Citrus Sinensis ID: 003999
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 780 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LRA7 | 867 | Probable alpha,alpha-treh | yes | no | 0.966 | 0.869 | 0.803 | 0.0 | |
| O80738 | 861 | Probable alpha,alpha-treh | no | no | 0.966 | 0.875 | 0.786 | 0.0 | |
| Q0WUI9 | 856 | Probable alpha,alpha-treh | no | no | 0.960 | 0.875 | 0.789 | 0.0 | |
| O23617 | 862 | Alpha,alpha-trehalose-pho | no | no | 0.965 | 0.873 | 0.664 | 0.0 | |
| Q94AH8 | 860 | Alpha,alpha-trehalose-pho | no | no | 0.958 | 0.869 | 0.649 | 0.0 | |
| Q9LMI0 | 851 | Probable alpha,alpha-treh | no | no | 0.982 | 0.900 | 0.627 | 0.0 | |
| Q9ZV48 | 862 | Probable alpha,alpha-treh | no | no | 0.923 | 0.835 | 0.637 | 0.0 | |
| Q54K57 | 733 | Alpha,alpha-trehalose-pho | yes | no | 0.839 | 0.893 | 0.360 | 1e-135 | |
| Q9FZ57 | 822 | Probable alpha,alpha-treh | no | no | 0.843 | 0.800 | 0.353 | 1e-116 | |
| Q9SYM4 | 942 | Alpha,alpha-trehalose-pho | no | no | 0.834 | 0.691 | 0.340 | 1e-112 |
| >sp|Q9LRA7|TPS9_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 OS=Arabidopsis thaliana GN=TPS9 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1288 bits (3333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/754 (80%), Positives = 676/754 (89%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGSRER 60
M SRSCANFLDLAS LLD PQT R LPRVMTVPGIIS+ DG S+ +S+ SRER
Sbjct: 1 MVSRSCANFLDLASWDLLDFPQTQRALPRVMTVPGIISELDGGYSDGSSDVNSSNSSRER 60
Query: 61 KIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQE 120
KIIVANMLPL AKRDTETG+WCFS DED LLL L+DGFSSDTE +Y+GSL ADI SEQE
Sbjct: 61 KIIVANMLPLQAKRDTETGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGISEQE 120
Query: 121 EVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAY 180
EV+ KLL DFNCVPTFLP ++Q+KFYLGFCK HLWPLFHYMLPM PDHGDRFDR LWQAY
Sbjct: 121 EVSHKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLWQAY 180
Query: 181 VSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
VSANKIF+D+VMEVINP++D VW+HDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
Query: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300
TLPVRD++LRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV+IK
Sbjct: 241 TLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIK 300
Query: 301 ILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLL 360
ILPVG+HMGRLESVLNLP+TA K+KEI++QF GKKLILG+DDMDIFKGISLKL+AME+L
Sbjct: 301 ILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAMERLF 360
Query: 361 QQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420
+ + MRGK+VL+QIVNPAR +GKDV+EAKKETY TAKRINE YGS Y+PV+LIDR VP
Sbjct: 361 ETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILIDRLVP 420
Query: 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE 480
R+EK+AYYA+A+CC+VNAVRDGMNLVPYKYI+CRQGTP MD+A+G DS TSMLVVSE
Sbjct: 421 RYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSARTSMLVVSE 480
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPWD+DAVA+A+ LA+ M ++EK+LRHEKHY YVSTHDV YWA+SF
Sbjct: 481 FIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKSF 540
Query: 541 AQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDG 600
QDLERACR+HY+KRCWGIG GL FRVLSLSPSFR+LSIDHIVS YR T+RRAIFLDYDG
Sbjct: 541 MQDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLDYDG 600
Query: 601 TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660
T+VPE+SIIK+P EV+SVLK+LC DP NTVF+VSGRG SLS+WL+PCE LGIAAEHGY
Sbjct: 601 TLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAEHGY 660
Query: 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFG 720
FIRW+ EWET + A+ EWK +VEPVMRSY +ATDGS IE KESALVWHHQDADPDFG
Sbjct: 661 FIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADPDFG 720
Query: 721 SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQ 754
+CQAKELLDHLESVLANEP VVKRGQHIVEVKPQ
Sbjct: 721 ACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQ 754
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 5 |
| >sp|O80738|TPS10_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1275 bits (3300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/754 (78%), Positives = 667/754 (88%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGSRER 60
M S+S N LDLASG LLDIPQTPR LPRVMTVPGIISD DGY +DGDSD S RER
Sbjct: 1 MGSKSFGNLLDLASGDLLDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCRER 60
Query: 61 KIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQE 120
KIIVAN LPL+ K+D+ETG+W FSLD D LLHLKDGFS +TEVIYVGSLK +D SEQ+
Sbjct: 61 KIIVANFLPLNGKKDSETGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSEQD 120
Query: 121 EVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAY 180
EV+ L ++FNCV TFLP D+ KKFYLGFCKQ LWPLFHYMLPMCPDHG+RFDR LWQAY
Sbjct: 121 EVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQAY 180
Query: 181 VSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
VSANKIFADKVM VIN ++D +W+HDYHLMVLPTFLR+RF+R+KLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
Query: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300
TLPVR+E+LRGLLNCDLIGFHTFDYARHFLSCC RMLGL+YESKRGHI LDY GRTV++K
Sbjct: 241 TLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVFLK 300
Query: 301 ILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLL 360
ILP+G+HMGRLESVLNLPATA K+KEI++++ GKK+ILG+DDMDIFKG+SLK+LA E LL
Sbjct: 301 ILPIGIHMGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEHLL 360
Query: 361 QQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420
QQ+P M GK+VL+QIVNPARGSGKDVQEA+KETY T KRINE YGS +YEPVVLIDRPVP
Sbjct: 361 QQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRPVP 420
Query: 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE 480
RFEKSAYYA+AECCIVNAVRDGMNLVPYKY VCRQGTP M+++LG D P TS LV+SE
Sbjct: 421 RFEKSAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLPRTSTLVLSE 480
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPWD+DAVAD++ AI M D EKQLRH+KH+ Y+STHDV YWARSF
Sbjct: 481 FIGCSPSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWARSF 540
Query: 541 AQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDG 600
+QDLERA RDHYSKRCWG+G GLGFR+++LSP+FRRLSI+ VSAYR++ +RAIFLDYDG
Sbjct: 541 SQDLERASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDYDG 600
Query: 601 TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660
T+VPETSI+K P EVIS LK LCSDPNNT+FIVSGRG+ SLSEWLAPCE LGIAAEHGY
Sbjct: 601 TLVPETSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEHGY 660
Query: 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFG 720
F RWNK+S+WET+ L DLEWKK+VEP+MR YTE TDGSNIE KESALVWHHQDADPDFG
Sbjct: 661 FTRWNKSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPDFG 720
Query: 721 SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQ 754
SCQAKELLDHLE+VL NEP +V RG IVEVKPQ
Sbjct: 721 SCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQ 754
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q0WUI9|TPS8_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 8 OS=Arabidopsis thaliana GN=TPS8 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1262 bits (3265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/754 (78%), Positives = 662/754 (87%), Gaps = 5/754 (0%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGSRER 60
M SRSCANFLDL+S LLD PQTPRTLPRVMTVPGII+D DG +++ S TS GSRER
Sbjct: 1 MVSRSCANFLDLSSWDLLDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTS--TSGGSRER 58
Query: 61 KIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQE 120
KIIVANMLPL +KRD ETG+WCF+ DED L L L+DGFSS+TE +YVGSL DI+ +EQE
Sbjct: 59 KIIVANMLPLQSKRDAETGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNEQE 118
Query: 121 EVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAY 180
EV+QKLL++FNCV TFL +LQ+ FYLGFCK LWPLFHYMLPM PDHGDRFDR LWQAY
Sbjct: 119 EVSQKLLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQAY 178
Query: 181 VSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
VSANKIF+D+VMEVINP+DD VW+ DYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR
Sbjct: 179 VSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 238
Query: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300
TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK
Sbjct: 239 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 298
Query: 301 ILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLL 360
ILPVGVHMGRLESVL+L +TA K KEI++QF GKKL+LGIDDMDIFKGISLKL+AME L
Sbjct: 299 ILPVGVHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEHLF 358
Query: 361 QQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420
+ + ++GKVVLVQIVNPAR SGKDV+EAK+ETY TA+RINE YG+ +Y+P+VLIDR VP
Sbjct: 359 ETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRLVP 418
Query: 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE 480
R EK+AYYA A+CC+VNAVRDGMNLVPYKYIVCRQGT + SP TS LVVSE
Sbjct: 419 RSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQGTRSNKAVVD---SSPRTSTLVVSE 475
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPWD+DAVA+A+ A+ M ++EKQLRHEKHY Y+STHDV YWA+SF
Sbjct: 476 FIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSF 535
Query: 541 AQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDG 600
QDLERACRDHYSKRCWGIG GLGFRVLSLSPSFR+LS++HIV YRKT+RRAIFLDYDG
Sbjct: 536 MQDLERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDG 595
Query: 601 TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660
T+VPE+SI++ P EV+SVLK LC DPNNTVFIVSGRGR SLS WL+PCE LGIAAEHGY
Sbjct: 596 TLVPESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGY 655
Query: 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFG 720
FIRW EWET + D EW+ +VEPVMRSY EATDG++IE KESALVWHHQDADPDFG
Sbjct: 656 FIRWKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFG 715
Query: 721 SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQ 754
SCQAKE+LDHLESVLANEP VVKRGQHIVEVKPQ
Sbjct: 716 SCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQ 749
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|O23617|TPS5_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana GN=TPS5 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1074 bits (2777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/755 (66%), Positives = 606/755 (80%), Gaps = 2/755 (0%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADG-YDSNDGDSDATSSGSRE 59
M SRS +N LDLASG + + PRV TV G++S+ D +SN SDA SS +++
Sbjct: 1 MVSRSYSNLLDLASGNFHSFSREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVTQD 60
Query: 60 RKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQ 119
R IIV N LP+ + R++ G+ FS D D LLL LKDG D EV+Y+G LK ID EQ
Sbjct: 61 RIIIVGNQLPIKSHRNS-AGKLSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTVEQ 119
Query: 120 EEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQA 179
++V+Q+LL++F CVP ++P +L K+Y GFCKQHLWPLFHYMLP+ PD G RFDR LWQA
Sbjct: 120 DDVSQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLWQA 179
Query: 180 YVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY 239
Y+S NKIFADKVMEVI+PDDD VWVHDYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSEIY
Sbjct: 180 YLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 239
Query: 240 RTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 299
RTLPVR+E+LR LLN DLIGFHTFDYARHFLSCCSRMLGL Y+SKRG IGL+Y+GRTV I
Sbjct: 240 RTLPVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTVSI 299
Query: 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQL 359
KILPVG+H+ +L+S+LNLP T TK+ E+ QF +K++LG+DDMDIFKGISLKLLAMEQL
Sbjct: 300 KILPVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAMEQL 359
Query: 360 LQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419
L QHP RG+VVLVQI NPARG GKDVQE + ET T KRINE++G P Y+PVVLID P+
Sbjct: 360 LTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDTPL 419
Query: 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479
FE+ AYY +AECC+V AVRDGMNL+PY+YI+CRQG P ++E +G + + SMLVVS
Sbjct: 420 QFFERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPSAAKKSMLVVS 479
Query: 480 EFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539
EFIGCSPSLSGAIRVNPW+IDAV +AM A+ + ++EKQ+RHEKH++YVSTHDVAYWARS
Sbjct: 480 EFIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWARS 539
Query: 540 FAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYD 599
F QDLERAC DH KRCWGIG GLGFRV++L PSF++LSI+HIVSAY++T+ RAI LDYD
Sbjct: 540 FIQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLDYD 599
Query: 600 GTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHG 659
GT+V SI +P E I +L L SDP N V++VSG+ R +L+EW + C+ LG+ AEHG
Sbjct: 600 GTMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAEHG 659
Query: 660 YFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDF 719
YFIR N ++WET+ L + EWK+I EPVMR YTE TDGS IE KE+ALVW++Q ADPDF
Sbjct: 660 YFIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADPDF 719
Query: 720 GSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQ 754
GSCQAKEL++HLESVL N+P VK GQ +VEVKPQ
Sbjct: 720 GSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQ 754
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q94AH8|TPS6_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana GN=TPS6 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1038 bits (2684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/771 (64%), Positives = 596/771 (77%), Gaps = 23/771 (2%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGSRER 60
M SRS +N L+LASG + R +PR+M V GI+S+ D DS T ++R
Sbjct: 1 MVSRSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIMSNIDN------DSKDTDLSPKDR 54
Query: 61 KIIVANMLPLHAKRDTETGR-------------WCFSLDEDLLLLHLKDGFSSDT-EVIY 106
IIVAN LP+ A+R + W FS DE+ LLL LKDG + EVIY
Sbjct: 55 IIIVANELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIY 114
Query: 107 VGSLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCP 166
VG LK +I +EQEEV Q LL+ F CVPTFLP DL ++Y GFCKQ LWPLFHYMLP+ P
Sbjct: 115 VGCLKEEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSP 174
Query: 167 DHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLG 226
D G RFDR LWQAYVS NKIFAD++MEVINP+DD VW+HDYHLMVLPTFLRKRFNR+KLG
Sbjct: 175 DLGGRFDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLG 234
Query: 227 FFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRG 286
FFLHSPFPSSEIY+TLP+R+E+LR LLN DLIGFHTFDYARHFLSCCSRMLGL YESKRG
Sbjct: 235 FFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRG 294
Query: 287 HIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMD 344
+IGL+Y+GRTV IKILPVG+HMG+L+SVL+LP T K+ E+ +++ G+ ++LG+DDMD
Sbjct: 295 YIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMD 354
Query: 345 IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVY 404
IFKGI+LKLLAMEQLL QHP +GKVVLVQI NPARG GKDV+E + ETY T KRINE +
Sbjct: 355 IFKGITLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETF 414
Query: 405 GSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEAL 464
G P Y+P+VLID P+ +E+ AYY VAECC+V AVRDGMNL+PY+YIV RQG +D+ L
Sbjct: 415 GRPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKIL 474
Query: 465 GRERDSPHT-SMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEK 523
E ++ + SMLVVSEFIGCSPSLSGAIRVNPW++DAVADAM A+ + + EKQLRHEK
Sbjct: 475 KLEANNRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEK 534
Query: 524 HYRYVSTHDVAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIV 583
HY+YVSTHDV YWARSF QDLER+C +H +RCWGIG GL FRV++L SFR+LS++HIV
Sbjct: 535 HYKYVSTHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIV 594
Query: 584 SAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS 643
SAY++T+ RAI LDYD T++P+ SI K P + I +L TLC D N VFIVS + R +LS
Sbjct: 595 SAYKRTKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLS 654
Query: 644 EWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEI 703
+W +PCE LGIAAEHGYF+R K EWE D WK+I EPVM YTE TDGS IE
Sbjct: 655 DWFSPCEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIED 714
Query: 704 KESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQ 754
KE+ALVW ++DADPDFGSCQAKELLDHLESVLANEP VKRGQ+ VEVKPQ
Sbjct: 715 KETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQ 765
|
Regulates plant architecture, shape of epidermal pavement cells and branching of trichomes. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9LMI0|TPS7_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1027 bits (2655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/776 (62%), Positives = 601/776 (77%), Gaps = 10/776 (1%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGSRER 60
M SRS N LDLASG + + R LPRVMTVPG +S+ D + SD SS S +R
Sbjct: 1 MISRSYTNLLDLASGNFPVMGRERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSSDR 60
Query: 61 KIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQE 120
IIVAN LPL A++ G W FS D+D L L LKDG D E++YVGSL D+D++EQ+
Sbjct: 61 MIIVANRLPLKAEK--RNGSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNEQD 118
Query: 121 EVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAY 180
+VAQ LLD F CVPTF P DLQ KFY GFCK+ +WPLFHYMLP DHG RFDR LW+AY
Sbjct: 119 DVAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWEAY 178
Query: 181 VSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
V+ NK+F KV+EVINPDDD VW+HDYHLMVLPTFLR+RFNRI++GFFLHSPFPSSEIYR
Sbjct: 179 VATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEIYR 238
Query: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300
+LPVR+EIL+ LLN DLIGFHTFDYARHFL+CCSRMLGL+Y+SKRG+IGL+Y+GRTV IK
Sbjct: 239 SLPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVGIK 298
Query: 301 ILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLL 360
I+PVG++MGR++SV+ K+ E+ +F+GK ++LGIDDMDIFKGI+LKLLAMEQ+L
Sbjct: 299 IMPVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQML 358
Query: 361 QQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420
+QHP RG+ VLVQIVNPARG G DV+E + E + +RIN +G P Y+P++ ID PV
Sbjct: 359 RQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTPVS 418
Query: 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERD--SPHTSMLVV 478
E +AYY +AEC +V AVRDGMNL PY+YIVCRQG LG E D P SMLV
Sbjct: 419 INEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQGL------LGSESDFSGPKKSMLVA 472
Query: 479 SEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538
SEFIGCSPSLSGAIRVNPW+++A +A+ A++M D+EKQLRHEKH+RYVSTHDVAYW+R
Sbjct: 473 SEFIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWSR 532
Query: 539 SFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDY 598
SF QDLER C DH+ KRCWG+G+ GFRV++L P+FR+LSI IVS Y++ + RAI LDY
Sbjct: 533 SFLQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLDY 592
Query: 599 DGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEH 658
DGT++P+ SI K+P EV++ L LC D N++FIVSGRGR SLS+W PC+ +GIAAEH
Sbjct: 593 DGTLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAEH 652
Query: 659 GYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPD 718
GYF++W+ + EWET +D W +IVEPVM+ YTE+TDGS+IEIKESALVW ++DADP
Sbjct: 653 GYFLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPG 712
Query: 719 FGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVRAR 774
FGS QAKE+L+HLESVLANEP VK G +IVEVKPQ + S+S + S+ + +
Sbjct: 713 FGSLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQGVSKGSVSEKIFSSMAGKGK 768
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9ZV48|TPS11_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 OS=Arabidopsis thaliana GN=TPS11 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 993 bits (2568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/723 (63%), Positives = 567/723 (78%), Gaps = 3/723 (0%)
Query: 33 VPGIISDADGYDSNDGDSDATSSGSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLL 92
+P ++ G +++D + A + + ++I+V+N LPL A RD + +WCF D D L L
Sbjct: 26 IPNAVTKLSGLETDDPNGGAWVT--KPKRIVVSNQLPLRAHRDISSNKWCFEFDNDSLYL 83
Query: 93 HLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQ 152
LKDGF +TEV+YVGSL AD+ SEQE+V+Q LL+ F CVPTFLP DL K+Y GFCK
Sbjct: 84 QLKDGFPPETEVVYVGSLNADVLPSEQEDVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKH 143
Query: 153 HLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVL 212
+LWP+FHY+LPM G FDR W+AY + NKIFADK+ EV+NPDDD VW+HDYHLM+L
Sbjct: 144 YLWPIFHYLLPMTQAQGSLFDRSNWRAYTTVNKIFADKIFEVLNPDDDYVWIHDYHLMIL 203
Query: 213 PTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272
PTFLR RF+RIKLG FLHSPFPSSEIYRTLPVRDEIL+G LNCDL+GFHTFDYARHFLSC
Sbjct: 204 PTFLRNRFHRIKLGIFLHSPFPSSEIYRTLPVRDEILKGFLNCDLVGFHTFDYARHFLSC 263
Query: 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFD 332
CSRMLGLDYESKRG+IGL+YFGRTV IKILPVG+HMG++ES+ TA K+K + ++F
Sbjct: 264 CSRMLGLDYESKRGYIGLEYFGRTVSIKILPVGIHMGQIESIKASEKTAEKVKRLRERFK 323
Query: 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKE 392
G ++LG+DD+D+FKGISLK AM QLL+Q+ +RGKVVLVQI NPAR SGKDVQ+ +K+
Sbjct: 324 GNIVMLGVDDLDMFKGISLKFWAMGQLLEQNEELRGKVVLVQITNPARSSGKDVQDVEKQ 383
Query: 393 TYLTAKRINEVYGSP-NYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYI 451
L A IN +G P Y+P+V I+ PV +K AYYA++EC +VNAVRDGMNLVPYKY
Sbjct: 384 INLIADEINSKFGRPGGYKPIVFINGPVSTLDKVAYYAISECVVVNAVRDGMNLVPYKYT 443
Query: 452 VCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAIN 511
V RQG+P +D ALG D S+++VSEFIGCSPSLSGAIRVNPW+IDAV +AM+ A+
Sbjct: 444 VTRQGSPALDAALGFGEDDVRKSVIIVSEFIGCSPSLSGAIRVNPWNIDAVTNAMSSAMT 503
Query: 512 MRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLS 571
M D EK LRH+KH++Y+S+H+VAYWARS+ QDL+RAC+DHY+KR WG+G GL F+V++L
Sbjct: 504 MSDKEKNLRHQKHHKYISSHNVAYWARSYDQDLQRACKDHYNKRFWGVGFGLFFKVVALD 563
Query: 572 PSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTV 631
P+FRRL + IV AYR++ R I LDYDGT++ + ++ K P ++IS+L LC DP+N V
Sbjct: 564 PNFRRLCGETIVPAYRRSSSRLILLDYDGTMMDQDTLDKRPSDDLISLLNRLCDDPSNLV 623
Query: 632 FIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRS 691
FIVSGRG+ LS+W C LGI+AEHGYF RWN S WET+ L ADL WKKI +PVM
Sbjct: 624 FIVSGRGKDPLSKWFDSCPNLGISAEHGYFTRWNSNSPWETSELPADLSWKKIAKPVMNH 683
Query: 692 YTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEV 751
Y EATDGS IE KESA+VWHHQ+AD FGS QAKELLDHLESVL NEP VVKRGQHIVEV
Sbjct: 684 YMEATDGSFIEEKESAMVWHHQEADHSFGSWQAKELLDHLESVLTNEPVVVKRGQHIVEV 743
Query: 752 KPQ 754
KPQ
Sbjct: 744 KPQ 746
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q54K57|TPSA_DICDI Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A OS=Dictyostelium discoideum GN=tpsA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 484 bits (1245), Expect = e-135, Method: Compositional matrix adjust.
Identities = 255/708 (36%), Positives = 414/708 (58%), Gaps = 53/708 (7%)
Query: 55 SGSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADI 114
+G R I+V+N LP+ K+++ G+W + L+ L G S+ I+VG + A+I
Sbjct: 12 TGFSGRLIVVSNRLPVSIKKES-NGKWSCKMSSGGLVAAL-SGLKSN--FIWVGWIGAEI 67
Query: 115 DASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDR 174
+ +++E+ + L D++C+P FL + + Y GF LWPLFHY LP D+ DR
Sbjct: 68 EEDDRKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHY-LPGDLDYDDR--- 123
Query: 175 VLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFP 234
+W +YV AN+ F+ V E++ P+D VWVHDYH+M+LP L+++ ++GFFLH PFP
Sbjct: 124 -IWNSYVEANEQFSSVVAEILKPND-LVWVHDYHMMLLPEILKQKKPDARIGFFLHIPFP 181
Query: 235 SSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFG 294
SSEI+R LP R EIL G+LNC LIGFHT+DYARHFL C+R++GL+ G+ +
Sbjct: 182 SSEIFRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN----GVYFKD 237
Query: 295 RTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLL 354
R V + + PVG+ + L +IKE+++ F+G K+++GID +D KGI KL
Sbjct: 238 RFVQVGVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLDYIKGIPQKLQ 297
Query: 355 AMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVL 414
A+E+L Q++P +GK+VL+Q+ P+R ++ Q+ KKE RIN +YGS Y P+
Sbjct: 298 AIERLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLYGSIGYSPIHY 357
Query: 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTS 474
+ + V E +A Y +++ ++ ++RDGMNLV +YIVC+ + +
Sbjct: 358 LFQSVDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQ---------------TENNG 402
Query: 475 MLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVA 534
+L++SEF G + SLSGA+ +NPW+ + VAD++ ++ M E++ +H+ +YV+ H +
Sbjct: 403 VLILSEFTGAAQSLSGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQMLLKYVTKHTAS 462
Query: 535 YWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAI 594
+W F ++L +A + + ++L I+ +V Y++++RR +
Sbjct: 463 HWGLGFVKELNKASSN-----------------TDKMVTIQKLDIEKVVDIYKQSKRRLL 505
Query: 595 FLDYDGTVVPETSI--IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML 652
YDGT++P ++ + P E+++ L +DP V+I+SGR + +LSEW + +
Sbjct: 506 IFAYDGTLIPYNNVPQLSRPSQELLNSFDILSNDPKTDVYILSGRDKKTLSEWFLGIQ-I 564
Query: 653 GIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHH 712
G++AE+G F + +++EWE DL WK+ + P+ + +T T GS E KE WH+
Sbjct: 565 GLSAEYGCFFKLPESTEWEQQVPSMDLSWKETIRPLFKYFTLRTPGSFFEEKEMLFTWHY 624
Query: 713 QDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSS 760
++ADP FGS QA+EL HL+ N P V G + V+ + P S
Sbjct: 625 RNADPIFGSIQARELHLHLD----NLPLDVIVGDKTLGVRSYNINPLS 668
|
Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9FZ57|TPS2_ARATH Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2 OS=Arabidopsis thaliana GN=TPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 250/708 (35%), Positives = 388/708 (54%), Gaps = 50/708 (7%)
Query: 54 SSGSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKAD 113
+ G R R ++VAN LP+ AKR E W + L+ L G +S + +VG D
Sbjct: 7 ARGERPRLLVVANRLPVSAKRTGENS-WSLEMSPGGLVSGLL-GITSQFDTKWVGWPGVD 64
Query: 114 IDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYM-LPMCPDH-GDR 171
+ ++ + L + C+P FL + + ++Y G+C LWP+ H+M LP H ++
Sbjct: 65 VHDEIEKNALTESLAEMKCIPVFL-NGVFDQYYNGYCNGILWPILHHMGLPQEDQHDTNQ 123
Query: 172 FDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHS 231
+ AY AN++F D +++ + D VW HDYHLM LP +L++ N+IK+G+FLHS
Sbjct: 124 TFETQYDAYKKANRMFLDVIIDNYE-EGDIVWCHDYHLMFLPQYLKEYNNKIKVGWFLHS 182
Query: 232 PFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD 291
PFPSSE+Y+TLP R E+LR +L DL+GFHT+D+ARHFLS C+R+LG++ H G+
Sbjct: 183 PFPSSEVYKTLPSRSELLRAILAADLLGFHTYDFARHFLSTCTRILGVE----GTHEGVV 238
Query: 292 YFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISL 351
Y GR + + P+G+ R LP ++ E++++F GKK+ILG+D +D+ KGI
Sbjct: 239 YQGRVTRVAVFPIGIDPDRFIRTCKLPEVTQQMNELQEKFAGKKVILGVDRLDMIKGIPQ 298
Query: 352 KLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411
K LA E+ L+++P R KVVLVQI P R + ++ K + + RIN +GS + P
Sbjct: 299 KYLAFEKFLEENPYWRDKVVLVQIAVPTRNDVPEYRKLKSQVHGLVGRINGRFGSVSSLP 358
Query: 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSP 471
+ +D V A YA+A+ +V ++RDGMNLV Y+++ C++
Sbjct: 359 IHHLDCSVDFNYLCAIYAIADVMLVTSLRDGMNLVSYEFVACQEA--------------- 403
Query: 472 HTSMLVVSEFIGCSPSLS-GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530
+LV+SEF G SL GA+ VNPWD+ V+ A+ A+NM E++ RH +++YV T
Sbjct: 404 KKGVLVLSEFAGAGQSLGVGALIVNPWDVTEVSSAIKEALNMPAEERETRHRSNFQYVCT 463
Query: 531 HDVAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTE 590
H W F +L + + R + L +L ++ Y ++
Sbjct: 464 HSAEKWGLDFMSELNGIIPES----------EMQMRKIPL-----QLPEQDVIQQYSQSN 508
Query: 591 RRAIFLDYDGTVV-PETSIIKSP----GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEW 645
R I L + GT+ P S K PE+ LK LC+DP TV ++S G++ L++
Sbjct: 509 NRLIILGFFGTLAEPMNSGTKEMDLKLNPELKGTLKALCNDPKTTVVVLSRSGKNILNKN 568
Query: 646 LAPCEMLGIAAEHGYFIRWNKTSEWETNH-LGADLEWKKIVEPVMRSYTEATDGSNIEIK 704
+ +AAE+G F + T EW TN +L+W V+ V + +T+ T S E
Sbjct: 569 FGESNIW-LAAENGMFEK-QTTGEWVTNMPQNVNLDWVDGVKNVFKYFTDRTPRSYFEAS 626
Query: 705 ESALVWHHQDADPDFGSCQAKELLDHL-ESVLANEPAVVKRGQHIVEV 751
E++LVW+++ AD +FG QA++LL +L ++N V RG H VEV
Sbjct: 627 ETSLVWNYEYADVEFGRAQARDLLQYLWAGPISNASVDVVRGNHSVEV 674
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
| >sp|Q9SYM4|TPS1_ARATH Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 OS=Arabidopsis thaliana GN=TPS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 244/717 (34%), Positives = 386/717 (53%), Gaps = 66/717 (9%)
Query: 57 SRERKIIVANMLPLHAKRDTETGRWCFSLDEDLL---LLHLKDGFSSDTEVIYVGSLKAD 113
+R+R ++VAN LP+ A R E W + L LL +K+ E ++G +
Sbjct: 90 NRQRLLVVANRLPVSAVRRGEDS-WSLEISAGGLVSALLGVKE-----FEARWIGWAGVN 143
Query: 114 IDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDH--GDR 171
+ ++ K L + C+P FL ++ ++Y G+C LWPLFHY+ D R
Sbjct: 144 VPDEVGQKALSKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTR 203
Query: 172 FDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHS 231
+ + AY AN++FAD V E + D VW HDYHLM LP L++ +++K+G+FLH+
Sbjct: 204 SFQSQFAAYKKANQMFADVVNEHYE-EGDVVWCHDYHLMFLPKCLKEYNSKMKVGWFLHT 262
Query: 232 PFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD 291
PFPSSEI+RTLP R E+LR +L DL+GFHT+DYARHF+S C+R+LGL+ + G++
Sbjct: 263 PFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPE----GVE 318
Query: 292 YFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISL 351
GR + P+G+ R L +P +KE++++F G+K++LG+D +D+ KGI
Sbjct: 319 DQGRLTRVAAFPIGIDSDRFIRALEVPEVIQHMKELKERFAGRKVMLGVDRLDMIKGIPQ 378
Query: 352 KLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411
K+LA E+ L+++ R KVVL+QI P R + Q+ + + RIN +G+ P
Sbjct: 379 KILAFEKFLEENANWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVP 438
Query: 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSP 471
+ +DR + A YAV + +V ++RDGMNLV Y+++ C++
Sbjct: 439 IHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEAK-------------- 484
Query: 472 HTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530
+L++SEF G + SL +GAI VNPW+I VA ++ A+NM E++ RH ++ +V T
Sbjct: 485 -KGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGQALNMTAEEREKRHRHNFHHVKT 543
Query: 531 HDVAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTE 590
H WA +F +L + R+ + P L + Y K+
Sbjct: 544 HTAQEWAETFVSELNDTV------------IEAQLRISKVPPE---LPQHDAIQRYSKSN 588
Query: 591 RRAIFLDYDGTVVPETSIIKSPG-----------PEVISVLKTLCSDPNNTVFIVSGRGR 639
R + L ++ T+ G PE+ LK LCSDP+ T+ ++SG R
Sbjct: 589 NRLLILGFNATLTEPVDNQGRRGDQIKEMDLNLHPELKGPLKALCSDPSTTIVVLSGSSR 648
Query: 640 SSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETN---HLGADLEWKKIVEPVMRSYTEAT 696
S L + +M +AAE+G F+R EW T HL ++EW V+ V + +TE T
Sbjct: 649 SVLDKNFGEYDMW-LAAENGMFLRLT-NGEWMTTMPEHL--NMEWVDSVKHVFKYFTERT 704
Query: 697 DGSNIEIKESALVWHHQDADPDFGSCQAKELLDHL-ESVLANEPAVVKRGQHIVEVK 752
S+ E ++++L+W+++ AD +FG QA++LL HL ++N V +G VEV+
Sbjct: 705 PRSHFETRDTSLIWNYKYADIEFGRLQARDLLQHLWTGPISNASVDVVQGSRSVEVR 761
|
Required for normal embryo development, vegetative growth and transition to flowering. Regulates embryo growth, cell wall deposition, starch and sucrose degradation, but not cell differentiation. Involved in the regulation of glucose sensing and signaling genes during plant development. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 5 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 780 | ||||||
| TAIR|locus:2199847 | 867 | TPS9 "trehalose-phosphatase/sy | 0.965 | 0.868 | 0.798 | 0.0 | |
| TAIR|locus:2195678 | 861 | TPS10 "trehalose phosphate syn | 0.966 | 0.875 | 0.774 | 0.0 | |
| TAIR|locus:2016179 | 856 | TPS8 "trehalose-6-phosphatase | 0.960 | 0.875 | 0.781 | 0.0 | |
| TAIR|locus:2129425 | 862 | TPS5 "trehalose phosphatase/sy | 0.965 | 0.873 | 0.654 | 1.6e-276 | |
| TAIR|locus:2202290 | 851 | TPS7 "trehalose-phosphatase/sy | 0.956 | 0.876 | 0.630 | 1.1e-266 | |
| TAIR|locus:2200216 | 860 | ATTPS6 [Arabidopsis thaliana ( | 0.965 | 0.875 | 0.635 | 1.2e-264 | |
| TAIR|locus:2054027 | 862 | TPS11 "trehalose phosphatase/s | 0.923 | 0.835 | 0.627 | 3.4e-258 | |
| ASPGD|ASPL0000037859 | 908 | orlA [Emericella nidulans (tax | 0.432 | 0.371 | 0.354 | 2e-95 | |
| DICTYBASE|DDB_G0287657 | 733 | tpsA "alpha,alpha-trehalose-ph | 0.606 | 0.645 | 0.375 | 7.8e-94 | |
| TAIR|locus:2137712 | 795 | TPS4 "trehalose-6-phosphatase | 0.788 | 0.773 | 0.333 | 1.6e-93 |
| TAIR|locus:2199847 TPS9 "trehalose-phosphatase/synthase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3248 (1148.4 bits), Expect = 0., P = 0.
Identities = 603/755 (79%), Positives = 669/755 (88%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGS-RE 59
M SRSCANFLDLAS LLD PQT R LPRVMTVPGIIS+ DG S DG SD SS S RE
Sbjct: 1 MVSRSCANFLDLASWDLLDFPQTQRALPRVMTVPGIISELDGGYS-DGSSDVNSSNSSRE 59
Query: 60 RKIIVANMLPLHAKRDTETGRWCFSXXXXXXXXXXXXGFSSDTEVIYVGSLKADIDASEQ 119
RKIIVANMLPL AKRDTETG+WCFS GFSSDTE +Y+GSL ADI SEQ
Sbjct: 60 RKIIVANMLPLQAKRDTETGQWCFSWDEDSLLLQLRDGFSSDTEFVYIGSLNADIGISEQ 119
Query: 120 EEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQA 179
EEV+ KLL DFNCVPTFLP ++Q+KFYLGFCK HLWPLFHYMLPM PDHGDRFDR LWQA
Sbjct: 120 EEVSHKLLLDFNCVPTFLPKEMQEKFYLGFCKHHLWPLFHYMLPMFPDHGDRFDRRLWQA 179
Query: 180 YVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY 239
YVSANKIF+D+VMEVINP++D VW+HDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY
Sbjct: 180 YVSANKIFSDRVMEVINPEEDYVWIHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY 239
Query: 240 RTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 299
RTLPVRD++LRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV+I
Sbjct: 240 RTLPVRDDLLRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFI 299
Query: 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQL 359
KILPVG+HMGRLESVLNLP+TA K+KEI++QF GKKLILG+DDMDIFKGISLKL+AME+L
Sbjct: 300 KILPVGIHMGRLESVLNLPSTAAKMKEIQEQFKGKKLILGVDDMDIFKGISLKLIAMERL 359
Query: 360 LQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419
+ + MRGK+VL+QIVNPAR +GKDV+EAKKETY TAKRINE YGS Y+PV+LIDR V
Sbjct: 360 FETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINERYGSAGYQPVILIDRLV 419
Query: 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479
PR+EK+AYYA+A+CC+VNAVRDGMNLVPYKYI+CRQGTP MD+A+G DS TSMLVVS
Sbjct: 420 PRYEKTAYYAMADCCLVNAVRDGMNLVPYKYIICRQGTPGMDKAMGISHDSARTSMLVVS 479
Query: 480 EFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539
EFIGCSPSLSGAIRVNPWD+DAVA+A+ LA+ M ++EK+LRHEKHY YVSTHDV YWA+S
Sbjct: 480 EFIGCSPSLSGAIRVNPWDVDAVAEAVNLALTMGETEKRLRHEKHYHYVSTHDVGYWAKS 539
Query: 540 FAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYD 599
F QDLERACR+HY+KRCWGIG GL FRVLSLSPSFR+LSIDHIVS YR T+RRAIFLDYD
Sbjct: 540 FMQDLERACREHYNKRCWGIGFGLSFRVLSLSPSFRKLSIDHIVSTYRNTQRRAIFLDYD 599
Query: 600 GTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHG 659
GT+VPE+SIIK+P EV+SVLK+LC DP NTVF+VSGRG SLS+WL+PCE LGIAAEHG
Sbjct: 600 GTLVPESSIIKTPNAEVLSVLKSLCGDPKNTVFVVSGRGWESLSDWLSPCENLGIAAEHG 659
Query: 660 YFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDF 719
YFIRW+ EWET + A+ EWK +VEPVMRSY +ATDGS IE KESALVWHHQDADPDF
Sbjct: 660 YFIRWSSKKEWETCYSSAEAEWKTMVEPVMRSYMDATDGSTIEYKESALVWHHQDADPDF 719
Query: 720 GSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQ 754
G+CQAKELLDHLESVLANEP VVKRGQHIVEVKPQ
Sbjct: 720 GACQAKELLDHLESVLANEPVVVKRGQHIVEVKPQ 754
|
|
| TAIR|locus:2195678 TPS10 "trehalose phosphate synthase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3190 (1128.0 bits), Expect = 0., P = 0.
Identities = 584/754 (77%), Positives = 658/754 (87%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGSRER 60
M S+S N LDLASG LLDIPQTPR LPRVMTVPGIISD DGY +DGDSD S RER
Sbjct: 1 MGSKSFGNLLDLASGDLLDIPQTPRYLPRVMTVPGIISDVDGYGISDGDSDVISLPCRER 60
Query: 61 KIIVANMLPLHAKRDTETGRWCFSXXXXXXXXXXXXGFSSDTEVIYVGSLKADIDASEQE 120
KIIVAN LPL+ K+D+ETG+W FS GFS +TEVIYVGSLK +D SEQ+
Sbjct: 61 KIIVANFLPLNGKKDSETGKWKFSLDNDSPLLHLKDGFSPETEVIYVGSLKTHVDVSEQD 120
Query: 121 EVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAY 180
EV+ L ++FNCV TFLP D+ KKFYLGFCKQ LWPLFHYMLPMCPDHG+RFDR LWQAY
Sbjct: 121 EVSHNLFEEFNCVATFLPQDVHKKFYLGFCKQQLWPLFHYMLPMCPDHGERFDRGLWQAY 180
Query: 181 VSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
VSANKIFADKVM VIN ++D +W+HDYHLMVLPTFLR+RF+R+KLGFFLHSPFPSSEIYR
Sbjct: 181 VSANKIFADKVMGVINLEEDYIWIHDYHLMVLPTFLRRRFHRVKLGFFLHSPFPSSEIYR 240
Query: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300
TLPVR+E+LRGLLNCDLIGFHTFDYARHFLSCC RMLGL+YESKRGHI LDY GRTV++K
Sbjct: 241 TLPVREELLRGLLNCDLIGFHTFDYARHFLSCCCRMLGLEYESKRGHIALDYLGRTVFLK 300
Query: 301 ILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLL 360
ILP+G+HMGRLESVLNLPATA K+KEI++++ GKK+ILG+DDMDIFKG+SLK+LA E LL
Sbjct: 301 ILPIGIHMGRLESVLNLPATAEKLKEIQEKYRGKKIILGVDDMDIFKGLSLKILAFEHLL 360
Query: 361 QQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420
QQ+P M GK+VL+QIVNPARGSGKDVQEA+KETY T KRINE YGS +YEPVVLIDRPVP
Sbjct: 361 QQYPSMLGKIVLIQIVNPARGSGKDVQEARKETYDTVKRINERYGSHDYEPVVLIDRPVP 420
Query: 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE 480
RFEKSAYYA+AECCIVNAVRDGMNLVPYKY VCRQGTP M+++LG D P TS LV+SE
Sbjct: 421 RFEKSAYYALAECCIVNAVRDGMNLVPYKYTVCRQGTPSMNKSLGVSDDLPRTSTLVLSE 480
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPWD+DAVAD++ AI M D EKQLRH+KH+ Y+STHDV YWARSF
Sbjct: 481 FIGCSPSLSGAIRVNPWDVDAVADSLYSAITMSDFEKQLRHKKHFHYISTHDVGYWARSF 540
Query: 541 AQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDG 600
+QDLERA RDHYSKRCWG+G GLGFR+++LSP+FRRLSI+ VSAYR++ +RAIFLDYDG
Sbjct: 541 SQDLERASRDHYSKRCWGVGWGLGFRLVALSPNFRRLSIEQTVSAYRRSSKRAIFLDYDG 600
Query: 601 TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660
T+VPETSI+K P EVIS LK LCSDPNNT+FIVSGRG+ SLSEWLAPCE LGIAAEHGY
Sbjct: 601 TLVPETSIVKDPSAEVISALKALCSDPNNTIFIVSGRGKVSLSEWLAPCENLGIAAEHGY 660
Query: 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFG 720
F RWNK+S+WET+ L DLEWKK+VEP+MR YTE TDGSNIE KESALVWHHQDADPDFG
Sbjct: 661 FTRWNKSSDWETSGLSDDLEWKKVVEPIMRLYTETTDGSNIEAKESALVWHHQDADPDFG 720
Query: 721 SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQ 754
SCQAKELLDHLE+VL NEP +V RG IVEVKPQ
Sbjct: 721 SCQAKELLDHLETVLVNEPVIVNRGHQIVEVKPQ 754
|
|
| TAIR|locus:2016179 TPS8 "trehalose-6-phosphatase synthase S8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3155 (1115.7 bits), Expect = 0., P = 0.
