcCC
Confidence 00111 124457889999999998876532211 011 468999999999998877
Q ss_pred CcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCC
Q 003987 536 YSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDV 615 (781)
Q Consensus 536 ~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~ 615 (781)
......+ +.+|+ ++++++|+++||+.+.||++.+++|++++.+. ++++|+|+|+|+.
T Consensus 196 ~~~~~~~-------------------~~~~~--~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~- 252 (394)
T 2jjm_A 196 RDMTQLK-------------------KEYGI--SESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKLLLVGDGPE- 252 (394)
T ss_dssp CCCHHHH-------------------HHTTC--C---CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEEEEECCCTT-
T ss_pred cchHHHH-------------------HHcCC--CCCCeEEEEeeccccccCHHHHHHHHHHHHhh-CCCEEEEECCchH-
Confidence 5432221 23555 46778999999999999999999999999766 5699999999976
Q ss_pred CCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 616 NKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 616 ~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
.+.++++++++++.++|.|+|. .+++..+|+. +|++|+||.+|+||++++|||+||+|||+|
T Consensus 253 -----------~~~l~~~~~~~~l~~~v~~~g~------~~~~~~~~~~-adv~v~ps~~e~~~~~~~EAma~G~PvI~~ 314 (394)
T 2jjm_A 253 -----------FCTILQLVKNLHIEDRVLFLGK------QDNVAELLAM-SDLMLLLSEKESFGLVLLEAMACGVPCIGT 314 (394)
T ss_dssp -----------HHHHHHHHHTTTCGGGBCCCBS------CSCTHHHHHT-CSEEEECCSCCSCCHHHHHHHHTTCCEEEE
T ss_pred -----------HHHHHHHHHHcCCCCeEEEeCc------hhhHHHHHHh-CCEEEeccccCCCchHHHHHHhcCCCEEEe
Confidence 6788999999999999999994 2457888885 999999999999999999999999999999
Q ss_pred CccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhcC
Q 003987 696 CHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVIS 773 (781)
Q Consensus 696 ~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~~ 773 (781)
+.||..|++.++.+|++++++|+++++++|.+++ .|++.+++|++++++++.++|||+. +++.|++++..+.
T Consensus 315 ~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~~~s~~~--~~~~~~~~~~~~~ 386 (394)
T 2jjm_A 315 RVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLL----KDEELHRNMGERARESVYEQFRSEK--IVSQYETIYYDVL 386 (394)
T ss_dssp CCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHHSCHHH--HHHHHHHHHHHTC
T ss_pred cCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHHHhCCHHH--HHHHHHHHHHHHH
Confidence 9999999999999999999999999999998887 7999999999999999999999966 4566666666544
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=370.51 Aligned_cols=430 Identities=15% Similarity=0.130 Sum_probs=278.6
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCc----------
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTT---------- 348 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~---------- 348 (781)
|||++++.+.+|. +..||.+.++. +|+++|+++||+|+ |+|...+......
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~~~~~~~~~~~~~ 61 (485)
T 2qzs_A 1 MQVLHVCSEMFPL-------LKTGGLADVIG--------ALPAAQIADGVDAR----VLLPAFPDIRRGVTDAQVVSRRD 61 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHHTTCEEE----EEEECCHHHHHHCTTCEEEEEEC
T ss_pred CeEEEEeeecccc-------ccCCcHHHHHH--------HHHHHHHHcCCEEE----EEecCccccccccccceeEEEec
Confidence 7999999766531 24799999999 77778899999999 9986532110000
Q ss_pred -cCcceeee-cCCCCeEEEEeccCC---Ccc-ccc-----ccccccCchhhHHHHHHHHHHHHHHHc-CCCceEEEEcCC
Q 003987 349 -CNQRLERV-SGTEHTHILRVPFRS---EKG-ILR-----QWISRFDVWPYLETFTEDVGSEITAEL-QGFPDFIIGNYS 416 (781)
Q Consensus 349 -~~~~~e~v-~~~~~~~I~rvp~~~---~~~-~~~-----~~isr~~i~~yl~~f~~~~~~~i~~~~-~~kpDIIh~~~~ 416 (781)
.....+.. ....++.+++++... ..+ ... .|. ..+..+..+...+.+.+.... ..+|||||+|.+
T Consensus 62 ~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~ 138 (485)
T 2qzs_A 62 TFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYT---DNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDW 138 (485)
T ss_dssp CTTCCEEEEEEEETTEEEEEEECHHHHCCSSCSSBCTTSCBCT---THHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETG
T ss_pred ccCCcEEEEEEEECCcEEEEEeChhhccCCCCccCCcccCCCC---chHHHHHHHHHHHHHHHHHhccCCCCCEEEeecc
Confidence 00000000 001367888876421 000 000 000 000011122222222222211 158999999997
Q ss_pred CchHHHHHHH-HHcCCcEEEEecCCcccCCCCCh-h-----hHhhhh-ccccchhhhhHHHHHHhhCCEEEecCHHHHhh
Q 003987 417 DGNLVASLLA-YKMGITQCTIAHALEKTKYPDSD-I-----YWKKFD-EKYHFSCQFTADLIAMNNADFIITSTYQEIAG 488 (781)
Q Consensus 417 ~~~lva~lla-r~~gvp~v~t~H~l~~~k~~~s~-~-----~~k~~~-~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~ 488 (781)
..++++.+++ +..++|+|++.|+.......... + ....+. ....+......+..+++.+|.||++|....+.
T Consensus 139 ~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~ 218 (485)
T 2qzs_A 139 HAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYARE 218 (485)
T ss_dssp GGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEEESSHHHHHH
T ss_pred chhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEEecCHHHHHH
Confidence 7777777777 67899999999997532210000 0 000000 00001111234567889999999999887653
Q ss_pred ccccccccccccccccccceeeeccCCC------CC--CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCcccc
Q 003987 489 TKNTVGQYESHTAFTLPGLYRVVHGIDV------FD--PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQN 560 (781)
Q Consensus 489 ~k~~v~qyes~~~f~l~~ly~v~~gi~~------f~--~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~ 560 (781)
+.+. ..|++. .. .++.+||||+|.+.|.|.........-....++.........
T Consensus 219 ~~~~------------------~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (485)
T 2qzs_A 219 ITEP------------------QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQL 280 (485)
T ss_dssp TTSH------------------HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHH
T ss_pred Hhcc------------------ccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHH
Confidence 2211 002110 12 689999999999988775321000000000000000000112
Q ss_pred ccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003987 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~ 640 (781)
++++|+..++++++|+++||+.+.||++.+++|++++.+ ++++|+|+|+|+. .+.+.+++++++++
T Consensus 281 r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~----------~~~~~l~~~~~~~~-- 346 (485)
T 2qzs_A 281 QIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGGQLALLGAGDP----------VLQEGFLAAAAEYP-- 346 (485)
T ss_dssp HHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTCEEEEEEEECH----------HHHHHHHHHHHHST--
T ss_pred HHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CCcEEEEEeCCch----------HHHHHHHHHHHhCC--
Confidence 245676433478999999999999999999999999976 4899999999864 34678888898886
Q ss_pred CcEE-EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------CeE
Q 003987 641 GQFR-WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG---------ASG 710 (781)
Q Consensus 641 ~~V~-flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg---------~~G 710 (781)
++|. |.|+ +.+++..+|+. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ .+|
T Consensus 347 ~~v~~~~g~-----~~~~~~~~~~~-adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G 420 (485)
T 2qzs_A 347 GQVGVQIGY-----HEAFSHRIMGG-ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASG 420 (485)
T ss_dssp TTEEEEESC-----CHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCB
T ss_pred CcEEEeCCC-----CHHHHHHHHHh-CCEEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccce
Confidence 6786 7873 45677899995 999999999999999999999999999999999999999998 899
Q ss_pred EEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhcCC
Q 003987 711 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVISM 774 (781)
Q Consensus 711 ~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~~~ 774 (781)
++++++|+++++++|.++++ +..|++.+++|++++++ ++|||+. +++.|.+++..+..
T Consensus 421 ~l~~~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~---~~fs~~~--~~~~~~~ly~~~~~ 478 (485)
T 2qzs_A 421 FVFEDSNAWSLLRAIRRAFV-LWSRPSLWRFVQRQAMA---MDFSWQV--AAKSYRELYYRLKL 478 (485)
T ss_dssp EEECSSSHHHHHHHHHHHHH-HHTSHHHHHHHHHHHHH---CCCCHHH--HHHHHHHHHHHHC-
T ss_pred EEECCCCHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHh---hcCCHHH--HHHHHHHHHHHhhh
Confidence 99999999999999988762 22589999999999874 7999966 45666666665433
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-40 Score=371.41 Aligned_cols=433 Identities=15% Similarity=0.159 Sum_probs=277.9
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCc-------
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQ------- 351 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~------- 351 (781)
|||++++.+.+|. +..||.+.++. +|+++|+++||+|+ |+|...+.... .+..
T Consensus 1 MkIl~v~~~~~P~-------~~~GG~~~~~~--------~la~~L~~~G~~V~----vi~~~~~~~~~-~~~~~~~~~~~ 60 (485)
T 1rzu_A 1 MNVLSVSSEIYPL-------IKTGGLADVVG--------ALPIALEAHGVRTR----TLIPGYPAVKA-AVTDPVKCFEF 60 (485)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCHHHHH-HCCSCEEEEEE
T ss_pred CeEEEEeeeeccc-------cccccHHHHHH--------HHHHHHHHcCCeEE----EEecccccccc-cccccceeEEE
Confidence 7999999876641 24799999999 77778899999999 99865322100 0000
Q ss_pred ------ceeee-cCCCCeEEEEeccCCC---c-cccc-----ccccccCchhhHHHHHHHHHHHHHHH-cCCCceEEEEc
Q 003987 352 ------RLERV-SGTEHTHILRVPFRSE---K-GILR-----QWISRFDVWPYLETFTEDVGSEITAE-LQGFPDFIIGN 414 (781)
Q Consensus 352 ------~~e~v-~~~~~~~I~rvp~~~~---~-~~~~-----~~isr~~i~~yl~~f~~~~~~~i~~~-~~~kpDIIh~~ 414 (781)
..... ....++.+++++.... . +... .|. .....+..+...+.+.+... ...+|||||+|
T Consensus 61 ~~~~~~~~~~~~~~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~ 137 (485)
T 1rzu_A 61 TDLLGEKADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYP---DNWKRFAALSLAAARIGAGVLPGWRPDMVHAH 137 (485)
T ss_dssp SCSSSCCEEEEEEEETTEEEEEEECHHHHCSSSCSSBCTTSSBCT---THHHHHHHHHHHHHHHHTTCSSSCCCSEEEEE
T ss_pred EEecCCeEEEEEEEecCceEEEEeChHHhCCCccccCCccccccc---chHHHHHHHHHHHHHHHHHhccCCCCCEEEec
Confidence 00000 0123688888764310 0 0000 000 00001112222233322221 14689999999
Q ss_pred CCCchHHHHHHHHH--cCCcEEEEecCCcccCCCCC-hh-----hHhhhh-ccccchhhhhHHHHHHhhCCEEEecCHHH
Q 003987 415 YSDGNLVASLLAYK--MGITQCTIAHALEKTKYPDS-DI-----YWKKFD-EKYHFSCQFTADLIAMNNADFIITSTYQE 485 (781)
Q Consensus 415 ~~~~~lva~llar~--~gvp~v~t~H~l~~~k~~~s-~~-----~~k~~~-~~y~f~~~~~~e~~a~~~AD~IIt~S~~~ 485 (781)
.+..++++.++++. .++|+|++.|+......... .+ .+..+. ....+......+..+++.||.||++|...
T Consensus 138 ~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~ 217 (485)
T 1rzu_A 138 DWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSY 217 (485)
T ss_dssp HHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHH
T ss_pred ccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEEEecCHhH
Confidence 87666677777765 89999999999754321100 00 000000 00011111134567889999999999987
Q ss_pred HhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccC
Q 003987 486 IAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVG 565 (781)
Q Consensus 486 ~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g 565 (781)
.+.+.+.. | ++.++.+ +.....++.+||||+|.+.|.|...............+.........++++|
T Consensus 218 ~~~~~~~~--~----g~~~~~~------~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 285 (485)
T 1rzu_A 218 AEEILTAE--F----GMGLEGV------IGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFR 285 (485)
T ss_dssp HHHTTSHH--H----HTTCHHH------HHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHT
T ss_pred HHHHhccc--c----CcchHHH------HHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcC
Confidence 65322110 0 0000000 0012569999999999998877542100000000000000000001124467
Q ss_pred CCCCCC-CCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003987 566 TLSDRS-KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 566 ~l~~~~-k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~ 644 (781)
+ +++ +++|+++||+.+.||++.|++|++++.+ ++++|+|+|+|+. .+.+.+++++++++ ++|.
T Consensus 286 ~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~~----------~~~~~l~~~~~~~~--~~v~ 349 (485)
T 1rzu_A 286 I--DDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGGRLVVLGAGDV----------ALEGALLAAASRHH--GRVG 349 (485)
T ss_dssp C--CCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTCEEEEEECBCH----------HHHHHHHHHHHHTT--TTEE
T ss_pred C--CCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cCceEEEEeCCch----------HHHHHHHHHHHhCC--CcEE
Confidence 6 332 6799999999999999999999999876 4899999999864 34678888898885 6787
Q ss_pred -EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccC---------CeEEEEC
Q 003987 645 -WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHG---------ASGFHID 714 (781)
Q Consensus 645 -flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg---------~~G~lv~ 714 (781)
|.|+ +.+++..+++. +|++|+||.+|+||++++|||+||+|||+|+.||..|++.++ .+|++++
T Consensus 350 ~~~g~-----~~~~~~~~~~~-adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~ 423 (485)
T 1rzu_A 350 VAIGY-----NEPLSHLMQAG-CDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFS 423 (485)
T ss_dssp EEESC-----CHHHHHHHHHH-CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEES
T ss_pred EecCC-----CHHHHHHHHhc-CCEEEECcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeC
Confidence 7873 45677899995 999999999999999999999999999999999999999998 8999999
Q ss_pred CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhcCC
Q 003987 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVISM 774 (781)
Q Consensus 715 p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~~~ 774 (781)
++|+++++++|.+++. +..|++.+++|++++++ ++|||+.+ ++.|.+++..+..
T Consensus 424 ~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~~~---~~fs~~~~--~~~~~~~y~~~~~ 477 (485)
T 1rzu_A 424 PVTLDGLKQAIRRTVR-YYHDPKLWTQMQKLGMK---SDVSWEKS--AGLYAALYSQLIS 477 (485)
T ss_dssp SCSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHT---CCCBHHHH--HHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHH---HhCChHHH--HHHHHHHHHHhhC
Confidence 9999999999988762 22589999999999874 78999664 4566666655433
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=352.15 Aligned_cols=366 Identities=15% Similarity=0.206 Sum_probs=258.5
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~ 358 (781)
|||++++++.. | .||.+.++. +|++.|+++||+|+ |+|.......
T Consensus 1 MkIl~i~~~~~---------~-~gG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~------------- 45 (374)
T 2iw1_A 1 MIVAFCLYKYF---------P-FGGLQRDFM--------RIASTVAARGHHVR----VYTQSWEGDC------------- 45 (374)
T ss_dssp -CEEEECSEEC---------T-TCHHHHHHH--------HHHHHHHHTTCCEE----EEESEECSCC-------------
T ss_pred CeEEEEEeecC---------C-CcchhhHHH--------HHHHHHHhCCCeEE----EEecCCCCCC-------------
Confidence 79999997543 2 589999999 77778899999999 9987632210
Q ss_pred CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEec
Q 003987 359 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAH 438 (781)
Q Consensus 359 ~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H 438 (781)
.+++++.++|...... ......+...+.+.+.+ .+||+||+|....+..+...++..+++.+.+.|
T Consensus 46 ~~~~~v~~~~~~~~~~-----------~~~~~~~~~~l~~~i~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (374)
T 2iw1_A 46 PKAFELIQVPVKSHTN-----------HGRNAEYYAWVQNHLKE---HPADRVVGFNKMPGLDVYFAADVCYAEKVAQEK 111 (374)
T ss_dssp CTTCEEEECCCCCSSH-----------HHHHHHHHHHHHHHHHH---SCCSEEEESSCCTTCSEEECCSCCHHHHHHHHC
T ss_pred CCCcEEEEEccCcccc-----------hhhHHHHHHHHHHHHhc---cCCCEEEEecCCCCceeeeccccccceeeeecc
Confidence 1257888887654211 11122333344444444 389999998865432111111111122222223
Q ss_pred CCcccCCCCChhhHhhhhccccchhhhhHHHHHHh--hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003987 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN--NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (781)
Q Consensus 439 ~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~--~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~ 516 (781)
+... .....+.+.. ..+...+. .+|.|+++|....+...+. .|++
T Consensus 112 ~~~~-----------~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~~~-------------------~~~~- 158 (374)
T 2iw1_A 112 GFLY-----------RLTSRYRHYA--AFERATFEQGKSTKLMMLTDKQIADFQKH-------------------YQTE- 158 (374)
T ss_dssp CHHH-----------HTSHHHHHHH--HHHHHHHSTTCCCEEEESCHHHHHHHHHH-------------------HCCC-
T ss_pred cchh-----------hhcHHHHHHH--HHHHHHhhccCCcEEEEcCHHHHHHHHHH-------------------hCCC-
Confidence 2100 0001111111 12233343 6999999998876532211 1333
Q ss_pred CCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHH
Q 003987 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK 596 (781)
Q Consensus 517 f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~ 596 (781)
..++.+||||+|.+.|.+......+. ..++.+|+ ++++++|+++||+.+.||++.+++|+..
T Consensus 159 -~~~~~vi~ngv~~~~~~~~~~~~~~~---------------~~~~~~~~--~~~~~~i~~~G~~~~~K~~~~li~a~~~ 220 (374)
T 2iw1_A 159 -PERFQILPPGIYPDRKYSEQIPNSRE---------------IYRQKNGI--KEQQNLLLQVGSDFGRKGVDRSIEALAS 220 (374)
T ss_dssp -GGGEEECCCCCCGGGSGGGSCTTHHH---------------HHHHHTTC--CTTCEEEEEECSCTTTTTHHHHHHHHHT
T ss_pred -hhheEEecCCcCHHhcCcccchhHHH---------------HHHHHhCC--CCCCeEEEEeccchhhcCHHHHHHHHHH
Confidence 56899999999998886643211110 11234666 5677899999999999999999999999
Q ss_pred hhcc-CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCC
Q 003987 597 NSQL-RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFY 675 (781)
Q Consensus 597 l~~~-~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~ 675 (781)
+.+. .++++|+|+|+|+. +.++++++++++.++|+|+|++ +++..+++. +|++|+||.+
T Consensus 221 l~~~~~~~~~l~i~G~g~~-------------~~~~~~~~~~~~~~~v~~~g~~------~~~~~~~~~-ad~~v~ps~~ 280 (374)
T 2iw1_A 221 LPESLRHNTLLFVVGQDKP-------------RKFEALAEKLGVRSNVHFFSGR------NDVSELMAA-ADLLLHPAYQ 280 (374)
T ss_dssp SCHHHHHTEEEEEESSSCC-------------HHHHHHHHHHTCGGGEEEESCC------SCHHHHHHH-CSEEEECCSC
T ss_pred hHhccCCceEEEEEcCCCH-------------HHHHHHHHHcCCCCcEEECCCc------ccHHHHHHh-cCEEEecccc
Confidence 8765 57899999999854 4678889999999999999942 468888985 9999999999
Q ss_pred CCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEEC-CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003987 676 EAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHID-PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 676 E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~-p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~y 754 (781)
|+||++++|||+||+|||+|+.||..|++.++.+|++++ |+|+++++++|.+++ +|++.++++++++++.+. +|
T Consensus 281 e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~-~~ 355 (374)
T 2iw1_A 281 EAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKAL----TQSPLRMAWAENARHYAD-TQ 355 (374)
T ss_dssp CSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHH-HS
T ss_pred CCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEeCCCCCHHHHHHHHHHHH----cChHHHHHHHHHHHHHHH-Hh
Confidence 999999999999999999999999999999999999998 899999999998887 799999999999999995 67
Q ss_pred CcchhhhccchHHHHHh
Q 003987 755 VVSSDGIVDPSPFVINV 771 (781)
Q Consensus 755 sw~~~~il~~ye~ll~~ 771 (781)
+|.. +.+.+.+++..
T Consensus 356 ~~~~--~~~~~~~~l~~ 370 (374)
T 2iw1_A 356 DLYS--LPEKAADIITG 370 (374)
T ss_dssp CCSC--HHHHHHHHHHC
T ss_pred hHHH--HHHHHHHHHHH
Confidence 9955 44566666643
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=350.84 Aligned_cols=362 Identities=14% Similarity=0.146 Sum_probs=261.4
Q ss_pred CCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceee
Q 003987 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLER 355 (781)
Q Consensus 276 p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~ 355 (781)
.++|||+++++... |..||.+.++. .+++.|.++||+|+ ++|......... ....
T Consensus 18 ~~~MkIl~i~~~~~---------~~~gG~~~~~~--------~l~~~L~~~G~~V~----v~~~~~~~~~~~----~~~~ 72 (406)
T 2gek_A 18 GSHMRIGMVCPYSF---------DVPGGVQSHVL--------QLAEVLRDAGHEVS----VLAPASPHVKLP----DYVV 72 (406)
T ss_dssp ---CEEEEECSSCT---------TSCCHHHHHHH--------HHHHHHHHTTCEEE----EEESCCTTSCCC----TTEE
T ss_pred CCcceEEEEeccCC---------CCCCcHHHHHH--------HHHHHHHHCCCeEE----EEecCCccccCC----cccc
Confidence 44689999995432 34689999999 77778899999999 998774432101 1111
Q ss_pred ecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEE
Q 003987 356 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT 435 (781)
Q Consensus 356 v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~ 435 (781)
.. + +++++|+... ..+... ...+...+.+.+.+. +||+||+|.......+.++++..++|+++
T Consensus 73 ~~---~-~~~~~~~~~~-------~~~~~~---~~~~~~~l~~~l~~~---~~Dii~~~~~~~~~~~~~~~~~~~~~~i~ 135 (406)
T 2gek_A 73 SG---G-KAVPIPYNGS-------VARLRF---GPATHRKVKKWIAEG---DFDVLHIHEPNAPSLSMLALQAAEGPIVA 135 (406)
T ss_dssp EC---C-CCC-------------------C---CHHHHHHHHHHHHHH---CCSEEEEECCCSSSHHHHHHHHEESSEEE
T ss_pred cC---C-cEEeccccCC-------cccccc---cHHHHHHHHHHHHhc---CCCEEEECCccchHHHHHHHHhcCCCEEE
Confidence 11 1 3444444321 001111 111223344445444 89999999987755577788888999999
Q ss_pred EecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCC
Q 003987 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (781)
Q Consensus 436 t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~ 515 (781)
+.|+..... ..++.+ +++ .+ ..++.+|.++++|....+...+ +++
T Consensus 136 ~~h~~~~~~-----~~~~~~---~~~-----~~-~~~~~~d~ii~~s~~~~~~~~~---------------------~~~ 180 (406)
T 2gek_A 136 TFHTSTTKS-----LTLSVF---QGI-----LR-PYHEKIIGRIAVSDLARRWQME---------------------ALG 180 (406)
T ss_dssp EECCCCCSH-----HHHHHH---HST-----TH-HHHTTCSEEEESSHHHHHHHHH---------------------HHS
T ss_pred EEcCcchhh-----hhHHHH---HHH-----HH-HHHhhCCEEEECCHHHHHHHHH---------------------hcC
Confidence 999853321 111111 111 11 5788999999999877552211 112
Q ss_pred CCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeec-cCCCChHHHHHHH
Q 003987 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL-DHVKNMTGLVECY 594 (781)
Q Consensus 516 ~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL-~~~Kgl~~LieA~ 594 (781)
..++ +||||+|.+.|.+.... .++ +.++++|+++||+ .+.||++.+++|+
T Consensus 181 --~~~~-vi~~~v~~~~~~~~~~~------------------------~~~--~~~~~~i~~~G~~~~~~Kg~~~li~a~ 231 (406)
T 2gek_A 181 --SDAV-EIPNGVDVASFADAPLL------------------------DGY--PREGRTVLFLGRYDEPRKGMAVLLAAL 231 (406)
T ss_dssp --SCEE-ECCCCBCHHHHHTCCCC------------------------TTC--SCSSCEEEEESCTTSGGGCHHHHHHHH
T ss_pred --CCcE-EecCCCChhhcCCCchh------------------------hhc--cCCCeEEEEEeeeCccccCHHHHHHHH
Confidence 4578 99999998655443210 112 2356899999999 9999999999999
Q ss_pred HHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC
Q 003987 595 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (781)
Q Consensus 595 ~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 674 (781)
.++.+..++++|+|+|+++. +.++++++++ .++|.|+| .++..++..+|+. +|++|+||.
T Consensus 232 ~~l~~~~~~~~l~i~G~~~~-------------~~l~~~~~~~--~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~ 291 (406)
T 2gek_A 232 PKLVARFPDVEILIVGRGDE-------------DELREQAGDL--AGHLRFLG----QVDDATKASAMRS-ADVYCAPHL 291 (406)
T ss_dssp HHHHTTSTTCEEEEESCSCH-------------HHHHHHTGGG--GGGEEECC----SCCHHHHHHHHHH-SSEEEECCC
T ss_pred HHHHHHCCCeEEEEEcCCcH-------------HHHHHHHHhc--cCcEEEEe----cCCHHHHHHHHHH-CCEEEecCC
Confidence 99988888999999999842 4667777766 68899999 6777899999995 999999996
Q ss_pred -CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh
Q 003987 675 -YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYER 753 (781)
Q Consensus 675 -~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ 753 (781)
.|+||++++|||+||+|||+|+.||..|++.++.+|++++++|+++++++|.+++ .|++.++++++++++.+. +
T Consensus 292 ~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~----~~~~~~~~~~~~~~~~~~-~ 366 (406)
T 2gek_A 292 GGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGIL----EDDQLRAGYVARASERVH-R 366 (406)
T ss_dssp SCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHGG-G
T ss_pred CCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHHH-h
Confidence 9999999999999999999999999999999999999999999999999998887 799999999999999997 9
Q ss_pred cCcchhhhccchHHHHH
Q 003987 754 LVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 754 ysw~~~~il~~ye~ll~ 770 (781)
|+|+.. ++.|.+++.
T Consensus 367 ~s~~~~--~~~~~~~~~ 381 (406)
T 2gek_A 367 YDWSVV--SAQIMRVYE 381 (406)
T ss_dssp GBHHHH--HHHHHHHHH
T ss_pred CCHHHH--HHHHHHHHH
Confidence 999765 344555544
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-38 Score=348.66 Aligned_cols=371 Identities=15% Similarity=0.172 Sum_probs=258.9
Q ss_pred ceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeec
Q 003987 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (781)
Q Consensus 278 ~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~ 357 (781)
.|||++++++. ..||.+.++. .|++.|.++||+|+ |++...+.. .......+.
T Consensus 40 ~mkIl~v~~~~-----------~~GG~~~~~~--------~l~~~L~~~G~~v~----v~~~~~~~~----~~~~~~~~~ 92 (416)
T 2x6q_A 40 GRSFVHVNSTS-----------FGGGVAEILH--------SLVPLLRSIGIEAR----WFVIEGPTE----FFNVTKTFH 92 (416)
T ss_dssp TCEEEEEESCS-----------SSSTHHHHHH--------HHHHHHHHTTCEEE----EEECCCCHH----HHHHHHHHH
T ss_pred ccEEEEEeCCC-----------CCCCHHHHHH--------HHHHHHHhCCCeEE----EEEccCCcc----hhhhhcccc
Confidence 48999998652 3689999999 77777899999999 887542210 000000000
Q ss_pred C-CCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEE
Q 003987 358 G-TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 436 (781)
Q Consensus 358 ~-~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t 436 (781)
. ..+...++ ++. ..+.....+...+.+.+. ..+||+||+|.+.....+.++++ ++|+|++
T Consensus 93 ~~~~~~~~~~-------------~~~-~~~~~~~~~~~~~~~~l~---~~~~Dvv~~~~~~~~~~~~~~~~--~~p~v~~ 153 (416)
T 2x6q_A 93 NALQGNESLK-------------LTE-EMKELYLNVNRENSKFID---LSSFDYVLVHDPQPAALIEFYEK--KSPWLWR 153 (416)
T ss_dssp HHHTTCCSCC-------------CCH-HHHHHHHHHHHHHHHSSC---GGGSSEEEEESSTTGGGGGGSCC--CSCEEEE
T ss_pred eeeccccccc-------------ccH-HHHHHHHHHHHHHHHHHh---hcCCCEEEEeccchhhHHHHHHh--cCCEEEE
Confidence 0 00000000 000 001111111111222221 23899999998876444443332 3899999
Q ss_pred ecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003987 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (781)
Q Consensus 437 ~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~ 516 (781)
.|+..... ....|+. ....+..+|.+|+++..... + ++.
T Consensus 154 ~h~~~~~~---~~~~~~~-------------~~~~~~~~~~~i~~~s~~~~---~---------------------~~~- 192 (416)
T 2x6q_A 154 CHIDLSSP---NREFWEF-------------LRRFVEKYDRYIFHLPEYVQ---P---------------------ELD- 192 (416)
T ss_dssp CCSCCSSC---CHHHHHH-------------HHHHHTTSSEEEESSGGGSC---T---------------------TSC-
T ss_pred EccccCCc---cHHHHHH-------------HHHHHHhCCEEEEechHHHH---h---------------------hCC-
Confidence 99854321 1112211 11345677877644432211 0 111
Q ss_pred CCCceEEecCCCcCCCCCCCc--HHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHH
Q 003987 517 FDPKFNIVSPGADMDIYFPYS--EKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECY 594 (781)
Q Consensus 517 f~~k~~VIpnGvD~~~f~p~~--~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~ 594 (781)
..++.+||||+|...+.+.. ..... ..++.+|+ ++++++|+++||+.+.||++.+++|+
T Consensus 193 -~~~~~vi~ngvd~~~~~~~~~~~~~~~----------------~~r~~~~~--~~~~~~i~~vGrl~~~Kg~~~li~a~ 253 (416)
T 2x6q_A 193 -RNKAVIMPPSIDPLSEKNVELKQTEIL----------------RILERFDV--DPEKPIITQVSRFDPWKGIFDVIEIY 253 (416)
T ss_dssp -TTTEEECCCCBCTTSTTTSCCCHHHHH----------------HHHHHTTC--CTTSCEEEEECCCCTTSCHHHHHHHH
T ss_pred -ccceEEeCCCCChhhhcccccChhhHH----------------HHHHHhCC--CCCCcEEEEEeccccccCHHHHHHHH
Confidence 46899999999987765422 11110 11234666 56788999999999999999999999
Q ss_pred HHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC
Q 003987 595 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (781)
Q Consensus 595 ~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 674 (781)
+.+.+..|+++|+|+|+|+.. ..+..+.++++++++++.++|+|+|+.. ..+.+++..+++. +|++|+||.
T Consensus 254 ~~l~~~~~~~~l~i~G~g~~~-------~~~~~~~l~~~~~~~~~~~~V~~~G~~~-~~~~~~~~~~~~~-ad~~v~ps~ 324 (416)
T 2x6q_A 254 RKVKEKIPGVQLLLVGVMAHD-------DPEGWIYFEKTLRKIGEDYDVKVLTNLI-GVHAREVNAFQRA-SDVILQMSI 324 (416)
T ss_dssp HHHHHHCTTCEEEEEECCCTT-------CHHHHHHHHHHHHHHTTCTTEEEEEGGG-TCCHHHHHHHHHH-CSEEEECCS
T ss_pred HHHHHhCCCeEEEEEecCccc-------chhHHHHHHHHHHHhCCCCcEEEecccC-CCCHHHHHHHHHh-CCEEEECCC
Confidence 999888889999999999751 1123567888899999999999999655 3557799999995 999999999
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhc
Q 003987 675 YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERL 754 (781)
Q Consensus 675 ~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~y 754 (781)
+|+||++++|||+||+|||+|+.||..|++.++.+|++++ |+++++++|.+++ .|++.+++++++|++++.++|
T Consensus 325 ~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~~~f 398 (416)
T 2x6q_A 325 REGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLL----KHPEVSKEMGAKAKERVRKNF 398 (416)
T ss_dssp SCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEEC--CHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999997 9999999998887 799999999999999999999
Q ss_pred CcchhhhccchHHHHHh
Q 003987 755 VVSSDGIVDPSPFVINV 771 (781)
Q Consensus 755 sw~~~~il~~ye~ll~~ 771 (781)
||+. +++.|.+++..
T Consensus 399 s~~~--~~~~~~~~~~~ 413 (416)
T 2x6q_A 399 IITK--HMERYLDILNS 413 (416)
T ss_dssp BHHH--HHHHHHHHHHT
T ss_pred CHHH--HHHHHHHHHHH
Confidence 9965 55667776654
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=346.12 Aligned_cols=358 Identities=13% Similarity=0.095 Sum_probs=258.0
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecC
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSG 358 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~ 358 (781)
|||++++++. |..||.+.++. +|+++|+++ |+|+ |+|.... +.....
T Consensus 1 MkI~~v~~~~----------p~~gG~~~~~~--------~l~~~L~~~-~~V~----v~~~~~~---g~~~~~------- 47 (413)
T 3oy2_A 1 MKLIIVGAHS----------SVPSGYGRVMR--------AIVPRISKA-HEVI----VFGIHAF---GRSVHA------- 47 (413)
T ss_dssp CEEEEEEECT----------TCCSHHHHHHH--------HHHHHHTTT-SEEE----EEEESCC---SCCSCS-------
T ss_pred CeEEEecCCC----------CCCCCHHHHHH--------HHHHHHHhc-CCeE----EEeecCC---Cccccc-------
Confidence 8999999753 45699999999 777788999 9999 8875532 100000
Q ss_pred CCCeEEEEeccCCCcccccccccc-cCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCc----E
Q 003987 359 TEHTHILRVPFRSEKGILRQWISR-FDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGIT----Q 433 (781)
Q Consensus 359 ~~~~~I~rvp~~~~~~~~~~~isr-~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp----~ 433 (781)
........... ..+ +++. ...| ..+.+.+... +||+||+|++ ....+.++++..++| .