Identities = 589/754 (78%), Positives = 657/754 (87%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGSRER 60
M SRSCANFLDL+S LLD PQTPRTLPRVMTVPGII+D DG +++ S TS GSRER
Sbjct: 1 MVSRSCANFLDLSSWDLLDFPQTPRTLPRVMTVPGIITDVDGDTTSEVTS--TSGGSRER 58
Query: 61 KIIVANMLPLHAKRDTETGRWCFSXXXXXXXXXXXXGFSSDTEVIYVGSLKADIDASEQE 120
KIIVANMLPL +KRD ETG+WCF+ GFSS+TE +YVGSL DI+ +EQE
Sbjct: 59 KIIVANMLPLQSKRDAETGKWCFNWDEDSLQLQLRDGFSSETEFLYVGSLNVDIETNEQE 118
Query: 121 EVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAY 180
EV+QKLL++FNCV TFL +LQ+ FYLGFCK LWPLFHYMLPM PDHGDRFDR LWQAY
Sbjct: 119 EVSQKLLEEFNCVATFLSQELQEMFYLGFCKHQLWPLFHYMLPMFPDHGDRFDRRLWQAY 178
Query: 181 VSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
VSANKIF+D+VMEVINP+DD VW+ DYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR
Sbjct: 179 VSANKIFSDRVMEVINPEDDYVWIQDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 238
Query: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300
TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK
Sbjct: 239 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 298
Query: 301 ILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLL 360
ILPVGVHMGRLESVL+L +TA K KEI++QF GKKL+LGIDDMDIFKGISLKL+AME L
Sbjct: 299 ILPVGVHMGRLESVLSLDSTAAKTKEIQEQFKGKKLVLGIDDMDIFKGISLKLIAMEHLF 358
Query: 361 QQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420
+ + ++GKVVLVQIVNPAR SGKDV+EAK+ETY TA+RINE YG+ +Y+P+VLIDR VP
Sbjct: 359 ETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINERYGTSDYKPIVLIDRLVP 418
Query: 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE 480
R EK+AYYA A+CC+VNAVRDGMNLVPYKYIVCRQGT ++A+ SP TS LVVSE
Sbjct: 419 RSEKTAYYAAADCCLVNAVRDGMNLVPYKYIVCRQGTR-SNKAV--VDSSPRTSTLVVSE 475
Query: 481 FIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSF 540
FIGCSPSLSGAIRVNPWD+DAVA+A+ A+ M ++EKQLRHEKHY Y+STHDV YWA+SF
Sbjct: 476 FIGCSPSLSGAIRVNPWDVDAVAEAVNSALKMSETEKQLRHEKHYHYISTHDVGYWAKSF 535
Query: 541 AQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDG 600
QDLERACRDHYSKRCWGIG GLGFRVLSLSPSFR+LS++HIV YRKT+RRAIFLDYDG
Sbjct: 536 MQDLERACRDHYSKRCWGIGFGLGFRVLSLSPSFRKLSVEHIVPVYRKTQRRAIFLDYDG 595
Query: 601 TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660
T+VPE+SI++ P EV+SVLK LC DPNNTVFIVSGRGR SLS WL+PCE LGIAAEHGY
Sbjct: 596 TLVPESSIVQDPSNEVVSVLKALCEDPNNTVFIVSGRGRESLSNWLSPCENLGIAAEHGY 655
Query: 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFG 720
FIRW EWET + D EW+ +VEPVMRSY EATDG++IE KESALVWHHQDADPDFG
Sbjct: 656 FIRWKSKDEWETCYSPTDTEWRSMVEPVMRSYMEATDGTSIEFKESALVWHHQDADPDFG 715
Query: 721 SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQ 754
SCQAKE+LDHLESVLANEP VVKRGQHIVEVKPQ
Sbjct: 716 SCQAKEMLDHLESVLANEPVVVKRGQHIVEVKPQ 749
|
|
| TAIR|locus:2129425 TPS5 "trehalose phosphatase/synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2658 (940.7 bits), Expect = 1.6e-276, P = 1.6e-276
Identities = 494/755 (65%), Positives = 598/755 (79%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADG-YDSNDGDSDATSSGSRE 59
M SRS +N LDLASG + + PRV TV G++S+ D +SN SDA SS +++
Sbjct: 1 MVSRSYSNLLDLASGNFHSFSREKKRFPRVATVTGVLSELDDDNNSNSVCSDAPSSVTQD 60
Query: 60 RKIIVANMLPLHAKRDTETGRWCFSXXXXXXXXXXXXGFSSDTEVIYVGSLKADIDASEQ 119
R IIV N LP+ + R++ G+ FS G D EV+Y+G LK ID EQ
Sbjct: 61 RIIIVGNQLPIKSHRNS-AGKLSFSWDNDSLLLQLKDGMREDMEVVYIGCLKEQIDTVEQ 119
Query: 120 EEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQA 179
++V+Q+LL++F CVP ++P +L K+Y GFCKQHLWPLFHYMLP+ PD G RFDR LWQA
Sbjct: 120 DDVSQRLLENFKCVPAYIPPELFTKYYHGFCKQHLWPLFHYMLPLTPDLGGRFDRSLWQA 179
Query: 180 YVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY 239
Y+S NKIFADKVMEVI+PDDD VWVHDYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSEIY
Sbjct: 180 YLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIY 239
Query: 240 RTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 299
RTLPVR+E+LR LLN DLIGFHTFDYARHFLSCCSRMLGL Y+SKRG IGL+Y+GRTV I
Sbjct: 240 RTLPVRNELLRALLNADLIGFHTFDYARHFLSCCSRMLGLSYQSKRGTIGLEYYGRTVSI 299
Query: 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQL 359
KILPVG+H+ +L+S+LNLP T TK+ E+ QF +K++LG+DDMDIFKGISLKLLAMEQL
Sbjct: 300 KILPVGIHISQLQSILNLPETQTKVAELRDQFLDQKVLLGVDDMDIFKGISLKLLAMEQL 359
Query: 360 LQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419
L QHP RG+VVLVQI NPARG GKDVQE + ET T KRINE++G P Y+PVVLID P+
Sbjct: 360 LTQHPEKRGRVVLVQIANPARGRGKDVQEVQSETEATVKRINEMFGRPGYQPVVLIDTPL 419
Query: 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479
FE+ AYY +AECC+V AVRDGMNL+PY+YI+CRQG P ++E +G + + SMLVVS
Sbjct: 420 QFFERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGNPKLNETIGLDPSAAKKSMLVVS 479
Query: 480 EFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539
EFIGCSPSLSGAIRVNPW+IDAV +AM A+ + ++EKQ+RHEKH++YVSTHDVAYWARS
Sbjct: 480 EFIGCSPSLSGAIRVNPWNIDAVTEAMDYALIVSEAEKQMRHEKHHKYVSTHDVAYWARS 539
Query: 540 FAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYD 599
F QDLERAC DH KRCWGIG GLGFRV++L PSF++LSI+HIVSAY++T+ RAI LDYD
Sbjct: 540 FIQDLERACGDHVRKRCWGIGFGLGFRVVALDPSFKKLSIEHIVSAYKRTKNRAILLDYD 599
Query: 600 GTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHG 659
GT+V SI +P E I +L L SDP N V++VSG+ R +L+EW + C+ LG+ AEHG
Sbjct: 600 GTMVQPGSIRTTPTRETIEILNNLSSDPKNIVYLVSGKDRRTLTEWFSSCDDLGLGAEHG 659
Query: 660 YFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDF 719
YFIR N ++WET+ L + EWK+I EPVMR YTE TDGS IE KE+ALVW++Q ADPDF
Sbjct: 660 YFIRPNDGTDWETSSLVSGFEWKQIAEPVMRLYTETTDGSTIETKETALVWNYQFADPDF 719
Query: 720 GSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQ 754
GSCQAKEL++HLESVL N+P VK GQ +VEVKPQ
Sbjct: 720 GSCQAKELMEHLESVLTNDPVSVKTGQQLVEVKPQ 754
|
|
| TAIR|locus:2202290 TPS7 "trehalose-phosphatase/synthase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2565 (908.0 bits), Expect = 1.1e-266, P = 1.1e-266
Identities = 477/756 (63%), Positives = 584/756 (77%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGSRER 60
M SRS N LDLASG + + R LPRVMTVPG +S+ D + SD SS S +R
Sbjct: 1 MISRSYTNLLDLASGNFPVMGRERRRLPRVMTVPGNVSEFDEDQAYSVSSDNPSSVSSDR 60
Query: 61 KIIVANMLPLHAKRDTETGRWCFSXXXXXXXXXXXXGFSSDTEVIYVGSLKADIDASEQE 120
IIVAN LPL A++ G W FS G D E++YVGSL D+D++EQ+
Sbjct: 61 MIIVANRLPLKAEK--RNGSWSFSWDQDSLYLQLKDGLPEDMEILYVGSLSVDVDSNEQD 118
Query: 121 EVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAY 180
+VAQ LLD F CVPTF P DLQ KFY GFCK+ +WPLFHYMLP DHG RFDR LW+AY
Sbjct: 119 DVAQILLDKFKCVPTFFPPDLQSKFYDGFCKRQIWPLFHYMLPFSADHGGRFDRSLWEAY 178
Query: 181 VSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR 240
V+ NK+F KV+EVINPDDD VW+HDYHLMVLPTFLR+RFNRI++GFFLHSPFPSSEIYR
Sbjct: 179 VATNKLFFQKVIEVINPDDDFVWIHDYHLMVLPTFLRRRFNRIRMGFFLHSPFPSSEIYR 238
Query: 241 TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300
+LPVR+EIL+ LLN DLIGFHTFDYARHFL+CCSRMLGL+Y+SKRG+IGL+Y+GRTV IK
Sbjct: 239 SLPVREEILKALLNSDLIGFHTFDYARHFLTCCSRMLGLEYQSKRGYIGLEYYGRTVGIK 298
Query: 301 ILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLL 360
I+PVG++MGR++SV+ K+ E+ +F+GK ++LGIDDMDIFKGI+LKLLAMEQ+L
Sbjct: 299 IMPVGINMGRIQSVMRYSEEEGKVMELRNRFEGKTVLLGIDDMDIFKGINLKLLAMEQML 358
Query: 361 QQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420
+QHP RG+ VLVQIVNPARG G DV+E + E + +RIN +G P Y+P++ ID PV
Sbjct: 359 RQHPNWRGRAVLVQIVNPARGKGIDVEEIRGEIEESCRRINGEFGKPGYQPIIYIDTPVS 418
Query: 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERD--SPHTSMLVV 478
E +AYY +AEC +V AVRDGMNL PY+YIVCRQG LG E D P SMLV
Sbjct: 419 INEINAYYHIAECVVVTAVRDGMNLTPYEYIVCRQGL------LGSESDFSGPKKSMLVA 472
Query: 479 SEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538
SEFIGCSPSLSGAIRVNPW+++A +A+ A++M D+EKQLRHEKH+RYVSTHDVAYW+R
Sbjct: 473 SEFIGCSPSLSGAIRVNPWNVEATGEALNEALSMSDAEKQLRHEKHFRYVSTHDVAYWSR 532
Query: 539 SFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDY 598
SF QDLER C DH+ KRCWG+G+ GFRV++L P+FR+LSI IVS Y++ + RAI LDY
Sbjct: 533 SFLQDLERICVDHFKKRCWGMGISFGFRVVALDPNFRKLSIPCIVSDYKRAKSRAILLDY 592
Query: 599 DGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEH 658
DGT++P+ SI K+P EV++ L LC D N++FIVSGRGR SLS+W PC+ +GIAAEH
Sbjct: 593 DGTLMPQNSINKAPSQEVLNFLDALCEDKKNSIFIVSGRGRESLSKWFTPCKKIGIAAEH 652
Query: 659 GYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPD 718
GYF++W+ + EWET +D W +IVEPVM+ YTE+TDGS+IEIKESALVW ++DADP
Sbjct: 653 GYFLKWSGSEEWETCGQSSDFGWMQIVEPVMKQYTESTDGSSIEIKESALVWQYRDADPG 712
Query: 719 FGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQ 754
FGS QAKE+L+HLESVLANEP VK G +IVEVKPQ
Sbjct: 713 FGSLQAKEMLEHLESVLANEPVAVKSGHYIVEVKPQ 748
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| TAIR|locus:2200216 ATTPS6 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2546 (901.3 bits), Expect = 1.2e-264, P = 1.2e-264
Identities = 487/766 (63%), Positives = 581/766 (75%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGD---SDATSSGS 57
M SRS +N L+LASG + R +PR+M V GI+S+ D DS D D D +
Sbjct: 1 MVSRSYSNLLELASGDSPTFGRMNRQIPRIMAVAGIMSNIDN-DSKDTDLSPKDRIIIVA 59
Query: 58 RERKIIVANMLPLHAKRDTETGR-----WCFSXXXXXXXXXXXXGFSSDT-EVIYVGSLK 111
E I + + + + W FS G + EVIYVG LK
Sbjct: 60 NELPIRAQRRVDGNGSGSSSSSTCCSKGWNFSWDENSLLLQLKDGLGDEAIEVIYVGCLK 119
Query: 112 ADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDR 171
+I +EQEEV Q LL+ F CVPTFLP DL ++Y GFCKQ LWPLFHYMLP+ PD G R
Sbjct: 120 EEIPLNEQEEVYQILLESFKCVPTFLPLDLYTRYYHGFCKQQLWPLFHYMLPLSPDLGGR 179
Query: 172 FDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHS 231
FDR LWQAYVS NKIFAD++MEVINP+DD VW+HDYHLMVLPTFLRKRFNR+KLGFFLHS
Sbjct: 180 FDRTLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHS 239
Query: 232 PFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD 291
PFPSSEIY+TLP+R+E+LR LLN DLIGFHTFDYARHFLSCCSRMLGL YESKRG+IGL+
Sbjct: 240 PFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGLE 299
Query: 292 YFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFD--GKKLILGIDDMDIFKGI 349
Y+GRTV IKILPVG+HMG+L+SVL+LP T K+ E+ +++ G+ ++LG+DDMDIFKGI
Sbjct: 300 YYGRTVSIKILPVGIHMGQLQSVLSLPETERKVGELIERYGRKGRTMLLGVDDMDIFKGI 359
Query: 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409
+LKLLAMEQLL QHP +GKVVLVQI NPARG GKDV+E + ETY T KRINE +G P Y
Sbjct: 360 TLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEMQAETYSTVKRINETFGRPGY 419
Query: 410 EPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERD 469
+P+VLID P+ +E+ AYY VAECC+V AVRDGMNL+PY+YIV RQG +D+ L E +
Sbjct: 420 DPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIVSRQGNEKLDKILKLEAN 479
Query: 470 SPHT-SMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV 528
+ + SMLVVSEFIGCSPSLSGAIRVNPW++DAVADAM A+ + + EKQLRHEKHY+YV
Sbjct: 480 NRNKKSMLVVSEFIGCSPSLSGAIRVNPWNVDAVADAMDSALEVAEPEKQLRHEKHYKYV 539
Query: 529 STHDVAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRK 588
STHDV YWARSF QDLER+C +H +RCWGIG GL FRV++L SFR+LS++HIVSAY++
Sbjct: 540 STHDVGYWARSFLQDLERSCGEHGRRRCWGIGFGLSFRVVALDQSFRKLSMEHIVSAYKR 599
Query: 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648
T+ RAI LDYD T++P+ SI K P + I +L TLC D N VFIVS + R +LS+W +P
Sbjct: 600 TKTRAILLDYDDTLMPQGSIDKRPSSKSIDILNTLCRDKGNLVFIVSAKSRETLSDWFSP 659
Query: 649 CEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESAL 708
CE LGIAAEHGYF+R K EWE D WK+I EPVM YTE TDGS IE KE+AL
Sbjct: 660 CEKLGIAAEHGYFLRLRKAVEWENCVAAVDCSWKQIAEPVMELYTETTDGSTIEDKETAL 719
Query: 709 VWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQ 754
VW ++DADPDFGSCQAKELLDHLESVLANEP VKRGQ+ VEVKPQ
Sbjct: 720 VWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQ 765
|
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| TAIR|locus:2054027 TPS11 "trehalose phosphatase/synthase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2485 (879.8 bits), Expect = 3.4e-258, P = 3.4e-258
Identities = 454/723 (62%), Positives = 560/723 (77%)
Query: 33 VPGIISDADGYDSNDGDSDATSSGSRERKIIVANMLPLHAKRDTETGRWCFSXXXXXXXX 92
+P ++ G +++D + A + + ++I+V+N LPL A RD + +WCF
Sbjct: 26 IPNAVTKLSGLETDDPNGGAWVT--KPKRIVVSNQLPLRAHRDISSNKWCFEFDNDSLYL 83
Query: 93 XXXXGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQ 152
GF +TEV+YVGSL AD+ SEQE+V+Q LL+ F CVPTFLP DL K+Y GFCK
Sbjct: 84 QLKDGFPPETEVVYVGSLNADVLPSEQEDVSQFLLEKFQCVPTFLPSDLLNKYYHGFCKH 143
Query: 153 HLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVL 212
+LWP+FHY+LPM G FDR W+AY + NKIFADK+ EV+NPDDD VW+HDYHLM+L
Sbjct: 144 YLWPIFHYLLPMTQAQGSLFDRSNWRAYTTVNKIFADKIFEVLNPDDDYVWIHDYHLMIL 203
Query: 213 PTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272
PTFLR RF+RIKLG FLHSPFPSSEIYRTLPVRDEIL+G LNCDL+GFHTFDYARHFLSC
Sbjct: 204 PTFLRNRFHRIKLGIFLHSPFPSSEIYRTLPVRDEILKGFLNCDLVGFHTFDYARHFLSC 263
Query: 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFD 332
CSRMLGLDYESKRG+IGL+YFGRTV IKILPVG+HMG++ES+ TA K+K + ++F
Sbjct: 264 CSRMLGLDYESKRGYIGLEYFGRTVSIKILPVGIHMGQIESIKASEKTAEKVKRLRERFK 323
Query: 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKE 392
G ++LG+DD+D+FKGISLK AM QLL+Q+ +RGKVVLVQI NPAR SGKDVQ+ +K+
Sbjct: 324 GNIVMLGVDDLDMFKGISLKFWAMGQLLEQNEELRGKVVLVQITNPARSSGKDVQDVEKQ 383
Query: 393 TYLTAKRINEVYGSPN-YEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYI 451
L A IN +G P Y+P+V I+ PV +K AYYA++EC +VNAVRDGMNLVPYKY
Sbjct: 384 INLIADEINSKFGRPGGYKPIVFINGPVSTLDKVAYYAISECVVVNAVRDGMNLVPYKYT 443
Query: 452 VCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAIN 511
V RQG+P +D ALG D S+++VSEFIGCSPSLSGAIRVNPW+IDAV +AM+ A+
Sbjct: 444 VTRQGSPALDAALGFGEDDVRKSVIIVSEFIGCSPSLSGAIRVNPWNIDAVTNAMSSAMT 503
Query: 512 MRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLS 571
M D EK LRH+KH++Y+S+H+VAYWARS+ QDL+RAC+DHY+KR WG+G GL F+V++L
Sbjct: 504 MSDKEKNLRHQKHHKYISSHNVAYWARSYDQDLQRACKDHYNKRFWGVGFGLFFKVVALD 563
Query: 572 PSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTV 631
P+FRRL + IV AYR++ R I LDYDGT++ + ++ K P ++IS+L LC DP+N V
Sbjct: 564 PNFRRLCGETIVPAYRRSSSRLILLDYDGTMMDQDTLDKRPSDDLISLLNRLCDDPSNLV 623
Query: 632 FIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRS 691
FIVSGRG+ LS+W C LGI+AEHGYF RWN S WET+ L ADL WKKI +PVM
Sbjct: 624 FIVSGRGKDPLSKWFDSCPNLGISAEHGYFTRWNSNSPWETSELPADLSWKKIAKPVMNH 683
Query: 692 YTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEV 751
Y EATDGS IE KESA+VWHHQ+AD FGS QAKELLDHLESVL NEP VVKRGQHIVEV
Sbjct: 684 YMEATDGSFIEEKESAMVWHHQEADHSFGSWQAKELLDHLESVLTNEPVVVKRGQHIVEV 743
Query: 752 KPQ 754
KPQ
Sbjct: 744 KPQ 746
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| ASPGD|ASPL0000037859 orlA [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 554 (200.1 bits), Expect = 2.0e-95, Sum P(2) = 2.0e-95
Identities = 124/350 (35%), Positives = 195/350 (55%)
Query: 110 LKADIDASEQEEVAQKLLDDFNCVP--TFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPD 167
L+ + +S +V L D + VP T + D + + + ++ L+ L HY P
Sbjct: 208 LEDQLSSSRHGKVVPVWLSDESDVPEDTIILGDQSR--WRRYAEKELYALLHYK-QNGPT 264
Query: 168 HGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGF 227
G RF+R W YV N++FA+++++ + D VW+HDYHL +LP+ LR+ I +GF
Sbjct: 265 DG-RFERDSWTDYVRMNQLFAERILQEYK-EGDIVWIHDYHLFLLPSILRQHVPNIYIGF 322
Query: 228 FLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGH 287
+LHSPFPSSE R L R EIL G+L ++IGF TF Y+RHF SCC+R+LG + +S
Sbjct: 323 YLHSPFPSSEYMRCLAKRKEILTGVLGANMIGFQTFSYSRHFSSCCTRVLGFESDSA--- 379
Query: 288 IGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKE-IEKQFDGKKLILGIDDMDIF 346
G+D +G V + + P+G+ ++ + A K E + + + GKK+I+G D +D
Sbjct: 380 -GVDAYGAHVAVDVFPIGIDAEAIQKIAFENADTEKAVEGLRQLYAGKKIIVGRDRLDSA 438
Query: 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPAR-GSGKDVQEAKKETYLTAKRINEVYG 405
+G++ KL A E L++ P R KVVL+Q+ +P K+ Q+ IN +G
Sbjct: 439 RGVAQKLQAFETFLERFPEWRDKVVLIQVTSPTSVEEEKEEQKIASRISNLVSTINGRFG 498
Query: 406 SPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQ 455
S ++ PV + + E A VA+ ++ VRDGMN +YI+C+Q
Sbjct: 499 SLSFSPVKYYPQYLSPHEYFALLRVADVGLITTVRDGMNTTSLEYILCQQ 548
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| DICTYBASE|DDB_G0287657 tpsA "alpha,alpha-trehalose-phosphate synthase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 934 (333.8 bits), Expect = 7.8e-94, P = 7.8e-94
Identities = 189/503 (37%), Positives = 304/503 (60%)
Query: 46 NDGDSDATS-SGSRERKIIVANMLPLHAKRDTETGRWCFSXXXXXXXXXXXXGFSSDTEV 104
N+ D++ + +G R I+V+N LP+ K+++ G+W G S+
Sbjct: 2 NENDNNLENETGFSGRLIVVSNRLPVSIKKESN-GKWSCKMSSGGLVAALS-GLKSN--F 57
Query: 105 IYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPM 164
I+VG + A+I+ +++E+ + L D++C+P FL + + Y GF LWPLFHY LP
Sbjct: 58 IWVGWIGAEIEEDDRKEIKELLWKDYSCIPVFLSEKVANEHYNGFSNGVLWPLFHY-LPG 116
Query: 165 CPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIK 224
D+ DR +W +YV AN+ F+ V E++ P+D VWVHDYH+M+LP L+++ +
Sbjct: 117 DLDYDDR----IWNSYVEANEQFSSVVAEILKPND-LVWVHDYHMMLLPEILKQKKPDAR 171
Query: 225 LGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESK 284
+GFFLH PFPSSEI+R LP R EIL G+LNC LIGFHT+DYARHFL C+R++GL+
Sbjct: 172 IGFFLHIPFPSSEIFRVLPCRKEILLGILNCCLIGFHTYDYARHFLKSCTRIVGLETAPN 231
Query: 285 RGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMD 344
G+ + R V + + PVG+ + L +IKE+++ F+G K+++GID +D
Sbjct: 232 ----GVYFKDRFVQVGVFPVGIDPDKFFESLKTTQVQNRIKELKESFEGTKVLIGIDRLD 287
Query: 345 IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVY 404
KGI KL A+E+L Q++P +GK+VL+Q+ P+R ++ Q+ KKE RIN +Y
Sbjct: 288 YIKGIPQKLQAIERLFQKYPEWKGKLVLIQVAVPSRQDVEEYQKLKKEVEELVGRINGLY 347
Query: 405 GSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEAL 464
GS Y P+ + + V E +A Y +++ ++ ++RDGMNLV +YIVC+
Sbjct: 348 GSIGYSPIHYLFQSVDPSELTALYNISDAALITSIRDGMNLVAQEYIVCQ---------- 397
Query: 465 GRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKH 524
+ + +L++SEF G + SLSGA+ +NPW+ + VAD++ ++ M E++ +H+
Sbjct: 398 -----TENNGVLILSEFTGAAQSLSGAVMINPWNTEEVADSIHNSLLMPPEEREEKHQML 452
Query: 525 YRYVSTHDVAYWARSFAQDLERA 547
+YV+ H ++W F ++L +A
Sbjct: 453 LKYVTKHTASHWGLGFVKELNKA 475
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| TAIR|locus:2137712 TPS4 "trehalose-6-phosphatase synthase S4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
Identities = 223/668 (33%), Positives = 362/668 (54%)
Query: 103 EVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYML 162
E ++G D+ + ++ L + C+P FL ++ ++Y G+C LWP+FHY L
Sbjct: 45 ETKWIGWPGVDVHDAIGKKTLSITLAEKGCIPVFL-EEVCDQYYNGYCNNILWPIFHY-L 102
Query: 163 PMCPDHGDRFDRVL-WQAYVSANKIFADKVMEVINP---DDDCVWVHDYHLMVLPTFLRK 218
P++ R D + +Q+ A K +V+ + D VW HDYH+M+LP +L++
Sbjct: 103 GTPPEY--RNDATITYQSQYEAYKKANQIFFDVVKEHYEEGDVVWCHDYHVMLLPQYLKE 160
Query: 219 RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLG 278
+++K+G+FLH+PFPSSE+Y+TLP R ++LR +L DL+GFHT+D+ARHFL+ C +LG
Sbjct: 161 YNSKMKVGWFLHTPFPSSEMYKTLPSRSDLLRSVLTADLVGFHTYDFARHFLNACMCILG 220
Query: 279 LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLIL 338
++ S+ G+ G+ + + P+G+ R + L +K+ + F G+KLIL
Sbjct: 221 VEATSE----GIVDQGKVTRVAVFPIGIEPERFINTSELSEVVQYMKKFKNDFGGRKLIL 276
Query: 339 GIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAK 398
G+D +D KGI K A E+ L+++ RGKV+L+QI P R + Q+ K + +
Sbjct: 277 GVDRLDTIKGIPQKYQAFEKFLEENAEWRGKVMLLQIAVPTRNGIGEYQKIKDQCHYHVG 336
Query: 399 RINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458
RIN +GS + P++ +D + + A YA+ + +V ++RDGMNLV ++I C++
Sbjct: 337 RINGRFGSISSVPIIHLDCSIDFNQLCALYAITDVLLVTSLRDGMNLVSSEFIACQKA-- 394
Query: 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEK 517
E+ +L++SEF G SL +GAI VNPW+I V+ A+ A+NM EK
Sbjct: 395 --------EK-----GVLILSEFAGAGQSLGAGAILVNPWNIKEVSSAIGEALNMSHEEK 441
Query: 518 QLRHEKHYRYVSTHDVAYWARSFAQ-DLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRR 576
+ +H+ +++YV TH WA F + L + LG G P
Sbjct: 442 ERKHKINFQYVKTHSTQQWADDFMKLTLTNILCSKLIEITTSAELGAGLAATLELP---- 497
Query: 577 LSIDH-IVSAYRKTERRAIFLDYDGTVVPETSIIKSPG--------PEVISVLKTLCSDP 627
+H ++ Y K+ R + L + GT+ + G P++ LK LCSDP
Sbjct: 498 ---EHDVIQQYSKSNNRLLILGFYGTLTQPMKNQERRGDGMNLELHPQLKERLKELCSDP 554
Query: 628 NNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETN---HLGADLEWKKI 684
TV ++S + L + M +AAE+G F+R + + EW T H+ +LEW
Sbjct: 555 KTTVVVLSRSEKCILDKNFGEYNMW-LAAENGMFLR-HTSGEWVTRIPEHM--NLEWIDG 610
Query: 685 VEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHL-ESVLANEPAVVK 743
V+ V + +TE T GS +E E++LVW++++AD +FG QA+++L HL ++N V
Sbjct: 611 VKHVFKYFTERTPGSYLETSEASLVWNYENADAEFGRAQARDMLQHLWAGPISNASVDVV 670
Query: 744 RGQHIVEV 751
RG VEV
Sbjct: 671 RGGQSVEV 678
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O80738 | TPS10_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.7864 | 0.9666 | 0.8757 | no | no |
| Q54K57 | TPSA_DICDI | 2, ., 4, ., 1, ., 1, 5 | 0.3601 | 0.8397 | 0.8935 | yes | no |
| Q9LRA7 | TPS9_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.8037 | 0.9666 | 0.8696 | yes | no |
| Q0WUI9 | TPS8_ARATH | 2, ., 4, ., 1, ., 1, 5 | 0.7891 | 0.9602 | 0.875 | no | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.963 |
| 4th Layer | 2.4.1.15 | 0.946 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00028851001 | SubName- Full=Chromosome chr1 scaffold_46, whole genome shotgun sequence; (857 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | GSVIVG00004042001 | SubName- Full=Chromosome undetermined scaffold_588, whole genome shotgun sequence; Flags- Fragm [...] (204 aa) | • | 0.462 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 780 | |||
| PLN02205 | 854 | PLN02205, PLN02205, alpha,alpha-trehalose-phosphat | 0.0 | |
| pfam00982 | 470 | pfam00982, Glyco_transf_20, Glycosyltransferase fa | 0.0 | |
| cd03788 | 460 | cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase ( | 0.0 | |
| PRK14501 | 726 | PRK14501, PRK14501, putative bifunctional trehalos | 0.0 | |
| PLN03063 | 797 | PLN03063, PLN03063, alpha,alpha-trehalose-phosphat | 1e-158 | |
| PLN03064 | 934 | PLN03064, PLN03064, alpha,alpha-trehalose-phosphat | 1e-148 | |
| TIGR02400 | 456 | TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-p | 1e-141 | |
| COG0380 | 486 | COG0380, OtsA, Trehalose-6-phosphate synthase [Car | 1e-141 | |
| TIGR02398 | 487 | TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosph | 8e-66 | |
| pfam02358 | 235 | pfam02358, Trehalose_PPase, Trehalose-phosphatase | 3e-62 | |
| PRK10117 | 474 | PRK10117, PRK10117, trehalose-6-phosphate synthase | 3e-61 | |
| COG1877 | 266 | COG1877, OtsB, Trehalose-6-phosphatase [Carbohydra | 8e-34 | |
| TIGR00685 | 244 | TIGR00685, T6PP, trehalose-phosphatase | 2e-14 | |
| TIGR01484 | 204 | TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, | 7e-10 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 3e-07 |
| >gnl|CDD|177855 PLN02205, PLN02205, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 1147 bits (2969), Expect = 0.0
Identities = 518/759 (68%), Positives = 609/759 (80%), Gaps = 5/759 (0%)
Query: 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDATSSGS-RE 59
M SRS +N L+LASG + R +PR+MTV GI+SD D S SD +SS ++
Sbjct: 1 MVSRSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKD 60
Query: 60 RKIIVANMLPLHAKRDTE-TGRWCFSLDEDLLLLHLKDGFSSDT-EVIYVGSLKADIDAS 117
R IIVAN LP+ A+R ++ + W FS DE+ LLL LKDG D EVIYVG LK +I +
Sbjct: 61 RIIIVANQLPIRAQRKSDGSKGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLN 120
Query: 118 EQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLW 177
EQEEV+Q LL+ F CVPTFLP DL ++Y GFCKQ LWPLFHYMLP+ PD G RF+R LW
Sbjct: 121 EQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLW 180
Query: 178 QAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE 237
QAYVS NKIFAD++MEVINP+DD VW+HDYHLMVLPTFLRKRFNR+KLGFFLHSPFPSSE
Sbjct: 181 QAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240
Query: 238 IYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV 297
IY+TLP+R+E+LR LLN DLIGFHTFDYARHFLSCCSRMLGL YESKRG+IGL+Y+GRTV
Sbjct: 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTV 300
Query: 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMDIFKGISLKLLA 355
IKILPVG+HMG+L+SVL+LP T K+KE+ KQF + ++LG+DDMDIFKGISLKLLA
Sbjct: 301 SIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLA 360
Query: 356 MEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLI 415
MEQLL QHP +GKVVLVQI NPARG GKDV+E + ET+ T KRINE +G P Y+P+VLI
Sbjct: 361 MEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLI 420
Query: 416 DRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSM 475
D P+ +E+ AYY VAECC+V AVRDGMNL+PY+YI+ RQG +D+ LG E +P SM
Sbjct: 421 DAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480
Query: 476 LVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAY 535
LVVSEFIGCSPSLSGAIRVNPW+IDAVADAM A+ M + EKQLRHEKHYRYVSTHDV Y
Sbjct: 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGY 540
Query: 536 WARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIF 595
WARSF QDLER CRDH +RCWGIG GL FRV++L P+FR+LS++HIVSAY++T RAI
Sbjct: 541 WARSFLQDLERTCRDHSRRRCWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAIL 600
Query: 596 LDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIA 655
LDYDGT++P+ SI KSP + I +L TLC D NN VFIVS R R +L++W +PCE LGIA
Sbjct: 601 LDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIA 660
Query: 656 AEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDA 715
AEHGYF+R + EWET AD WK+I EPVM+ YTE TDGS IE KE+ALVW ++DA
Sbjct: 661 AEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDA 720
Query: 716 DPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQ 754
DPDFGSCQAKELLDHLESVLANEP VK GQ+IVEVKPQ
Sbjct: 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQ 759
|
Length = 854 |
| >gnl|CDD|216227 pfam00982, Glyco_transf_20, Glycosyltransferase family 20 | Back alignment and domain information |
|---|
Score = 685 bits (1770), Expect = 0.0
Identities = 236/492 (47%), Positives = 317/492 (64%), Gaps = 26/492 (5%)
Query: 59 ERKIIVANMLPLHAKRDTETGRWCFSLDED-LLLLHLKDGFSSDTEVIYVGSLKADIDAS 117
R ++V+N LP+ AKR E G+W FS+ L+ +G S TE ++VG +D
Sbjct: 1 SRLVVVSNRLPVTAKR-EEEGKWEFSIKMSSGGLVSALNGLSEATEGVWVGWPGVPVDED 59
Query: 118 E-QEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVL 176
E ++ V+Q L + F CVP FL + ++Y GF LWPLFHY LP + D FDR
Sbjct: 60 EPKDRVSQLLKEKFTCVPVFLDDEDVDEYYNGFSNSILWPLFHYRLPPN--NEDEFDRSW 117
Query: 177 WQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS 236
W AYV NK+FADK++EV D +WVHDYHLM+LP LRKR K+GFFLH PFPSS
Sbjct: 118 WDAYVKVNKLFADKIVEVYKDGD-LIWVHDYHLMLLPQMLRKRLPDAKIGFFLHIPFPSS 176
Query: 237 EIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRT 296
EI+R LPVR+EILRGLL DLIGFHT+DYARHFLSCCSR+LGL+ S G++Y GRT
Sbjct: 177 EIFRCLPVREEILRGLLGADLIGFHTYDYARHFLSCCSRLLGLETTSDG---GVEYGGRT 233
Query: 297 VYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDIFKGISLKLLA 355
V + P+G+ GR+ES L P+ K+KE++++F + KKLILG+D +D KGI KLLA
Sbjct: 234 VSVGAFPIGIDPGRIESGLKSPSVQEKVKELKERFGNKKKLILGVDRLDYIKGIPQKLLA 293
Query: 356 MEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLI 415
E+ L+++P RGKVVLVQI P+RG ++ Q + + RIN +G+ +Y PV +
Sbjct: 294 FERFLEEYPEWRGKVVLVQIAVPSRGDVEEYQNLRSQVEELVGRINGEFGTLDYTPVHHL 353
Query: 416 DRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSM 475
R + E A YA+A+ C+V ++RDGMNLV Y+Y+ C+Q +
Sbjct: 354 HRSLDFDELIALYAIADVCLVTSLRDGMNLVAYEYVACQQDRK---------------GV 398
Query: 476 LVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVA 534
L++SEF G + SL GAI VNPWDI+ VA+A+ A+ M + E+Q RH K ++Y+S HDV
Sbjct: 399 LILSEFAGAAQSLNDGAILVNPWDIEEVAEAINEALTMSEEERQKRHRKLFKYISKHDVQ 458
Query: 535 YWARSFAQDLER 546
YWA SF DL+R
Sbjct: 459 YWAESFLSDLKR 470
|
Members of this family belong to glycosyl transferase family 20. OtsA (Trehalose-6-phosphate synthase) is homologous to regions in the subunits of yeast trehalose-6-phosphate synthase/phosphate complex. Length = 470 |
| >gnl|CDD|99963 cd03788, GT1_TPS, Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Score = 581 bits (1501), Expect = 0.0
Identities = 202/484 (41%), Positives = 284/484 (58%), Gaps = 26/484 (5%)
Query: 62 IIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEE 121
++V+N LP+ +RD + + L G T ++VG + D E++E
Sbjct: 3 VVVSNRLPVSIERDGDG--EFEARRSAGGLATALKGLLKRTGGLWVGWSGIEEDEEEEDE 60
Query: 122 VAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYV 181
V+ +LL ++ P FL + + +Y GF + LWPLFHY L + RFDR W+AYV
Sbjct: 61 VSTELLGEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLA-----RFDREDWEAYV 115
Query: 182 SANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRT 241
N+ FAD + EV+ P D VWVHDYHL++LP LR+R ++GFFLH PFPSSEI+R
Sbjct: 116 RVNRKFADAIAEVLRPGD-LVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSSEIFRC 174
Query: 242 LPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKI 301
LP R+E+LRGLL DLIGF T YAR+FLSCCSR+LGL+ G++Y GR V +
Sbjct: 175 LPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTD---DGGVEYGGRRVRVGA 231
Query: 302 LPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQ 361
P+G+ + P + E+ ++ G+KLI+G+D +D KGI +LLA E+LL+
Sbjct: 232 FPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLE 291
Query: 362 QHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPR 421
++P RGKVVLVQI P+R + QE ++E RIN +G+ ++ PV + R +PR
Sbjct: 292 RYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPR 351
Query: 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF 481
E +A Y A+ +V +RDGMNLV +Y+ C+ P +L++SEF
Sbjct: 352 EELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDP---------------GVLILSEF 396
Query: 482 IGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFA 541
G + LSGA+ VNP+DID VADA+ A+ M E++ RH K YV THDV WA SF
Sbjct: 397 AGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFL 456
Query: 542 QDLE 545
DL
Sbjct: 457 DDLA 460
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. Length = 460 |
| >gnl|CDD|184712 PRK14501, PRK14501, putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Score = 547 bits (1413), Expect = 0.0
Identities = 245/699 (35%), Positives = 361/699 (51%), Gaps = 50/699 (7%)
Query: 60 RKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVG--SLKADIDAS 117
R IIV+N LP+ R E G + L L+ F ++VG L + ++
Sbjct: 2 RLIIVSNRLPVTVVR--EDGGVELTPSVGGLATGLR-SFHERGGGLWVGWPGLDLEEESE 58
Query: 118 EQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLW 177
EQ + L++ VP FL + ++Y GFC LWPLFHY F+ W
Sbjct: 59 EQRARIEPRLEELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTE-----FEDRFW 113
Query: 178 QAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE 237
++Y N+ FA+ + + P D VWVHDY LM+LP LR+R ++GFFLH PFPS E
Sbjct: 114 ESYERVNQRFAEAIAAIARPGD-VVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPSFE 172
Query: 238 IYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV 297
++R LP R+EIL GLL DLIGFHT+DY RHFLS R+LG + E +G GR V
Sbjct: 173 VFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLG----GRIV 228
Query: 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAME 357
+ P+G+ + + P +I+ + + G+K+IL ID +D KGI +LLA E
Sbjct: 229 RVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFE 288
Query: 358 QLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDR 417
+ L+++P RGKV LVQ+ P+R QE K+E RIN +G+ ++ P+ R
Sbjct: 289 RFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYR 348
Query: 418 PVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLV 477
+P E A Y A+ +V +RDGMNLV +Y+ R +L+
Sbjct: 349 SLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTD---------------GDGVLI 393
Query: 478 VSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWA 537
+SE G + L+ A+ VNP DI+ +A A+ A+ M + E++ R + + +DV WA
Sbjct: 394 LSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWA 453
Query: 538 RSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLD 597
F +L A + + S + + I++ YR RR + LD
Sbjct: 454 SDFLDELREAAEKNKAFA---------------SKPITPAAAEEIIARYRAASRRLLLLD 498
Query: 598 YDGTVVP--ETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIA 655
YDGT+VP + P E+ +L+ L +DPN V I+SGR R +L W + +
Sbjct: 499 YDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPI-HLV 557
Query: 656 AEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDA 715
AEHG + R EW+ EWK V P++ + + T GS IE KE++L WH+++A
Sbjct: 558 AEHGAWSRAPGG-EWQLLE-PVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNA 615
Query: 716 DPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQ 754
DP+ G +A EL+ L S+L+N P V RG +VEV+P
Sbjct: 616 DPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPA 654
|
Length = 726 |
| >gnl|CDD|215555 PLN03063, PLN03063, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 478 bits (1232), Expect = e-158
Identities = 254/710 (35%), Positives = 388/710 (54%), Gaps = 55/710 (7%)
Query: 56 GSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADID 115
G R R ++VAN LP+ AKR T W + L+ L +T+ ++G D+
Sbjct: 8 GERPRLLVVANRLPVSAKR-TGEDSWSLEMSPGGLVSALLGVKEFETK--WIGWPGVDVH 64
Query: 116 ASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYM-LPMCPDH-GDRFD 173
+ + L + C+P FL +++ ++Y G+C LWP+FHYM LP H R
Sbjct: 65 DEIGKAALTESLAEKGCIPVFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTF 123
Query: 174 RVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPF 233
+ AY AN++F D V E + D VW HDYHLM LP +L++ N++K+G+FLH+PF
Sbjct: 124 ESQYDAYKKANRMFLDVVKENYE-EGDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPF 182
Query: 234 PSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYF 293
PSSEIY+TLP R E+LR +L DLIGFHT+D+ARHFLS C+R+LG++ H G+
Sbjct: 183 PSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGT----HEGVVDQ 238
Query: 294 GRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKL 353
G+ + + P+G+ R + LP +KE+++ F G+K+ILG+D +D+ KGI K
Sbjct: 239 GKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKY 298
Query: 354 LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVV 413
LA E+ L+++P R KV+LVQI P R + Q+ K + + RIN +GS + P+
Sbjct: 299 LAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIH 358
Query: 414 LIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHT 473
+D V A YA+ + +V ++RDGMNLV Y+++ C++
Sbjct: 359 HLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAK---------------K 403
Query: 474 SMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHD 532
+LV+SEF G SL +GA+ VNPW+I V+ A+ A+NM D E++ RH +++YV TH
Sbjct: 404 GVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHS 463
Query: 533 VAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERR 592
WA F +L I + R ++ L ++ Y K+ R
Sbjct: 464 AQKWADDFMSELN------------DIIVEAELRTRNIPLE---LPEQDVIQQYSKSNNR 508
Query: 593 AIFLDYDGTVV-PETSIIKSP----GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647
+ L + GT+ P S IK PE+ LK LCSDP TV ++S G+ L +
Sbjct: 509 LLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFG 568
Query: 648 PCEMLGIAAEHGYFIRWNKTSEWETN---HLGADLEWKKIVEPVMRSYTEATDGSNIEIK 704
+ +AAE+G F+R + + EW T H+ +L+W V+ V + +T+ T S +E
Sbjct: 569 EYNIW-LAAENGMFLR-HTSGEWVTTMPEHM--NLDWVDGVKNVFKYFTDRTPRSYVEKS 624
Query: 705 ESALVWHHQDADPDFGSCQAKELLDHL-ESVLANEPAVVKRGQHIVEVKP 753
E++LVW+++ AD +FG QA+++L HL ++N V RGQ VEV
Sbjct: 625 ETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHA 674
|
Length = 797 |
| >gnl|CDD|215556 PLN03064, PLN03064, alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Score = 457 bits (1178), Expect = e-148
Identities = 264/751 (35%), Positives = 404/751 (53%), Gaps = 105/751 (13%)
Query: 41 DGYDSNDGDSDATSSGSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLL---LLHLKDG 97
DG + +G R+R ++VAN LP+ A R E W + L LL +K+
Sbjct: 81 DGCERQEGRRPL-----RQRLLVVANRLPVSAVRRGE-DSWSLEISAGGLVSALLGVKE- 133
Query: 98 FSSDTEVIYVGSLKADIDASEQEEVAQ----KLLDDFNCVPTFLPHDLQKKFYLGFCKQH 153
E ++G ++ +EV Q K L + C+P FL ++ ++Y G+C
Sbjct: 134 ----FEARWIGWAGVNV----PDEVGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNI 185
Query: 154 LWPLFHYM-LPMCPDHGDRF--DRVL---WQAYVSANKIFADKVMEVINPDDDCVWVHDY 207
LWPLFHY+ LP DR R + AY AN++FAD V E + D VW HDY
Sbjct: 186 LWPLFHYLGLP----QEDRLATTRSFQSQFAAYKKANQMFADVVNEHYE-EGDVVWCHDY 240
Query: 208 HLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYAR 267
HLM LP L++ + +K+G+FLH+PFPSSEI+RTLP R E+LR +L DL+GFHT+DYAR
Sbjct: 241 HLMFLPKCLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYAR 300
Query: 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEI 327
HF+S C+R+LGL+ + G++ GR + P+G+ R L P IKE+
Sbjct: 301 HFVSACTRILGLEGTPE----GVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKEL 356
Query: 328 EKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQ 387
+++F G+K++LG+D +D+ KGI K+LA E+ L+++P R KVVL+QI P R DV
Sbjct: 357 KERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTR---TDVP 413
Query: 388 EAKKETYLTAK------RINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRD 441
E +K LT++ RIN +G+ P+ +DR + A YAV + +V ++RD
Sbjct: 414 EYQK---LTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRD 470
Query: 442 GMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDID 500
GMNLV Y+++ C+ +L++SEF G + SL +GAI VNPW+I
Sbjct: 471 GMNLVSYEFVACQ---------------DSKKGVLILSEFAGAAQSLGAGAILVNPWNIT 515
Query: 501 AVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDHYSKRCWGIG 560
VA ++ A+NM + E++ RH ++ +V+TH WA +F +L
Sbjct: 516 EVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTV------------ 563
Query: 561 LGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPG------- 613
+ R + P +L + + Y ++ R + L ++ T+ T + +PG
Sbjct: 564 VEAQLRTRQVPP---QLPPEDAIQRYLQSNNRLLILGFNATL---TEPVDTPGRRGDQIK 617
Query: 614 -------PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNK 666
PE+ L+ LCSDP T+ ++SG RS L E +M +AAE+G F+R K
Sbjct: 618 EMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDMW-LAAENGMFLRHTK 676
Query: 667 TSEWETN---HLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQ 723
EW T HL +++W V+ V +TE T S+ E +E++LVW+++ AD +FG Q
Sbjct: 677 -GEWMTTMPEHL--NMDWVDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQ 733
Query: 724 AKELLDHLESVLANEPAV-VKRGQHIVEVKP 753
A+++L HL + + AV V +G VEV+P
Sbjct: 734 ARDMLQHLWTGPISNAAVDVVQGSRSVEVRP 764
|
Length = 934 |
| >gnl|CDD|233848 TIGR02400, trehalose_OtsA, alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Score = 422 bits (1088), Expect = e-141
Identities = 182/492 (36%), Positives = 264/492 (53%), Gaps = 41/492 (8%)
Query: 60 RKIIVANMLPLHAKRDTET----GRWCFSLDEDLLLLHLKDGFSSDTEVIYVG-SLKADI 114
R I+V+N LP+ R G L + L G T ++ G S K
Sbjct: 1 RLIVVSNRLPVPITRGGLEPSAGG----------LAVALL-GALKATGGVWFGWSGKTVE 49
Query: 115 DASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDR 174
+ + + +L P FL + +Y GF LWPLFHY + R+DR
Sbjct: 50 EDEGEPFLRTELEGKITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDR 104
Query: 175 VLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFP 234
W+AY N++FA+ + ++ P D VWVHDYHLM+LP LR+ + K+GFFLH PFP
Sbjct: 105 KAWEAYRRVNRLFAEALAPLLQPGD-IVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFP 163
Query: 235 SSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFG 294
SSEIYRTLP R E+L GLL DL+GF T+D AR+FLS SR LGL+ G++ G
Sbjct: 164 SSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGG 219
Query: 295 RTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLL 354
RTV + P+G+ + R P+ +I E+ + G+KLI+G+D +D KG+ +LL
Sbjct: 220 RTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLL 279
Query: 355 AMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVL 414
A E+ L++HP RGKVVLVQI P+RG + Q+ +++ RIN +G+ ++ P+
Sbjct: 280 AFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRY 339
Query: 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTS 474
++R R E A Y A+ +V +RDGMNLV +Y+ + P
Sbjct: 340 LNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQD---------------PKDG 384
Query: 475 MLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVA 534
+L++SEF G + L+GA+ VNP+DID +ADA+ A+ M E++ RH + +DV
Sbjct: 385 VLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQ 444
Query: 535 YWARSFAQDLER 546
W F DL
Sbjct: 445 RWREDFLSDLNS 456
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsible for synthesis of only trace amounts of trehalose while the majority is synthesized by the TreYZ pathway; the significance of OtsA in this species is unclear (see Wolf, et al., PMID:12890033) [Cellular processes, Adaptations to atypical conditions]. Length = 456 |
| >gnl|CDD|223457 COG0380, OtsA, Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 423 bits (1089), Expect = e-141
Identities = 187/505 (37%), Positives = 272/505 (53%), Gaps = 26/505 (5%)
Query: 44 DSNDGDSDATSSGSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTE 103
+ + A+ R I+V+N LP+ + + G L+ LK
Sbjct: 1 STEEQPITASPLEDS-RLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALK-PLLRVDG 58
Query: 104 VIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLP 163
++G E + ++ + +F P L + + +Y GF LWPLFHY +
Sbjct: 59 GTWIGWSGTTGPTDESSDDLKERIGEFTSAPVILSDEDYEGYYNGFSNAILWPLFHYFID 118
Query: 164 MCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRI 223
++R W AYV N+ FADK++E+ P D +WVHDYHL+++P LR+R
Sbjct: 119 D-----VAYERNWWDAYVKVNRKFADKIVEIYEPGD-IIWVHDYHLLLVPQMLRERIPDA 172
Query: 224 KLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYES 283
K+GFFLH PFPSSE++R LP R+EIL GLL DLIGF T YAR+FL CSR+LG+ ++
Sbjct: 173 KIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDA 232
Query: 284 KRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDG-KKLILGIDD 342
G D GR V + P+G+ E L P+ K+ E++ + KKLI+G+D
Sbjct: 233 DIRFNGAD--GRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDR 290
Query: 343 MDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINE 402
+D KGI +LLA E+LL+++P RGKVVL+QI P+R ++ Q + + RIN
Sbjct: 291 LDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRING 350
Query: 403 VYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDE 462
+GS ++ PV + R + R E A Y A+ +V +RDGMNLV +Y+ ++ P
Sbjct: 351 EFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKP---- 406
Query: 463 ALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHE 522
+L++SEF G + L A+ VNPWD VADA+ A+ M E++ RHE
Sbjct: 407 -----------GVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHE 455
Query: 523 KHYRYVSTHDVAYWARSFAQDLERA 547
K + V THDVA WA SF DL +A
Sbjct: 456 KLLKQVLTHDVARWANSFLDDLAQA 480
|
Length = 486 |
| >gnl|CDD|131451 TIGR02398, gluc_glyc_Psyn, glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 8e-66
Identities = 124/415 (29%), Positives = 197/415 (47%), Gaps = 38/415 (9%)
Query: 143 KKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCV 202
FY K+ WP+ H P+ F WQ ++ N+ FA+ + V
Sbjct: 83 DIFYHITSKEAFWPILHTF----PERFQ-FREDDWQVFLKVNRAFAEAACLEAA-EGATV 136
Query: 203 WVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHT 262
WVHDY+L ++P ++R+ +K+ FF H+PFPS++++ LP R++I+ LL CD IGFH
Sbjct: 137 WVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHI 196
Query: 263 FDYARHFLSCCSRMLGLDYESK-----------------RGHIGLDYFGRTVYIKILPVG 305
Y +F+ ++ L S+ R LD R V + PVG
Sbjct: 197 PRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVG 256
Query: 306 VHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPG 365
R+ S L + ++ I + G KLIL + +D KGI KL A E+LL++ P
Sbjct: 257 TDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERRPE 316
Query: 366 MRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425
+ GKV LV PA E + + RIN + + P+ R +P E S
Sbjct: 317 LLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVS 376
Query: 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485
A++A+A+ + +RDG+NLV +Y+ + D +LV+SEF G +
Sbjct: 377 AWFAMADVMWITPLRDGLNLVAKEYVAAQ-----------GLLD----GVLVLSEFAGAA 421
Query: 486 PSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSF 540
L GA+ NP+D + + + +A+ M +E+Q R + + V+ +DV WA F
Sbjct: 422 VELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEF 476
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. Length = 487 |
| >gnl|CDD|216992 pfam02358, Trehalose_PPase, Trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 208 bits (531), Expect = 3e-62
Identities = 79/165 (47%), Positives = 102/165 (61%), Gaps = 4/165 (2%)
Query: 595 FLDYDGTVVP--ETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML 652
FLDYDGT+ P E P ++S+L L SDP NTV I+SGR R+ + L
Sbjct: 1 FLDYDGTLSPIVEDPDAAVPSDRLLSLLNRLASDPPNTVAIISGRSRAFE-DLFFGVPNL 59
Query: 653 GIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHH 712
G+AAEHG FIR +W DL+WKK V ++ YTE T GS IE K+SAL WH+
Sbjct: 60 GLAAEHGAFIRDPGGEDWTNLAEVEDLDWKKEVAAILEEYTERTPGSYIEDKKSALAWHY 119
Query: 713 QDADPDFGSCQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQVL 756
++AD DFG QAKEL +HLESVL + P V V +G+ +VEV+P +
Sbjct: 120 RNADDDFGVFQAKELAEHLESVLKDYPDVRVTQGKKVVEVRPVGV 164
|
This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. Length = 235 |
| >gnl|CDD|182249 PRK10117, PRK10117, trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Score = 213 bits (544), Expect = 3e-61
Identities = 125/410 (30%), Positives = 208/410 (50%), Gaps = 31/410 (7%)
Query: 139 HDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPD 198
+D +Y F LWP FHY L + +F R W+ Y+ N + ADK++ ++ D
Sbjct: 73 YDE---YYNQFSNAVLWPAFHYRLDLV-----QFQRPAWEGYLRVNALLADKLLPLLKDD 124
Query: 199 DDCVWVHDYHLMVLPTFLRKR--FNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCD 256
D +W+HDYHL+ + LRKR NRI GFFLH PFP+ EI+ LP DE+L L + D
Sbjct: 125 D-IIWIHDYHLLPFASELRKRGVNNRI--GFFLHIPFPTPEIFNALPPHDELLEQLCDYD 181
Query: 257 LIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLN 316
L+GF T + FL C S + + S + H +G+ ++ P+G+ +
Sbjct: 182 LLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTA---WGKAFRTEVYPIGIEPDEIAKQAA 238
Query: 317 LPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIV 376
P K+ +++ + + I ++ +D KG+ + LA E LL+++P GK+ QI
Sbjct: 239 GPLPP-KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIA 297
Query: 377 NPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIV 436
+RG + Q+ + + A RIN YG + P+ +++ R + ++ +V
Sbjct: 298 PTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLV 357
Query: 437 NAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNP 496
+RDGMNLV +Y+ +D + +LV+S+F G + L+ A+ VNP
Sbjct: 358 TPLRDGMNLVAKEYVAA--------------QDPANPGVLVLSQFAGAANELTSALIVNP 403
Query: 497 WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546
+D D VA A+ A+ M +E+ RH + + +D+ +W F DL++
Sbjct: 404 YDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQ 453
|
Length = 474 |
| >gnl|CDD|224789 COG1877, OtsB, Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 8e-34
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 6/180 (3%)
Query: 576 RLSIDHIVSAYRKTERRAIFLDYDGTVVP--ETSIIKSPGPEVISVLKTLCSDPNNTVFI 633
L + ++ Y +R +FLDYDGT+ P ++S+L+ L SDP N V I
Sbjct: 3 ALQSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAI 62
Query: 634 VSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYT 693
+SGR + L +G+ AEHG +R W ADL W K V ++ Y
Sbjct: 63 ISGRSLAELERLFGVPG-IGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYV 121
Query: 694 EATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKP 753
E T GS IE K A+ H+++A+ D G+ A L + L V G+ +VE++P
Sbjct: 122 ERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLR---VTPGKMVVELRP 178
|
Length = 266 |
| >gnl|CDD|233092 TIGR00685, T6PP, trehalose-phosphatase | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 2e-14
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 16/170 (9%)
Query: 591 RRAIFLDYDGTVVPETSIIKSP-----GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEW 645
+RA F DYDGT+ I+ P ++++L+ L + P+N ++I+S GR L +W
Sbjct: 3 KRAFFFDYDGTLSE---IVPDPDAAVVSDRLLTILQKLAARPHNAIWIIS--GRKFLEKW 57
Query: 646 -LAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIK 704
LG+A EHG ++ N + + N WK + T G IE K
Sbjct: 58 LGVKLPGLGLAGEHGCEMKDNGSCQDWVNLTEKIPSWKVRANELREEITT-RPGVFIERK 116
Query: 705 ESALVWHHQDA-DPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKP 753
AL WH++ A P+ +AKEL E +L+ V G+ +VE+KP
Sbjct: 117 GVALAWHYRQAPVPELARFRAKEL---KEKILSFTDLEVMDGKAVVELKP 163
|
Trehalose, a neutral disaccharide of two glucose residues, is an important osmolyte for dessication and/or salt tolerance in a number of prokaryotic and eukaryotic species, including E. coli, Saccharomyces cerevisiae, and Arabidopsis thaliana. Many bacteria also utilize trehalose in the synthesis of trehalolipids, specialized cell wall constituents believed to be involved in the uptake of hydrophobic substances. Trehalose dimycolate (TDM, cord factor) and related substances are important constituents of the mycobacterial waxy coat and responsible for various clinically important immunological interactions with host organism. This enzyme, trehalose-phosphatase, removes a phosphate group in the final step of trehalose biosynthesis. The trehalose-phosphatase from Saccharomyces cerevisiae is fused to the synthase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes [Cellular processes, Adaptations to atypical conditions]. Length = 244 |
| >gnl|CDD|233434 TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 7e-10
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 10/166 (6%)
Query: 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML 652
+F D DGT++ + S PE I L+ L V +V+GR + + E L L
Sbjct: 1 LLFFDLDGTLLDPNAHELS--PETIEALERLREA-GVKVVLVTGRSLAEIKELLKQLP-L 56
Query: 653 GIAAEHGYFIRWNKTSEWETNHLGAD--LEWKKIVEPVMRSYTEATDGSNIEIKESALVW 710
+ AE+G I + + + L K+ + ++S +E G+ IE K A+
Sbjct: 57 PLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAI 116
Query: 711 HHQDADPDFGSCQAKELLDHLESVLANEPAVVKR--GQHIVEVKPQ 754
H+ A+ ++ + LE + N+ + G+ +EV P
Sbjct: 117 HYVGAELGQEL--DSKMRERLEKIGRNDLELEAIYVGKTDLEVLPA 160
|
This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class II subfamilies are characterized by a domain that is located between the second and third conserved catalytic motifs of the superfamily domain. The IIB subfamily is distinguished from the IIA subfamily (TIGR01460) by homology and the predicted secondary structure of this domain by PSI-PRED. The IIB subfamily's Class II domain has the following predicted structure: Helix-Sheet-Sheet-(Helix or Sheet)-Helix-Sheet-(variable)-Helix-Sheet-Sheet. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing OMNI|TC0379 and OMNI|SA2196 whose relationship to the other groups is unclear [Unknown function, Enzymes of unknown specificity]. Length = 204 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 53.0 bits (126), Expect = 3e-07
Identities = 61/399 (15%), Positives = 124/399 (31%), Gaps = 61/399 (15%)
Query: 157 LFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFL 216
+ L R V + + +++ ++ +H + L++ P L
Sbjct: 40 IAPEKLEGLGIEVLRLPSVSLPLLIVRLRPALLRLLLLLKRLLPYDIIHAHSLLLAPGGL 99
Query: 217 ----RKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272
+ I L LH P + L + G R +
Sbjct: 100 LALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLL------------GLLRLLLKRLKKAL 147
Query: 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFD 332
+ S L+ G I ++P G+ + +
Sbjct: 148 RLLADRVIAVSPALKELLEALGVPNKIVVIPNGIDTEKFA----------PARIGLLPEG 197
Query: 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKE 392
GK ++L + +D KG+ L + A +L ++ P ++ +V G G + +E
Sbjct: 198 GKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIV---------GDGPERRE---- 244
Query: 393 TYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIV 452
+ ++ E V VP E + A A+ ++ ++ +G LV + +
Sbjct: 245 ------ELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMA 298
Query: 453 CRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINM 512
GTP++ D +V G + V P D++ +ADA+ +
Sbjct: 299 A--GTPVIA------SDVGGIPEVVEDGETG--------LLVPPGDVEELADALEQLLED 342
Query: 513 RDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDH 551
+ ++L R A + E +
Sbjct: 343 PELREELGEAARERVEEEFSWERIAEQLLELYEELLAEK 381
|
Length = 381 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 780 | |||
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 100.0 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 100.0 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 100.0 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 100.0 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 100.0 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 100.0 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 99.97 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 99.96 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.94 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 99.93 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 99.93 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.93 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.93 | |
| PLN03017 | 366 | trehalose-phosphatase | 99.93 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.93 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 99.93 | |
| PLN02316 | 1036 | synthase/transferase | 99.92 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 99.92 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.92 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.91 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.91 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 99.91 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.9 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 99.9 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 99.9 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 99.9 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 99.89 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.89 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.89 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 99.89 | |
| PLN00142 | 815 | sucrose synthase | 99.88 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.88 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 99.88 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.88 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 99.87 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 99.87 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.86 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.85 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 99.85 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 99.85 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.85 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.84 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.84 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.84 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 99.84 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.84 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.84 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 99.84 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.82 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 99.82 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 99.82 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 99.82 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.82 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.82 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.82 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.82 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.82 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.81 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.81 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.81 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.81 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.8 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.79 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.79 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.79 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.78 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 99.78 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.78 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.77 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 99.77 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.77 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.75 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.74 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.74 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.73 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.72 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.72 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.7 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.7 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.69 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.69 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.67 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.66 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.66 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.64 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.64 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.64 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.62 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.62 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.61 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.6 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.6 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.58 | |
| PLN02423 | 245 | phosphomannomutase | 99.57 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.56 | |
| PLN02887 | 580 | hydrolase family protein | 99.56 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.54 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.52 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.51 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.51 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.48 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.48 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.46 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.45 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.41 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.41 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.39 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 99.36 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.25 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.24 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.24 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.22 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.21 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.17 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.17 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.12 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.1 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.1 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.07 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 98.91 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 98.87 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.87 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 98.79 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 98.78 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 98.73 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 98.67 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 98.62 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.56 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.42 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 98.39 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.32 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 98.18 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 98.16 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 98.01 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.95 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.84 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.68 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.43 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 97.05 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 97.03 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 96.98 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.96 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.95 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 96.82 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.81 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 96.69 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.69 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.67 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.32 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.23 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 96.14 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 95.6 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.57 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 95.55 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 95.5 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 95.35 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.32 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 95.19 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 95.19 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.12 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 95.0 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 94.95 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 94.83 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 94.61 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.53 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 94.4 | |
| PRK06769 | 173 | hypothetical protein; Validated | 94.39 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 94.37 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 94.19 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 94.17 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 94.1 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 94.07 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 94.06 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 93.92 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 93.88 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 93.8 | |
| PLN02954 | 224 | phosphoserine phosphatase | 93.75 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 93.68 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 93.57 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 93.52 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 93.44 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 93.35 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 93.25 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 93.1 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 92.86 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.59 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 92.31 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 91.67 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 91.65 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 91.54 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 91.48 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 90.75 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 90.64 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 90.63 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 90.45 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 90.43 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 90.35 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 90.25 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 90.08 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 89.74 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 89.64 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 89.3 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 89.25 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 89.21 | |
| PRK08238 | 479 | hypothetical protein; Validated | 88.84 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 88.73 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 88.57 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 87.49 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 86.87 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 86.68 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 86.65 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 85.56 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 85.43 | |
| PLN02940 | 382 | riboflavin kinase | 84.76 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 84.64 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 84.58 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 83.06 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 82.67 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 82.59 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 82.27 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 81.97 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 81.94 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 81.54 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 81.48 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 81.33 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 80.87 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 80.82 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 80.57 | |
| COG0816 | 141 | Predicted endonuclease involved in recombination ( | 80.42 |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-183 Score=1626.64 Aligned_cols=780 Identities=67% Similarity=1.120 Sum_probs=738.8
Q ss_pred CCcccccchhhhccCCCCCCCCCCCCCCccccccccccCCCCCCCCCCCCCCC-CCCCCCcEEEEECCCccceeecCCC-
Q 003999 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDAT-SSGSRERKIIVANMLPLHAKRDTET- 78 (780)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~iivsnrlP~~~~~~~~~- 78 (780)
|+||||+|||||++|++..++++.+++|++|++||+++++|+++.++.+++.+ +..+.+|+||||||||+.+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~g~ 80 (854)
T PLN02205 1 MVSRSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSDGS 80 (854)
T ss_pred CcChhhccHHHhccCCcccccccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCCCC
Confidence 89999999999999999999999999999999999999999988888887766 4566789999999999999987543
Q ss_pred CcEEEEecCChhHHhhhhcccC-CCCeEEEEccCCCCChhHHHHHHHhhccCccEEEeecChHhhhhHhhcccccccccc
Q 003999 79 GRWCFSLDEDLLLLHLKDGFSS-DTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPL 157 (780)
Q Consensus 79 ~~~~~~~~~~~l~~~l~~~l~~-~~~~~wvg~~~~~~~~~~~~~v~~~l~~~~~~~pv~l~~~~~~~~y~gf~~~~LWpl 157 (780)
++|+|++++|||+++|++++.. ..+++||||++.++++++|+++.+.++++|+|+||||+++++++||+||||++|||+
T Consensus 81 ~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPl 160 (854)
T PLN02205 81 KGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPL 160 (854)
T ss_pred cceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccch
Confidence 7999999999999999988854 478999999999888888888888888899999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChh
Q 003999 158 FHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE 237 (780)
Q Consensus 158 ~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e 237 (780)
|||+++..|+++.+|+++.|++|++||++||++|+++++|++|+|||||||||+||+|||+++|+++||||||||||++|
T Consensus 161 fH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e 240 (854)
T PLN02205 161 FHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240 (854)
T ss_pred hccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH
Confidence 99998888887789999999999999999999999999986799999999999999999999999999999999999999
Q ss_pred HhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCC
Q 003999 238 IYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNL 317 (780)
Q Consensus 238 ~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~ 317 (780)
+||+||||++||+|||+||+|||||++|+|||++||+|+||++++.++|+++++|+||+++|+++|+|||+++|...+..
T Consensus 241 ifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~ 320 (854)
T PLN02205 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL 320 (854)
T ss_pred HHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999988888899999999999999999999999999999
Q ss_pred chhHHHHHHHHHHcC--CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHH
Q 003999 318 PATATKIKEIEKQFD--GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYL 395 (780)
Q Consensus 318 ~~~~~~~~~lr~~~~--~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~ 395 (780)
|++.+++++++++++ |+++|+||||+|++|||.+||+|||+||++||+|+|||+||||++|+|+++++|+++++++++
T Consensus 321 ~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~ 400 (854)
T PLN02205 321 PETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHS 400 (854)
T ss_pred hhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHH
Confidence 999999999999995 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCce
Q 003999 396 TAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSM 475 (780)
Q Consensus 396 lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~ 475 (780)
+|++||++||+.+|+||+|+++.++++|+.|||++||||+|||+|||||||++||+|||++.+.++++++.+..++++|+
T Consensus 401 ~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gv 480 (854)
T PLN02205 401 TVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480 (854)
T ss_pred HHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999988778888887777788999
Q ss_pred EEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHHHHhhcccc
Q 003999 476 LVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDHYSKR 555 (780)
Q Consensus 476 lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~~~~~~~~~ 555 (780)
||+|||+||+++|+||++|||||++++|+||.+||+||.+||+.||++++++|++||+.+|+++|+++|+++|++|++++
T Consensus 481 LiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~ 560 (854)
T PLN02205 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRR 560 (854)
T ss_pred eEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred ccccCCCccceeeccCcccccCCHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc
Q 003999 556 CWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS 635 (780)
Q Consensus 556 ~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS 635 (780)
||++|+|++||+++++|+|++|++++|+++|+++++|+|++||||||+|..+....|+++++++|++|+++++|.|+|+|
T Consensus 561 ~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvS 640 (854)
T PLN02205 561 CWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVS 640 (854)
T ss_pred hcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999997755678999999999999999999999999
Q ss_pred CCChhhHHHHhccCCCceEEecCccEEeeCCCCceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeeccC
Q 003999 636 GRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDA 715 (780)
Q Consensus 636 GR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~a 715 (780)
||+++.|++||+.+++++++||||++++++++..|+......+..|++.++++++.|++++||++||.|+++++||||++
T Consensus 641 GR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~a 720 (854)
T PLN02205 641 ARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDA 720 (854)
T ss_pred CCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhC
Confidence 99999999999988789999999999999877789865444567899999999999999999999999999999999999
Q ss_pred CCCcccccHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH---cCCCCCc-cccCC
Q 003999 716 DPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLS---VCVRARA-CKLDD 780 (780)
Q Consensus 716 d~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~---l~i~~~~-~~~~~ 780 (780)
||+++.+|++++.++++..+.+.++.+.+|+++|||+|+|+|||.|+++|++. +|++++. +.+||
T Consensus 721 dpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GD 789 (854)
T PLN02205 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGD 789 (854)
T ss_pred ChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcC
Confidence 99999999999999999999888888999999999999999999999999865 5776643 34444
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-154 Score=1365.82 Aligned_cols=672 Identities=36% Similarity=0.657 Sum_probs=616.1
Q ss_pred CCcEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChh-HHHHHHHhhccCccEEEee
Q 003999 58 RERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDAS-EQEEVAQKLLDDFNCVPTF 136 (780)
Q Consensus 58 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~-~~~~v~~~l~~~~~~~pv~ 136 (780)
++|+||||||||+.+++++ +|+|+++++.|||+++|. ++ ...+++||||+|..++.+ +++.+.+. +.+|+|+|||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~-~g~~~~~~s~GGLvsaL~-~~-~~~~~~WVGw~g~~~~~~~~~~~~~~~-l~~~~~~pV~ 168 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRG-EDSWSLEISAGGLVSALL-GV-KEFEARWIGWAGVNVPDEVGQKALTKA-LAEKRCIPVF 168 (934)
T ss_pred CCCEEEEECCCCcceeecC-CCceEEeECCCCcHHHhc-cc-ccCCeEEEeeCCCCCCCcchhHHHHHH-hccCceEEEe
Confidence 6899999999999998865 489999999999999997 56 578999999999876653 45555444 5789999999
Q ss_pred cChHhhhhHhhccccccccccccccC-CCCC-CCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHH
Q 003999 137 LPHDLQKKFYLGFCKQHLWPLFHYML-PMCP-DHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPT 214 (780)
Q Consensus 137 l~~~~~~~~y~gf~~~~LWpl~H~~~-~~~~-~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~ 214 (780)
|+++++++||+||||++|||+|||+. +..+ ....+|+++.|++|++||++||++|+++++| +|+|||||||||+||.
T Consensus 169 l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-gD~VWVHDYHL~LlP~ 247 (934)
T PLN03064 169 LDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEE-GDVVWCHDYHLMFLPK 247 (934)
T ss_pred CCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHH
Confidence 99999999999999999999999973 2211 0124688899999999999999999999997 5999999999999999
Q ss_pred HHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcC
Q 003999 215 FLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFG 294 (780)
Q Consensus 215 ~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~g 294 (780)
|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|+||++... .++.++|
T Consensus 248 ~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~~G 323 (934)
T PLN03064 248 CLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVEDQG 323 (934)
T ss_pred HHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999998643 3588999
Q ss_pred eEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEE
Q 003999 295 RTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (780)
Q Consensus 295 r~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (780)
|.++|.++|+|||++.|...+..+++.+++++++++|+++++|+||||||++|||.+||+||++||++||+|+|||||||
T Consensus 324 r~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQ 403 (934)
T PLN03064 324 RLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQ 403 (934)
T ss_pred EEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcc
Q 003999 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 375 i~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
|+.|+|+++++|++++.++.++|++||++||+.+|.||+|+.+.++++|+.|+|++|||||+||+|||||||++||||||
T Consensus 404 Ia~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~ 483 (934)
T PLN03064 404 IAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (934)
T ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCccccccccCCCCCCCceEEEcCCCCccccC-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCH
Q 003999 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDV 533 (780)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~ 533 (780)
.+ ++|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+
T Consensus 484 ~~---------------~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~ 548 (934)
T PLN03064 484 DS---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTA 548 (934)
T ss_pred cC---------------CCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCH
Confidence 63 57999999999999999 489999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccCCCccceeeccCcccccCCHHHHHHHHHhccCceEEeCCCCCCCCCCCC-----
Q 003999 534 AYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSI----- 608 (780)
Q Consensus 534 ~~Wa~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~----- 608 (780)
.+|+++|+.+|+++..++..+ + .. .+++|+.+.+.++|+++++|+|||||||||+|+.+.
T Consensus 549 ~~Wa~~fl~~L~~~~~~~~~~-~-----------~~---~~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~ 613 (934)
T PLN03064 549 QEWAETFVSELNDTVVEAQLR-T-----------RQ---VPPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRG 613 (934)
T ss_pred HHHHHHHHHHHHHHHhhhhcc-c-----------cc---cCCCCCHHHHHHHHHhccceEEEEecCceeccCCCCccccc
Confidence 999999999999886543211 1 11 124789999999999999999999999999997532
Q ss_pred ------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCceEe-cCCCcChhH
Q 003999 609 ------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWET-NHLGADLEW 681 (780)
Q Consensus 609 ------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w~~-~~~~~d~~w 681 (780)
...|+++++++|++|++||+|.|+|+|||+++.|++||+.+ +++++||||++++.++ ..|.. +....+.+|
T Consensus 614 ~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~~-~~w~~~~~~~~~~~W 691 (934)
T PLN03064 614 DQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHTK-GEWMTTMPEHLNMDW 691 (934)
T ss_pred ccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecCC-CcceeccccccchHH
Confidence 33578999999999999999999999999999999999987 7999999999999874 57973 334446789
Q ss_pred HHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHH-HHHhcCCCeEEEEcCeEEEEEeCCCCHHH
Q 003999 682 KKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHL-ESVLANEPAVVKRGQHIVEVKPQVLRPSS 760 (780)
Q Consensus 682 k~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L-~~~l~~~~v~v~~g~~~vEI~p~gvsKG~ 760 (780)
++.+.++|++|+++|||++||.|+++++||||++||+++..||+++.++| ...+++.++.|+.|+++|||+|.|+|||.
T Consensus 692 ~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~ 771 (934)
T PLN03064 692 VDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGA 771 (934)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999 45666778999999999999999999999
Q ss_pred HHHHHHHHcC
Q 003999 761 ISVSLSLSVC 770 (780)
Q Consensus 761 al~~Ll~~l~ 770 (780)
|+++|++.+.
T Consensus 772 Av~~ll~~~~ 781 (934)
T PLN03064 772 AIDRILGEIV 781 (934)
T ss_pred HHHHHHHhhh
Confidence 9999999763
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-145 Score=1301.20 Aligned_cols=672 Identities=36% Similarity=0.672 Sum_probs=610.5
Q ss_pred CCCCcEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChh-HHHHHHHhhccCccEEE
Q 003999 56 GSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDAS-EQEEVAQKLLDDFNCVP 134 (780)
Q Consensus 56 ~~~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~-~~~~v~~~l~~~~~~~p 134 (780)
..++|+||||||||+.+.+++ +|+|+|++++|||+++|. ++ ...+++||||+|.+++++ ++..+.+ .+.+|+|+|
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~-~~~~~~~~~~ggl~~al~-~~-~~~~~~Wvgw~g~~~~~~~~~~~~~~-~~~~~~~~p 83 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTG-EDSWSLEMSPGGLVSALL-GV-KEFETKWIGWPGVDVHDEIGKAALTE-SLAEKGCIP 83 (797)
T ss_pred cCCCCEEEEECCCCccceecC-CCceEEeeCCCCHHHHHH-HH-HhcCceEEEeCCCcCCcccchhHHHH-HhhcCCeEE
Confidence 457899999999999988764 489999999999999997 55 457999999999876554 3444443 467899999
Q ss_pred eecChHhhhhHhhcccccccccccccc-CCCCCC-CCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchH
Q 003999 135 TFLPHDLQKKFYLGFCKQHLWPLFHYM-LPMCPD-HGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVL 212 (780)
Q Consensus 135 v~l~~~~~~~~y~gf~~~~LWpl~H~~-~~~~~~-~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~ll 212 (780)
||| ++++++||+||||++|||+|||+ .+..+. ...+|+++.|++|++||++||++|++.++| +|+|||||||||+|
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWvhDYhL~ll 161 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEE-GDVVWCHDYHLMFL 161 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhhH
Confidence 999 99999999999999999999998 332222 114566789999999999999999999997 59999999999999
Q ss_pred HHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEE
Q 003999 213 PTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDY 292 (780)
Q Consensus 213 p~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~ 292 (780)
|+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|+|||++||+|++|+++.. .++.+
T Consensus 162 p~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~----~~i~~ 237 (797)
T PLN03063 162 PQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTH----EGVVD 237 (797)
T ss_pred HHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccC----CceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999987653 24779
Q ss_pred cCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEE
Q 003999 293 FGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVL 372 (780)
Q Consensus 293 ~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvL 372 (780)
+|+.++|.++|+|||++.|.+....+++.+...+++++++++++|++|||+|+.|||.++|+||++||+++|+++++++|
T Consensus 238 ~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvL 317 (797)
T PLN03063 238 QGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVML 317 (797)
T ss_pred CCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEE
Confidence 99999999999999999998877777777777889999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhh
Q 003999 373 VQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIV 452 (780)
Q Consensus 373 vqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~a 452 (780)
|||+.|+|+++++|+++++++++++++||.+||+.+|.||+|+.+.++.+++.++|++|||||+||++||||||++||||
T Consensus 318 vqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA 397 (797)
T PLN03063 318 VQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVA 397 (797)
T ss_pred EEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccccccCCCCCCCceEEEcCCCCccccC-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhC
Q 003999 453 CRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTH 531 (780)
Q Consensus 453 c~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~ 531 (780)
||.+ ++|++|+|||+|+++++ .+|++|||||++++|+||.++|+|+++||+.|+++++++|++|
T Consensus 398 ~g~p---------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~ 462 (797)
T PLN03063 398 CQKA---------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTH 462 (797)
T ss_pred eecC---------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhC
Confidence 9863 46999999999999999 4899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhhccccccccCCCccceeeccCcccccCCHHHHHHHHHhccCceEEeCCCCCCCCCCC----
Q 003999 532 DVAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETS---- 607 (780)
Q Consensus 532 ~~~~Wa~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~---- 607 (780)
|+.+|+++|+++|+++++.+..+. ...+.+|+.+.+.++|+++++|+|||||||||++..+
T Consensus 463 ~~~~Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~ 527 (797)
T PLN03063 463 SAQKWADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIK 527 (797)
T ss_pred CHHHHHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccc
Confidence 999999999999999987643210 1234578999999999999999999999999998754
Q ss_pred -CCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCceEecC-CCcChhHHHHH
Q 003999 608 -IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNH-LGADLEWKKIV 685 (780)
Q Consensus 608 -~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w~~~~-~~~d~~wk~~v 685 (780)
....|+++++++|++|+++|+|.|+|+|||+++.|++||+.+ +++++||||++++.. +..|.... ...+.+|++.+
T Consensus 528 p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~-~~~w~~~~~~~~~~~w~~~v 605 (797)
T PLN03063 528 EMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHT-SGEWVTTMPEHMNLDWVDGV 605 (797)
T ss_pred cccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecC-CCceeeccccccChhHHHHH
Confidence 335689999999999999999999999999999999999975 799999999999976 45798543 33467899999
Q ss_pred HHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHH-HHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHH
Q 003999 686 EPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHL-ESVLANEPAVVKRGQHIVEVKPQVLRPSSISVS 764 (780)
Q Consensus 686 ~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L-~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~ 764 (780)
.++|++|++++||++||.|+++++||||++||+++..|++++.++| +..+.+.++.++.|+++|||+|+|+|||.|++.
T Consensus 606 ~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ 685 (797)
T PLN03063 606 KNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGR 685 (797)
T ss_pred HHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHH
Confidence 9999999999999999999999999999999999999999999998 445567789999999999999999999999999
Q ss_pred HHHHc
Q 003999 765 LSLSV 769 (780)
Q Consensus 765 Ll~~l 769 (780)
|++.+
T Consensus 686 ll~~~ 690 (797)
T PLN03063 686 ILGEI 690 (797)
T ss_pred HHHHh
Confidence 99986
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-135 Score=1215.87 Aligned_cols=667 Identities=36% Similarity=0.651 Sum_probs=609.2
Q ss_pred CcEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCCh---hHHHHHHHhhccCccEEEe
Q 003999 59 ERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDA---SEQEEVAQKLLDDFNCVPT 135 (780)
Q Consensus 59 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~---~~~~~v~~~l~~~~~~~pv 135 (780)
+|+||||||+|+.+++++ |+|++++++|||+++|.+.+ ...+++||||+|.+.+. +++.++. ..+.+|+|+||
T Consensus 1 ~~livvsnr~p~~~~~~~--~~~~~~~~~ggl~~~l~~~~-~~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v 76 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED--GGVELTPSVGGLATGLRSFH-ERGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPV 76 (726)
T ss_pred CCEEEEEcCCCcceeecC--CceEEeeCCCchHHHHHHHh-hcCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEE
Confidence 489999999999988753 58999999999999997555 45789999999987553 2333343 34678999999
Q ss_pred ecChHhhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHH
Q 003999 136 FLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTF 215 (780)
Q Consensus 136 ~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~ 215 (780)
||+++++++||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++| +|+|||||||||+||.+
T Consensus 77 ~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~-~d~vwvhDYhl~l~p~~ 150 (726)
T PRK14501 77 FLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARP-GDVVWVHDYQLMLLPAM 150 (726)
T ss_pred eCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCchhhhHHHH
Confidence 99999999999999999999999999876 3799999999999999999999999998 59999999999999999
Q ss_pred HHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCe
Q 003999 216 LRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGR 295 (780)
Q Consensus 216 lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr 295 (780)
||++.|+++||||||+|||++|+|++||+|++||+|||+||+|||||++|++||++||+|++++++.. .++.++|+
T Consensus 151 lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~----~~~~~~gr 226 (726)
T PRK14501 151 LRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETEL----GEIRLGGR 226 (726)
T ss_pred HHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCC----CeEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999987543 25789999
Q ss_pred EEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEE
Q 003999 296 TVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQI 375 (780)
Q Consensus 296 ~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 375 (780)
.++|.++|+|||++.|.+....+++.+..+++|++++++++|++|||+++.||+..+|+||++|++++|+++|+++|+||
T Consensus 227 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v 306 (726)
T PRK14501 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQV 306 (726)
T ss_pred EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEE
Confidence 99999999999999999887777777778889999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhccc
Q 003999 376 VNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQ 455 (780)
Q Consensus 376 ~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~ 455 (780)
+.|+|.+.++|+++++++.+++++||++||+.+|.||+++.+.++++|+.++|++|||||+||++||||||++||||||.
T Consensus 307 ~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~ 386 (726)
T PRK14501 307 AVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT 386 (726)
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcC
Confidence 99998877999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCccccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHH
Q 003999 456 GTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAY 535 (780)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~ 535 (780)
+ +.|++|+|+++|+++++.+|++|||||++++|+||.++|+||.+|++.|+++++++|.+||+..
T Consensus 387 ~---------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~ 451 (726)
T PRK14501 387 D---------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHK 451 (726)
T ss_pred C---------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHH
Confidence 4 3589999999999999988999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCCCccceeeccCcccccCCHHHHHHHHHhccCceEEeCCCCCCCCCCC--CCCCCC
Q 003999 536 WARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETS--IIKSPG 613 (780)
Q Consensus 536 Wa~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~--~~~~ps 613 (780)
|+++|+++++++++.+... .+..|+.|+++.+..+|+++++|+|+|||||||++... ....|+
T Consensus 452 w~~~~l~~l~~~~~~~~~~---------------~~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~ 516 (726)
T PRK14501 452 WASDFLDELREAAEKNKAF---------------ASKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPD 516 (726)
T ss_pred HHHHHHHHHHHHHhhhhcc---------------ccccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCC
Confidence 9999999999988765321 12236678999999999999999999999999999642 335689
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCceEecCCCcChhHHHHHHHHHHHHH
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYT 693 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w~~~~~~~d~~wk~~v~~i~~~~~ 693 (780)
++++++|++|++++||.|+|+|||++..++++|+.+ .+++|||||++++.++ ..|..... .+..|++.++++++.+.
T Consensus 517 ~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~~-~~w~~~~~-~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 517 KELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAPG-GEWQLLEP-VATEWKDAVRPILEEFV 593 (726)
T ss_pred HHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCCC-CceEECCC-cchhHHHHHHHHHHHHH
Confidence 999999999999889999999999999999999887 5899999999999664 57876432 46789999999999999
Q ss_pred hcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCC
Q 003999 694 EATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVR 772 (780)
Q Consensus 694 e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~ 772 (780)
++++|+++|.|+.+++|||+++|++++..+++++.++++..+.+.++.+.+|+.++||+|+++|||.|+++|++.++.+
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d 672 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYD 672 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCC
Confidence 9999999999999999999999999998889999999998888888899999999999999999999999999944333
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-128 Score=1114.07 Aligned_cols=667 Identities=54% Similarity=0.928 Sum_probs=635.3
Q ss_pred CCcEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChhHHHHHHHhhccCccEEEeec
Q 003999 58 RERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFL 137 (780)
Q Consensus 58 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~~~~~v~~~l~~~~~~~pv~l 137 (780)
..|+|+|||+||+.+.+..+++.|.|+++.+|++.++++++. .++..||||++.+++.++++.+.+.++..++|+|||+
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~ 80 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFL 80 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeec
Confidence 579999999999999766778999999999999999986665 7889999999988999999999999999999999999
Q ss_pred ChHhhhhHhhcccccccccccccc-CCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHH
Q 003999 138 PHDLQKKFYLGFCKQHLWPLFHYM-LPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFL 216 (780)
Q Consensus 138 ~~~~~~~~y~gf~~~~LWpl~H~~-~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~l 216 (780)
+++...++|++|||++|||+|||+ .|..+.+. .|+.+.|++|+.+|++||++|++.++ ++|+|||||||||++|+|+
T Consensus 81 ~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 81 DDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhh
Confidence 999999999999999999999999 67666654 78899999999999999999999999 5799999999999999999
Q ss_pred HHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeE
Q 003999 217 RKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRT 296 (780)
Q Consensus 217 r~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~ 296 (780)
|++.++++||||+|+|||++|+|+++|.|++||++|++||+|||||++|+|||++||.|++++++.++.+..++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888889999999
Q ss_pred EEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEE
Q 003999 297 VYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIV 376 (780)
Q Consensus 297 ~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 376 (780)
+.|.++|+|||+.+|......+.+..+..+++..++|+++|+||||+|+.||+.+++.||+++|++||+|+++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccC
Q 003999 377 NPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQG 456 (780)
Q Consensus 377 ~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~ 456 (780)
+|+++++++|++++.++..++.+||++||+..+.||+++...++..++.|+|.+||||+++++||||||+++||++|+++
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred CCccccccccCCCCCCCceEEEcCCCCccccC-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHH
Q 003999 457 TPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAY 535 (780)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~ 535 (780)
+.+++|+|||+|+++++ ++++++||||.+++|.+|..||+|+++|+..|+.++++++..|+..+
T Consensus 399 ---------------~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~ 463 (732)
T KOG1050|consen 399 ---------------KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVY 463 (732)
T ss_pred ---------------cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHH
Confidence 56999999999999999 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCCCccceeeccCcccccCCHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHH
Q 003999 536 WARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPE 615 (780)
Q Consensus 536 Wa~~~l~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~ 615 (780)
|+.+|++.+ ++||+.|+ +.+++..+ |+.+.+++.|+++++|+|++|||||+++..++.
T Consensus 464 W~~~~~~~l---------~~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~------ 521 (732)
T KOG1050|consen 464 WAKSFLQGL---------KRIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK------ 521 (732)
T ss_pred HHHHHHHhh---------hhhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch------
Confidence 999999844 45677788 88887765 789999999999999999999999999855432
Q ss_pred HHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCceEecCCCcChhHHHHHHHHHHHHHhc
Q 003999 616 VISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEA 695 (780)
Q Consensus 616 ~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w~~~~~~~d~~wk~~v~~i~~~~~e~ 695 (780)
++..|+.||+||+|.|+|+|||++..+++|+..++++|++||||+++|++++ |+++. .+.+|++.+.++|++|+++
T Consensus 522 ~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~er 597 (732)
T KOG1050|consen 522 AISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYTER 597 (732)
T ss_pred HHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999976 99865 6889999999999999999
Q ss_pred CCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcC
Q 003999 696 TDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVC 770 (780)
Q Consensus 696 t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~ 770 (780)
||||++|.|+++++|||+++||+||.+||+||+++|+. .+.++.++.|+..|||+|.|+|||.++..++..++
T Consensus 598 t~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~~ 670 (732)
T KOG1050|consen 598 TPGSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEMV 670 (732)
T ss_pred CCCceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999998 78899999999999999999999999999999999
|
|
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-121 Score=1015.49 Aligned_cols=456 Identities=27% Similarity=0.516 Sum_probs=419.8
Q ss_pred CCcEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChhHHHHHHHhhccCccEEEeec
Q 003999 58 RERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFL 137 (780)
Q Consensus 58 ~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~~~~~v~~~l~~~~~~~pv~l 137 (780)
++|+||||||+|+.. +. +.+.|||+++|.+.+. ..+++||||+|...+++ +.+.....++++|+||+|
T Consensus 1 m~rLivVSNRlp~~~------~~---~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~~--~~~~~~~~~~~~~~~v~L 68 (474)
T PRK10117 1 MSRLVVVSNRIAPPD------EH---KASAGGLAVGILGALK-AAGGLWFGWSGETGNED--QPLKKVKKGNITWASFNL 68 (474)
T ss_pred CCCEEEEECCCcCCC------CC---CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCCc--ccchhhhcCCceEEEecC
Confidence 369999999999632 11 4457999999987664 57899999999753321 223333345799999999
Q ss_pred ChHhhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHH
Q 003999 138 PHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLR 217 (780)
Q Consensus 138 ~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr 217 (780)
+++++++||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++| +|+|||||||||+||++||
T Consensus 69 ~~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~-~D~VWVHDYhL~llp~~LR 142 (474)
T PRK10117 69 SEQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKD-DDIIWIHDYHLLPFASELR 142 (474)
T ss_pred CHHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeccHhhHHHHHHH
Confidence 999999999999999999999999876 3799999999999999999999999998 5999999999999999999
Q ss_pred HhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEE
Q 003999 218 KRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV 297 (780)
Q Consensus 218 ~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~ 297 (780)
++.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ..+.++||.+
T Consensus 143 ~~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v 219 (474)
T PRK10117 143 KRGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAF 219 (474)
T ss_pred HhCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEE
Confidence 9999999999999999999999999999999999999999999999999999999999999876432 2467889999
Q ss_pred EEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEc
Q 003999 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVN 377 (780)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~ 377 (780)
+|.++|+|||++.|...+..+ +..++++++++++++++|+||||+||+|||.++|+||++||++||+|+|||+|+||+.
T Consensus 220 ~v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~ 298 (474)
T PRK10117 220 RTEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAP 298 (474)
T ss_pred EEEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcC
Confidence 999999999999999887755 5677889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCC
Q 003999 378 PARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGT 457 (780)
Q Consensus 378 p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~ 457 (780)
|+|++.++|++++++++++|++||++||+.+|.||+|+++.++++++.|+|++||||+|||+|||||||++||+||+.+
T Consensus 299 psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~- 377 (474)
T PRK10117 299 TSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP- 377 (474)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999862
Q ss_pred CccccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHH
Q 003999 458 PIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWA 537 (780)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa 537 (780)
+++|+||+|||+||+++|++|++|||||++++|+||.+||+||.+||+.|+++++++|.+||+.+|+
T Consensus 378 -------------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~ 444 (474)
T PRK10117 378 -------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQ 444 (474)
T ss_pred -------------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHH
Confidence 2579999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 003999 538 RSFAQDLERACR 549 (780)
Q Consensus 538 ~~~l~~l~~~~~ 549 (780)
++||.+|.++..
T Consensus 445 ~~fL~~L~~~~~ 456 (474)
T PRK10117 445 ECFISDLKQIVP 456 (474)
T ss_pred HHHHHHHHHhhh
Confidence 999999998743
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-119 Score=1015.14 Aligned_cols=462 Identities=28% Similarity=0.467 Sum_probs=427.0
Q ss_pred EECCCccceeecCCC-CcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCCh-hHH-HHHHHhhccCccEEEeecChH
Q 003999 64 VANMLPLHAKRDTET-GRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDA-SEQ-EEVAQKLLDDFNCVPTFLPHD 140 (780)
Q Consensus 64 vsnrlP~~~~~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~-~~~-~~v~~~l~~~~~~~pv~l~~~ 140 (780)
||||||+.+++++++ .+|.+++++|||+++|.+.+....+++||||+|.+.++ ++. ..+......+|+|+||||+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 799999999986542 34888999999999998777556789999999975322 111 112212245799999999999
Q ss_pred hhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhc
Q 003999 141 LQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRF 220 (780)
Q Consensus 141 ~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~ 220 (780)
++++||+||||++|||+|||++.. ..|++.+|++|++||++||++|++.+++ +|+|||||||||+||.+||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAE-GATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998665 4799999999999999999999999997 5999999999999999999999
Q ss_pred CCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCc--------------
Q 003999 221 NRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRG-------------- 286 (780)
Q Consensus 221 ~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g-------------- 286 (780)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|+||+++....+
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999988754321
Q ss_pred ---eeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhC
Q 003999 287 ---HIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQH 363 (780)
Q Consensus 287 ---~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~ 363 (780)
.+++.|+||+++|+++|+|||++.|.+....+++.++++++|+++.++++|+||||+|++|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 23588999999999999999999999988888888889999999999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCC
Q 003999 364 PGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGM 443 (780)
Q Consensus 364 P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGm 443 (780)
|+++||++||||+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++.+++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Q 003999 444 NLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEK 523 (780)
Q Consensus 444 nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~ 523 (780)
|||++|||||+.+ ++||||+|||+||+++|.+|++|||||++++|+||.+||+||.+||+.||++
T Consensus 395 NLVa~Eyva~~~~---------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~ 459 (487)
T TIGR02398 395 NLVAKEYVAAQGL---------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMRE 459 (487)
T ss_pred CcchhhHHhhhcC---------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999863 4699999999999999999999999999999999999999999999999999
Q ss_pred HhhHhhhCCHHHHHHHHHHHHHH
Q 003999 524 HYRYVSTHDVAYWARSFAQDLER 546 (780)
Q Consensus 524 ~~~~V~~~~~~~Wa~~~l~~l~~ 546 (780)
++++|.+||+.+|+++|+.+|+.
T Consensus 460 l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 460 MFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHHHhhCCHHHHHHHHHHHhhh
Confidence 99999999999999999999975
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-120 Score=1023.07 Aligned_cols=467 Identities=45% Similarity=0.844 Sum_probs=358.2
Q ss_pred cEEEEECCCccceeecCCCCc--EEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChhH--HHHHHHhhccCccEEEe
Q 003999 60 RKIIVANMLPLHAKRDTETGR--WCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASE--QEEVAQKLLDDFNCVPT 135 (780)
Q Consensus 60 r~iivsnrlP~~~~~~~~~~~--~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~~--~~~v~~~l~~~~~~~pv 135 (780)
|+||||||||+.+++++++|+ |+++.+.|||+++|. ++.+..+++||||++.+.+..+ ++.+.+.+.++|+|+||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~-~l~~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALD-PLLKKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp -------------------------GGGGS-HHHHHHH-HHHHHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHH-HHHhcCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 799999999999998875566 777888999999986 4444589999999998766544 45566677899999999
Q ss_pred ecChHhhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHH
Q 003999 136 FLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTF 215 (780)
Q Consensus 136 ~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~ 215 (780)
||+++++++||+||||++|||+|||..+..+ ....|+.+.|++|++||++||++|++.+++ +|+|||||||||+||++
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~-~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~~ 158 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRP-DLARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQM 158 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG-----G----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHHH
T ss_pred EcCHHHHHHHHHhhhhhccCccccccccccc-ccchhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHHH
Confidence 9999999999999999999999999876222 225799999999999999999999999997 59999999999999999
Q ss_pred HHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCe
Q 003999 216 LRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGR 295 (780)
Q Consensus 216 lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr 295 (780)
||+++|+++||||||+|||++|+|++||+|++||+|||+||+|||||++|++||++||+|++|+++...+| ++.|+||
T Consensus 159 LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~Gr 236 (474)
T PF00982_consen 159 LRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNGR 236 (474)
T ss_dssp HHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETTE
T ss_pred HHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999887765 6999999
Q ss_pred EEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCC-CeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEE
Q 003999 296 TVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDG-KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (780)
Q Consensus 296 ~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~-~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (780)
.++|.++|+|||++.|...+.++++.+++++|++++++ +++|+||||+|++|||.+||+||++||++||+++|||+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999988889999999999999988 49999999999999999999999999999999999999999
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcc
Q 003999 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 375 i~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
|+.|+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.|+|++||||++||+|||||||++||+||+
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccccccCCCCCCCceEEEcCCCCccccCC-CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCH
Q 003999 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDV 533 (780)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~ 533 (780)
++ ++|+||+|||+||+++|. +|++|||||++++|+||.+||+||++||+.|+++++++|.+||+
T Consensus 397 ~~---------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~ 461 (474)
T PF00982_consen 397 DD---------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDV 461 (474)
T ss_dssp -T---------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-H
T ss_pred cC---------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCH
Confidence 74 479999999999999997 67999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 003999 534 AYWARSFAQDLER 546 (780)
Q Consensus 534 ~~Wa~~~l~~l~~ 546 (780)
.+|+++||++|++
T Consensus 462 ~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 462 QWWAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhC
Confidence 9999999999974
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-114 Score=956.51 Aligned_cols=466 Identities=39% Similarity=0.682 Sum_probs=431.6
Q ss_pred CCCCCcEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChhHHHHHHHhhccCccEEE
Q 003999 55 SGSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVP 134 (780)
Q Consensus 55 ~~~~~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~~~~~v~~~l~~~~~~~p 134 (780)
.....|+|+||||+|+...+..+++...++.++|||+++|++ +....+++|+||+|...+.++..........++...|
T Consensus 11 ~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~-~~~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (486)
T COG0380 11 PLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKP-LLRVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAP 89 (486)
T ss_pred cccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcch-hhHhhcceEEecCceeccccccchhhhhccccceEEE
Confidence 456789999999999998766666788899999999999984 4456899999999987642232222222345899999
Q ss_pred eecChHhhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHH
Q 003999 135 TFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPT 214 (780)
Q Consensus 135 v~l~~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~ 214 (780)
|+++.+++++||+||||++|||+|||+.+. ..|+++.|++|++||++||++|++.+++ +|+||||||||+|+|.
T Consensus 90 v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~-gDiIWVhDYhL~L~P~ 163 (486)
T COG0380 90 VILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEP-GDIIWVHDYHLLLVPQ 163 (486)
T ss_pred EecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEEechhhhhHH
Confidence 999999999999999999999999999876 4799999999999999999999999997 5999999999999999
Q ss_pred HHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEE---
Q 003999 215 FLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD--- 291 (780)
Q Consensus 215 ~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~--- 291 (780)
|||++.|+++||||||+|||++|+|+|||+|+|||+|||+||+|||||++|++||+++|+|+++.... ..+.
T Consensus 164 mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~~~ 238 (486)
T COG0380 164 MLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRFNG 238 (486)
T ss_pred HHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----ccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999986521 2233
Q ss_pred EcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCC-CeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCce
Q 003999 292 YFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDG-KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKV 370 (780)
Q Consensus 292 ~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~-~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~v 370 (780)
++|+.+++..+|+|||+..|......+.+..++.++++.+.+ +++|+||||+|++||+..+|+||++||++||+|+|||
T Consensus 239 ~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kv 318 (486)
T COG0380 239 ADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKV 318 (486)
T ss_pred cCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCce
Confidence 447999999999999999999999888888889999999976 9999999999999999999999999999999999999
Q ss_pred EEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhh
Q 003999 371 VLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKY 450 (780)
Q Consensus 371 vLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea 450 (780)
+|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+++.++.+++.|||++|||++|||+|||||||++||
T Consensus 319 vliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEy 398 (486)
T COG0380 319 VLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEY 398 (486)
T ss_pred EEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCccccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 451 IVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 451 ~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
+||+.+ ++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+.+||++|++++++.|.+
T Consensus 399 Va~q~~---------------~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~ 463 (486)
T COG0380 399 VAAQRD---------------KPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLT 463 (486)
T ss_pred HHhhcC---------------CCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Confidence 999863 57999999999999999899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q 003999 531 HDVAYWARSFAQDLERA 547 (780)
Q Consensus 531 ~~~~~Wa~~~l~~l~~~ 547 (780)
||+++|+++|+.+|.+.
T Consensus 464 ~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 464 HDVARWANSFLDDLAQA 480 (486)
T ss_pred hhHHHHHHHHHHHHHhc
Confidence 99999999999999873
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-108 Score=926.06 Aligned_cols=454 Identities=39% Similarity=0.708 Sum_probs=422.4
Q ss_pred cEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCCh-hHHHHHHHhhccCccEEEeecC
Q 003999 60 RKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDA-SEQEEVAQKLLDDFNCVPTFLP 138 (780)
Q Consensus 60 r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~-~~~~~v~~~l~~~~~~~pv~l~ 138 (780)
|+||||||+|+.+.++ + ++.+.|||+++|.+.+. ..+++||||+|...++ +++.++...+..+|+|+||||+
T Consensus 1 ~livvsnr~p~~~~~~---~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG---G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred CEEEEECCCCccccCC---C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 7999999999988653 2 67778999999986654 5799999999976553 3334555556788999999999
Q ss_pred hHhhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHH
Q 003999 139 HDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRK 218 (780)
Q Consensus 139 ~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~ 218 (780)
++++++||+||||++|||+|||+++. .+|++++|++|++||++||++|++.+++ +|+|||||||||++|.+||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHHh
Confidence 99999999999999999999999665 4799999999999999999999999997 59999999999999999999
Q ss_pred hcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEE
Q 003999 219 RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVY 298 (780)
Q Consensus 219 ~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~ 298 (780)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999877542 4678899999
Q ss_pred EEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcC
Q 003999 299 IKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNP 378 (780)
Q Consensus 299 i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 378 (780)
|.++|+|||++.|.+....+++.+..+++|++++++++|++|||+|+.||+..+|+||++|++++|+++++++|+||+.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999999887777777888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCC
Q 003999 379 ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458 (780)
Q Consensus 379 ~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~ 458 (780)
+|+++++|+++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||++||||||++||||||.+
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P-- 381 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDP-- 381 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred ccccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHH
Q 003999 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (780)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~ 538 (780)
..|+||+|+++|+++++.+|++|||||++++|+||.++|+||.+||+.|+++++++|.+||+..|++
T Consensus 382 -------------~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 448 (456)
T TIGR02400 382 -------------KDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWRE 448 (456)
T ss_pred -------------CCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHH
Confidence 3589999999999999989999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 003999 539 SFAQDLE 545 (780)
Q Consensus 539 ~~l~~l~ 545 (780)
+|+.+|.
T Consensus 449 ~~l~~l~ 455 (456)
T TIGR02400 449 DFLSDLN 455 (456)
T ss_pred HHHHHhh
Confidence 9999885
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-98 Score=852.54 Aligned_cols=459 Identities=44% Similarity=0.789 Sum_probs=426.3
Q ss_pred cEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChhHHHHHHHhhccCccEEEeecCh
Q 003999 60 RKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPH 139 (780)
Q Consensus 60 r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~~~~~v~~~l~~~~~~~pv~l~~ 139 (780)
|+||||||+|+.++++++ |.|.++++.|||+++|.+ +.+..+++||||++.+.+..+...+.+.++.+|+|+||||++
T Consensus 1 ~li~vsnr~p~~~~~~~~-~~~~~~~~~ggl~~~l~~-~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD-GEFEARRSAGGLATALKG-LLKRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred CEEEEECCCCceeEEcCC-CceEeccCCCcHHHHHHH-HHhcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 689999999999998754 799999999999999975 445679999999998876655444556668899999999999
Q ss_pred HhhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHh
Q 003999 140 DLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKR 219 (780)
Q Consensus 140 ~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~ 219 (780)
+++++||+||||++|||+|||..+. .+|++++|++|+++|++||++|++.+++ +|+||||||||+++|.+||++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999876 4799999999999999999999999997 599999999999999999999
Q ss_pred cCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEE
Q 003999 220 FNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 299 (780)
Q Consensus 220 ~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i 299 (780)
.++++||||+|||||++|+|+++|+|++|+++||+||+|||||++|++||+++|+++++.+.... ..+.++|+.++|
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~---~~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDD---GGVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCC---ceEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999886652 358899999999
Q ss_pred EEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCC
Q 003999 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPA 379 (780)
Q Consensus 300 ~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 379 (780)
.++|+|||++.|.+....++..+++.+++..++++++|++|||+++.||+..+|+||+++++++|+++++++|+|||.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999988766666666666777777899999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCc
Q 003999 380 RGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPI 459 (780)
Q Consensus 380 r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~ 459 (780)
|+++++++++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||++||||||++||||||.+
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p--- 386 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD--- 386 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecC---
Confidence 99999999999999999999999999988999999999999999999999999999999999999999999999863
Q ss_pred cccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHH
Q 003999 460 MDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539 (780)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~ 539 (780)
++|++|+|+++|+++.+.+|++|||+|++++|+||.++|+|+++|++.|+++++++|.++|+..|+++
T Consensus 387 ------------~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~ 454 (460)
T cd03788 387 ------------DPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANS 454 (460)
T ss_pred ------------CCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 46899999999999988889999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 003999 540 FAQDL 544 (780)
Q Consensus 540 ~l~~l 544 (780)
|+.+|
T Consensus 455 ~l~~l 459 (460)
T cd03788 455 FLDDL 459 (460)
T ss_pred HHHhh
Confidence 99887
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=342.28 Aligned_cols=525 Identities=14% Similarity=0.128 Sum_probs=324.4
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhh-----------------cCCChHHHH-HhhhcCCEEEee
Q 003999 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR-----------------TLPVRDEIL-RGLLNCDLIGFH 261 (780)
Q Consensus 200 DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~-----------------~lp~r~eil-~~ll~~Dligf~ 261 (780)
|+||-|+++--.+...|++++ ++|.+++.|+.= .+-++ .++.|-+.- ..+-.||.|.-.
T Consensus 312 DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSLg--r~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas 388 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSLG--RDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS 388 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhh-CCCEEEECccch--hhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence 999999999888888888875 689999999741 11111 012222221 235679999998
Q ss_pred cHHHHHHHHHHH-------HhhhCceeccCCceeEEEEcCe-EEEEEEeecCCCchhhhhhcCCchh-------------
Q 003999 262 TFDYARHFLSCC-------SRMLGLDYESKRGHIGLDYFGR-TVYIKILPVGVHMGRLESVLNLPAT------------- 320 (780)
Q Consensus 262 t~~y~~~Fl~~~-------~r~l~~~~~~~~g~~~~~~~gr-~~~i~i~P~GId~~~~~~~~~~~~~------------- 320 (780)
|......-...- .|.|.. ..++ ++.++|+ ..++.++|+|||+++|.+.....+.
T Consensus 389 T~qE~~eq~~lY~~~~~~~~~~~~~--~~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~ 463 (1050)
T TIGR02468 389 TRQEIEEQWGLYDGFDVILERKLRA--RARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPD 463 (1050)
T ss_pred CHHHHHHHHHHhccCCchhhhhhhh--hhcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhccccccccccc
Confidence 887765432210 011100 0111 2333332 2378999999999999864211100
Q ss_pred HHHHHHHHHHc--CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHH----HHHHHHHH
Q 003999 321 ATKIKEIEKQF--DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDV----QEAKKETY 394 (780)
Q Consensus 321 ~~~~~~lr~~~--~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~----~~l~~ei~ 394 (780)
.....+++..+ +++++||+|+|+++.||+..+|+||..+.+..+.. ++++| +|... ...+. .+...++.
T Consensus 464 ~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~LI-iG~gd--d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 464 PPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI-MGNRD--DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred chhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEEE-EecCc--hhhhhhccchHHHHHHH
Confidence 01122444444 67899999999999999999999999986543321 23343 45311 11111 12234556
Q ss_pred HHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhc----ceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCC
Q 003999 395 LTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVA----ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDS 470 (780)
Q Consensus 395 ~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~A----Dv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~ 470 (780)
.++++.+- .+ .|. |.++++.+++.++|+.| ||||+||.+||||++++||||||
T Consensus 539 ~li~~lgL----~g--~V~-FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcG---------------- 595 (1050)
T TIGR02468 539 KLIDKYDL----YG--QVA-YPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG---------------- 595 (1050)
T ss_pred HHHHHhCC----CC--eEE-ecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhC----------------
Confidence 66655432 11 255 55789999999999998 69999999999999999999997
Q ss_pred CCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHH
Q 003999 471 PHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 471 ~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++|+.++ .++...+..++.+.+++|...++.+++.+...