T Consensus 48 --~~~~~~~~~~~---~~~-~~~~~~~~~-------~~l~~~l~~~---~~Div~~~~~-~~~~~~~~~~~~~~~~~~~~ 110 (413)
T 3oy2_A 48 --NIEEFDAQTAE---HVR-GLNEQGFYY-------SGLSEFIDVH---KPDIVMIYND-PIVIGNYLLAMGKCSHRTKI 110 (413)
T ss_dssp --SSEEEEHHHHH---HHT-TCCSTTCCH-------HHHHHHHHHH---CCSEEEEEEC-HHHHHHHHHHGGGCCSCCEE
T ss_pred --ccccCCccccc---ccc-ccccccchH-------HHHHHHHHhc---CCCEEEEcch-HHHHHHHHHHhccCCCCCce
Confidence 01110100000 000 1110 0111 1223344444 8999999944 445566677776655 3
Q ss_pred EEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCC--EEEecCHHHHhhccccccccccccccccccceeee
Q 003987 434 CTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNAD--FIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVV 511 (781)
Q Consensus 434 v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD--~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~ 511 (781)
+...|...... +.. ....++.+| .+|++|....+.+.+
T Consensus 111 ~~~~~~~~~~~--------~~~------------~~~~~~~~~~~~ii~~S~~~~~~~~~-------------------- 150 (413)
T 3oy2_A 111 VLYVDLVSKNI--------REN------------LWWIFSHPKVVGVMAMSKCWISDICN-------------------- 150 (413)
T ss_dssp EEEECCCSBSC--------CGG------------GGGGGGCTTEEEEEESSTHHHHHHHH--------------------
T ss_pred eeeccccchhh--------HHH------------HHHHHhccCCceEEEcCHHHHHHHHH--------------------
Confidence 44455332211 000 013567888 999999887653221
Q ss_pred ccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHH
Q 003987 512 HGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLV 591 (781)
Q Consensus 512 ~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~Li 591 (781)
.|+ ..++.+||||+|.+.|.. .. +.+|+....++++|+++||+.+.||++.++
T Consensus 151 ~~~---~~~~~vi~ngvd~~~~~~---~~---------------------~~~~~~~~~~~~~il~vGr~~~~Kg~~~li 203 (413)
T 3oy2_A 151 YGC---KVPINIVSHFVDTKTIYD---AR---------------------KLVGLSEYNDDVLFLNMNRNTARKRLDIYV 203 (413)
T ss_dssp TTC---CSCEEECCCCCCCCCCTT---HH---------------------HHTTCGGGTTSEEEECCSCSSGGGTHHHHH
T ss_pred cCC---CCceEEeCCCCCHHHHHH---HH---------------------HhcCCCcccCceEEEEcCCCchhcCcHHHH
Confidence 122 469999999999987711 11 225553223788999999999999999999
Q ss_pred HHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCc-------EEEeccccCcCChHHHHHHHHc
Q 003987 592 ECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQ-------FRWIAAQTNRARNGELYRYIAD 664 (781)
Q Consensus 592 eA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~-------V~flG~~~~~v~~~el~~~la~ 664 (781)
+|++++.+..++++|+|+|+|+.... ....+.++++++++++.++ |.|.| .++.+++..+|+.
T Consensus 204 ~a~~~l~~~~~~~~l~ivG~g~~~~~------~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g----~~~~~~~~~~~~~ 273 (413)
T 3oy2_A 204 LAAARFISKYPDAKVRFLCNSHHESK------FDLHSIALRELVASGVDNVFTHLNKIMINRT----VLTDERVDMMYNA 273 (413)
T ss_dssp HHHHHHHHHCTTCCEEEEEECCTTCS------CCHHHHHHHHHHHHTCSCHHHHHTTEEEECS----CCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcEEEEEeCCcccch------hhHHHHHHHHHHHcCcccccccccceeeccC----cCCHHHHHHHHHh
Confidence 99999988889999999999976110 0123678899999999987 78888 6778999999995
Q ss_pred cCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCe---------------EE--EECCCCHHHHHHHHHH
Q 003987 665 TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGAS---------------GF--HIDPYHPDQAAELMAD 727 (781)
Q Consensus 665 aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~---------------G~--lv~p~d~~~lA~~I~~ 727 (781)
+|++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+ |+ +++++|+++++++| +
T Consensus 274 -adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~ 351 (413)
T 3oy2_A 274 -CDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-T 351 (413)
T ss_dssp -CSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-H
T ss_pred -CCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-H
Confidence 99999999999999999999999999999999999999999888 99 99999999999999 9
Q ss_pred HHHhccCCHHHHHHHHHHHHHHHHHhcCcchh--hhccchHHHH
Q 003987 728 FFGKCKENPSHWKKISDGGLKRIYERLVVSSD--GIVDPSPFVI 769 (781)
Q Consensus 728 ~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~--~il~~ye~ll 769 (781)
++ .|++.+++|++++++++.++|||+.. .+.+.|++++
T Consensus 352 l~----~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 391 (413)
T 3oy2_A 352 FF----KDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLL 391 (413)
T ss_dssp HT----TSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHT
T ss_pred Hh----cCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 88 89999999999999999999999765 4444444444
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=328.72 Aligned_cols=309 Identities=15% Similarity=0.072 Sum_probs=237.5
Q ss_pred eeEEEEccC--------cCCcccccCCCC-CcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCcc
Q 003987 279 FNVVILSPH--------GYFGQANVLGLP-DTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTC 349 (781)
Q Consensus 279 mrI~ivS~h--------~~~~~~~vlg~p-~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~ 349 (781)
|||++++++ .+|- .| ..||.+.++. +|++.|.++||+|+ ++|.......
T Consensus 4 mkIl~v~~~~~~~~~~~~~p~------~p~~~gG~~~~~~--------~l~~~L~~~G~~v~----v~~~~~~~~~---- 61 (342)
T 2iuy_A 4 LKVALVNIPLRVPGSDAWISV------PPQGYGGIQWVVA--------NLMDGLLELGHEVF----LLGAPGSPAG---- 61 (342)
T ss_dssp CEEEEECCCCBCTTSSSBCCS------SCSSSCHHHHHHH--------HHHHHHHHTTCEEE----EESCTTSCCC----
T ss_pred cEEEEEeccccccCccccccc------CcccCChHHHHHH--------HHHHHHHHcCCeEE----EEecCCCCCC----
Confidence 899999987 3211 12 3699999999 77777899999999 8876632211
Q ss_pred CcceeeecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHc
Q 003987 350 NQRLERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKM 429 (781)
Q Consensus 350 ~~~~e~v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~ 429 (781)
..++.+++ .. .+. .+.+.+.+ .+||+||+|.......+ ++..
T Consensus 62 ---------~~~~~~~~--~~--------------~~~-------~l~~~l~~---~~~Dvi~~~~~~~~~~~---~~~~ 103 (342)
T 2iuy_A 62 ---------RPGLTVVP--AG--------------EPE-------EIERWLRT---ADVDVVHDHSGGVIGPA---GLPP 103 (342)
T ss_dssp ---------STTEEECS--CC--------------SHH-------HHHHHHHH---CCCSEEEECSSSSSCST---TCCT
T ss_pred ---------CCcceecc--CC--------------cHH-------HHHHHHHh---cCCCEEEECCchhhHHH---Hhhc
Confidence 01233321 11 010 23333433 38999999997764332 5677
Q ss_pred CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhcccccccccccccccccccee
Q 003987 430 GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYR 509 (781)
Q Consensus 430 gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~ 509 (781)
++| +++.|+..... . .+|.+|++|....+...
T Consensus 104 ~~p-v~~~h~~~~~~---------------~-------------~~d~ii~~S~~~~~~~~------------------- 135 (342)
T 2iuy_A 104 GTA-FISSHHFTTRP---------------V-------------NPVGCTYSSRAQRAHCG------------------- 135 (342)
T ss_dssp TCE-EEEEECSSSBC---------------S-------------CCTTEEESCHHHHHHTT-------------------
T ss_pred CCC-EEEecCCCCCc---------------c-------------cceEEEEcCHHHHHHHh-------------------
Confidence 999 99999864421 0 18999999987765211
Q ss_pred eeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHH
Q 003987 510 VVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTG 589 (781)
Q Consensus 510 v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~ 589 (781)
. ..++.+||||+|.+.|.+... . .+++++|+++||+.+.||++.
T Consensus 136 -----~--~~~~~vi~ngvd~~~~~~~~~--------------------------~---~~~~~~i~~vG~~~~~Kg~~~ 179 (342)
T 2iuy_A 136 -----G--GDDAPVIPIPVDPARYRSAAD--------------------------Q---VAKEDFLLFMGRVSPHKGALE 179 (342)
T ss_dssp -----C--CTTSCBCCCCBCGGGSCCSTT--------------------------C---CCCCSCEEEESCCCGGGTHHH
T ss_pred -----c--CCceEEEcCCCChhhcCcccc--------------------------c---CCCCCEEEEEeccccccCHHH
Confidence 1 458889999999987766431 0 234568999999999999999
Q ss_pred HHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEE
Q 003987 590 LVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAF 669 (781)
Q Consensus 590 LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvf 669 (781)
+++|++++ +++|+|+|+|+. .+.+++++++++ ++|+|+| .++..++..+++. +|++
T Consensus 180 li~a~~~~-----~~~l~i~G~g~~------------~~~l~~~~~~~~--~~v~~~g----~~~~~~l~~~~~~-adv~ 235 (342)
T 2iuy_A 180 AAAFAHAC-----GRRLVLAGPAWE------------PEYFDEITRRYG--STVEPIG----EVGGERRLDLLAS-AHAV 235 (342)
T ss_dssp HHHHHHHH-----TCCEEEESCCCC------------HHHHHHHHHHHT--TTEEECC----CCCHHHHHHHHHH-CSEE
T ss_pred HHHHHHhc-----CcEEEEEeCccc------------HHHHHHHHHHhC--CCEEEec----cCCHHHHHHHHHh-CCEE
Confidence 99999987 689999999976 567788888887 7899999 6778899999995 9999
Q ss_pred EEcCC----------CCCCcHHHHHHHHcCCcEEEcCcccccccccc--CCeEEEECCCCHHHHHHHHHHHHHhccCCHH
Q 003987 670 VQPAF----------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--GASGFHIDPYHPDQAAELMADFFGKCKENPS 737 (781)
Q Consensus 670 V~PS~----------~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d--g~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~ 737 (781)
|+||. .|+||++++|||+||+|||+|+.||..|++.+ +.+|+++++ |+++++++|.+++ +
T Consensus 236 v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l~----~--- 307 (342)
T 2iuy_A 236 LAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAGLP----A--- 307 (342)
T ss_dssp EECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHTSC----C---
T ss_pred EECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHHHH----H---
Confidence 99999 89999999999999999999999999999999 999999999 9999999997765 3
Q ss_pred HHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 738 HWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 738 ~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
++++++++.++|||+.. ++.|.+++.
T Consensus 308 -----~~~~~~~~~~~~s~~~~--~~~~~~~~~ 333 (342)
T 2iuy_A 308 -----SDEVRRAAVRLWGHVTI--AERYVEQYR 333 (342)
T ss_dssp -----HHHHHHHHHHHHBHHHH--HHHHHHHHH
T ss_pred -----HHHHHHHHHHhcCHHHH--HHHHHHHHH
Confidence 77889999999999765 344444444
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-33 Score=312.73 Aligned_cols=353 Identities=10% Similarity=0.007 Sum_probs=229.2
Q ss_pred CCceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceee
Q 003987 276 PMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLER 355 (781)
Q Consensus 276 p~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~ 355 (781)
+..|||++++++..|+ ...||.. .+. +|+++|+++||+|+ |+|+..... ......
T Consensus 44 ~~~mrI~~v~~~~~p~-------~~~GG~~-~v~--------~la~~L~~~GheV~----Vvt~~~~~~-----~~~~~~ 98 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQE-------HMFGGIS-TAL--------KLFEQFDNKKFKKR----IILTDATPN-----PKDLQS 98 (413)
T ss_dssp CCSCEEEEEESCCCGG-------GCSHHHH-HHH--------HHHTTSCTTTCEEE----EEESSCCCC-----HHHHGG
T ss_pred CCCceEEEEeCCCCcc-------ccccHHH-HHH--------HHHHHHHHcCCceE----EEEecCCCC-----hHHHHh
Confidence 3459999999887653 1247774 466 78888999999999 999863210 000011
Q ss_pred ecCCCCeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-------
Q 003987 356 VSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK------- 428 (781)
Q Consensus 356 v~~~~~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~------- 428 (781)
+. .... .|+.....+.. . +..+... ...... ..+||+||++++.+...+..+.+.
T Consensus 99 ~~---~~~~--~~~~~~~~~~~-~-----i~~~~~~-----~~~~~~--~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~ 160 (413)
T 2x0d_A 99 FK---SFKY--VMPEEDKDFAL-Q-----IVPFNDR-----YNRTIP--VAKHDIFIATAWWTAYAAQRIVSWQSDTYGI 160 (413)
T ss_dssp GT---TSEE--CCTTCCCCCSE-E-----EEECSCC-----TTCCEE--ECTTEEEEECSHHHHHHHHHHHHHHHHHHTC
T ss_pred hh---ccce--eeccCCccccc-e-----eeecccc-----cccccc--CCCCCEEEEehHHHHHHHHHhhhhhhhhccc
Confidence 11 1111 11111100000 0 0000000 000000 137999999987665555444211
Q ss_pred cCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCC--EEEecCHHHHhhcccccccccccccccccc
Q 003987 429 MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNAD--FIITSTYQEIAGTKNTVGQYESHTAFTLPG 506 (781)
Q Consensus 429 ~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD--~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ 506 (781)
...+.+..+|+.++..+..... + ......+..++ .+|++|....+.+++
T Consensus 161 ~~~~~~~~v~~~~~~~~~~~~~--------~------~~~~~~~~~~~~~~vi~~S~~~~~~l~~--------------- 211 (413)
T 2x0d_A 161 PPNKILYIIQDFEPGFYQWSSQ--------Y------VLAESTYKYRGPQIAVFNSELLKQYFNN--------------- 211 (413)
T ss_dssp CCCCEEEEECSCGGGGSCSSHH--------H------HHHHHTTSCCSCEEEEEESHHHHHHHHH---------------
T ss_pred ccCcEEEEEeechhhcCccChH--------H------HHHHHHhccCCceEEEEcCHHHHHHHHH---------------
Confidence 2457787888765432211110 0 11223344444 588899877653221
Q ss_pred ceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeec-cCCC
Q 003987 507 LYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARL-DHVK 585 (781)
Q Consensus 507 ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL-~~~K 585 (781)
.|++ .+++.+++||+|.+.|.+.. .+ .++++.|+++||+ .+.|
T Consensus 212 -----~g~~--~~~~~~i~~g~d~~~~~~~~--------------------------~~---~~~~~~il~~gr~~~~~K 255 (413)
T 2x0d_A 212 -----KGYN--FTDEYFFQPKINTTLKNYIN--------------------------DK---RQKEKIILVYGRPSVKRN 255 (413)
T ss_dssp -----HTCC--CSEEEEECCCCCHHHHTTTT--------------------------SC---CCCCSEEEEEECTTCGGG
T ss_pred -----cCCC--CCceEEeCCCcCchhhcccc--------------------------cc---cCCCCEEEEEecCchhcc
Confidence 1332 35788999999976543310 11 2356688899997 6899
Q ss_pred ChHHHHHHHHHhhccCCC---eEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHH
Q 003987 586 NMTGLVECYGKNSQLREL---VNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYI 662 (781)
Q Consensus 586 gl~~LieA~~~l~~~~~~---v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~l 662 (781)
|++.+++|++++.+..|+ ++|+|+|+|+.. .++++.++|+|+| .++.+++..+|
T Consensus 256 g~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~-------------------~~l~~~~~v~f~G----~~~~~~l~~~~ 312 (413)
T 2x0d_A 256 AFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD-------------------IALGKGIHLNSLG----KLTLEDYADLL 312 (413)
T ss_dssp CHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC-------------------EEEETTEEEEEEE----SCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh-------------------hhcCCcCcEEEcC----CCCHHHHHHHH
Confidence 999999999999877665 899999998651 2456778999999 67789999999
Q ss_pred HccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 003987 663 ADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 742 (781)
Q Consensus 663 a~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~ 742 (781)
+. +|+||+||.+|+||++++||||||+|||+++ ||..|+|.++.+|++++|+|++++|++|.+++ +|++.+++
T Consensus 313 ~~-adv~v~pS~~E~~g~~~lEAmA~G~PVV~~~-~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll----~~~~~~~~- 385 (413)
T 2x0d_A 313 KR-SSIGISLMISPHPSYPPLEMAHFGLRVITNK-YENKDLSNWHSNIVSLEQLNPENIAETLVELC----MSFNNRDV- 385 (413)
T ss_dssp HH-CCEEECCCSSSSCCSHHHHHHHTTCEEEEEC-BTTBCGGGTBTTEEEESSCSHHHHHHHHHHHH----HHTC-----
T ss_pred Hh-CCEEEEecCCCCCCcHHHHHHhCCCcEEEeC-CCcchhhhcCCCEEEeCCCCHHHHHHHHHHHH----cCHHHHHH-
Confidence 95 9999999999999999999999999999964 66789999999999999999999999998887 67777766
Q ss_pred HHHHHHHHHHhcCcchh-hhccchHHHH
Q 003987 743 SDGGLKRIYERLVVSSD-GIVDPSPFVI 769 (781)
Q Consensus 743 s~~a~~~~~~~ysw~~~-~il~~ye~ll 769 (781)
+|++++ ++|||+.. .-.+.|.+++
T Consensus 386 --~~~~~~-~~~~W~~~~~~~~~~~~l~ 410 (413)
T 2x0d_A 386 --DKKESS-NMMFYINEFNEFSFIKEIE 410 (413)
T ss_dssp -----CCB-SCGGGCCCC---TTHHHHH
T ss_pred --hHHHHH-HhCCHHHHHHHHHHHHHHH
Confidence 566666 58999876 3356677665
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.9e-30 Score=278.36 Aligned_cols=340 Identities=12% Similarity=0.045 Sum_probs=235.5
Q ss_pred ceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeec
Q 003987 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVS 357 (781)
Q Consensus 278 ~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~ 357 (781)
.|||++++. .+||.+..+. .|+++|.++||+|+ ++|...... . +..
T Consensus 6 ~mkIl~~~~-------------~~gG~~~~~~--------~la~~L~~~G~~V~----v~~~~~~~~-----~---~~~- 51 (364)
T 1f0k_A 6 GKRLMVMAG-------------GTGGHVFPGL--------AVAHHLMAQGWQVR----WLGTADRME-----A---DLV- 51 (364)
T ss_dssp -CEEEEECC-------------SSHHHHHHHH--------HHHHHHHTTTCEEE----EEECTTSTH-----H---HHG-
T ss_pred CcEEEEEeC-------------CCccchhHHH--------HHHHHHHHcCCEEE----EEecCCcch-----h---hhc-
Confidence 489999971 1478777777 77778899999999 888653210 0 001
Q ss_pred CCCCeEEEEeccCCCcc-cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEE
Q 003987 358 GTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTI 436 (781)
Q Consensus 358 ~~~~~~I~rvp~~~~~~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t 436 (781)
...++.+..++.....+ ....++ ...+..+ .....+.+.+.+. +||+||++....++.+.++++..++|++++
T Consensus 52 ~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~l~~~l~~~---~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~ 125 (364)
T 1f0k_A 52 PKHGIEIDFIRISGLRGKGIKALI--AAPLRIF-NAWRQARAIMKAY---KPDVVLGMGGYVSGPGGLAAWSLGIPVVLH 125 (364)
T ss_dssp GGGTCEEEECCCCCCTTCCHHHHH--TCHHHHH-HHHHHHHHHHHHH---CCSEEEECSSTTHHHHHHHHHHTTCCEEEE
T ss_pred cccCCceEEecCCccCcCccHHHH--HHHHHHH-HHHHHHHHHHHhc---CCCEEEEeCCcCchHHHHHHHHcCCCEEEE
Confidence 11256777766543111 000000 0011111 2223344445544 899999998776677788888999999999
Q ss_pred ecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCC
Q 003987 437 AHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDV 516 (781)
Q Consensus 437 ~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~ 516 (781)
.|+.... + ...+..+.+|.+++++...
T Consensus 126 ~~~~~~~--------~--------------~~~~~~~~~d~v~~~~~~~------------------------------- 152 (364)
T 1f0k_A 126 EQNGIAG--------L--------------TNKWLAKIATKVMQAFPGA------------------------------- 152 (364)
T ss_dssp ECSSSCC--------H--------------HHHHHTTTCSEEEESSTTS-------------------------------
T ss_pred ecCCCCc--------H--------------HHHHHHHhCCEEEecChhh-------------------------------
Confidence 9974310 0 1123556799999877421
Q ss_pred CCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCE-EEEEeeccCCCChHHHHHHHH
Q 003987 517 FDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPI-VFSMARLDHVKNMTGLVECYG 595 (781)
Q Consensus 517 f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~i-Il~vGRL~~~Kgl~~LieA~~ 595 (781)
++ ++.+++||+|.+.|.+.... +.+++ ++++++ +++.|++.+.||.+.+++|++
T Consensus 153 ~~-~~~~i~n~v~~~~~~~~~~~----------------------~~~~~--~~~~~~il~~~g~~~~~k~~~~li~a~~ 207 (364)
T 1f0k_A 153 FP-NAEVVGNPVRTDVLALPLPQ----------------------QRLAG--REGPVRVLVVGGSQGARILNQTMPQVAA 207 (364)
T ss_dssp SS-SCEECCCCCCHHHHTSCCHH----------------------HHHTT--CCSSEEEEEECTTTCCHHHHHHHHHHHH
T ss_pred cC-CceEeCCccchhhcccchhh----------------------hhccc--CCCCcEEEEEcCchHhHHHHHHHHHHHH
Confidence 12 67799999998765443211 12343 344554 555679999999999999999
Q ss_pred HhhccCCCeE-EEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC
Q 003987 596 KNSQLRELVN-LVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (781)
Q Consensus 596 ~l~~~~~~v~-LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 674 (781)
++.+ +++ ++++|+++ .+.+++++++++++ +|+|+|++ +++..+|+. +|++|+||.
T Consensus 208 ~l~~---~~~~l~i~G~~~-------------~~~l~~~~~~~~~~-~v~~~g~~------~~~~~~~~~-ad~~v~~sg 263 (364)
T 1f0k_A 208 KLGD---SVTIWHQSGKGS-------------QQSVEQAYAEAGQP-QHKVTEFI------DDMAAAYAW-ADVVVCRSG 263 (364)
T ss_dssp HHGG---GEEEEEECCTTC-------------HHHHHHHHHHTTCT-TSEEESCC------SCHHHHHHH-CSEEEECCC
T ss_pred HhcC---CcEEEEEcCCch-------------HHHHHHHHhhcCCC-ceEEecch------hhHHHHHHh-CCEEEECCc
Confidence 9865 688 56677764 24677888888874 79999954 357888885 999999983
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCccccc--------cccccCCeEEEECCCC--HHHHHHHHHHHHHhccCCHHHHHHHHH
Q 003987 675 YEAFGLTVVEAMTCGLPTFATCHGGPA--------EIIEHGASGFHIDPYH--PDQAAELMADFFGKCKENPSHWKKISD 744 (781)
Q Consensus 675 ~E~fGltvlEAMa~GlPVVaT~~gG~~--------EiI~dg~~G~lv~p~d--~~~lA~~I~~~l~~l~~dp~~~~~~s~ 744 (781)
|++++|||+||+|||+|+.+|.. +++.+| .|++++++| +++++++|. ++ |++.+++|++
T Consensus 264 ----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~~~~d~~~~~la~~i~----~l--~~~~~~~~~~ 332 (364)
T 1f0k_A 264 ----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKIIEQPQLSVDAVANTLA----GW--SRETLLTMAE 332 (364)
T ss_dssp ----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEECCGGGCCHHHHHHHHH----TC--CHHHHHHHHH
T ss_pred ----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEeccccCCHHHHHHHHH----hc--CHHHHHHHHH
Confidence 99999999999999999999864 466555 599999988 999999994 44 9999999999
Q ss_pred HHHHHHHHhcCcchhhhccchHHHHHhcC
Q 003987 745 GGLKRIYERLVVSSDGIVDPSPFVINVIS 773 (781)
Q Consensus 745 ~a~~~~~~~ysw~~~~il~~ye~ll~~~~ 773 (781)
++++.+ ++|+|+. +++.|++++...+
T Consensus 333 ~~~~~~-~~~~~~~--~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 333 RARAAS-IPDATER--VANEVSRVARALE 358 (364)
T ss_dssp HHHHTC-CTTHHHH--HHHHHHHHHTTC-
T ss_pred HHHHhh-ccCHHHH--HHHHHHHHHHHHH
Confidence 999887 5899954 6677888875443
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=297.25 Aligned_cols=245 Identities=13% Similarity=0.044 Sum_probs=178.0
Q ss_pred CceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHH
Q 003987 407 FPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEI 486 (781)
Q Consensus 407 kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~ 486 (781)
++|+||.+...... ...+++..++|++++.|+..... ... ...+. ...+..+++.+|.||++|....
T Consensus 124 ~~DvIh~~~~~~~~-~~~~~~~~~~p~v~~~h~~~~~~------~~~----~~~~~--~~~~~~~~~~ad~vi~~S~~~~ 190 (406)
T 2hy7_A 124 ESDVIVFESGIAVA-FIELAKRVNPAAKLVYRASDGLS------TIN----VASYI--EREFDRVAPTLDVIALVSPAMA 190 (406)
T ss_dssp HCSEEEEESSGGGG-GHHHHHHHCTTSEEEEEESSCHH------HHT----CCHHH--HHHHHHHGGGCSEEEESCGGGG
T ss_pred CCCEEEECCchHHH-HHHHHHHhCCCEEEEEeccchhh------ccc----ccHHH--HHHHHHHHHhCCEEEEcCHHHH
Confidence 68999943322222 12566778999999999753200 000 00011 1234567899999999998764
Q ss_pred hhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCC
Q 003987 487 AGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGT 566 (781)
Q Consensus 487 ~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~ 566 (781)
+. +. .. . ++.+||||+|.+.|.+... .
T Consensus 191 ~~----~~------------------~~---~-~i~vipngvd~~~f~~~~~-------------------------~-- 217 (406)
T 2hy7_A 191 AE----VV------------------SR---D-NVFHVGHGVDHNLDQLGDP-------------------------S-- 217 (406)
T ss_dssp GG----CS------------------CS---T-TEEECCCCBCTTHHHHHCS-------------------------C--
T ss_pred HH----HH------------------hc---C-CEEEEcCCcChHhcCcccc-------------------------c--
Confidence 41 10 00 2 8999999999876532110 0
Q ss_pred CCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003987 567 LSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 567 l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~fl 646 (781)
...++++|+|+||+.+.||+ ++ .+.+..++++|+|+|+|+ ++++++.++|+|+
T Consensus 218 -~~~~~~~i~~vGrl~~~Kg~---~~---~l~~~~~~~~l~ivG~g~--------------------~~~~~l~~~V~f~ 270 (406)
T 2hy7_A 218 -PYAEGIHAVAVGSMLFDPEF---FV---VASKAFPQVTFHVIGSGM--------------------GRHPGYGDNVIVY 270 (406)
T ss_dssp -SCCSSEEEEEECCTTBCHHH---HH---HHHHHCTTEEEEEESCSS--------------------CCCTTCCTTEEEE
T ss_pred -ccCCCcEEEEEeccccccCH---HH---HHHHhCCCeEEEEEeCch--------------------HHhcCCCCCEEEc
Confidence 02234789999999999998 33 333446889999999884 3456788999999
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHH-------HcCCcEEEcCccccccccccCCeEEE-ECCCCH
Q 003987 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAM-------TCGLPTFATCHGGPAEIIEHGASGFH-IDPYHP 718 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAM-------a~GlPVVaT~~gG~~EiI~dg~~G~l-v~p~d~ 718 (781)
| .++.+++..+|+. +|++|+||..|+||++++||| |||+|||+|+. +.++.+|++ ++|+|+
T Consensus 271 G----~~~~~~l~~~~~~-adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v~~~d~ 339 (406)
T 2hy7_A 271 G----EMKHAQTIGYIKH-ARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGYTPGNA 339 (406)
T ss_dssp C----CCCHHHHHHHHHT-CSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEECTTCH
T ss_pred C----CCCHHHHHHHHHh-cCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEeCCCCH
Confidence 9 6778899999995 999999999999999999999 99999999987 677889999 999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh--hhccc--hHHHH
Q 003987 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD--GIVDP--SPFVI 769 (781)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~--~il~~--ye~ll 769 (781)
++++++|.+++ +|++ + ...++|||+.. .+++. |+++.
T Consensus 340 ~~la~ai~~ll----~~~~---------~-~~~~~~sw~~~a~~~~~~~~y~~~~ 380 (406)
T 2hy7_A 340 DSVIAAITQAL----EAPR---------V-RYRQCLNWSDTTDRVLDPRAYPETR 380 (406)
T ss_dssp HHHHHHHHHHH----HCCC---------C-CCSCCCBHHHHHHHHHCGGGSGGGB
T ss_pred HHHHHHHHHHH----hCcc---------h-hhhhcCCHHHHHHHHHHhhcccccC
Confidence 99999999887 5655 1 23478999876 55555 65543
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=290.82 Aligned_cols=336 Identities=14% Similarity=0.149 Sum_probs=220.5
Q ss_pred CCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCcccCC----CCChhhHhh--hh-----ccccchhhhhHHHHHHh
Q 003987 406 GFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKY----PDSDIYWKK--FD-----EKYHFSCQFTADLIAMN 473 (781)
Q Consensus 406 ~kpDIIh~~~~~~~lva~llar~-~gvp~v~t~H~l~~~k~----~~s~~~~k~--~~-----~~y~f~~~~~~e~~a~~ 473 (781)
.+|||+|+|+|..++++.++++. .+++.|+|+|++...++ ...++++.. +. ....+...+..++.+..
T Consensus 180 ~~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~ 259 (725)
T 3nb0_A 180 QHAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAH 259 (725)
T ss_dssp SEEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHH
Confidence 67999999999998888888754 58999999999853333 111223211 00 00111223445677888
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhh
Q 003987 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQL 553 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~ 553 (781)
.||.|+|+|+..+...+... +. .+.. +||||+|.+.|.|...........+..+.+.
T Consensus 260 ~AD~ITTVS~~yA~Ei~~Ll-------------------~r---~~d~-iIpNGID~~~f~p~~~~~~~k~~aK~klq~~ 316 (725)
T 3nb0_A 260 SADVFTTVSQITAFEAEHLL-------------------KR---KPDG-ILPNGLNVIKFQAFHEFQNLHALKKEKINDF 316 (725)
T ss_dssp HSSEEEESSHHHHHHHHHHT-------------------SS---CCSE-ECCCCBCCCCCSSTTHHHHHHHHHHHHHHHH
T ss_pred hCCEEEECCHHHHHHHHHHh-------------------cC---CCCE-EEcCCccccccCcchhhHHHHHHHHHHHHHH
Confidence 99999999998766433211 11 2233 3999999999998633221111111122221
Q ss_pred ccCccccccccCCCCC-CCCCEEEEEeecc-CCCChHHHHHHHHHhhcc-------CCCeEEEEEeCcCCCC--------
Q 003987 554 LFDPEQNDEHVGTLSD-RSKPIVFSMARLD-HVKNMTGLVECYGKNSQL-------RELVNLVVVAGYIDVN-------- 616 (781)
Q Consensus 554 l~~~~~~~~~~g~l~~-~~k~iIl~vGRL~-~~Kgl~~LieA~~~l~~~-------~~~v~LvIVG~g~~~~-------- 616 (781)
+.. .....+++ + +++++|+.+||+. +.||++.+++|+.++... ..-+.|+|+..+....
T Consensus 317 l~~--~~~~~l~l--~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~ 392 (725)
T 3nb0_A 317 VRG--HFHGCFDF--DLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQ 392 (725)
T ss_dssp HHH--HTTTCCCS--CGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHH
T ss_pred HHh--hcccCCCC--CCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcch
Confidence 100 00011333 3 3456677789999 799999999999988642 2346788888764310
Q ss_pred -----------------------------------CCc-chHHHH---------------------------------HH
Q 003987 617 -----------------------------------KSK-DREEIA---------------------------------EI 627 (781)
Q Consensus 617 -----------------------------------~~~-d~ee~~---------------------------------~~ 627 (781)
+.+ |.++.- ..
T Consensus 393 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~ 472 (725)
T 3nb0_A 393 AEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDAN 472 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGG
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCc
Confidence 001 111100 11
Q ss_pred HHHHHHHHHcCCCCc------EEEec-cccC--cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc
Q 003987 628 EKMHELMKTYKLDGQ------FRWIA-AQTN--RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG 698 (781)
Q Consensus 628 ~~l~~li~elgL~~~------V~flG-~~~~--~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g 698 (781)
+.+...++++++.++ |.|++ +.++ .+-..++..+++. +|+||+||++|+||++++||||||+|||+|+.|
T Consensus 473 D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~-advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 473 DLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRG-CHLGVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHH-CSEEECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred cHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhh-ceEEEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 223344566677655 56665 2221 1122357888884 999999999999999999999999999999999
Q ss_pred ccccccccCC-------eEEEE---CCCCHHHHHHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHhcCcchh--hhccch
Q 003987 699 GPAEIIEHGA-------SGFHI---DPYHPDQAAELMADFFGKCK-ENPSHWKKISDGGLKRIYERLVVSSD--GIVDPS 765 (781)
Q Consensus 699 G~~EiI~dg~-------~G~lv---~p~d~~~lA~~I~~~l~~l~-~dp~~~~~~s~~a~~~~~~~ysw~~~--~il~~y 765 (781)
|+.|.|.++. +|+++ ++.|+++++++|.+++..+. .++..+.+++++|++.+ ++|+|+.. .++++|
T Consensus 552 G~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A-~~FSWe~iA~~Yl~~Y 630 (725)
T 3nb0_A 552 GFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALS-DLLDWKRMGLEYVKAR 630 (725)
T ss_dssp HHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGG-GGGBHHHHHHHHHHHH
T ss_pred ChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHH
Confidence 9999998763 69988 45678888888877775543 47888999999998777 69999886 666677
Q ss_pred HHHHH
Q 003987 766 PFVIN 770 (781)
Q Consensus 766 e~ll~ 770 (781)
++++.