T Consensus 596 ---lPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpe-lr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 596 ---LPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQ-LWAECRQNGLKNIHLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred ---CCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 4899999999888873 5999999999999999999998654 45555566788899999999999999888876
Q ss_pred HHhhcc-cccc-----cc-----C--------CCccceeeccCccccc----------CC----HHHHHHH---------
Q 003999 548 CRDHYS-KRCW-----GI-----G--------LGLGFRVLSLSPSFRR----------LS----IDHIVSA--------- 585 (780)
Q Consensus 548 ~~~~~~-~~~~-----~~-----g--------~g~~~~~~~~~~~f~~----------l~----~~~i~~~--------- 585 (780)
+..+.. ++.. .. + .++++.+ +-.... ++ ...|..+
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1050)
T TIGR02468 672 RPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSV---DGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPK 748 (1050)
T ss_pred hccCcccccccccccccccccCccccccccccchhhccc---cccccccccccccccccchhhHHHHHHHHHhhcccccc
Confidence 544311 0000 00 1 0011110 000000 00 0111111
Q ss_pred --------------HH--hccCceEE--eCCCCCCCCCCCCCCCCCHHHHHHHHHhcc---CCCCEEEEEcCCChhhHHH
Q 003999 586 --------------YR--KTERRAIF--LDYDGTVVPETSIIKSPGPEVISVLKTLCS---DPNNTVFIVSGRGRSSLSE 644 (780)
Q Consensus 586 --------------y~--~a~~rlI~--lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~---d~g~~V~IvSGR~~~~L~~ 644 (780)
|. ...+++|+ +|+|+| .. ..+.+.++++.+.+ ...+.++++|||+...+.+
T Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~-------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~ 820 (1050)
T TIGR02468 749 GSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD-------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQS 820 (1050)
T ss_pred ccccccccccccccCccccccceEEEEEeccCCC-CC-------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHH
Confidence 11 11245666 999999 32 23444555555542 2247799999999999999
Q ss_pred Hhcc--CC---CceEEecCccEEeeCC-----CCceEec---CCCcChhHH-HHHHHHHHHHHhc--------CCCceee
Q 003999 645 WLAP--CE---MLGIAAEHGYFIRWNK-----TSEWETN---HLGADLEWK-KIVEPVMRSYTEA--------TDGSNIE 702 (780)
Q Consensus 645 ~f~~--l~---~lgliaenG~~ir~~~-----~~~w~~~---~~~~d~~wk-~~v~~i~~~~~e~--------t~gs~iE 702 (780)
.+.. +| ...+||.-|+.|+++. +..|..- ...++..|. +.+++.+..+... .++...+
T Consensus 821 ~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q 900 (1050)
T TIGR02468 821 FLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEE 900 (1050)
T ss_pred HHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceec
Confidence 8854 33 2358999999998862 1223210 012345673 3466555544432 1334444
Q ss_pred cccce--EEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEE--EcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 703 IKESA--LVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVK--RGQHIVEVKPQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 703 ~k~~~--l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~--~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
..+.+ ....|.-.|++... ..+++...|+. ....+.++ ++..+++|.|..+|||.|+++|+.+||++...+.+
T Consensus 901 ~~~~q~~~k~SY~v~d~~~~~-~v~elr~~Lr~--~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~V 977 (1050)
T TIGR02468 901 DEESSTDHCYAFKVKDPSKVP-PVKELRKLLRI--QGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAV 977 (1050)
T ss_pred ChhhCCCceEEEEecCcccCc-cHHHHHHHHHh--CCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEE
Confidence 43322 33334312333211 23444444432 12234433 34589999999999999999999999999988854
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-30 Score=265.38 Aligned_cols=191 Identities=30% Similarity=0.438 Sum_probs=164.1
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCC--CCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEE
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPET--SIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIA 655 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~--~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgli 655 (780)
....+.+.|..+++|+|++||||||+++. +....|+++++++|++|+++++|.|+|+|||+..+++.|++ +++++++
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 44567778999999999999999999975 44578899999999999999999999999999999999998 7899999
Q ss_pred ecCccEEeeCCCCceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHh
Q 003999 656 AEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVL 735 (780)
Q Consensus 656 aenG~~ir~~~~~~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l 735 (780)
||||+++|..++.-|.......+..|++.+..++++|.+++||+++|.|+.++.||||+++++.+..++...... .
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~----~ 159 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAAT----L 159 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHh----c
Confidence 999999998877777876666677899999999999999999999999999999999999776543332222211 2
Q ss_pred cCCC-eEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCC
Q 003999 736 ANEP-AVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVRA 773 (780)
Q Consensus 736 ~~~~-v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~ 773 (780)
.+.. +.++.|+..||++|.++|||.+++++++....+.
T Consensus 160 ~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~ 198 (266)
T COG1877 160 INELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFDG 198 (266)
T ss_pred cccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCCC
Confidence 2333 8899999999999999999999999999887764
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-30 Score=267.17 Aligned_cols=185 Identities=38% Similarity=0.567 Sum_probs=135.6
Q ss_pred EeCCCCCCCCCCC--CCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCceEe
Q 003999 595 FLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWET 672 (780)
Q Consensus 595 ~lD~DGTL~~~~~--~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w~~ 672 (780)
||||||||.|+.+ ....|+++++++|++|+++++|.|+|+|||+.+.++ .|..+++++++||||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~-~~~~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLE-RFGGIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHH-HH-S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhH-HhcCCCCceEEEEeeEEeccCccccccc
Confidence 7999999999763 446788999999999999999999999999999954 4556789999999999999998777876
Q ss_pred cCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCC-CeEEEEcCeEEEE
Q 003999 673 NHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANE-PAVVKRGQHIVEV 751 (780)
Q Consensus 673 ~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~-~v~v~~g~~~vEI 751 (780)
.....+..|++.+.++++.+.+++||++||.|+++++||||+++++|+..+++++.+++.+.+... ++.+..|+++|||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 444556789999999999999999999999999999999999999999999999999999877765 8999999999999
Q ss_pred EeCCCCHHHHHHHHHHHcCCC----CCccccCC
Q 003999 752 KPQVLRPSSISVSLSLSVCVR----ARACKLDD 780 (780)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~i~----~~~~~~~~ 780 (780)
+|.+++||.|+++|++.++.. --.+++||
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GD 192 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGD 192 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEES
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecC
Confidence 999999999999999999875 34455544
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=245.36 Aligned_cols=189 Identities=23% Similarity=0.274 Sum_probs=150.8
Q ss_pred HHHHhccCceEEeCCCCCCCCCC--CCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccE
Q 003999 584 SAYRKTERRAIFLDYDGTVVPET--SIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYF 661 (780)
Q Consensus 584 ~~y~~a~~rlI~lD~DGTL~~~~--~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ 661 (780)
.+|.+++++++||||||||.|+. +....++++++++|++|+++ ..|+|||||+++.|+++++. +.++++++||++
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 37899999999999999999976 34567899999999999997 36999999999999999975 579999999999
Q ss_pred EeeCCC----CceEec-------------CCCcChhHHHHHHHHHHH---HHhcCCCceeecccceEEEeeccCCCCccc
Q 003999 662 IRWNKT----SEWETN-------------HLGADLEWKKIVEPVMRS---YTEATDGSNIEIKESALVWHHQDADPDFGS 721 (780)
Q Consensus 662 ir~~~~----~~w~~~-------------~~~~d~~wk~~v~~i~~~---~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~ 721 (780)
++.+.+ ..|..+ .. ...+|.+.+.++++. ++++++|+++|.|..+++||||+++++++.
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~-~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~ 267 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQ-PASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWP 267 (384)
T ss_pred eecCCCCcccccccccccccccccccccccc-cchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHH
Confidence 986421 122211 11 145688777777666 455679999999999999999999877654
Q ss_pred ccHHHHHHHHHHHhcCCC-eEEEEcCeEEEEEe-CCCCHHHHHHHHHHHcCCCCCc----cccCC
Q 003999 722 CQAKELLDHLESVLANEP-AVVKRGQHIVEVKP-QVLRPSSISVSLSLSVCVRARA----CKLDD 780 (780)
Q Consensus 722 ~qa~el~~~L~~~l~~~~-v~v~~g~~~vEI~p-~gvsKG~al~~Ll~~l~i~~~~----~~~~~ 780 (780)
.++.+ +..++.+.+ +.+..|+.++||+| .++|||.|+++|++.++++..+ +++||
T Consensus 268 ~~~~~----l~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGD 328 (384)
T PLN02580 268 LVAQC----VHDVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGD 328 (384)
T ss_pred HHHHH----HHHHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECC
Confidence 44444 344445554 88999999999999 5999999999999999998763 46666
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=234.43 Aligned_cols=186 Identities=27% Similarity=0.389 Sum_probs=152.8
Q ss_pred ccCceEEeCCCCCCCCCC--CCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCC
Q 003999 589 TERRAIFLDYDGTVVPET--SIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNK 666 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~--~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~ 666 (780)
|++++|+|||||||++.. +....|+++++++|++|++++++.|+|+|||+...+...+ .+++++++++||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEeecCEEEecCC
Confidence 578999999999999964 3446688999999999999999999999999998887665 3478999999999998643
Q ss_pred CC-ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeeccC-CCCcccccHHHHHHHHHHHhcCCCeEEEE
Q 003999 667 TS-EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDA-DPDFGSCQAKELLDHLESVLANEPAVVKR 744 (780)
Q Consensus 667 ~~-~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~a-d~d~~~~qa~el~~~L~~~l~~~~v~v~~ 744 (780)
.. .|... ......|++.+.++++++.++ ||+++|.|+.+++||||.+ |++++..|+.++..++. ...++.+..
T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNL-TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeec-hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 22 46543 222247998899999999887 9999999999999999999 88887777777665543 344788999
Q ss_pred cCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc-ccCC
Q 003999 745 GQHIVEVKPQVLRPSSISVSLSLSVCVRARAC-KLDD 780 (780)
Q Consensus 745 g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~-~~~~ 780 (780)
|+.++|++|.++|||.+++++++.+++++..| ++||
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD 191 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVYLGD 191 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEEEcC
Confidence 99999999999999999999999999876443 3443
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.5e-25 Score=243.64 Aligned_cols=301 Identities=15% Similarity=0.151 Sum_probs=208.4
Q ss_pred HHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhh
Q 003999 174 RVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL 253 (780)
Q Consensus 174 ~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll 253 (780)
...+..|...++.++.++....+ .|+||+|+++.+.++...+. .++|++++.|+++.... .. ....+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~--~Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~-~~---~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDLD--ADVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN-RR---VWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccCC--CCEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc-HH---HHHHHHHHHH
Confidence 45678888888888765333333 49999999998777666543 36789999999875321 00 1122233344
Q ss_pred cCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--
Q 003999 254 NCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-- 331 (780)
Q Consensus 254 ~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-- 331 (780)
.+|.+.+.+.++++.+ +..+ ++ ++|+|||+...... +...+....+++++
T Consensus 135 ~~d~~i~~~~~~~~~~----------------------~~~~--~~-vipngvd~~~~~~~---~~~~~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQ----------------------VPPR--KV-IIPPSIDPLSGKNR---ELSPADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCC----------------------CCCc--eE-EeCCCCCCCccccC---CCCHHHHHHHHHHhCC
Confidence 6787777664322111 1112 23 89999997542211 11122344566666
Q ss_pred -CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 003999 332 -DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (780)
Q Consensus 332 -~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~ 410 (780)
+++++|++|||+++.||+..+++|++.+.+++|+++ |+++|..... .++..++. +++.+..+. . .
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~---~~~~~~~~~----~--~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVY---EEVLEYAEG----D--P 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHH---HHHHHHhCC----C--C
Confidence 478999999999999999999999999988888876 8888854321 12222222 222222211 1 1
Q ss_pred cEEEecCC-CCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-
Q 003999 411 PVVLIDRP-VPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL- 488 (780)
Q Consensus 411 pV~~~~~~-v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 488 (780)
.|.++... ++.+++.++|++||+|++||.+||||++++|||||| .|+|+|..+|..+.+
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-------------------~Pvv~s~~~~~~~~i~ 313 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKG-------------------KPVIAGPVGGIPLQIE 313 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-------------------CCEEEcCCCCchhhcc
Confidence 36666543 489999999999999999999999999999999997 489999999988877
Q ss_pred C--CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHH
Q 003999 489 S--GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLER 546 (780)
Q Consensus 489 ~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~ 546 (780)
+ .|++++ +.+++|++|.++++++ ++++.+.++.++++ ..+++...++++++.+++
T Consensus 314 ~~~~g~~~~--~~~~~a~~i~~ll~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 314 DGETGFLVD--TVEEAAVRILYLLRDP-ELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred cCCceEEeC--CcHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 3 378877 4678999999999875 45666667788877 569999999998877654
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-25 Score=239.60 Aligned_cols=187 Identities=21% Similarity=0.292 Sum_probs=153.1
Q ss_pred HhccCceEEeCCCCCCCCCCC--CCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEee
Q 003999 587 RKTERRAIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRW 664 (780)
Q Consensus 587 ~~a~~rlI~lD~DGTL~~~~~--~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~ 664 (780)
.++++++||+||||||+|+.+ ....++++++++|++|+++ ..|+|+|||++..+.++++ +++++++++||++++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~--~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKC--FPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcC--CCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 567889999999999998753 3457899999999999974 6899999999999999997 4689999999999987
Q ss_pred CC-CCceEe----cCCCcChhHHHHHHHHHHHHH---hcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhc
Q 003999 665 NK-TSEWET----NHLGADLEWKKIVEPVMRSYT---EATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLA 736 (780)
Q Consensus 665 ~~-~~~w~~----~~~~~d~~wk~~v~~i~~~~~---e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~ 736 (780)
++ +..|+. .....+.+|.+.+.++++.+. +++||+++|.|..+++||||+++++ ++.++.+++.+++.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 64 335641 111235578888888877654 6799999999999999999999765 33567788888887
Q ss_pred CCC-eEEEEcCeEEEEEeC-CCCHHHHHHHHHHHcCCCCC----ccccCC
Q 003999 737 NEP-AVVKRGQHIVEVKPQ-VLRPSSISVSLSLSVCVRAR----ACKLDD 780 (780)
Q Consensus 737 ~~~-v~v~~g~~~vEI~p~-gvsKG~al~~Ll~~l~i~~~----~~~~~~ 780 (780)
+.+ +.+..|++.+||+|. ++|||.|+++|++.++..-. -+++||
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGD 296 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGD 296 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcC
Confidence 766 789999999999995 99999999999999887643 366665
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-23 Score=246.66 Aligned_cols=319 Identities=15% Similarity=0.151 Sum_probs=215.9
Q ss_pred HHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCCccchHHHHHHHh-----cCCCcEEEEEeCC-----CCChhHhhc--CC
Q 003999 177 WQAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKR-----FNRIKLGFFLHSP-----FPSSEIYRT--LP 243 (780)
Q Consensus 177 w~~Y~~vN~~fA~~v~~~-~~~~~DiVwvhDyhl~llp~~lr~~-----~~~~~i~~flH~P-----fP~~e~~~~--lp 243 (780)
...|.-+.+..++.+... .+| ||||+||||..++|.++.+. +.++++.|++|.- ||.. .+.. +|
T Consensus 590 ~~RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~-~l~~lGL~ 666 (977)
T PLN02939 590 FKRFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPAS-DLASCGLD 666 (977)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHH-HHHHcCCC
Confidence 344554445555444332 244 89999999999985554432 4568999999965 3322 2221 22
Q ss_pred Ch---------------HHHH-HhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCC
Q 003999 244 VR---------------DEIL-RGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVH 307 (780)
Q Consensus 244 ~r---------------~eil-~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId 307 (780)
+. --++ .|+..||.|..-++.|++.-++ ..--|++. .+..+..++.++|+|||
T Consensus 667 ~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGID 735 (977)
T PLN02939 667 VHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGID 735 (977)
T ss_pred HHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEeccee
Confidence 11 1122 4677899999999999988664 11111111 12234567889999999
Q ss_pred chhhhhhcCC-----------chhHHHHHHHHHHcC------CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCce
Q 003999 308 MGRLESVLNL-----------PATATKIKEIEKQFD------GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKV 370 (780)
Q Consensus 308 ~~~~~~~~~~-----------~~~~~~~~~lr~~~~------~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~v 370 (780)
.+.|.+.... .........+++++. +.++|++|||+++.||+..+++|+.++++ ++.
T Consensus 736 ~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~dv---- 809 (977)
T PLN02939 736 TDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LGG---- 809 (977)
T ss_pred hhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cCC----
Confidence 9988764210 001122355778872 35899999999999999999999998875 343
Q ss_pred EEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhh
Q 003999 371 VLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKY 450 (780)
Q Consensus 371 vLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea 450 (780)
.||++|. |++ ..++.++..++.+++.. ..|.|+ +.++..+...+|+.||+||+||.+|||||+++||
T Consensus 810 qLVIvGd-----Gp~-~~~e~eL~~La~~l~l~------drV~Fl-G~~de~lah~IYAaADIFLmPSr~EPfGLvqLEA 876 (977)
T PLN02939 810 QFVLLGS-----SPV-PHIQREFEGIADQFQSN------NNIRLI-LKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIA 876 (977)
T ss_pred EEEEEeC-----CCc-HHHHHHHHHHHHHcCCC------CeEEEE-eccCHHHHHHHHHhCCEEEECCCccCCcHHHHHH
Confidence 4777773 322 13455667777665321 136654 4567777789999999999999999999999999
Q ss_pred hhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C-----------CcEEECCCCHHHHHHHHHHHHcC---CHH
Q 003999 451 IVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S-----------GAIRVNPWDIDAVADAMTLAINM---RDS 515 (780)
Q Consensus 451 ~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~-----------~al~VnP~d~~~~A~ai~~aL~m---~~~ 515 (780)
|+|| .|+|++..+|+.+.+ + +|++++|.|+++++++|.+++.. .++
T Consensus 877 MAyG-------------------tPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe 937 (977)
T PLN02939 877 MRYG-------------------SVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPE 937 (977)
T ss_pred HHCC-------------------CCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHH
Confidence 9996 478899999988766 1 48999999999999999999862 333
Q ss_pred HHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHHHH
Q 003999 516 EKQLRHEKHYRYVSTHDVAYWARSFAQDLERACR 549 (780)
Q Consensus 516 er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~~~ 549 (780)
.++.+.++. ....++|...++.+++-..++..
T Consensus 938 ~~~~L~~~a--m~~dFSWe~~A~qYeeLY~~ll~ 969 (977)
T PLN02939 938 VWKQLVQKD--MNIDFSWDSSASQYEELYQRAVA 969 (977)
T ss_pred HHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHH
Confidence 333322222 23678999999998877766543
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=235.76 Aligned_cols=188 Identities=21% Similarity=0.258 Sum_probs=151.1
Q ss_pred HHHhccCceEEeCCCCCCCCCCC-CC-CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEE
Q 003999 585 AYRKTERRAIFLDYDGTVVPETS-II-KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFI 662 (780)
Q Consensus 585 ~y~~a~~rlI~lD~DGTL~~~~~-~~-~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~i 662 (780)
++.+.++++||+||||||+|+.. .+ ..++++++++|++|++ ++.|+|+|||++..+.++++. .+++++++||+++
T Consensus 105 ~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La~--~~~vaIvSGR~~~~l~~~~~l-~~l~l~g~hGa~i 181 (366)
T PLN03017 105 EASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAK--CFPTAIVTGRCIDKVYNFVKL-AELYYAGSHGMDI 181 (366)
T ss_pred HHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHhc--CCcEEEEeCCCHHHHHHhhcc-cCceEEEcCCcEE
Confidence 34566889999999999998664 23 3799999999999994 689999999999999999754 5789999999999
Q ss_pred eeCCCCceEe-------cCCCcChhHHHHHHHH---HHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHH
Q 003999 663 RWNKTSEWET-------NHLGADLEWKKIVEPV---MRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLE 732 (780)
Q Consensus 663 r~~~~~~w~~-------~~~~~d~~wk~~v~~i---~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~ 732 (780)
+.+.+ .|.. .......+|++.+.++ ++.+++++||++||+|..+++||||++|++ .+.++..++.
T Consensus 182 ~~p~~-~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~----~~~~l~~~~~ 256 (366)
T PLN03017 182 KGPAK-GFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEK----KWSELVLQVR 256 (366)
T ss_pred ecCCC-cceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHH----HHHHHHHHHH
Confidence 97643 3321 0011234577777777 455677899999999999999999999764 3467778888
Q ss_pred HHhcCCC-eEEEEcCeEEEEEeC-CCCHHHHHHHHHHHcCCCCC----ccccCC
Q 003999 733 SVLANEP-AVVKRGQHIVEVKPQ-VLRPSSISVSLSLSVCVRAR----ACKLDD 780 (780)
Q Consensus 733 ~~l~~~~-v~v~~g~~~vEI~p~-gvsKG~al~~Ll~~l~i~~~----~~~~~~ 780 (780)
.++++.+ +.+..|+..+||+|. ++|||.|+++|++.++.... -+++||
T Consensus 257 ~vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGD 310 (366)
T PLN03017 257 SVLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGD 310 (366)
T ss_pred HHHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCC
Confidence 8888776 789999999999995 99999999999999987643 466665
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.2e-24 Score=242.20 Aligned_cols=294 Identities=19% Similarity=0.228 Sum_probs=199.2
Q ss_pred CCEEEEeCCccchHHHHHHHhc----CCCcEEEEEeCCCC----ChhHhhcC--CC-------------hHHHHHhhhcC
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRF----NRIKLGFFLHSPFP----SSEIYRTL--PV-------------RDEILRGLLNC 255 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~----~~~~i~~flH~PfP----~~e~~~~l--p~-------------r~eil~~ll~~ 255 (780)
-|+||.||||-.++|.++++++ .+++++++.|..-. ..+.+..+ |. ..-+-.++..|
T Consensus 119 pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 198 (466)
T PRK00654 119 PDIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYA 198 (466)
T ss_pred CceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhc
Confidence 3999999999999999998763 46899999998621 11111111 10 01122346678
Q ss_pred CEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEE--EcCeEEEEEEeecCCCchhhhhhcCC-----------chhHH
Q 003999 256 DLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD--YFGRTVYIKILPVGVHMGRLESVLNL-----------PATAT 322 (780)
Q Consensus 256 Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~--~~gr~~~i~i~P~GId~~~~~~~~~~-----------~~~~~ 322 (780)
|.|...+..|++..... ..|. +++ +..+..++.++|+|||.+.|.+.... ....+
T Consensus 199 d~vitvS~~~~~ei~~~---~~~~---------gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~ 266 (466)
T PRK00654 199 DRVTTVSPTYAREITTP---EFGY---------GLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAE 266 (466)
T ss_pred CcCeeeCHHHHHHhccc---cCCc---------ChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHH
Confidence 88877777766544320 0000 000 11134478899999999988753210 01112
Q ss_pred HHHHHHHHcC----CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHH
Q 003999 323 KIKEIEKQFD----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAK 398 (780)
Q Consensus 323 ~~~~lr~~~~----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~ 398 (780)
..+.+++++. +.++|++|||+++.||+..+++|+++++++ + +.|+.+|. |+ ..++++++++++
T Consensus 267 ~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~-----g~--~~~~~~l~~l~~ 333 (466)
T PRK00654 267 NKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGT-----GD--PELEEAFRALAA 333 (466)
T ss_pred HHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEec-----Cc--HHHHHHHHHHHH
Confidence 2345777772 578999999999999999999999998754 3 34777763 22 124456666665
Q ss_pred HHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEE
Q 003999 399 RINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVV 478 (780)
Q Consensus 399 ~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~ 478 (780)
+.+. .|.++.+. +.+....+|+.||++|+||.+||||++.+|||+|| .|+|+
T Consensus 334 ~~~~--------~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G-------------------~p~V~ 385 (466)
T PRK00654 334 RYPG--------KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYG-------------------TLPIV 385 (466)
T ss_pred HCCC--------cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCC-------------------CCEEE
Confidence 5431 25555443 55667799999999999999999999999999996 48899
Q ss_pred cCCCCccccC-CC--------cEEECCCCHHHHHHHHHHHHcCC--HHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHH
Q 003999 479 SEFIGCSPSL-SG--------AIRVNPWDIDAVADAMTLAINMR--DSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 479 Se~~G~~~~l-~~--------al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
|..+|+.+.+ ++ |++|+|.|+++++++|.++++.. ++.++.+.++.. ...+++..-++++++-.+++
T Consensus 386 ~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 386 RRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred eCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 9999999887 33 89999999999999999998732 222222222222 25688888888887666554
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-23 Score=232.22 Aligned_cols=269 Identities=19% Similarity=0.272 Sum_probs=199.9
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhC
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLG 278 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~ 278 (780)
.|+|+||+.. .+...+++++|++++.+.+|..|. ++. + -.++.|.+.+. +.+.++.. .+
T Consensus 100 ~~vi~v~~~~--~~~~~~~~~~~~~~~v~~~h~~~~-~~~----------~---~~~~~ii~~S~-~~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNSM--KLYRQIRERAPQAKLVMHMHNAFE-PEL----------L---DKNAKIIVPSQ-FLKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCcH--HhHHHHHhhCCCCCEEEEEecccC-hhH----------h---ccCCEEEEcCH-HHHHHHHh---hC-
Confidence 5999999843 344667888999999999998763 111 1 13577776665 33333321 01
Q ss_pred ceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCChHHHHHH
Q 003999 279 LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGISLKLLA 355 (780)
Q Consensus 279 ~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KGi~~~l~A 355 (780)
...++.++|+|||...|.+.. ...+++++ +++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 112468899999988876421 12234444 367899999999999999999999
Q ss_pred HHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceee
Q 003999 356 MEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCI 435 (780)
Q Consensus 356 ~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 435 (780)
+.++.+++|+++ |+++|.+......+..++++++.+++.+++. .|+ +.+.++.+++.++|+.||++|
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~--------~v~-~~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIGD--------RCI-MLGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcCC--------cEE-EeCCCCHHHHHHHHHhCCEEE
Confidence 999999999876 8888865432222334566677777665532 255 456789999999999999999
Q ss_pred eccC-CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcE-EECCCCHHHHHHHHHHHH
Q 003999 436 VNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAI-RVNPWDIDAVADAMTLAI 510 (780)
Q Consensus 436 vtS~-rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al-~VnP~d~~~~A~ai~~aL 510 (780)
+||. .||||++++|||||| .|+|+|..+|..+.+ + .|+ +++|.|++++|++|.+++
T Consensus 282 ~pS~~~E~f~~~~lEAma~G-------------------~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll 342 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAAG-------------------KPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL 342 (380)
T ss_pred eCCCCccccccHHHHHHHcC-------------------CCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH
Confidence 9997 599999999999997 489999998888877 3 365 678999999999999999
Q ss_pred cCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHH
Q 003999 511 NMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLER 546 (780)
Q Consensus 511 ~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~ 546 (780)
++++ +..+.++.++++ .++++..-++++++.++.
T Consensus 343 ~d~~--~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 343 ADPE--LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred cCHH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 9875 344556677665 668999999998887764
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-23 Score=248.42 Aligned_cols=308 Identities=13% Similarity=0.096 Sum_probs=217.9
Q ss_pred hHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCCccchHHHHHHHh-----cCCCcEEEEEeCCCCChhHhhcCCChHHHH
Q 003999 176 LWQAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKR-----FNRIKLGFFLHSPFPSSEIYRTLPVRDEIL 249 (780)
Q Consensus 176 ~w~~Y~~vN~~fA~~v~~~-~~~~~DiVwvhDyhl~llp~~lr~~-----~~~~~i~~flH~PfP~~e~~~~lp~r~eil 249 (780)
+...|.-+++..++.+... .+| ||||+||+|-.++|.++++. +.+++++++.|..-- ....+-
T Consensus 688 d~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~~---------~~n~lk 756 (1036)
T PLN02316 688 DGERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF---------GANHIG 756 (1036)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCccc---------chhHHH
Confidence 3455555566665554432 234 99999999999999999875 356899999996421 112234
Q ss_pred HhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCC--c-----h---
Q 003999 250 RGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNL--P-----A--- 319 (780)
Q Consensus 250 ~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~--~-----~--- 319 (780)
.++..||.|.-.+..|++..+.. ..+ ..+..++.++|+|||++.|.+.... | +
T Consensus 757 ~~l~~AD~ViTVS~tya~EI~~~----~~l-------------~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~ 819 (1036)
T PLN02316 757 KAMAYADKATTVSPTYSREVSGN----SAI-------------APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVV 819 (1036)
T ss_pred HHHHHCCEEEeCCHHHHHHHHhc----cCc-------------ccccCCEEEEECCccccccCCcccccccccCCchhhh
Confidence 56778999999999888776531 000 1123468899999999987653210 0 0
Q ss_pred --hHHHHHHHHHHcC----CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHH
Q 003999 320 --TATKIKEIEKQFD----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKET 393 (780)
Q Consensus 320 --~~~~~~~lr~~~~----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei 393 (780)
.......+++++. +.++|++|+||++.||+..+++|+.++++. +. .||++|. |++ ..++.++
T Consensus 820 ~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~~----qlVIvG~-----Gpd-~~~e~~l 887 (1036)
T PLN02316 820 EGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--NG----QVVLLGS-----APD-PRIQNDF 887 (1036)
T ss_pred hhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--Cc----EEEEEeC-----CCC-HHHHHHH
Confidence 0122345777772 578999999999999999999999999863 33 3666663 333 2456677
Q ss_pred HHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCC
Q 003999 394 YLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHT 473 (780)
Q Consensus 394 ~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~ 473 (780)
.+++.+++..+.. .|.+.. ..+......+|++||+||+||..|||||+.+|||+||
T Consensus 888 ~~La~~Lg~~~~~----rV~f~g-~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~G------------------- 943 (1036)
T PLN02316 888 VNLANQLHSSHHD----RARLCL-TYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYG------------------- 943 (1036)
T ss_pred HHHHHHhCccCCC----eEEEEe-cCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcC-------------------
Confidence 8888777544321 355543 3444333579999999999999999999999999996
Q ss_pred ceEEEcCCCCccccC-C---------------CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHH
Q 003999 474 SMLVVSEFIGCSPSL-S---------------GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYW 536 (780)
Q Consensus 474 g~lV~Se~~G~~~~l-~---------------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~W 536 (780)
.|+|+|..+|..+.+ + +|++|+|.|++++++||.++|......+....+..++.+ ..++|..-
T Consensus 944 tppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~ 1023 (1036)
T PLN02316 944 SIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRP 1023 (1036)
T ss_pred CCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHH
Confidence 478889999999887 2 389999999999999999999875322222233344444 45899998
Q ss_pred HHHHHHHHHHH
Q 003999 537 ARSFAQDLERA 547 (780)
Q Consensus 537 a~~~l~~l~~~ 547 (780)
|+.+++-.+++
T Consensus 1024 A~~Y~~LY~~a 1034 (1036)
T PLN02316 1024 ALDYMELYHSA 1034 (1036)
T ss_pred HHHHHHHHHHH
Confidence 99888766654
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-23 Score=236.45 Aligned_cols=297 Identities=16% Similarity=0.106 Sum_probs=189.6
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChh--Hhh------------cCCChHHH-HHhhhcCCEEEeecH
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE--IYR------------TLPVRDEI-LRGLLNCDLIGFHTF 263 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e--~~~------------~lp~r~ei-l~~ll~~Dligf~t~ 263 (780)
-|+||+|+++..++..++++.. ++|++++.|....... +.. .++.+-.+ ...+..+|.|...+.
T Consensus 115 ~DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~ 193 (439)
T TIGR02472 115 PDLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQYNISRRIEAEEETLAHASLVITSTH 193 (439)
T ss_pred CCEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhcchHHHHHHHHHHHHhCCEEEECCH
Confidence 3999999988777777776654 6799999997532210 000 00111001 122345676665554
Q ss_pred HHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--CCCeEEEEec
Q 003999 264 DYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGID 341 (780)
Q Consensus 264 ~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~--~~~~vil~Vd 341 (780)
..++.-+. ...+ -...++.++|+|||++.|.+....++.......+++.. +++++|++||
T Consensus 194 ~~~~~~~~---~~~~---------------~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vG 255 (439)
T TIGR02472 194 QEIEEQYA---LYDS---------------YQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEKPPILAIS 255 (439)
T ss_pred HHHHHHHH---hccC---------------CCccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCCcEEEEEc
Confidence 32221110 0001 12346889999999999875422111111112222222 4678999999
Q ss_pred cccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEc-CCCCChhH-HHHHHHHHHHHHHHHhhccCCCCcccEEEecCCC
Q 003999 342 DMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVN-PARGSGKD-VQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419 (780)
Q Consensus 342 rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~-p~r~~~~~-~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v 419 (780)
|+++.||+..+++||.++.+..+.. ++++ .+|. +.+..... ..++.+++..+++++ +-.+ .|. +.+.+
T Consensus 256 rl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~~~~~l~~~~~~~~~~~~~~~~~~----~l~~--~V~-f~g~~ 325 (439)
T TIGR02472 256 RPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRDDIRKMESQQREVLQKVLLLIDRY----DLYG--KVA-YPKHH 325 (439)
T ss_pred CCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCccccccccHHHHHHHHHHHHHHHHc----CCCc--eEE-ecCCC
Confidence 9999999999999998642211111 2333 2332 11111100 111223344444443 2222 255 56788
Q ss_pred CHHHHHHHHHhc----ceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcE
Q 003999 420 PRFEKSAYYAVA----ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAI 492 (780)
Q Consensus 420 ~~~el~aly~~A----Dv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al 492 (780)
+.+++.++|+.| |+||+||.+||||++++|||||| .|+|+|..+|+.+.+. +|+
T Consensus 326 ~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G-------------------~PvV~s~~gg~~eiv~~~~~G~ 386 (439)
T TIGR02472 326 RPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACG-------------------LPIVATDDGGPRDIIANCRNGL 386 (439)
T ss_pred CHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhC-------------------CCEEEeCCCCcHHHhcCCCcEE
Confidence 999999999988 99999999999999999999997 4899999999988873 489
Q ss_pred EECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhh-hCCHHHHHHHHHHHH
Q 003999 493 RVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWARSFAQDL 544 (780)
Q Consensus 493 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~-~~~~~~Wa~~~l~~l 544 (780)
+|+|.|++++|++|.+++++++ +++...++.++++. .+++..-++.+++-|
T Consensus 387 lv~~~d~~~la~~i~~ll~~~~-~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 387 LVDVLDLEAIASALEDALSDSS-QWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred EeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999999999999998754 56666677787774 588888888776543
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.3e-23 Score=237.18 Aligned_cols=320 Identities=15% Similarity=0.151 Sum_probs=215.1
Q ss_pred HhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCCccchHHHHHHHhc------CCCcEEEEEeCCC-----CChhHhhcC
Q 003999 175 VLWQAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKRF------NRIKLGFFLHSPF-----PSSEIYRTL 242 (780)
Q Consensus 175 ~~w~~Y~~vN~~fA~~v~~~-~~~~~DiVwvhDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~~~~l 242 (780)
+....|.-.++..++.+.+. ++| |+||+||||-.++|.+++++. .++|++++.|... |...+-..+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 34566776677766665432 345 899999999999999998764 4789999999853 211111113
Q ss_pred CCh------------HHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchh
Q 003999 243 PVR------------DEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGR 310 (780)
Q Consensus 243 p~r------------~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~ 310 (780)
|+. .-+-.++..||.|...++.|++.-.+....-.|++. ....+..++.++|+|||.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---------~l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---------VLEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---------HHHhcCCCeeEEeCCccccc
Confidence 311 112235678899888888887764320000011110 00112457889999999998
Q ss_pred hhhhcCCc-----------hhHHHHHHHHHHc-----CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEE
Q 003999 311 LESVLNLP-----------ATATKIKEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (780)
Q Consensus 311 ~~~~~~~~-----------~~~~~~~~lr~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (780)
|.+..... ........+++++ +++++|++|+|+++.||+..+++|+.++++. + +.|++
T Consensus 268 ~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvi 341 (489)
T PRK14098 268 WNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVI 341 (489)
T ss_pred cCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEE
Confidence 87532100 0011234566665 2568999999999999999999999998752 3 44887
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcc
Q 003999 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 375 i~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
+|. |+. .+++++++++++. +. .|.+. +.++.+++..+|+.||+||+||..||||++.+|||+||
T Consensus 342 vG~-----G~~--~~~~~l~~l~~~~----~~----~V~~~-g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G 405 (489)
T PRK14098 342 CGS-----GDK--EYEKRFQDFAEEH----PE----QVSVQ-TEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYG 405 (489)
T ss_pred EeC-----CCH--HHHHHHHHHHHHC----CC----CEEEE-EecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCC
Confidence 873 221 2445666666553 21 26544 46788899999999999999999999999999999996
Q ss_pred cCCCccccccccCCCCCCCceEEEcCCCCccccCC-------CcEEECCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHhh
Q 003999 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-------GAIRVNPWDIDAVADAMTLAINMR-DSEKQLRHEKHYR 526 (780)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-------~al~VnP~d~~~~A~ai~~aL~m~-~~er~~r~~~~~~ 526 (780)
.|+|++..+|+.+.+. +|++++|.|++++|++|.+++.+- ..++..++.+ ..
T Consensus 406 -------------------~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~-~~ 465 (489)
T PRK14098 406 -------------------TIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVL-EA 465 (489)
T ss_pred -------------------CCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH-HH
Confidence 4788899999887762 489999999999999999987431 1122222211 11
Q ss_pred HhhhCCHHHHHHHHHHHHHHH
Q 003999 527 YVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 527 ~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
..+.+++..-++.+++-.+++
T Consensus 466 ~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 466 MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred hcCCCChHHHHHHHHHHHHHH
Confidence 235688888888887666554
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-22 Score=233.03 Aligned_cols=292 Identities=18% Similarity=0.221 Sum_probs=201.0
Q ss_pred CCEEEEeCCccchHHHHHHHhcC--CCcEEEEEeCCCC----ChhHhhcCCCh--------------HH-HHHhhhcCCE
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFN--RIKLGFFLHSPFP----SSEIYRTLPVR--------------DE-ILRGLLNCDL 257 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~--~~~i~~flH~PfP----~~e~~~~lp~r--------------~e-il~~ll~~Dl 257 (780)
-|+||.||+|..++|.++++... ++|++++.|...+ +.+.+..+... -. +-.++..||.
T Consensus 129 ~DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 208 (473)
T TIGR02095 129 PDVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADR 208 (473)
T ss_pred CCEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCc
Confidence 39999999999999999988765 3899999998642 12222222111 01 1234566788
Q ss_pred EEeecHHHHHHHHHHHHhhhCceeccCCceeEEE--EcCeEEEEEEeecCCCchhhhhhcCCc-----------hhHHHH
Q 003999 258 IGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD--YFGRTVYIKILPVGVHMGRLESVLNLP-----------ATATKI 324 (780)
Q Consensus 258 igf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~--~~gr~~~i~i~P~GId~~~~~~~~~~~-----------~~~~~~ 324 (780)
|...+..|++..... ..|. +++ +..+..++.++|+|||.+.|.+..... ......
T Consensus 209 v~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k 276 (473)
T TIGR02095 209 VTTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENK 276 (473)
T ss_pred CeecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhH
Confidence 777777776655421 0000 010 011345788999999999887532100 011223
Q ss_pred HHHHHHcC-----CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHH
Q 003999 325 KEIEKQFD-----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKR 399 (780)
Q Consensus 325 ~~lr~~~~-----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~ 399 (780)
..+++++. ++++|++|||+.+.||+..+++|++++.++. +.|+.+|. |+ .++++++++++.+
T Consensus 277 ~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~-----g~--~~~~~~l~~~~~~ 343 (473)
T TIGR02095 277 EALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGT-----GD--PELEEALRELAER 343 (473)
T ss_pred HHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECC-----CC--HHHHHHHHHHHHH
Confidence 45777772 6789999999999999999999999987542 44777763 22 2344566666644
Q ss_pred HhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc
Q 003999 400 INEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479 (780)
Q Consensus 400 In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S 479 (780)
. +. .+.++. ..+.+++..+|+.||++++||..||||++.+|||+|| .|+|+|
T Consensus 344 ~----~~----~v~~~~-~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G-------------------~pvI~s 395 (473)
T TIGR02095 344 Y----PG----NVRVII-GYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYG-------------------TVPIVR 395 (473)
T ss_pred C----CC----cEEEEE-cCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCC-------------------CCeEEc
Confidence 3 21 255443 4678888999999999999999999999999999997 489999
Q ss_pred CCCCccccC-C--------CcEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHH
Q 003999 480 EFIGCSPSL-S--------GAIRVNPWDIDAVADAMTLAINM---RDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (780)
Q Consensus 480 e~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~ 545 (780)
..+|..+.+ + .|++++|.|++++|++|.+++.+ .++.++.+.++.. .+.+++..-++.+++-.+
T Consensus 396 ~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 396 RTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM--SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred cCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCcHHHHHHHHHHHH
Confidence 999999888 3 38999999999999999999973 2222333222222 256888888888776544
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-22 Score=231.81 Aligned_cols=294 Identities=19% Similarity=0.171 Sum_probs=193.8
Q ss_pred CEEEEeCCccchHHHHHHHh-cCCCcEEEEEeCC-----CCChhHhhc--CCCh-------------HHHHHhhhcCCEE
Q 003999 200 DCVWVHDYHLMVLPTFLRKR-FNRIKLGFFLHSP-----FPSSEIYRT--LPVR-------------DEILRGLLNCDLI 258 (780)
Q Consensus 200 DiVwvhDyhl~llp~~lr~~-~~~~~i~~flH~P-----fP~~e~~~~--lp~r-------------~eil~~ll~~Dli 258 (780)
||||+||||..++|.+++.+ ..+++++++.|.. ||. ..+.. +|.. .-+-.++..||.|
T Consensus 135 DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~~ad~v 213 (485)
T PRK14099 135 DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRI 213 (485)
T ss_pred CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHHhcCee
Confidence 99999999999999998753 2467899999975 321 11111 1110 0123345667877
Q ss_pred EeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCc-----------hhHHHHHHH
Q 003999 259 GFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLP-----------ATATKIKEI 327 (780)
Q Consensus 259 gf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~-----------~~~~~~~~l 327 (780)
.-.+..|++...+.- .-.|++. .+..+..++.++|+|||.+.|.+..... ........+
T Consensus 214 itVS~~~a~ei~~~~-~g~gl~~---------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l 283 (485)
T PRK14099 214 TTVSPTYALEIQGPE-AGMGLDG---------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAAL 283 (485)
T ss_pred eecChhHHHHHhccc-CCcChHH---------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHH
Confidence 777776665543210 0001000 0011244788999999999887532100 001123456
Q ss_pred HHHcC-----CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhh
Q 003999 328 EKQFD-----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINE 402 (780)
Q Consensus 328 r~~~~-----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~ 402 (780)
++++. +.+++++|+|+++.||+..+++|+++++++ + +.||++|. |+ .++++++++++++.
T Consensus 284 ~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~~~~-- 348 (485)
T PRK14099 284 QARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAAQAY-- 348 (485)
T ss_pred HHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHHHHC--
Confidence 67762 356888899999999999999999998753 3 34777773 22 13445566665442
Q ss_pred ccCCCCcccEEEecCCCCHHHHHHHH-HhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCC
Q 003999 403 VYGSPNYEPVVLIDRPVPRFEKSAYY-AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF 481 (780)
Q Consensus 403 ~~g~~~~~pV~~~~~~v~~~el~aly-~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (780)
+. .++++.+. .+++..+| +.||+||+||.+||||++.+|||+|| .|+|+|..
T Consensus 349 --~~----~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G-------------------~ppVvs~~ 401 (485)
T PRK14099 349 --PG----QIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRYG-------------------AVPVVARV 401 (485)
T ss_pred --CC----CEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHCC-------------------CCcEEeCC
Confidence 21 25444454 57888877 57999999999999999999999996 36777998
Q ss_pred CCccccC-C-----------CcEEECCCCHHHHHHHHHHH---HcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHH
Q 003999 482 IGCSPSL-S-----------GAIRVNPWDIDAVADAMTLA---INMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (780)
Q Consensus 482 ~G~~~~l-~-----------~al~VnP~d~~~~A~ai~~a---L~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~ 546 (780)
+|..+.+ + .|++|+|.|++++|++|.++ ++.+ +.++...++.+ .+.++|..-++.+++-.++
T Consensus 402 GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~-~~~~~l~~~~~--~~~fSw~~~a~~y~~lY~~ 478 (485)
T PRK14099 402 GGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADP-VAWRRLQRNGM--TTDVSWRNPAQHYAALYRS 478 (485)
T ss_pred CCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCH-HHHHHHHHHhh--hhcCChHHHHHHHHHHHHH
Confidence 8988876 2 38999999999999999985 4333 23333333332 3678888888888877766
Q ss_pred HHH
Q 003999 547 ACR 549 (780)
Q Consensus 547 ~~~ 549 (780)
+..
T Consensus 479 l~~ 481 (485)
T PRK14099 479 LVA 481 (485)
T ss_pred HHh
Confidence 543
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.5e-22 Score=222.83 Aligned_cols=287 Identities=17% Similarity=0.152 Sum_probs=208.3
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhc---CCC--hHHHH--HhhhcCCEEEeecHHHHHHHHH
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRT---LPV--RDEIL--RGLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~---lp~--r~eil--~~ll~~Dligf~t~~y~~~Fl~ 271 (780)
.|+|++|++....++.++++. .++|+++++|..++-...+.. .|. ...++ ..+-.+|.+.+.+...++.+..
T Consensus 102 ~Diih~h~~~~~~~~~~~~~~-~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~ 180 (405)
T TIGR03449 102 YDLIHSHYWLSGQVGWLLRDR-WGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVR 180 (405)
T ss_pred CCeEEechHHHHHHHHHHHHh-cCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHH
Confidence 499999997666666666554 468899999975421111110 111 11222 1345789999999987777753
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCC
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKG 348 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KG 348 (780)
. .+. ...++.++|+|||.+.|.+. + ....++++ .++++|+++||+.+.||
T Consensus 181 ~----~~~---------------~~~ki~vi~ngvd~~~~~~~----~----~~~~~~~~~~~~~~~~i~~~G~l~~~K~ 233 (405)
T TIGR03449 181 H----YDA---------------DPDRIDVVAPGADLERFRPG----D----RATERARLGLPLDTKVVAFVGRIQPLKA 233 (405)
T ss_pred H----cCC---------------ChhhEEEECCCcCHHHcCCC----c----HHHHHHhcCCCCCCcEEEEecCCCcccC
Confidence 2 121 23467889999999887542 1 12234455 36789999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCCh-hHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHH
Q 003999 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSG-KDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAY 427 (780)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~-~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~al 427 (780)
+..+++|++++++++|+. ++.|+++|.+.. ++ +.. .++++++++.+.. ..|. +.+.++.+++..+
T Consensus 234 ~~~li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~----~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~ 299 (405)
T TIGR03449 234 PDVLLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATP----DALIELAAELGIA------DRVR-FLPPRPPEELVHV 299 (405)
T ss_pred HHHHHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHH----HHHHHHHHHcCCC------ceEE-ECCCCCHHHHHHH
Confidence 999999999999988873 466888886442 23 332 3344555444321 1255 5578999999999
Q ss_pred HHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHH
Q 003999 428 YAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVAD 504 (780)
Q Consensus 428 y~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ 504 (780)
|+.||++++||..||||++++|||+|| .|+|+|..+|..+.+. .|++++|.|++++|+
T Consensus 300 l~~ad~~v~ps~~E~~g~~~lEAma~G-------------------~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~ 360 (405)
T TIGR03449 300 YRAADVVAVPSYNESFGLVAMEAQACG-------------------TPVVAARVGGLPVAVADGETGLLVDGHDPADWAD 360 (405)
T ss_pred HHhCCEEEECCCCCCcChHHHHHHHcC-------------------CCEEEecCCCcHhhhccCCceEECCCCCHHHHHH
Confidence 999999999999999999999999997 4889999988887773 389999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHH
Q 003999 505 AMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 505 ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
+|.++++.++ ++....+..++++..+++...++.+++-+.++
T Consensus 361 ~i~~~l~~~~-~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 361 ALARLLDDPR-TRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHHhCHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999998653 45555566777888899999999888766653
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-22 Score=224.08 Aligned_cols=288 Identities=15% Similarity=0.150 Sum_probs=195.3
Q ss_pred HcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCC--hhH-hh-cCCCh--------HH---HHHhhhcCCEE
Q 003999 194 VINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPS--SEI-YR-TLPVR--------DE---ILRGLLNCDLI 258 (780)
Q Consensus 194 ~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~--~e~-~~-~lp~r--------~e---il~~ll~~Dli 258 (780)
.++| |+|+.|. .+....++++.+|+++++.+.|..+-. .+. |. ..+.+ .. ....+-.+|.+
T Consensus 85 ~~~p--dvi~~h~--~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 160 (396)
T cd03818 85 GFRP--DVIVAHP--GWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAG 160 (396)
T ss_pred CCCC--CEEEECC--ccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEE
Confidence 3455 8999994 556666899999999998777643311 110 10 11111 11 22446678888
Q ss_pred EeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCe
Q 003999 259 GFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKK 335 (780)
Q Consensus 259 gf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~ 335 (780)
...+......|.+ .. ..++.++|+|||.+.|.+... . ...++... ++++
T Consensus 161 i~~s~~~~~~~~~--------------------~~--~~ki~vI~ngvd~~~f~~~~~---~---~~~~~~~~~~~~~~~ 212 (396)
T cd03818 161 VSPTRWQRSTFPA--------------------EL--RSRISVIHDGIDTDRLRPDPQ---A---RLRLPNGRVLTPGDE 212 (396)
T ss_pred ECCCHHHHhhCcH--------------------hh--ccceEEeCCCccccccCCCch---h---hhcccccccCCCCCe
Confidence 7776644433321 01 136889999999998875321 1 11122221 4678
Q ss_pred EEEEecc-ccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 003999 336 LILGIDD-MDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVL 414 (780)
Q Consensus 336 vil~Vdr-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~ 414 (780)
+|++++| +.+.||+..+++|+.++.+++|+++ |+++|....+.+..........+++.++++.+.+. ..|+|
T Consensus 213 ~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~V~f 285 (396)
T cd03818 213 VITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDL---SRVHF 285 (396)
T ss_pred EEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCc---ceEEE
Confidence 9999998 9999999999999999999999877 88888532111100000000112223333322121 23664
Q ss_pred ecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---Cc
Q 003999 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GA 491 (780)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~a 491 (780)
.|.++.+++.++|+.||++++||..||+|++++|||||| .|+|+|..+|..+.+. .|
T Consensus 286 -~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G-------------------~PVIas~~~g~~e~i~~~~~G 345 (396)
T cd03818 286 -LGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACG-------------------CLVVGSDTAPVREVITDGENG 345 (396)
T ss_pred -eCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCC-------------------CCEEEcCCCCchhhcccCCce
Confidence 578999999999999999999999999999999999997 4899999988888883 48
Q ss_pred EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh-CCHHHHHHHHH
Q 003999 492 IRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFA 541 (780)
Q Consensus 492 l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~~~l 541 (780)
++++|.|++++|++|.+++++++ ++....++.++++.+ +++...+++++
T Consensus 346 ~lv~~~d~~~la~~i~~ll~~~~-~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 346 LLVDFFDPDALAAAVIELLDDPA-RRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred EEcCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 99999999999999999998764 566666778888877 77666666554
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.6e-22 Score=221.95 Aligned_cols=274 Identities=19% Similarity=0.124 Sum_probs=197.7
Q ss_pred CCEEEEeCCccchHHHHHHHh-cCCCcEEEEEeCCCCCh-hHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhh
Q 003999 199 DDCVWVHDYHLMVLPTFLRKR-FNRIKLGFFLHSPFPSS-EIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRM 276 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~-~~~~~i~~flH~PfP~~-e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~ 276 (780)
-|+|+.|..+.-.+..++++. ....++.+++|.+-... .+.. ..+..+-+.+-.+|.|...+....+.+.+
T Consensus 119 ~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~----- 191 (406)
T PRK15427 119 ADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK----- 191 (406)
T ss_pred CCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----
Confidence 499999988776666777763 22456788899753211 1110 11112223344689888777654443321
Q ss_pred hCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHH
Q 003999 277 LGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAM 356 (780)
Q Consensus 277 l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~ 356 (780)
+|. ...+|.++|+|||.+.|..... ....+...|++|||+.+.||+..+++|+
T Consensus 192 ~g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~ 244 (406)
T PRK15427 192 MGC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEAC 244 (406)
T ss_pred cCC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHHH
Confidence 121 1235788999999998854211 0123456799999999999999999999
Q ss_pred HHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeee
Q 003999 357 EQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIV 436 (780)
Q Consensus 357 ~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv 436 (780)
+.+.+++|+++ |+.+| +|+.. +++++++++.+. ...+.+.|.++.+|+.++|+.||+||+
T Consensus 245 ~~l~~~~~~~~----l~ivG-----~G~~~----~~l~~~~~~~~l-------~~~V~~~G~~~~~el~~~l~~aDv~v~ 304 (406)
T PRK15427 245 RQLKEQGVAFR----YRILG-----IGPWE----RRLRTLIEQYQL-------EDVVEMPGFKPSHEVKAMLDDADVFLL 304 (406)
T ss_pred HHHHhhCCCEE----EEEEE-----CchhH----HHHHHHHHHcCC-------CCeEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 99988888765 87777 34433 344555544321 123446689999999999999999999
Q ss_pred ccCC------cCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHHH
Q 003999 437 NAVR------DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMT 507 (780)
Q Consensus 437 tS~r------EGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~ 507 (780)
||.. |||+++.+|||||| .|+|+|..+|+.+.+. +|++|+|.|++++|++|.