T Consensus 631 e~aL~ 635 (725)
T 3nb0_A 631 QLALR 635 (725)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77664
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-28 Score=281.45 Aligned_cols=175 Identities=8% Similarity=-0.008 Sum_probs=152.1
Q ss_pred ccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEe-CcCCCCCCcchHHHHHHHHHHHHHHHcCC
Q 003987 561 DEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVA-GYIDVNKSKDREEIAEIEKMHELMKTYKL 639 (781)
Q Consensus 561 ~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG-~g~~~~~~~d~ee~~~~~~l~~li~elgL 639 (781)
++.+|+ ++ +++++++||+.+ ||++.+++++.++.+..|+++|+|+| +|+. .+.++++++++|+
T Consensus 368 r~~~~~--~~-~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~------------~~~l~~~~~~~~l 431 (568)
T 2vsy_A 368 RTQCGL--PE-QGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGEA------------DARLRAFAHAQGV 431 (568)
T ss_dssp TGGGTC--CT-TSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTTH------------HHHHHHHHHHTTC
T ss_pred ccccCC--CC-CCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHHH------------HHHHHHHHHHcCC
Confidence 455776 33 345669999999 99999999999998888999999999 6654 6789999999999
Q ss_pred C-CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEE-------cCcc-------cccccc
Q 003987 640 D-GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFA-------TCHG-------GPAEII 704 (781)
Q Consensus 640 ~-~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVa-------T~~g-------G~~EiI 704 (781)
. ++|+|+| .++.+++..+|+. +|+||+||.+ +||++++|||+||+|||+ |+.| |..|+|
T Consensus 432 ~~~~v~~~g----~~~~~~~~~~~~~-adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v 505 (568)
T 2vsy_A 432 DAQRLVFMP----KLPHPQYLARYRH-ADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMN 505 (568)
T ss_dssp CGGGEEEEC----CCCHHHHHHHGGG-CSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGB
T ss_pred ChhHEEeeC----CCCHHHHHHHHhc-CCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhh
Confidence 8 9999999 5667899999995 9999999999 999999999999999999 9999 999998
Q ss_pred ccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH--HHhcCcchh--hhccchHHHHHh
Q 003987 705 EHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI--YERLVVSSD--GIVDPSPFVINV 771 (781)
Q Consensus 705 ~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~--~~~ysw~~~--~il~~ye~ll~~ 771 (781)
.+ |+++++++|.+++ .|++.+++|++++++++ .+.|||+.+ .+.+.|++++..
T Consensus 506 ~~----------~~~~la~~i~~l~----~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 506 VA----------DDAAFVAKAVALA----SDPAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARR 562 (568)
T ss_dssp CS----------SHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHT
T ss_pred cC----------CHHHHHHHHHHHh----cCHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 55 8999999998887 79999999999999998 788999776 555556665543
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-27 Score=272.03 Aligned_cols=312 Identities=11% Similarity=0.028 Sum_probs=210.1
Q ss_pred CCceEEEEcCCCchHHHHHHHHHc-CCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003987 406 GFPDFIIGNYSDGNLVASLLAYKM-GITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 406 ~kpDIIh~~~~~~~lva~llar~~-gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
..+|+||+|.+...+++..+++.. ++|++++.|..++. +. .++.+ .....-...+..+|.+...+..
T Consensus 122 ~~~DiV~vHdyhl~~l~~~lr~~~~~~~i~~~~H~pfp~----~~-~~~~l-------p~~~~il~~ll~~d~i~f~~~~ 189 (482)
T 1uqt_A 122 QDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPT----PE-IFNAL-------PTYDTLLEQLCDYDLLGFQTEN 189 (482)
T ss_dssp CTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCC----HH-HHTTS-------TTHHHHHHHHTTSSEEEESSHH
T ss_pred CCCCEEEEECchHHHHHHHHHHhCCCCcEEEEEcCCCCC----HH-HHhhC-------ccHHHHHHhhhccCeEEEECHH
Confidence 367999999987777777666654 79999999975331 11 11111 0101112235567887777655
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcH-----HHHHHhhhhcchhhhccCccc
Q 003987 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSE-----KQKRLTALHGSIEQLLFDPEQ 559 (781)
Q Consensus 485 ~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~-----~~~r~~~~~~~i~~~l~~~~~ 559 (781)
....+-....+...... ...+. ....| ...++.+||||||.+.|.+... ....+
T Consensus 190 ~~~~f~~~~~~~l~~~~-~~~~~-~~~~g---~~~~v~vip~GID~~~f~~~~~~~~~~~~~~l---------------- 248 (482)
T 1uqt_A 190 DRLAFLDCLSNLTRVTT-RSAKS-HTAWG---KAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQL---------------- 248 (482)
T ss_dssp HHHHHHHHHHHHSCEEE-ETTTE-EEETT---EEEEEEECCCCCCHHHHHHHHHSCCCHHHHHH----------------
T ss_pred HHHHHHHHHHHHhCCcc-ccCCe-EEECC---eEEEEEEEeccCCHHHHHHHhcCcchHHHHHH----------------
Confidence 43321111100000000 00011 11112 1357899999999887754211 01111
Q ss_pred cccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH
Q 003987 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK 635 (781)
Q Consensus 560 ~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~ 635 (781)
++++| ++++|+++||+++.||+..+++|++++.+.+| +++|++||+... +.-++..+..+.+++++.
T Consensus 249 -r~~~~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~---~~~~~~~~l~~~l~~l~~ 319 (482)
T 1uqt_A 249 -KAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR---GDVQAYQDIRHQLENEAG 319 (482)
T ss_dssp -HHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCS---TTSHHHHHHHHHHHHHHH
T ss_pred -HHHhC-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCc---cchHHHHHHHHHHHHHHH
Confidence 12232 57899999999999999999999999877665 478999997432 111233344566666666
Q ss_pred HcC----CC--CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC-----cEEEcCcccccccc
Q 003987 636 TYK----LD--GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-----PTFATCHGGPAEII 704 (781)
Q Consensus 636 elg----L~--~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-----PVVaT~~gG~~EiI 704 (781)
+++ .. ..|+|++ ..++.+++..+|+. +|+||+||.+||||++++||||||+ |+|+|+.+|..+.+
T Consensus 320 ~in~~~g~~~~~~v~~~~---g~v~~~el~~ly~~-ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l 395 (482)
T 1uqt_A 320 RINGKYGQLGWTPLYYLN---QHFDRKLLMKIFRY-SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL 395 (482)
T ss_dssp HHHHHHCBTTBCSEEEEC---SCCCHHHHHHHHHH-CSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC
T ss_pred HHhhhcccCCCceEEEeC---CCCCHHHHHHHHHH-ccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh
Confidence 543 22 2377643 26788999999994 9999999999999999999999997 99999988888887
Q ss_pred ccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhc
Q 003987 705 EHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 705 ~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~ 772 (781)
. +|++++|+|++++|++|.++++ .+++.++++++++++++ ++|||+ .+++.|.+.+...
T Consensus 396 ~---~g~lv~p~d~~~lA~ai~~lL~---~~~~~r~~~~~~~~~~v-~~~s~~--~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 396 T---SALIVNPYDRDEVAAALDRALT---MSLAERISRHAEMLDVI-VKNDIN--HWQECFISDLKQI 454 (482)
T ss_dssp T---TSEEECTTCHHHHHHHHHHHHT---CCHHHHHHHHHHHHHHH-HHTCHH--HHHHHHHHHHHHS
T ss_pred C---CeEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HhCCHH--HHHHHHHHHHHhc
Confidence 2 7999999999999999998882 36788999999999999 569995 4667777777654
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-28 Score=264.87 Aligned_cols=284 Identities=14% Similarity=0.136 Sum_probs=197.5
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCC-chHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHH
Q 003987 394 EDVGSEITAELQGFPDFIIGNYSD-GNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM 472 (781)
Q Consensus 394 ~~~~~~i~~~~~~kpDIIh~~~~~-~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~ 472 (781)
..+.+.+.+. +||+||+|... .++.+.++++..++|++++.|+... + . .+.. +. .........
T Consensus 85 ~~l~~~l~~~---~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~~--~---~-~~~~------~~-~~~~~~~~~ 148 (375)
T 3beo_A 85 EGLDKVMKEA---KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLRT--W---D-KYSP------YP-EEMNRQLTG 148 (375)
T ss_dssp HHHHHHHHHH---CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCCC--S---C-TTSS------TT-HHHHHHHHH
T ss_pred HHHHHHHHHh---CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccc--c---c-ccCC------Ch-hHhhhhHHh
Confidence 3445555554 89999998764 4666778888999999988776421 0 0 0000 00 001112234
Q ss_pred hhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCC-CcCCCCCCCcHHHHHHhhhhcchh
Q 003987 473 NNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHGSIE 551 (781)
Q Consensus 473 ~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~r~~~~~~~i~ 551 (781)
+.+|.++++|....+.+.+ .|++ ..++.+|+|| +|...+.+........
T Consensus 149 ~~~d~ii~~s~~~~~~~~~--------------------~g~~--~~~i~vi~n~~~d~~~~~~~~~~~~~~-------- 198 (375)
T 3beo_A 149 VMADLHFSPTAKSATNLQK--------------------ENKD--ESRIFITGNTAIDALKTTVKETYSHPV-------- 198 (375)
T ss_dssp HHCSEEEESSHHHHHHHHH--------------------TTCC--GGGEEECCCHHHHHHHHHCCSSCCCHH--------
T ss_pred hhhheeeCCCHHHHHHHHH--------------------cCCC--cccEEEECChhHhhhhhhhhhhhhHHH--------
Confidence 4599999999877552111 1333 5689999999 7865443321000000
Q ss_pred hhccCccccccccCCCCCCCCCEEEEEeeccCC-CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHH
Q 003987 552 QLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKM 630 (781)
Q Consensus 552 ~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l 630 (781)
++.+ ++++.+++++||+.+. ||++.+++|++++.+..|+++++ +|+|+. ..+
T Consensus 199 ---------~~~~----~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i-~~~g~~-------------~~~ 251 (375)
T 3beo_A 199 ---------LEKL----GNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVV-YPVHMN-------------PVV 251 (375)
T ss_dssp ---------HHTT----TTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEE-EECCSC-------------HHH
T ss_pred ---------HHhc----cCCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEE-EeCCCC-------------HHH
Confidence 0111 2344567899999876 99999999999998777889865 466654 112
Q ss_pred HHHHHHc-CCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC-ccccccccccCC
Q 003987 631 HELMKTY-KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC-HGGPAEIIEHGA 708 (781)
Q Consensus 631 ~~li~el-gL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~-~gG~~EiI~dg~ 708 (781)
.+.++++ +..++|+|+| .++..++..+|+. +|++|+|| |.+++|||+||+|||+|+ .||..|++.+|
T Consensus 252 ~~~~~~~~~~~~~v~~~g----~~~~~~~~~~~~~-ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g- 320 (375)
T 3beo_A 252 RETANDILGDYGRIHLIE----PLDVIDFHNVAAR-SYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG- 320 (375)
T ss_dssp HHHHHHHHTTCTTEEEEC----CCCHHHHHHHHHT-CSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-
T ss_pred HHHHHHHhhccCCEEEeC----CCCHHHHHHHHHh-CcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecCC-
Confidence 2233332 3346899998 5566799999995 99999998 778999999999999996 59999999888
Q ss_pred eEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 709 SGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 709 ~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
+|+++++ |+++++++|.+++ .|++.+++|++++++.+ +.|+|+. +++.+++++
T Consensus 321 ~g~~v~~-d~~~la~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~--i~~~~~~~~ 373 (375)
T 3beo_A 321 TLKLAGT-DEETIFSLADELL----SDKEAHDKMSKASNPYG-DGRASER--IVEAILKHF 373 (375)
T ss_dssp SEEECCS-CHHHHHHHHHHHH----HCHHHHHHHCCCCCTTC-CSCHHHH--HHHHHHHHT
T ss_pred ceEEcCC-CHHHHHHHHHHHH----hChHhHhhhhhcCCCCC-CCcHHHH--HHHHHHHHh
Confidence 9999987 9999999998887 79999999999988776 5788854 556666654
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-27 Score=236.23 Aligned_cols=187 Identities=17% Similarity=0.212 Sum_probs=161.4
Q ss_pred ecCCCcCCCCC--CCcH-----HHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeecc-CCCChHHHHHHHH
Q 003987 524 VSPGADMDIYF--PYSE-----KQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD-HVKNMTGLVECYG 595 (781)
Q Consensus 524 IpnGvD~~~f~--p~~~-----~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~-~~Kgl~~LieA~~ 595 (781)
||||+|.+.|. |... ... .++++|+ +++++|+++||+. +.||++.+++++.
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~------------------~r~~~~~---~~~~~i~~~G~~~~~~K~~~~li~a~~ 60 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKS------------------LLSKFGM---DEGVTFMFIGRFDRGQKGVDVLLKAIE 60 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHH------------------HHHHTTC---CSCEEEEEESCBCSSSSCHHHHHHHHH
T ss_pred CCCccChhhccccccccchhhHHHH------------------HHHHcCC---CCCCEEEEeeccccccCCHHHHHHHHH
Confidence 79999999998 7641 111 1234676 3456999999999 9999999999999
Q ss_pred Hhh--ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE-eccccCcCChHHHHHHHHccCcEEEEc
Q 003987 596 KNS--QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW-IAAQTNRARNGELYRYIADTKGAFVQP 672 (781)
Q Consensus 596 ~l~--~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~f-lG~~~~~v~~~el~~~la~aadvfV~P 672 (781)
++. +..++++|+|+|+++. +..+.+++++++++ +|+| +| .++.+++..+++. +|++|+|
T Consensus 61 ~l~~~~~~~~~~l~i~G~~~~----------~~~~~l~~~~~~~~---~v~~~~g----~~~~~~~~~~~~~-ad~~l~p 122 (200)
T 2bfw_A 61 ILSSKKEFQEMRFIIIGKGDP----------ELEGWARSLEEKHG---NVKVITE----MLSREFVRELYGS-VDFVIIP 122 (200)
T ss_dssp HHTTSGGGGGEEEEEECCBCH----------HHHHHHHHHHHHCT---TEEEECS----CCCHHHHHHHHTT-CSEEEEC
T ss_pred HHHhhccCCCeEEEEECCCCh----------HHHHHHHHHHHhcC---CEEEEec----cCCHHHHHHHHHH-CCEEEEC
Confidence 997 6678999999999862 23678888899886 8999 99 6778899999995 9999999
Q ss_pred CCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccC-CHHHHHHHHHHHHHHHH
Q 003987 673 AFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKE-NPSHWKKISDGGLKRIY 751 (781)
Q Consensus 673 S~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~-dp~~~~~~s~~a~~~~~ 751 (781)
|.+|+||++++|||+||+|||+|+.||..|++ ++.+|++++++|+++++++|.+++ . |++.+++|++++++++.
T Consensus 123 s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~----~~~~~~~~~~~~~a~~~~~ 197 (200)
T 2bfw_A 123 SYFEPFGLVALEAMCLGAIPIASAVGGLRDII-TNETGILVKAGDPGELANAILKAL----ELSRSDLSKFRENCKKRAM 197 (200)
T ss_dssp CSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC-CTTTCEEECTTCHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHCCCCEEEeCCCChHHHc-CCCceEEecCCCHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999999999999998887 7 99999999999999997
Q ss_pred HhcC
Q 003987 752 ERLV 755 (781)
Q Consensus 752 ~~ys 755 (781)
+ ||
T Consensus 198 ~-fs 200 (200)
T 2bfw_A 198 S-FS 200 (200)
T ss_dssp H-TC
T ss_pred h-cC
Confidence 7 86
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=263.14 Aligned_cols=292 Identities=11% Similarity=0.093 Sum_probs=198.5
Q ss_pred HHHHHHHHHHcCCCceEEEEcCC-CchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHH
Q 003987 394 EDVGSEITAELQGFPDFIIGNYS-DGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM 472 (781)
Q Consensus 394 ~~~~~~i~~~~~~kpDIIh~~~~-~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~ 472 (781)
..+.+.+.+. +||+||+|.. ..++.+.++++..++|++++.|++.... .|..+ . .........
T Consensus 76 ~~l~~~l~~~---~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~~~------~~~~~------~-~~~~~~~~~ 139 (384)
T 1vgv_A 76 EGLKPILAEF---KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGD------LYSPW------P-EEANRTLTG 139 (384)
T ss_dssp HHHHHHHHHH---CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSC------TTSST------T-HHHHHHHHH
T ss_pred HHHHHHHHHh---CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccccccc------ccCCC------c-hHhhHHHHH
Confidence 3445555554 8999999976 4466677788889999999988763211 00000 0 000111234
Q ss_pred hhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCC-cCCCCCCCcHH--HHHHhhhhcc
Q 003987 473 NNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEK--QKRLTALHGS 549 (781)
Q Consensus 473 ~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGv-D~~~f~p~~~~--~~r~~~~~~~ 549 (781)
+.+|.++++|....+.+. ..|++ ..++.+++||+ |...+.+.... ....
T Consensus 140 ~~~d~ii~~s~~~~~~l~--------------------~~g~~--~~~i~vi~n~~~d~~~~~~~~~~~~~~~~------ 191 (384)
T 1vgv_A 140 HLAMYHFSPTETSRQNLL--------------------RENVA--DSRIFITGNTVIDALLWVRDQVMSSDKLR------ 191 (384)
T ss_dssp TTCSEEEESSHHHHHHHH--------------------HTTCC--GGGEEECCCHHHHHHHHHHHHTTTCHHHH------
T ss_pred hhccEEEcCcHHHHHHHH--------------------HcCCC--hhhEEEeCChHHHHHHhhhhccccchhhh------
Confidence 569999999987654211 12333 56899999995 43211110000 0000
Q ss_pred hhhhccCccccccccC-CCCCCC-CCEEEEEeeccCC-CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHH
Q 003987 550 IEQLLFDPEQNDEHVG-TLSDRS-KPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAE 626 (781)
Q Consensus 550 i~~~l~~~~~~~~~~g-~l~~~~-k~iIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~ 626 (781)
.+.++.+| + +++ +.+++++||+... ||++.+++|+.++.+..++++|+++++... ..
T Consensus 192 --------~~~~~~~~~~--~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~----------~~ 251 (384)
T 1vgv_A 192 --------SELAANYPFI--DPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNP----------NV 251 (384)
T ss_dssp --------HHHHTTCTTC--CTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCH----------HH
T ss_pred --------HHHHHhcccc--CCCCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCH----------HH
Confidence 00113355 4 233 3568899999876 999999999999987778899988644211 12
Q ss_pred HHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccc
Q 003987 627 IEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIE 705 (781)
Q Consensus 627 ~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~-gG~~EiI~ 705 (781)
.+.+++++. ..++|+|+| .++..++..+|+. +|++|+|| |.+++|||+||+|||+|+. ||..|++.
T Consensus 252 ~~~l~~~~~---~~~~v~~~g----~~~~~~~~~~~~~-ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~ 318 (384)
T 1vgv_A 252 REPVNRILG---HVKNVILID----PQEYLPFVWLMNH-AWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVT 318 (384)
T ss_dssp HHHHHHHHT---TCTTEEEEC----CCCHHHHHHHHHH-CSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHH
T ss_pred HHHHHHHhh---cCCCEEEeC----CCCHHHHHHHHHh-CcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhh
Confidence 344444432 236899988 4556799999995 99999999 4458999999999999986 99999998
Q ss_pred cCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003987 706 HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 706 dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
+| +|+++++ |+++++++|.+++ .||+.+++|++++++.. +.|+|++ +++.++++++.
T Consensus 319 ~g-~g~lv~~-d~~~la~~i~~ll----~d~~~~~~~~~~~~~~~-~~~~~~~--i~~~~~~~~~~ 375 (384)
T 1vgv_A 319 AG-TVRLVGT-DKQRIVEEVTRLL----KDENEYQAMSRAHNPYG-DGQACSR--ILEALKNNRIS 375 (384)
T ss_dssp HT-SEEEECS-SHHHHHHHHHHHH----HCHHHHHHHHSSCCTTC-CSCHHHH--HHHHHHHTCCC
T ss_pred CC-ceEEeCC-CHHHHHHHHHHHH----hChHHHhhhhhccCCCc-CCCHHHH--HHHHHHHHHHh
Confidence 88 9999988 9999999998887 79999999999887765 6777754 44555555543
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=217.70 Aligned_cols=160 Identities=14% Similarity=0.195 Sum_probs=142.1
Q ss_pred CCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003987 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~ 651 (781)
+++|+|+||+.+.||++.+++|+.+++ ..++++|+|+|+|+. .+.++++++++++ +|+| |
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~-~~~~~~l~i~G~g~~------------~~~~~~~~~~~~~--~v~~-g---- 61 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSK-YKQDIVLLLKGKGPD------------EKKIKLLAQKLGV--KAEF-G---- 61 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCT-TGGGEEEEEECCSTT------------HHHHHHHHHHHTC--EEEC-C----
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhc-cCCCeEEEEEeCCcc------------HHHHHHHHHHcCC--eEEE-e----
Confidence 568999999999999999999999985 347999999999976 6788899999987 7999 9
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCC-cEEE-cCccccccccccCCeEEEECCCCHHHHHHHHHHHH
Q 003987 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGL-PTFA-TCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFF 729 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~Gl-PVVa-T~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l 729 (781)
.++.+++..+|+. +|++|+||.+|+||++++|||+||+ |||+ ++.||..+++.++.+ +++++|+++++++|.+++
T Consensus 62 ~~~~~~~~~~~~~-adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 62 FVNSNELLEILKT-CTLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LFEPNNAKDLSAKIDWWL 138 (166)
T ss_dssp CCCHHHHHHHHTT-CSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EECTTCHHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHh-CCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EEcCCCHHHHHHHHHHHH
Confidence 6678899999995 9999999999999999999999998 9999 568899999987655 889999999999998887
Q ss_pred HhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 730 GKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 730 ~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
.|++.++++++++++++ ++|||+.+
T Consensus 139 ----~~~~~~~~~~~~~~~~~-~~~s~~~~ 163 (166)
T 3qhp_A 139 ----ENKLERERMQNEYAKSA-LNYTLENS 163 (166)
T ss_dssp ----HCHHHHHHHHHHHHHHH-HHHC----
T ss_pred ----hCHHHHHHHHHHHHHHH-HHCChhhh
Confidence 79999999999999999 89999765
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=247.77 Aligned_cols=322 Identities=12% Similarity=0.046 Sum_probs=219.6
Q ss_pred HHHHHHHHHHcC-CCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCcccCCCCChhhHhhhhccccchhh--hhHHH
Q 003987 394 EDVGSEITAELQ-GFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQ--FTADL 469 (781)
Q Consensus 394 ~~~~~~i~~~~~-~kpDIIh~~~~~~~lva~llar~-~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~--~~~e~ 469 (781)
...+..+....+ ..-|+|..|.+...+++..+.++ .+.++.+..|..++. +.+ + +.+.. ...-.
T Consensus 135 ~~fA~~i~~~~~~~~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs----~e~-f-------~~Lp~~~r~ell 202 (496)
T 3t5t_A 135 RDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPS----ADY-W-------RILPKEIRTGIL 202 (496)
T ss_dssp HHHHHHHHHHTTTCSSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCC----HHH-H-------TTSCHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCC----HHH-H-------hhCcHhHHHHHH
Confidence 334444444433 35789999999987777777655 468999999976442 221 1 11110 12234
Q ss_pred HHHhhCCEEEecCHHHHhhccccccccc-cccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhc
Q 003987 470 IAMNNADFIITSTYQEIAGTKNTVGQYE-SHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHG 548 (781)
Q Consensus 470 ~a~~~AD~IIt~S~~~~~~~k~~v~qye-s~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~ 548 (781)
..|-.+|.|.+.|+..+..+.+...... ....-...+ .....|. ..++.++|+|||.+.|.+.....
T Consensus 203 ~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~-~v~~~gr---~v~v~viP~GID~~~f~~~~~~~-------- 270 (496)
T 3t5t_A 203 HGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAM-TVEWRGH---RTRLRTMPLGYSPLTLDGRNPQL-------- 270 (496)
T ss_dssp HHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTT-EEEETTE---EEEEEECCCCBCGGGC----CCC--------
T ss_pred HHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCC-eEEECCE---EEEEEEeccEeCHHHhchhhHHH--------
Confidence 5788999999999877654322221110 000000000 0011121 24778999999999987643200
Q ss_pred chhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCC---eEEEEEeCcCCCCCCcchHHHH
Q 003987 549 SIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLREL---VNLVVVAGYIDVNKSKDREEIA 625 (781)
Q Consensus 549 ~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~---v~LvIVG~g~~~~~~~d~ee~~ 625 (781)
....++.+| ++++|+++||+++.||+..+++|| ++.+.+|+ +.|++||.... +..++..+
T Consensus 271 --------~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr---~~~~~y~~ 333 (496)
T 3t5t_A 271 --------PEGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNR---LYVPANAD 333 (496)
T ss_dssp --------CTTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCC---TTSHHHHH
T ss_pred --------HHHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCC---CCchHHHH
Confidence 001122233 578999999999999999999999 88776665 67888885321 12234445
Q ss_pred HHHHHHHHHHHcC----CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcC---CcEEEcCcc
Q 003987 626 EIEKMHELMKTYK----LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCG---LPTFATCHG 698 (781)
Q Consensus 626 ~~~~l~~li~elg----L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~G---lPVVaT~~g 698 (781)
..+++.+++.+.+ .. .|+|+| .++.+++..+|+ +||+||+||.+||||++++|||||| .|+|+|..+
T Consensus 334 l~~~l~~lv~~in~~~g~~-~V~f~g----~v~~~el~aly~-~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~a 407 (496)
T 3t5t_A 334 YVHRVETAVAEANAELGSD-TVRIDN----DNDVNHTIACFR-RADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETC 407 (496)
T ss_dssp HHHHHHHHHHHHHHHHCTT-SEEEEE----CCCHHHHHHHHH-HCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTB
T ss_pred HHHHHHHHHHHhccccCCc-CEEEeC----CCCHHHHHHHHH-hccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCC
Confidence 5666777776553 22 699999 577899999999 5999999999999999999999997 899999999
Q ss_pred ccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 699 GPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 699 G~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
|..+.+ +.+|++++|+|++++|++|.++++ .+++.++++.+++++++ .++++ ..+++.|.+-+.
T Consensus 408 Ga~~~l--~~~allVnP~D~~~lA~AI~~aL~---m~~~er~~r~~~~~~~V-~~~d~--~~W~~~fl~~L~ 471 (496)
T 3t5t_A 408 GAAEVL--GEYCRSVNPFDLVEQAEAISAALA---AGPRQRAEAAARRRDAA-RPWTL--EAWVQAQLDGLA 471 (496)
T ss_dssp TTHHHH--GGGSEEECTTBHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHH-TTCBH--HHHHHHHHHHHH
T ss_pred CCHHHh--CCCEEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH-HHCCH--HHHHHHHHHHHh
Confidence 999988 347999999999999999998884 56788999999999998 56665 445555555553
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-24 Score=235.37 Aligned_cols=279 Identities=12% Similarity=0.102 Sum_probs=185.2
Q ss_pred HHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHh
Q 003987 395 DVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMN 473 (781)
Q Consensus 395 ~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~ 473 (781)
.+.+.+.+ .+||+||+|.... ++.+.++++..|+|++++.|+... +. .+.. +. .........+
T Consensus 82 ~l~~~l~~---~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~~--~~----~~~~------~~-~~~~~~~~~~ 145 (376)
T 1v4v_A 82 QAARALKE---MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS--GN----LKEP------FP-EEANRRLTDV 145 (376)
T ss_dssp HHHHHHHH---TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCC--SC----TTSS------TT-HHHHHHHHHH
T ss_pred HHHHHHHH---cCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCCcc--cc----ccCC------Cc-hHHHHHHHHH
Confidence 34444443 3899999987644 556677888999998754443311 00 0000 00 0011224456
Q ss_pred hCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCC-cCCCCCCCcHHHHHHhhhhcchhh
Q 003987 474 NADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGA-DMDIYFPYSEKQKRLTALHGSIEQ 552 (781)
Q Consensus 474 ~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGv-D~~~f~p~~~~~~r~~~~~~~i~~ 552 (781)
.+|.++++|....+.+.+ .|++ ..|+.+++|++ |...+ ...+
T Consensus 146 ~~~~~~~~s~~~~~~l~~--------------------~g~~--~~ki~vi~n~~~d~~~~-----~~~~---------- 188 (376)
T 1v4v_A 146 LTDLDFAPTPLAKANLLK--------------------EGKR--EEGILVTGQTGVDAVLL-----AAKL---------- 188 (376)
T ss_dssp HCSEEEESSHHHHHHHHT--------------------TTCC--GGGEEECCCHHHHHHHH-----HHHH----------
T ss_pred HhceeeCCCHHHHHHHHH--------------------cCCC--cceEEEECCchHHHHhh-----hhhh----------
Confidence 799999999876542111 1443 56899999864 42111 0000
Q ss_pred hccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEE-eCcCCCCCCcchHHHHHHHHHH
Q 003987 553 LLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDREEIAEIEKMH 631 (781)
Q Consensus 553 ~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIV-G~g~~~~~~~d~ee~~~~~~l~ 631 (781)
...++.+ ++++++++++||+...||++.+++|++++.+..++++++++ |+++. ..+.++
T Consensus 189 -----~~~~~~~----~~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~-----------~~~~l~ 248 (376)
T 1v4v_A 189 -----GRLPEGL----PEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPV-----------VREAVF 248 (376)
T ss_dssp -----CCCCTTC----CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHH-----------HHHHHH
T ss_pred -----hHHHHhc----CCCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCHH-----------HHHHHH
Confidence 0011111 23445677899998888999999999999877788998886 64431 234555
Q ss_pred HHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeE
Q 003987 632 ELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASG 710 (781)
Q Consensus 632 ~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT-~~gG~~EiI~dg~~G 710 (781)
+++. ..++|+|+| .+...++..+|+. +|++|.|| | |+ ++|||+||+|||++ +.||..+++.++ +|
T Consensus 249 ~~~~---~~~~v~~~g----~~g~~~~~~~~~~-ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g 314 (376)
T 1v4v_A 249 PVLK---GVRNFVLLD----PLEYGSMAALMRA-SLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKAG-IL 314 (376)
T ss_dssp HHHT---TCTTEEEEC----CCCHHHHHHHHHT-EEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SE
T ss_pred HHhc---cCCCEEEEC----CCCHHHHHHHHHh-CcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ce
Confidence 5543 246899997 4445688999995 99999999 3 44 88999999999998 578999987655 89
Q ss_pred EEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh--hhccchHHHHH
Q 003987 711 FHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD--GIVDPSPFVIN 770 (781)
Q Consensus 711 ~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~--~il~~ye~ll~ 770 (781)
++++ .|+++++++|.+++ .|++.+++|++++ +.|.|... .+++.+++++.
T Consensus 315 ~lv~-~d~~~la~~i~~ll----~d~~~~~~~~~~~-----~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 315 KLAG-TDPEGVYRVVKGLL----ENPEELSRMRKAK-----NPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp EECC-SCHHHHHHHHHHHH----TCHHHHHHHHHSC-----CSSCCSCHHHHHHHHHHHHTT
T ss_pred EECC-CCHHHHHHHHHHHH----hChHhhhhhcccC-----CCCCCChHHHHHHHHHHHHhc
Confidence 9996 49999999998887 8999999998643 56766433 55566666553
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=232.07 Aligned_cols=206 Identities=11% Similarity=0.120 Sum_probs=159.2
Q ss_pred HHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcc
Q 003987 470 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGS 549 (781)
Q Consensus 470 ~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~ 549 (781)
..++.+|.|++.|....+.+.+ .|+ . ++.+++|+. |.+.... +
T Consensus 149 ~~~~~~d~ii~~S~~~~~~l~~--------------------~g~---~-ki~vi~n~~----f~~~~~~--~------- 191 (374)
T 2xci_A 149 ILSKKFDLIIMRTQEDVEKFKT--------------------FGA---K-RVFSCGNLK----FICQKGK--G------- 191 (374)
T ss_dssp HHHTTCSEEEESCHHHHHHHHT--------------------TTC---C-SEEECCCGG----GCCCCCS--C-------
T ss_pred HHHHhCCEEEECCHHHHHHHHH--------------------cCC---C-eEEEcCCCc----cCCCcCh--h-------
Confidence 4678999999999887652211 133 2 899999973 2121100 0
Q ss_pred hhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHH
Q 003987 550 IEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEK 629 (781)
Q Consensus 550 i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~ 629 (781)
.. + .++++++.|+ ..||++.+++|++++.+..|+++|+|+|+|+. ..++
T Consensus 192 ------------~~--l----~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~-----------~~~~ 240 (374)
T 2xci_A 192 ------------IK--L----KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIE-----------NAKI 240 (374)
T ss_dssp ------------CC--C----SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGG-----------GHHH
T ss_pred ------------hh--h----cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHH-----------HHHH
Confidence 00 1 1266776665 46899999999999988889999999999875 1257
Q ss_pred HHHHHHHcCCC--------CcEEEeccccCcCChHHHHHHHHccCcEEEEcCC-CCCCcHHHHHHHHcCCcEEEc-Cccc
Q 003987 630 MHELMKTYKLD--------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-YEAFGLTVVEAMTCGLPTFAT-CHGG 699 (781)
Q Consensus 630 l~~li~elgL~--------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-~E~fGltvlEAMa~GlPVVaT-~~gG 699 (781)
++++++++++. ++|.+.|.+ +++..+|+. +|++++||. .|++|++++||||||+|||++ +.+|
T Consensus 241 l~~~~~~~gl~~~~~~~~~~~v~~~~~~------~dl~~~y~~-aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~ 313 (374)
T 2xci_A 241 FEKKARDFGFKTSFFENLEGDVILVDRF------GILKELYPV-GKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHK 313 (374)
T ss_dssp HHHHHHHTTCCEEETTCCCSSEEECCSS------SCHHHHGGG-EEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTT
T ss_pred HHHHHHHCCCceEEecCCCCcEEEECCH------HHHHHHHHh-CCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccC
Confidence 88889999886 468887732 468889995 999888765 577899999999999999985 7899
Q ss_pred cccccccC-CeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcC
Q 003987 700 PAEIIEHG-ASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLV 755 (781)
Q Consensus 700 ~~EiI~dg-~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ys 755 (781)
..|++.+. .+|++++++|+++++++|.+++ +| +.+++|+++|++++.+++.
T Consensus 314 ~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll----~d-~~r~~mg~~ar~~~~~~~g 365 (374)
T 2xci_A 314 VNDLKEFLEKEGAGFEVKNETELVTKLTELL----SV-KKEIKVEEKSREIKGCYLE 365 (374)
T ss_dssp SHHHHHHHHHTTCEEECCSHHHHHHHHHHHH----HS-CCCCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHCCCEEEeCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHHHHhccc
Confidence 99988763 5788898999999999999888 68 8999999999999977653
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-23 Score=206.79 Aligned_cols=151 Identities=19% Similarity=0.240 Sum_probs=134.2
Q ss_pred CCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH--HcCCCCcEEEe
Q 003987 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK--TYKLDGQFRWI 646 (781)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~--elgL~~~V~fl 646 (781)
+.++++|+|+||+.+.||++.+++++.++ ++++|+|+|+++. .+.++++++ ++++.++|+|+
T Consensus 20 ~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~------------~~~l~~~~~~~~~~l~~~v~~~ 83 (177)
T 2f9f_A 20 KCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSK------------GDHAERYARKIMKIAPDNVKFL 83 (177)
T ss_dssp CCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCT------------TSTHHHHHHHHHHHSCTTEEEE
T ss_pred CCCCCEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCcc------------HHHHHHHHHhhhcccCCcEEEe
Confidence 56788999999999999999999999987 5799999999876 346777788 78889999999
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHH
Q 003987 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMA 726 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~ 726 (781)
| .++.+++..+++. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.++.+|+++ +.|+++++++|.
T Consensus 84 g----~~~~~e~~~~~~~-adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~~~i~ 157 (177)
T 2f9f_A 84 G----SVSEEELIDLYSR-CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NADVNEIIDAMK 157 (177)
T ss_dssp E----SCCHHHHHHHHHH-CSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHHHHHH
T ss_pred C----CCCHHHHHHHHHh-CCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHHHHHH
Confidence 9 6778899999995 999999999999999999999999999999999999999999999999 999999999998
Q ss_pred HHHHhccCCHHH-HHHHHHH
Q 003987 727 DFFGKCKENPSH-WKKISDG 745 (781)
Q Consensus 727 ~~l~~l~~dp~~-~~~~s~~ 745 (781)
+++ .|++. +++++++
T Consensus 158 ~l~----~~~~~~~~~~~~~ 173 (177)
T 2f9f_A 158 KVS----KNPDKFKKDCFRR 173 (177)
T ss_dssp HHH----HCTTTTHHHHHHH
T ss_pred HHH----hCHHHHHHHHHHH
Confidence 887 67664 4444433
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.9e-19 Score=195.31 Aligned_cols=251 Identities=11% Similarity=0.028 Sum_probs=175.6
Q ss_pred CCCceEEEEcCCCc---hHHHHHHHH--HcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEE
Q 003987 405 QGFPDFIIGNYSDG---NLVASLLAY--KMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFII 479 (781)
Q Consensus 405 ~~kpDIIh~~~~~~---~lva~llar--~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~II 479 (781)
-.++|+|+.+++.. .+.+.++.+ +.++|+++.+|++++.... ...+ .. ..|...++.||.||
T Consensus 72 ~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~~---------~~~~--~~--~~E~~~y~~aD~Ii 138 (339)
T 3rhz_A 72 LRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMFS---------GNFY--LM--DRTIAYYNKADVVV 138 (339)
T ss_dssp CCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHCG---------GGGG--GH--HHHHHHHTTCSEEE
T ss_pred CCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhCc---------cchh--hH--HHHHHHHHHCCEEE
Confidence 35899999988764 233445555 3489999999999764432 1111 11 24778999999999
Q ss_pred ecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccc
Q 003987 480 TSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQ 559 (781)
Q Consensus 480 t~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~ 559 (781)
+.|+...+.+. .+|++ ..++.++++. |... +.+
T Consensus 139 ~~S~~~~~~l~--------------------~~G~~--~~ki~~~~~~-~~~~--~~~---------------------- 171 (339)
T 3rhz_A 139 APSQKMIDKLR--------------------DFGMN--VSKTVVQGMW-DHPT--QAP---------------------- 171 (339)
T ss_dssp ESCHHHHHHHH--------------------HTTCC--CSEEEECCSC-CCCC--CCC----------------------
T ss_pred ECCHHHHHHHH--------------------HcCCC--cCceeecCCC-CccC--ccc----------------------
Confidence 99998765321 12443 3566444332 2110 100
Q ss_pred cccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC
Q 003987 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 639 (781)
Q Consensus 560 ~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL 639 (781)
... +.++++|+|+|+++....+. ...++++|+|+|+|+. . .+
T Consensus 172 ----~~~--~~~~~~i~yaG~l~k~~~L~----------~l~~~~~f~ivG~G~~------------~----------~l 213 (339)
T 3rhz_A 172 ----MFP--AGLKREIHFPGNPERFSFVK----------EWKYDIPLKVYTWQNV------------E----------LP 213 (339)
T ss_dssp ----CCC--CEEEEEEEECSCTTTCGGGG----------GCCCSSCEEEEESCCC------------C----------CC
T ss_pred ----ccc--cCCCcEEEEeCCcchhhHHH----------hCCCCCeEEEEeCCcc------------c----------Cc
Confidence 001 23567899999999643322 2247899999999976 1 24
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC-------CCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEE
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF-------YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFH 712 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~-------~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~l 712 (781)
+ +|+|+| .++.+++..+++. +|+.+.+.. ...+|.+++||||||+|||+++.|+..++|.++.+|+.
T Consensus 214 ~-nV~f~G----~~~~~el~~~l~~-~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~ 287 (339)
T 3rhz_A 214 Q-NVHKIN----YRPDEQLLMEMSQ-GGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLGWI 287 (339)
T ss_dssp T-TEEEEE----CCCHHHHHHHHHT-EEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEE
T ss_pred C-CEEEeC----CCCHHHHHHHHHh-CCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEE
Confidence 4 899999 7888999999985 677666511 13569999999999999999999999999999999999
Q ss_pred ECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh---hhccchHHH
Q 003987 713 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD---GIVDPSPFV 768 (781)
Q Consensus 713 v~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~---~il~~ye~l 768 (781)
++ +.++++++|..+ +++.+++|++++++.+ ++++|... ++.+.+.++
T Consensus 288 ~~--~~~e~~~~i~~l------~~~~~~~m~~na~~~a-~~~~~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 288 VK--DVEEAIMKVKNV------NEDEYIELVKNVRSFN-PILRKGFFTRRLLTESVFQA 337 (339)
T ss_dssp ES--SHHHHHHHHHHC------CHHHHHHHHHHHHHHT-HHHHTTHHHHHHHHHHHHHH
T ss_pred eC--CHHHHHHHHHHh------CHHHHHHHHHHHHHHH-HHhhccHHHHHHHHHHHHHh
Confidence 97 688888888642 4678999999999886 66887665 444444444
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-18 Score=191.93 Aligned_cols=162 Identities=12% Similarity=0.075 Sum_probs=123.6
Q ss_pred CCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003987 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~ 649 (781)
+.+.++++.|++. .|+...+.+++..+.+. ++++++++++.... +.+. ++.++|++.|+.
T Consensus 241 ~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~~~-----------~~l~------~~~~~v~~~~~~ 300 (412)
T 3otg_A 241 ARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL--DADVLVASGPSLDV-----------SGLG------EVPANVRLESWV 300 (412)
T ss_dssp TSCEEEEECTTTT-CSCHHHHHHHHHHHHTS--SSEEEEECCSSCCC-----------TTCC------CCCTTEEEESCC
T ss_pred CCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC--CCEEEEEECCCCCh-----------hhhc------cCCCcEEEeCCC
Confidence 3445678889986 77888888887777653 57777776654310 0111 356789999954
Q ss_pred cCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCCeEEEECCC--CHHHHHH
Q 003987 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEHGASGFHIDPY--HPDQAAE 723 (781)
Q Consensus 650 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g----G~~EiI~dg~~G~lv~p~--d~~~lA~ 723 (781)
+ +..+++ .+|++|.++- +.+++|||+||+|+|++..+ +..+.+.++++|++++++ |++++++
T Consensus 301 ----~---~~~~l~-~ad~~v~~~g----~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ 368 (412)
T 3otg_A 301 ----P---QAALLP-HVDLVVHHGG----SGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSG 368 (412)
T ss_dssp ----C---HHHHGG-GCSEEEESCC----HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHH
T ss_pred ----C---HHHHHh-cCcEEEECCc----hHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHH
Confidence 2 566777 5999998762 48999999999999996544 478888888999999987 8999999
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 724 LMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 724 ~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
+|.+++ .|++.+++|++.+++.. +.++| ..+++.+++++.
T Consensus 369 ai~~ll----~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~l~~ 408 (412)
T 3otg_A 369 AAKRLL----AEESYRAGARAVAAEIA-AMPGP--DEVVRLLPGFAS 408 (412)
T ss_dssp HHHHHH----HCHHHHHHHHHHHHHHH-HSCCH--HHHHTTHHHHHC
T ss_pred HHHHHH----hCHHHHHHHHHHHHHHh-cCCCH--HHHHHHHHHHhc
Confidence 998888 79999999999988877 66777 457788888763
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-16 Score=176.46 Aligned_cols=346 Identities=15% Similarity=0.075 Sum_probs=202.1
Q ss_pred CceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeee
Q 003987 277 MVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERV 356 (781)
Q Consensus 277 ~~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v 356 (781)
|..||+|.+ | -|||-.. .+| .|+++|.++||+|. ++|....- . .+.+
T Consensus 1 M~~~i~i~~--G-----------GTgGHi~------pal--ala~~L~~~g~~V~----~vg~~~g~----e----~~~v 47 (365)
T 3s2u_A 1 MKGNVLIMA--G-----------GTGGHVF------PAL--ACAREFQARGYAVH----WLGTPRGI----E----NDLV 47 (365)
T ss_dssp --CEEEEEC--C-----------SSHHHHH------HHH--HHHHHHHHTTCEEE----EEECSSST----H----HHHT
T ss_pred CCCcEEEEc--C-----------CCHHHHH------HHH--HHHHHHHhCCCEEE----EEECCchH----h----hchh
Confidence 566888764 1 2677433 333 68888999999998 88754210 0 0001
Q ss_pred cCCCCeEEEEeccCCCcc-cccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEE
Q 003987 357 SGTEHTHILRVPFRSEKG-ILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCT 435 (781)
Q Consensus 357 ~~~~~~~I~rvp~~~~~~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~ 435 (781)
+ ..+..+..+|.....+ ...+++. ..+..+.. ...+.+.+++. +||+|++.....+..+.++++.+|+|+++
T Consensus 48 ~-~~g~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~l~~~---~PDvVi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 48 P-KAGLPLHLIQVSGLRGKGLKSLVK--APLELLKS-LFQALRVIRQL---RPVCVLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp G-GGTCCEEECC----------------CHHHHHHH-HHHHHHHHHHH---CCSEEEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred h-hcCCcEEEEECCCcCCCCHHHHHH--HHHHHHHH-HHHHHHHHHhc---CCCEEEEcCCcchHHHHHHHHHcCCCEEE
Confidence 1 1234555555433211 0001110 11222222 22344455554 99999999888888888899999999885
Q ss_pred EecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCC
Q 003987 436 IAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGID 515 (781)
Q Consensus 436 t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~ 515 (781)
.-.+..+ . .+.++..+.++.|.+..+.. +
T Consensus 121 he~n~~~------G----------------~~nr~l~~~a~~v~~~~~~~----------~------------------- 149 (365)
T 3s2u_A 121 HEQNAVA------G----------------TANRSLAPIARRVCEAFPDT----------F------------------- 149 (365)
T ss_dssp EECSSSC------C----------------HHHHHHGGGCSEEEESSTTS----------S-------------------
T ss_pred Eecchhh------h----------------hHHHhhccccceeeeccccc----------c-------------------
Confidence 3222111 0 01223455678776654321 0
Q ss_pred CCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCE-EEEEeeccCCCChHHHHHHH
Q 003987 516 VFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPI-VFSMARLDHVKNMTGLVECY 594 (781)
Q Consensus 516 ~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~i-Il~vGRL~~~Kgl~~LieA~ 594 (781)
....|..++.|.+..+.+.... ...++ +++++. +++.|+++..+..+.+.+++
T Consensus 150 ~~~~k~~~~g~pvr~~~~~~~~------------------------~~~~~--~~~~~~ilv~gGs~g~~~~~~~~~~al 203 (365)
T 3s2u_A 150 PASDKRLTTGNPVRGELFLDAH------------------------ARAPL--TGRRVNLLVLGGSLGAEPLNKLLPEAL 203 (365)
T ss_dssp CC---CEECCCCCCGGGCCCTT------------------------SSCCC--TTSCCEEEECCTTTTCSHHHHHHHHHH
T ss_pred cCcCcEEEECCCCchhhccchh------------------------hhccc--CCCCcEEEEECCcCCccccchhhHHHH
Confidence 0134666777777665443221 12333 344555 55557888888888888999
Q ss_pred HHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC
Q 003987 595 GKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF 674 (781)
Q Consensus 595 ~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~ 674 (781)
+.+... .++.++++++..+ .+.+.+..++.+ .++++.++.+ ++..+|+ .+|++|.-+
T Consensus 204 ~~l~~~-~~~~vi~~~G~~~------------~~~~~~~~~~~~--~~~~v~~f~~------dm~~~l~-~aDlvI~ra- 260 (365)
T 3s2u_A 204 AQVPLE-IRPAIRHQAGRQH------------AEITAERYRTVA--VEADVAPFIS------DMAAAYA-WADLVICRA- 260 (365)
T ss_dssp HTSCTT-TCCEEEEECCTTT------------HHHHHHHHHHTT--CCCEEESCCS------CHHHHHH-HCSEEEECC-
T ss_pred Hhcccc-cceEEEEecCccc------------cccccceecccc--cccccccchh------hhhhhhc-cceEEEecC-
Confidence 887643 3455555544333 345555556655 4577888654 3677888 499999764
Q ss_pred CCCCcHHHHHHHHcCCcEEEcCcccc--------ccccccCCeEEEECCC--CHHHHHHHHHHHHHhccCCHHHHHHHHH
Q 003987 675 YEAFGLTVVEAMTCGLPTFATCHGGP--------AEIIEHGASGFHIDPY--HPDQAAELMADFFGKCKENPSHWKKISD 744 (781)
Q Consensus 675 ~E~fGltvlEAMa~GlPVVaT~~gG~--------~EiI~dg~~G~lv~p~--d~~~lA~~I~~~l~~l~~dp~~~~~~s~ 744 (781)
-+.|+.|+|++|+|+|....++. ++.+.+.+.|++++.. +++.++++|.+++ .||+.+++|++
T Consensus 261 ---G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll----~d~~~~~~m~~ 333 (365)
T 3s2u_A 261 ---GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVL----MHPETLRSMAD 333 (365)
T ss_dssp ---CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHH----HCTHHHHHHHH
T ss_pred ---CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHH----CCHHHHHHHHH
Confidence 37899999999999998765432 3455666689998755 5889999998888 89999999999
Q ss_pred HHHHHHHHhcCcchhhhccchHHHHHhc
Q 003987 745 GGLKRIYERLVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 745 ~a~~~~~~~ysw~~~~il~~ye~ll~~~ 772 (781)
++++.... . ....+++..+++...+
T Consensus 334 ~a~~~~~~-~--aa~~ia~~i~~larG~ 358 (365)
T 3s2u_A 334 QARSLAKP-E--ATRTVVDACLEVARGL 358 (365)
T ss_dssp HHHHTCCT-T--HHHHHHHHHHHHC---
T ss_pred HHHhcCCc-c--HHHHHHHHHHHHHccc
Confidence 99876421 1 1235666666665443
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.4e-17 Score=181.90 Aligned_cols=161 Identities=12% Similarity=0.053 Sum_probs=112.4
Q ss_pred CCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEE-EEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003987 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNL-VVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~L-vIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~ 648 (781)
+++.+++++|++. .++...+.+++..+.+. +++++ +++|+++. .+.+ + .+.++|++.|+
T Consensus 231 ~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~-~~~~~~~~~G~~~~------------~~~l----~--~~~~~v~~~~~ 290 (430)
T 2iyf_A 231 AEKVVLVSLGSAF-TKQPAFYRECVRAFGNL-PGWHLVLQIGRKVT------------PAEL----G--ELPDNVEVHDW 290 (430)
T ss_dssp CSEEEEEECTTTC-C-CHHHHHHHHHHHTTC-TTEEEEEECC---C------------GGGG----C--SCCTTEEEESS
T ss_pred CCCeEEEEcCCCC-CCcHHHHHHHHHHHhcC-CCeEEEEEeCCCCC------------hHHh----c--cCCCCeEEEec
Confidence 3456788999998 55655555555545432 46787 56787754 1111 1 24678999995
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCCeEEEECCC--CHHHHH
Q 003987 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HPDQAA 722 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG----~~EiI~dg~~G~lv~p~--d~~~lA 722 (781)
.+ .. .+++ .+|++|..+- +.+++|||++|+|+|++..++ ..+.+.+.+.|+.++++ |+++++
T Consensus 291 ~~----~~---~~l~-~ad~~v~~~G----~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~ 358 (430)
T 2iyf_A 291 VP----QL---AILR-QADLFVTHAG----AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLR 358 (430)
T ss_dssp CC----HH---HHHT-TCSEEEECCC----HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHH
T ss_pred CC----HH---HHhh-ccCEEEECCC----ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHH
Confidence 43 33 5666 5999999752 379999999999999997655 46667777899999887 889999
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 723 ELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
++|.+++ .|++.++++++.+++.. +.++|+. +++.+++++
T Consensus 359 ~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~i~~~~ 398 (430)
T 2iyf_A 359 ETALALV----DDPEVARRLRRIQAEMA-QEGGTRR--AADLIEAEL 398 (430)
T ss_dssp HHHHHHH----HCHHHHHHHHHHHHHHH-HHCHHHH--HHHHHHTTS
T ss_pred HHHHHHH----cCHHHHHHHHHHHHHHH-hcCcHHH--HHHHHHHHh
Confidence 9998887 79999999999888766 4566643 444444444
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-17 Score=184.31 Aligned_cols=161 Identities=11% Similarity=0.010 Sum_probs=119.9
Q ss_pred CCCEEEEEeeccCCCCh-HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003987 571 SKPIVFSMARLDHVKNM-TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kgl-~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~ 649 (781)
.+.+++++|++...|+. ..+++++.+. +..|+++++++|++.. .+.+. ++.++|++.|+
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~------------~~~l~------~~~~~v~~~~~- 277 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEH------------RALLT------DLPDNARIAES- 277 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGG------------GGGCT------TCCTTEEECCS-
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcc------------hhhcc------cCCCCEEEecc-
Confidence 34567778999775555 7777777777 6667899999998854 11111 35678999995
Q ss_pred cCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEE----cCccccccccccCCeEEEECC----CCHHHH
Q 003987 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFA----TCHGGPAEIIEHGASGFHIDP----YHPDQA 721 (781)
Q Consensus 650 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVa----T~~gG~~EiI~dg~~G~lv~p----~d~~~l 721 (781)
++..+++ + ++|++|.. +.+.+++|||++|+|+|+ ++..+..+.+.+.+.|..+++ .|++++
T Consensus 278 ---~~~~~ll---~-~ad~~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l 346 (391)
T 3tsa_A 278 ---VPLNLFL---R-TCELVICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQF 346 (391)
T ss_dssp ---CCGGGTG---G-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHH
T ss_pred ---CCHHHHH---h-hCCEEEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHH
Confidence 4444444 5 69999975 345799999999999999 455667788888899999998 789999
Q ss_pred HHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 722 AELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 722 A~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
+++|.+++ .||+.++++++.+.+.. +..+|+ .+++..++++
T Consensus 347 ~~ai~~ll----~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~i~~~~ 387 (391)
T 3tsa_A 347 TDSIATVL----GDTGFAAAAIKLSDEIT-AMPHPA--ALVRTLENTA 387 (391)
T ss_dssp HHHHHHHH----TCTHHHHHHHHHHHHHH-TSCCHH--HHHHHHHHC-
T ss_pred HHHHHHHH----cCHHHHHHHHHHHHHHH-cCCCHH--HHHHHHHHHH
Confidence 99998887 89999999998877665 556663 3445555443
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.6e-17 Score=181.47 Aligned_cols=276 Identities=13% Similarity=0.137 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhH
Q 003987 389 LETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTA 467 (781)
Q Consensus 389 l~~f~~~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~ 467 (781)
.......+.+.+.+. +||+||++.... .+.+.+++++.|+|++...+++ .. + +.+....+. ..
T Consensus 96 ~~~~~~~l~~~l~~~---kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~-rs-~---~~~~~~~~~--------~~ 159 (396)
T 3dzc_A 96 TSKILLGMQQVLSSE---QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL-RT-G---NIYSPWPEE--------GN 159 (396)
T ss_dssp HHHHHHHHHHHHHHH---CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC-CC-S---CTTSSTTHH--------HH
T ss_pred HHHHHHHHHHHHHhc---CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-cc-c---ccccCCcHH--------HH
Confidence 334444555566655 999999988665 4666788999999976543322 11 1 000000000 01
Q ss_pred HHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCC-CcCCCCCCCcHHH-HHHhh
Q 003987 468 DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQ-KRLTA 545 (781)
Q Consensus 468 e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~-~r~~~ 545 (781)
.....+.+|.+++.|+...+.+. ..|++ ..++.++.|. +|...+.+..... ...
T Consensus 160 r~~~~~~a~~~~~~se~~~~~l~--------------------~~G~~--~~ki~vvGn~~~d~~~~~~~~~~~~~~~-- 215 (396)
T 3dzc_A 160 RKLTAALTQYHFAPTDTSRANLL--------------------QENYN--AENIFVTGNTVIDALLAVREKIHTDMDL-- 215 (396)
T ss_dssp HHHHHHTCSEEEESSHHHHHHHH--------------------HTTCC--GGGEEECCCHHHHHHHHHHHHHHHCHHH--
T ss_pred HHHHHHhcCEEECCCHHHHHHHH--------------------HcCCC--cCcEEEECCcHHHHHHHhhhhcccchhh--
Confidence 11234678999999987654211 12443 6689999874 4432211100000 000
Q ss_pred hhcchhhhccCccccccccCCCCCCCCCE-EEEEeecc-CCCChHHHHHHHHHhhccCCCeEEEEE-eCcCCCCCCcchH
Q 003987 546 LHGSIEQLLFDPEQNDEHVGTLSDRSKPI-VFSMARLD-HVKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDRE 622 (781)
Q Consensus 546 ~~~~i~~~l~~~~~~~~~~g~l~~~~k~i-Il~vGRL~-~~Kgl~~LieA~~~l~~~~~~v~LvIV-G~g~~~~~~~d~e 622 (781)
....++++|++ ++++++ +++.+|.. ..|++..+++|+.++.+.+|++++++. |.++.
T Consensus 216 -----------~~~~r~~lg~l-~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~-------- 275 (396)
T 3dzc_A 216 -----------QATLESQFPML-DASKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLNPN-------- 275 (396)
T ss_dssp -----------HHHHHHTCTTC-CTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBCHH--------
T ss_pred -----------HHHHHHHhCcc-CCCCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCChH--------
Confidence 00112446632 334455 44555654 358899999999999887789999886 43321
Q ss_pred HHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-Cccccc
Q 003987 623 EIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPA 701 (781)
Q Consensus 623 e~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT-~~gG~~ 701 (781)
..+.++++ ++..++|++++ .+...++..+|+. +|++|.+| | |++ +|||+||+|||++ +.++..
T Consensus 276 ---~~~~l~~~---~~~~~~v~~~~----~lg~~~~~~l~~~-ad~vv~~S---G-g~~-~EA~a~G~PvV~~~~~~~~~ 339 (396)
T 3dzc_A 276 ---VREPVNKL---LKGVSNIVLIE----PQQYLPFVYLMDR-AHIILTDS---G-GIQ-EEAPSLGKPVLVMRETTERP 339 (396)
T ss_dssp ---HHHHHHHH---TTTCTTEEEEC----CCCHHHHHHHHHH-CSEEEESC---S-GGG-TTGGGGTCCEEECCSSCSCH
T ss_pred ---HHHHHHHH---HcCCCCEEEeC----CCCHHHHHHHHHh-cCEEEECC---c-cHH-HHHHHcCCCEEEccCCCcch
Confidence 12233322 34557899988 5566788899995 99999998 3 444 8999999999999 788888
Q ss_pred cccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 003987 702 EIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 702 EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
|++++| +++++++ |+++++++|.+++ .|++.+++|++++
T Consensus 340 e~v~~G-~~~lv~~-d~~~l~~ai~~ll----~d~~~~~~m~~~~ 378 (396)
T 3dzc_A 340 EAVAAG-TVKLVGT-NQQQICDALSLLL----TDPQAYQAMSQAH 378 (396)
T ss_dssp HHHHHT-SEEECTT-CHHHHHHHHHHHH----HCHHHHHHHHTSC
T ss_pred HHHHcC-ceEEcCC-CHHHHHHHHHHHH----cCHHHHHHHhhcc
Confidence 998887 5787765 8999999998887 7999999998765
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-17 Score=185.11 Aligned_cols=149 Identities=9% Similarity=0.002 Sum_probs=99.4
Q ss_pred CCCCEEEEEeeccCCC----------ChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC
Q 003987 570 RSKPIVFSMARLDHVK----------NMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 639 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~K----------gl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL 639 (781)
..+++++++|++...| .+..++++++++ ++++++++++.. .+.+. .+
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~------------~~~l~------~~ 282 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-----GFEVVVAVSDKL------------AQTLQ------PL 282 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGGG-----TCEEEECCCC--------------------------C
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-----CCEEEEEeCCcc------------hhhhc------cC
Confidence 3456788899997555 455666665543 588999888754 12222 35
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEE----cCccccccccccCCeEEEECC
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFA----TCHGGPAEIIEHGASGFHIDP 715 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVa----T~~gG~~EiI~dg~~G~lv~p 715 (781)
.++|++.|+ ++. ..+++ .+|++|.. +.+.+++|||+||+|+|+ ++..+.++.+++.+.|+++++
T Consensus 283 ~~~v~~~~~----~~~---~~ll~-~ad~~v~~----gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~ 350 (398)
T 4fzr_A 283 PEGVLAAGQ----FPL---SAIMP-ACDVVVHH----GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPW 350 (398)
T ss_dssp CTTEEEESC----CCH---HHHGG-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC-
T ss_pred CCcEEEeCc----CCH---HHHHh-hCCEEEec----CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCc
Confidence 689999994 443 45555 59999965 447899999999999999 555678888889999999988
Q ss_pred C--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcch
Q 003987 716 Y--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSS 758 (781)
Q Consensus 716 ~--d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~ 758 (781)
. |+++++++|.+++ .||+.++++++.+++.. +..+|+.
T Consensus 351 ~~~~~~~l~~ai~~ll----~~~~~~~~~~~~~~~~~-~~~~~~~ 390 (398)
T 4fzr_A 351 EQAGVESVLAACARIR----DDSSYVGNARRLAAEMA-TLPTPAD 390 (398)
T ss_dssp ------CHHHHHHHHH----HCTHHHHHHHHHHHHHT-TSCCHHH
T ss_pred ccCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHH-cCCCHHH
Confidence 7 7889999998887 79999999998887765 5566643
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=5.3e-16 Score=171.70 Aligned_cols=157 Identities=13% Similarity=0.115 Sum_probs=110.9
Q ss_pred CCCCEEEEEeeccCC-CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003987 570 RSKPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~ 648 (781)
..+++++++|++... |+...+.+++..+.+. ++++++++++.+. +.+. ++.++|++.|+
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~g~~~~------------~~l~------~~~~~v~~~~~ 290 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGEV--DADFVLALGDLDI------------SPLG------TLPRNVRAVGW 290 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS--SSEEEEECTTSCC------------GGGC------SCCTTEEEESS
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHHcC--CCEEEEEECCcCh------------hhhc------cCCCcEEEEcc
Confidence 345677888999654 3555555555555443 6899999988651 1111 35688999995
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEE----cCccccc--cccccCCeEEEECCC--CHHH
Q 003987 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFA----TCHGGPA--EIIEHGASGFHIDPY--HPDQ 720 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVa----T~~gG~~--EiI~dg~~G~lv~p~--d~~~ 720 (781)
++. ..+++ .+|++|.. +-+.|+.|||++|+|+|+ .+.++.+ +.+++.+.|+.+++. ++++
T Consensus 291 ----~~~---~~ll~-~ad~~v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~ 358 (398)
T 3oti_A 291 ----TPL---HTLLR-TCTAVVHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADL 358 (398)
T ss_dssp ----CCH---HHHHT-TCSEEEEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHH
T ss_pred ----CCH---HHHHh-hCCEEEEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHH
Confidence 434 44555 59999975 345799999999999999 5678888 999999999999876 5555
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 721 lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
++ +++ .||++++++++.+.+.. +..+|+ .+++..++++
T Consensus 359 l~----~ll----~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~l~~l~ 396 (398)
T 3oti_A 359 LR----RLI----GDESLRTAAREVREEMV-ALPTPA--ETVRRIVERI 396 (398)
T ss_dssp HH----HHH----HCHHHHHHHHHHHHHHH-TSCCHH--HHHHHHHHHH
T ss_pred HH----HHH----cCHHHHHHHHHHHHHHH-hCCCHH--HHHHHHHHHh
Confidence 55 444 79999999988887765 566663 4555555553
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.68 E-value=8.9e-16 Score=168.83 Aligned_cols=159 Identities=13% Similarity=0.108 Sum_probs=109.2
Q ss_pred CCCCEEEEEeeccCCC--ChHHHHHHHHHhhccCCCeEEEE-EeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003987 570 RSKPIVFSMARLDHVK--NMTGLVECYGKNSQLRELVNLVV-VAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~K--gl~~LieA~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~fl 646 (781)
..+.++++.|+....+ .+..++++++ +. + +++++ +|++.+ .+.+. .+.++|++.
T Consensus 230 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~---~~-~-~~~~~~~g~~~~------------~~~~~------~~~~~v~~~ 286 (402)
T 3ia7_A 230 DAPVLLVSLGNQFNEHPEFFRACAQAFA---DT-P-WHVVMAIGGFLD------------PAVLG------PLPPNVEAH 286 (402)
T ss_dssp TCCEEEEECCSCSSCCHHHHHHHHHHHT---TS-S-CEEEEECCTTSC------------GGGGC------SCCTTEEEE
T ss_pred CCCEEEEECCCCCcchHHHHHHHHHHHh---cC-C-cEEEEEeCCcCC------------hhhhC------CCCCcEEEe
Confidence 3455678889987665 2334444433 22 2 56655 554433 11111 256789999
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEE-----cCccccccccccCCeEEEECCC--CHH
Q 003987 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFA-----TCHGGPAEIIEHGASGFHIDPY--HPD 719 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVa-----T~~gG~~EiI~dg~~G~lv~p~--d~~ 719 (781)
|+. +.. .+++ .+|++|..+- ..|++|||++|+|+|+ .+..+.++.+.+.+.|..++++ +++
T Consensus 287 ~~~----~~~---~ll~-~ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~ 354 (402)
T 3ia7_A 287 QWI----PFH---SVLA-HARACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPA 354 (402)
T ss_dssp SCC----CHH---HHHT-TEEEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHH
T ss_pred cCC----CHH---HHHh-hCCEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHH
Confidence 953 333 5666 5999998853 3789999999999994 4455778888888999999876 899
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHH
Q 003987 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVIN 770 (781)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~ 770 (781)
+++++|.+++ .|++.++++++.+.+.. +..++ ..+++..++++.
T Consensus 355 ~l~~~~~~ll----~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~i~~~~~ 398 (402)
T 3ia7_A 355 SIREAVERLA----ADSAVRERVRRMQRDIL-SSGGP--ARAADEVEAYLG 398 (402)
T ss_dssp HHHHHHHHHH----HCHHHHHHHHHHHHHHH-TSCHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHH----cCHHHHHHHHHHHHHHh-hCChH--HHHHHHHHHHHh
Confidence 9999998887 79999999988776654 44444 345555666553
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.67 E-value=9.5e-16 Score=171.28 Aligned_cols=269 Identities=16% Similarity=0.146 Sum_probs=174.4
Q ss_pred HHHHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhH
Q 003987 389 LETFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTA 467 (781)
Q Consensus 389 l~~f~~~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~ 467 (781)
.......+.+.+.+. +||+||++.... .+.+.+++++.|+|++....++ .+ + +.++...+. ..
T Consensus 99 ~~~~~~~l~~~l~~~---kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl-rs-~---~~~~~~p~~--------~~ 162 (403)
T 3ot5_A 99 TSRVMNGINEVIAAE---NPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL-RT-W---NKYSPFPEE--------MN 162 (403)
T ss_dssp HHHHHHHHHHHHHHH---CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC-CC-S---CTTSSTTHH--------HH
T ss_pred HHHHHHHHHHHHHHc---CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-cc-c---ccccCCcHH--------HH
Confidence 334444555566555 999999988654 5666788999999976443222 11 0 001000000 01
Q ss_pred HHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecC-CCcCCCCCCCcHHHHHHhhh
Q 003987 468 DLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTAL 546 (781)
Q Consensus 468 e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~ 546 (781)
....-..+|.+++.|+...+.+. ..|++ ..++.++.| ++|...+.+.....