T Consensus 305 pS~~~~~g~~Eg~p~~llEAma~G-------------------~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~ 365 (406)
T PRK15427 305 PSVTGADGDMEGIPVALMEAMAVG-------------------IPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLA 365 (406)
T ss_pred CCccCCCCCccCccHHHHHHHhCC-------------------CCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHH
Confidence 9984 99999999999997 4899999999988873 489999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHH
Q 003999 508 LAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLE 545 (780)
Q Consensus 508 ~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~ 545 (780)
+++++.+++++.+.++.++++ ..+++...++.+.+-++
T Consensus 366 ~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 366 AFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 999966666777777788887 45899988888776654
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-22 Score=214.02 Aligned_cols=180 Identities=18% Similarity=0.210 Sum_probs=142.0
Q ss_pred CceEEeCCCCCCCCCC--CCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCC
Q 003999 591 RRAIFLDYDGTVVPET--SIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTS 668 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~--~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~ 668 (780)
+++|++||||||++.. +.++.++++++++|++|++++|+.|+|+|||++..+.++++.+ .+.++++||++++..++
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~- 91 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDING- 91 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCC-
Confidence 6899999999999854 2356789999999999998779999999999999999999876 57799999999987654
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHH-HHhcCCC-eEEEEcC
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLE-SVLANEP-AVVKRGQ 746 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~-~~l~~~~-v~v~~g~ 746 (780)
.|.. ...+.+|.+.+...++.+.+++||+++|.|+.+++|||+.++ + .++.+..+. .+.+..+ +.+.+|+
T Consensus 92 ~~~~--~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~-~-----~~~~~~~l~~~i~~~~~~~~~~~g~ 163 (266)
T PRK10187 92 KTHI--VHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAP-Q-----HEDALLALAQRITQIWPQLALQPGK 163 (266)
T ss_pred Ceee--ccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCC-c-----cHHHHHHHHHHHHhhCCceEEeCCC
Confidence 3432 234556666677777777888999999999999999999873 2 123333333 2222333 6678899
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCCCCccc-cCC
Q 003999 747 HIVEVKPQVLRPSSISVSLSLSVCVRARACK-LDD 780 (780)
Q Consensus 747 ~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~-~~~ 780 (780)
.++||+|+|+|||.|+++|++.++++.+++. .||
T Consensus 164 ~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD 198 (266)
T PRK10187 164 CVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVFVGD 198 (266)
T ss_pred EEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEEEcC
Confidence 9999999999999999999999998875543 444
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-21 Score=219.65 Aligned_cols=280 Identities=15% Similarity=0.131 Sum_probs=197.2
Q ss_pred HcCCCCCEEEEeCCccchH-HHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHh-hhcCCEEEeecHHHHHHHHH
Q 003999 194 VINPDDDCVWVHDYHLMVL-PTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRG-LLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 194 ~~~~~~DiVwvhDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~-ll~~Dligf~t~~y~~~Fl~ 271 (780)
..+| |+|++|+++.... ...+-.+..++|++++.|..|+..+... .+...+.+. +-.+|.+.+.+....+++..
T Consensus 86 ~~~~--DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 161 (398)
T cd03796 86 RERI--TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASS--IHTNKLLRFSLADVDHVICVSHTSKENTVL 161 (398)
T ss_pred hcCC--CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhh--HHhhHHHHHhhccCCEEEEecHhHhhHHHH
Confidence 3355 9999999875543 2333334456899999998765332211 111223333 34688888888866555432
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHH
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISL 351 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~ 351 (780)
. .+ ....++.++|+|+|.+.|.+... . ..+++++|+++||+++.||+..
T Consensus 162 ~----~~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~~~ 210 (398)
T cd03796 162 R----AS---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGIDL 210 (398)
T ss_pred H----hC---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCHHH
Confidence 1 01 11346788999999988864211 0 1256789999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhc
Q 003999 352 KLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVA 431 (780)
Q Consensus 352 ~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~A 431 (780)
+++|+..+.+++|+++ |+.+|. ++..+ ++++++++. |..+ .|.+ .|.++.+++.++|+.|
T Consensus 211 li~a~~~l~~~~~~~~----l~i~G~-----g~~~~----~l~~~~~~~----~l~~--~v~~-~G~~~~~~~~~~l~~a 270 (398)
T cd03796 211 LVGIIPEICKKHPNVR----FIIGGD-----GPKRI----LLEEMREKY----NLQD--RVEL-LGAVPHERVRDVLVQG 270 (398)
T ss_pred HHHHHHHHHhhCCCEE----EEEEeC-----CchHH----HHHHHHHHh----CCCC--eEEE-eCCCCHHHHHHHHHhC
Confidence 9999999988888876 777763 33333 344444443 2211 2664 4789999999999999
Q ss_pred ceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-CC-cEEECCCCHHHHHHHHHHH
Q 003999 432 ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SG-AIRVNPWDIDAVADAMTLA 509 (780)
Q Consensus 432 Dv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~-al~VnP~d~~~~A~ai~~a 509 (780)
|++++||..||||++.+|||||| .|+|+|..+|..+.+ ++ +++++| |.++++++|.++
T Consensus 271 d~~v~pS~~E~~g~~~~EAma~G-------------------~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~~~ 330 (398)
T cd03796 271 HIFLNTSLTEAFCIAIVEAASCG-------------------LLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLEEA 330 (398)
T ss_pred CEEEeCChhhccCHHHHHHHHcC-------------------CCEEECCCCCchhheeCCceeecCC-CHHHHHHHHHHH
Confidence 99999999999999999999997 489999999988877 34 445555 999999999999
Q ss_pred HcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHHHHH
Q 003999 510 INMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLERACR 549 (780)
Q Consensus 510 L~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~~~~ 549 (780)
+.++.+.+ ...+..++.+ ..+++..-++++++.++++..
T Consensus 331 l~~~~~~~-~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 331 ISILRTGK-HDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred HhChhhhh-hHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 99765433 3344555544 568999999999888877643
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.1e-21 Score=225.47 Aligned_cols=337 Identities=11% Similarity=0.143 Sum_probs=209.4
Q ss_pred HhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCC----CChhH-hhcC------C
Q 003999 175 VLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPF----PSSEI-YRTL------P 243 (780)
Q Consensus 175 ~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~e~-~~~l------p 243 (780)
+.|..-..++...++.+.......-|+|+.|.+.--+++..++++. +++..++.|+.= +.+.. +... .
T Consensus 362 ~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~ 440 (784)
T TIGR02470 362 EIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFS 440 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHhh
Confidence 4676666666666666654433223999999888778888887765 688888888651 11111 0001 0
Q ss_pred Ch-HHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceec-cCCcee----EEEEcCeEEEEEEeecCCCchhhhhhcCC
Q 003999 244 VR-DEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYE-SKRGHI----GLDYFGRTVYIKILPVGVHMGRLESVLNL 317 (780)
Q Consensus 244 ~r-~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~-~~~g~~----~~~~~gr~~~i~i~P~GId~~~~~~~~~~ 317 (780)
.+ ..-+..|-.||.|.-.|+.-...-...+.. .+.... +-.+.. ++++. ..++.++|+|+|+..|.+....
T Consensus 441 ~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~q-Y~s~~~ft~p~Ly~vvnGid~~--~~Ki~VVpPGVD~~iF~P~~~~ 517 (784)
T TIGR02470 441 CQFTADLIAMNAADFIITSTYQEIAGTKDSVGQ-YESHQAFTMPGLYRVVHGIDVF--DPKFNIVSPGADESIYFPYSDK 517 (784)
T ss_pred hhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhh-hhhcccccccceeeeecCccCC--cCCeEEECCCcChhhcCCCCch
Confidence 01 001245667999988886432211111000 000000 000111 11111 2378999999999988764221
Q ss_pred chh-HHHH----------HHHHHHc-----CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCC
Q 003999 318 PAT-ATKI----------KEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARG 381 (780)
Q Consensus 318 ~~~-~~~~----------~~lr~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~ 381 (780)
... .... ...++.+ +++++|++|+|+++.||+..+++||.++.+..+ .+.||+||.+...
T Consensus 518 ~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGGg~~~ 593 (784)
T TIGR02470 518 EKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAGKLDA 593 (784)
T ss_pred hhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeCCccc
Confidence 100 0000 1112333 478999999999999999999999987644333 3558888864321
Q ss_pred ---ChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHH----hcceeeeccCCcCCCcchhhhhhcc
Q 003999 382 ---SGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA----VAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 382 ---~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~----~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
...+..+..+++.+++++.+ -.+ .|.+++...+..+...+|+ .+||||+||.+|||||+++||||||
T Consensus 594 ~~s~d~ee~~~i~~L~~la~~~g----L~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcG 667 (784)
T TIGR02470 594 KESKDREEQAEIEKMHNLIDQYQ----LHG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCG 667 (784)
T ss_pred ccccchhHHHHHHHHHHHHHHhC----CCC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcC
Confidence 11111223345566665543 222 3766543345566666665 2479999999999999999999997
Q ss_pred cCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECCCCHHHHHHHHHHHHc---CCHHHHHHHHHHHhhHh
Q 003999 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDIDAVADAMTLAIN---MRDSEKQLRHEKHYRYV 528 (780)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~~~A~ai~~aL~---m~~~er~~r~~~~~~~V 528 (780)
.|+|+|..+|+.+.+ + .|++|+|.|++++|++|.++++ ..++.+....+..+++|
T Consensus 668 -------------------lPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV 728 (784)
T TIGR02470 668 -------------------LPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRI 728 (784)
T ss_pred -------------------CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 489999999999988 3 4999999999999999999873 23334555556667777
Q ss_pred -hhCCHHHHHHHHHHHH
Q 003999 529 -STHDVAYWARSFAQDL 544 (780)
Q Consensus 529 -~~~~~~~Wa~~~l~~l 544 (780)
+.++|...++.+++-+
T Consensus 729 ~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 729 YEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHhCCHHHHHHHHHHHH
Confidence 5689999888877544
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-21 Score=223.92 Aligned_cols=284 Identities=17% Similarity=0.178 Sum_probs=200.1
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChH----HHHHhh-hcCCEEEeecHHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRD----EILRGL-LNCDLIGFHTFDYA 266 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~----eil~~l-l~~Dligf~t~~y~ 266 (780)
++..+| |+||+|+...+.++.++-.+..++|+++.+|.-+|..--....++.. .+.+.+ -.+|.|...+....
T Consensus 140 i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~~ 217 (465)
T PLN02871 140 VARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPALG 217 (465)
T ss_pred HHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHHH
Confidence 344555 89999997766655554333457899999997654321100111100 112222 25788888887766
Q ss_pred HHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc----CCCeEEEEecc
Q 003999 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF----DGKKLILGIDD 342 (780)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~----~~~~vil~Vdr 342 (780)
+.+.. .+. ....++.++|+|||.+.|.+.... ..+++++ +++++|+++||
T Consensus 218 ~~l~~-----~~~--------------~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vGr 271 (465)
T PLN02871 218 KELEA-----AGV--------------TAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVGR 271 (465)
T ss_pred HHHHH-----cCC--------------CCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeCC
Confidence 65542 111 012367889999999988653211 1233333 46789999999
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHH
Q 003999 343 MDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRF 422 (780)
Q Consensus 343 ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~ 422 (780)
+.+.||+..+++|++++ |+++ |+++| +|+.. ++++++++. .+|+ +.|.++.+
T Consensus 272 l~~~K~~~~li~a~~~~----~~~~----l~ivG-----~G~~~----~~l~~~~~~----------~~V~-f~G~v~~~ 323 (465)
T PLN02871 272 LGAEKNLDFLKRVMERL----PGAR----LAFVG-----DGPYR----EELEKMFAG----------TPTV-FTGMLQGD 323 (465)
T ss_pred CchhhhHHHHHHHHHhC----CCcE----EEEEe-----CChHH----HHHHHHhcc----------CCeE-EeccCCHH
Confidence 99999999999888653 6554 88776 34433 334444432 1366 45789999
Q ss_pred HHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C-----CcEEECC
Q 003999 423 EKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S-----GAIRVNP 496 (780)
Q Consensus 423 el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~-----~al~VnP 496 (780)
++..+|+.||++|+||..||||++++|||||| .|+|+|..+|+.+.+ + +|++++|
T Consensus 324 ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-------------------~PVI~s~~gg~~eiv~~~~~~~~G~lv~~ 384 (465)
T PLN02871 324 ELSQAYASGDVFVMPSESETLGFVVLEAMASG-------------------VPVVAARAGGIPDIIPPDQEGKTGFLYTP 384 (465)
T ss_pred HHHHHHHHCCEEEECCcccccCcHHHHHHHcC-------------------CCEEEcCCCCcHhhhhcCCCCCceEEeCC
Confidence 99999999999999999999999999999997 489999999988776 3 2899999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHH-HHHHHHhh
Q 003999 497 WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQD-LERACRDH 551 (780)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~-l~~~~~~~ 551 (780)
.|++++|++|.++++.+ +.++.+.+..++++.++++...++.++.. ..++...+
T Consensus 385 ~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 385 GDVDDCVEKLETLLADP-ELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999865 34556666788889999999999999874 55555443
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-21 Score=223.53 Aligned_cols=310 Identities=17% Similarity=0.203 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHHHHHHH-cCCCCCEEEEeCCccchHHHHHHHhc-----CCCcEEEEEeCCCCCh----hHhhcC--CC-
Q 003999 178 QAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKRF-----NRIKLGFFLHSPFPSS----EIYRTL--PV- 244 (780)
Q Consensus 178 ~~Y~~vN~~fA~~v~~~-~~~~~DiVwvhDyhl~llp~~lr~~~-----~~~~i~~flH~PfP~~----e~~~~l--p~- 244 (780)
..|.-.++...+.+.+. .+| |+||+||+|..++|.++++.+ .++|++|+.|.+.+.. ..+..+ ++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~p--DviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~ 187 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKP--DIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWE 187 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--cEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCcc
Confidence 34444445444444332 234 999999999999999998874 5889999999874321 111111 11
Q ss_pred ------------h-HHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEE--EcCeEEEEEEeecCCCch
Q 003999 245 ------------R-DEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD--YFGRTVYIKILPVGVHMG 309 (780)
Q Consensus 245 ------------r-~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~--~~gr~~~i~i~P~GId~~ 309 (780)
. .-+..++..||.|...+..|++..++.- .| .+++ ...+..++.++|+|||.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-----------~~-~gl~~~~~~~~~ki~~I~NGid~~ 255 (476)
T cd03791 188 ELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-----------FG-EGLDGLLRARAGKLSGILNGIDYD 255 (476)
T ss_pred chhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-----------CC-cchHHHHHhccCCeEEEeCCCcCc
Confidence 0 1223346678888777777766554210 00 0000 111235788999999999
Q ss_pred hhhhhcCCc-----------hhHHHHHHHHHHc-----CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEE
Q 003999 310 RLESVLNLP-----------ATATKIKEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLV 373 (780)
Q Consensus 310 ~~~~~~~~~-----------~~~~~~~~lr~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLv 373 (780)
.|.+..... ........+++++ +++++|+++||+.+.||+..+++|++++.++. +.|+
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lv 329 (476)
T cd03791 256 VWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLV 329 (476)
T ss_pred ccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEE
Confidence 887542210 0112334566766 46889999999999999999999999987643 4477
Q ss_pred EEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhc
Q 003999 374 QIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVC 453 (780)
Q Consensus 374 qi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac 453 (780)
.+|.. + .++.+++.+++.+.. ..|+++.+ .+.++...+|+.||++++||..||||++.+|||+|
T Consensus 330 i~G~g-----~--~~~~~~~~~~~~~~~--------~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~ 393 (476)
T cd03791 330 ILGSG-----D--PEYEEALRELAARYP--------GRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY 393 (476)
T ss_pred EEecC-----C--HHHHHHHHHHHHhCC--------CcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC
Confidence 77632 1 133445555554431 13666654 45777789999999999999999999999999999
Q ss_pred ccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--------CcEEECCCCHHHHHHHHHHHHcCCH--HHHHHHHH
Q 003999 454 RQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--------GAIRVNPWDIDAVADAMTLAINMRD--SEKQLRHE 522 (780)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m~~--~er~~r~~ 522 (780)
| .|+|+|..+|..+.+ + +|++++|.|+++++++|.+++++.. +++....+
T Consensus 394 G-------------------~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~ 454 (476)
T cd03791 394 G-------------------TVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQR 454 (476)
T ss_pred C-------------------CCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 7 488999999999888 3 5999999999999999999986432 22222223
Q ss_pred HHhhHhhhCCHHHHHHHHHHHH
Q 003999 523 KHYRYVSTHDVAYWARSFAQDL 544 (780)
Q Consensus 523 ~~~~~V~~~~~~~Wa~~~l~~l 544 (780)
+..+ ..+++..-++++++-+
T Consensus 455 ~~~~--~~fsw~~~a~~~~~~y 474 (476)
T cd03791 455 NAMA--QDFSWDRSAKEYLELY 474 (476)
T ss_pred HHhc--cCCChHHHHHHHHHHH
Confidence 2222 3477777777766543
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.8e-21 Score=212.23 Aligned_cols=286 Identities=13% Similarity=0.128 Sum_probs=203.0
Q ss_pred CCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhh-----cCCChHHH-HHhhhcCCEEEeecHHHHHHHHH
Q 003999 198 DDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR-----TLPVRDEI-LRGLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 198 ~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~-----~lp~r~ei-l~~ll~~Dligf~t~~y~~~Fl~ 271 (780)
+.|+||+|++...+.+.+++ +..+.|+++.+|..+|...... .......+ ...+..+|.|.+.+....+.+.+
T Consensus 83 ~~divh~~~~~~~~~~~~~~-~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~ 161 (388)
T TIGR02149 83 DADVVHSHTWYTFLAGHLAK-KLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILK 161 (388)
T ss_pred CCCeEeecchhhhhHHHHHH-HhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHH
Confidence 35999999988776655554 4468899999998765321100 00001111 12345688888888776666543
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCC
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKG 348 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KG 348 (780)
.- -+. ...++.++|+|+|...+.+.. ...+++++ +++++|+++||+.+.||
T Consensus 162 ~~---~~~---------------~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~Grl~~~Kg 215 (388)
T TIGR02149 162 YY---PDL---------------DPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFVGRITRQKG 215 (388)
T ss_pred Hc---CCC---------------CcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEEcccccccC
Confidence 10 011 134678899999998775421 12344444 46789999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHH
Q 003999 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (780)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 428 (780)
+..+++|++++. ++++ |+.+|.. ++..++.+++++.+..++... ..|+++.+.++.+++..+|
T Consensus 216 ~~~li~a~~~l~---~~~~----l~i~g~g-----~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~ 278 (388)
T TIGR02149 216 VPHLLDAVHYIP---KDVQ----VVLCAGA-----PDTPEVAEEVRQAVALLDRNR-----TGIIWINKMLPKEELVELL 278 (388)
T ss_pred HHHHHHHHHHHh---hcCc----EEEEeCC-----CCcHHHHHHHHHHHHHhcccc-----CceEEecCCCCHHHHHHHH
Confidence 999999999873 3443 6655532 222334455666655554322 1377788889999999999
Q ss_pred HhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCH------
Q 003999 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDI------ 499 (780)
Q Consensus 429 ~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~------ 499 (780)
+.|||+|+||..||||++.+|||+|| .|+|+|..+|..+.+. .|++++|.|.
T Consensus 279 ~~aDv~v~ps~~e~~g~~~lEA~a~G-------------------~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~ 339 (388)
T TIGR02149 279 SNAEVFVCPSIYEPLGIVNLEAMACG-------------------TPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQ 339 (388)
T ss_pred HhCCEEEeCCccCCCChHHHHHHHcC-------------------CCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchH
Confidence 99999999999999999999999997 4899999999888773 4899999998
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHHH
Q 003999 500 DAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLERA 547 (780)
Q Consensus 500 ~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~~ 547 (780)
++++++|.++++.+ +++..+.++.++++ ..+++..+++++++-++++
T Consensus 340 ~~l~~~i~~l~~~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 340 AELAKAINILLADP-ELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 99999999999865 34555556667766 5699999999988776653
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.4e-21 Score=223.63 Aligned_cols=330 Identities=14% Similarity=0.140 Sum_probs=207.4
Q ss_pred HHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCC----CCh--------hHhhc
Q 003999 174 RVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPF----PSS--------EIYRT 241 (780)
Q Consensus 174 ~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~--------e~~~~ 241 (780)
.+.|..-.+++...++.+....+..-|+|+-|.+.--+++..|++++ +++.+++.|+-= +.+ +-|+.
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~ 462 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYHF 462 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhhh
Confidence 45677777777777766654443123999999777778888888875 799999999531 111 11111
Q ss_pred C-CChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCc---------eeEEEEcCeEEEEEEeecCCCchhh
Q 003999 242 L-PVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRG---------HIGLDYFGRTVYIKILPVGVHMGRL 311 (780)
Q Consensus 242 l-p~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g---------~~~~~~~gr~~~i~i~P~GId~~~~ 311 (780)
. ....|.+ .+..||.|.-.|+.-....-..+ + .|++-.+ ..+++++ .-++.++|+|+|...|
T Consensus 463 ~~r~~aE~~-a~~~Ad~IIasT~qEi~g~~~~i----~-qy~sh~~f~~p~L~rvv~GId~~--~~ki~VVppGvD~~~F 534 (815)
T PLN00142 463 SCQFTADLI-AMNHADFIITSTYQEIAGSKDTV----G-QYESHTAFTLPGLYRVVHGIDVF--DPKFNIVSPGADMSIY 534 (815)
T ss_pred hhchHHHHH-HHHhhhHHHhCcHHHHhcccchh----h-hhhcccccccchhhhhhcccccc--ccCeeEECCCCChhhc
Confidence 0 0111222 45567766655543221100000 0 0000000 0012222 1278889999999988
Q ss_pred hhhcCCchhHHHH-------H-------HHHHHc-----CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEE
Q 003999 312 ESVLNLPATATKI-------K-------EIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVL 372 (780)
Q Consensus 312 ~~~~~~~~~~~~~-------~-------~lr~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvL 372 (780)
.+... ...+. . ..++.+ +++++|++|+|+++.||+..+++||.++.+..+++ .|
T Consensus 535 ~P~~~---~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~----~L 607 (815)
T PLN00142 535 FPYTE---KQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELV----NL 607 (815)
T ss_pred CCCCh---HHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCc----EE
Confidence 75321 01110 0 011222 35779999999999999999999999886665554 48
Q ss_pred EEEEcCC-CCChhHHH--HHHHHHHHHHHHHhhccCCCCcccEEEecC---CCCHHHHHHHHH-hcceeeeccCCcCCCc
Q 003999 373 VQIVNPA-RGSGKDVQ--EAKKETYLTAKRINEVYGSPNYEPVVLIDR---PVPRFEKSAYYA-VAECCIVNAVRDGMNL 445 (780)
Q Consensus 373 vqi~~p~-r~~~~~~~--~l~~ei~~lv~~In~~~g~~~~~pV~~~~~---~v~~~el~aly~-~ADv~vvtS~rEGmnL 445 (780)
|+||.+. .....+.+ +..+++.+++++.+ ..+ .|.++.. .++..+++.+|+ ++|+||+||.+||||+
T Consensus 608 VIVGgg~d~~~s~d~ee~~el~~L~~La~~lg----L~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGL 681 (815)
T PLN00142 608 VVVGGFIDPSKSKDREEIAEIKKMHSLIEKYN----LKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGL 681 (815)
T ss_pred EEEECCccccccccHHHHHHHHHHHHHHHHcC----CCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCH
Confidence 8888541 11111111 12234555655543 222 3665532 445678888777 5799999999999999
Q ss_pred chhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECCCCHHHHHHHHHHHHc---CCHHHHHH
Q 003999 446 VPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDIDAVADAMTLAIN---MRDSEKQL 519 (780)
Q Consensus 446 v~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~~~A~ai~~aL~---m~~~er~~ 519 (780)
+++|||||| .|+|+|..+|+.+.+ + .|++|+|.|++++|++|.+++. ..++.++.
T Consensus 682 vvLEAMA~G-------------------lPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~ 742 (815)
T PLN00142 682 TVVEAMTCG-------------------LPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNK 742 (815)
T ss_pred HHHHHHHcC-------------------CCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 999999997 489999999999888 3 4999999999999999987653 23444555
Q ss_pred HHHHHhhHh-hhCCHHHHHHHHHHHH
Q 003999 520 RHEKHYRYV-STHDVAYWARSFAQDL 544 (780)
Q Consensus 520 r~~~~~~~V-~~~~~~~Wa~~~l~~l 544 (780)
..+..++.+ +.++|...++++++-.
T Consensus 743 mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 743 ISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 556677777 5689999888877643
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-20 Score=209.09 Aligned_cols=284 Identities=20% Similarity=0.190 Sum_probs=200.2
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhc-----CCC-hHHH-HHhhhcCCEEEeecHHHHHHHHHH
Q 003999 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRT-----LPV-RDEI-LRGLLNCDLIGFHTFDYARHFLSC 272 (780)
Q Consensus 200 DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~-----lp~-r~ei-l~~ll~~Dligf~t~~y~~~Fl~~ 272 (780)
|+|++|++....++..+.+. .+++++++.|........... .+. +..+ ...+..+|.|.+.+......+...
T Consensus 103 Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~ 181 (398)
T cd03800 103 DLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSL 181 (398)
T ss_pred cEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHH
Confidence 99999998877776666654 478999999976532111000 000 1111 223457999999888766665431
Q ss_pred HHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHH
Q 003999 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (780)
Q Consensus 273 ~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~ 352 (780)
.+ ....++.++|+|+|.+.+...... .....++. ...++.+|+++||+++.||+..+
T Consensus 182 ----~~---------------~~~~~~~vi~ng~~~~~~~~~~~~---~~~~~~~~-~~~~~~~i~~~gr~~~~k~~~~l 238 (398)
T cd03800 182 ----YG---------------AYPRRIRVVPPGVDLERFTPYGRA---EARRARLL-RDPDKPRILAVGRLDPRKGIDTL 238 (398)
T ss_pred ----cc---------------ccccccEEECCCCCccceecccch---hhHHHhhc-cCCCCcEEEEEcccccccCHHHH
Confidence 11 112247889999999887643211 11111111 11467899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcc
Q 003999 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (780)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 432 (780)
++|+..+.+++|+++ |+.+|...... ......+++.++++.+.. ..|. +.+.++.+++..+|+.||
T Consensus 239 l~a~~~l~~~~~~~~----l~i~G~~~~~~---~~~~~~~~~~~~~~~~~~------~~v~-~~g~~~~~~~~~~~~~ad 304 (398)
T cd03800 239 IRAYAELPELRERAN----LVIVGGPRDDI---LAMDEEELRELARELGVI------DRVD-FPGRVSREDLPALYRAAD 304 (398)
T ss_pred HHHHHHHHHhCCCeE----EEEEECCCCcc---hhhhhHHHHHHHHhcCCC------ceEE-EeccCCHHHHHHHHHhCC
Confidence 999999988877765 88887543221 112223345555443221 1254 557899999999999999
Q ss_pred eeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHHHHH
Q 003999 433 CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLA 509 (780)
Q Consensus 433 v~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~a 509 (780)
++++||..||||++++|||+|| .|+|+|+.+|..+.+. .|++++|.|+++++++|.++
T Consensus 305 i~l~ps~~e~~~~~l~Ea~a~G-------------------~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l 365 (398)
T cd03800 305 VFVNPALYEPFGLTALEAMACG-------------------LPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRL 365 (398)
T ss_pred EEEecccccccCcHHHHHHhcC-------------------CCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHH
Confidence 9999999999999999999997 4899999999888882 48999999999999999999
Q ss_pred HcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHH
Q 003999 510 INMRDSEKQLRHEKHYRYV-STHDVAYWARSFA 541 (780)
Q Consensus 510 L~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l 541 (780)
+++++ +++...++.++++ +.+++...++.++
T Consensus 366 ~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 366 LTDPA-LRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 98753 4555566677777 7799998888775
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.5e-21 Score=218.69 Aligned_cols=299 Identities=14% Similarity=0.118 Sum_probs=201.4
Q ss_pred cCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCCh---hHhhc---CCCh
Q 003999 172 FDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS---EIYRT---LPVR 245 (780)
Q Consensus 172 f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~~~---lp~r 245 (780)
|..-.|....-..-.|. .+...+ ++.|+||+|......++..+.++..+.|++++.|--++.. +++.. .+..
T Consensus 149 ~~~~~~~~~~~~~~l~~-~l~~~~-~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~~ 226 (475)
T cd03813 149 FVDYFWTVRNMLSPLLA-AIARPL-PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSYF 226 (475)
T ss_pred HHHHHHHHHHHHHHHHH-HhccCC-CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHHH
Confidence 44445543332333332 233333 4569999998765555555545556899999999866521 22211 0000
Q ss_pred HH--------HHH-hhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcC
Q 003999 246 DE--------ILR-GLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLN 316 (780)
Q Consensus 246 ~e--------il~-~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~ 316 (780)
+. +.+ .+-.||.|...+....+ .+. .++....++.++|+|||.+.|.+...
T Consensus 227 ~~~~~~~~~~l~~~~~~~ad~Ii~~s~~~~~-~~~-------------------~~g~~~~ki~vIpNgid~~~f~~~~~ 286 (475)
T cd03813 227 RRLWIRFFESLGRLAYQAADRITTLYEGNRE-RQI-------------------EDGADPEKIRVIPNGIDPERFAPARR 286 (475)
T ss_pred HHHHHHHHHHHHHHHHHhCCEEEecCHHHHH-HHH-------------------HcCCCHHHeEEeCCCcCHHHcCCccc
Confidence 11 111 12356666655543222 111 11122346788999999998865311
Q ss_pred CchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHH
Q 003999 317 LPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLT 396 (780)
Q Consensus 317 ~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~l 396 (780)
. ....++++|+++||+.+.||+..+++|++.+.++.|+++ |+++|.. ++..++.++++++
T Consensus 287 -----~------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g-----~~~~~~~~e~~~l 346 (475)
T cd03813 287 -----A------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPT-----DEDPEYAEECREL 346 (475)
T ss_pred -----c------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEECCC-----CcChHHHHHHHHH
Confidence 0 112567899999999999999999999999998888876 8777632 1222455677777
Q ss_pred HHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceE
Q 003999 397 AKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSML 476 (780)
Q Consensus 397 v~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~l 476 (780)
+++.+.. ..|.++ | .+++..+|+.||++|+||..|||+++++|||||| .|+
T Consensus 347 i~~l~l~------~~V~f~-G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G-------------------~PV 397 (475)
T cd03813 347 VESLGLE------DNVKFT-G---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAG-------------------IPV 397 (475)
T ss_pred HHHhCCC------CeEEEc-C---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcC-------------------CCE
Confidence 7766532 136654 4 5689999999999999999999999999999997 489
Q ss_pred EEcCCCCccccC-C--------CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh-CCHHHHHHHHHH
Q 003999 477 VVSEFIGCSPSL-S--------GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQ 542 (780)
Q Consensus 477 V~Se~~G~~~~l-~--------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~~~l~ 542 (780)
|+|..+|+.+.+ + .|++++|.|++++|++|.++++.++ .+....+..++++.+ +++...++++.+
T Consensus 398 Vatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~~~-~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 398 VATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLKDPE-LRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred EECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999988877 4 4899999999999999999998654 456666677887766 566666666654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-20 Score=207.65 Aligned_cols=286 Identities=12% Similarity=0.090 Sum_probs=191.3
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcE-EEEEeCC-CCChhHhhcCCChHHHHHhhh--cCCEEEeecHHHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKL-GFFLHSP-FPSSEIYRTLPVRDEILRGLL--NCDLIGFHTFDYAR 267 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i-~~flH~P-fP~~e~~~~lp~r~eil~~ll--~~Dligf~t~~y~~ 267 (780)
++..+| |+||+|+++.+. ..++.+. ...++ .+..|.. +-...- -.+....++.+. .+|.+...+....+
T Consensus 77 l~~~~~--Divh~~~~~~~~-~~~~~~~-~~~~~~i~~~h~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~vs~~~~~ 149 (374)
T TIGR03088 77 LRQLRP--DIVHTRNLAALE-AQLPAAL-AGVPARIHGEHGRDVFDLDG---SNWKYRWLRRLYRPLIHHYVAVSRDLED 149 (374)
T ss_pred HHHhCC--CEEEEcchhHHH-HHHHHHh-cCCCeEEEeecCcccccchh---hHHHHHHHHHHHHhcCCeEEEeCHHHHH
Confidence 344566 899999887543 2222222 22332 2233321 100000 011122333322 36777777776665
Q ss_pred HHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--CCCeEEEEeccccc
Q 003999 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMDI 345 (780)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~--~~~~vil~Vdrld~ 345 (780)
.+.+. ++. ...++.++|+|||.+.|.+... . .....++.+ .++.+|+++||+++
T Consensus 150 ~~~~~----~~~---------------~~~~~~vi~ngvd~~~~~~~~~---~--~~~~~~~~~~~~~~~~i~~vGrl~~ 205 (374)
T TIGR03088 150 WLRGP----VKV---------------PPAKIHQIYNGVDTERFHPSRG---D--RSPILPPDFFADESVVVGTVGRLQA 205 (374)
T ss_pred HHHHh----cCC---------------ChhhEEEeccCccccccCCCcc---c--hhhhhHhhcCCCCCeEEEEEecCCc
Confidence 55431 121 2345788999999988764321 1 111112222 46789999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+..+++|+..+++++|+...++.|+.+|. |+..+ ++++.+++.+. ...+++.+. .+++.
T Consensus 206 ~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~-----g~~~~----~~~~~~~~~~~-------~~~v~~~g~--~~~~~ 267 (374)
T TIGR03088 206 VKDQPTLVRAFALLVRQLPEGAERLRLVIVGD-----GPARG----ACEQMVRAAGL-------AHLVWLPGE--RDDVP 267 (374)
T ss_pred ccCHHHHHHHHHHHHHhCcccccceEEEEecC-----CchHH----HHHHHHHHcCC-------cceEEEcCC--cCCHH
Confidence 99999999999999999887656677988873 33323 34444443321 234455553 57899
Q ss_pred HHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHH
Q 003999 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAV 502 (780)
Q Consensus 426 aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~ 502 (780)
.+|+.||++|+||..||||++++|||+|| .|+|+|..+|..+.+. .|++++|.|++++
T Consensus 268 ~~~~~adi~v~pS~~Eg~~~~~lEAma~G-------------------~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~l 328 (374)
T TIGR03088 268 ALMQALDLFVLPSLAEGISNTILEAMASG-------------------LPVIATAVGGNPELVQHGVTGALVPPGDAVAL 328 (374)
T ss_pred HHHHhcCEEEeccccccCchHHHHHHHcC-------------------CCEEEcCCCCcHHHhcCCCceEEeCCCCHHHH
Confidence 99999999999999999999999999997 4899999999888883 3899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHH
Q 003999 503 ADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLER 546 (780)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~ 546 (780)
|++|.++++.++ ++....++.++++ ..+++...++.+.+-.++
T Consensus 329 a~~i~~l~~~~~-~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 329 ARALQPYVSDPA-ARRAHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred HHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 999999998654 4555666778887 578999888888766554
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.1e-20 Score=202.40 Aligned_cols=280 Identities=18% Similarity=0.198 Sum_probs=198.1
Q ss_pred HHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhh-hcCCEEEeecHHHHHH
Q 003999 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGL-LNCDLIGFHTFDYARH 268 (780)
Q Consensus 190 ~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l-l~~Dligf~t~~y~~~ 268 (780)
++++..+| |+||+|.+|..++..+++...+..++....|...+..-+ +..+.+.. ..++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 34455666 899999999888888888777778888888865432111 11111111 1245555555555555
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccc
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDI 345 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~ 345 (780)
|+... + -...++.++|+|+|...|.... .....+++++ +++++++++||+.+
T Consensus 145 ~~~~~----~---------------~~~~~~~~i~ng~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIASK----A---------------FNANKSFVVYNGIDTDRFRKDP------ARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhcc----C---------------CCcccEEEEccccchhhcCcch------HHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 54310 0 0123678899999988775421 1223456665 46789999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+..+++|+.++.+++|+++ |+++|. |++.++ +.+.+++.|.. ..|.++ +. .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~----~~~~~~~~~~~------~~v~~~-g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRAT----LERLIKALGLS------NRVKLL-GL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHH----HHHHHHhcCCC------CcEEEe-cc--cccHH
Confidence 9999999999999998888766 877763 333333 33444433211 125554 44 46899
Q ss_pred HHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC-CcEEECCCCHHHHHH
Q 003999 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-GAIRVNPWDIDAVAD 504 (780)
Q Consensus 426 aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ 504 (780)
.+|+.||++++||..||||++++|||+|| .|+|+|..+|..+.+. +|+.++|.|++++|+
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G-------------------~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~ 318 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMACE-------------------LPVVATDAGGVREVVGDSGLIVPISDPEALAN 318 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHcC-------------------CCEEEecCCChhhEecCCceEeCCCCHHHHHH
Confidence 99999999999999999999999999997 4889999988888774 689999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHhhH-hhhCCHHHHHHHHHHHH
Q 003999 505 AMTLAINMRDSEKQLRHEKHYRY-VSTHDVAYWARSFAQDL 544 (780)
Q Consensus 505 ai~~aL~m~~~er~~r~~~~~~~-V~~~~~~~Wa~~~l~~l 544 (780)
+|.+++++++..+..+.+. +++ .+.+++..+++.+++-+
T Consensus 319 ~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 319 KIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHh
Confidence 9999998777666555555 444 46699999999887644
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.1e-20 Score=202.46 Aligned_cols=274 Identities=18% Similarity=0.133 Sum_probs=192.2
Q ss_pred HHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCC----CChhHhhcCCChHHHHHh-hhcCCEEEeecHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPF----PSSEIYRTLPVRDEILRG-LLNCDLIGFHTFDY 265 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~e~~~~lp~r~eil~~-ll~~Dligf~t~~y 265 (780)
+++..+| |+||+|+.+..+....+.++ .++|+.+.+|... +.............+.+. +..+|.|.+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLARR-LGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHHH-cCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 4555666 89999977644433333333 4689999889532 111111000011222222 34589998888765
Q ss_pred HHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccc
Q 003999 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDI 345 (780)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~ 345 (780)
.+.+.+ .|. ...++.++|+|+|.+.+.+.. .-.++++++++||+.+
T Consensus 154 ~~~~~~-----~~~---------------~~~~i~vi~~g~d~~~~~~~~--------------~~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLA-----LGF---------------PPEKVHVHPIGVDTAKFTPAT--------------PARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHH-----cCC---------------CHHHeEEecCCCCHHhcCCCC--------------CCCCCcEEEEEEeecc
Confidence 555542 121 123577899999988775321 0134678999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+..+++|+..+.+++|+++ |+++|. ++.. .++++++++.+ .. ..|. +.+.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~----~~~~~~~~~~~----~~--~~v~-~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPLL----AALEALARALG----LG--GRVT-FLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chHH----HHHHHHHHHcC----CC--CeEE-ECCCCCHHHHH
Confidence 9999999999999988888765 887773 3322 34455554432 11 1254 56789999999
Q ss_pred HHHHhcceeeeccC------CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECC
Q 003999 426 AYYAVAECCIVNAV------RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNP 496 (780)
Q Consensus 426 aly~~ADv~vvtS~------rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP 496 (780)
.+|+.||++++||. .||||++++|||+|| .|+|+|..+|..+.+. .|++++|
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G-------------------~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASG-------------------VPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHcC-------------------CCEEEeCCCCchhheecCCeeEEECC
Confidence 99999999999997 599999999999997 4899999999888772 4899999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHH
Q 003999 497 WDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFA 541 (780)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l 541 (780)
.|+++++++|.++++.++ .+.....+.++++ ..+++..+++.+.
T Consensus 321 ~d~~~l~~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 321 GDVAALAAALGRLLADPD-LRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred CCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 999999999999998653 4555556678877 4689888888765
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.2e-20 Score=206.75 Aligned_cols=274 Identities=15% Similarity=0.107 Sum_probs=182.2
Q ss_pred cCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCC-------------hH--HH-----------
Q 003999 195 INPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPV-------------RD--EI----------- 248 (780)
Q Consensus 195 ~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~-------------r~--ei----------- 248 (780)
.+| |+|..|--+...+ .+.+.++++|+++.+|-|.-+++.+..+-. +. .+
T Consensus 106 ~~p--Dv~i~~~g~~~~~--~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~ 181 (419)
T cd03806 106 LVP--DIFIDTMGYPFTY--PLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAF 181 (419)
T ss_pred cCC--CEEEEcCCcccHH--HHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHH
Confidence 357 6555443233323 355567789999999955434454422111 11 01
Q ss_pred HH--hhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHH
Q 003999 249 LR--GLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKE 326 (780)
Q Consensus 249 l~--~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~ 326 (780)
+. .+-.||.|-..+....+++.+. .+ ...++.++|+|+|.+.|.+.. .
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~----~~----------------~~~~~~vi~~gvd~~~~~~~~---~------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSL----WK----------------RNTKPSIVYPPCDVEELLKLP---L------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHH----hC----------------cCCCcEEEcCCCCHHHhcccc---c-------
Confidence 11 1335788887776555454321 11 112577889999988775321 0
Q ss_pred HHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCC-CceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccC
Q 003999 327 IEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYG 405 (780)
Q Consensus 327 lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g 405 (780)
....++.+|++|+|+.+.||+...++||.++.+++|+.. .++.|+++|.... ++..+..+++++++++.+..
T Consensus 232 --~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~---~~~~~~~~~L~~~~~~l~l~-- 304 (419)
T cd03806 232 --DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRN---EDDEKRVEDLKLLAKELGLE-- 304 (419)
T ss_pred --ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCC---cccHHHHHHHHHHHHHhCCC--
Confidence 012456899999999999999999999999999887631 2466888875321 11123455667777665421
Q ss_pred CCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc
Q 003999 406 SPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (780)
Q Consensus 406 ~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (780)
..|+|. +.++.+++.++|+.||+++.||..||||++++|||||| .|+|+|..+|..
T Consensus 305 ----~~V~f~-g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G-------------------~pvIa~~~ggp~ 360 (419)
T cd03806 305 ----DKVEFV-VNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAG-------------------LIPLAHASGGPL 360 (419)
T ss_pred ----CeEEEe-cCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcC-------------------CcEEEEcCCCCc
Confidence 136644 68999999999999999999999999999999999997 478888887865
Q ss_pred c-cCC------CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHH
Q 003999 486 P-SLS------GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAY 535 (780)
Q Consensus 486 ~-~l~------~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~ 535 (780)
+ .+. .|++++ |++++|++|.+++++++.+++.+.+..++...+++...
T Consensus 361 ~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~~ 415 (419)
T cd03806 361 LDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDEE 415 (419)
T ss_pred hheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHHH
Confidence 4 333 378874 99999999999999987666554333444445565443
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.9e-19 Score=197.34 Aligned_cols=285 Identities=13% Similarity=0.142 Sum_probs=195.4
Q ss_pred HHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcC---CCcEEEEEeCCCCChhHhhcCCChHHH-HHhhhcCCEEEe
Q 003999 185 KIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFN---RIKLGFFLHSPFPSSEIYRTLPVRDEI-LRGLLNCDLIGF 260 (780)
Q Consensus 185 ~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~---~~~i~~flH~PfP~~e~~~~lp~r~ei-l~~ll~~Dligf 260 (780)
+.+.+.+ +..+| |+|++|.+....++.++.++.. +.++.+++|..-.. ....-+....+ ...+..+|.|..
T Consensus 74 ~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii~ 148 (371)
T cd04962 74 SKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVTA 148 (371)
T ss_pred HHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEEE
Confidence 4444444 44565 8999998766555555544322 67888889953211 11111222222 234557999999
Q ss_pred ecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEE
Q 003999 261 HTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLI 337 (780)
Q Consensus 261 ~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vi 337 (780)
.+....+.+...+ + ...++.++|+|+|...+.+.. . ...++++ .+++++
T Consensus 149 ~s~~~~~~~~~~~----~----------------~~~~i~vi~n~~~~~~~~~~~-----~---~~~~~~~~~~~~~~~i 200 (371)
T cd04962 149 VSESLRQETYELF----D----------------ITKEIEVIPNFVDEDRFRPKP-----D---EALKRRLGAPEGEKVL 200 (371)
T ss_pred cCHHHHHHHHHhc----C----------------CcCCEEEecCCcCHhhcCCCc-----h---HHHHHhcCCCCCCeEE
Confidence 9987766654311 1 122578899999987765321 1 1233444 478899
Q ss_pred EEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecC
Q 003999 338 LGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDR 417 (780)
Q Consensus 338 l~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~ 417 (780)
++++|+.+.||+..+++|++++.++ ++++ |+.+|. +++..+ +++++.+.+ .. ..|.++.
T Consensus 201 l~~g~l~~~K~~~~li~a~~~l~~~-~~~~----l~i~G~-----g~~~~~----~~~~~~~~~----~~--~~v~~~g- 259 (371)
T cd04962 201 IHISNFRPVKRIDDVIRIFAKVRKE-VPAR----LLLVGD-----GPERSP----AERLARELG----LQ--DDVLFLG- 259 (371)
T ss_pred EEecccccccCHHHHHHHHHHHHhc-CCce----EEEEcC-----CcCHHH----HHHHHHHcC----CC--ceEEEec-
Confidence 9999999999999999999988654 3344 776763 333333 334443332 11 1266554
Q ss_pred CCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEE
Q 003999 418 PVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRV 494 (780)
Q Consensus 418 ~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~V 494 (780)
. .+++..+|+.||++|+||..||||++++|||+|| .|+|+|+.+|..+.+ + .|+++
T Consensus 260 ~--~~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-------------------~PvI~s~~~~~~e~i~~~~~G~~~ 318 (371)
T cd04962 260 K--QDHVEELLSIADLFLLPSEKESFGLAALEAMACG-------------------VPVVASNAGGIPEVVKHGETGFLV 318 (371)
T ss_pred C--cccHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-------------------CCEEEeCCCCchhhhcCCCceEEc
Confidence 4 3579999999999999999999999999999997 489999999988877 3 48999
Q ss_pred CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhH-hhhCCHHHHHHHHHHHHH
Q 003999 495 NPWDIDAVADAMTLAINMRDSEKQLRHEKHYRY-VSTHDVAYWARSFAQDLE 545 (780)
Q Consensus 495 nP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~-V~~~~~~~Wa~~~l~~l~ 545 (780)
+|.|++++|++|.++++++. ++....++++++ ...+++...++.+.+-++
T Consensus 319 ~~~~~~~l~~~i~~l~~~~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 319 DVGDVEAMAEYALSLLEDDE-LWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred CCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999999998654 455555667777 466898888888876554
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-19 Score=198.49 Aligned_cols=268 Identities=17% Similarity=0.194 Sum_probs=191.2
Q ss_pred HHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHH
Q 003999 193 EVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (780)
Q Consensus 193 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~ 272 (780)
+..+| |+|++|..+...+..++.+ ..++++.+.+|-.++....+ ..+ +..+|.+.+.+....+.+.
T Consensus 75 ~~~~~--dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~~------~~~---~~~~~~vi~~s~~~~~~~~-- 140 (355)
T cd03819 75 REEKV--DIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFRY------NAI---MARGDRVIAVSNFIADHIR-- 140 (355)
T ss_pred HHcCC--CEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHHH------HHH---HHhcCEEEEeCHHHHHHHH--
Confidence 44455 8999999776655555444 34789999999877543211 222 3468988887765554443
Q ss_pred HHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCCh
Q 003999 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGI 349 (780)
Q Consensus 273 ~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KGi 349 (780)
...+. ...++.++|+|+|...|...... ......+++++ +++++++++||+.+.||+
T Consensus 141 --~~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~ 200 (355)
T cd03819 141 --ENYGV---------------DPDRIRVIPRGVDLDRFDPGAVP---PERILALAREWPLPKGKPVILLPGRLTRWKGQ 200 (355)
T ss_pred --HhcCC---------------ChhhEEEecCCccccccCccccc---hHHHHHHHHHcCCCCCceEEEEeeccccccCH
Confidence 11221 23467889999999887643221 11222355555 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHH
Q 003999 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (780)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 429 (780)
..+++|+..+.+.+++++ |+.+|... ....+.+++.+.+.+.+.. ..|.+++ . .+++..+|+
T Consensus 201 ~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~~~~~------~~v~~~g-~--~~~~~~~l~ 262 (355)
T cd03819 201 EVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKRLGLQ------DRVTFVG-H--CSDMPAAYA 262 (355)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHHcCCc------ceEEEcC-C--cccHHHHHH
Confidence 999999999988767665 88777432 2223444444444443211 1266554 4 678999999
Q ss_pred hcceeeecc-CCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHH
Q 003999 430 VAECCIVNA-VRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (780)
Q Consensus 430 ~ADv~vvtS-~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~a 505 (780)
.||++++|| ..||||++.+|||||| .|+|+|..+|..+.+. .|++++|.|+++++++
T Consensus 263 ~ad~~i~ps~~~e~~~~~l~EA~a~G-------------------~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~ 323 (355)
T cd03819 263 LADIVVSASTEPEAFGRTAVEAQAMG-------------------RPVIASDHGGARETVRPGETGLLVPPGDAEALAQA 323 (355)
T ss_pred hCCEEEecCCCCCCCchHHHHHHhcC-------------------CCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHH
Confidence 999999999 7899999999999997 4889999888877773 4899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhhHhhhC
Q 003999 506 MTLAINMRDSEKQLRHEKHYRYVSTH 531 (780)
Q Consensus 506 i~~aL~m~~~er~~r~~~~~~~V~~~ 531 (780)
|..++...++++....++.++++.++
T Consensus 324 i~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 324 LDQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 99888877777887778888888654
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-19 Score=197.41 Aligned_cols=257 Identities=12% Similarity=0.090 Sum_probs=176.0
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHH-hhhcCCEEEeecHHHHHHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILR-GLLNCDLIGFHTFDYARHFL 270 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~-~ll~~Dligf~t~~y~~~Fl 270 (780)
.+..++ |+|++|..+...++.++.++.....+.+..|..+...+.+........+.+ .+..+|.+-..+....+.+.
T Consensus 76 ~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 153 (358)
T cd03812 76 IKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWLF 153 (358)
T ss_pred HhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHHH
Confidence 344455 899999988777777766665555667778877654433221111001111 12346776666655444432
Q ss_pred HHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccC
Q 003999 271 SCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFK 347 (780)
Q Consensus 271 ~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~K 347 (780)
.. ....++.++|+|+|...+.... ...+ . ++++ .++.+|+++||+++.|
T Consensus 154 ~~---------------------~~~~~~~vi~ngvd~~~~~~~~---~~~~---~-~~~~~~~~~~~~i~~vGr~~~~K 205 (358)
T cd03812 154 GK---------------------VKNKKFKVIPNGIDLEKFIFNE---EIRK---K-RRELGILEDKFVIGHVGRFSEQK 205 (358)
T ss_pred hC---------------------CCcccEEEEeccCcHHHcCCCc---hhhh---H-HHHcCCCCCCEEEEEEecccccc
Confidence 20 0123678999999998875421 1111 1 2222 5788999999999999
Q ss_pred ChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHH
Q 003999 348 GISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAY 427 (780)
Q Consensus 348 Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~al 427 (780)
|+..+++|+..+.+++|+++ |+.+|. |+..+.+ ++.+++. +.. ..|.+. +. .+++..+
T Consensus 206 g~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~~----~~~~~~~----~~~--~~v~~~-g~--~~~~~~~ 263 (358)
T cd03812 206 NHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEEI----KKKVKEL----GLE--DKVIFL-GV--RNDVPEL 263 (358)
T ss_pred ChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHH----HHHHHhc----CCC--CcEEEe-cc--cCCHHHH
Confidence 99999999999999998876 887773 3433333 3333332 211 136554 44 6789999
Q ss_pred HHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC--CcEEECCCCHHHHHHH
Q 003999 428 YAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNPWDIDAVADA 505 (780)
Q Consensus 428 y~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~a 505 (780)
|+.||++|+||..||||++++|||||| .|+|+|..+|..+.+. ++++..+.+++++|++
T Consensus 264 ~~~adi~v~ps~~E~~~~~~lEAma~G-------------------~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~ 324 (358)
T cd03812 264 LQAMDVFLFPSLYEGLPLVLIEAQASG-------------------LPCILSDTITKEVDLTDLVKFLSLDESPEIWAEE 324 (358)
T ss_pred HHhcCEEEecccccCCCHHHHHHHHhC-------------------CCEEEEcCCchhhhhccCccEEeCCCCHHHHHHH
Confidence 999999999999999999999999997 5899999999888774 3566666678999999
Q ss_pred HHHHHcCCHHHHHH
Q 003999 506 MTLAINMRDSEKQL 519 (780)
Q Consensus 506 i~~aL~m~~~er~~ 519 (780)
|.+++++|+..+..