T Consensus 163 r~~~~~~a~~~~~~se~~~~~l~--------------------~~Gi~--~~~i~vvGn~~~D~~~~~~~~~~~------ 214 (403)
T 3ot5_A 163 RQLTGVMADIHFSPTKQAKENLL--------------------AEGKD--PATIFVTGNTAIDALKTTVQKDYH------ 214 (403)
T ss_dssp HHHHHHHCSEEEESSHHHHHHHH--------------------HTTCC--GGGEEECCCHHHHHHHHHSCTTCC------
T ss_pred HHHHHHhcCEEECCCHHHHHHHH--------------------HcCCC--cccEEEeCCchHHHHHhhhhhhcc------
Confidence 11234458999999987654211 12443 678999987 45543221111000
Q ss_pred hcchhhhccCccccccccCCCCCCCCCEEEEEeeccC-CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHH
Q 003987 547 HGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDH-VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIA 625 (781)
Q Consensus 547 ~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~-~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~ 625 (781)
.+..+.+ ++++.++++.||... .|++..+++|+.++.+.+|+++++++++...
T Consensus 215 -----------~~~~~~l----~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~----------- 268 (403)
T 3ot5_A 215 -----------HPILENL----GDNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNP----------- 268 (403)
T ss_dssp -----------CHHHHSC----TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCH-----------
T ss_pred -----------hHHHHhc----cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCH-----------
Confidence 0000111 223345666777644 4789999999999988788999988753211
Q ss_pred HHHHHHHHHHH-cCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-Cccccccc
Q 003987 626 EIEKMHELMKT-YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEI 703 (781)
Q Consensus 626 ~~~~l~~li~e-lgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT-~~gG~~Ei 703 (781)
.+++.+++ ++..++|+++| .+...++..+++. +|++|.+| |-..+|||+||+|+|++ +.|+..|.
T Consensus 269 ---~~~~~l~~~~~~~~~v~l~~----~l~~~~~~~l~~~-ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~ 335 (403)
T 3ot5_A 269 ---AVREKAMAILGGHERIHLIE----PLDAIDFHNFLRK-SYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEG 335 (403)
T ss_dssp ---HHHHHHHHHHTTCTTEEEEC----CCCHHHHHHHHHH-EEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHH
T ss_pred ---HHHHHHHHHhCCCCCEEEeC----CCCHHHHHHHHHh-cCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhh
Confidence 12222222 34457899998 5666789999995 99999998 44448999999999999 78888898
Q ss_pred cccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Q 003987 704 IEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGG 746 (781)
Q Consensus 704 I~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a 746 (781)
++.| +|+++++ |++++++++.+++ .|++.+++|++++
T Consensus 336 v~~g-~~~lv~~-d~~~l~~ai~~ll----~~~~~~~~m~~~~ 372 (403)
T 3ot5_A 336 IEAG-TLKLIGT-NKENLIKEALDLL----DNKESHDKMAQAA 372 (403)
T ss_dssp HHHT-SEEECCS-CHHHHHHHHHHHH----HCHHHHHHHHHSC
T ss_pred eeCC-cEEEcCC-CHHHHHHHHHHHH----cCHHHHHHHHhhc
Confidence 8766 8999976 9999999998887 7999999988654
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.8e-14 Score=158.21 Aligned_cols=158 Identities=10% Similarity=0.033 Sum_probs=106.9
Q ss_pred CCCCEEEEEeeccCCCC--hHHHHHHHHHhhccCCCeEEEE-EeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003987 570 RSKPIVFSMARLDHVKN--MTGLVECYGKNSQLRELVNLVV-VAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kg--l~~LieA~~~l~~~~~~v~LvI-VG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~fl 646 (781)
..+.++++.|++...++ +..++++++ + .+ +++++ +|++.+ .+.+. .+.++|++.
T Consensus 246 ~~~~v~v~~Gs~~~~~~~~~~~~~~al~---~-~~-~~~v~~~g~~~~------------~~~l~------~~~~~v~~~ 302 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDRPGFFRDCARAFD---G-QP-WHVVMTLGGQVD------------PAALG------DLPPNVEAH 302 (415)
T ss_dssp CCCEEEEECTTTSCCCHHHHHHHHHHHT---T-SS-CEEEEECTTTSC------------GGGGC------CCCTTEEEE
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHHh---c-CC-cEEEEEeCCCCC------------hHHhc------CCCCcEEEE
Confidence 34556778898865432 333344333 2 23 77777 454433 11111 356789999
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----CccccccccccCCeEEEECCC--CHHH
Q 003987 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEIIEHGASGFHIDPY--HPDQ 720 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI~dg~~G~lv~p~--d~~~ 720 (781)
|+ ++.. .+++ .+|++|..+- ..|+.|||++|+|+|+. +....++.+.+.+.|..+++. ++++
T Consensus 303 ~~----~~~~---~ll~-~ad~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~ 370 (415)
T 3rsc_A 303 RW----VPHV---KVLE-QATVCVTHGG----MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDT 370 (415)
T ss_dssp SC----CCHH---HHHH-HEEEEEESCC----HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHH
T ss_pred ec----CCHH---HHHh-hCCEEEECCc----HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHH
Confidence 84 4443 5566 5999998752 36899999999999994 555677788888899999876 8899
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 721 lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
++++|.+++ .|++.++++++.+.+.. +...+ ..+++..++++
T Consensus 371 l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~i~~~~ 412 (415)
T 3rsc_A 371 LLAAVGAVA----ADPALLARVEAMRGHVR-RAGGA--ARAADAVEAYL 412 (415)
T ss_dssp HHHHHHHHH----TCHHHHHHHHHHHHHHH-HSCHH--HHHHHHHHHHH
T ss_pred HHHHHHHHH----cCHHHHHHHHHHHHHHH-hcCHH--HHHHHHHHHHh
Confidence 999998887 89999999988776654 44444 34445555554
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.7e-14 Score=158.57 Aligned_cols=139 Identities=15% Similarity=0.129 Sum_probs=104.3
Q ss_pred CCEEEEEeeccCC-------CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEE
Q 003987 572 KPIVFSMARLDHV-------KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFR 644 (781)
Q Consensus 572 k~iIl~vGRL~~~-------Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~ 644 (781)
..+++++|++... +.+..+++++++. ++++++++++.. .+.+. . ++++|+
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~------------~~~l~----~--~~~~v~ 267 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVELIVAAPDTV------------AEALR----A--EVPQAR 267 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCEEEEECCHHH------------HHHHH----H--HCTTSE
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcEEEEEeCCCC------------HHhhC----C--CCCceE
Confidence 4578899999875 5677788887653 578888776532 22222 1 357899
Q ss_pred EeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCCeEEEECCC--CH
Q 003987 645 WIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HP 718 (781)
Q Consensus 645 flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG----~~EiI~dg~~G~lv~p~--d~ 718 (781)
+ |+ ++..+ +++ .+|+||..+ -+.|++|||++|+|+|++..++ .++.+++.+.|+.+++. ++
T Consensus 268 ~-~~----~~~~~---~l~-~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~ 334 (384)
T 2p6p_A 268 V-GW----TPLDV---VAP-TCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDST 334 (384)
T ss_dssp E-EC----CCHHH---HGG-GCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCH
T ss_pred E-cC----CCHHH---HHh-hCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCH
Confidence 9 94 44444 456 599999974 3569999999999999997643 67777777889999875 78
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
++++++|.+++ .|+++++++++.+.+..
T Consensus 335 ~~l~~~i~~ll----~~~~~~~~~~~~~~~~~ 362 (384)
T 2p6p_A 335 EAIADSCQELQ----AKDTYARRAQDLSREIS 362 (384)
T ss_dssp HHHHHHHHHHH----HCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH----cCHHHHHHHHHHHHHHH
Confidence 99999998887 79999998888776554
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.46 E-value=5.8e-13 Score=149.62 Aligned_cols=158 Identities=13% Similarity=0.116 Sum_probs=112.2
Q ss_pred CCEEEEEeeccC-----CCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003987 572 KPIVFSMARLDH-----VKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 572 k~iIl~vGRL~~-----~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~fl 646 (781)
..++++.|++.. .|.+..++++++++ ++++++++++.. .+.+. ++.++|++.
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~------------~~~l~------~~~~~v~~~ 324 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQQ------------LEGVA------NIPDNVRTV 324 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTTT------------TSSCS------SCCSSEEEC
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCcc------------hhhhc------cCCCCEEEe
Confidence 447788999875 48888999998764 478888777644 11110 356789999
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCCeEEEECCC--CHHH
Q 003987 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEHGASGFHIDPY--HPDQ 720 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g----G~~EiI~dg~~G~lv~p~--d~~~ 720 (781)
| .++..++ +. ++|++|.. +-+.|+.|||++|+|+|+...+ +.++.+++.+.|+.+++. ++++
T Consensus 325 ~----~~~~~~l---l~-~ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~ 392 (441)
T 2yjn_A 325 G----FVPMHAL---LP-TCAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQ 392 (441)
T ss_dssp C----SCCHHHH---GG-GCSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHH
T ss_pred c----CCCHHHH---Hh-hCCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHH
Confidence 9 4454444 55 59999985 3467999999999999999764 366777777899999876 8899
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003987 721 AAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 721 lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
++++|.+++ .|+++++++++.+.+.. +...+ ..+++..++++..
T Consensus 393 l~~~i~~ll----~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~i~~~~~~ 436 (441)
T 2yjn_A 393 LRESVKRVL----DDPAHRAGAARMRDDML-AEPSP--AEVVGICEELAAG 436 (441)
T ss_dssp HHHHHHHHH----HCHHHHHHHHHHHHHHH-TSCCH--HHHHHHHHHHHHC
T ss_pred HHHHHHHHh----cCHHHHHHHHHHHHHHH-cCCCH--HHHHHHHHHHHHh
Confidence 999998887 79999999988776654 34443 3555666666644
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.2e-12 Score=145.33 Aligned_cols=263 Identities=11% Similarity=0.075 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHH
Q 003987 390 ETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADL 469 (781)
Q Consensus 390 ~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~ 469 (781)
......+.+.+.+. +||+|+++.......+.+.|++.|+|++....++ .+ + +..+ .+. ....
T Consensus 80 ~~~~~~l~~~l~~~---kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl-rs-~---~~~~--pee--------~nR~ 141 (385)
T 4hwg_A 80 GLVIEKVDEVLEKE---KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN-RC-F---DQRV--PEE--------INRK 141 (385)
T ss_dssp HHHHHHHHHHHHHH---CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC-CC-S---CTTS--THH--------HHHH
T ss_pred HHHHHHHHHHHHhc---CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC-cc-c---cccC--cHH--------HHHH
Confidence 33444555555555 9999999876543334788899999965443322 11 0 0000 000 0111
Q ss_pred HHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCC-CcCCCCCCCcHHHHHHhhhhc
Q 003987 470 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG-ADMDIYFPYSEKQKRLTALHG 548 (781)
Q Consensus 470 ~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnG-vD~~~f~p~~~~~~r~~~~~~ 548 (781)
..-..+|.+++.|+...+.+. ..|++ ..++.++.|. +|...+.. . ..
T Consensus 142 ~~~~~a~~~~~~te~~~~~l~--------------------~~G~~--~~~I~vtGnp~~D~~~~~~--~---~~----- 189 (385)
T 4hwg_A 142 IIDHISDVNITLTEHARRYLI--------------------AEGLP--AELTFKSGSHMPEVLDRFM--P---KI----- 189 (385)
T ss_dssp HHHHHCSEEEESSHHHHHHHH--------------------HTTCC--GGGEEECCCSHHHHHHHHH--H---HH-----
T ss_pred HHHhhhceeecCCHHHHHHHH--------------------HcCCC--cCcEEEECCchHHHHHHhh--h---hc-----
Confidence 233568999999987654211 12443 5688888863 34211100 0 00
Q ss_pred chhhhccCccccccccCCCCCCCCCEEEEEeecc---CCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHH
Q 003987 549 SIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD---HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIA 625 (781)
Q Consensus 549 ~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~---~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~ 625 (781)
...+.++.+|+ ++++.++++.+|.. ..|++..+++|+.++.+.. ++.+++..+ +
T Consensus 190 -------~~~~~~~~lgl--~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~-~~~vv~p~~-p------------ 246 (385)
T 4hwg_A 190 -------LKSDILDKLSL--TPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEY-NFLIIFSTH-P------------ 246 (385)
T ss_dssp -------HHCCHHHHTTC--CTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHH-CCEEEEEEC-H------------
T ss_pred -------chhHHHHHcCC--CcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcC-CeEEEEECC-h------------
Confidence 01123345776 34444566677643 4478999999999987644 577776543 2
Q ss_pred HHHHHHHHHHHc-C-C--CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc-cc
Q 003987 626 EIEKMHELMKTY-K-L--DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG-GP 700 (781)
Q Consensus 626 ~~~~l~~li~el-g-L--~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g-G~ 700 (781)
.+++.++++ + + .++|++++ ++...++..+++. +|+++.+| |....|||++|+|+|..+.. +.
T Consensus 247 ---~~~~~l~~~~~~~~~~~~v~l~~----~lg~~~~~~l~~~-adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter 313 (385)
T 4hwg_A 247 ---RTKKRLEDLEGFKELGDKIRFLP----AFSFTDYVKLQMN-AFCILSDS-----GTITEEASILNLPALNIREAHER 313 (385)
T ss_dssp ---HHHHHHHTSGGGGGTGGGEEECC----CCCHHHHHHHHHH-CSEEEECC-----TTHHHHHHHTTCCEEECSSSCSC
T ss_pred ---HHHHHHHHHHHHhcCCCCEEEEc----CCCHHHHHHHHHh-CcEEEECC-----ccHHHHHHHcCCCEEEcCCCccc
Confidence 134445554 3 2 46899987 5666788888995 99999887 55679999999999998543 46
Q ss_pred ccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHH
Q 003987 701 AEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISD 744 (781)
Q Consensus 701 ~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~ 744 (781)
.|.++.| ++.++.+ |++++++++.+++ .|+..+++|++
T Consensus 314 ~e~v~~G-~~~lv~~-d~~~i~~ai~~ll----~d~~~~~~m~~ 351 (385)
T 4hwg_A 314 PEGMDAG-TLIMSGF-KAERVLQAVKTIT----EEHDNNKRTQG 351 (385)
T ss_dssp THHHHHT-CCEECCS-SHHHHHHHHHHHH----TTCBTTBCCSC
T ss_pred hhhhhcC-ceEEcCC-CHHHHHHHHHHHH----hChHHHHHhhc
Confidence 6777666 6777754 8999999998887 67666555544
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=99.40 E-value=3.6e-12 Score=150.10 Aligned_cols=331 Identities=15% Similarity=0.046 Sum_probs=206.9
Q ss_pred CceEEEEcCCCchHHHH-HHHHH--------------cCCcEEEEecCCcccCC---CCC-------h-------hhHhh
Q 003987 407 FPDFIIGNYSDGNLVAS-LLAYK--------------MGITQCTIAHALEKTKY---PDS-------D-------IYWKK 454 (781)
Q Consensus 407 kpDIIh~~~~~~~lva~-llar~--------------~gvp~v~t~H~l~~~k~---~~s-------~-------~~~k~ 454 (781)
+||+||+|.+.++++.. ++... .+.+.++|.|++-+... +.. . +.+..
T Consensus 289 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~ 368 (796)
T 2c4m_A 289 EFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRF 368 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHHH
Confidence 69999999999876555 44222 35678999999866542 100 0 00000
Q ss_pred hh-------------c-cccchhhhhHHHHHHhhCCEEEecCHHHHhhcccc-ccccccccccccccceeeeccCCCCCC
Q 003987 455 FD-------------E-KYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNT-VGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 455 ~~-------------~-~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~-v~qyes~~~f~l~~ly~v~~gi~~f~~ 519 (781)
+. . ...+-.++.--..++..++.|-++|..-.+-+++. ++ ++++ ..+.
T Consensus 369 ~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~-----------~~~~------~~p~ 431 (796)
T 2c4m_A 369 RLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKAETLA-----------DWYA------LWPE 431 (796)
T ss_dssp HHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTH-----------HHHH------HCGG
T ss_pred HHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhhhhhh-----------hHHH------cCcc
Confidence 00 0 00001123334568889999999998776655532 11 1221 2256
Q ss_pred ceEEecCCCcCCCCCC--CcHHHHHHhhhhc------------c----hh------hh----ccCccc----cccccCCC
Q 003987 520 KFNIVSPGADMDIYFP--YSEKQKRLTALHG------------S----IE------QL----LFDPEQ----NDEHVGTL 567 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p--~~~~~~r~~~~~~------------~----i~------~~----l~~~~~----~~~~~g~l 567 (781)
|++-|.||||...+-. .+.....+..... . ++ ++ ..++.. .+++.|+.
T Consensus 432 kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~ 511 (796)
T 2c4m_A 432 KFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIE 511 (796)
T ss_dssp GEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred ccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8999999999998832 1221111111000 0 00 01 111122 24556887
Q ss_pred CCCCCCEEEEEeeccCCCChHH-HHHHHHHhhc--cC-----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH----
Q 003987 568 SDRSKPIVFSMARLDHVKNMTG-LVECYGKNSQ--LR-----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK---- 635 (781)
Q Consensus 568 ~~~~k~iIl~vGRL~~~Kgl~~-LieA~~~l~~--~~-----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~---- 635 (781)
.+++.+.++++.|+..+|+.+. ++..+.++.+ .. ..+++++.|.+.. .+......++.+.++++
T Consensus 512 vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P----~y~~aK~iIk~i~~va~~in~ 587 (796)
T 2c4m_A 512 IDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAP----GYVRAKAIIKLINSIADLVNN 587 (796)
T ss_dssp CCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCT----TCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCH----hHHHHHHHHHHHHHHHHHhcc
Confidence 7889999999999999999999 7887776653 21 2588988888865 23344445555666665
Q ss_pred HcCCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc--CCe
Q 003987 636 TYKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--GAS 709 (781)
Q Consensus 636 elgL~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d--g~~ 709 (781)
.-...+ +|.|+. .. +..+.+.+..++|++.+||. +|++|+.=+=||..|.++|.|-.|...|+.++ .+|
T Consensus 588 dp~~~~~lKVvFl~----nY-~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~N 662 (796)
T 2c4m_A 588 DPEVSPLLKVVFVE----NY-NVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEEN 662 (796)
T ss_dssp CTTTTTTEEEEEET----TC-CHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGG
T ss_pred ccccCCceEEEEEC----CC-CHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCc
Confidence 113457 788885 23 44566666667999999999 99999999999999999999998999888765 469
Q ss_pred EEEECC--CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchh-hhccchHHH
Q 003987 710 GFHIDP--YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSD-GIVDPSPFV 768 (781)
Q Consensus 710 G~lv~p--~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~-~il~~ye~l 768 (781)
||+|.. .++.++-.. .+..+....+| .++++-+.+.. ..|||... ...++|..+
T Consensus 663 gF~FG~~~~ev~~l~~~-y~a~~~y~~~~-~~~~vvd~~~~---g~fs~~~~~~y~~Ly~~L 719 (796)
T 2c4m_A 663 AYIFGARVEELPALRES-YKPYELYETVP-GLKRALDALDN---GTLNDNNSGLFYDLKHSL 719 (796)
T ss_dssp SEEESCCTTTHHHHHHT-CCHHHHHHHST-THHHHHHTTTS---SSSCCTTCCHHHHHHHHH
T ss_pred EEEecCchhhHHHHHHh-hChHHHhhcCH-HHHHHHHHHHc---CCCCCCCHHHHHHHHHHH
Confidence 999976 677776554 33333333555 45555555543 67999764 333444444
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=6.8e-12 Score=147.78 Aligned_cols=333 Identities=12% Similarity=0.006 Sum_probs=207.3
Q ss_pred CceEEEEcCCCchHHHH-HHHHH--------------cCCcEEEEecCCcccCC---CCC-------hhhH--hhhhc--
Q 003987 407 FPDFIIGNYSDGNLVAS-LLAYK--------------MGITQCTIAHALEKTKY---PDS-------DIYW--KKFDE-- 457 (781)
Q Consensus 407 kpDIIh~~~~~~~lva~-llar~--------------~gvp~v~t~H~l~~~k~---~~s-------~~~~--k~~~~-- 457 (781)
+||+||+|.+.++++.. ++... .+.+.++|.|++-+... +.. .... ..+..
T Consensus 299 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~f 378 (796)
T 1l5w_A 299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRF 378 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHHhHHHHHHHhccCHHH
Confidence 69999999999876555 34222 47889999999866542 100 0000 00000
Q ss_pred ------------------cccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCC
Q 003987 458 ------------------KYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDP 519 (781)
Q Consensus 458 ------------------~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~ 519 (781)
...+-.++.--..++..++.|-++|..-.+-+++.. .++++ ..++.
T Consensus 379 ~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~----------f~~~~------~~~p~ 442 (796)
T 1l5w_A 379 KTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDL----------FPEYH------QLWPN 442 (796)
T ss_dssp HHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTT----------SHHHH------HHCGG
T ss_pred HHHHHHhcCCcHHHHhhhhcccCCcccHHHHHHHhcCccccccHHHHHHHHhHH----------hhHHH------HhCcc
Confidence 000001233344678899999999987766554321 01122 12356
Q ss_pred ceEEecCCCcCCCCCC--CcHHHHHHh---------------hhhcchh------hh----ccCccc----cccccCCCC
Q 003987 520 KFNIVSPGADMDIYFP--YSEKQKRLT---------------ALHGSIE------QL----LFDPEQ----NDEHVGTLS 568 (781)
Q Consensus 520 k~~VIpnGvD~~~f~p--~~~~~~r~~---------------~~~~~i~------~~----l~~~~~----~~~~~g~l~ 568 (781)
|++-|.||||...+-. .+.....+. ++.+-++ ++ ..++.. .+++.|+..
T Consensus 443 k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~v 522 (796)
T 1l5w_A 443 KFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEI 522 (796)
T ss_dssp GEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred ccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 8999999999877621 111111111 0000000 01 111111 234578877
Q ss_pred CCCCCEEEEEeeccCCCChHH-HHHHHHHhhc--cC-----CCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHH----H
Q 003987 569 DRSKPIVFSMARLDHVKNMTG-LVECYGKNSQ--LR-----ELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMK----T 636 (781)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgl~~-LieA~~~l~~--~~-----~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~----e 636 (781)
+++.+.++++.|+..+|+.+. ++..+.++.+ .. ..+++++.|.+.. .+......++.+.++++ .
T Consensus 523 dpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P----~y~~aK~iIk~i~~va~~in~D 598 (796)
T 1l5w_A 523 NPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVADVINND 598 (796)
T ss_dssp CTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCT----TCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCCh----hHHHHHHHHHHHHHHHHHhccc
Confidence 889999999999999999999 7777766643 11 2488988888865 23344444555666665 1
Q ss_pred cCCCC--cEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc--CCeE
Q 003987 637 YKLDG--QFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH--GASG 710 (781)
Q Consensus 637 lgL~~--~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d--g~~G 710 (781)
-...+ +|.|+. .. +..+.+.+..++|++.+||. +|++|+.=+=||..|.++|.|-.|...|+.++ .+||
T Consensus 599 p~~~~~lKVvfl~----nY-~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~Ng 673 (796)
T 1l5w_A 599 PLVGDKLKVVFLP----DY-CVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENI 673 (796)
T ss_dssp TTTGGGEEEEECS----SC-CHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGS
T ss_pred cccCCceEEEEEC----CC-CHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccCCCcE
Confidence 13456 788885 23 44566666667999999999 99999999999999999999999999998765 4699
Q ss_pred EEECCCCHHHHHHH---HHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhc
Q 003987 711 FHIDPYHPDQAAEL---MADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 711 ~lv~p~d~~~lA~~---I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~ 772 (781)
|+|.. +++++.+. ..+..+....+| .++++-+.+.. ..|||... ..|+.+++.+
T Consensus 674 F~FG~-~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~~~~---g~fs~~~~---~~y~~Ly~~L 730 (796)
T 1l5w_A 674 FIFGH-TVEQVKAILAKGYDPVKWRKKDK-VLDAVLKELES---GKYSDGDK---HAFDQMLHSI 730 (796)
T ss_dssp EECSC-CHHHHHHHHHHCCCHHHHHHHCH-HHHHHHHHHHH---TTTTTTCT---TTTHHHHHHT
T ss_pred EEecC-CHHHHHHHHHcccCHHHHhhcCH-HHHHHHHHHHc---CCCCCCcH---HHHHHHHHHH
Confidence 99987 77776632 211222223566 46666665543 67999763 4466666554
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=3.3e-11 Score=134.01 Aligned_cols=137 Identities=12% Similarity=0.087 Sum_probs=97.7
Q ss_pred CCCCEEEEEeecc-CCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003987 570 RSKPIVFSMARLD-HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 570 ~~k~iIl~vGRL~-~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~ 648 (781)
..++++++.|++. ..+.+..+++++++. +++++++++.... +..++.++|++.+
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~vv~~~g~~~~-------------------~~~~~~~~v~~~~- 274 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRRVVLSSGWAGL-------------------GRIDEGDDCLVVG- 274 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCCEEEECTTTTC-------------------CCSSCCTTEEEES-
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCEEEEEeCCccc-------------------ccccCCCCEEEec-
Confidence 3466788899998 677778888888765 3667777665431 0123468899998
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCCeEEEECCC--CHHHHH
Q 003987 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HPDQAA 722 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG----~~EiI~dg~~G~lv~p~--d~~~lA 722 (781)
.++..++. . .+|++|..+- ..|+.|||++|+|+|+...++ ..+.+++.+.|..+++. +.++++
T Consensus 275 ---~~~~~~ll---~-~~d~~v~~gG----~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~ 343 (404)
T 3h4t_A 275 ---EVNHQVLF---G-RVAAVVHHGG----AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLS 343 (404)
T ss_dssp ---SCCHHHHG---G-GSSEEEECCC----HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHH
T ss_pred ---CCCHHHHH---h-hCcEEEECCc----HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHH
Confidence 45555544 4 5999998752 379999999999999975543 34456666789888754 789999
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHH
Q 003987 723 ELMADFFGKCKENPSHWKKISDGGL 747 (781)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~~s~~a~ 747 (781)
++|.+++ . +++++++++.+.
T Consensus 344 ~ai~~ll----~-~~~~~~~~~~~~ 363 (404)
T 3h4t_A 344 AALATAL----T-PGIRARAAAVAG 363 (404)
T ss_dssp HHHHHHT----S-HHHHHHHHHHHT
T ss_pred HHHHHHh----C-HHHHHHHHHHHH
Confidence 9998776 6 887777666543
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.7e-10 Score=128.46 Aligned_cols=143 Identities=13% Similarity=0.088 Sum_probs=97.4
Q ss_pred CCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEE-EEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003987 570 RSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLV-VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 570 ~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~Lv-IVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~ 648 (781)
+.+.++++.|++. .+....+.+++..+.+ .+++++ ++|.+.+ .+.+ -.++++|++.++
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~--~~~~~~~~~g~~~~------------~~~~------~~~~~~v~~~~~ 312 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDG--LDWHVVLSVGRFVD------------PADL------GEVPPNVEVHQW 312 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHTT--CSSEEEEECCTTSC------------GGGG------CSCCTTEEEESS
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHhc--CCcEEEEEECCcCC------------hHHh------ccCCCCeEEecC
Confidence 3455678889987 3343444444444433 356774 4566543 1111 125678999994
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCCeEEEECCC--CHHHHH
Q 003987 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEHGASGFHIDPY--HPDQAA 722 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g----G~~EiI~dg~~G~lv~p~--d~~~lA 722 (781)
++.. .+++ .+|++|..+ -..+++|||++|+|+|+.... ..++.+.+.+.|..+++. ++++++
T Consensus 313 ----~~~~---~~l~-~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~ 380 (424)
T 2iya_A 313 ----VPQL---DILT-KASAFITHA----GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLR 380 (424)
T ss_dssp ----CCHH---HHHT-TCSEEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHH
T ss_pred ----CCHH---HHHh-hCCEEEECC----chhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHH
Confidence 4433 4666 599999863 247999999999999999654 345566677789998765 889999
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHH
Q 003987 723 ELMADFFGKCKENPSHWKKISDGGLKR 749 (781)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~~s~~a~~~ 749 (781)
++|.+++ .|++.++++++.+.+.
T Consensus 381 ~~i~~ll----~~~~~~~~~~~~~~~~ 403 (424)
T 2iya_A 381 EAVLAVA----SDPGVAERLAAVRQEI 403 (424)
T ss_dssp HHHHHHH----HCHHHHHHHHHHHHHH
T ss_pred HHHHHHH----cCHHHHHHHHHHHHHH
Confidence 9998887 7998888887766553
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=99.32 E-value=2e-11 Score=144.21 Aligned_cols=261 Identities=10% Similarity=0.022 Sum_probs=171.0
Q ss_pred hhHHHHHHhhCCEEEecCHHHHhhcccc-ccccccccccccccceeeeccCCCCCCceEEecCCCcCCCC----CCCcHH
Q 003987 465 FTADLIAMNNADFIITSTYQEIAGTKNT-VGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIY----FPYSEK 539 (781)
Q Consensus 465 ~~~e~~a~~~AD~IIt~S~~~~~~~k~~-v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f----~p~~~~ 539 (781)
+.--..++..++.|-++|..-.+-+++. ++ ++|+ ....|++-|.||||...+ .|...
T Consensus 428 vnMa~lai~~S~~VNgVS~lH~e~ik~~~f~-----------~~~~------~~p~k~~~iTNGI~~rrWl~~~NP~l~- 489 (824)
T 2gj4_A 428 INMAHLCIAGSHAVNGVARIHSEILKKTIFK-----------DFYE------LEPHKFQNKTNGITPRRWLVLCNPGLA- 489 (824)
T ss_dssp EEHHHHHHHTCSCEEESSHHHHHHHHHTTTH-----------HHHH------HCGGGEEECCCCBCTCCCCCCTCHHHH-
T ss_pred ccHHHHHHHhcCceeeEcHHHHHHHhhHHhH-----------HHHH------cChhhcccccCCcChhhhcccCCHhHH-
Confidence 3334568899999999998766655422 22 1221 125689999999999988 33211
Q ss_pred HHHHhh---------------hhc-----ch-----hhhccCccc----cccccCCCCCCCCCEEEEEeeccCCCChHHH
Q 003987 540 QKRLTA---------------LHG-----SI-----EQLLFDPEQ----NDEHVGTLSDRSKPIVFSMARLDHVKNMTGL 590 (781)
Q Consensus 540 ~~r~~~---------------~~~-----~i-----~~~l~~~~~----~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~L 590 (781)
..+.. +.+ .+ +-...++.. ..+..|+..+++.+.++++.|+..+|+.+.+
T Consensus 490 -~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~ 568 (824)
T 2gj4_A 490 -EIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLN 568 (824)
T ss_dssp -HHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHH
T ss_pred -HHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhH
Confidence 11110 000 01 000111111 3345788778899999999999999999997
Q ss_pred -HHHHHHhhc--cCC-----CeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC----CCC--cEEEeccccCcCChH
Q 003987 591 -VECYGKNSQ--LRE-----LVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK----LDG--QFRWIAAQTNRARNG 656 (781)
Q Consensus 591 -ieA~~~l~~--~~~-----~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elg----L~~--~V~flG~~~~~v~~~ 656 (781)
+..+.++.+ ..| ++++++.|.+.. .+...+..++.+.++++.++ +.+ +|.|+. .. +.
T Consensus 569 ~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P----~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~----nY-dv 639 (824)
T 2gj4_A 569 CLHVITLYNRIKKEPNKFVVPRTVMIGGKAAP----GYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLE----NY-RV 639 (824)
T ss_dssp HHHHHHHHHHHHHCTTSCCCCEEEEEECCCCT----TCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEET----TC-CH
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCH----hHHHHHHHHHHHHHHHHHhccCcccCCceEEEEEC----CC-CH
Confidence 777666631 122 578988888865 24444555666777777653 345 788885 23 44
Q ss_pred HHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCccccccccc--cCCeEEEECCCCHHHHHHHHH----HH
Q 003987 657 ELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIE--HGASGFHIDPYHPDQAAELMA----DF 728 (781)
Q Consensus 657 el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~--dg~~G~lv~p~d~~~lA~~I~----~~ 728 (781)
.+.+.+..++|++.+||. +|++|++=+=||..|.++|+|-.|...|+.+ ..+|||+|... ++++ ..+. +.
T Consensus 640 slA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~-~~ev-~~l~~~~~~a 717 (824)
T 2gj4_A 640 SLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMR-VEDV-DRLDQRGYNA 717 (824)
T ss_dssp HHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCC-HHHH-HHHHHHCCCH
T ss_pred HHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeCCc-HHHH-HHHHHcCCCH
Confidence 566666667999999999 9999999999999999999999898888865 46689999875 6666 4441 11
Q ss_pred HHhccCCHHHHHHHHHHHHHHHHHhcCcchh
Q 003987 729 FGKCKENPSHWKKISDGGLKRIYERLVVSSD 759 (781)
Q Consensus 729 l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~ 759 (781)
.+....++ .|+++-+... ...|+|...
T Consensus 718 ~~~Y~~~~-~l~~v~d~i~---~g~fs~~~~ 744 (824)
T 2gj4_A 718 QEYYDRIP-ELRQIIEQLS---SGFFSPKQP 744 (824)
T ss_dssp HHHHHHCH-HHHHHHHHHH---HTTTCTTST
T ss_pred HHHhcCCH-HHHHHHHHHH---hCCCCCCCh
Confidence 11112344 4455544443 467999764
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.31 E-value=4.6e-11 Score=138.19 Aligned_cols=186 Identities=10% Similarity=-0.010 Sum_probs=133.2
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEE--EEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCC
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLV--VVAGYIDVNKSKDREEIAEIEKMHELMKTYKLD 640 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~Lv--IVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~ 640 (781)
.+|++.+.+.+++++.+++ .|....++++++++.+..|+..|+ ++|++..+ ...+.+.+.+.|+.
T Consensus 432 ~~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~-----------~~~~~~~~~~~GI~ 498 (631)
T 3q3e_A 432 DYLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGI-----------THPYVERFIKSYLG 498 (631)
T ss_dssp CCCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGG-----------GHHHHHHHHHHHHG
T ss_pred cccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchh-----------hHHHHHHHHHcCCC
Confidence 3566322335667777764 788999999999999888887775 35643220 11222334567888
Q ss_pred CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccc------cCCeEEEEC
Q 003987 641 GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIE------HGASGFHID 714 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~------dg~~G~lv~ 714 (781)
++|.|.| ..+..+....++. +|+++-|+.+.| |+|.+|||+||+|||+...++...-+. -|..++++.
T Consensus 499 ~Rv~F~g----~~p~~e~la~y~~-aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA 572 (631)
T 3q3e_A 499 DSATAHP----HSPYHQYLRILHN-CDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA 572 (631)
T ss_dssp GGEEEEC----CCCHHHHHHHHHT-CSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE
T ss_pred ccEEEcC----CCCHHHHHHHHhc-CcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec
Confidence 8999999 6777888888895 999999998765 999999999999999976555554442 244444232
Q ss_pred CCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH--hcCcchhhhccchHHHHHhc
Q 003987 715 PYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYE--RLVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 715 p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~--~ysw~~~~il~~ye~ll~~~ 772 (781)
.|.++++++..++. .|++.+++++++.+++... -|+.....+.+.|+++++.+
T Consensus 573 -~d~eeYv~~Av~La----~D~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~~w 627 (631)
T 3q3e_A 573 -NTVDEYVERAVRLA----ENHQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLNAF 627 (631)
T ss_dssp -SSHHHHHHHHHHHH----HCHHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHh----CCHHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHHHH
Confidence 27999999998877 8999999999999988655 45533345556666666654
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.25 E-value=3.6e-10 Score=125.81 Aligned_cols=136 Identities=11% Similarity=0.026 Sum_probs=95.4
Q ss_pred CCCEEEEEeec-cCCCChHHHHHHHHHhhccCCCeEEEEE-eCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003987 571 SKPIVFSMARL-DHVKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 571 ~k~iIl~vGRL-~~~Kgl~~LieA~~~l~~~~~~v~LvIV-G~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~ 648 (781)
...++++.|++ ...|.+..++++++++. .+++++ |.+.. . ...+.++|++.|
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~~-----~~~v~~~g~~~~--------------~------~~~~~~~v~~~~- 291 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAHG-----RRVILSRGWADL--------------V------LPDDGADCFAIG- 291 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHTT-----CCEEECTTCTTC--------------C------CSSCGGGEEECS-
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHCC-----CeEEEEeCCCcc--------------c------ccCCCCCEEEeC-
Confidence 35678889999 58888888899987752 455555 55432 0 013457899998
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCCeEEEECCC--CHHHHH
Q 003987 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHIDPY--HPDQAA 722 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG----~~EiI~dg~~G~lv~p~--d~~~lA 722 (781)
.++..++ +. ++|+||..+ -..|+.|||++|+|+|+....+ .++.+++.+.|..+++. +.++++
T Consensus 292 ---~~~~~~~---l~-~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~ 360 (415)
T 1iir_A 292 ---EVNHQVL---FG-RVAAVIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLS 360 (415)
T ss_dssp ---SCCHHHH---GG-GSSEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHH
T ss_pred ---cCChHHH---Hh-hCCEEEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHH
Confidence 4555555 45 699999864 2369999999999999986544 56667777789998754 788888
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHH
Q 003987 723 ELMADFFGKCKENPSHWKKISDGGLK 748 (781)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~~s~~a~~ 748 (781)
++|.+ + .|++.++++.+.+.+
T Consensus 361 ~~i~~----l-~~~~~~~~~~~~~~~ 381 (415)
T 1iir_A 361 AALAT----A-LTPETHARATAVAGT 381 (415)
T ss_dssp HHHHH----H-TSHHHHHHHHHHHHH
T ss_pred HHHHH----H-cCHHHHHHHHHHHHH
Confidence 88854 4 678887776665543
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.21 E-value=5e-10 Score=124.58 Aligned_cols=135 Identities=11% Similarity=-0.015 Sum_probs=94.4
Q ss_pred CCCEEEEEeecc---CCCChHHHHHHHHHhhccCCCeEEEEE-eCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEe
Q 003987 571 SKPIVFSMARLD---HVKNMTGLVECYGKNSQLRELVNLVVV-AGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWI 646 (781)
Q Consensus 571 ~k~iIl~vGRL~---~~Kgl~~LieA~~~l~~~~~~v~LvIV-G~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~fl 646 (781)
.+.++++.|++. ..|.+..++++++++ +++++++ |.+.. + . ..++++|++.
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~-------------~-~------~~~~~~v~~~ 291 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRRVILSRGWTEL-------------V-L------PDDRDDCFAI 291 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCCEEEECTTTTC-------------C-C------SCCCTTEEEE
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC-----CCeEEEEeCCccc-------------c-c------cCCCCCEEEe
Confidence 356788889985 467777788888765 3556665 54422 0 0 1356789999
Q ss_pred ccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCCeEEEECC--CCHHH
Q 003987 647 AAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEHGASGFHIDP--YHPDQ 720 (781)
Q Consensus 647 G~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g----G~~EiI~dg~~G~lv~p--~d~~~ 720 (781)
+ .++..++ +. ++|++|.-+ -..|+.|||++|+|+|+.... ..++.+++.+.|..++. .+.++
T Consensus 292 ~----~~~~~~l---l~-~~d~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~ 359 (416)
T 1rrv_A 292 D----EVNFQAL---FR-RVAAVIHHG----SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFES 359 (416)
T ss_dssp S----SCCHHHH---GG-GSSEEEECC----CHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHH
T ss_pred c----cCChHHH---hc-cCCEEEecC----ChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHH
Confidence 8 4555554 45 699999843 246999999999999997543 35566777778998865 47888
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHH
Q 003987 721 AAELMADFFGKCKENPSHWKKISDGGL 747 (781)
Q Consensus 721 lA~~I~~~l~~l~~dp~~~~~~s~~a~ 747 (781)
++++|. ++ .|+++++++++.+.
T Consensus 360 l~~~i~----~l-~~~~~~~~~~~~~~ 381 (416)
T 1rrv_A 360 LSAALT----TV-LAPETRARAEAVAG 381 (416)
T ss_dssp HHHHHH----HH-TSHHHHHHHHHHTT
T ss_pred HHHHHH----Hh-hCHHHHHHHHHHHH
Confidence 888885 45 68888877766543
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=6.2e-11 Score=130.27 Aligned_cols=157 Identities=13% Similarity=0.156 Sum_probs=97.5
Q ss_pred CCCEEEEEeeccCCCC-hHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003987 571 SKPIVFSMARLDHVKN-MTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (781)
Q Consensus 571 ~k~iIl~vGRL~~~Kg-l~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~ 649 (781)
..+++++.|++...++ ...+.+++..+.+ .+..+++++++.+.. ....++++|.+.+
T Consensus 237 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~--~~~~~v~~~~~~~~~------------------~~~~~~~~v~~~~-- 294 (400)
T 4amg_A 237 RRRIAVTLGSIDALSGGIAKLAPLFSEVAD--VDAEFVLTLGGGDLA------------------LLGELPANVRVVE-- 294 (400)
T ss_dssp CCEEEECCCSCC--CCSSSTTHHHHHHGGG--SSSEEEEECCTTCCC------------------CCCCCCTTEEEEC--
T ss_pred CcEEEEeCCcccccCccHHHHHHHHHHhhc--cCceEEEEecCcccc------------------ccccCCCCEEEEe--
Confidence 4456777888876543 3444455555544 246666666554411 1124678899998
Q ss_pred cCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----ccccccccccCCeEEEECCCCHHHHHHHH
Q 003987 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEIIEHGASGFHIDPYHPDQAAELM 725 (781)
Q Consensus 650 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~----~gG~~EiI~dg~~G~lv~p~d~~~lA~~I 725 (781)
.++..++ +. .+|+||.- +-..++.|||++|+|+|+.. ....++.+++.+.|..+++. +..+++|
T Consensus 295 --~~p~~~l---L~-~~~~~v~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~--~~~~~al 362 (400)
T 4amg_A 295 --WIPLGAL---LE-TCDAIIHH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAG--SLGAEQC 362 (400)
T ss_dssp --CCCHHHH---HT-TCSEEEEC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTT--TCSHHHH
T ss_pred --ecCHHHH---hh-hhhheecc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCC--CchHHHH
Confidence 5555554 45 59999875 34579999999999999964 33456667776788888754 4467888
Q ss_pred HHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHH
Q 003987 726 ADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFV 768 (781)
Q Consensus 726 ~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~l 768 (781)
.+++ +||+++++..+.+.+.. +.= .....++..|++
T Consensus 363 ~~lL----~d~~~r~~a~~l~~~~~-~~~--~~~~~a~~le~l 398 (400)
T 4amg_A 363 RRLL----DDAGLREAALRVRQEMS-EMP--PPAETAAXLVAL 398 (400)
T ss_dssp HHHH----HCHHHHHHHHHHHHHHH-TSC--CHHHHHHHHHHH
T ss_pred HHHH----cCHHHHHHHHHHHHHHH-cCC--CHHHHHHHHHHh
Confidence 8777 79998877655443322 221 123455555554
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.02 E-value=6.6e-10 Score=108.01 Aligned_cols=134 Identities=11% Similarity=0.099 Sum_probs=100.8
Q ss_pred CCCEEEEEeecc---CCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEec
Q 003987 571 SKPIVFSMARLD---HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIA 647 (781)
Q Consensus 571 ~k~iIl~vGRL~---~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG 647 (781)
.+.+++++|++. ..|++..++++++++ ++++++++++..+ + ++.++|++.|
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~------------~---------~~~~~v~~~~ 74 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI-----PQKVLWRFDGNKP------------D---------TLGLNTRLYK 74 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS-----SSEEEEECCSSCC------------T---------TCCTTEEEES
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC-----CCeEEEEECCcCc------------c---------cCCCcEEEec
Confidence 356788999986 667788888887543 3688888876541 0 2467899999
Q ss_pred cccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCCeEEEECCC--CHHHH
Q 003987 648 AQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEHGASGFHIDPY--HPDQA 721 (781)
Q Consensus 648 ~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g----G~~EiI~dg~~G~lv~p~--d~~~l 721 (781)
.++..++..+ + ++|++|.. +-+.|+.|||++|+|+|++... +.++.+++.+.|+.+++. +++++
T Consensus 75 ----~~~~~~~l~~-~-~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l 144 (170)
T 2o6l_A 75 ----WIPQNDLLGH-P-KTRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDL 144 (170)
T ss_dssp ----SCCHHHHHTS-T-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHH
T ss_pred ----CCCHHHHhcC-C-CcCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHH
Confidence 4555555533 5 59999986 3468999999999999999764 457778888899999877 88999
Q ss_pred HHHHHHHHHhccCCHHHHHHHHH
Q 003987 722 AELMADFFGKCKENPSHWKKISD 744 (781)
Q Consensus 722 A~~I~~~l~~l~~dp~~~~~~s~ 744 (781)
+++|.+++ .|++.++++.+
T Consensus 145 ~~~i~~ll----~~~~~~~~a~~ 163 (170)
T 2o6l_A 145 LNALKRVI----NDPSYKENVMK 163 (170)
T ss_dssp HHHHHHHH----HCHHHHHHHHH
T ss_pred HHHHHHHH----cCHHHHHHHHH
Confidence 99998887 78876555443
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00013 Score=87.01 Aligned_cols=183 Identities=9% Similarity=0.015 Sum_probs=128.7
Q ss_pred cccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCC
Q 003987 560 NDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKL 639 (781)
Q Consensus 560 ~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL 639 (781)
.+..+|+ +.+.+++++..++ .|=-...++.+.++.+..|+.+|++...... ..+.+++.+++.|+
T Consensus 513 ~R~~~gL--p~~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~-----------~~~~l~~~~~~~gi 577 (723)
T 4gyw_A 513 TRSQYGL--PEDAIVYCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAV-----------GEPNIQQYAQNMGL 577 (723)
T ss_dssp EGGGGTC--CTTSEEEECCSCG--GGCCHHHHHHHHHHHHHCSSEEEEEEETTGG-----------GHHHHHHHHHHTTC
T ss_pred chhhcCC--CCCCEEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH-----------HHHHHHHHHHhcCC
Confidence 4566788 5556555555554 4556788888888888889999999876543 14567888899998
Q ss_pred C-CcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcccccc-----cccc-CCeEEE
Q 003987 640 D-GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAE-----IIEH-GASGFH 712 (781)
Q Consensus 640 ~-~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~E-----iI~d-g~~G~l 712 (781)
+ ++|.|.+ ..+..+....+.. +|+++=|--|-| |.|..||+.+|+|||+-....... ++.. |-.-++
T Consensus 578 ~~~r~~f~~----~~~~~~~l~~~~~-~Di~LDt~p~~g-~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~i 651 (723)
T 4gyw_A 578 PQNRIIFSP----VAPKEEHVRRGQL-ADVCLDTPLCNG-HTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELI 651 (723)
T ss_dssp CGGGEEEEE----CCCHHHHHHHGGG-CSEEECCSSSCC-SHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGB
T ss_pred CcCeEEECC----CCCHHHHHHHhCC-CeEEeCCCCcCC-HHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccc
Confidence 4 6899998 5667788888885 999999877655 899999999999999864222111 1110 111222
Q ss_pred ECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHH
Q 003987 713 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVI 769 (781)
Q Consensus 713 v~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll 769 (781)
. .|.++..+...++. .|++.+.++.+.-+++....-=++....++.+|+.+
T Consensus 652 a--~~~~~Y~~~a~~la----~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~ 702 (723)
T 4gyw_A 652 A--KNRQEYEDIAVKLG----TDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLY 702 (723)
T ss_dssp C--SSHHHHHHHHHHHH----HCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHH
T ss_pred c--CCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHH
Confidence 2 48899888887776 899999999998888876644455544444444443
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=97.85 E-value=0.0098 Score=67.30 Aligned_cols=95 Identities=14% Similarity=0.159 Sum_probs=62.4
Q ss_pred CCcEEEeccccCcCChHHHHHHHHc-cCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccc-cCCeEEEE
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIE-HGASGFHI 713 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g----G~~EiI~-dg~~G~lv 713 (781)
.+++...+ +++..+ +++. +.++||.= +=..++.||+++|+|+|+-... ..+..+. +-+.|..+
T Consensus 352 ~~~~~v~~----~~pq~~---~L~h~~~~~~vth----~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l 420 (482)
T 2pq6_A 352 ADRGLIAS----WCPQDK---VLNHPSIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI 420 (482)
T ss_dssp TTTEEEES----CCCHHH---HHTSTTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCCEEEEe----ecCHHH---HhcCCCCCEEEec----CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEE
Confidence 46788887 444443 5542 13446664 2256899999999999997433 3344443 55678888
Q ss_pred CC-CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 714 DP-YHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 714 ~p-~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
+. -+.++++++|.+++ .|++ .+++.+++++..
T Consensus 421 ~~~~~~~~l~~~i~~ll----~~~~-~~~~r~~a~~l~ 453 (482)
T 2pq6_A 421 DTNVKREELAKLINEVI----AGDK-GKKMKQKAMELK 453 (482)
T ss_dssp CSSCCHHHHHHHHHHHH----TSHH-HHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH----cCCc-HHHHHHHHHHHH
Confidence 62 37889999998877 7876 356666665544
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=0.0087 Score=67.82 Aligned_cols=65 Identities=14% Similarity=0.170 Sum_probs=45.2
Q ss_pred HHHHccCc--EEEEcCCCCCCcHHHHHHHHcCCcEEEcCc----ccccccc-ccCCeEEEECCC-----CHHHHHHHHHH
Q 003987 660 RYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEII-EHGASGFHIDPY-----HPDQAAELMAD 727 (781)
Q Consensus 660 ~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVVaT~~----gG~~EiI-~dg~~G~lv~p~-----d~~~lA~~I~~ 727 (781)
.+++ .++ +||.= +=-.+++||+++|+|+|+-.. ...+..+ +.-+.|..++.. +.++++++|.+
T Consensus 351 ~vL~-h~~v~~fvtH----gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~ 425 (480)
T 2vch_A 351 QVLA-HPSTGGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKG 425 (480)
T ss_dssp HHHH-STTEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHH
T ss_pred HHhC-CCCcCeEEec----ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHH
Confidence 4454 466 45553 123589999999999999743 3344454 566788887643 78899999988
Q ss_pred HH
Q 003987 728 FF 729 (781)
Q Consensus 728 ~l 729 (781)
++
T Consensus 426 vl 427 (480)
T 2vch_A 426 LM 427 (480)
T ss_dssp HH
T ss_pred Hh
Confidence 87
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=0.0021 Score=72.40 Aligned_cols=95 Identities=16% Similarity=0.120 Sum_probs=64.0
Q ss_pred CCcEEEeccccCcCChHHHHHHHHc-cCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccC-CeEEEE
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIAD-TKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEHG-ASGFHI 713 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~-aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~----gG~~EiI~dg-~~G~lv 713 (781)
.+++...+ +++.. .+++. ++|+||.=. =..++.||+++|+|+|+-.. ...+..+++. +.|..+
T Consensus 324 ~~~~~v~~----w~pq~---~vL~h~~~~~fvth~----G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l 392 (456)
T 2c1x_A 324 RGYGMVVP----WAPQA---EVLAHEAVGAFVTHC----GWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI 392 (456)
T ss_dssp TTTEEEES----CCCHH---HHHTSTTEEEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCceEEec----CCCHH---HHhcCCcCCEEEecC----CcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEe
Confidence 36788887 44443 34552 257777742 25699999999999999743 2345556666 788888
Q ss_pred CCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q 003987 714 DPY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 714 ~p~--d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~ 750 (781)
+.. +.++++++|.+++ .|++ .+++.+++++..
T Consensus 393 ~~~~~~~~~l~~~i~~ll----~~~~-~~~~r~~a~~l~ 426 (456)
T 2c1x_A 393 EGGVFTKSGLMSCFDQIL----SQEK-GKKLRENLRALR 426 (456)
T ss_dssp GGGSCCHHHHHHHHHHHH----HSHH-HHHHHHHHHHHH
T ss_pred cCCCcCHHHHHHHHHHHH----CCCc-HHHHHHHHHHHH
Confidence 632 6889999998877 6775 455666555543
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.012 Score=66.31 Aligned_cols=87 Identities=18% Similarity=0.171 Sum_probs=57.4
Q ss_pred CcEEEeccccCcCChHHHHHHHH-ccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc----cccccc-cccCCeEEEE-
Q 003987 641 GQFRWIAAQTNRARNGELYRYIA-DTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEI-IEHGASGFHI- 713 (781)
Q Consensus 641 ~~V~flG~~~~~v~~~el~~~la-~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~----gG~~Ei-I~dg~~G~lv- 713 (781)
+++...+ +++..+ +++ .++|+||.=. =..++.||+++|+|+|+-.. ...+.. ++.-+.|..+
T Consensus 332 ~~~~v~~----w~pq~~---vL~h~~~~~fvth~----G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~ 400 (463)
T 2acv_A 332 GKGMICG----WAPQVE---VLAHKAIGGFVSHC----GWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLR 400 (463)
T ss_dssp CSEEEES----SCCHHH---HHHSTTEEEEEECC----CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESC
T ss_pred CCEEEEc----cCCHHH---HhCCCccCeEEecC----CchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEe
Confidence 4677777 444433 454 1367787752 25799999999999999743 234445 4666789888
Q ss_pred C---C----CCHHHHHHHHHHHHHhccC-CHHHHHHH
Q 003987 714 D---P----YHPDQAAELMADFFGKCKE-NPSHWKKI 742 (781)
Q Consensus 714 ~---p----~d~~~lA~~I~~~l~~l~~-dp~~~~~~ 742 (781)
+ . -+.++++++|.+++ + +++.+++.
T Consensus 401 ~~~~~~~~~~~~~~l~~ai~~ll----~~~~~~r~~a 433 (463)
T 2acv_A 401 VDYRKGSDVVAAEEIEKGLKDLM----DKDSIVHKKV 433 (463)
T ss_dssp SSCCTTCCCCCHHHHHHHHHHHT----CTTCTHHHHH
T ss_pred cccCCCCccccHHHHHHHHHHHH----hccHHHHHHH
Confidence 2 2 37889999998776 4 44554443
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.0068 Score=68.30 Aligned_cols=93 Identities=14% Similarity=0.120 Sum_probs=61.8
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCc--EEEEcCCCCCCcHHHHHHHHcCCcEEEcCc----cccccccccC-CeEEE
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKG--AFVQPAFYEAFGLTVVEAMTCGLPTFATCH----GGPAEIIEHG-ASGFH 712 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aad--vfV~PS~~E~fGltvlEAMa~GlPVVaT~~----gG~~EiI~dg-~~G~l 712 (781)
.+++...+ +++..++. + .++ +||.=. =-.+++||+++|+|+|+-.. .-.+..+++. +.|..
T Consensus 326 ~~~~~vv~----w~Pq~~vL---~-h~~v~~fvtH~----G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~ 393 (454)
T 3hbf_A 326 KTKGKIVA----WAPQVEIL---K-HSSVGVFLTHS----GWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVG 393 (454)
T ss_dssp TTTEEEES----SCCHHHHH---H-STTEEEEEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEE
T ss_pred CCceEEEe----eCCHHHHH---h-hcCcCeEEecC----CcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEE
Confidence 46788888 55554444 4 477 566542 13689999999999999743 2344556664 78888
Q ss_pred ECC--CCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 003987 713 IDP--YHPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749 (781)
Q Consensus 713 v~p--~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~ 749 (781)
++. -+.++++++|.+++ .++ ..+++++++++.
T Consensus 394 l~~~~~~~~~l~~av~~ll----~~~-~~~~~r~~a~~l 427 (454)
T 3hbf_A 394 VDNGVLTKESIKKALELTM----SSE-KGGIMRQKIVKL 427 (454)
T ss_dssp CGGGSCCHHHHHHHHHHHH----SSH-HHHHHHHHHHHH
T ss_pred ecCCCCCHHHHHHHHHHHH----CCC-hHHHHHHHHHHH
Confidence 864 47889999998887 664 234455555443
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0053 Score=64.82 Aligned_cols=94 Identities=13% Similarity=0.154 Sum_probs=61.8
Q ss_pred CCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003987 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~ 651 (781)
+.+++++|..+...-...+++++.+. .. -.+|.|.+.. ..+++++.+++. +++++.++..
T Consensus 158 ~~ILv~~GG~d~~~l~~~vl~~L~~~----~~-i~vv~G~~~~-----------~~~~l~~~~~~~---~~v~v~~~~~- 217 (282)
T 3hbm_A 158 YDFFICMGGTDIKNLSLQIASELPKT----KI-ISIATSSSNP-----------NLKKLQKFAKLH---NNIRLFIDHE- 217 (282)
T ss_dssp EEEEEECCSCCTTCHHHHHHHHSCTT----SC-EEEEECTTCT-----------THHHHHHHHHTC---SSEEEEESCS-
T ss_pred CeEEEEECCCchhhHHHHHHHHhhcC----CC-EEEEECCCch-----------HHHHHHHHHhhC---CCEEEEeCHH-
Confidence 34677888776544333445554322 12 3455666643 145566655543 4799998644
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC
Q 003987 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC 696 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~ 696 (781)
++..+|+. +|+.|.++ |.|+.|++++|+|+|.-.
T Consensus 218 -----~m~~~m~~-aDlvI~~g-----G~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 218 -----NIAKLMNE-SNKLIISA-----SSLVNEALLLKANFKAIC 251 (282)
T ss_dssp -----CHHHHHHT-EEEEEEES-----SHHHHHHHHTTCCEEEEC
T ss_pred -----HHHHHHHH-CCEEEECC-----cHHHHHHHHcCCCEEEEe
Confidence 47788884 99999952 689999999999999864
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0074 Score=64.56 Aligned_cols=100 Identities=18% Similarity=0.063 Sum_probs=66.0
Q ss_pred CCEEEEEee-ccCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC--C-CCcEEE
Q 003987 572 KPIVFSMAR-LDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK--L-DGQFRW 645 (781)
Q Consensus 572 k~iIl~vGR-L~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elg--L-~~~V~f 645 (781)
+.+++..|. ..+.|.+. .+.+++..+.+. +++++++|+..+ .+...++.+..+ . ...+.+
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~g~~~e------------~~~~~~i~~~~~~~~~~~~~~l 246 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKD------------HEAGNEILAALNTEQQAWCRNL 246 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGG------------HHHHHHHHTTSCHHHHTTEEEC
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHC--CCeEEEEeChhh------------HHHHHHHHHhhhhccccceEec
Confidence 345566676 55667766 788888877654 689999886543 222333333221 0 122456
Q ss_pred eccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 646 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
.| ..+..++..+++. +|++|... .|..-+ |.|+|+|+|+-
T Consensus 247 ~g----~~sl~e~~ali~~-a~l~I~~D----sg~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 247 AG----ETQLDQAVILIAA-CKAIVTND----SGLMHV-AAALNRPLVAL 286 (348)
T ss_dssp TT----TSCHHHHHHHHHT-SSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred cC----cCCHHHHHHHHHh-CCEEEecC----CHHHHH-HHHcCCCEEEE
Confidence 66 5678899999995 99999985 244434 99999999985
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.15 Score=54.93 Aligned_cols=102 Identities=14% Similarity=0.158 Sum_probs=68.3
Q ss_pred CCCCCE-EEEEeeccCCCCh--HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEE
Q 003987 569 DRSKPI-VFSMARLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRW 645 (781)
Q Consensus 569 ~~~k~i-Il~vGRL~~~Kgl--~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~f 645 (781)
++++++ .+..|.=...|.+ +.+.+.+..+.+. +++++++|+..+ .+..+++++.++ ...+.+
T Consensus 182 ~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~--g~~vvl~g~~~e------------~~~~~~i~~~~~-~~~~~l 246 (349)
T 3tov_A 182 TDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL--GYKTVFFGGPMD------------LEMVQPVVEQME-TKPIVA 246 (349)
T ss_dssp CTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH--TCEEEECCCTTT------------HHHHHHHHHTCS-SCCEEC
T ss_pred CCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC--CCeEEEEeCcch------------HHHHHHHHHhcc-cccEEe
Confidence 334454 4556654456665 4677777777654 578888876543 334445555544 233566
Q ss_pred eccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 646 IAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 646 lG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
.| ..+-.|+..+++. +|++|..- .|..-+ |.++|+|+|+-
T Consensus 247 ~g----~~sl~e~~ali~~-a~~~i~~D----sG~~Hl-Aaa~g~P~v~l 286 (349)
T 3tov_A 247 TG----KFQLGPLAAAMNR-CNLLITND----SGPMHV-GISQGVPIVAL 286 (349)
T ss_dssp TT----CCCHHHHHHHHHT-CSEEEEES----SHHHHH-HHTTTCCEEEE
T ss_pred eC----CCCHHHHHHHHHh-CCEEEECC----CCHHHH-HHhcCCCEEEE
Confidence 66 6778899999995 99999983 255555 99999999996
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=87.55 E-value=1.6 Score=45.88 Aligned_cols=98 Identities=16% Similarity=0.134 Sum_probs=64.6
Q ss_pred CCEEEEEeeccCCCChH--HHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccc
Q 003987 572 KPIVFSMARLDHVKNMT--GLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQ 649 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~--~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~ 649 (781)
+.+++..|.=...|... .+.+.+..+.+. +++++++++++. +.+..+++.+.. +++.+.|
T Consensus 179 ~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~~g~~~-----------e~~~~~~i~~~~---~~~~l~g-- 240 (326)
T 2gt1_A 179 EYAVFLHATTRDDKHWPEEHWRELIGLLADS--GIRIKLPWGAPH-----------EEERAKRLAEGF---AYVEVLP-- 240 (326)
T ss_dssp SEEEEECCCSSGGGSCCHHHHHHHHHHTTTT--CCEEEECCSSHH-----------HHHHHHHHHTTC---TTEEECC--
T ss_pred CEEEEEeCCCCccccCCHHHHHHHHHHHHHC--CCcEEEecCCHH-----------HHHHHHHHHhhC---CcccccC--
Confidence 34455566545566665 777777777542 688888755432 122333343332 3466777
Q ss_pred cCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 650 TNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 650 ~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
..+-.|+..+++. +|++|..-. |..=+ |.|.|+|+|+-
T Consensus 241 --~~sl~el~ali~~-a~l~I~~DS----G~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 241 --KMSLEGVARVLAG-AKFVVSVDT----GLSHL-TAALDRPNITV 278 (326)
T ss_dssp --CCCHHHHHHHHHT-CSEEEEESS----HHHHH-HHHTTCCEEEE
T ss_pred --CCCHHHHHHHHHh-CCEEEecCC----cHHHH-HHHcCCCEEEE
Confidence 6778999999995 999999832 55555 77799999985
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=84.28 E-value=0.68 Score=46.92 Aligned_cols=64 Identities=8% Similarity=0.055 Sum_probs=41.7
Q ss_pred HHHHHHH-ccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc---c-----ccccccCCeEEEECCCCHHHHHHHHHH
Q 003987 657 ELYRYIA-DTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG---P-----AEIIEHGASGFHIDPYHPDQAAELMAD 727 (781)
Q Consensus 657 el~~~la-~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG---~-----~EiI~dg~~G~lv~p~d~~~lA~~I~~ 727 (781)
++..+|+ . +|++|.=+ =..|+.|++++|+|.|.-.... . ++.+.+...++.+ +++.++++|.+
T Consensus 124 ~m~~~l~~~-AdlvIsha----GagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~---~~~~L~~~i~~ 195 (224)
T 2jzc_A 124 KMQSIIRDY-SDLVISHA----GTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC---APTETGLIAGL 195 (224)
T ss_dssp SHHHHHHHH-CSCEEESS----CHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE---CSCTTTHHHHH
T ss_pred hHHHHHHhc-CCEEEECC----cHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc---CHHHHHHHHHH
Confidence 5777888 7 99998853 2569999999999999864432 1 3333333345555 34555666654
Q ss_pred H
Q 003987 728 F 728 (781)
Q Consensus 728 ~ 728 (781)
+
T Consensus 196 l 196 (224)
T 2jzc_A 196 R 196 (224)
T ss_dssp H
T ss_pred H
Confidence 4
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 781 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 3e-15 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 2e-12 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 2e-08 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 2e-04 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 76.6 bits (187), Expect = 3e-15
Identities = 56/382 (14%), Positives = 111/382 (29%), Gaps = 38/382 (9%)
Query: 382 RFDVWPYLETFTEDVGSEITAELQGF-PDFIIGNYSDGNLVASLL--AYKMGITQCTIAH 438
D W + L G+ PD + + + + A I H
Sbjct: 104 YPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIH 163
Query: 439 ALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYES 498
+ ++I+ K + F + D + A +TV +
Sbjct: 164 NIAFQGQFGANIFSKLALPAHAFGMEGI-----EYYNDVSFLKGGLQTATALSTVSPSYA 218
Query: 499 HTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPE 558
T + I + + G D D++ P ++ +++ + +
Sbjct: 219 EEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKK 278
Query: 559 QNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKS 618
EH + D P+ ++RL K + + E + + LVV+
Sbjct: 279 AVAEHF-RIDDDGSPLFCVISRLTWQKGIDLMAEAVDE--IVSLGGRLVVLGAGDV---- 331
Query: 619 KDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678
L+ +A N + + D A + P+ +E
Sbjct: 332 ---------ALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAG-CD---AIIIPSRFEPC 378
Query: 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHG---------ASGFHIDPYHPDQAAELMADFF 729
GLT + A+ G GG A+ + A+G P D + +
Sbjct: 379 GLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTV 438
Query: 730 GKCKENPSHWKKISDGGLKRIY 751
+ +P W ++ G+K
Sbjct: 439 -RYYHDPKLWTQMQKLGMKSDV 459
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 68.0 bits (165), Expect = 2e-12
Identities = 22/188 (11%), Positives = 50/188 (26%), Gaps = 13/188 (6%)
Query: 549 SIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGK----NSQLRELV 604
I + P ++ +FS+ RLD+ K + Y Q +
Sbjct: 231 EIAKQAAGPLPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKI 290
Query: 605 NLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIAD 664
+A + ++ ++E + + + L +
Sbjct: 291 RYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRY 350
Query: 665 TKGAFVQPAFYEAFGLTVVEAMTCGLPTF-----ATCHGGPAEIIEHGASGFHIDPYHPD 719
+ + + L E + P + G A + ++PY D
Sbjct: 351 S-DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELTS---ALIVNPYDRD 406
Query: 720 QAAELMAD 727
+ A +
Sbjct: 407 EVAAALDR 414
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 54.8 bits (130), Expect = 2e-08
Identities = 59/458 (12%), Positives = 117/458 (25%), Gaps = 71/458 (15%)
Query: 301 TGGQVVYILDQVRALENEMLLRIKRQGLDI--------SPKILIVTRLIPDAKGTTCNQR 352
GG + AL G ++ + + ++ +
Sbjct: 15 VGGLAEALTAISEAL--------ASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVS 66
Query: 353 LERVSGTEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFII 412
E I SE W + + +++ E + PD +
Sbjct: 67 YEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLRE-EPLPDVVH 125
Query: 413 GNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM 472
+ +L+ I H L K+K P + E + +
Sbjct: 126 FHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP-DIDPEHTGG 184
Query: 473 NNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDI 532
AD + T G +R G K V G D
Sbjct: 185 YIADIVTT---------------VSRGYLIDEWGFFRNFEG------KITYVFNGIDCSF 223
Query: 533 YFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVE 592
+ E+ + + R D + ++
Sbjct: 224 WNESYLTG--------------SRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLL 269
Query: 593 CYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNR 652
+ ++ + + + + EK + ++
Sbjct: 270 KAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEM------------- 316
Query: 653 ARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFH 712
+ E R + + + P+++E FGL +EAM G A+ GG +II + G
Sbjct: 317 -LSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNET-GIL 374
Query: 713 IDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRI 750
+ P + A + + + S K + KR
Sbjct: 375 VKAGDPGELANAILKAL---ELSRSDLSKFRENCKKRA 409
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 42.2 bits (97), Expect = 2e-04
Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
Query: 682 VVEAMTCGLPTFATCHGGPAEIIEHGASGFHI-DPYHPDQAAELMADFFGKCKENPSHWK 740
++EA+T GLP T G A I G I +P+ +Q E++
Sbjct: 286 LLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKAL----TQSPLRM 341
Query: 741 KISDGGLKRI 750
++
Sbjct: 342 AWAENARHYA 351
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 781 | |||
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.92 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.92 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.87 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.18 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.04 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.03 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.87 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.25 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 98.22 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 98.11 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 97.92 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 97.76 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.71 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.56 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.29 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 96.97 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 96.07 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 94.67 | |
| d1uana_ | 227 | Hypothetical protein TT1542 {Thermus thermophilus | 88.59 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=3.8e-41 Score=380.68 Aligned_cols=435 Identities=15% Similarity=0.143 Sum_probs=267.1
Q ss_pred eeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceee---
Q 003987 279 FNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLER--- 355 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~--- 355 (781)
|||++||.-.+|- -.+||+..++. .|+++|+++||+|+ |+|+.++.-... .....+.