T Consensus 325 i~~l~~~~~~~~~~ 338 (358)
T cd03812 325 ILKLKSEDRRERSS 338 (358)
T ss_pred HHHHHhCcchhhhh
Confidence 99999998755444
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.3e-19 Score=201.95 Aligned_cols=289 Identities=11% Similarity=0.071 Sum_probs=188.6
Q ss_pred HHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcE-EEEEeCCCCChhHhhcCCChHHHH----HhhhcCCEEEeecHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKL-GFFLHSPFPSSEIYRTLPVRDEIL----RGLLNCDLIGFHTFDY 265 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i-~~flH~PfP~~e~~~~lp~r~eil----~~ll~~Dligf~t~~y 265 (780)
+++..+| |+||.|++...+++.+..... .+++ +...|. ++... +..++ ..+..++++.-.+. +
T Consensus 275 ~ir~~rp--DIVHt~~~~a~l~g~laA~la-gvpviv~~~h~-~~~~~-------~~r~~~~e~~~~~~a~~i~~~sd-~ 342 (578)
T PRK15490 275 HLCERKL--DYLSVWQDGACLMIALAALIA-GVPRIQLGLRG-LPPVV-------RKRLFKPEYEPLYQALAVVPGVD-F 342 (578)
T ss_pred HHHHcCC--CEEEEcCcccHHHHHHHHHhc-CCCEEEEeecc-cCCcc-------hhhHHHHHHHHhhhhceeEecch-h
Confidence 4455566 899999999877766665543 4555 445676 33211 11211 11233444333222 3
Q ss_pred HHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc-CCCeEEEEecccc
Q 003999 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMD 344 (780)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~~~~vil~Vdrld 344 (780)
..+.....+.+.. .+.....+|.++|+|||+.+|.+....+ ......++..+ .+..+|++|+|+.
T Consensus 343 v~~s~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~ 408 (578)
T PRK15490 343 MSNNHCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFV 408 (578)
T ss_pred hhccHHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEe
Confidence 3222222121110 0111345789999999999887532111 11122233333 3557888999999
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHH
Q 003999 345 IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEK 424 (780)
Q Consensus 345 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el 424 (780)
+.||...+++|+.++++++|+++ |+++| +|+.. .++++++++.+.. ..|+|+ |. .+++
T Consensus 409 ~~Kg~~~LI~A~a~llk~~pdir----LvIVG-----dG~~~----eeLk~la~elgL~------d~V~Fl-G~--~~Dv 466 (578)
T PRK15490 409 GDKNPFAWIDFAARYLQHHPATR----FVLVG-----DGDLR----AEAQKRAEQLGIL------ERILFV-GA--SRDV 466 (578)
T ss_pred hhcCHHHHHHHHHHHHhHCCCeE----EEEEe-----CchhH----HHHHHHHHHcCCC------CcEEEC-CC--hhhH
Confidence 99999999999999999999876 88777 34433 3455555544321 136655 44 4689
Q ss_pred HHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECCCCHHH
Q 003999 425 SAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDIDA 501 (780)
Q Consensus 425 ~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~~ 501 (780)
..+|+.||+||+||.+|||+++++|||||| .|+|+|..+|+.+.+ + +|++|+|.|+++
T Consensus 467 ~~~LaaADVfVlPS~~EGfp~vlLEAMA~G-------------------lPVVATdvGG~~EiV~dG~nG~LVp~~D~~a 527 (578)
T PRK15490 467 GYWLQKMNVFILFSRYEGLPNVLIEAQMVG-------------------VPVISTPAGGSAECFIEGVSGFILDDAQTVN 527 (578)
T ss_pred HHHHHhCCEEEEcccccCccHHHHHHHHhC-------------------CCEEEeCCCCcHHHcccCCcEEEECCCChhh
Confidence 999999999999999999999999999997 489999999998877 3 489999999999
Q ss_pred HHHHHHHHHcCCH--HHHHHHHHHHhhHhh-hCCHHHHHHHHHHHHHH
Q 003999 502 VADAMTLAINMRD--SEKQLRHEKHYRYVS-THDVAYWARSFAQDLER 546 (780)
Q Consensus 502 ~A~ai~~aL~m~~--~er~~r~~~~~~~V~-~~~~~~Wa~~~l~~l~~ 546 (780)
+++++..+..+.. .++....++.++++. .+++...++.+++-++.
T Consensus 528 La~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 528 LDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 9998854433222 123333456788874 58988888888876653
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.7e-19 Score=197.38 Aligned_cols=282 Identities=16% Similarity=0.153 Sum_probs=194.8
Q ss_pred CCEEEEeCCccchH-HHHHHHhcCCCcEEEEEeCCCCChhHh-hcCC--ChH----HHHHh-hhcCCEEEeecHHHHHHH
Q 003999 199 DDCVWVHDYHLMVL-PTFLRKRFNRIKLGFFLHSPFPSSEIY-RTLP--VRD----EILRG-LLNCDLIGFHTFDYARHF 269 (780)
Q Consensus 199 ~DiVwvhDyhl~ll-p~~lr~~~~~~~i~~flH~PfP~~e~~-~~lp--~r~----eil~~-ll~~Dligf~t~~y~~~F 269 (780)
.|+||+|...+... ..++-++..+.++++..|--||..-.- ...+ ... .+.+. +-.+|.|...+....+.+
T Consensus 107 ~Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~ 186 (412)
T PRK10307 107 PDRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKA 186 (412)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHH
Confidence 39999998665422 223323334668888788656532110 0010 001 11122 335899988888766665
Q ss_pred HHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEecccccc
Q 003999 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIF 346 (780)
Q Consensus 270 l~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~ 346 (780)
.+ .+. ...++.++|+|||.+.|.+... .....+++++ +++++++++||+.+.
T Consensus 187 ~~-----~~~---------------~~~~i~vi~ngvd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~G~l~~~ 241 (412)
T PRK10307 187 RE-----KGV---------------AAEKVIFFPNWSEVARFQPVAD-----ADVDALRAQLGLPDGKKIVLYSGNIGEK 241 (412)
T ss_pred HH-----cCC---------------CcccEEEECCCcCHhhcCCCCc-----cchHHHHHHcCCCCCCEEEEEcCccccc
Confidence 32 121 2346888999999988864311 1123456666 357899999999999
Q ss_pred CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHH
Q 003999 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (780)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~a 426 (780)
||+..+++|++++ +++|+++ |+++| +|+.. +++++++++.+ . ..|+|. |.++.+++..
T Consensus 242 kg~~~li~a~~~l-~~~~~~~----l~ivG-----~g~~~----~~l~~~~~~~~----l---~~v~f~-G~~~~~~~~~ 299 (412)
T PRK10307 242 QGLELVIDAARRL-RDRPDLI----FVICG-----QGGGK----ARLEKMAQCRG----L---PNVHFL-PLQPYDRLPA 299 (412)
T ss_pred cCHHHHHHHHHHh-ccCCCeE----EEEEC-----CChhH----HHHHHHHHHcC----C---CceEEe-CCCCHHHHHH
Confidence 9999999999876 4566654 88776 34433 33444554432 1 236654 6889999999
Q ss_pred HHHhcceeeeccCCcCCCcc----hhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCc--cccC-CCcEEECCCCH
Q 003999 427 YYAVAECCIVNAVRDGMNLV----PYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC--SPSL-SGAIRVNPWDI 499 (780)
Q Consensus 427 ly~~ADv~vvtS~rEGmnLv----~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l-~~al~VnP~d~ 499 (780)
+|+.||++++||..|+++++ .+|||||| .|+|+|..+|. .+.+ ..|++++|.|+
T Consensus 300 ~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-------------------~PVi~s~~~g~~~~~~i~~~G~~~~~~d~ 360 (412)
T PRK10307 300 LLKMADCHLLPQKAGAADLVLPSKLTNMLASG-------------------RNVVATAEPGTELGQLVEGIGVCVEPESV 360 (412)
T ss_pred HHHhcCEeEEeeccCcccccCcHHHHHHHHcC-------------------CCEEEEeCCCchHHHHHhCCcEEeCCCCH
Confidence 99999999999999996544 69999997 48899988774 3444 46999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhhHhh-hCCHHHHHHHHHHHHHHH
Q 003999 500 DAVADAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWARSFAQDLERA 547 (780)
Q Consensus 500 ~~~A~ai~~aL~m~~~er~~r~~~~~~~V~-~~~~~~Wa~~~l~~l~~~ 547 (780)
+++|++|.++++++. ++....++.++++. .+|+...+++|++.+++.
T Consensus 361 ~~la~~i~~l~~~~~-~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 408 (412)
T PRK10307 361 EALVAAIAALARQAL-LRPKLGTVAREYAERTLDKENVLRQFIADIRGL 408 (412)
T ss_pred HHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 999999999998753 56666677888886 589999999999888765
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.8e-19 Score=198.14 Aligned_cols=347 Identities=13% Similarity=0.156 Sum_probs=205.1
Q ss_pred cccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEE
Q 003999 151 KQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFL 229 (780)
Q Consensus 151 ~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~-~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~fl 229 (780)
+.-||-.|+--.+. ....+++..-=.|.. ..|-..+.+. .....|++|.|||+.-....+||++.++++.+|+.
T Consensus 105 ~~~lW~~~~i~s~~---~~~d~nea~~fgy~~--~~~i~~~~~~~~~~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTt 179 (590)
T cd03793 105 KGELWELCGIGSPE---GDRETNDAIIFGFLV--AWFLGEFAEQFDDEPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTT 179 (590)
T ss_pred HHHHHHHcCCCCCC---CCCcchHHHHHHHHH--HHHHHHHHhhccCCCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEe
Confidence 44689888875433 113344433333431 1111122222 11235999999999999999999888999999999
Q ss_pred eCCCCChhHhhcCCCh-HHH-----------------------HH--hhhcCCEEEeecHHHHHHHHHHHHhhhCceecc
Q 003999 230 HSPFPSSEIYRTLPVR-DEI-----------------------LR--GLLNCDLIGFHTFDYARHFLSCCSRMLGLDYES 283 (780)
Q Consensus 230 H~PfP~~e~~~~lp~r-~ei-----------------------l~--~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~ 283 (780)
|..- +-|.+-.. ..+ ++ ....||.+.-.+..-++ -|..+
T Consensus 180 HAT~----~GR~l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~----E~~~L------- 244 (590)
T cd03793 180 HATL----LGRYLCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAY----EAEHL------- 244 (590)
T ss_pred cccc----cccccccCCcccchhhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHH----HHHHH-------
Confidence 9543 33321100 000 11 11123333322221110 11122
Q ss_pred CCceeEEEEcCeEEEEEEeecCCCchhhhhhcCC----chhHHHHHH-----HHHHc---CCCeEEEE-eccccc-cCCh
Q 003999 284 KRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNL----PATATKIKE-----IEKQF---DGKKLILG-IDDMDI-FKGI 349 (780)
Q Consensus 284 ~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~----~~~~~~~~~-----lr~~~---~~~~vil~-Vdrld~-~KGi 349 (780)
.++...+ |+|+|||++.|.+.... ....+++.+ ++.+| ++++++++ +||+++ .||+
T Consensus 245 ---------l~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGi 314 (590)
T cd03793 245 ---------LKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGA 314 (590)
T ss_pred ---------hCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCH
Confidence 2233223 89999999998754210 011122222 35554 37788888 899999 9999
Q ss_pred HHHHHHHHHHHHhCCC-CCCceEEEEEEcCCCCCh---------hHHHHHHHHHHHHHHHHhhc----------------
Q 003999 350 SLKLLAMEQLLQQHPG-MRGKVVLVQIVNPARGSG---------KDVQEAKKETYLTAKRINEV---------------- 403 (780)
Q Consensus 350 ~~~l~A~~~ll~~~P~-~~~~vvLvqi~~p~r~~~---------~~~~~l~~ei~~lv~~In~~---------------- 403 (780)
+.+|+|+.++-..--. -.++.|+..+..|+...+ .-.+++++.+.++.++|+.+
T Consensus 315 DvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~ 394 (590)
T cd03793 315 DMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEEL 394 (590)
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhh
Confidence 9999999987441111 012223333445665332 22345666666666666554
Q ss_pred ----------------------------------------------cC-CCCcccEEEecCCCC------HHHHHHHHHh
Q 003999 404 ----------------------------------------------YG-SPNYEPVVLIDRPVP------RFEKSAYYAV 430 (780)
Q Consensus 404 ----------------------------------------------~g-~~~~~pV~~~~~~v~------~~el~aly~~ 430 (780)
|. ..+...|+|....++ ..+...+|+.
T Consensus 395 ~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g 474 (590)
T cd03793 395 LDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRG 474 (590)
T ss_pred cchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhh
Confidence 10 012223554443332 2458889999
Q ss_pred cceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc----ccCC----CcEEEC-------
Q 003999 431 AECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS----PSLS----GAIRVN------- 495 (780)
Q Consensus 431 ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l~----~al~Vn------- 495 (780)
||++|+||.+||||++++|||||| .|+|+|..+|.. +.+. .|+.|.
T Consensus 475 ~dl~v~PS~yE~fG~~~lEAma~G-------------------~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~ 535 (590)
T cd03793 475 CHLGVFPSYYEPWGYTPAECTVMG-------------------IPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSP 535 (590)
T ss_pred ceEEEeccccCCCCcHHHHHHHcC-------------------CCEEEccCcchhhhhHHHhccCCCceEEEecCCccch
Confidence 999999999999999999999997 589999999883 3332 378887
Q ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHH
Q 003999 496 PWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (780)
Q Consensus 496 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~ 546 (780)
|.+++++|++|.+.++++..++........+....++|.+-+..+++.-.-
T Consensus 536 ~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 536 DESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 566889999999999776443333222233556668888877777765443
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.4e-19 Score=192.50 Aligned_cols=283 Identities=20% Similarity=0.247 Sum_probs=193.0
Q ss_pred HHHcCCCCCEEEEeCCccchHH---HHHHH--hcCCCcEEEEEeCCCCChhHhhcCCChHHHHHh-hhcCCEEEeecHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLP---TFLRK--RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRG-LLNCDLIGFHTFDY 265 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp---~~lr~--~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~-ll~~Dligf~t~~y 265 (780)
....++ |+|++|+++-...| ..+.. +..+.++.+.+|.+.+.... .....+.+. +-.+|.|-+.+.+.
T Consensus 72 ~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----~~~~~~~~~~~~~~d~ii~~s~~~ 145 (366)
T cd03822 72 IRLSGP--DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPR----PGDRALLRLLLRRADAVIVMSSEL 145 (366)
T ss_pred HhhcCC--CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccc----hhhhHHHHHHHhcCCEEEEeeHHH
Confidence 334444 89999883322111 11111 23678999999986222111 112222222 34689999887555
Q ss_pred HHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccc
Q 003999 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDI 345 (780)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~ 345 (780)
+++++... . ..++.++|+|++...+.... . .++ .....++.+++++||+.+
T Consensus 146 ~~~~~~~~-------------------~--~~~~~~i~~~~~~~~~~~~~------~-~~~-~~~~~~~~~i~~~G~~~~ 196 (366)
T cd03822 146 LRALLLRA-------------------Y--PEKIAVIPHGVPDPPAEPPE------S-LKA-LGGLDGRPVLLTFGLLRP 196 (366)
T ss_pred HHHHHhhc-------------------C--CCcEEEeCCCCcCcccCCch------h-hHh-hcCCCCCeEEEEEeeccC
Confidence 55554210 0 23678899999987664321 1 111 112257889999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+..+++|++.+.+++|+++ |+.+|... +.....+.+..+++.+. +.. ..|.++++.++.+++.
T Consensus 197 ~K~~~~ll~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~~----~~~--~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 197 YKGLELLLEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAERL----GLA--DRVIFINRYLPDEELP 262 (366)
T ss_pred CCCHHHHHHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHhc----CCC--CcEEEecCcCCHHHHH
Confidence 9999999999999998888766 87776421 11111111111223332 211 1366666559999999
Q ss_pred HHHHhcceeeeccCCc--CCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECCCCHH
Q 003999 426 AYYAVAECCIVNAVRD--GMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDID 500 (780)
Q Consensus 426 aly~~ADv~vvtS~rE--GmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~ 500 (780)
.+|+.||++++||..| |++++++|||+|| .|+|+|..+| .+.+ . .|++++|.|++
T Consensus 263 ~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G-------------------~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~ 322 (366)
T cd03822 263 ELFSAADVVVLPYRSADQTQSGVLAYAIGFG-------------------KPVISTPVGH-AEEVLDGGTGLLVPPGDPA 322 (366)
T ss_pred HHHhhcCEEEecccccccccchHHHHHHHcC-------------------CCEEecCCCC-hheeeeCCCcEEEcCCCHH
Confidence 9999999999999999 9999999999997 4899999888 6666 2 48999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHH
Q 003999 501 AVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDL 544 (780)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l 544 (780)
++|++|.++++.++ ++....++.++++.++++..+++.+.+-+
T Consensus 323 ~~~~~l~~l~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 323 ALAEAIRRLLADPE-LAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHHHHHHcChH-HHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 99999999999764 45556677888998899999999887643
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.6e-19 Score=196.48 Aligned_cols=281 Identities=17% Similarity=0.124 Sum_probs=185.9
Q ss_pred CCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHH---------hhhcCCEEEeecHHHHHH
Q 003999 198 DDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILR---------GLLNCDLIGFHTFDYARH 268 (780)
Q Consensus 198 ~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~---------~ll~~Dligf~t~~y~~~ 268 (780)
..|+|++|+.... ++ +++.. ...+++|..|.| .......-.+...+.+ .+-.+|.|...+......
T Consensus 94 ~~Dvi~~~~~~~~-~~-~~~~~-~~~~~i~~~h~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~ 168 (392)
T cd03805 94 KYDVFIVDQVSAC-VP-LLKLF-SPSKILFYCHFP--DQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASV 168 (392)
T ss_pred CCCEEEEcCcchH-HH-HHHHh-cCCcEEEEEecC--hHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHH
Confidence 3599999986643 22 33332 338999999954 2211110011111111 133478887766654443
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCC
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKG 348 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KG 348 (780)
+... ++. .....+.++|+|+|.+.|.+....+ ..+.....+++.+++++||+++.||
T Consensus 169 ~~~~----~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg 225 (392)
T cd03805 169 FKKT----FPS--------------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKN 225 (392)
T ss_pred HHHH----hcc--------------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCC
Confidence 3321 110 0111235789999998886432110 0111112257789999999999999
Q ss_pred hHHHHHHHHHHHHhC---CCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHH-HhhccCCCCcccEEEecCCCCHHHH
Q 003999 349 ISLKLLAMEQLLQQH---PGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKR-INEVYGSPNYEPVVLIDRPVPRFEK 424 (780)
Q Consensus 349 i~~~l~A~~~ll~~~---P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~-In~~~g~~~~~pV~~~~~~v~~~el 424 (780)
+..+++|++++.++. |+++ |+.+|.... ...+..++.+++++++++ .+.. ..|+| .|.++.+++
T Consensus 226 ~~~ll~a~~~l~~~~~~~~~~~----l~i~G~~~~-~~~~~~~~~~~l~~~~~~~~~l~------~~V~f-~g~~~~~~~ 293 (392)
T cd03805 226 IALAIEAFAILKDKLAEFKNVR----LVIAGGYDP-RVAENVEYLEELQRLAEELLLLE------DQVIF-LPSISDSQK 293 (392)
T ss_pred hHHHHHHHHHHHhhcccccCeE----EEEEcCCCC-CCchhHHHHHHHHHHHHHhcCCC------ceEEE-eCCCChHHH
Confidence 999999999998876 6655 887875331 112223444566666654 3211 13664 468999999
Q ss_pred HHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECCCCHHH
Q 003999 425 SAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDIDA 501 (780)
Q Consensus 425 ~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~~ 501 (780)
..+|+.||++++||..||||++++|||||| .|+|+|..+|..+.+ + .|++++| |+++
T Consensus 294 ~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-------------------~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~ 353 (392)
T cd03805 294 ELLLSSARALLYTPSNEHFGIVPLEAMYAG-------------------KPVIACNSGGPLETVVDGETGFLCEP-TPEE 353 (392)
T ss_pred HHHHhhCeEEEECCCcCCCCchHHHHHHcC-------------------CCEEEECCCCcHHHhccCCceEEeCC-CHHH
Confidence 999999999999999999999999999997 489999998888777 3 3788877 9999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHH
Q 003999 502 VADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARS 539 (780)
Q Consensus 502 ~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~ 539 (780)
+|++|.++++.++ +++.+.++.++++ ..+++...+++
T Consensus 354 ~a~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 354 FAEAMLKLANDPD-LADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHHHhChH-HHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 9999999999875 4555666677777 45787777654
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.8e-19 Score=210.88 Aligned_cols=280 Identities=13% Similarity=0.094 Sum_probs=183.2
Q ss_pred HHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEE-EEeCCCCC---hhHhhcCCChHHHHHhhhcCCEEEee--cHHHH
Q 003999 193 EVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGF-FLHSPFPS---SEIYRTLPVRDEILRGLLNCDLIGFH--TFDYA 266 (780)
Q Consensus 193 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~-flH~PfP~---~e~~~~lp~r~eil~~ll~~Dligf~--t~~y~ 266 (780)
+..+| |+|++|++.-.++..+..+. ..+|+++ .+|. +|. .+.++. ....+.+.+..++.+.+. +...+
T Consensus 397 k~~kp--DIVH~h~~~a~~lg~lAa~~-~gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~~ 470 (694)
T PRK15179 397 RSSVP--SVVHIWQDGSIFACALAALL-AGVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFAA 470 (694)
T ss_pred HHcCC--cEEEEeCCcHHHHHHHHHHH-cCCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHHH
Confidence 33355 99999999988777776654 4566654 5564 221 121110 011122333334433333 22222
Q ss_pred HHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcC-CCeEEEEeccccc
Q 003999 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFD-GKKLILGIDDMDI 345 (780)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~vil~Vdrld~ 345 (780)
+.+.. .++ ....+|.++|+|||...|.+. +........++...+ +.++|++|+|+++
T Consensus 471 ~~l~~----~~g---------------~~~~kI~VI~NGVd~~~f~~~---~~~~~~~~~~~~~~~~~~~vIg~VGRL~~ 528 (694)
T PRK15179 471 HRYAD----WLG---------------VDERRIPVVYNGLAPLKSVQD---DACTAMMAQFDARTSDARFTVGTVMRVDD 528 (694)
T ss_pred HHHHH----HcC---------------CChhHEEEECCCcCHHhcCCC---chhhHHHHhhccccCCCCeEEEEEEeCCc
Confidence 33322 112 123478899999999887531 211111122222233 4678999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+..+++||.++++++|+++ |+++|. |+. +.++++++++.+.. ..|+ |.|.. .++.
T Consensus 529 ~KG~~~LI~A~a~l~~~~p~~~----LvIvG~-----G~~----~~~L~~l~~~lgL~------~~V~-flG~~--~dv~ 586 (694)
T PRK15179 529 NKRPFLWVEAAQRFAASHPKVR----FIMVGG-----GPL----LESVREFAQRLGMG------ERIL-FTGLS--RRVG 586 (694)
T ss_pred cCCHHHHHHHHHHHHHHCcCeE----EEEEcc-----Ccc----hHHHHHHHHHcCCC------CcEE-EcCCc--chHH
Confidence 9999999999999999999876 887873 333 23455565554321 1255 45554 4799
Q ss_pred HHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECCCCH--H
Q 003999 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDI--D 500 (780)
Q Consensus 426 aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~--~ 500 (780)
.+|+.||++|+||.+|||+++++|||+|| .|+|+|..+|+.+.+ + +|++|+|.|. +
T Consensus 587 ~ll~aaDv~VlpS~~Egfp~vlLEAMA~G-------------------~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~ 647 (694)
T PRK15179 587 YWLTQFNAFLLLSRFEGLPNVLIEAQFSG-------------------VPVVTTLAGGAGEAVQEGVTGLTLPADTVTAP 647 (694)
T ss_pred HHHHhcCEEEeccccccchHHHHHHHHcC-------------------CeEEEECCCChHHHccCCCCEEEeCCCCCChH
Confidence 99999999999999999999999999997 489999999988888 3 4899998875 6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHH
Q 003999 501 AVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQ 542 (780)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~ 542 (780)
+++++|.+++....... ...++.++++ ..+++..-++.+++
T Consensus 648 ~La~aL~~ll~~l~~~~-~l~~~ar~~a~~~FS~~~~~~~~~~ 689 (694)
T PRK15179 648 DVAEALARIHDMCAADP-GIARKAADWASARFSLNQMIASTVR 689 (694)
T ss_pred HHHHHHHHHHhChhccH-HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 89999999887654322 2334567776 46888777776664
|
|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-19 Score=195.43 Aligned_cols=273 Identities=17% Similarity=0.152 Sum_probs=195.5
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCCh--hHhhc---CCChHHHHHhhhcCCEEEeecHHHHHHHHHHH
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS--EIYRT---LPVRDEILRGLLNCDLIGFHTFDYARHFLSCC 273 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~--e~~~~---lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~ 273 (780)
-|+||+|.+..... +..+.++++.+|..+|.. +.+.. ...+......+..+|.+.+.+...++.+.+..
T Consensus 86 ~Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~ 159 (365)
T cd03809 86 LDLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDLLRYL 159 (365)
T ss_pred CCeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHHHHHh
Confidence 39999999877765 456889999999765422 11110 11222334456678999998887666665421
Q ss_pred HhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHH
Q 003999 274 SRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKL 353 (780)
Q Consensus 274 ~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l 353 (780)
+. ...++.++|+|+|...+.... . .. ........++++|+++||+.+.||+...+
T Consensus 160 ----~~---------------~~~~~~vi~~~~~~~~~~~~~---~--~~-~~~~~~~~~~~~i~~~G~~~~~K~~~~~l 214 (365)
T cd03809 160 ----GV---------------PPDKIVVIPLGVDPRFRPPPA---E--AE-VLRALYLLPRPYFLYVGTIEPRKNLERLL 214 (365)
T ss_pred ----Cc---------------CHHHEEeeccccCccccCCCc---h--HH-HHHHhcCCCCCeEEEeCCCccccCHHHHH
Confidence 11 123578899999988775421 1 11 11112235788999999999999999999
Q ss_pred HHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcce
Q 003999 354 LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAEC 433 (780)
Q Consensus 354 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 433 (780)
+|+..+.+.+|+++ |+.+|... ........++ .+. +. ...+.+.+.++.+++..+|+.||+
T Consensus 215 ~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~----~~~----~~---~~~v~~~g~~~~~~~~~~~~~~d~ 275 (365)
T cd03809 215 EAFARLPAKGPDPK----LVIVGKRG----WLNEELLARL----REL----GL---GDRVRFLGYVSDEELAALYRGARA 275 (365)
T ss_pred HHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHH----HHc----CC---CCeEEECCCCChhHHHHHHhhhhh
Confidence 99999998888655 77776432 1111221211 111 21 123446679999999999999999
Q ss_pred eeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-CCcEEECCCCHHHHHHHHHHHHcC
Q 003999 434 CIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINM 512 (780)
Q Consensus 434 ~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m 512 (780)
+++||..||+|++++|||+|| .|+|+|+.+|..+.+ .+++.++|.|+++++++|.++++.
T Consensus 276 ~l~ps~~e~~~~~~~Ea~a~G-------------------~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~l~~~ 336 (365)
T cd03809 276 FVFPSLYEGFGLPVLEAMACG-------------------TPVIASNISSLPEVAGDAALYFDPLDPEALAAAIERLLED 336 (365)
T ss_pred hcccchhccCCCCHHHHhcCC-------------------CcEEecCCCCccceecCceeeeCCCCHHHHHHHHHHHhcC
Confidence 999999999999999999997 488999988877777 468999999999999999999876
Q ss_pred CHHHHHHHHHHHhhHhhhCCHHHHHHHHH
Q 003999 513 RDSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (780)
Q Consensus 513 ~~~er~~r~~~~~~~V~~~~~~~Wa~~~l 541 (780)
++ .+....+..++++.++++..++++++
T Consensus 337 ~~-~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 337 PA-LREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred HH-HHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 54 45555566778889999999998875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.1e-19 Score=199.66 Aligned_cols=314 Identities=13% Similarity=0.125 Sum_probs=207.5
Q ss_pred ccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCc-cchHHHHHHHhcCCCcEE
Q 003999 148 GFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYH-LMVLPTFLRKRFNRIKLG 226 (780)
Q Consensus 148 gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyh-l~llp~~lr~~~~~~~i~ 226 (780)
.+-..-.||-||-.-. .-+..|-++..+.+ .. |.|||-.-- ..-+| ++| +...||+
T Consensus 108 ~~~~~~~~~~~t~~~~--------~~~~~~l~~~~~~~---------~~---p~v~vDt~~~~~~~p-l~~--~~~~~v~ 164 (463)
T PLN02949 108 KWIEEETYPRFTMIGQ--------SLGSVYLAWEALCK---------FT---PLYFFDTSGYAFTYP-LAR--LFGCKVV 164 (463)
T ss_pred cccccccCCceehHHH--------HHHHHHHHHHHHHh---------cC---CCEEEeCCCcccHHH-HHH--hcCCcEE
Confidence 3445667777776532 22566666664432 12 347774321 12223 344 3478999
Q ss_pred EEEeCCCCChhHhhcCCCh-------------------HH----H---HHh--hhcCCEEEeecHHHHHHHHHHHHhhhC
Q 003999 227 FFLHSPFPSSEIYRTLPVR-------------------DE----I---LRG--LLNCDLIGFHTFDYARHFLSCCSRMLG 278 (780)
Q Consensus 227 ~flH~PfP~~e~~~~lp~r-------------------~e----i---l~~--ll~~Dligf~t~~y~~~Fl~~~~r~l~ 278 (780)
+.+|-|.-+.++...+-.+ +. . +.. +-.+|.|...+....+++.+. .+
T Consensus 165 ~yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~~----~~ 240 (463)
T PLN02949 165 CYTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEAL----WR 240 (463)
T ss_pred EEEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHHH----cC
Confidence 9999876665444322100 00 0 111 235788877766555555321 11
Q ss_pred ceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHH
Q 003999 279 LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQ 358 (780)
Q Consensus 279 ~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ 358 (780)
...+++++++|+|...+... +. +...+++++++|+|+.+.||+..+|+||.+
T Consensus 241 ----------------~~~~i~vvyp~vd~~~~~~~---~~---------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~ 292 (463)
T PLN02949 241 ----------------IPERIKRVYPPCDTSGLQAL---PL---------ERSEDPPYIISVAQFRPEKAHALQLEAFAL 292 (463)
T ss_pred ----------------CCCCeEEEcCCCCHHHcccC---Cc---------cccCCCCEEEEEEeeeccCCHHHHHHHHHH
Confidence 11246778889998766321 10 011356789999999999999999999999
Q ss_pred HHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeecc
Q 003999 359 LLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNA 438 (780)
Q Consensus 359 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 438 (780)
++++.++-..++.|+++|... .++..+..+++++++++.+-. + .|.|+ +.++.+++.++|+.||+++.||
T Consensus 293 l~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l~L~----~--~V~f~-g~v~~~el~~ll~~a~~~v~~s 362 (463)
T PLN02949 293 ALEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKELGLD----G--DVEFH-KNVSYRDLVRLLGGAVAGLHSM 362 (463)
T ss_pred HHHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHcCCC----C--cEEEe-CCCCHHHHHHHHHhCcEEEeCC
Confidence 887543211234488888532 122223445666666654321 1 26654 6899999999999999999999
Q ss_pred CCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccc-cCC----C--cEEECCCCHHHHHHHHHHHHc
Q 003999 439 VRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSP-SLS----G--AIRVNPWDIDAVADAMTLAIN 511 (780)
Q Consensus 439 ~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-~l~----~--al~VnP~d~~~~A~ai~~aL~ 511 (780)
..||||++++|||||| .|+|+|..+|..+ .+. | |++++ |++++|++|.++++
T Consensus 363 ~~E~FGivvlEAMA~G-------------------~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~ 421 (463)
T PLN02949 363 IDEHFGISVVEYMAAG-------------------AVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLR 421 (463)
T ss_pred ccCCCChHHHHHHHcC-------------------CcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHh
Confidence 9999999999999996 4889998888653 332 2 67764 99999999999999
Q ss_pred CCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHH
Q 003999 512 MRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 512 m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
++++++++..++.++.+.++++..-++++++.++..
T Consensus 422 ~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l 457 (463)
T PLN02949 422 MRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPI 457 (463)
T ss_pred CCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 887777777777888899999999888888777765
|
|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.2e-18 Score=192.15 Aligned_cols=272 Identities=14% Similarity=0.103 Sum_probs=189.5
Q ss_pred CCCCCEEEEeCCccch-HHHHHHHhcCCCcEEEEEeCCCCChhHh--hcCCChHHHHHhhhcCCEEEeecHHHHHHHHHH
Q 003999 196 NPDDDCVWVHDYHLMV-LPTFLRKRFNRIKLGFFLHSPFPSSEIY--RTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (780)
Q Consensus 196 ~~~~DiVwvhDyhl~l-lp~~lr~~~~~~~i~~flH~PfP~~e~~--~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~ 272 (780)
+++.|+++.|-++... .-.+++++....+++...|-.....+.+ ..++.++.+ +-.+|.|.+.+....+.+.+.
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~ 201 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR 201 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH
Confidence 3445777776555443 3345667666666888899532111111 111222222 346899998888766554321
Q ss_pred HHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHH
Q 003999 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (780)
Q Consensus 273 ~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~ 352 (780)
.+ ....++.++|+|++...+... + ...++..|+++||+.+.||+..+
T Consensus 202 ----~~---------------~~~~ki~vi~~gv~~~~~~~~---~-----------~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 202 ----YP---------------AYKEKIKVSYLGVSDPGIISK---P-----------SKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred ----CC---------------CccccEEEEECCcccccccCC---C-----------CCCCCEEEEEeeccccccCHHHH
Confidence 11 123467889999998765431 0 11356789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHh--
Q 003999 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAV-- 430 (780)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~-- 430 (780)
++|+.++.+++|+.. +.++.+|. |++.++ +++++++. +.. ..|+ +.|.++.+|+.++|+.
T Consensus 249 i~a~~~l~~~~p~~~--l~~~iiG~-----g~~~~~----l~~~~~~~----~~~--~~V~-f~G~v~~~e~~~~~~~~~ 310 (407)
T cd04946 249 IKALAALAKARPSIK--IKWTHIGG-----GPLEDT----LKELAESK----PEN--ISVN-FTGELSNSEVYKLYKENP 310 (407)
T ss_pred HHHHHHHHHhCCCce--EEEEEEeC-----chHHHH----HHHHHHhc----CCC--ceEE-EecCCChHHHHHHHhhcC
Confidence 999999999988764 66776663 444333 34444322 111 1255 5679999999999986
Q ss_pred cceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECC-CCHHHHHHHH
Q 003999 431 AECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNP-WDIDAVADAM 506 (780)
Q Consensus 431 ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP-~d~~~~A~ai 506 (780)
||+++.||..|||+++++|||+|| .|+|+|..+|..+.+. .|++++| .|++++|++|
T Consensus 311 ~~v~v~~S~~Eg~p~~llEAma~G-------------------~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I 371 (407)
T cd04946 311 VDVFVNLSESEGLPVSIMEAMSFG-------------------IPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSL 371 (407)
T ss_pred CCEEEeCCccccccHHHHHHHHcC-------------------CCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHH
Confidence 788999999999999999999997 4899999999988883 3688876 5899999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHH
Q 003999 507 TLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFA 541 (780)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l 541 (780)
.++++.+ +++....++.++++ +.+++..+.++|+
T Consensus 372 ~~ll~~~-~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 372 SKFIDNE-EEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999855 45666667788887 4588888888775
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.6e-18 Score=186.28 Aligned_cols=281 Identities=17% Similarity=0.172 Sum_probs=192.6
Q ss_pred HHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhh-hcCCEEEeecHHHHHHHHH
Q 003999 193 EVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGL-LNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 193 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l-l~~Dligf~t~~y~~~Fl~ 271 (780)
+..+| |+|++|+++......++.......++.+..|..++...-. ..+....+.+-+ -.+|.+...+......+..
T Consensus 77 ~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 153 (365)
T cd03807 77 RRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLGKK-STRLVARLRRLLSSFIPLIVANSAAAAEYHQA 153 (365)
T ss_pred HhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCcccccch-hHhHHHHHHHHhccccCeEEeccHHHHHHHHH
Confidence 34455 8999999998777777666546789999999876542100 001111222222 2357765555543333321
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCC
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKG 348 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KG 348 (780)
. +. ...++.++|+|+|...+..... ....+++++ .++.+++++||+++.||
T Consensus 154 ~-----~~---------------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K~ 207 (365)
T cd03807 154 I-----GY---------------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQKD 207 (365)
T ss_pred c-----CC---------------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhcC
Confidence 0 11 1235778999999887754321 112334445 46788999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHH
Q 003999 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (780)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 428 (780)
+..+++|+..+.+++|+++ |+.+|... ..... ..... ...+.. ..|.++ +. .+++..+|
T Consensus 208 ~~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~----~~~~~---~~~~~~--~~v~~~-g~--~~~~~~~~ 266 (365)
T cd03807 208 HATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANL----ELLAL---KELGLE--DKVILL-GE--RSDVPALL 266 (365)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHH----HHHHH---HhcCCC--ceEEEc-cc--cccHHHHH
Confidence 9999999999988888765 77776432 21222 22222 011211 125444 43 46899999
Q ss_pred HhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC-CcEEECCCCHHHHHHHHH
Q 003999 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-GAIRVNPWDIDAVADAMT 507 (780)
Q Consensus 429 ~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~al~VnP~d~~~~A~ai~ 507 (780)
+.||++++||..||+|++++|||+|| .|+|+|..+|..+.+. .|+++++.|+++++++|.
T Consensus 267 ~~adi~v~ps~~e~~~~~~~Ea~a~g-------------------~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i~ 327 (365)
T cd03807 267 NALDVFVLSSLSEGFPNVLLEAMACG-------------------LPVVATDVGDNAELVGDTGFLVPPGDPEALAEAIE 327 (365)
T ss_pred HhCCEEEeCCccccCCcHHHHHHhcC-------------------CCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHHH
Confidence 99999999999999999999999997 4899999998888774 589999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHhhHhhh-CCHHHHHHHHHHH
Q 003999 508 LAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQD 543 (780)
Q Consensus 508 ~aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~~~l~~ 543 (780)
+++++++ ++....+..++++.+ +++..-++.+.+-
T Consensus 328 ~l~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 328 ALLADPA-LRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHhChH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999874 555666677777754 8888888877754
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.7e-18 Score=186.58 Aligned_cols=264 Identities=17% Similarity=0.145 Sum_probs=188.8
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhC
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLG 278 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~ 278 (780)
.|+|++|..+...+..++..+....+..+.+|.+..... +....+-+.+-.+|.+-..+....+.+.+. .+
T Consensus 80 ~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~vi~~s~~~~~~l~~~----~~ 150 (355)
T cd03799 80 IDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRS-----PDAIDLDEKLARADFVVAISEYNRQQLIRL----LG 150 (355)
T ss_pred CCEEEECCCCchHHHHHHHHHhcCCCEEEEEeccccccc-----CchHHHHHHHhhCCEEEECCHHHHHHHHHh----cC
Confidence 399999987665555666666567899999996432111 111223334557999999888776665431 11
Q ss_pred ceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHH
Q 003999 279 LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQ 358 (780)
Q Consensus 279 ~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ 358 (780)
....++.++|+|+|.+.+.... .....++..|+++||+.+.||+..+++|+++
T Consensus 151 ---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~ 203 (355)
T cd03799 151 ---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYLLEALAL 203 (355)
T ss_pred ---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHHHHHHHH
Confidence 1234688999999988775421 0122457789999999999999999999999
Q ss_pred HHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeecc
Q 003999 359 LLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNA 438 (780)
Q Consensus 359 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 438 (780)
+.++.|+++ |+.+|. ++.. .++.+.+++.+. .+.+.+.+.++.+++.++|+.||++++||
T Consensus 204 l~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~-------~~~v~~~g~~~~~~l~~~~~~adi~l~~s 263 (355)
T cd03799 204 LKDRGIDFR----LDIVGD-----GPLR----DELEALIAELGL-------EDRVTLLGAKSQEEVRELLRAADLFVLPS 263 (355)
T ss_pred HhhcCCCeE----EEEEEC-----CccH----HHHHHHHHHcCC-------CCeEEECCcCChHHHHHHHHhCCEEEecc
Confidence 987766654 777763 2222 233444444321 12344567899999999999999999999
Q ss_pred CC------cCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHHHHH
Q 003999 439 VR------DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLA 509 (780)
Q Consensus 439 ~r------EGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~a 509 (780)
.. ||||++.+|||+|| .|+|+|..+|..+.+. .|++++|.|++++|++|.++
T Consensus 264 ~~~~~~~~e~~~~~~~Ea~a~G-------------------~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~~ 324 (355)
T cd03799 264 VTAADGDREGLPVVLMEAMAMG-------------------LPVISTDVSGIPELVEDGETGLLVPPGDPEALADAIERL 324 (355)
T ss_pred eecCCCCccCccHHHHHHHHcC-------------------CCEEecCCCCcchhhhCCCceEEeCCCCHHHHHHHHHHH
Confidence 99 99999999999997 4889998877776663 48999999999999999999
Q ss_pred HcCCHHHHHHHHHHHhhHhh-hCCHHHHHH
Q 003999 510 INMRDSEKQLRHEKHYRYVS-THDVAYWAR 538 (780)
Q Consensus 510 L~m~~~er~~r~~~~~~~V~-~~~~~~Wa~ 538 (780)
++++. ++....+..++++. .+++...++
T Consensus 325 ~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 325 LDDPE-LRREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred HhCHH-HHHHHHHHHHHHHHHhcCHHHHhh
Confidence 99765 35555556677774 467666554
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.5e-18 Score=187.08 Aligned_cols=274 Identities=18% Similarity=0.193 Sum_probs=182.5
Q ss_pred CCEEEEeCCcc-chHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHH------HHhhhcCCEEEeecHHHHHHHHH
Q 003999 199 DDCVWVHDYHL-MVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEI------LRGLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 199 ~DiVwvhDyhl-~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~ei------l~~ll~~Dligf~t~~y~~~Fl~ 271 (780)
.|+|++|+... ...+.....+..+.++.+..|..++..... .-+.+..+ -..+..+|.+.+.+.........
T Consensus 88 ~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~ 166 (375)
T cd03821 88 ADIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALP-HKALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR 166 (375)
T ss_pred CCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccc-cchhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh
Confidence 49999998432 222222222235788999999776543210 00111111 11133467777666443322211
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCC
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKG 348 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KG 348 (780)
.+...++.++|+|+|.+.+.... .. .. ++++ .++++++++||+++.||
T Consensus 167 ---------------------~~~~~~~~vi~~~~~~~~~~~~~---~~----~~-~~~~~~~~~~~~i~~~G~~~~~K~ 217 (375)
T cd03821 167 ---------------------LGLKAPIAVIPNGVDIPPFAALP---SR----GR-RRKFPILPDKRIILFLGRLHPKKG 217 (375)
T ss_pred ---------------------hCCcccEEEcCCCcChhccCcch---hh----hh-hhhccCCCCCcEEEEEeCcchhcC
Confidence 11234678999999998875421 11 11 3333 46789999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHH
Q 003999 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (780)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 428 (780)
+..+++|+.++.+++|+++ |+.+|... ..+. ..++.++.+. +.. ..|. +.+.++.+++..+|
T Consensus 218 ~~~li~a~~~l~~~~~~~~----l~i~G~~~----~~~~---~~~~~~~~~~----~~~--~~v~-~~g~~~~~~~~~~~ 279 (375)
T cd03821 218 LDLLIEAFAKLAERFPDWH----LVIAGPDE----GGYR---AELKQIAAAL----GLE--DRVT-FTGMLYGEDKAAAL 279 (375)
T ss_pred HHHHHHHHHHhhhhcCCeE----EEEECCCC----cchH---HHHHHHHHhc----Ccc--ceEE-EcCCCChHHHHHHH
Confidence 9999999999998888876 77777421 1221 2223333332 211 1254 56789999999999
Q ss_pred HhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC-C-cEEECCCCHHHHHHHH
Q 003999 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-G-AIRVNPWDIDAVADAM 506 (780)
Q Consensus 429 ~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-al~VnP~d~~~~A~ai 506 (780)
+.||++++||..||||++++|||+|| .|+|+|..+|..+.+. + ++++ |.+.++++++|
T Consensus 280 ~~adv~v~ps~~e~~~~~~~Eama~G-------------------~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i 339 (375)
T cd03821 280 ADADLFVLPSHSENFGIVVAEALACG-------------------TPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAAL 339 (375)
T ss_pred hhCCEEEeccccCCCCcHHHHHHhcC-------------------CCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHH
Confidence 99999999999999999999999997 4899999988887773 3 4555 45669999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhH-hhhCCHHHHHHHHH
Q 003999 507 TLAINMRDSEKQLRHEKHYRY-VSTHDVAYWARSFA 541 (780)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~-V~~~~~~~Wa~~~l 541 (780)
.++++++ +++....++.+++ ...+++..-++.++
T Consensus 340 ~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 340 RRALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999987 4566666777777 46688777777654
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.1e-18 Score=196.08 Aligned_cols=271 Identities=14% Similarity=0.079 Sum_probs=181.5
Q ss_pred CCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCCh-hHhhcC----CChHHHHHhhhcCCEEEeecHHHHHHHHHH
Q 003999 198 DDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS-EIYRTL----PVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (780)
Q Consensus 198 ~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~-e~~~~l----p~r~eil~~ll~~Dligf~t~~y~~~Fl~~ 272 (780)
+.|+++++--+... +.++ +..+.++++.++|.-.-+. ..-... +.-+..++.+-.+|.|...|..-.+.....
T Consensus 211 ~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 45898887555433 3344 5567899999999643110 000000 111223344445688877776544333321
Q ss_pred HHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHH
Q 003999 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (780)
Q Consensus 273 ~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~ 352 (780)
... +.+...+|.++|+|++...+.+ . ....+..|++|||+.+.||+..+
T Consensus 289 ~~~----------------~~~~~~ki~viP~g~~~~~~~~-----~----------~~r~~~~il~vGrl~~~Kg~~~l 337 (500)
T TIGR02918 289 FKK----------------YYNIEPRIYTIPVGSLDELQYP-----E----------QERKPFSIITASRLAKEKHIDWL 337 (500)
T ss_pred hhh----------------hcCCCCcEEEEcCCCcccccCc-----c----------cccCCeEEEEEeccccccCHHHH
Confidence 111 1222346788999987543321 0 01234689999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcc
Q 003999 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (780)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 432 (780)
++|+.++.+++|+++ |+++|. |++. +++++++++.+. .+ .|.+ .|.. ++..+|+.||
T Consensus 338 i~A~~~l~~~~p~~~----l~i~G~-----G~~~----~~l~~~i~~~~l----~~--~V~f-~G~~---~~~~~~~~ad 394 (500)
T TIGR02918 338 VKAVVKAKKSVPELT----FDIYGE-----GGEK----QKLQKIINENQA----QD--YIHL-KGHR---NLSEVYKDYE 394 (500)
T ss_pred HHHHHHHHhhCCCeE----EEEEEC-----chhH----HHHHHHHHHcCC----CC--eEEE-cCCC---CHHHHHHhCC
Confidence 999999999999876 877763 4433 345556555432 11 2554 4443 6788999999
Q ss_pred eeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCC-CccccC-C--CcEEECC----CC----HH
Q 003999 433 CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFI-GCSPSL-S--GAIRVNP----WD----ID 500 (780)
Q Consensus 433 v~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l-~--~al~VnP----~d----~~ 500 (780)
++|+||.+||||++++|||||| .|+|+|... |.++.+ + +|++|+| .| ++
T Consensus 395 v~v~pS~~Egfgl~~lEAma~G-------------------~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~ 455 (500)
T TIGR02918 395 LYLSASTSEGFGLTLMEAVGSG-------------------LGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIIT 455 (500)
T ss_pred EEEEcCccccccHHHHHHHHhC-------------------CCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHH
Confidence 9999999999999999999997 489999986 666666 3 4899974 34 89
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHH
Q 003999 501 AVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (780)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~ 545 (780)
++|++|.++|+ + .+++...+..++.+.++++..-++.+.+-++
T Consensus 456 ~la~~I~~ll~-~-~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 456 ALAEKIVEYFN-S-NDIDAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHhC-h-HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 99999999994 3 3566666778888888888887777765554
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.82 E-value=4e-18 Score=183.87 Aligned_cols=283 Identities=20% Similarity=0.184 Sum_probs=200.4
Q ss_pred HHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhh----cCCChHHHHHhhhcCCEEEeecHHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR----TLPVRDEILRGLLNCDLIGFHTFDYA 266 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~----~lp~r~eil~~ll~~Dligf~t~~y~ 266 (780)
+.+..++ |+|++|+++...+.. +..+.++.++++.+|.+++...... ...........+..+|.+.+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 3344455 899999999887665 4445678999999999887532110 00111122233446899988887666
Q ss_pred HHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccc
Q 003999 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDM 343 (780)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrl 343 (780)
+.+.+. +.....++.++|+|+|...+.... ...+... .+++.++++||+
T Consensus 157 ~~~~~~-------------------~~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~g~~ 208 (374)
T cd03801 157 EELREL-------------------GGVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFVGRL 208 (374)
T ss_pred HHHHhc-------------------CCCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEecch
Confidence 655431 011124688899999988775321 1111222 467899999999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHH
Q 003999 344 DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFE 423 (780)
Q Consensus 344 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~e 423 (780)
++.||+..+++|+..+.+++|+++ |+.+|. ++....+ .+++++.+. . ..|. +.+.++.+|
T Consensus 209 ~~~k~~~~~i~~~~~~~~~~~~~~----l~i~G~-----~~~~~~~----~~~~~~~~~----~--~~v~-~~g~~~~~~ 268 (374)
T cd03801 209 VPRKGVDLLLEALAKLRKEYPDVR----LVIVGD-----GPLREEL----EALAAELGL----G--DRVT-FLGFVPDED 268 (374)
T ss_pred hhhcCHHHHHHHHHHHhhhcCCeE----EEEEeC-----cHHHHHH----HHHHHHhCC----C--cceE-EEeccChhh
Confidence 999999999999999988887655 877762 3333333 333333221 1 1355 557899999
Q ss_pred HHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHH
Q 003999 424 KSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDID 500 (780)
Q Consensus 424 l~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~ 500 (780)
+..+|+.||++++|+..||++++++|||+|| .|+|+|...|..+.+. .|+++++.|++
T Consensus 269 ~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g-------------------~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~ 329 (374)
T cd03801 269 LPALYAAADVFVLPSLYEGFGLVLLEAMAAG-------------------LPVVASDVGGIPEVVEDGETGLLVPPGDPE 329 (374)
T ss_pred HHHHHHhcCEEEecchhccccchHHHHHHcC-------------------CcEEEeCCCChhHHhcCCcceEEeCCCCHH
Confidence 9999999999999999999999999999997 4899999988888774 48999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHh-hHhhhCCHHHHHHHHHHHH
Q 003999 501 AVADAMTLAINMRDSEKQLRHEKHY-RYVSTHDVAYWARSFAQDL 544 (780)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~-~~V~~~~~~~Wa~~~l~~l 544 (780)
+++++|.++++.++ .+....+..+ ...+.+++..+++.+++-+
T Consensus 330 ~l~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 330 ALAEAILRLLDDPE-LRRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHHHHcChH-HHHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 99999999998765 3444445555 4557799999998877643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.6e-18 Score=186.09 Aligned_cols=267 Identities=18% Similarity=0.260 Sum_probs=184.8
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChH---------HHHH-hhhcCCEEEee
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRD---------EILR-GLLNCDLIGFH 261 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~---------eil~-~ll~~Dligf~ 261 (780)
.+..+| |+|++|+...+........+..++++.+.+|.+|+. +....+... .+.+ .+..+|.+.+.