T Consensus 1 M~i~~v~~e~~P~-------~~~GGl~~vv~--------~La~~L~~~Gh~V~----Vi~P~y~~~~~~-~~~~~~~~~~ 60 (477)
T d1rzua_ 1 MNVLSVSSEIYPL-------IKTGGLADVVG--------ALPIALEAHGVRTR----TLIPGYPAVKAA-VTDPVKCFEF 60 (477)
T ss_dssp CEEEEECSCBTTT-------BCSSHHHHHHH--------HHHHHHHTTTCEEE----EEEECCHHHHHH-CCSCEEEEEE
T ss_pred CEEEEEEEeeecc-------cccCcHHHHHH--------HHHHHHHHcCCeEE----EEecCCcchhhh-cccceEEEEE
Confidence 8999999776641 13699887777 67778899999999 998653210000 0000000
Q ss_pred --ecC---------CCCeEEEEecc----CCCcc-cccccc-cccCchhhHHHHHHHHHHHHHHHc-CCCceEEEEcCCC
Q 003987 356 --VSG---------TEHTHILRVPF----RSEKG-ILRQWI-SRFDVWPYLETFTEDVGSEITAEL-QGFPDFIIGNYSD 417 (781)
Q Consensus 356 --v~~---------~~~~~I~rvp~----~~~~~-~~~~~i-sr~~i~~yl~~f~~~~~~~i~~~~-~~kpDIIh~~~~~ 417 (781)
..+ .+++.++.+.. ....+ +...+. ...+.+.....+...+.+.+.... ..+|||||+|++.
T Consensus 61 ~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~ 140 (477)
T d1rzua_ 61 TDLLGEKADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQ 140 (477)
T ss_dssp SCSSSCCEEEEEEEETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHH
T ss_pred eccCCceEEEEEEEECCeeEEEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchh
Confidence 000 01233332211 01111 111110 011112222233333333333322 4589999999887
Q ss_pred chHHHHHHH--HHcCCcEEEEecCCcccCCCCChhhHhhhhcc-------ccchhhhhHHHHHHhhCCEEEecCHHHHhh
Q 003987 418 GNLVASLLA--YKMGITQCTIAHALEKTKYPDSDIYWKKFDEK-------YHFSCQFTADLIAMNNADFIITSTYQEIAG 488 (781)
Q Consensus 418 ~~lva~lla--r~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~-------y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~ 488 (781)
+.+.+..+. +..++|+|.|.|++............+..... ..+..........+..+|.++++|....+.
T Consensus 141 ~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~ 220 (477)
T d1rzua_ 141 AAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEE 220 (477)
T ss_dssp HTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhhcccccccccchhHHHHHHHHhhhhhhhccHHHHHH
Confidence 765555443 44579999999987544321111111111100 011111223456788999999999876542
Q ss_pred ccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCC
Q 003987 489 TKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLS 568 (781)
Q Consensus 489 ~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~ 568 (781)
.... + ..+....+. .. ...++.+|+||+|.+.|.|.....-...................+...++.
T Consensus 221 ~~~~---~---~~~~~~~~~----~~--~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~- 287 (477)
T d1rzua_ 221 ILTA---E---FGMGLEGVI----GS--RAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRID- 287 (477)
T ss_dssp TTSH---H---HHTTCHHHH----HT--TGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCC-
T ss_pred HHHH---h---cCcchhhhh----hh--ccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcccc-
Confidence 1111 0 000000000 01 135899999999999988753211000000000000000001112234442
Q ss_pred CCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEecc
Q 003987 569 DRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAA 648 (781)
Q Consensus 569 ~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~ 648 (781)
++++++|+++||+.+.||++.|++|+.++.+. +++|+++|.|+. ....++.++..+ +.++|.+.|
T Consensus 288 ~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~--~~~l~~~G~G~~----------~~~~~~~~~~~~--~~~~v~~~~- 352 (477)
T d1rzua_ 288 DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL--GGRLVVLGAGDV----------ALEGALLAAASR--HHGRVGVAI- 352 (477)
T ss_dssp CSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT--TCEEEEEECBCH----------HHHHHHHHHHHH--TTTTEEEEE-
T ss_pred cCCccEEEEEeeeeecCCcHHHHHHHHHHHhh--CCeEEEEecCCc----------hHHHHHHHHHhh--cCCeEEEEc-
Confidence 45678999999999999999999999998764 689999999865 233445555554 458899998
Q ss_pred ccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCC---------eEEEECCCCHH
Q 003987 649 QTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGA---------SGFHIDPYHPD 719 (781)
Q Consensus 649 ~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~---------~G~lv~p~d~~ 719 (781)
..+.++...+++ ++|+||+||.+|+||++++|||+||+|||+|+.||++|+|.|+. +|++++|+|++
T Consensus 353 ---~~~~~~~~~~~~-~aD~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~ 428 (477)
T d1rzua_ 353 ---GYNEPLSHLMQA-GCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLD 428 (477)
T ss_dssp ---SCCHHHHHHHHH-HCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHH
T ss_pred ---ccChhHHHHHHH-hCccccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHH
Confidence 455667777888 49999999999999999999999999999999999999998875 89999999999
Q ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHh
Q 003987 720 QAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINV 771 (781)
Q Consensus 720 ~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~ 771 (781)
+++++|.++++ ..+||+.|++|+++|. .++|||+++ ++.|+++++.
T Consensus 429 ~la~ai~~~l~-~~~~~~~~~~~~~~a~---~~~fsw~~~--a~~~~~lY~~ 474 (477)
T d1rzua_ 429 GLKQAIRRTVR-YYHDPKLWTQMQKLGM---KSDVSWEKS--AGLYAALYSQ 474 (477)
T ss_dssp HHHHHHHHHHH-HHTCHHHHHHHHHHHH---TCCCBHHHH--HHHHHHHHHH
T ss_pred HHHHHHHHHHh-hhCCHHHHHHHHHHHH---HhhCCHHHH--HHHHHHHHHH
Confidence 99999988773 3469999999998884 468999765 4556655543
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=8.5e-40 Score=360.70 Aligned_cols=411 Identities=15% Similarity=0.124 Sum_probs=276.3
Q ss_pred eeEEEEccCcCCcccccCCCCC-cccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccC------c
Q 003987 279 FNVVILSPHGYFGQANVLGLPD-TGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCN------Q 351 (781)
Q Consensus 279 mrI~ivS~h~~~~~~~vlg~p~-~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~------~ 351 (781)
|||+|+|..+. |. +||++.|+. .|+++|+++||+|+ |+|+.++........ .
T Consensus 1 MkIl~~~~~~p---------P~~~GG~~~~~~--------~La~~L~~~Gh~V~----Vvtp~~~~~~~~~~~~~~~~~~ 59 (437)
T d2bisa1 1 MKVLLLGFEFL---------PVKVGGLAEALT--------AISEALASLGHEVL----VFTPSHGRFQGEEIGKIRVFGE 59 (437)
T ss_dssp CEEEEECSCCT---------TCCSSSHHHHHH--------HHHHHHHHTTCEEE----EEEECTTSSCCEEEEEEECSSS
T ss_pred CEEEEECCccC---------CcccCCHHHHHH--------HHHHHHHHcCCEEE----EEecCCCccchhhccceeeccc
Confidence 89999997654 44 799999998 67788899999999 998665432211000 0
Q ss_pred ce---eeecCCCCeEEEEeccCCCc--c-cccccccccCchhhHHHHHHHHHHHHHHHc--CCCceEEEEcCCCchHHHH
Q 003987 352 RL---ERVSGTEHTHILRVPFRSEK--G-ILRQWISRFDVWPYLETFTEDVGSEITAEL--QGFPDFIIGNYSDGNLVAS 423 (781)
Q Consensus 352 ~~---e~v~~~~~~~I~rvp~~~~~--~-~~~~~isr~~i~~yl~~f~~~~~~~i~~~~--~~kpDIIh~~~~~~~lva~ 423 (781)
.. .......++++++++..-.. . +.+.| ...+.....|.......+.... ...|||||+|++..++++.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~~~~~ 136 (437)
T d2bisa1 60 EVQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGW---DGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGA 136 (437)
T ss_dssp EEEEEEEEEEETTEEEEEEESSGGGCSCTTCSHH---HHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGHHHHH
T ss_pred ccceeeeeeccCCeEEEecCccccccccccccch---hhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhhhhHhh
Confidence 00 00111124455554322110 0 01000 0111112223222222222222 4578999999999899999
Q ss_pred HHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccc
Q 003987 424 LLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFT 503 (781)
Q Consensus 424 llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~ 503 (781)
++++..++|+++++|+................ ....+......+......+|.+++.+........ ..+
T Consensus 137 ~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~---~~~------- 205 (437)
T d2bisa1 137 LIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGL-SELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEW---GFF------- 205 (437)
T ss_dssp HHHHHHCCCEEEEESSCCCCCEEHHHHHHTTC-GGGCCSSEECHHHHHHHHSSEEEESCHHHHHHTH---HHH-------
T ss_pred hhhccccCceeEEEeeccccccchhhhhhccc-hhhhhHHHHHHHHHHHHhhhhhcccchhhhhhhh---hhh-------
Confidence 99999999999999997664432111111111 1111122234566778889999999987654211 101
Q ss_pred cccceeeeccCCCCCCceEEecCCCcCCCCCCCcHH---HHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEee
Q 003987 504 LPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEK---QKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMAR 580 (781)
Q Consensus 504 l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~---~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGR 580 (781)
..+..|+.+|+||+|.+.|.+.... ..+.. .....+|. .++++|+++||
T Consensus 206 -----------~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~--------------~~~~~~~~---~~~~~i~~~G~ 257 (437)
T d2bisa1 206 -----------RNFEGKITYVFNGIDCSFWNESYLTGSRDERKK--------------SLLSKFGM---DEGVTFMFIGR 257 (437)
T ss_dssp -----------GGGTTTEEECCCCCCTTTSCGGGCCSCHHHHHH--------------HHHHHTTC---CSCEEEEEESC
T ss_pred -----------ccccCceEEEecccccccccccccchhhHHHHH--------------hhhhhhhc---cCCceEEEeec
Confidence 1226799999999999988764211 11100 01133454 46789999999
Q ss_pred ccC-CCChHHHHHHHHHhhcc--CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHH
Q 003987 581 LDH-VKNMTGLVECYGKNSQL--RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGE 657 (781)
Q Consensus 581 L~~-~Kgl~~LieA~~~l~~~--~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~e 657 (781)
+.. .||++.+++|+..+... .++++|+++|.|+. .....++.+.+. ....+.+.| ..+.++
T Consensus 258 ~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~----------~~~~~~~~~~~~--~~~~~~~~~----~~~~~~ 321 (437)
T d2bisa1 258 FDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP----------ELEGWARSLEEK--HGNVKVITE----MLSREF 321 (437)
T ss_dssp BCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCH----------HHHHHHHHHHHT--CTTEEEECS----CCCHHH
T ss_pred ccccchhHHHHHhhhcccccccccccceeeeeccccc----------ccccchhhhccc--cccceeccc----cCcHHH
Confidence 975 79999999999987543 47899999999865 222333333333 345566666 667888
Q ss_pred HHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHH
Q 003987 658 LYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPS 737 (781)
Q Consensus 658 l~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~ 737 (781)
+..+++ ++|++++||.+|+||++++|||+||+|||+|+.||..|+|.+ ++|++++++|++++|++|.++++ .|++
T Consensus 322 ~~~~~~-~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d~~~la~~i~~ll~---~~~~ 396 (437)
T d2bisa1 322 VRELYG-SVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALE---LSRS 396 (437)
T ss_dssp HHHHHT-TCSEEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTCHHHHHHHHHHHHT---TTTS
T ss_pred HHHHHh-hhccccccccccccchHHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEECCCCHHHHHHHHHHHHh---CCHH
Confidence 999998 599999999999999999999999999999999999999876 58999999999999999988873 5788
Q ss_pred HHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhcCCCC
Q 003987 738 HWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVISMPT 776 (781)
Q Consensus 738 ~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~~~~~ 776 (781)
.+++|++++++.+ ++|||+++ ++.|+++++.....+
T Consensus 397 ~~~~~~~~~~~~~-~~~s~~~~--a~~~~~iY~~~i~r~ 432 (437)
T d2bisa1 397 DLSKFRENCKKRA-MSFSWEKS--AERYVKAYTGSIDRA 432 (437)
T ss_dssp CTHHHHHHHHHHH-HHSCHHHH--HHHHHHHHHTCSCCB
T ss_pred HHHHHHHHHHHHH-HhCCHHHH--HHHHHHHHHHHHHhH
Confidence 9999999999988 57999764 577777776554443
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.5e-37 Score=330.19 Aligned_cols=364 Identities=15% Similarity=0.220 Sum_probs=250.4
Q ss_pred EEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEccCCCCCCCccCcceeeecCCC
Q 003987 281 VVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRLIPDAKGTTCNQRLERVSGTE 360 (781)
Q Consensus 281 I~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~~p~~~~~~~~~~~e~v~~~~ 360 (781)
|++++.+++| .||.++++. +|+++|+++||+|+ |+|+...... .+
T Consensus 2 i~f~~~~y~p----------~GG~e~~~~--------~la~~L~~~G~~V~----v~~~~~~~~~-------------~~ 46 (370)
T d2iw1a1 2 VAFCLYKYFP----------FGGLQRDFM--------RIASTVAARGHHVR----VYTQSWEGDC-------------PK 46 (370)
T ss_dssp EEEECSEECT----------TCHHHHHHH--------HHHHHHHHTTCCEE----EEESEECSCC-------------CT
T ss_pred EEEEecCCCC----------CCCHHHHHH--------HHHHHHHHCCCEEE----EEecCCCCCC-------------CC
Confidence 7888877663 499999999 78888899999999 9986632211 12
Q ss_pred CeEEEEeccCCCcccccccccccCchhhHHHHHHHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHHcCCcEEEEecCC
Q 003987 361 HTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHAL 440 (781)
Q Consensus 361 ~~~I~rvp~~~~~~~~~~~isr~~i~~yl~~f~~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~~gvp~v~t~H~l 440 (781)
+..++++|..... .......+...+...+.. .++|+||.+....++. . ...+..
T Consensus 47 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~---~~~d~v~~~~~~~~~~-----------~-~~~~~~ 100 (370)
T d2iw1a1 47 AFELIQVPVKSHT-----------NHGRNAEYYAWVQNHLKE---HPADRVVGFNKMPGLD-----------V-YFAADV 100 (370)
T ss_dssp TCEEEECCCCCSS-----------HHHHHHHHHHHHHHHHHH---SCCSEEEESSCCTTCS-----------E-EECCSC
T ss_pred ceEEEEcCccccc-----------cchhhHHHHHHHHHHHHh---cccceeeecccCchHH-----------H-HHHhhc
Confidence 4677777765421 111122344444444443 3899999877554211 1 111110
Q ss_pred cccCCC--CChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCC
Q 003987 441 EKTKYP--DSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFD 518 (781)
Q Consensus 441 ~~~k~~--~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~ 518 (781)
...... ...... .....++....+.........++.+++.+....+...+. .+.. .
T Consensus 101 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~--~ 158 (370)
T d2iw1a1 101 CYAEKVAQEKGFLY-RLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKH-------------------YQTE--P 158 (370)
T ss_dssp CHHHHHHHHCCHHH-HTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHH-------------------HCCC--G
T ss_pred ccceeeeeecCccc-cccchhchhHHHHHHHHhhccCceEEEecHHHHHHHHHh-------------------cCCC--c
Confidence 000000 000000 011111111111122233446788898888765522111 1222 6
Q ss_pred CceEEecCCCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhh
Q 003987 519 PKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNS 598 (781)
Q Consensus 519 ~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~ 598 (781)
.++.++|||+|.+.+.+......+. ..+..+|+ ++++++++++||+.+.||++.+++|++++.
T Consensus 159 ~~i~vi~~gv~~~~~~~~~~~~~~~---------------~~r~~~~~--~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~ 221 (370)
T d2iw1a1 159 ERFQILPPGIYPDRKYSEQIPNSRE---------------IYRQKNGI--KEQQNLLLQVGSDFGRKGVDRSIEALASLP 221 (370)
T ss_dssp GGEEECCCCCCGGGSGGGSCTTHHH---------------HHHHHTTC--CTTCEEEEEECSCTTTTTHHHHHHHHHTSC
T ss_pred ceEEEEEeecccccccccCchhhhh---------------hhhhccCC--CccceEEEEEeccccccchhhhcccccccc
Confidence 7899999999988765432111110 01234666 678899999999999999999999999998
Q ss_pred ccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCC
Q 003987 599 QLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAF 678 (781)
Q Consensus 599 ~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~f 678 (781)
+..++..++++|++.. .+.++++++++++.++++|+|.+. ++..+|+. +|++|+||..|+|
T Consensus 222 ~~~~~~~~~ii~g~~~------------~~~~~~~~~~~~~~~~v~~~g~~~------~~~~~~~~-adv~v~ps~~E~~ 282 (370)
T d2iw1a1 222 ESLRHNTLLFVVGQDK------------PRKFEALAEKLGVRSNVHFFSGRN------DVSELMAA-ADLLLHPAYQEAA 282 (370)
T ss_dssp HHHHHTEEEEEESSSC------------CHHHHHHHHHHTCGGGEEEESCCS------CHHHHHHH-CSEEEECCSCCSS
T ss_pred cccccceeeecccccc------------cccccccccccccccccccccccc------cccccccc-ccccccccccccc
Confidence 8777788888887765 346788899999999999999543 47788885 9999999999999
Q ss_pred cHHHHHHHHcCCcEEEcCccccccccccCCeEEEE-CCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcc
Q 003987 679 GLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHI-DPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVS 757 (781)
Q Consensus 679 GltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv-~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~ 757 (781)
|++++|||+||+|||+|+.||.+|++.++++|+++ +|+|+++++++|.+++ .|++.+++|+++|++++ ++|+|.
T Consensus 283 ~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll----~d~~~~~~~~~~ar~~~-~~~~~~ 357 (370)
T d2iw1a1 283 GIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKAL----TQSPLRMAWAENARHYA-DTQDLY 357 (370)
T ss_dssp CHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHH----HCHHHHHHHHHHHHHHH-HHSCCS
T ss_pred cceeeecccCCeeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHH----cCHHHHHHHHHHHHHHH-HHhChh
Confidence 99999999999999999999999999999999866 7899999999999887 89999999999999998 567774
Q ss_pred hhhhccchHHHHH
Q 003987 758 SDGIVDPSPFVIN 770 (781)
Q Consensus 758 ~~~il~~ye~ll~ 770 (781)
. +.+.++++++
T Consensus 358 ~--~~~~~~~ii~ 368 (370)
T d2iw1a1 358 S--LPEKAADIIT 368 (370)
T ss_dssp C--HHHHHHHHHH
T ss_pred H--HHHHHHHHHh
Confidence 3 3455666664
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=1.2e-23 Score=236.23 Aligned_cols=327 Identities=11% Similarity=0.033 Sum_probs=219.8
Q ss_pred HHHHHHHHHHcCCCceEEEEcCCCchHHHHHHHHH-cCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHH
Q 003987 394 EDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYK-MGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAM 472 (781)
Q Consensus 394 ~~~~~~i~~~~~~kpDIIh~~~~~~~lva~llar~-~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~ 472 (781)
...+..+.... ..-|+|+.|.+...+++..+.++ .+.+++++.|..++.. ... +.......-...+
T Consensus 110 ~~fA~~l~~~~-~~~d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~~----~~f--------r~lp~~~~il~~l 176 (456)
T d1uqta_ 110 ALLADKLLPLL-QDDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTP----EIF--------NALPTYDTLLEQL 176 (456)
T ss_dssp HHHHHHHGGGC-CTTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCH----HHH--------TTSTTHHHHHHHH
T ss_pred HHHHHHHHHhc-cCCCeEEEeccchhhhHHHHHHhCCCCcEEEEeCCCCCCh----HHh--------ccCcchHHHHHHh
Confidence 33444444432 34599999998886666655554 4688999999865421 111 1111112233467
Q ss_pred hhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecCCCcCCCCCCCcHHHHHHhhhhcchhh
Q 003987 473 NNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQ 552 (781)
Q Consensus 473 ~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpnGvD~~~f~p~~~~~~r~~~~~~~i~~ 552 (781)
-.+|.|...+...+....+.......... ..++ .....|- ..++.++|+|+|.+.|.+...... .+.+.+
T Consensus 177 l~~d~igf~~~~~~~~fl~~~~~ll~~~~-~~~~-~i~~~gr---~v~v~~~p~GID~~~~~~~~~~~~-----~~~~~~ 246 (456)
T d1uqta_ 177 CDYDLLGFQTENDRLAFLDCLSNLTRVTT-RSAK-SHTAWGK---AFRTEVYPIGIEPKEIAKQAAGPL-----PPKLAQ 246 (456)
T ss_dssp TTSSEEEESSHHHHHHHHHHHHHHSCEEE-ETTT-EEEETTE---EEEEEECCCCCCHHHHHHHHHSCC-----CHHHHH
T ss_pred hccccccccCHHHHHHHHHHHHHHhCccc-ccCC-eEEecCc---eeeeeeecCcccchhhhhhcccHH-----HHHHHH
Confidence 78999999987765543332221110000 0000 0111111 237888999999876643111000 000000
Q ss_pred hccCccccccccCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCC----CeEEEEEeCcCCCCCCcchHHHHHHH
Q 003987 553 LLFDPEQNDEHVGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRE----LVNLVVVAGYIDVNKSKDREEIAEIE 628 (781)
Q Consensus 553 ~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~----~v~LvIVG~g~~~~~~~d~ee~~~~~ 628 (781)
+ +.. ..++++|+++||+++.||+..+++|+.++.+.+| .+.|+++|.+.. +...++.+...
T Consensus 247 l-------~~~-----~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~---~~~~~~~~~~~ 311 (456)
T d1uqta_ 247 L-------KAE-----LKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSR---GDVQAYQDIRH 311 (456)
T ss_dssp H-------HHH-----TTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCS---TTSHHHHHHHH
T ss_pred H-------HHh-----cCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcc---cchHHHHHHHH
Confidence 0 001 2478899999999999999999999999876665 467888887754 33445555555
Q ss_pred HHHHHHHH-------cCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCc-----EEEcC
Q 003987 629 KMHELMKT-------YKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLP-----TFATC 696 (781)
Q Consensus 629 ~l~~li~e-------lgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlP-----VVaT~ 696 (781)
++.+++.+ .+..+.+.+.+ .++..++..+++. +|++++||..||||++++|||+||+| +|+|+
T Consensus 312 ev~~lv~~in~~~~~~~~~~~v~~~~----~~~~~~l~a~~~~-Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~ 386 (456)
T d1uqta_ 312 QLENEAGRINGKYGQLGWTPLYYLNQ----HFDRKLLMKIFRY-SDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQ 386 (456)
T ss_dssp HHHHHHHHHHHHHCBTTBCSEEEECS----CCCHHHHHHHHHH-CSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEET
T ss_pred HHHHHHHHHHhhhccCCCCceeeccC----CcCHHHHhHHHhh-hceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeC
Confidence 55555544 35567788887 7788999999995 99999999999999999999999999 89999
Q ss_pred ccccccccccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCcchhhhccchHHHHHhc
Q 003987 697 HGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLVVSSDGIVDPSPFVINVI 772 (781)
Q Consensus 697 ~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ysw~~~~il~~ye~ll~~~ 772 (781)
.+|+++.+.+ |++++|.|++++|++|.++++ .+++.++++.+++++++. +||+. .+.+.|..-++.+
T Consensus 387 ~~G~~~~l~~---g~lVnP~d~~~~A~ai~~aL~---~~~~er~~~~~~~~~~v~-~~~~~--~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 387 FAGAANELTS---ALIVNPYDRDEVAAALDRALT---MSLAERISRHAEMLDVIV-KNDIN--HWQECFISDLKQI 453 (456)
T ss_dssp TBGGGGTCTT---SEEECTTCHHHHHHHHHHHHT---CCHHHHHHHHHHHHHHHH-HTCHH--HHHHHHHHHHHHS
T ss_pred CCCCHHHhCC---eEEECcCCHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHH-HCCHH--HHHHHHHHHHHhh
Confidence 9999999853 899999999999999998873 578899999999999994 68874 4545555554443
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.92 E-value=2.3e-24 Score=214.17 Aligned_cols=169 Identities=17% Similarity=0.192 Sum_probs=140.7
Q ss_pred cccCCCCCCCCCEEEEEeecc-CCCChHHHHHHHHHhhc--cCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC
Q 003987 562 EHVGTLSDRSKPIVFSMARLD-HVKNMTGLVECYGKNSQ--LRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK 638 (781)
Q Consensus 562 ~~~g~l~~~~k~iIl~vGRL~-~~Kgl~~LieA~~~l~~--~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elg 638 (781)
+++|+ +++++|+|+||++ ++||++.+++|++.+.+ ..++++|+|+|.|.+ ......+.+.+.+
T Consensus 25 ~~~~l---~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~----------~~~~~~~~~~~~~- 90 (196)
T d2bfwa1 25 SKFGM---DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP----------ELEGWARSLEEKH- 90 (196)
T ss_dssp HHTTC---CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCH----------HHHHHHHHHHHHC-
T ss_pred HHhCC---CCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCCCeEEEEEeeccc----------chhhhhhhhhhcc-
Confidence 45776 5778899999997 58999999999999854 357899999998854 2223334444443
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCH
Q 003987 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHP 718 (781)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~ 718 (781)
...+.+.| .++.+++..+|+. +|++|+||..|+||++++|||+||+|||+|+.|+..|++.+ .+|++++|+|+
T Consensus 91 -~~~~~~~~----~~~~~~l~~~~~~-~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~~~~e~i~~-~~g~~~~~~~~ 163 (196)
T d2bfwa1 91 -GNVKVITE----MLSREFVRELYGS-VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDP 163 (196)
T ss_dssp -TTEEEECS----CCCHHHHHHHHTT-CSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHHHHHCCT-TTCEEECTTCH
T ss_pred -ceeEEeee----ccccccchhcccc-ccccccccccccccccchhhhhcCceeeecCCCccceeecC-CceeeECCCCH
Confidence 34556666 6778899999995 99999999999999999999999999999999999998865 58999999999
Q ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcC
Q 003987 719 DQAAELMADFFGKCKENPSHWKKISDGGLKRIYERLV 755 (781)
Q Consensus 719 ~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~~~~~ys 755 (781)
++++++|.+++. .+++.+++|+++|++++. +||
T Consensus 164 ~~l~~~i~~~l~---~~~~~~~~~~~~a~~~a~-~fs 196 (196)
T d2bfwa1 164 GELANAILKALE---LSRSDLSKFRENCKKRAM-SFS 196 (196)
T ss_dssp HHHHHHHHHHHH---CCHHHHHHHHHHHHHHHH-HTC
T ss_pred HHHHHHHHHHHh---CCHHHHHHHHHHHHHHHH-hCC
Confidence 999999998773 589999999999999984 575
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.87 E-value=4.3e-22 Score=192.64 Aligned_cols=152 Identities=20% Similarity=0.306 Sum_probs=124.7
Q ss_pred CCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcEEEeccccC
Q 003987 572 KPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQFRWIAAQTN 651 (781)
Q Consensus 572 k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V~flG~~~~ 651 (781)
...++|+||+.+.||++.+++|+++++ +.+|+|+|.+.... +.+.+.+.+.+.. .++|+|+|
T Consensus 12 ~~~~l~iGrl~~~K~~~~~i~a~~~l~----~~~l~ivg~~~~~~---------~~~~~~~~~~~~~-~~~v~~~g---- 73 (166)
T d2f9fa1 12 GDFWLSVNRIYPEKRIELQLEVFKKLQ----DEKLYIVGWFSKGD---------HAERYARKIMKIA-PDNVKFLG---- 73 (166)
T ss_dssp CSCEEEECCSSGGGTHHHHHHHHHHCT----TSCEEEEBCCCTTS---------THHHHHHHHHHHS-CTTEEEEE----
T ss_pred CCEEEEEecCccccCHHHHHHHHHHhc----CCeEEEEEeccccc---------chhhhhhhhcccc-cCcEEEee----
Confidence 355789999999999999999998874 57899999876511 1334444444443 46899999
Q ss_pred cCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccccccccccCCeEEEECCCCHHHHHHHHHHHHHh
Q 003987 652 RARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGASGFHIDPYHPDQAAELMADFFGK 731 (781)
Q Consensus 652 ~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~dg~~G~lv~p~d~~~lA~~I~~~l~~ 731 (781)
.++.+++..++.. +|++|+||..|+||++++|||+||+|||+|+.||..|+|.++.+|+++++ |+++++++|.+++
T Consensus 74 ~~~~~~~~~~~~~-ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i~~l~-- 149 (166)
T d2f9fa1 74 SVSEEELIDLYSR-CKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVS-- 149 (166)
T ss_dssp SCCHHHHHHHHHH-CSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHHHHHH--
T ss_pred ccccccccccccc-ccccccccccccccccccccccccccceeecCCcceeeecCCcccccCCC-CHHHHHHHHHHHH--
Confidence 6778899999995 99999999999999999999999999999999999999999999998875 8999999999888
Q ss_pred ccCCHHHHHHHHHHHHHHH
Q 003987 732 CKENPSHWKKISDGGLKRI 750 (781)
Q Consensus 732 l~~dp~~~~~~s~~a~~~~ 750 (781)
+|++ ++++++++++
T Consensus 150 --~~~~---~~~~~~~~~a 163 (166)
T d2f9fa1 150 --KNPD---KFKKDCFRRA 163 (166)
T ss_dssp --HCTT---TTHHHHHHHH
T ss_pred --hCHH---HHHHHHHHHH
Confidence 5654 2334444544
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.18 E-value=5.7e-10 Score=118.19 Aligned_cols=79 Identities=15% Similarity=0.104 Sum_probs=61.3
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc--------cccccccCCeE
Q 003987 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG--------PAEIIEHGASG 710 (781)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG--------~~EiI~dg~~G 710 (781)
..++|.+.| +++..++ +. .+|+||+.+- ..|+.|||++|+|+|+....+ .++.+++.+.|
T Consensus 268 ~~~~v~i~~----~~p~~~l---l~-~a~~~v~hgG----~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g 335 (391)
T d1pn3a_ 268 DGADCFVVG----EVNLQEL---FG-RVAAAIHHDS----AGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVG 335 (391)
T ss_dssp CCTTCCEES----SCCHHHH---HT-TSSCEEEESC----HHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSE
T ss_pred CCCCEEEec----ccCHHHH---Hh-hccEEEecCc----hHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCE
Confidence 467899998 5555555 45 5999998854 469999999999999975443 35667777789
Q ss_pred EEECCCC--HHHHHHHHHHHH
Q 003987 711 FHIDPYH--PDQAAELMADFF 729 (781)
Q Consensus 711 ~lv~p~d--~~~lA~~I~~~l 729 (781)
..++..+ +++++++|.+++
T Consensus 336 ~~l~~~~~~~~~l~~~i~~~l 356 (391)
T d1pn3a_ 336 VAVDGPVPTIDSLSAALDTAL 356 (391)
T ss_dssp EEECCSSCCHHHHHHHHHHHT
T ss_pred EEcCcCCCCHHHHHHHHHHHh
Confidence 9997765 889999998776
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.04 E-value=1.9e-09 Score=114.56 Aligned_cols=87 Identities=13% Similarity=0.071 Sum_probs=66.2
Q ss_pred CCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCccc----cccccccCCeEEEE
Q 003987 638 KLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHGG----PAEIIEHGASGFHI 713 (781)
Q Consensus 638 gL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~gG----~~EiI~dg~~G~lv 713 (781)
.+.++|++.+ .++..+++ . .+|+||+ .|-..++.|||++|+|+|+....+ .++.+++.+.|..+
T Consensus 283 ~~~~~v~~~~----~~p~~~ll---~-~~~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l 350 (401)
T d1rrva_ 283 DDRDDCFAID----EVNFQALF---R-RVAAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAH 350 (401)
T ss_dssp CCCTTEEEES----SCCHHHHG---G-GSSEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEEC
T ss_pred cCCCCEEEEe----ccCcHHHh---h-hccEEEe----cCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEc
Confidence 4578999998 55555554 4 5999996 456789999999999999976555 56677777789999
Q ss_pred CCCC--HHHHHHHHHHHHHhccCCHHHHHH
Q 003987 714 DPYH--PDQAAELMADFFGKCKENPSHWKK 741 (781)
Q Consensus 714 ~p~d--~~~lA~~I~~~l~~l~~dp~~~~~ 741 (781)
+..+ ++.++++|.+++ +|+.+++
T Consensus 351 ~~~~~~~~~L~~ai~~vl-----~~~~r~~ 375 (401)
T d1rrva_ 351 DGPTPTFESLSAALTTVL-----APETRAR 375 (401)
T ss_dssp SSSCCCHHHHHHHHHHHT-----SHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHh-----CHHHHHH
Confidence 8764 889999998775 4554443
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.03 E-value=1.8e-08 Score=105.20 Aligned_cols=94 Identities=16% Similarity=0.064 Sum_probs=64.0
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc---c----cccccccCCeEE
Q 003987 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG---G----PAEIIEHGASGF 711 (781)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g---G----~~EiI~dg~~G~ 711 (781)
...++...++.. ++..+++. +|++|.-+ =+.|+.||++||+|+|+.... + .++.+++.+.|+
T Consensus 229 ~~~~~~v~~f~~------~~~~lm~~-adl~It~~----G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~ 297 (351)
T d1f0ka_ 229 GQPQHKVTEFID------DMAAAYAW-ADVVVCRS----GALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAK 297 (351)
T ss_dssp TCTTSEEESCCS------CHHHHHHH-CSEEEECC----CHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEE
T ss_pred ccccceeeeehh------hHHHHHHh-Cchhhccc----cchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEE
Confidence 345677777543 35677885 99998853 248899999999999986322 2 245666677898
Q ss_pred EECCC--CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Q 003987 712 HIDPY--HPDQAAELMADFFGKCKENPSHWKKISDGGLKR 749 (781)
Q Consensus 712 lv~p~--d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~~ 749 (781)
.++.. +.+.+.++| .. -+++.+.+|++++++.
T Consensus 298 ~~~~~~~~~e~l~~~l----~~--l~~~~~~~~~~~~~~~ 331 (351)
T d1f0ka_ 298 IIEQPQLSVDAVANTL----AG--WSRETLLTMAERARAA 331 (351)
T ss_dssp ECCGGGCCHHHHHHHH----HT--CCHHHHHHHHHHHHHT
T ss_pred EechhhCCHHHHHHHH----Hh--hCHHHHHHHHHHHHcc
Confidence 88643 245555555 32 2677888898887753
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.87 E-value=6.3e-08 Score=101.90 Aligned_cols=79 Identities=15% Similarity=0.010 Sum_probs=61.1
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccccCCeEEEEC
Q 003987 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIEHGASGFHID 714 (781)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g----G~~EiI~dg~~G~lv~ 714 (781)
+.++|++.+ +++..++ +. .+|+||+ .|...++.|||++|+|+|+.... ..++.+++.+.|..++
T Consensus 283 ~~~nv~~~~----~~p~~~~---l~-~~~~~V~----hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~ 350 (401)
T d1iira_ 283 DGADCFAIG----EVNHQVL---FG-RVAAVIH----HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHD 350 (401)
T ss_dssp CGGGEEECS----SCCHHHH---GG-GSSEEEE----CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECS
T ss_pred CCCCEEEEe----ccCHHHH---Hh-hcCEEEe----cCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcC
Confidence 467899998 4555454 44 5899995 57788999999999999996433 3566677777899987
Q ss_pred CC--CHHHHHHHHHHHH
Q 003987 715 PY--HPDQAAELMADFF 729 (781)
Q Consensus 715 p~--d~~~lA~~I~~~l 729 (781)
.. ++++++++|.+++
T Consensus 351 ~~~~~~~~l~~ai~~~l 367 (401)
T d1iira_ 351 GPIPTFDSLSAALATAL 367 (401)
T ss_dssp SSSCCHHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHHh
Confidence 76 6899999998775
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.25 E-value=0.00012 Score=77.95 Aligned_cols=251 Identities=13% Similarity=0.096 Sum_probs=156.6
Q ss_pred CCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHHHhhCCEEEecCHH
Q 003987 406 GFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQ 484 (781)
Q Consensus 406 ~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a~~~AD~IIt~S~~ 484 (781)
.+||+|..+.-.. .+.++++|..+++|++. +|+-..+. ++.....+...| ..+-.-||.-+|+|..
T Consensus 87 ~kPD~vlv~GDr~e~la~a~aa~~~~ipi~H-iegG~rsg----~~~~~~~de~~R--------~~iskls~~hf~~t~~ 153 (373)
T d1v4va_ 87 MGADYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSG----NLKEPFPEEANR--------RLTDVLTDLDFAPTPL 153 (373)
T ss_dssp TTCSEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCS----CTTSSTTHHHHH--------HHHHHHCSEEEESSHH
T ss_pred cCcccccccccCccchhHHHHHHHhhhhhee-eccccccc----ccccCcchhhhh--------hhhccccceeeecchh
Confidence 3999999877544 67778889999999764 35432221 000011122221 1244568999999987
Q ss_pred HHhhccccccccccccccccccceeeeccCCCCCCceEEecC-CCcCCCCCCCcHHHHHHhhhhcchhhhccCccccccc
Q 003987 485 EIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEH 563 (781)
Q Consensus 485 ~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~~i~~~l~~~~~~~~~ 563 (781)
..+.+... |.+ ..++.++-+ ++|. -..... +. +..
T Consensus 154 ~~~~L~~~--------------------Ge~--~~~I~~vG~p~~D~---------i~~~~~-------~~------~~~ 189 (373)
T d1v4va_ 154 AKANLLKE--------------------GKR--EEGILVTGQTGVDA---------VLLAAK-------LG------RLP 189 (373)
T ss_dssp HHHHHHTT--------------------TCC--GGGEEECCCHHHHH---------HHHHHH-------HC------CCC
T ss_pred hhhhhhhh--------------------ccc--ccceeecccchhhH---------HHhhhh-------hc------ccc
Confidence 75532211 333 456666543 2221 110000 00 011
Q ss_pred cCCCCCCCCCEEEEEeeccCCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcCCCCcE
Q 003987 564 VGTLSDRSKPIVFSMARLDHVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYKLDGQF 643 (781)
Q Consensus 564 ~g~l~~~~k~iIl~vGRL~~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elgL~~~V 643 (781)
... ..++.+++++-|-...++...+.+++..+.+...++.+++...... .....+ .+......++
T Consensus 190 ~~~--~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~----------~~~~~~---~~~~~~~~n~ 254 (373)
T d1v4va_ 190 EGL--PEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP----------VVREAV---FPVLKGVRNF 254 (373)
T ss_dssp TTC--CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH----------HHHHHH---HHHHTTCTTE
T ss_pred ccc--ccccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeecccc----------cchhhh---hhhhcccccc
Confidence 111 3456677888887777888888888888877777777776544322 112222 2333445689
Q ss_pred EEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc-CccccccccccCCeEEEECCCCHHHHH
Q 003987 644 RWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT-CHGGPAEIIEHGASGFHIDPYHPDQAA 722 (781)
Q Consensus 644 ~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT-~~gG~~EiI~dg~~G~lv~p~d~~~lA 722 (781)
.++. .++..+...++.. +++++--| |-.+.||.++|+|||.- +.|.-.|-++.|.+ .++. .|.+++.
T Consensus 255 ~~~~----~l~~~~~l~ll~~-s~~vignS-----ssgi~Ea~~lg~P~Inir~~~eRqeg~~~g~n-vlv~-~d~~~I~ 322 (373)
T d1v4va_ 255 VLLD----PLEYGSMAALMRA-SLLLVTDS-----GGLQEEGAALGVPVVVLRNVTERPEGLKAGIL-KLAG-TDPEGVY 322 (373)
T ss_dssp EEEC----CCCHHHHHHHHHT-EEEEEESC-----HHHHHHHHHTTCCEEECSSSCSCHHHHHHTSE-EECC-SCHHHHH
T ss_pred eeec----cchHHHHHHHhhh-ceeEeccc-----chhhhcchhhcCcEEEeCCCccCHHHHhcCee-EEcC-CCHHHHH
Confidence 9987 7888899999985 76666544 77888999999999988 55777777666644 4444 5899999
Q ss_pred HHHHHHHHhccCCHHHHHHHHH
Q 003987 723 ELMADFFGKCKENPSHWKKISD 744 (781)
Q Consensus 723 ~~I~~~l~~l~~dp~~~~~~s~ 744 (781)
++|..++ .++..+.++..
T Consensus 323 ~~i~~~l----~~~~~~~~~~~ 340 (373)
T d1v4va_ 323 RVVKGLL----ENPEELSRMRK 340 (373)
T ss_dssp HHHHHHH----TCHHHHHHHHH
T ss_pred HHHHHHH----cCHHHHhhccc
Confidence 9997776 88888777643
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=98.22 E-value=1.1e-05 Score=93.21 Aligned_cols=143 Identities=14% Similarity=0.015 Sum_probs=106.3
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHHHH----HHHHHhhcc----CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTGLV----ECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~Li----eA~~~l~~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
+.|..-+++...++++-|+..+|....++ +.+..++.. ...+++++.|...+ .|..-++.++.+.+++
T Consensus 517 ~~g~~ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP----~d~~gK~iIk~I~~va 592 (796)
T d1l5wa_ 517 RTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAP----GYYLAKNIIFAINKVA 592 (796)
T ss_dssp HHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCT----TCHHHHHHHHHHHHHH
T ss_pred hcCcccChhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCC----chHHHHHHHHHHHHHH
Confidence 34555578899999999999999988743 333444332 12377877777654 4556666677777766
Q ss_pred HHcCC------CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 635 KTYKL------DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 635 ~elgL------~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
+..+- ..+|.|+. .. +-++.+.|-.++||-.+.+. .|+.|.+-+=||.-|.+.++|-.|...|+.++
T Consensus 593 ~~in~dp~~~~~~kVVFle----nY-dv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~ 667 (796)
T d1l5wa_ 593 DVINNDPLVGDKLKVVFLP----DY-CVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEK 667 (796)
T ss_dssp HHHHTCTTTGGGEEEEECS----SC-CHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHH
T ss_pred HHhcCChhhccceeEEEeC----CC-chHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHh
Confidence 64322 12688886 33 44666776668999999875 89999999999999999999999999998865
Q ss_pred --CCeEEEEC
Q 003987 707 --GASGFHID 714 (781)
Q Consensus 707 --g~~G~lv~ 714 (781)
++|||.|-
T Consensus 668 vg~eN~f~fG 677 (796)
T d1l5wa_ 668 VGEENIFIFG 677 (796)
T ss_dssp HCGGGSEECS
T ss_pred cCccceEEec
Confidence 88999994
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.11 E-value=3.4e-05 Score=89.06 Aligned_cols=143 Identities=13% Similarity=0.056 Sum_probs=106.4
Q ss_pred ccCCCCCCCCCEEEEEeeccCCCChHH----HHHHHHHhhcc----CCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHH
Q 003987 563 HVGTLSDRSKPIVFSMARLDHVKNMTG----LVECYGKNSQL----RELVNLVVVAGYIDVNKSKDREEIAEIEKMHELM 634 (781)
Q Consensus 563 ~~g~l~~~~k~iIl~vGRL~~~Kgl~~----LieA~~~l~~~----~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li 634 (781)
+.|+.-+++...++++-|+..+|.... ++..+.++++. ...+.+++.|...+ .|..-+..++.+.+++
T Consensus 541 ~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP----~d~~gK~iIk~I~~va 616 (824)
T d2gj4a1 541 EYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAP----GYHMAKMIIKLITAIG 616 (824)
T ss_dssp HHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCT----TCHHHHHHHHHHHHHH
T ss_pred HhCCCCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEEEeCCCCC----ccHHHHHHHHHHHHHH
Confidence 345555888999999999999999988 33444555432 12467777776654 3556666677777776
Q ss_pred HHcCCC------CcEEEeccccCcCChHHHHHHHHccCcEEEEcCC--CCCCcHHHHHHHHcCCcEEEcCcccccccccc
Q 003987 635 KTYKLD------GQFRWIAAQTNRARNGELYRYIADTKGAFVQPAF--YEAFGLTVVEAMTCGLPTFATCHGGPAEIIEH 706 (781)
Q Consensus 635 ~elgL~------~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~--~E~fGltvlEAMa~GlPVVaT~~gG~~EiI~d 706 (781)
+..+.+ .+|.|+. ... -.+.+.|-.++|+-.+.|. .|+.|..=+=||.-|.+.++|-.|...|+.++
T Consensus 617 ~~in~dp~~~~~lkVvFle----nY~-v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~ 691 (824)
T d2gj4a1 617 DVVNHDPVVGDRLRVIFLE----NYR-VSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEE 691 (824)
T ss_dssp HHHTTCTTTGGGEEEEEET----TCC-HHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHH
T ss_pred HHHhcChhhccceeEEEcC----CCc-hHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHh
Confidence 644432 2688886 333 4566666668999999885 89999999999999999999999999998875
Q ss_pred --CCeEEEEC
Q 003987 707 --GASGFHID 714 (781)
Q Consensus 707 --g~~G~lv~ 714 (781)
++|||.|-
T Consensus 692 vg~~N~~~fG 701 (824)
T d2gj4a1 692 AGEENFFIFG 701 (824)
T ss_dssp HCGGGSEECS
T ss_pred cCcccEEEeC
Confidence 78999984
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=97.92 E-value=0.00046 Score=73.06 Aligned_cols=89 Identities=17% Similarity=0.144 Sum_probs=58.0
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Cccccccc-cccCCeEEEEC
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEI-IEHGASGFHID 714 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~Ei-I~dg~~G~lv~ 714 (781)
.+++.+.. ..+..++. ... .+++||.= |-..++.||+.+|+|+|+. |....+.- ++..+.|+.++
T Consensus 329 ~~n~~v~~----~~pq~~~l-~~p-~~~~fItH----GG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~ 398 (461)
T d2acva1 329 EGKGMICG----WAPQVEVL-AHK-AIGGFVSH----CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLR 398 (461)
T ss_dssp HCSEEEES----SCCHHHHH-HST-TEEEEEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESC
T ss_pred CCCeEEEe----cCCHHHHH-hcc-cCCEEEec----CCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEee
Confidence 35666665 33333333 223 47888875 3356999999999999996 44445554 45567899886
Q ss_pred CC--------CHHHHHHHHHHHHHhccCCHHHHHH
Q 003987 715 PY--------HPDQAAELMADFFGKCKENPSHWKK 741 (781)
Q Consensus 715 p~--------d~~~lA~~I~~~l~~l~~dp~~~~~ 741 (781)
.. +.++++++|.++++ +|+.++++
T Consensus 399 ~~~~~~~~~~t~~~l~~a~~~vl~---~d~~~r~~ 430 (461)
T d2acva1 399 VDYRKGSDVVAAEEIEKGLKDLMD---KDSIVHKK 430 (461)
T ss_dssp SSCCTTCCCCCHHHHHHHHHHHTC---TTCTHHHH
T ss_pred ccccccCCccCHHHHHHHHHHHhh---CCHHHHHH
Confidence 43 67899999988772 24545544
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=97.76 E-value=0.0037 Score=66.04 Aligned_cols=263 Identities=14% Similarity=0.106 Sum_probs=141.7
Q ss_pred HHHHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHH
Q 003987 391 TFTEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADL 469 (781)
Q Consensus 391 ~f~~~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~ 469 (781)
.....+.+.+.+. +||+|..+.-.. .+.++++|..+++|++ .+|+-+.+.. ..+...+...| .
T Consensus 75 ~~i~~~~~~~~~~---kpD~v~v~GDr~e~la~a~aa~~~~Ipi~-HiegG~~s~~----~~~~~~de~~R--------~ 138 (377)
T d1o6ca_ 75 NALVRLDELFKDI---KPDIVLVHGDTTTTFAGSLAAFYHQIAVG-HVEAGLRTGN----KYSPFPEELNR--------Q 138 (377)
T ss_dssp HHHHHHHHHHHHH---CCSEEEEETTCHHHHHHHHHHHHTTCEEE-EESCCCCCSC----TTTTTTHHHHH--------H
T ss_pred HHHHhhhhhhhhc---ccceeEeeecccccchhhhhhhhccceEE-EEeccccccc----ccccCchhhhc--------c
Confidence 3333444455554 999999886554 6788999999999975 4455433321 11112233322 1
Q ss_pred HHHhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecC-CCcCCCCCCCcHHHHHHhhhhc
Q 003987 470 IAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMDIYFPYSEKQKRLTALHG 548 (781)
Q Consensus 470 ~a~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpn-GvD~~~f~p~~~~~~r~~~~~~ 548 (781)
..-.-||..+++|....+.+.+ -|.+ ..++.++-+ ++|. -... ..
T Consensus 139 ~iskls~~hf~~t~~~~~~L~~--------------------~G~~--~~~I~~vG~~~~D~---------i~~~---~~ 184 (377)
T d1o6ca_ 139 MTGAIADLHFAPTGQAKDNLLK--------------------ENKK--ADSIFVTGNTAIDA---------LNTT---VR 184 (377)
T ss_dssp HHHHHCSEEEESSHHHHHHHHH--------------------TTCC--GGGEEECCCHHHHH---------HHHH---CC
T ss_pred ccccceeEEeecchhhhhhhhh--------------------hccc--cceEeeccchhHHH---------HHHH---HH
Confidence 2345699999999877553221 1333 556766654 2231 0000 00
Q ss_pred chhhhccCccccccccCCCCCCCCCEEEEEeeccCC-CChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHH
Q 003987 549 SIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLDHV-KNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEI 627 (781)
Q Consensus 549 ~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~~~-Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~ 627 (781)
.......+... ..++.++++.-|.... +.....+..+..+....++..+++......
T Consensus 185 --------~~~~~~~~~~~-~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------------- 242 (377)
T d1o6ca_ 185 --------DGYSHPVLDQV-GEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNP------------- 242 (377)
T ss_dssp --------SSCCCSTTTTT-TTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC----C-------------
T ss_pred --------HHHhhhhhhhc-cCCceEEEEeccccccccchHHHHHHHHhhccccccccccccccccc-------------
Confidence 00001112221 2344556666665543 333444455544444445566554443322
Q ss_pred HHHHHH-HHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc-cccccccc
Q 003987 628 EKMHEL-MKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEIIE 705 (781)
Q Consensus 628 ~~l~~l-i~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~-gG~~EiI~ 705 (781)
..... .+.+...++|.++. .++..+...++.. |++++-=| |-.+.||-..|+|+|.-.. +.-.+-++
T Consensus 243 -~~~~~~~~~~~~~~ni~~~~----~l~~~~fl~llk~-s~~vIgnS-----ss~i~Ea~~lg~P~Inir~~tERqe~~~ 311 (377)
T d1o6ca_ 243 -VVREAAHKHFGDSDRVHLIE----PLEVIDFHNFAAK-SHFILTDS-----GGVQEEAPSLGKPVLVLRDTTERPEGVE 311 (377)
T ss_dssp -HHHHHHHHC--CCSSEEECC----CCCHHHHHHHHHH-CSEEEEC-------CHHHHGGGGTCCEEEECSCCC---CTT
T ss_pred -ccchhhhhccccccceEecc----ccchHHHHHHHhh-hheeeccc-----chhHHhhhhhhceEEEeCCCCcCcchhh
Confidence 12222 23344567899997 7888999999996 88777443 5568899999999998743 44556665
Q ss_pred cCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHHH
Q 003987 706 HGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKKI 742 (781)
Q Consensus 706 dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~~ 742 (781)
.|. -.++++ |.+++.+++..++ .++..++.+
T Consensus 312 ~g~-nilv~~-~~~~I~~~i~~~l----~~~~~~~~~ 342 (377)
T d1o6ca_ 312 AGT-LKLAGT-DEENIYQLAKQLL----TDPDEYKKM 342 (377)
T ss_dssp TTS-SEEECS-CHHHHHHHHHHHH----HCHHHHHHH
T ss_pred cCe-eEECCC-CHHHHHHHHHHHH----hChHHHhhh
Confidence 554 456765 8888888887766 677766654
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.71 E-value=0.0013 Score=69.52 Aligned_cols=86 Identities=15% Similarity=0.088 Sum_probs=59.6
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCcc----ccccccc-cCCeEEEEC
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCHG----GPAEIIE-HGASGFHID 714 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~g----G~~EiI~-dg~~G~lv~ 714 (781)
..++.... .++..++.. .. .+++||.= |=..++.||+.+|+|+|+.-.. ..+.-|+ ..+.|..++
T Consensus 318 ~~nv~~~~----~~pq~~lL~-hp-~~~~fItH----GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~ 387 (450)
T d2c1xa1 318 RGYGMVVP----WAPQAEVLA-HE-AVGAFVTH----CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE 387 (450)
T ss_dssp TTTEEEES----CCCHHHHHT-ST-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG
T ss_pred cccccccc----cCChHhhhc-cC-ceeEEEcc----CCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEec
Confidence 46788877 455544442 12 36777775 3356999999999999998433 3444454 457899887
Q ss_pred CC--CHHHHHHHHHHHHHhccCCHHHH
Q 003987 715 PY--HPDQAAELMADFFGKCKENPSHW 739 (781)
Q Consensus 715 p~--d~~~lA~~I~~~l~~l~~dp~~~ 739 (781)
.. +.+++.++|.+++ +|+.++
T Consensus 388 ~~~~t~~~l~~ai~~vL----~d~~y~ 410 (450)
T d2c1xa1 388 GGVFTKSGLMSCFDQIL----SQEKGK 410 (450)
T ss_dssp GGSCCHHHHHHHHHHHH----HSHHHH
T ss_pred CCCcCHHHHHHHHHHHh----cCcHHH
Confidence 55 6799999998888 787653
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.56 E-value=0.0024 Score=67.42 Aligned_cols=94 Identities=14% Similarity=0.209 Sum_probs=64.1
Q ss_pred CCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc----Ccccccccc-ccCCeEEEEC
Q 003987 640 DGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT----CHGGPAEII-EHGASGFHID 714 (781)
Q Consensus 640 ~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT----~~gG~~EiI-~dg~~G~lv~ 714 (781)
.+||.... +++..++.. .. .+++||+= |=..++.||+.+|+|+|+. |....+.-| +..+.|..++
T Consensus 345 ~~Nv~~~~----~~Pq~~lL~-hp-~~~~fItH----GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~ 414 (473)
T d2pq6a1 345 ADRGLIAS----WCPQDKVLN-HP-SIGGFLTH----CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID 414 (473)
T ss_dssp TTTEEEES----CCCHHHHHT-ST-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC
T ss_pred cCceEEee----eCCHHHHhc-CC-cCcEEEec----CCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeC
Confidence 47888887 555555541 02 36778875 3356999999999999998 344455545 4447899987
Q ss_pred CC-CHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Q 003987 715 PY-HPDQAAELMADFFGKCKENPSHWKKISDGGLK 748 (781)
Q Consensus 715 p~-d~~~lA~~I~~~l~~l~~dp~~~~~~s~~a~~ 748 (781)
.. +.++++++|.+++ .|+.. +++.++|.+
T Consensus 415 ~~~t~~~l~~ai~~vl----~d~~~-~~~r~~a~~ 444 (473)
T d2pq6a1 415 TNVKREELAKLINEVI----AGDKG-KKMKQKAME 444 (473)
T ss_dssp SSCCHHHHHHHHHHHH----TSHHH-HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHH----cCChH-HHHHHHHHH
Confidence 54 7899999998888 78763 234444444
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.29 E-value=0.01 Score=62.52 Aligned_cols=265 Identities=12% Similarity=0.094 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHcCCCceEEEEcCCCc-hHHHHHHHHHcCCcEEEEecCCcccCCCCChhhHhhhhccccchhhhhHHHHH
Q 003987 393 TEDVGSEITAELQGFPDFIIGNYSDG-NLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIA 471 (781)
Q Consensus 393 ~~~~~~~i~~~~~~kpDIIh~~~~~~-~lva~llar~~gvp~v~t~H~l~~~k~~~s~~~~k~~~~~y~f~~~~~~e~~a 471 (781)
...+...+.+. +||+|..+.-.. .+.++++|..+++|++. +|+-+.+. +..+...+..+| ...
T Consensus 75 i~~~~~~~~~~---kPD~v~v~GDr~e~la~a~aa~~~~ipi~H-iegG~~s~----~~~~~~pde~~R--------~~i 138 (376)
T d1f6da_ 75 LEGLKPILAEF---KPDVVLVHGDTTTTLATSLAAFYQRIPVGH-VEAGLRTG----DLYSPWPEEANR--------TLT 138 (376)
T ss_dssp HHHHHHHHHHH---CCSEEEEETTCHHHHHHHHHHHTTTCCEEE-ESCCCCCS----CTTSSTTHHHHH--------HHH
T ss_pred HHhhHHHHHhc---cCcceeeeccccchhhHHHHHHhhCceEEE-Eecccccc----cccccCchhhhh--------hhh
Confidence 33344444444 899999886443 78888889999999754 56543322 111112233222 123
Q ss_pred HhhCCEEEecCHHHHhhccccccccccccccccccceeeeccCCCCCCceEEecC-CCcCC-----CCCCCcHHHHHHhh
Q 003987 472 MNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSP-GADMD-----IYFPYSEKQKRLTA 545 (781)
Q Consensus 472 ~~~AD~IIt~S~~~~~~~k~~v~qyes~~~f~l~~ly~v~~gi~~f~~k~~VIpn-GvD~~-----~f~p~~~~~~r~~~ 545 (781)
-.-||.-+|+++...+.+.+. |.+ +.++.++-+ ++|.- ..........
T Consensus 139 skls~~hf~~~~~~~~~L~~~--------------------G~~--~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~---- 192 (376)
T d1f6da_ 139 GHLAMYHFSPTETSRQNLLRE--------------------NVA--DSRIFITGNTVIDALLWVRDQVMSSDKLRS---- 192 (376)
T ss_dssp HHTCSEEEESSHHHHHHHHHT--------------------TCC--GGGEEECCCHHHHHHHHHHHHTTTCHHHHH----
T ss_pred ccceeEEEeccHHHHhHHHhc--------------------CCC--ccccceecCchHHHHHHHHhhhhccchhhh----
Confidence 456899999998775532211 443 556777643 33320 0000000000
Q ss_pred hhcchhhhccCccccccccCCCCCCCCCEEEEEeecc-CCCChHHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHH
Q 003987 546 LHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFSMARLD-HVKNMTGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEI 624 (781)
Q Consensus 546 ~~~~i~~~l~~~~~~~~~~g~l~~~~k~iIl~vGRL~-~~Kgl~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~ 624 (781)
+.+ ..++......+.++++.=|.. ..+++..++.++..+.+...++.+++-.....
T Consensus 193 ------~~~-------~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~---------- 249 (376)
T d1f6da_ 193 ------ELA-------ANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNP---------- 249 (376)
T ss_dssp ------HHH-------TTCTTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCH----------
T ss_pred ------hhh-------ccccccCCCCceEEEecccchhhhhhHHHHHHHHhhhhhhcceeEEecccccch----------
Confidence 000 011111122334455544433 24556677777777766666677665543221
Q ss_pred HHHHHHHHHHHHcCCCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcCc-cccccc
Q 003987 625 AEIEKMHELMKTYKLDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATCH-GGPAEI 703 (781)
Q Consensus 625 ~~~~~l~~li~elgL~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~~-gG~~Ei 703 (781)
...... .+.+....++.++. .+...+...++.. |++++-=| |-.+.||-..|+|||.-.. ..-.+-
T Consensus 250 ~~~~~~---~~~~~~~~ni~~~~----~l~~~~fl~ll~~-a~~vignS-----ssgi~Ea~~lg~P~Inir~~ter~~~ 316 (376)
T d1f6da_ 250 NVREPV---NRILGHVKNVILID----PQEYLPFVWLMNH-AWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEA 316 (376)
T ss_dssp HHHHHH---HHHHTTCTTEEEEC----CCCHHHHHHHHHH-CSEEEESS-----SGGGGTGGGGTCCEEECSSCCSCHHH
T ss_pred hhhhhH---hhhhcccccceeec----cccHHHHHHHHhh-ceEEEecC-----cchHhhHHHhCCCEEEcCCCccCccc
Confidence 111112 22234457899987 6778889999985 77777554 5677899999999997532 234455
Q ss_pred cccCCeEEEECCCCHHHHHHHHHHHHHhccCCHHHHHH
Q 003987 704 IEHGASGFHIDPYHPDQAAELMADFFGKCKENPSHWKK 741 (781)
Q Consensus 704 I~dg~~G~lv~p~d~~~lA~~I~~~l~~l~~dp~~~~~ 741 (781)
+..+ +-.++++ |.+++.+++.+++ .++..+..
T Consensus 317 ~~~g-~~i~v~~-~~~~I~~ai~~~l----~~~~~~~~ 348 (376)
T d1f6da_ 317 VTAG-TVRLVGT-DKQRIVEEVTRLL----KDENEYQA 348 (376)
T ss_dssp HHHT-SEEECCS-SHHHHHHHHHHHH----HCHHHHHH
T ss_pred eecC-eeEECCC-CHHHHHHHHHHHH----hChHhhhh
Confidence 5444 4566654 8999999997776 56654433
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.97 E-value=0.021 Score=59.77 Aligned_cols=85 Identities=14% Similarity=0.157 Sum_probs=58.1
Q ss_pred CCCcEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEcC----cccccccc-ccCCeEEEE
Q 003987 639 LDGQFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATC----HGGPAEII-EHGASGFHI 713 (781)
Q Consensus 639 L~~~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT~----~gG~~EiI-~dg~~G~lv 713 (781)
..++|.+.+ +++..++... . .+++||.= |=..++.||+.+|+|+|+.- ....+..+ +.-+.|..+
T Consensus 332 ~~~nv~~~~----w~Pq~~lL~h-p-~~~~fVtH----GG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l 401 (471)
T d2vcha1 332 KKRGFVIPF----WAPQAQVLAH-P-STGGFLTH----CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRP 401 (471)
T ss_dssp TTTEEEEES----CCCHHHHHHS-T-TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECC
T ss_pred cCCCeeecc----cCCHHHHhcC-c-cCCEEEec----CCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEE
Confidence 357899988 5666665531 1 36777764 33469999999999999973 33344444 434678776
Q ss_pred CCC-----CHHHHHHHHHHHHHhccCCHH
Q 003987 714 DPY-----HPDQAAELMADFFGKCKENPS 737 (781)
Q Consensus 714 ~p~-----d~~~lA~~I~~~l~~l~~dp~ 737 (781)
... +.++++++|.+++ +|++
T Consensus 402 ~~~~~~~~t~~~l~~ai~~vl----~~~~ 426 (471)
T d2vcha1 402 RAGDDGLVRREEVARVVKGLM----EGEE 426 (471)
T ss_dssp CCCTTSCCCHHHHHHHHHHHH----TSTH
T ss_pred ecCCCCcCCHHHHHHHHHHHh----CCcH
Confidence 543 6789999998887 6754
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=94.67 E-value=0.25 Score=49.65 Aligned_cols=103 Identities=15% Similarity=0.066 Sum_probs=63.9
Q ss_pred CCCCCEE-EEEe-eccCCCCh--HHHHHHHHHhhccCCCeEEEEEeCcCCCCCCcchHHHHHHHHHHHHHHHcC---CCC
Q 003987 569 DRSKPIV-FSMA-RLDHVKNM--TGLVECYGKNSQLRELVNLVVVAGYIDVNKSKDREEIAEIEKMHELMKTYK---LDG 641 (781)
Q Consensus 569 ~~~k~iI-l~vG-RL~~~Kgl--~~LieA~~~l~~~~~~v~LvIVG~g~~~~~~~d~ee~~~~~~l~~li~elg---L~~ 641 (781)
..+++.| +..| +-.+.|.+ +..++...++.+. +.+++++|+..+ .+....+.+... ...
T Consensus 177 ~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~--~~~ivl~g~~~e------------~~~~~~~~~~~~~~~~~~ 242 (348)
T d1pswa_ 177 SSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKD------------HEAGNEILAALNTEQQAW 242 (348)
T ss_dssp CSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGG------------HHHHHHHHTTSCHHHHTT
T ss_pred ccCCCeEEeccccchhhccccchHHHhhhHHHHhhc--CCccccccccch------------HHHHHHHHHhhhcccccc
Confidence 3445554 4443 33444653 3466666666553 567888887644 222222222221 122
Q ss_pred cEEEeccccCcCChHHHHHHHHccCcEEEEcCCCCCCcHHHHHHHHcCCcEEEc
Q 003987 642 QFRWIAAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFAT 695 (781)
Q Consensus 642 ~V~flG~~~~~v~~~el~~~la~aadvfV~PS~~E~fGltvlEAMa~GlPVVaT 695 (781)
-+.+.| ..+-.|+..++.. +|++|.+. +-.+--|.++|+|+|+=
T Consensus 243 ~~~l~g----~~sl~el~~li~~-a~l~I~~D-----tg~~HlAaa~g~p~i~l 286 (348)
T d1pswa_ 243 CRNLAG----ETQLDQAVILIAA-CKAIVTND-----SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp EEECTT----TSCHHHHHHHHHT-SSEEEEES-----SHHHHHHHHTTCCEEEE
T ss_pred cccccC----CccHHHHHHHHhc-ceeEeecC-----ccHHHHHHHcCCCEEEE
Confidence 244555 6678899999996 99999985 35678899999999995
|
| >d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: LmbE-like superfamily: LmbE-like family: LmbE-like domain: Hypothetical protein TT1542 species: Thermus thermophilus [TaxId: 274]
Probab=88.59 E-value=0.24 Score=47.68 Aligned_cols=40 Identities=38% Similarity=0.640 Sum_probs=25.2
Q ss_pred ceeEEEEccCcCCcccccCCCCCcccceeehHHHHHHHHHHHHHHHHHCCCceeecceEEEcc
Q 003987 278 VFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKRQGLDISPKILIVTRL 340 (781)
Q Consensus 278 ~mrI~ivS~h~~~~~~~vlg~p~~GG~~vyvld~araL~~eLa~~L~~~GheV~~~v~VvT~~ 340 (781)
||||++|++|-- ..++| .||. ...++++|++|. |+++|.+
T Consensus 1 m~~VLvi~aHPD---De~lg---~GGt---------------iak~~~~G~~V~--vv~~T~G 40 (227)
T d1uana_ 1 MLDLLVVAPHPD---DGELG---CGGT---------------LARAKAEGLSTG--ILDLTRG 40 (227)
T ss_dssp CEEEEEEESSTT---HHHHH---HHHH---------------HHHHHHTTCCEE--EEEEECC
T ss_pred CceEEEEEeCCC---hHHHH---HHHH---------------HHHHHHcCCeEE--EEEEeCC
Confidence 589999999942 22233 4552 234688999998 4445443
|