T Consensus 80 ~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~ 155 (374)
T cd03817 80 LKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYED--YTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAP 155 (374)
T ss_pred HhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHH--HHHHHhcccchhHHHHHHHHHHHHhhhCCEEEec
Confidence 444555 899999875544333333334578999999988763 222222111 1122 23468888888
Q ss_pred cHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEE
Q 003999 262 TFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLIL 338 (780)
Q Consensus 262 t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil 338 (780)
+......+.. .+ ...++.++|+|+|...+..... . ..++++ .++++|+
T Consensus 156 s~~~~~~~~~-----~~----------------~~~~~~vi~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~i~ 206 (374)
T cd03817 156 SEKIADLLRE-----YG----------------VKRPIEVIPTGIDLDRFEPVDG----D----DERRKLGIPEDEPVLL 206 (374)
T ss_pred cHHHHHHHHh-----cC----------------CCCceEEcCCccchhccCccch----h----HHHHhcCCCCCCeEEE
Confidence 8764444321 11 1224788999999887754211 1 112333 4678899
Q ss_pred EeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCC
Q 003999 339 GIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRP 418 (780)
Q Consensus 339 ~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~ 418 (780)
++||+.+.||+..+++|++.+.++.++++ |+.+|. ++.. .++.+++++.+.. ..|. +.+.
T Consensus 207 ~~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~~------~~v~-~~g~ 266 (374)
T cd03817 207 YVGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGD-----GPER----EELEELARELGLA------DRVI-FTGF 266 (374)
T ss_pred EEeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeC-----CchH----HHHHHHHHHcCCC------CcEE-Eecc
Confidence 99999999999999999999988767655 777763 2322 2344444433211 1254 5578
Q ss_pred CCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEEC
Q 003999 419 VPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVN 495 (780)
Q Consensus 419 v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~Vn 495 (780)
++.+++..+|+.||++++||..||+|++.+|||+|| .|+|+|..+|..+.+. +|++++
T Consensus 267 ~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g-------------------~PvI~~~~~~~~~~i~~~~~g~~~~ 327 (374)
T cd03817 267 VPREELPDYYKAADLFVFASTTETQGLVLLEAMAAG-------------------LPVVAVDAPGLPDLVADGENGFLFP 327 (374)
T ss_pred CChHHHHHHHHHcCEEEecccccCcChHHHHHHHcC-------------------CcEEEeCCCChhhheecCceeEEeC
Confidence 999999999999999999999999999999999996 4889999888887773 489999
Q ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCC
Q 003999 496 PWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHD 532 (780)
Q Consensus 496 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~ 532 (780)
+.|. +++++|.+++++++. ++...+..++++.+++
T Consensus 328 ~~~~-~~~~~i~~l~~~~~~-~~~~~~~~~~~~~~~~ 362 (374)
T cd03817 328 PGDE-ALAEALLRLLQDPEL-RRRLSKNAEESAEKFS 362 (374)
T ss_pred CCCH-HHHHHHHHHHhChHH-HHHHHHHHHHHHHHHH
Confidence 9888 999999999998764 4555566777777665
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.5e-19 Score=197.40 Aligned_cols=187 Identities=10% Similarity=0.006 Sum_probs=128.1
Q ss_pred EEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEecc-c-cccCChHHHHHHHHHHHHhCCCCCCceEEEE
Q 003999 297 VYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDD-M-DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (780)
Q Consensus 297 ~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdr-l-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (780)
.++.++|+|||++.+..... . ...+ .-+++++|++|+| + ++.||+..+++|+.++ .++ +.|++
T Consensus 212 ~~i~vI~NGid~~~~~~~~~---~----~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~~----~~L~i 276 (405)
T PRK10125 212 GRCRIINNGIDMATEAILAE---L----PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GDK----IELHT 276 (405)
T ss_pred CCEEEeCCCcCccccccccc---c----cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CCC----eEEEE
Confidence 36888999999754321100 0 0001 1256788999999 4 4789999999999875 233 45887
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcc
Q 003999 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 375 i~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
+|.. +... . ..|.++....+.+++..+|+.||+||+||..|||++|++||||||
T Consensus 277 vG~g-----~~~~-----------------~----~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G 330 (405)
T PRK10125 277 FGKF-----SPFT-----------------A----GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIG 330 (405)
T ss_pred EcCC-----Cccc-----------------c----cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcC
Confidence 7742 1100 0 124444323367899999999999999999999999999999997
Q ss_pred cCCCccccccccCCCCCCCceEEEcCCCCccccCC--CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhC
Q 003999 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STH 531 (780)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~ 531 (780)
.|+|+|..+|+.+.+. +|++|+|.|++++|++++..+... +.....+..++.+ ..+
T Consensus 331 -------------------~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~~--~~~~~~~~~r~~~~~~f 389 (405)
T PRK10125 331 -------------------VPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQA--VFGTTLAEFSQRSRAAY 389 (405)
T ss_pred -------------------CCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHHH--hhhhHHHHHHHHHHHhC
Confidence 5899999999888773 599999999999998654332211 0000123344444 558
Q ss_pred CHHHHHHHHHHHHH
Q 003999 532 DVAYWARSFAQDLE 545 (780)
Q Consensus 532 ~~~~Wa~~~l~~l~ 545 (780)
+....++.+++-.+
T Consensus 390 s~~~~~~~y~~lY~ 403 (405)
T PRK10125 390 SGQQMLEEYVNFYQ 403 (405)
T ss_pred CHHHHHHHHHHHHH
Confidence 88888888776543
|
|
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.3e-18 Score=185.94 Aligned_cols=275 Identities=19% Similarity=0.232 Sum_probs=193.8
Q ss_pred CCEEEEeC-CccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcC-CC-------hHHHHH-hhhcCCEEEeecHHHHHH
Q 003999 199 DDCVWVHD-YHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTL-PV-------RDEILR-GLLNCDLIGFHTFDYARH 268 (780)
Q Consensus 199 ~DiVwvhD-yhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~l-p~-------r~eil~-~ll~~Dligf~t~~y~~~ 268 (780)
-|+|++|. ..+..++....++..+.++.+.+|..||........ .. ...+.+ .+..+|.+.+.+...++.
T Consensus 100 ~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~~ 179 (394)
T cd03794 100 PDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISPGMREY 179 (394)
T ss_pred CCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECHHHHHH
Confidence 38999998 444455555555556889999999988754322111 11 111222 244689999999887776
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCC
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKG 348 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KG 348 (780)
+.. .+ ....++.++|+|++...+...... ..... .....++.+++++||+.+.||
T Consensus 180 ~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~i~~~G~~~~~k~ 234 (394)
T cd03794 180 LVR-----RG---------------VPPEKISVIPNGVDLELFKPPPAD----ESLRK-ELGLDDKFVVLYAGNIGRAQG 234 (394)
T ss_pred HHh-----cC---------------CCcCceEEcCCCCCHHHcCCccch----hhhhh-ccCCCCcEEEEEecCcccccC
Confidence 641 11 113367889999998877543211 10111 111257889999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHH
Q 003999 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (780)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 428 (780)
+..+++|+.++.+. |+++ |+.+|. ++....+++ ++.. .+ ...|.+++ .++.+++.++|
T Consensus 235 ~~~l~~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~~----~~~~----~~---~~~v~~~g-~~~~~~~~~~~ 292 (394)
T cd03794 235 LDTLLEAAALLKDR-PDIR----FLIVGD-----GPEKEELKE----LAKA----LG---LDNVTFLG-RVPKEELPELL 292 (394)
T ss_pred HHHHHHHHHHHhhc-CCeE----EEEeCC-----cccHHHHHH----HHHH----cC---CCcEEEeC-CCChHHHHHHH
Confidence 99999999998776 6655 776663 333333322 2211 11 23477664 89999999999
Q ss_pred HhcceeeeccCCcCC-----CcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHH
Q 003999 429 AVAECCIVNAVRDGM-----NLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDID 500 (780)
Q Consensus 429 ~~ADv~vvtS~rEGm-----nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~ 500 (780)
+.||++++||..|++ ++..+|||+|| .|+|+|..+|..+.+. .|+++++.|++
T Consensus 293 ~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G-------------------~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~ 353 (394)
T cd03794 293 AAADVGLVPLKPGPAFEGVSPSKLFEYMAAG-------------------KPVLASVDGESAELVEEAGAGLVVPPGDPE 353 (394)
T ss_pred HhhCeeEEeccCcccccccCchHHHHHHHCC-------------------CcEEEecCCCchhhhccCCcceEeCCCCHH
Confidence 999999999999876 56679999997 5899999999888873 48999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhHhh-hCCHHHHHHHH
Q 003999 501 AVADAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWARSF 540 (780)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~~~V~-~~~~~~Wa~~~ 540 (780)
+++++|.++++.++ ++....++.++++. .+++..+++.+
T Consensus 354 ~l~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 354 ALAAAILELLDDPE-ERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHHhChH-HHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 99999999997654 56666677788887 78998888765
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.7e-18 Score=185.27 Aligned_cols=274 Identities=16% Similarity=0.148 Sum_probs=191.3
Q ss_pred HHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCCh----HHHHHh-hhcCCEEEeecHHHHH
Q 003999 193 EVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVR----DEILRG-LLNCDLIGFHTFDYAR 267 (780)
Q Consensus 193 ~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r----~eil~~-ll~~Dligf~t~~y~~ 267 (780)
+..+| |+|++|...........-.+..++++.+++|..||..-........ ..+.+. .-.+|.+-+.+.....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 45566 8999997544322222222235788999999887632111111111 122222 3357888888776554
Q ss_pred HHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--CCCeEEEEeccccc
Q 003999 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMDI 345 (780)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~--~~~~vil~Vdrld~ 345 (780)
.+.. .+ ..++.++|+|+|...|.+.... ...++++ .++++++++||+.+
T Consensus 158 ~~~~--------------------~~--~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~i~~~G~~~~ 208 (364)
T cd03814 158 ELRA--------------------RG--FRRVRLWPRGVDTELFHPRRRD-------EALRARLGPPDRPVLLYVGRLAP 208 (364)
T ss_pred HHhc--------------------cC--CCceeecCCCccccccCccccc-------HHHHHHhCCCCCeEEEEEecccc
Confidence 2211 00 1256789999999877643211 1122222 46789999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+...++|+.++.++ |+++ |+.+|. +++...++ . . ...|.+. +.++.+++.
T Consensus 209 ~k~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~--------~---~-----~~~v~~~-g~~~~~~~~ 261 (364)
T cd03814 209 EKNLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE--------A---R-----YPNVHFL-GFLDGEELA 261 (364)
T ss_pred ccCHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh--------c---c-----CCcEEEE-eccCHHHHH
Confidence 99999999999999876 7665 777763 23222221 0 0 1236644 568999999
Q ss_pred HHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHH
Q 003999 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAV 502 (780)
Q Consensus 426 aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~ 502 (780)
.+|+.||++++||..||||++++|||||| .|+|+|..+|..+.+. .|++++|.|.+++
T Consensus 262 ~~~~~~d~~l~~s~~e~~~~~~lEa~a~g-------------------~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l 322 (364)
T cd03814 262 AAYASADVFVFPSRTETFGLVVLEAMASG-------------------LPVVAPDAGGPADIVTDGENGLLVEPGDAEAF 322 (364)
T ss_pred HHHHhCCEEEECcccccCCcHHHHHHHcC-------------------CCEEEcCCCCchhhhcCCcceEEcCCCCHHHH
Confidence 99999999999999999999999999997 4899999999888773 4899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHH
Q 003999 503 ADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDL 544 (780)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l 544 (780)
+++|.++++.++ ++....+..++++..+++..+++.+++-+
T Consensus 323 ~~~i~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 323 AAALAALLADPE-LRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHcCHH-HHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 999999998765 45566666788888899999988887643
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.5e-18 Score=183.68 Aligned_cols=277 Identities=21% Similarity=0.205 Sum_probs=192.1
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHH-HhhhcCCEEEeecHHHHHHHHHHHHhhh
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEIL-RGLLNCDLIGFHTFDYARHFLSCCSRML 277 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil-~~ll~~Dligf~t~~y~~~Fl~~~~r~l 277 (780)
-|+|++|......+......+..+.++.+..|.+++...... .....+. ..+..+|.+.+.+....+.+.+..
T Consensus 94 ~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~---- 167 (377)
T cd03798 94 PDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRK--RLLRALLRRALRRADAVIAVSEALADELKALG---- 167 (377)
T ss_pred CCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCch--hhHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc----
Confidence 389999965544333333333445789999998765432211 1223333 345578999999987766664310
Q ss_pred CceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHH
Q 003999 278 GLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAME 357 (780)
Q Consensus 278 ~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~ 357 (780)
....++.++|+|+|...+..... .....+ ....++.+++++|++++.||+..+++|++
T Consensus 168 ----------------~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~i~~~g~~~~~k~~~~li~~~~ 225 (377)
T cd03798 168 ----------------IDPEKVTVIPNGVDTERFSPADR-----AEARKL-GLPEDKKVILFVGRLVPRKGIDYLIEALA 225 (377)
T ss_pred ----------------CCCCceEEcCCCcCcccCCCcch-----HHHHhc-cCCCCceEEEEeccCccccCHHHHHHHHH
Confidence 11236788999999987764211 111111 11246789999999999999999999999
Q ss_pred HHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeec
Q 003999 358 QLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVN 437 (780)
Q Consensus 358 ~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt 437 (780)
.+.+++|+++ |+.+|. +++... +.++++..+ . .+.+.+.+.++.+++..+|+.||+++.|
T Consensus 226 ~~~~~~~~~~----l~i~g~-----~~~~~~----~~~~~~~~~----~---~~~v~~~g~~~~~~~~~~~~~ad~~i~~ 285 (377)
T cd03798 226 RLLKKRPDVH----LVIVGD-----GPLREA----LEALAAELG----L---EDRVTFLGAVPHEEVPAYYAAADVFVLP 285 (377)
T ss_pred HHHhcCCCeE----EEEEcC-----CcchHH----HHHHHHhcC----C---cceEEEeCCCCHHHHHHHHHhcCeeecc
Confidence 9988777655 776653 233222 233333222 1 1233456789999999999999999999
Q ss_pred cCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHHHHHHcCCH
Q 003999 438 AVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRD 514 (780)
Q Consensus 438 S~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~ 514 (780)
|..||+|++++|||+|| .|+|+|+.+|..+.+. +|++++|.|+++++++|.++++++.
T Consensus 286 ~~~~~~~~~~~Ea~~~G-------------------~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~ 346 (377)
T cd03798 286 SLREGFGLVLLEAMACG-------------------LPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLLADPW 346 (377)
T ss_pred hhhccCChHHHHHHhcC-------------------CCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHhcCcH
Confidence 99999999999999997 4899999888877773 3689999999999999999999876
Q ss_pred HHHHHHHHHH-hhHhhhCCHHHHHHHHHHHHH
Q 003999 515 SEKQLRHEKH-YRYVSTHDVAYWARSFAQDLE 545 (780)
Q Consensus 515 ~er~~r~~~~-~~~V~~~~~~~Wa~~~l~~l~ 545 (780)
. .+.++. ......+++..+++.+.+-++
T Consensus 347 ~---~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 347 L---RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred H---HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 4 333343 444566788888888776654
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.2e-19 Score=190.74 Aligned_cols=194 Identities=16% Similarity=0.211 Sum_probs=143.5
Q ss_pred eecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCC
Q 003999 302 LPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARG 381 (780)
Q Consensus 302 ~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~ 381 (780)
+|.|||.+.|.+... ...+.++++...+++..++++|+|+++.||+..+++|++++.+++|++..++.|+.+|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 567999998865321 11111222222235678899999999999999999999999999999876777776541
Q ss_pred ChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEec--CCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCc
Q 003999 382 SGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLID--RPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPI 459 (780)
Q Consensus 382 ~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~--~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~ 459 (780)
. ++.+ . +..+ .|+++. +.++.+++.++|+.||++|+||..||||++++||||||
T Consensus 192 --~-------~~~~----l----~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G----- 247 (335)
T PHA01633 192 --K-------QFTQ----L----EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMG----- 247 (335)
T ss_pred --H-------HHHH----c----CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcC-----
Confidence 1 1111 1 1111 366654 67788999999999999999999999999999999997
Q ss_pred cccccccCCCCCCCceEEEcCCCCccccCCC---------------------cEEECCCCHHHHHHHHHHHHcCCHHHHH
Q 003999 460 MDEALGRERDSPHTSMLVVSEFIGCSPSLSG---------------------AIRVNPWDIDAVADAMTLAINMRDSEKQ 518 (780)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---------------------al~VnP~d~~~~A~ai~~aL~m~~~er~ 518 (780)
.|+|+|..+|..+..++ |+.++++|++++|++|.+++.+++ +.
T Consensus 248 --------------~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~--~~ 311 (335)
T PHA01633 248 --------------TPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD--RE 311 (335)
T ss_pred --------------CCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC--hh
Confidence 48888887776664321 457888999999999999988864 33
Q ss_pred HHHHHHhhHhhhCCHHHHHHHHH
Q 003999 519 LRHEKHYRYVSTHDVAYWARSFA 541 (780)
Q Consensus 519 ~r~~~~~~~V~~~~~~~Wa~~~l 541 (780)
+|..+.++..+++|+..-+++++
T Consensus 312 ~~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 312 ERSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred hhhHHHHHHHHhcCHHHHHHHhh
Confidence 33456678888999888777765
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.8e-18 Score=190.40 Aligned_cols=264 Identities=15% Similarity=0.065 Sum_probs=181.2
Q ss_pred CCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCC-ChhHhhcCCC---hHHHHHhhhcCCEEEeecHHHHHHHHHHH
Q 003999 198 DDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFP-SSEIYRTLPV---RDEILRGLLNCDLIGFHTFDYARHFLSCC 273 (780)
Q Consensus 198 ~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP-~~e~~~~lp~---r~eil~~ll~~Dligf~t~~y~~~Fl~~~ 273 (780)
..|++.+|-.+.... .+.......+...++|...- ....-...++ .+.++..+-.+|.|.+.+..-.+.+...
T Consensus 99 ~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~~- 175 (372)
T cd04949 99 KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKVDGVIVATEQQKQDLQKQ- 175 (372)
T ss_pred CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhCCEEEEccHHHHHHHHHH-
Confidence 359999987776654 22333345567778885421 1100001112 2345555667899998888666666431
Q ss_pred HhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHH
Q 003999 274 SRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKL 353 (780)
Q Consensus 274 ~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l 353 (780)
++. ..++.++|+|++...+.... .....+..++++||+.+.||+..++
T Consensus 176 ---~~~----------------~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~~i~~vgrl~~~K~~~~li 223 (372)
T cd04949 176 ---FGN----------------YNPIYTIPVGSIDPLKLPAQ-------------FKQRKPHKIITVARLAPEKQLDQLI 223 (372)
T ss_pred ---hCC----------------CCceEEEcccccChhhcccc-------------hhhcCCCeEEEEEccCcccCHHHHH
Confidence 111 11277899999987765310 0113567899999999999999999
Q ss_pred HHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcce
Q 003999 354 LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAEC 433 (780)
Q Consensus 354 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 433 (780)
+|+.++.+++|+++ |+.+|.. ++...+ ..++.+. +..+ .|. +.| ..+++.++|+.||+
T Consensus 224 ~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~----~~~~~~~----~~~~--~v~-~~g--~~~~~~~~~~~ad~ 281 (372)
T cd04949 224 KAFAKVVKQVPDAT----LDIYGYG-----DEEEKL----KELIEEL----GLED--YVF-LKG--YTRDLDEVYQKAQL 281 (372)
T ss_pred HHHHHHHHhCCCcE----EEEEEeC-----chHHHH----HHHHHHc----CCcc--eEE-EcC--CCCCHHHHHhhhhE
Confidence 99999999999877 7777742 222223 3333332 2211 244 444 35679999999999
Q ss_pred eeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCC-CccccCC---CcEEECCCCHHHHHHHHHHH
Q 003999 434 CIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFI-GCSPSLS---GAIRVNPWDIDAVADAMTLA 509 (780)
Q Consensus 434 ~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~al~VnP~d~~~~A~ai~~a 509 (780)
+|+||..||||++.+|||+|| .|+|+|... |..+.+. .|++++|.|++++|++|..+
T Consensus 282 ~v~~S~~Eg~~~~~lEAma~G-------------------~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~la~~i~~l 342 (372)
T cd04949 282 SLLTSQSEGFGLSLMEALSHG-------------------LPVISYDVNYGPSEIIEDGENGYLVPKGDIEALAEAIIEL 342 (372)
T ss_pred EEecccccccChHHHHHHhCC-------------------CCEEEecCCCCcHHHcccCCCceEeCCCcHHHHHHHHHHH
Confidence 999999999999999999997 488999876 6666662 48999999999999999999
Q ss_pred HcCCHHHHHHHHHHHhhHhhhCCHHHHHH
Q 003999 510 INMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (780)
Q Consensus 510 L~m~~~er~~r~~~~~~~V~~~~~~~Wa~ 538 (780)
+++++ .+....+..++...++++..+++
T Consensus 343 l~~~~-~~~~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 343 LNDPK-LLQKFSEAAYENAERYSEENVWE 370 (372)
T ss_pred HcCHH-HHHHHHHHHHHHHHHhhHHHHHh
Confidence 99864 45555666777777777666654
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.3e-19 Score=181.84 Aligned_cols=177 Identities=24% Similarity=0.248 Sum_probs=132.2
Q ss_pred eEEeCCCCCCCCCCCCC-CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCceE
Q 003999 593 AIFLDYDGTVVPETSII-KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWE 671 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~-~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w~ 671 (780)
+|++|+||||++ .+ ..++++++++|++|+++ |+.|+|+|||+...+.+++..+ +.++|++||++++..++..|.
T Consensus 1 li~~D~DgTL~~---~~~~~~~~~~~~~l~~l~~~-g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLD---PNAHELSPETIEALERLREA-GVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcC---CCCCcCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEE
Confidence 689999999998 44 67999999999999996 7999999999999999999875 478999999999987655555
Q ss_pred ecCCCcChhH---HHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcC-CCeEEE-EcC
Q 003999 672 TNHLGADLEW---KKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLAN-EPAVVK-RGQ 746 (780)
Q Consensus 672 ~~~~~~d~~w---k~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~-~~v~v~-~g~ 746 (780)
. .......| .+.+..+++.+.+.+++..+|.+...+.++|+... .......++...++....+ .++.+. ++.
T Consensus 76 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 152 (204)
T TIGR01484 76 E-PSDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAE--LGQELDSKMRERLEKIGRNDLELEAIYVGK 152 (204)
T ss_pred c-ccccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccc--hhhHHHHHHHHHHHhhccccCcEEEEEecC
Confidence 3 11010111 12333445555667788888999999999998751 1111223444555544222 347777 799
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 747 HIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 747 ~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+++||.|+|++||.+++.++++++++..+|.
T Consensus 153 ~~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~ 183 (204)
T TIGR01484 153 TDLEVLPAGVDKGSALQALLKELNGKRDEIL 183 (204)
T ss_pred CEEEEecCCCChHHHHHHHHHHhCCCHHHEE
Confidence 9999999999999999999999999886553
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-17 Score=180.06 Aligned_cols=260 Identities=14% Similarity=0.089 Sum_probs=177.4
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhC
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLG 278 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~ 278 (780)
-|+|++|+.+...+...+... ..++.+..|..++...... .+....-..+-.+|.+.+.+......+.
T Consensus 84 ~d~i~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~~-------- 151 (348)
T cd03820 84 PDVVISFLTSLLTFLASLGLK--IVKLIVSEHNSPDAYKKRL--RRLLLRRLLYRRADAVVVLTEEDRALYY-------- 151 (348)
T ss_pred CCEEEEcCchHHHHHHHHhhc--cccEEEecCCCccchhhhh--HHHHHHHHHHhcCCEEEEeCHHHHHHhh--------
Confidence 399999998822222222221 1488888888765332111 0110122234468888887775441110
Q ss_pred ceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHH
Q 003999 279 LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQ 358 (780)
Q Consensus 279 ~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ 358 (780)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+++|+++
T Consensus 152 --------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l~~~~~~ 202 (348)
T cd03820 152 --------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLLIEAWAK 202 (348)
T ss_pred --------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHHHHHHHH
Confidence 0112357889999998765421 12457899999999999999999999999
Q ss_pred HHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeecc
Q 003999 359 LLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNA 438 (780)
Q Consensus 359 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 438 (780)
+.+.+|+++ |+.+|. +++... +.+++.+.+. .+.+.+.+. .+++..+|+.||++++||
T Consensus 203 l~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~~~-------~~~v~~~g~--~~~~~~~~~~ad~~i~ps 260 (348)
T cd03820 203 IAKKHPDWK----LRIVGD-----GPEREA----LEALIKELGL-------EDRVILLGF--TKNIEEYYAKASIFVLTS 260 (348)
T ss_pred HHhcCCCeE----EEEEeC-----CCCHHH----HHHHHHHcCC-------CCeEEEcCC--cchHHHHHHhCCEEEeCc
Confidence 988888765 776763 233222 3334443321 123334444 689999999999999999
Q ss_pred CCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C---CcEEECCCCHHHHHHHHHHHHcCCH
Q 003999 439 VRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S---GAIRVNPWDIDAVADAMTLAINMRD 514 (780)
Q Consensus 439 ~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~---~al~VnP~d~~~~A~ai~~aL~m~~ 514 (780)
..||||++++|||+|| .|+|+|...|..+.+ . .|+++++.|++++|++|.++++.++
T Consensus 261 ~~e~~~~~~~Ea~a~G-------------------~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~ 321 (348)
T cd03820 261 RFEGFPMVLLEAMAFG-------------------LPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEE 321 (348)
T ss_pred cccccCHHHHHHHHcC-------------------CCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHH
Confidence 9999999999999997 488999876554444 2 5899999999999999999998764
Q ss_pred HHHHHHHHHHhhHhhhCCHHHHHHHHH
Q 003999 515 SEKQLRHEKHYRYVSTHDVAYWARSFA 541 (780)
Q Consensus 515 ~er~~r~~~~~~~V~~~~~~~Wa~~~l 541 (780)
.++...+..++.++++++...+++|.
T Consensus 322 -~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 322 -LRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred -HHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 34444455677888899888888764
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.79 E-value=3e-17 Score=178.29 Aligned_cols=262 Identities=18% Similarity=0.183 Sum_probs=177.6
Q ss_pred HHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHH
Q 003999 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHF 269 (780)
Q Consensus 190 ~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~F 269 (780)
++++..++ |+|++|.+..+.++.+...+...+++++++|-.++.. +....+.. ..|.+-..+....+.|
T Consensus 90 ~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~------~~~~~~~~---~~d~ii~~s~~~~~~~ 158 (359)
T cd03823 90 RLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLIC------PRQGLFKK---GGDAVIAPSRFLLDRY 158 (359)
T ss_pred HHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeec------chhhhhcc---CCCEEEEeCHHHHHHH
Confidence 34444555 8999998855544433222334689999999765422 11111111 1288888777655555
Q ss_pred HHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCCh
Q 003999 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGI 349 (780)
Q Consensus 270 l~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi 349 (780)
.+ .+ ....++.++|+|+|...+..... ....++.+++++||+.+.||+
T Consensus 159 ~~-----~~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~~ 206 (359)
T cd03823 159 VA-----NG---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKGV 206 (359)
T ss_pred HH-----cC---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccCH
Confidence 42 11 01246889999999987753210 112467889999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHH
Q 003999 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (780)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 429 (780)
..+++|+..+.+ ++++ |+.+|... ......... +. -..|. +.+.++.+++..+|+
T Consensus 207 ~~li~~~~~l~~--~~~~----l~i~G~~~-----~~~~~~~~~-----------~~--~~~v~-~~g~~~~~~~~~~~~ 261 (359)
T cd03823 207 DLLLEAFKRLPR--GDIE----LVIVGNGL-----ELEEESYEL-----------EG--DPRVE-FLGAYPQEEIDDFYA 261 (359)
T ss_pred HHHHHHHHHHHh--cCcE----EEEEcCch-----hhhHHHHhh-----------cC--CCeEE-EeCCCCHHHHHHHHH
Confidence 999999999866 5554 87776422 211111111 10 01254 557889999999999
Q ss_pred hcceeeeccC-CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHH
Q 003999 430 VAECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (780)
Q Consensus 430 ~ADv~vvtS~-rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~a 505 (780)
.||++++||. .||++++++|||+|| .|+|+|+.+|..+.+. .|++++|.|+++++++
T Consensus 262 ~ad~~i~ps~~~e~~~~~~~Ea~a~G-------------------~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~ 322 (359)
T cd03823 262 EIDVLVVPSIWPENFPLVIREALAAG-------------------VPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAA 322 (359)
T ss_pred hCCEEEEcCcccCCCChHHHHHHHCC-------------------CCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHH
Confidence 9999999998 799999999999997 4899999988888773 4899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHH
Q 003999 506 MTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (780)
Q Consensus 506 i~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~ 542 (780)
|.++++.+. .++...+..++.++. ..+++.+++
T Consensus 323 i~~l~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~ 355 (359)
T cd03823 323 LERLIDDPD-LLERLRAGIEPPRSI---EDQAEEYLK 355 (359)
T ss_pred HHHHHhChH-HHHHHHHhHHHhhhH---HHHHHHHHH
Confidence 999999654 344444555555543 445554443
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.6e-18 Score=195.22 Aligned_cols=261 Identities=14% Similarity=0.106 Sum_probs=164.7
Q ss_pred CEEEEeCC-ccchH--HHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHH--HH
Q 003999 200 DCVWVHDY-HLMVL--PTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC--CS 274 (780)
Q Consensus 200 DiVwvhDy-hl~ll--p~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~--~~ 274 (780)
|+||+|.. ||-.. +..+.+++. +++..+|+.||. +++.-.. ..++.++ -.++++|+.. |+
T Consensus 436 DVVHLatP~~LGw~~~Glr~ArKl~--PVVasyHTny~e--Yl~~y~~--g~L~~~l---------lk~l~~~v~r~hcD 500 (794)
T PLN02501 436 DIAILEEPEHLNWYHHGKRWTDKFN--HVVGVVHTNYLE--YIKREKN--GALQAFF---------VKHINNWVTRAYCH 500 (794)
T ss_pred CEEEECCchhhccHHHHHHHHHHcC--CeEEEEeCCcHH--HHhHhcc--hhHHHHH---------HHHHHHHHHHhhCC
Confidence 99999984 45455 334555543 688899999984 4332111 1111110 1133334433 56
Q ss_pred hhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcC---CCeEEEEeccccccCChHH
Q 003999 275 RMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFD---GKKLILGIDDMDIFKGISL 351 (780)
Q Consensus 275 r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~---~~~vil~Vdrld~~KGi~~ 351 (780)
.++.++.... .+. + ..|.. .+|||++.|.+... . ... +++. ..+.+++||||.+.||+..
T Consensus 501 ~VIaPS~atq------~L~-~-~vI~n-VnGVDte~F~P~~r---~----~~~-r~lgi~~~~kgiLfVGRLa~EKGld~ 563 (794)
T PLN02501 501 KVLRLSAATQ------DLP-K-SVICN-VHGVNPKFLKIGEK---V----AEE-RELGQQAFSKGAYFLGKMVWAKGYRE 563 (794)
T ss_pred EEEcCCHHHH------Hhc-c-cceee-cccccccccCCcch---h----HHH-HhcCCccccCceEEEEcccccCCHHH
Confidence 6665542221 111 1 11221 15999998875321 1 111 2221 2355899999999999999
Q ss_pred HHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhc
Q 003999 352 KLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVA 431 (780)
Q Consensus 352 ~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~A 431 (780)
+|+|+..+.++.|+++ |+++| +|++.+++ ++++.+.+. .|.|++ .. ++..++|+.|
T Consensus 564 LLeAla~L~~~~pnvr----LvIVG-----DGP~reeL----e~la~eLgL--------~V~FLG-~~--dd~~~lyasa 619 (794)
T PLN02501 564 LIDLLAKHKNELDGFN----LDVFG-----NGEDAHEV----QRAAKRLDL--------NLNFLK-GR--DHADDSLHGY 619 (794)
T ss_pred HHHHHHHHHhhCCCeE----EEEEc-----CCccHHHH----HHHHHHcCC--------EEEecC-CC--CCHHHHHHhC
Confidence 9999999988888765 88776 45654444 444444321 255554 32 3455899999
Q ss_pred ceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECCCCHHHHHHHHHH
Q 003999 432 ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDIDAVADAMTL 508 (780)
Q Consensus 432 Dv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~~~A~ai~~ 508 (780)
||||+||.+||||+|++|||||| .|+|+|...|.. .+ + ++++ +.|.++++++|.+
T Consensus 620 DVFVlPS~sEgFGlVlLEAMA~G-------------------lPVVATd~pG~e-~V~~g~nGll--~~D~EafAeAI~~ 677 (794)
T PLN02501 620 KVFINPSISDVLCTATAEALAMG-------------------KFVVCADHPSNE-FFRSFPNCLT--YKTSEDFVAKVKE 677 (794)
T ss_pred CEEEECCCcccchHHHHHHHHcC-------------------CCEEEecCCCCc-eEeecCCeEe--cCCHHHHHHHHHH
Confidence 99999999999999999999997 488999887743 34 2 3443 3799999999999
Q ss_pred HHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHH
Q 003999 509 AINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDL 544 (780)
Q Consensus 509 aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l 544 (780)
+|++++. + ..++. ..+++|..-++++++..
T Consensus 678 LLsd~~~-r-l~~~a----~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 678 ALANEPQ-P-LTPEQ----RYNLSWEAATQRFMEYS 707 (794)
T ss_pred HHhCchh-h-hHHHH----HhhCCHHHHHHHHHHhh
Confidence 9998752 2 22222 33677777777776543
|
|
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.5e-18 Score=189.26 Aligned_cols=268 Identities=14% Similarity=0.080 Sum_probs=166.9
Q ss_pred HHHHcCCCCCEEEEeCCccc-hH--HHHHHHhcCCCcEEEEEeCCCCChhHhhcCC--ChHHHHHhhhcCCEEEeecHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLM-VL--PTFLRKRFNRIKLGFFLHSPFPSSEIYRTLP--VRDEILRGLLNCDLIGFHTFDY 265 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~-ll--p~~lr~~~~~~~i~~flH~PfP~~e~~~~lp--~r~eil~~ll~~Dligf~t~~y 265 (780)
+++..+| |+|++|+.-.+ .+ ...+++++ .. ++.++|+.|+ ++++.-. .....+...+ ..+
T Consensus 111 ~l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~--~Y~~~~~~g~~~~~l~~~~---------~~~ 175 (462)
T PLN02846 111 TIPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYL--EYVKREKNGRVKAFLLKYI---------NSW 175 (462)
T ss_pred HHHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChH--HHHHHhccchHHHHHHHHH---------HHH
Confidence 3444566 89999995444 43 44555554 34 7779999885 3332211 1112221111 122
Q ss_pred HHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc-C-C--CeEEEEec
Q 003999 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-D-G--KKLILGID 341 (780)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~-~--~~vil~Vd 341 (780)
++.| .|+.++..+... . ++.. .+...+.|||.+.|.+... . +++.+ + + .+++++||
T Consensus 176 ~~r~--~~d~vi~pS~~~-~-----~l~~---~~i~~v~GVd~~~f~~~~~-----~----~~~~~~~~~~~~~~~l~vG 235 (462)
T PLN02846 176 VVDI--YCHKVIRLSAAT-Q-----DYPR---SIICNVHGVNPKFLEIGKL-----K----LEQQKNGEQAFTKGAYYIG 235 (462)
T ss_pred HHHH--hcCEEEccCHHH-H-----HHhh---CEEecCceechhhcCCCcc-----c----HhhhcCCCCCcceEEEEEe
Confidence 2222 144444333211 0 0110 1222357999998864321 0 12222 2 2 35799999
Q ss_pred cccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCH
Q 003999 342 DMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPR 421 (780)
Q Consensus 342 rld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~ 421 (780)
||.+.||+..+|+||.++.+..|+++ |+++| +|++.++++ +++.+++. .++++.+..+.
T Consensus 236 RL~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~----~~a~~l~l--------~~~vf~G~~~~ 294 (462)
T PLN02846 236 KMVWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVK----AAAEKLEL--------DVRVYPGRDHA 294 (462)
T ss_pred cCcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHH----HHHHhcCC--------cEEEECCCCCH
Confidence 99999999999999999988888865 77775 567655554 44444321 13346665443
Q ss_pred HHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECCCC
Q 003999 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWD 498 (780)
Q Consensus 422 ~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d 498 (780)
+ ++|+.+||||+||.+||||+|.+|||||| .|+|++...| .+.+ + +++.+ .|
T Consensus 295 ~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~G-------------------~PVVa~~~~~-~~~v~~~~ng~~~--~~ 349 (462)
T PLN02846 295 D---PLFHDYKVFLNPSTTDVVCTTTAEALAMG-------------------KIVVCANHPS-NEFFKQFPNCRTY--DD 349 (462)
T ss_pred H---HHHHhCCEEEECCCcccchHHHHHHHHcC-------------------CcEEEecCCC-cceeecCCceEec--CC
Confidence 3 69999999999999999999999999997 4888888776 4556 2 36666 48
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHH
Q 003999 499 IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (780)
Q Consensus 499 ~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~ 545 (780)
.++++++|.++|+.++.+...+ ....++|..-+++|++.++
T Consensus 350 ~~~~a~ai~~~l~~~~~~~~~~------a~~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 350 GKGFVRATLKALAEEPAPLTDA------QRHELSWEAATERFLRVAD 390 (462)
T ss_pred HHHHHHHHHHHHccCchhHHHH------HHHhCCHHHHHHHHHHHhc
Confidence 9999999999998654322211 1237788888888776654
|
|
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-17 Score=184.61 Aligned_cols=240 Identities=13% Similarity=0.097 Sum_probs=165.3
Q ss_pred HHHHHcCCCCCEEEEeCCccchHHHHHHHhc-CCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHH
Q 003999 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRF-NRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARH 268 (780)
Q Consensus 190 ~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~-~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~ 268 (780)
++++..+| |+||+|+.....+..++++.. ...++..+.|..++....+. ...+..+|.+-..+..-.++
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 34455566 899999987766666666543 23455666776554322111 12235688888777655544
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEecccc--cc
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMD--IF 346 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld--~~ 346 (780)
+.. .++. ..++.++|+|||.+.+.... + +..++++++++||+. ..
T Consensus 148 ~~~-----~~~~---------------~~ki~vi~N~id~~~~~~~~--~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGIS---------------AQRISVIYNPVEIKTIIIPP--P-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCCC---------------HHHEEEEcCCCCHHHccCCC--c-----------ccCCCcEEEEEEEEecccC
Confidence 432 1211 22577889999976543211 1 013467899999996 46
Q ss_pred CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCC--CHHHH
Q 003999 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV--PRFEK 424 (780)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v--~~~el 424 (780)
||+..+++|+.++ .+ ++.|+.+|. |++.+ ++++++++.|.. ..|+|. |.+ +.+++
T Consensus 195 k~~~~l~~a~~~~---~~----~~~l~ivG~-----g~~~~----~l~~~~~~~~l~------~~v~f~-G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQT---TG----EWQLHIIGD-----GSDFE----KCKAYSRELGIE------QRIIWH-GWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhh---CC----CeEEEEEeC-----CccHH----HHHHHHHHcCCC------CeEEEe-cccCCcHHHH
Confidence 9999999999876 22 355888873 44433 344555444321 126544 444 55899
Q ss_pred HHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcC-CCCccccCC---CcEEECCCCHH
Q 003999 425 SAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE-FIGCSPSLS---GAIRVNPWDID 500 (780)
Q Consensus 425 ~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~---~al~VnP~d~~ 500 (780)
.++|+.||++|+||..||||++++|||||| .|+|+|+ .+|+.+.+. .|++|+|.|++
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-------------------~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSYG-------------------IPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHcC-------------------CCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 999999999999999999999999999997 4899999 888887773 48999999999
Q ss_pred HHHHHHHHHHcCCH
Q 003999 501 AVADAMTLAINMRD 514 (780)
Q Consensus 501 ~~A~ai~~aL~m~~ 514 (780)
++|++|.++++.++
T Consensus 313 ~la~~i~~l~~~~~ 326 (359)
T PRK09922 313 EFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999999875
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.3e-17 Score=176.88 Aligned_cols=277 Identities=17% Similarity=0.146 Sum_probs=191.0
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcC-CChHHHHH-hhhcCCEEEeecHHHHHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTL-PVRDEILR-GLLNCDLIGFHTFDYARHF 269 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~l-p~r~eil~-~ll~~Dligf~t~~y~~~F 269 (780)
.+..+| |+|++|..+..++..++++.....++.+..|...+........ .....+-+ .+-.+|.+.+.+....+.+
T Consensus 76 ~~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~ 153 (359)
T cd03808 76 LRKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDLA 153 (359)
T ss_pred HHhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHHH
Confidence 344555 8999998887777777776566778888888653321100000 00011111 2335799999888877776
Q ss_pred HHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCCh
Q 003999 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGI 349 (780)
Q Consensus 270 l~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi 349 (780)
.+. +.. .....+.+.|+|+|...+..... . ...++.+++++||+.+.||+
T Consensus 154 ~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~i~~~G~~~~~k~~ 203 (359)
T cd03808 154 LKL-----GII-------------KKKKTVLIPGSGVDLDRFSPSPE-----P-------IPEDDPVFLFVARLLKDKGI 203 (359)
T ss_pred HHh-----cCC-------------CcCceEEecCCCCChhhcCcccc-----c-------cCCCCcEEEEEeccccccCH
Confidence 541 100 01235677899999887754211 0 12467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHH
Q 003999 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (780)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 429 (780)
..+++|++.+.+++|+++ |+.+|.... .+ ..... ++...+. ...|.+++ . .+++..+|+
T Consensus 204 ~~li~~~~~l~~~~~~~~----l~i~G~~~~---~~--~~~~~---~~~~~~~------~~~v~~~g-~--~~~~~~~~~ 262 (359)
T cd03808 204 DELLEAARILKAKGPNVR----LLLVGDGDE---EN--PAAIL---EIEKLGL------EGRVEFLG-F--RDDVPELLA 262 (359)
T ss_pred HHHHHHHHHHHhcCCCeE----EEEEcCCCc---ch--hhHHH---HHHhcCC------cceEEEee-c--cccHHHHHH
Confidence 999999999988788765 877774321 11 11111 1222211 12366554 3 678999999
Q ss_pred hcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHH
Q 003999 430 VAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAM 506 (780)
Q Consensus 430 ~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai 506 (780)
.||++++||.+||||++++|||+|| .|+|+|..+|..+.+. .|+++++.|+++++++|
T Consensus 263 ~adi~i~ps~~e~~~~~~~Ea~~~G-------------------~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i 323 (359)
T cd03808 263 AADVFVLPSYREGLPRVLLEAMAMG-------------------RPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAI 323 (359)
T ss_pred hccEEEecCcccCcchHHHHHHHcC-------------------CCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHH
Confidence 9999999999999999999999997 4899999999988873 38999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHhhH-hhhCCHHHHHHHHH
Q 003999 507 TLAINMRDSEKQLRHEKHYRY-VSTHDVAYWARSFA 541 (780)
Q Consensus 507 ~~aL~m~~~er~~r~~~~~~~-V~~~~~~~Wa~~~l 541 (780)
.++++.++ .+....+..+++ ...+++..+++.++
T Consensus 324 ~~l~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 324 ERLIEDPE-LRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHhCHH-HHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 99887764 455555666777 57788888888765
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.77 E-value=6e-17 Score=183.27 Aligned_cols=272 Identities=10% Similarity=0.050 Sum_probs=173.0
Q ss_pred CCEEEEeCCccc--hHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChH---HH---HH-hh-hcCCEEEeecHHHHHH
Q 003999 199 DDCVWVHDYHLM--VLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRD---EI---LR-GL-LNCDLIGFHTFDYARH 268 (780)
Q Consensus 199 ~DiVwvhDyhl~--llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~---ei---l~-~l-l~~Dligf~t~~y~~~ 268 (780)
.|+|++|..... .+...+-.+..+.|+++.+|.-+++..-.. .+... .+ ++ .+ -.||.|...+....+.
T Consensus 96 ~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~-~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~ 174 (415)
T cd03816 96 ADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALK-LGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKED 174 (415)
T ss_pred CCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcc-cCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHH
Confidence 499999985432 222333233457899999997543211010 11000 11 11 12 2478777777654333
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHH---------------Hc--
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEK---------------QF-- 331 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~---------------~~-- 331 (780)
+.+ .+ ....+|.++|+| +...|.+... . .....+.+ ..
T Consensus 175 l~~-----~~---------------~~~~ki~vI~Ng-~~~~f~p~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (415)
T cd03816 175 LQQ-----FN---------------NWKIRATVLYDR-PPEQFRPLPL---E-EKHELFLKLAKTFLTRELRIGAVQLSE 229 (415)
T ss_pred HHh-----hh---------------ccCCCeeecCCC-CHHHceeCcH---H-HHHHHHHhccccccccccccccceecC
Confidence 321 11 123467889999 4566654311 1 11111111 01
Q ss_pred CCCeEEEEeccccccCChHHHHHHHHHHHHh------CCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccC
Q 003999 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQ------HPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYG 405 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~------~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g 405 (780)
++..++++++|+.+.||+..+++|++.+.+. +|+++ |+++|. |+..+ ++++++++.+
T Consensus 230 ~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~----l~ivG~-----G~~~~----~l~~~~~~~~---- 292 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLL----CIITGK-----GPLKE----KYLERIKELK---- 292 (415)
T ss_pred CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEE----EEEEec-----CccHH----HHHHHHHHcC----
Confidence 2356888999999999999999999998763 35544 887773 44433 4444544432
Q ss_pred CCCcccEEEecCCCCHHHHHHHHHhcceeeec---cCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCC
Q 003999 406 SPNYEPVVLIDRPVPRFEKSAYYAVAECCIVN---AVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFI 482 (780)
Q Consensus 406 ~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt---S~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~ 482 (780)
...++++.+.++.+++..+|+.||++|++ +..+||+++++|||||| .|+|+|...
T Consensus 293 ---l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G-------------------~PVI~s~~~ 350 (415)
T cd03816 293 ---LKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCG-------------------LPVCALDFK 350 (415)
T ss_pred ---CCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcC-------------------CCEEEeCCC
Confidence 23478788889999999999999999864 33588999999999997 489999998
Q ss_pred CccccCC---CcEEECCCCHHHHHHHHHHHHcCC--HHHHHHHHHHHhhHhhhCCHHHHHHHHH
Q 003999 483 GCSPSLS---GAIRVNPWDIDAVADAMTLAINMR--DSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (780)
Q Consensus 483 G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~~~~V~~~~~~~Wa~~~l 541 (780)
|+.+.+. +|++|+ |++++|++|.++++++ +++++.+.+..+++.+ .+|...+.
T Consensus 351 ~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~ 408 (415)
T cd03816 351 CIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWD 408 (415)
T ss_pred CHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHH
Confidence 8888773 488884 9999999999999982 4455555555666653 44555544
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.9e-16 Score=176.52 Aligned_cols=264 Identities=14% Similarity=0.101 Sum_probs=171.7
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhc------CCChH------H----HHH-hhhcCCEEEee
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRT------LPVRD------E----ILR-GLLNCDLIGFH 261 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~------lp~r~------e----il~-~ll~~Dligf~ 261 (780)
-|+|++|...+. .++..+..+++.++..|.-. ++.|.. .|.+. . +-+ .+-.+|.|.+.
T Consensus 105 ~D~v~~~~~~~~---~~~~~~~~~~p~i~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~~ 179 (397)
T TIGR03087 105 VDAIVVFSSAMA---QYVTPHVRGVPRIVDFVDVD--SDKWLQYARTKRWPLRWIYRREGRLLLAYERAIAARFDAATFV 179 (397)
T ss_pred CCEEEEeccccc---eeccccccCCCeEeehhhHH--HHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhhCCeEEEc
Confidence 499999854332 34433334667777777421 111111 11110 0 001 12357888887
Q ss_pred cHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc-CCCeEEEEe
Q 003999 262 TFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGI 340 (780)
Q Consensus 262 t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~~~~vil~V 340 (780)
+....+.+.+. . .....++.++|+|||.+.|.+....+ ..+ .++++|+++
T Consensus 180 S~~~~~~l~~~----~---------------~~~~~~v~vipngvd~~~f~~~~~~~----------~~~~~~~~~ilf~ 230 (397)
T TIGR03087 180 SRAEAELFRRL----A---------------PEAAGRITAFPNGVDADFFSPDRDYP----------NPYPPGKRVLVFT 230 (397)
T ss_pred CHHHHHHHHHh----C---------------CCCCCCeEEeecccchhhcCCCcccc----------CCCCCCCcEEEEE
Confidence 77665555321 0 11123578899999999886432100 112 356799999
Q ss_pred ccccccCChHHHH----HHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEec
Q 003999 341 DDMDIFKGISLKL----LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLID 416 (780)
Q Consensus 341 drld~~KGi~~~l----~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~ 416 (780)
||+++.||+..++ .++..+.+++|+++ |+++|. +++ .+++++. .. ..|++ .
T Consensus 231 G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l~ivG~-----g~~-----~~~~~l~----~~------~~V~~-~ 285 (397)
T TIGR03087 231 GAMDYWPNIDAVVWFAERVFPAVRARRPAAE----FYIVGA-----KPS-----PAVRALA----AL------PGVTV-T 285 (397)
T ss_pred EecCCccCHHHHHHHHHHHHHHHHHHCCCcE----EEEECC-----CCh-----HHHHHhc----cC------CCeEE-e
Confidence 9999999999887 56667777889877 887763 222 1233321 11 12654 4
Q ss_pred CCCCHHHHHHHHHhcceeeeccC-CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC--CCcEE
Q 003999 417 RPVPRFEKSAYYAVAECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL--SGAIR 493 (780)
Q Consensus 417 ~~v~~~el~aly~~ADv~vvtS~-rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--~~al~ 493 (780)
|.++ ++..+|+.||++|+||. .||++++.+|||||| .|+|+|..++..... +.+++
T Consensus 286 G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G-------------------~PVV~t~~~~~~i~~~~~~g~l 344 (397)
T TIGR03087 286 GSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMA-------------------KPVVASPEAAEGIDALPGAELL 344 (397)
T ss_pred eecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcC-------------------CCEEecCcccccccccCCcceE
Confidence 6676 68999999999999997 699999999999997 488888764322111 23788
Q ss_pred ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHH
Q 003999 494 VNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDL 544 (780)
Q Consensus 494 VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l 544 (780)
+. .|++++|++|.+++++++ .++...++.++++ ..+++...++++.+-+
T Consensus 345 v~-~~~~~la~ai~~ll~~~~-~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 345 VA-ADPADFAAAILALLANPA-EREELGQAARRRVLQHYHWPRNLARLDALL 394 (397)
T ss_pred eC-CCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 86 899999999999998654 4566667788887 4689998888876654
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.8e-17 Score=178.97 Aligned_cols=234 Identities=14% Similarity=0.075 Sum_probs=160.8
Q ss_pred CCcEEEEEeCCCCChhHhhcCCChHHHHHhh--hcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEE
Q 003999 222 RIKLGFFLHSPFPSSEIYRTLPVRDEILRGL--LNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 299 (780)
Q Consensus 222 ~~~i~~flH~PfP~~e~~~~lp~r~eil~~l--l~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i 299 (780)
..++++..|... +....++.-. -.+|.|...+......+.+ .+.. ...++
T Consensus 69 ~~~~v~e~~~~~---------~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~-----~g~~--------------~~~~i 120 (331)
T PHA01630 69 GKNIVFEVADTD---------AISHTALYFFRNQPVDEIVVPSQWSKNAFYT-----SGLK--------------IPQPI 120 (331)
T ss_pred CCceEEEEEeec---------hhhHHHHHHHhhccCCEEEECCHHHHHHHHH-----cCCC--------------CCCCE
Confidence 346666666522 1223333333 2488888888766555532 1110 01257
Q ss_pred EEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCC
Q 003999 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPA 379 (780)
Q Consensus 300 ~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 379 (780)
.++|+|||.+.|.+... ...++.++++++|+.+.||++.+++|++++.+++|+++ |+.+|.
T Consensus 121 ~vIpNGVd~~~f~~~~~-------------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~-- 181 (331)
T PHA01630 121 YVIPHNLNPRMFEYKPK-------------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSS-- 181 (331)
T ss_pred EEECCCCCHHHcCCCcc-------------ccCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeC--
Confidence 78999999988854210 01245566677889999999999999999988887765 777762
Q ss_pred CCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCc
Q 003999 380 RGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPI 459 (780)
Q Consensus 380 r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~ 459 (780)
+.. +. + +. +..+ +.+.++.+++..+|+.||+||+||..||||++++||||||
T Consensus 182 ---~~~--~~--~---l~-------~~~~------~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G----- 233 (331)
T PHA01630 182 ---NML--DP--R---LF-------GLNG------VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALG----- 233 (331)
T ss_pred ---ccc--ch--h---hc-------cccc------eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcC-----
Confidence 111 11 1 10 1111 1246789999999999999999999999999999999997
Q ss_pred cccccccCCCCCCCceEEEcCCCCccccC-C--CcEE--------------------ECCCCHHHHHHHHHHHHcCC-HH
Q 003999 460 MDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIR--------------------VNPWDIDAVADAMTLAINMR-DS 515 (780)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~--------------------VnP~d~~~~A~ai~~aL~m~-~~ 515 (780)
.|+|+|..+|.++.+ + +|++ ++| |.+++++++.++|..+ ++
T Consensus 234 --------------~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~~~ 298 (331)
T PHA01630 234 --------------LDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWTPE 298 (331)
T ss_pred --------------CCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCCHH
Confidence 489999988888776 3 2444 455 7889999999999875 23
Q ss_pred HHHHHHHH-HhhHhhhCCHHHHHHHHHHHHH
Q 003999 516 EKQLRHEK-HYRYVSTHDVAYWARSFAQDLE 545 (780)
Q Consensus 516 er~~r~~~-~~~~V~~~~~~~Wa~~~l~~l~ 545 (780)
+++.+++. ...+.+++++...++.+++-++
T Consensus 299 ~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 299 KKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 44444444 4456678999999999887765
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-16 Score=174.76 Aligned_cols=259 Identities=17% Similarity=0.153 Sum_probs=174.5
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHH-HhhhcCCEEEeecHHHHHHHHHHHHhhh
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEIL-RGLLNCDLIGFHTFDYARHFLSCCSRML 277 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil-~~ll~~Dligf~t~~y~~~Fl~~~~r~l 277 (780)
.|+|++|+...+.....+... .+.+..+++|........+. .....+. ..+..||.|.+.+..+.+.+.. +
T Consensus 84 ~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~s~~~~~~~~~-----~ 155 (357)
T cd03795 84 ADVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLL--KLYRPLQRRFLRRADAIVATSPNYAETSPV-----L 155 (357)
T ss_pred CCEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhh--hhhhHHHHHHHHhcCEEEeCcHHHHHHHHH-----h
Confidence 389999986654332222222 46788889996532211110 1111222 2455789998888776654432 1
Q ss_pred CceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHH
Q 003999 278 GLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAME 357 (780)
Q Consensus 278 ~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~ 357 (780)
+ ....++.++|+|+|...+..... . .......-.++.+|+++||+.+.||+..+++|++
T Consensus 156 ~---------------~~~~~~~~i~~gi~~~~~~~~~~-----~-~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~ 214 (357)
T cd03795 156 R---------------RFRDKVRVIPLGLDPARYPRPDA-----L-EEAIWRRAAGRPFFLFVGRLVYYKGLDVLLEAAA 214 (357)
T ss_pred c---------------CCccceEEecCCCChhhcCCcch-----h-hhHhhcCCCCCcEEEEecccccccCHHHHHHHHH
Confidence 1 01135788999999887754211 0 0111111246789999999999999999999999
Q ss_pred HHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeec
Q 003999 358 QLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVN 437 (780)
Q Consensus 358 ~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvt 437 (780)
++. ++.|+.+|. ++... ++.+++.+.+ .. ..|+ +.+.++.+++..+|+.||++++|
T Consensus 215 ~l~--------~~~l~i~G~-----g~~~~----~~~~~~~~~~----~~--~~V~-~~g~v~~~~~~~~~~~ad~~i~p 270 (357)
T cd03795 215 ALP--------DAPLVIVGE-----GPLEA----ELEALAAALG----LL--DRVR-FLGRLDDEEKAALLAACDVFVFP 270 (357)
T ss_pred hcc--------CcEEEEEeC-----ChhHH----HHHHHHHhcC----Cc--ceEE-EcCCCCHHHHHHHHHhCCEEEeC
Confidence 863 355877763 33322 3344443322 11 1365 45789999999999999999999
Q ss_pred cC--CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC----CcEEECCCCHHHHHHHHHHHHc
Q 003999 438 AV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS----GAIRVNPWDIDAVADAMTLAIN 511 (780)
Q Consensus 438 S~--rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~----~al~VnP~d~~~~A~ai~~aL~ 511 (780)
|. .||||++.+|||+|| .|+|+|+.+|..+.+. .|++++|.|+++++++|.++++
T Consensus 271 s~~~~e~~g~~~~Ea~~~g-------------------~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~ 331 (357)
T cd03795 271 SVERSEAFGIVLLEAMAFG-------------------KPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLE 331 (357)
T ss_pred CcccccccchHHHHHHHcC-------------------CCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHH
Confidence 96 599999999999997 4899999888877662 3899999999999999999999
Q ss_pred CCHHHHHHHHHHHhhHhhh
Q 003999 512 MRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 512 m~~~er~~r~~~~~~~V~~ 530 (780)
+++ +++...+..++++.+
T Consensus 332 ~~~-~~~~~~~~~~~~~~~ 349 (357)
T cd03795 332 DPE-LRERLGEAARERAEE 349 (357)
T ss_pred CHH-HHHHHHHHHHHHHHH
Confidence 764 555556667777654
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.3e-16 Score=171.31 Aligned_cols=245 Identities=13% Similarity=0.081 Sum_probs=164.3
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~ 271 (780)
.+..++ |+|++|+....++ + .+..+.++.+++|..++.... .........+.+-+-+...++.+.
T Consensus 83 ~~~~~~--Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~- 147 (335)
T cd03802 83 LAAGDF--DIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP- 147 (335)
T ss_pred HhcCCC--CEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc-
Confidence 334444 8999999887765 2 234578999999987643211 123334445554444433221110
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHH
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISL 351 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~ 351 (780)
.. .++.++|+|||++.|... ..++.+++++||+.+.||+..
T Consensus 148 -------------------~~----~~~~vi~ngvd~~~~~~~----------------~~~~~~i~~~Gr~~~~Kg~~~ 188 (335)
T cd03802 148 -------------------PL----PWVATVHNGIDLDDYPFR----------------GPKGDYLLFLGRISPEKGPHL 188 (335)
T ss_pred -------------------cc----cccEEecCCcChhhCCCC----------------CCCCCEEEEEEeeccccCHHH
Confidence 00 357889999999887531 134678999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhc
Q 003999 352 KLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVA 431 (780)
Q Consensus 352 ~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~A 431 (780)
+++|+++ ++++ |+++|... +...+...+.+... ++ ..|+ +.|.++.+++..+|+.|
T Consensus 189 li~~~~~-----~~~~----l~i~G~~~-----~~~~~~~~~~~~~~-~~--------~~v~-~~G~~~~~~~~~~~~~~ 244 (335)
T cd03802 189 AIRAARR-----AGIP----LKLAGPVS-----DPDYFYREIAPELL-DG--------PDIE-YLGEVGGAEKAELLGNA 244 (335)
T ss_pred HHHHHHh-----cCCe----EEEEeCCC-----CHHHHHHHHHHhcc-cC--------CcEE-EeCCCCHHHHHHHHHhC
Confidence 9998754 3444 77777422 21122222222110 11 1255 45789999999999999
Q ss_pred ceeeeccC-CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHHH
Q 003999 432 ECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMT 507 (780)
Q Consensus 432 Dv~vvtS~-rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~ 507 (780)
|++++||. .||||++++|||||| .|+|+|..+|..+.+. .|+++++ +++++++|.
T Consensus 245 d~~v~ps~~~E~~~~~~lEAma~G-------------------~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~ 303 (335)
T cd03802 245 RALLFPILWEEPFGLVMIEAMACG-------------------TPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVA 303 (335)
T ss_pred cEEEeCCcccCCcchHHHHHHhcC-------------------CCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHH
Confidence 99999997 599999999999997 4899999999888773 4899987 999999999
Q ss_pred HHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHH
Q 003999 508 LAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQ 542 (780)
Q Consensus 508 ~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~ 542 (780)
+++.++.. ..++.+ .++++..-++++++
T Consensus 304 ~l~~~~~~-------~~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 304 RADRLDRA-------ACRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred HHhccHHH-------HHHHHHHHhCCHHHHHHHHHH
Confidence 99775431 122222 55777766666654
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.74 E-value=3e-16 Score=172.85 Aligned_cols=246 Identities=16% Similarity=0.146 Sum_probs=164.1
Q ss_pred CCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCC----Chh-HhhcCCC-------------hHHHHHhhhcCCEEE
Q 003999 198 DDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFP----SSE-IYRTLPV-------------RDEILRGLLNCDLIG 259 (780)
Q Consensus 198 ~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~e-~~~~lp~-------------r~eil~~ll~~Dlig 259 (780)
+-|+|+++..... ...+ ..++.+..+++|.|.+ ..+ .....+. +....+.+..+|.|.
T Consensus 83 ~~D~v~~~~~~~~--~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii 158 (351)
T cd03804 83 GYDLVISSSHAVA--KGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFI 158 (351)
T ss_pred CCCEEEEcCcHHh--cccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 3589987653222 1122 3457788888898631 111 1111110 001112245688888
Q ss_pred eecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEE
Q 003999 260 FHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILG 339 (780)
Q Consensus 260 f~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~ 339 (780)
..+....+.+... .+ . ...++|+|+|.+.|.... ..++++++
T Consensus 159 ~~S~~~~~~~~~~----~~----------------~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~ 200 (351)
T cd03804 159 ANSRFVARRIKKY----YG----------------R--DATVIYPPVDTDRFTPAE----------------EKEDYYLS 200 (351)
T ss_pred ECCHHHHHHHHHH----hC----------------C--CcEEECCCCCHhhcCcCC----------------CCCCEEEE
Confidence 8887666555321 11 1 235678999988775321 23567999
Q ss_pred eccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCC
Q 003999 340 IDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419 (780)
Q Consensus 340 Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v 419 (780)
+||+.+.||+..+++|++++ | ++ |+.+|. |++.+++++ .. . ..|.+ .|.+
T Consensus 201 ~G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~~-------~~----~----~~V~~-~g~~ 250 (351)
T cd03804 201 VGRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLRA-------KA----G----PNVTF-LGRV 250 (351)
T ss_pred EEcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHHh-------hc----C----CCEEE-ecCC
Confidence 99999999999999999865 3 44 777773 343333322 11 1 23665 4689
Q ss_pred CHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--CcEEECC
Q 003999 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNP 496 (780)
Q Consensus 420 ~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~al~VnP 496 (780)
+.+++.++|+.||++++||. ||||++++|||||| .|+|+|..+|..+.+ + .|++++|
T Consensus 251 ~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G-------------------~Pvi~~~~~~~~e~i~~~~~G~~~~~ 310 (351)
T cd03804 251 SDEELRDLYARARAFLFPAE-EDFGIVPVEAMASG-------------------TPVIAYGKGGALETVIDGVTGILFEE 310 (351)
T ss_pred CHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcC-------------------CCEEEeCCCCCcceeeCCCCEEEeCC
Confidence 99999999999999999999 99999999999997 489999998888777 3 4899999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHH
Q 003999 497 WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539 (780)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~ 539 (780)
.|++++|++|.+++++++ +. .+.+++.+..+++.+..++
T Consensus 311 ~~~~~la~~i~~l~~~~~-~~---~~~~~~~~~~~~~~~~~~~ 349 (351)
T cd03804 311 QTVESLAAAVERFEKNED-FD---PQAIRAHAERFSESRFREK 349 (351)
T ss_pred CCHHHHHHHHHHHHhCcc-cC---HHHHHHHHHhcCHHHHHHH
Confidence 999999999999999874 11 2234444555665555443
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.73 E-value=3e-16 Score=168.69 Aligned_cols=248 Identities=18% Similarity=0.121 Sum_probs=167.2
Q ss_pred HcCCCCCEEEEeCC-ccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHH
Q 003999 194 VINPDDDCVWVHDY-HLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (780)
Q Consensus 194 ~~~~~~DiVwvhDy-hl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~ 272 (780)
..++ |+|++|++ ...++..+. .+. +.++.+..|..++..... ..+........+..+|.+.+.+....+.+.+.
T Consensus 79 ~~~~--dii~~~~~~~~~~~~~~~-~~~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 153 (353)
T cd03811 79 KEKP--DVVISHLTTTPNVLALLA-ARL-GTKLIVWEHNSLSLELKR-KLRLLLLIRKLYRRADKIVAVSEGVKEDLLKL 153 (353)
T ss_pred hcCC--CEEEEcCccchhHHHHHH-hhc-CCceEEEEcCcchhhhcc-chhHHHHHHhhccccceEEEeccchhhhHHHh
Confidence 3455 89999998 444444443 333 789999999887542211 11111122334557899888887766555432
Q ss_pred HHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHH
Q 003999 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (780)
Q Consensus 273 ~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~ 352 (780)
. + ....++.++|+|+|...+...... . .. .....++.+++++||+++.||+...
T Consensus 154 ~----~---------------~~~~~~~vi~~~~~~~~~~~~~~~-----~-~~-~~~~~~~~~i~~~g~~~~~k~~~~~ 207 (353)
T cd03811 154 L----G---------------IPPDKIEVIYNPIDIEEIRALAEE-----P-LE-LGIPPDGPVILAVGRLSPQKGFDTL 207 (353)
T ss_pred h----c---------------CCccccEEecCCcChhhcCcccch-----h-hh-cCCCCCceEEEEEecchhhcChHHH
Confidence 1 1 013467889999998877643210 0 00 0112567899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcc
Q 003999 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (780)
Q Consensus 353 l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~AD 432 (780)
++|++.+.++.++++ |+.+|. ++...+ +.+++.+.+.. ..|.+. +.+ +++..+|+.||
T Consensus 208 i~~~~~l~~~~~~~~----l~i~G~-----~~~~~~----~~~~~~~~~~~------~~v~~~-g~~--~~~~~~~~~~d 265 (353)
T cd03811 208 IRAFALLRKEGPDAR----LVILGD-----GPLREE----LEALAKELGLA------DRVHFL-GFQ--SNPYPYLKAAD 265 (353)
T ss_pred HHHHHHhhhcCCCce----EEEEcC-----CccHHH----HHHHHHhcCCC------ccEEEe-ccc--CCHHHHHHhCC
Confidence 999999988777765 777763 233223 33444443321 125544 443 46889999999
Q ss_pred eeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHH---HHH
Q 003999 433 CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVA---DAM 506 (780)
Q Consensus 433 v~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A---~ai 506 (780)
+++.||..||||++++|||+|| .|+|+|+.+|..+.+. .|++++|.|.++++ ++|
T Consensus 266 ~~i~ps~~e~~~~~~~Ea~~~G-------------------~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i 326 (353)
T cd03811 266 LFVLSSRYEGFPNVLLEAMALG-------------------TPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALAL 326 (353)
T ss_pred EEEeCcccCCCCcHHHHHHHhC-------------------CCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHH
Confidence 9999999999999999999997 4899999998888773 48999999999995 444
Q ss_pred HHHHcCC
Q 003999 507 TLAINMR 513 (780)
Q Consensus 507 ~~aL~m~ 513 (780)
...+..+
T Consensus 327 ~~~~~~~ 333 (353)
T cd03811 327 LDLLLDP 333 (353)
T ss_pred HhccCCh
Confidence 4454443
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.2e-16 Score=168.39 Aligned_cols=265 Identities=13% Similarity=0.017 Sum_probs=172.0
Q ss_pred CEEEEeCCccc--hHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHH-----HhhhcCCEEEeecHHHHHHHHHH
Q 003999 200 DCVWVHDYHLM--VLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEIL-----RGLLNCDLIGFHTFDYARHFLSC 272 (780)
Q Consensus 200 DiVwvhDyhl~--llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil-----~~ll~~Dligf~t~~y~~~Fl~~ 272 (780)
|+++||..... .+..++++ .+.++.+.+|..-.....+.. ....++ ..+..+|.|.+.+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~--~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRL--KGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHh--cCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH-
Confidence 55666654433 33333433 368899998853111111110 111122 1244688888877654444321
Q ss_pred HHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--CCCeEEEEeccccccCChH
Q 003999 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMDIFKGIS 350 (780)
Q Consensus 273 ~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~--~~~~vil~Vdrld~~KGi~ 350 (780)
. ++... .++|+|+|...+... .+.++++ .+++.++++||+.+.||+.
T Consensus 161 ---~---------------~~~~~---~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~~i~~~G~~~~~Kg~~ 209 (363)
T cd04955 161 ---K---------------YGRDS---TYIPYGADHVVSSEE----------DEILKKYGLEPGRYYLLVGRIVPENNID 209 (363)
T ss_pred ---h---------------cCCCC---eeeCCCcChhhcchh----------hhhHHhcCCCCCcEEEEEecccccCCHH
Confidence 1 11111 689999998765420 1122222 4556788999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHh
Q 003999 351 LKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAV 430 (780)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ 430 (780)
.+++|+.++.. + +.|+.+|... ...++.+++.+ + .+.. ..|+ +.|.++.+++..+|+.
T Consensus 210 ~li~a~~~l~~---~----~~l~ivG~~~-----~~~~~~~~~~~---~----~~~~--~~V~-~~g~~~~~~~~~~~~~ 267 (363)
T cd04955 210 DLIEAFSKSNS---G----KKLVIVGNAD-----HNTPYGKLLKE---K----AAAD--PRII-FVGPIYDQELLELLRY 267 (363)
T ss_pred HHHHHHHhhcc---C----ceEEEEcCCC-----CcchHHHHHHH---H----hCCC--CcEE-EccccChHHHHHHHHh
Confidence 99999987632 3 4488787432 11123333322 1 1211 1355 4578999999999999
Q ss_pred cceeeeccCC-cCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-CCcEEECCCCHHHHHHHHHH
Q 003999 431 AECCIVNAVR-DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTL 508 (780)
Q Consensus 431 ADv~vvtS~r-EGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~ 508 (780)
||++++||.. ||||++++|||+|| .|+|+|..+|..+.+ .++..++|.|. +|++|.+
T Consensus 268 ad~~v~ps~~~e~~~~~~~EAma~G-------------------~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~ 326 (363)
T cd04955 268 AALFYLHGHSVGGTNPSLLEAMAYG-------------------CPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEE 326 (363)
T ss_pred CCEEEeCCccCCCCChHHHHHHHcC-------------------CCEEEecCCccceeecCCeeEecCchH--HHHHHHH
Confidence 9999999999 99999999999997 489999988887777 46888888776 9999999
Q ss_pred HHcCCHHHHHHHHHHHhhHhhh-CCHHHHHHHHHHHH
Q 003999 509 AINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQDL 544 (780)
Q Consensus 509 aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~~~l~~l 544 (780)
++++++ .+....++.++++.+ +++..-++++++-+
T Consensus 327 l~~~~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 327 LEADPE-EVSAMAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred HHhCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 999874 344445556776654 88888787777543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.1e-16 Score=168.76 Aligned_cols=194 Identities=16% Similarity=0.188 Sum_probs=142.1
Q ss_pred EEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEecccc--ccCChHHHHHHHHHHHHh-CCCCCCce
Q 003999 297 VYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMD--IFKGISLKLLAMEQLLQQ-HPGMRGKV 370 (780)
Q Consensus 297 ~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld--~~KGi~~~l~A~~~ll~~-~P~~~~~v 370 (780)
.++.++|+|||.+.+.+.. . ...++.+ +++.+++.+++.. +.||+..+++|++.+.++ .|+ +
T Consensus 159 ~~~~vi~ngi~~~~~~~~~-----~---~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPRD-----K---REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----I 226 (365)
T ss_pred CceEEeCCCCcccccCCCc-----H---HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----e
Confidence 3678999999998875421 1 2233444 3556666666654 499999999999988665 344 4
Q ss_pred EEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCC-HHHHHHHHHhcceeeeccCCcCCCcchhh
Q 003999 371 VLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP-RFEKSAYYAVAECCIVNAVRDGMNLVPYK 449 (780)
Q Consensus 371 vLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~-~~el~aly~~ADv~vvtS~rEGmnLv~~E 449 (780)
.++.+|... ...+ . ..+ ..|. +.+.++ .+++..+|+.||++++||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~~~------~---~~~--------~~v~-~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEIP------P---DLP--------FPVH-YLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhhh------c---cCC--------CceE-ecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 477776321 1000 0 111 1255 445777 88999999999999999999999999999
Q ss_pred hhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Q 003999 450 YIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYR 526 (780)
Q Consensus 450 a~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~ 526 (780)
||+|| .|+|+|..+|..+.+. .|+++++.|++++|++|.++++.++ ++....++.++
T Consensus 284 am~~g-------------------~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~~~-~~~~~~~~~~~ 343 (365)
T cd03825 284 ALACG-------------------TPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLADPD-EREELGEAARE 343 (365)
T ss_pred HHhcC-------------------CCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhCHH-HHHHHHHHHHH
Confidence 99997 4889999888888773 4899999999999999999998654 45555566677
Q ss_pred Hhh-hCCHHHHHHHHHHHHH
Q 003999 527 YVS-THDVAYWARSFAQDLE 545 (780)
Q Consensus 527 ~V~-~~~~~~Wa~~~l~~l~ 545 (780)
++. .+++...++.+++-++
T Consensus 344 ~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 344 LAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHhcCHHHHHHHHHHHHh
Confidence 774 5898888888886654
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.6e-16 Score=167.14 Aligned_cols=177 Identities=15% Similarity=0.148 Sum_probs=115.4
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCc-eEEecCccEEeeCCCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML-GIAAEHGYFIRWNKTS 668 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~l-gliaenG~~ir~~~~~ 668 (780)
..|+|++|+||||++ .++.++++++++|+++++. |+.|+|+|||++..+.+.+..+... .+|++||++|.+.++.
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~~~~-g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 77 (264)
T COG0561 2 MIKLLAFDLDGTLLD---SNKTISPETKEALARLREK-GVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGEL 77 (264)
T ss_pred CeeEEEEcCCCCccC---CCCccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcE
Confidence 468999999999999 6777999999999999994 9999999999999999999887432 6999999999998432
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhc--CCCceeecccceEE------------E-ee----ccCC--CC---cccc--
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEA--TDGSNIEIKESALV------------W-HH----QDAD--PD---FGSC-- 722 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~--t~gs~iE~k~~~l~------------~-hy----r~ad--~d---~~~~-- 722 (780)
.... ..+ ++.+..+++...+. ....+......... . ++ ...+ .+ +...
T Consensus 78 i~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T COG0561 78 LFQK---PLS---REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKD 151 (264)
T ss_pred Eeee---cCC---HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecC
Confidence 2322 233 45566666655332 11122221100000 0 00 0000 00 0001
Q ss_pred --cHHHHHHHHHHHhcCCCeEEEEcCe-EEEEEeCCCCHHHHHHHHHHHcCCCCCcc
Q 003999 723 --QAKELLDHLESVLANEPAVVKRGQH-IVEVKPQVLRPSSISVSLSLSVCVRARAC 776 (780)
Q Consensus 723 --qa~el~~~L~~~l~~~~v~v~~g~~-~vEI~p~gvsKG~al~~Ll~~l~i~~~~~ 776 (780)
...++...+.+.+....+.+.++.. ++||.|+|+|||.|+++|++++|+++++|
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v 208 (264)
T COG0561 152 HEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEV 208 (264)
T ss_pred hHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHe
Confidence 1122333333333333455666554 49999999999999999999999997643
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-15 Score=170.64 Aligned_cols=287 Identities=18% Similarity=0.182 Sum_probs=178.8
Q ss_pred HHHHHHHcCCCCCEEEEeCCccchHHHHHHH-hcCCCcEEEEEeCCCCC-hhHhhcCCChHHHHHhhh-cCCEEEeecHH
Q 003999 188 ADKVMEVINPDDDCVWVHDYHLMVLPTFLRK-RFNRIKLGFFLHSPFPS-SEIYRTLPVRDEILRGLL-NCDLIGFHTFD 264 (780)
Q Consensus 188 A~~v~~~~~~~~DiVwvhDyhl~llp~~lr~-~~~~~~i~~flH~PfP~-~e~~~~lp~r~eil~~ll-~~Dligf~t~~ 264 (780)
..++++..+| |+|++|.+.++ |.++.. +..++++.+..|.-.+. ...++.+ ..+.+.++ .+|.|..++..
T Consensus 116 ~~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~~ 188 (425)
T PRK05749 116 VRRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSEE 188 (425)
T ss_pred HHHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCHH
Confidence 4455677788 89999988765 444433 23467777665543322 2222211 23344444 48999999998
Q ss_pred HHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc-CCCeEEEEeccc
Q 003999 265 YARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDM 343 (780)
Q Consensus 265 y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~~~~vil~Vdrl 343 (780)
..+.|.+ +|.. .. +.++|++ +.+.+.. +........+++++ +++++++++++.
T Consensus 189 ~~~~l~~-----~g~~---------------~~-i~vi~n~-~~d~~~~----~~~~~~~~~~r~~~~~~~~vil~~~~~ 242 (425)
T PRK05749 189 DAERFLA-----LGAK---------------NE-VTVTGNL-KFDIEVP----PELAARAATLRRQLAPNRPVWIAASTH 242 (425)
T ss_pred HHHHHHH-----cCCC---------------CC-cEecccc-cccCCCC----hhhHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 8877753 2321 12 4455552 3222211 11112345567777 678899999875
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhcc---CC---C-CcccEEEec
Q 003999 344 DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVY---GS---P-NYEPVVLID 416 (780)
Q Consensus 344 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~---g~---~-~~~pV~~~~ 416 (780)
.|+...+++||.++++++|+++ |+++| ++++. ..++++++++.+-.+ .. . .-..|. +.
T Consensus 243 --~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r---~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~-l~ 307 (425)
T PRK05749 243 --EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPER---FKEVEELLKKAGLSYVRRSQGEPPSADTDVL-LG 307 (425)
T ss_pred --chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhh---HHHHHHHHHhCCCcEEEccCCCCCCCCCcEE-EE
Confidence 5889999999999998899876 77664 34442 123444444332211 00 0 001233 32
Q ss_pred CCCCHHHHHHHHHhcceeee-ccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc----ccC-CC
Q 003999 417 RPVPRFEKSAYYAVAECCIV-NAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS----PSL-SG 490 (780)
Q Consensus 417 ~~v~~~el~aly~~ADv~vv-tS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l-~~ 490 (780)
+ +..|+.++|+.||++++ +|..||+|++++|||||| .|+|.+...|.. +.+ .+
T Consensus 308 ~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G-------------------~PVI~g~~~~~~~e~~~~~~~~ 366 (425)
T PRK05749 308 D--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFG-------------------VPVISGPHTFNFKEIFERLLQA 366 (425)
T ss_pred e--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhC-------------------CCEEECCCccCHHHHHHHHHHC
Confidence 2 35799999999999666 788899999999999997 478877654432 222 35
Q ss_pred cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHH
Q 003999 491 AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (780)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~ 546 (780)
|.++.|.|++++|++|.+++++++ .+..+.++.++++.++. .=+++.++.+.+
T Consensus 367 g~~~~~~d~~~La~~l~~ll~~~~-~~~~m~~~a~~~~~~~~--~~~~~~~~~l~~ 419 (425)
T PRK05749 367 GAAIQVEDAEDLAKAVTYLLTDPD-ARQAYGEAGVAFLKQNQ--GALQRTLQLLEP 419 (425)
T ss_pred CCeEEECCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHhCc--cHHHHHHHHHHH
Confidence 777889999999999999998654 46666677888887762 333445544443
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.69 E-value=3e-15 Score=166.90 Aligned_cols=236 Identities=10% Similarity=-0.026 Sum_probs=154.7
Q ss_pred CEEEEeCCccch--HHHHHHHhcCCCcEEEEEeCCCCChhHhhc-C---CC----hHHHHHhh-hcCCEEEeecHHHHHH
Q 003999 200 DCVWVHDYHLMV--LPTFLRKRFNRIKLGFFLHSPFPSSEIYRT-L---PV----RDEILRGL-LNCDLIGFHTFDYARH 268 (780)
Q Consensus 200 DiVwvhDyhl~l--lp~~lr~~~~~~~i~~flH~PfP~~e~~~~-l---p~----r~eil~~l-l~~Dligf~t~~y~~~ 268 (780)
|+|++|..+.+. ++..+-.+..++|+.+++|..+.+ .+.. . +. ...+-+.+ -.+|.|...+....+.
T Consensus 102 DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~~~~~~ 179 (371)
T PLN02275 102 DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTKAMQHE 179 (371)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCHHHHHH
Confidence 899999877532 233333334568899999975421 1100 0 10 11111222 2478888877765554
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCC
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKG 348 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KG 348 (780)
..+. .| .. +.++|+|+ .+.|.+... . ..++ -+.+.++++++|+.+.||
T Consensus 180 l~~~----~g----------------~~--i~vi~n~~-~~~f~~~~~--~-----~~~~--~~~~~~i~~~grl~~~k~ 227 (371)
T PLN02275 180 LDQN----WG----------------IR--ATVLYDQP-PEFFRPASL--E-----IRLR--PNRPALVVSSTSWTPDED 227 (371)
T ss_pred HHHh----cC----------------CC--eEEECCCC-HHHcCcCCc--h-----hccc--CCCcEEEEEeCceeccCC
Confidence 4320 11 11 57788884 466654211 0 1111 134567889999999999
Q ss_pred hHHHHHHHHHHHH-----------------hCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 349 ISLKLLAMEQLLQ-----------------QHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 349 i~~~l~A~~~ll~-----------------~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
+..+++|+..+.. .+|++ .|+.+| +|++.++++ +.+++. |. ..
T Consensus 228 ~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i----~l~ivG-----~G~~~~~l~----~~~~~~----~l---~~ 287 (371)
T PLN02275 228 FGILLEAAVMYDRRVAARLNESDSASGKQSLYPRL----LFIITG-----KGPQKAMYE----EKISRL----NL---RH 287 (371)
T ss_pred HHHHHHHHHHHHhhhhhccccccccccccccCCCe----EEEEEe-----CCCCHHHHH----HHHHHc----CC---Cc
Confidence 9999999988742 34554 488887 455544444 444433 22 24
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeecc---CCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNA---VRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL 488 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS---~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (780)
|+++.+.++.+++..+|+.||+||+|+ ..|||+++.+|||||| .|+|+|..+|..+.+
T Consensus 288 v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G-------------------~PVVa~~~gg~~eiv 348 (371)
T PLN02275 288 VAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCG-------------------LPVCAVSYSCIGELV 348 (371)
T ss_pred eEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCC-------------------CCEEEecCCChHHHc
Confidence 777777789999999999999999853 3489999999999997 489999988888877
Q ss_pred -C--CcEEECCCCHHHHHHHHHHHH
Q 003999 489 -S--GAIRVNPWDIDAVADAMTLAI 510 (780)
Q Consensus 489 -~--~al~VnP~d~~~~A~ai~~aL 510 (780)
+ .|++|+ |++++|++|.++|
T Consensus 349 ~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 349 KDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred cCCCCeEEEC--CHHHHHHHHHHhC
Confidence 3 388886 6999999998865
|
|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.8e-15 Score=166.96 Aligned_cols=295 Identities=20% Similarity=0.214 Sum_probs=198.4
Q ss_pred CCEEEEeCCccchHHHHHHHh---cCCCcEEEEEeCC-----CCChhHh--hcCCC---h----------HHHHHhhhcC
Q 003999 199 DDCVWVHDYHLMVLPTFLRKR---FNRIKLGFFLHSP-----FPSSEIY--RTLPV---R----------DEILRGLLNC 255 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~---~~~~~i~~flH~P-----fP~~e~~--~~lp~---r----------~eil~~ll~~ 255 (780)
.|||++||||+.|+|.++++. ...++.+|+.|.- |+ ..++ -.||. . .-+--|+..|
T Consensus 131 pDIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~-~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~a 209 (487)
T COG0297 131 PDIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFR-LQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYA 209 (487)
T ss_pred CCEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccc-hhhHHHhcCCHHHhhhceeeecCcchhhhhhheec
Confidence 399999999999999999997 7789999999954 33 2222 23441 0 1222346678
Q ss_pred CEEEeecHHHHHHHHHHHHhhhCceeccCCceeE-EEEcCeEEEEEEeecCCCchhhhhhcC-----------CchhHHH
Q 003999 256 DLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIG-LDYFGRTVYIKILPVGVHMGRLESVLN-----------LPATATK 323 (780)
Q Consensus 256 Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~-~~~~gr~~~i~i~P~GId~~~~~~~~~-----------~~~~~~~ 323 (780)
|.|.--++.|+..-.. ...| .|..+ +.+ +.-++.-+-+|||.....+... .+.-.+.
T Consensus 210 d~vttVSptYa~Ei~t---~~~g------~gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~n 278 (487)
T COG0297 210 DAVTTVSPTYAGEIYT---PEYG------EGLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAEN 278 (487)
T ss_pred cEEEEECHHHHHhhcc---cccc------ccchhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHH
Confidence 9998888888866541 0010 00000 111 1123444556777665533211 0111222
Q ss_pred HHHHHHHc--C---CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHH
Q 003999 324 IKEIEKQF--D---GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAK 398 (780)
Q Consensus 324 ~~~lr~~~--~---~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~ 398 (780)
...|++++ + +.+++..|+|++..||++.+++|+..++++. ++ ||.+|.+ -..++..+..+++
T Consensus 279 k~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g-------d~~le~~~~~la~ 345 (487)
T COG0297 279 KVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG-------DPELEEALRALAS 345 (487)
T ss_pred HHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC-------cHHHHHHHHHHHH
Confidence 34466666 2 5689999999999999999999999999987 55 7777742 1356778888888
Q ss_pred HHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEE
Q 003999 399 RINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVV 478 (780)
Q Consensus 399 ~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~ 478 (780)
++..+.. +.--.+..-...+|+.||++++||..||+||+-+++|.-| +++|+
T Consensus 346 ~~~~~~~---------~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amryG-------------------tvpIv 397 (487)
T COG0297 346 RHPGRVL---------VVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRYG-------------------TLPIV 397 (487)
T ss_pred hcCceEE---------EEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHcC-------------------CcceE
Confidence 8765432 1112345566789999999999999999999999999975 58899
Q ss_pred cCCCCccccCC----------C-cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh--hhCCHHHHHHHHHHHHH
Q 003999 479 SEFIGCSPSLS----------G-AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV--STHDVAYWARSFAQDLE 545 (780)
Q Consensus 479 Se~~G~~~~l~----------~-al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V--~~~~~~~Wa~~~l~~l~ 545 (780)
.+.+|.++.+. + |+++.|.|.++++.||.+|+..-..+... ++...... ..+++..=|.++.+-.+
T Consensus 398 ~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~-w~~~~~~~m~~d~sw~~sa~~y~~lY~ 476 (487)
T COG0297 398 RETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLL-WRKVQPNAMGADFSWDLSAKEYVELYK 476 (487)
T ss_pred cccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHH-HHHHHHhhcccccCchhHHHHHHHHHH
Confidence 99999988772 2 78898889999999999999765322220 12222222 45666777777776555
Q ss_pred HH
Q 003999 546 RA 547 (780)
Q Consensus 546 ~~ 547 (780)
..
T Consensus 477 ~~ 478 (487)
T COG0297 477 PL 478 (487)
T ss_pred HH
Confidence 43
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-15 Score=162.95 Aligned_cols=177 Identities=18% Similarity=0.126 Sum_probs=111.9
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~ 669 (780)
.|+|++|+||||++ .++.++++++++|++|++ .|+.|+|+|||++..+.+.+..+. ..++|+.||+.|+...+..
T Consensus 2 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~ 77 (272)
T PRK15126 2 ARLAAFDMDGTLLM---PDHHLGEKTLSTLARLRE-RDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGEL 77 (272)
T ss_pred ccEEEEeCCCcCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCE
Confidence 47999999999998 667899999999999999 499999999999999999887763 3468999999998643332
Q ss_pred eEecCCCcChhHHHHHHHHHHHHHhcC--------CCceeecccce-------EEEeeccCC------CCcc-------c
Q 003999 670 WETNHLGADLEWKKIVEPVMRSYTEAT--------DGSNIEIKESA-------LVWHHQDAD------PDFG-------S 721 (780)
Q Consensus 670 w~~~~~~~d~~wk~~v~~i~~~~~e~t--------~gs~iE~k~~~-------l~~hyr~ad------~d~~-------~ 721 (780)
+.. ..++ .+.+.++++...+.. .+.+....... ..+.+...+ ..+. .
T Consensus 78 l~~--~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~ 152 (272)
T PRK15126 78 LHR--QDLP---ADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDH 152 (272)
T ss_pred EEe--ecCC---HHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCH
Confidence 221 2233 344555554432210 11111100000 000010000 0000 0
Q ss_pred ccHHHHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 722 CQAKELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 722 ~qa~el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
....++...+.+.+.. .+.+ .++..++||.|+|+|||.|+++|++++||++++|.
T Consensus 153 ~~~~~~~~~l~~~~~~-~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~ 208 (272)
T PRK15126 153 DDLTRLQIQLNEALGE-RAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCM 208 (272)
T ss_pred HHHHHHHHHHHHHhcC-CEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeE
Confidence 0112233333333322 2454 45678999999999999999999999999986653
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.66 E-value=7.1e-16 Score=162.45 Aligned_cols=176 Identities=15% Similarity=0.178 Sum_probs=118.0
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC---CceEEecCccEEeeCCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE---MLGIAAEHGYFIRWNKT 667 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~---~lgliaenG~~ir~~~~ 667 (780)
+.+|++|+||||+++...+...++++.++++++.+ .|+.|+++|||+...+.+....++ .-.+|++||+.|+.++.
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~-~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~ 79 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRG-EDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGA 79 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhc-cCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCC
Confidence 35899999999998544456678999999999998 499999999999999998865432 12489999999987541
Q ss_pred ----CceEecCCCcChhHH-HHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCC--Ce
Q 003999 668 ----SEWETNHLGADLEWK-KIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANE--PA 740 (780)
Q Consensus 668 ----~~w~~~~~~~d~~wk-~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~--~v 740 (780)
..|... ....|. +.+..+...+...++....+.+...+.+..... ++.++...+.+.+... .+
T Consensus 80 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~l~~~l~~~~~~~ 149 (249)
T TIGR01485 80 EVPDQHWAEY---LSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPE-------AAPEVIKQLTEMLKETGLDV 149 (249)
T ss_pred CcCCHHHHHH---HhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechh-------hhhHHHHHHHHHHHhcCCCE
Confidence 112111 112233 223333333333344443344445555543321 1233445555555443 34
Q ss_pred E-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 741 V-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 741 ~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
. +.++..++||.|+++|||.|+++|++.+++++++|.
T Consensus 150 ~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i 187 (249)
T TIGR01485 150 KLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTL 187 (249)
T ss_pred EEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEE
Confidence 4 467889999999999999999999999999987664
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-15 Score=162.19 Aligned_cols=177 Identities=12% Similarity=0.129 Sum_probs=111.4
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~ 669 (780)
.|+|++|+||||++ .++.++++++++|++|++ .|+.|+|+|||++..+.+.+..++ ..++||.||+.++..++..
T Consensus 2 ikli~~DlDGTLl~---~~~~is~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 77 (266)
T PRK10976 2 YQVVASDLDGTLLS---PDHTLSPYAKETLKLLTA-RGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNL 77 (266)
T ss_pred ceEEEEeCCCCCcC---CCCcCCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCE
Confidence 47999999999998 567899999999999999 599999999999999999888764 3468999999998643322
Q ss_pred eEecCCCcChhHHHHHHHHHHHHHhc---------CCCceeecccce---------EEEeec---cCCC-Cccc----c-
Q 003999 670 WETNHLGADLEWKKIVEPVMRSYTEA---------TDGSNIEIKESA---------LVWHHQ---DADP-DFGS----C- 722 (780)
Q Consensus 670 w~~~~~~~d~~wk~~v~~i~~~~~e~---------t~gs~iE~k~~~---------l~~hyr---~ad~-d~~~----~- 722 (780)
.. ....+ ++.+.++++...+. ..+.++...... ..+... ...+ ++.. .
T Consensus 78 i~--~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~ 152 (266)
T PRK10976 78 IF--SHNLD---RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCD 152 (266)
T ss_pred eh--hhcCC---HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcC
Confidence 21 12233 34455555544321 111111110000 000000 0000 0000 0
Q ss_pred cHH---HHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 723 QAK---ELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 723 qa~---el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
..+ ++.+.+.+.+. ..+.+ .++..++||.|+|+|||.|+++|++++||++++|.
T Consensus 153 ~~~~~~~~~~~l~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~vi 210 (266)
T PRK10976 153 SHEKLLPLEQAINARWG-DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCI 210 (266)
T ss_pred CHHHHHHHHHHHHHHhC-CcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeE
Confidence 111 22223332222 23554 46778999999999999999999999999987653
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.9e-15 Score=157.74 Aligned_cols=175 Identities=13% Similarity=0.139 Sum_probs=109.9
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC----CceEEecCccEEeeCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE----MLGIAAEHGYFIRWNK 666 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~----~lgliaenG~~ir~~~ 666 (780)
.|+|++|+||||++ .++.++++++++|++|++ .|+.|+|+|||++..+.+.+..+. ..++|+.||+.|+...
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~ 78 (270)
T PRK10513 3 IKLIAIDMDGTLLL---PDHTISPAVKQAIAAARA-KGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAA 78 (270)
T ss_pred eEEEEEecCCcCcC---CCCccCHHHHHHHHHHHH-CCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECC
Confidence 58999999999998 567899999999999999 499999999999999998887763 1358999999998632
Q ss_pred -CC-ceEecCCCcChhHHHHHHHHHHHHHhc--------CCCceeecccce-----------EEEeeccC---CCC--cc
Q 003999 667 -TS-EWETNHLGADLEWKKIVEPVMRSYTEA--------TDGSNIEIKESA-----------LVWHHQDA---DPD--FG 720 (780)
Q Consensus 667 -~~-~w~~~~~~~d~~wk~~v~~i~~~~~e~--------t~gs~iE~k~~~-----------l~~hyr~a---d~d--~~ 720 (780)
+. .+.. ..+ .+.+..+++...+. ..+.+...+... +...+... ++. +.
T Consensus 79 ~~~~i~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (270)
T PRK10513 79 DGETVAQT---ALS---YDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFP 152 (270)
T ss_pred CCCEEEec---CCC---HHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCce
Confidence 32 2332 233 23344444433221 112222111100 00000000 000 00
Q ss_pred c-------ccHHHHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc
Q 003999 721 S-------CQAKELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARAC 776 (780)
Q Consensus 721 ~-------~qa~el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~ 776 (780)
. ....++...+...+. ..+.+ .++..++||.|+|+|||.|+++|++++|+++++|
T Consensus 153 k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v 215 (270)
T PRK10513 153 KVMMIDEPEILDAAIARIPAEVK-ERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEV 215 (270)
T ss_pred EEEEeCCHHHHHHHHHHhHHHhc-CcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHE
Confidence 0 011122222322222 23554 4677899999999999999999999999998665
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=8.6e-15 Score=154.07 Aligned_cols=175 Identities=17% Similarity=0.122 Sum_probs=106.4
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC--CC-ceEEecCccEEeeCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC--EM-LGIAAEHGYFIRWNK 666 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l--~~-lgliaenG~~ir~~~ 666 (780)
+.|+|++|+||||++ .+++++++++++|++|.+. |++|+|+|||++..+.+.++.. .. .++|++||++|+..+
T Consensus 4 ~~klia~DlDGTLL~---~~~~is~~~~~ai~~l~~~-Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~~ 79 (247)
T PTZ00174 4 KKTILLFDVDGTLTK---PRNPITQEMKDTLAKLKSK-GFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKDG 79 (247)
T ss_pred CCeEEEEECcCCCcC---CCCCCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEECC
Confidence 468999999999998 7778999999999999995 9999999999999999888632 12 257999999999654
Q ss_pred CCceEecCC-CcChhHHHHHHHHHHHH-H----hcCCCceeecccceEEEeeccCCC------Cc---c--cccHHHHHH
Q 003999 667 TSEWETNHL-GADLEWKKIVEPVMRSY-T----EATDGSNIEIKESALVWHHQDADP------DF---G--SCQAKELLD 729 (780)
Q Consensus 667 ~~~w~~~~~-~~d~~wk~~v~~i~~~~-~----e~t~gs~iE~k~~~l~~hyr~ad~------d~---~--~~qa~el~~ 729 (780)
+..+....+ ..+.++...+...++.+ . ....+.+++.........+..... ++ . .....++.+
T Consensus 80 ~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (247)
T PTZ00174 80 ELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFIQ 159 (247)
T ss_pred eEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHHH
Confidence 322222211 12333323333333221 0 112233433221111111110000 00 0 001123444
Q ss_pred HHHHHhcCCCeEEEE-cCeEEEEEeCCCCHHHHHHHHHHH
Q 003999 730 HLESVLANEPAVVKR-GQHIVEVKPQVLRPSSISVSLSLS 768 (780)
Q Consensus 730 ~L~~~l~~~~v~v~~-g~~~vEI~p~gvsKG~al~~Ll~~ 768 (780)
.+.+.+.+..+.... +..++||.|+|+|||.|+++|+++
T Consensus 160 ~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~ 199 (247)
T PTZ00174 160 DLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND 199 (247)
T ss_pred HHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh
Confidence 554444333333333 467999999999999999999999
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.4e-15 Score=157.22 Aligned_cols=183 Identities=15% Similarity=0.121 Sum_probs=112.7
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC--CceEEecCccEEeeCCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE--MLGIAAEHGYFIRWNKT 667 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~--~lgliaenG~~ir~~~~ 667 (780)
..++|++|+||||++ .++.++++++++|++|.+ .|+.|+|+|||+...+.+.+..+. ..++|++||+.|+...+
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l~~-~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~ 81 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRLRE-AQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQ 81 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHHHH-cCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCc
Confidence 468999999999998 556788999999999998 499999999999999999988764 24699999999987643
Q ss_pred Cc----eEecCCCcChhHHHHHHHHHHHHHhcCCCceeec--c--c---ceEEEee------ccCCCC---cccccHHHH
Q 003999 668 SE----WETNHLGADLEWKKIVEPVMRSYTEATDGSNIEI--K--E---SALVWHH------QDADPD---FGSCQAKEL 727 (780)
Q Consensus 668 ~~----w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~--k--~---~~l~~hy------r~ad~d---~~~~qa~el 727 (780)
.. +.......+ .+.+..+++...+. .+..+.. . . ......+ ...... +--...++.
T Consensus 82 ~~~~~~~~~~~~~l~---~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (271)
T PRK03669 82 WQDHPDFPRIISGIS---HGEIRQVLNTLREK-EGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDER 157 (271)
T ss_pred ccCCCCceEeecCCC---HHHHHHHHHHHHHh-cCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHH
Confidence 11 111111233 34455555544322 0111000 0 0 0000000 000000 000000112
Q ss_pred HHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCC---CCCcc-ccCC
Q 003999 728 LDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCV---RARAC-KLDD 780 (780)
Q Consensus 728 ~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i---~~~~~-~~~~ 780 (780)
...+.+.+....+.+..+..++||.|+|+|||.|+++|++++|+ +++++ -+||
T Consensus 158 ~~~~~~~l~~~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGD 214 (271)
T PRK03669 158 MAQFTARLAELGLQFVQGARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGD 214 (271)
T ss_pred HHHHHHHHHHCCCEEEecCeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcC
Confidence 22233333322466666667999999999999999999999999 77664 3444
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.3e-15 Score=153.00 Aligned_cols=167 Identities=11% Similarity=0.048 Sum_probs=107.1
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCC-CC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNK-TS 668 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~-~~ 668 (780)
.|+|++|+||||++ .++.++++++++|++|++ .|+.|+|+|||+...+.+.+..++ ..++|++||++++... +.
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~ 78 (230)
T PRK01158 3 IKAIAIDIDGTITD---KDRRLSLKAVEAIRKAEK-LGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGK 78 (230)
T ss_pred eeEEEEecCCCcCC---CCCccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCC
Confidence 47999999999998 566799999999999998 599999999999999988877664 3469999999998753 22
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhcCCCc--eeecccc----eEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEE
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGS--NIEIKES----ALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVV 742 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs--~iE~k~~----~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v 742 (780)
.+.. ...+ .+..+++...+..+.. .+..... .....+.. ....++...++.. ...+.+
T Consensus 79 ~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~--~~~~~~ 142 (230)
T PRK01158 79 RIFL--GDIE-----ECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRT-------VPVEEVRELLEEL--GLDLEI 142 (230)
T ss_pred EEEE--cchH-----HHHHHHHHHHHhccccceeeecCCcccccceeeeccc-------ccHHHHHHHHHHc--CCcEEE
Confidence 2221 1111 1223333222221111 1110000 00011111 0112233333321 123556
Q ss_pred EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 743 KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 743 ~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
..+..++||.|+|+|||.|++++++++++++++|.
T Consensus 143 ~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i 177 (230)
T PRK01158 143 VDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVA 177 (230)
T ss_pred EecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEE
Confidence 66667899999999999999999999999987654
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.62 E-value=1e-14 Score=151.89 Aligned_cols=175 Identities=20% Similarity=0.196 Sum_probs=115.4
Q ss_pred EEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCceEe
Q 003999 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSEWET 672 (780)
Q Consensus 594 I~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~w~~ 672 (780)
||+|+||||++ .+..++++++++|++|.+. |+.++++|||++..+.+++..++ ..++|++||+++....+.....
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l~~~-g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKELQEK-GIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHHHHT-TCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhhccc-ceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 6677999999999999995 99999999999999999999775 3589999999994443333221
Q ss_pred cCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEE------------------e-eccC----CCC-----cc--cc
Q 003999 673 NHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVW------------------H-HQDA----DPD-----FG--SC 722 (780)
Q Consensus 673 ~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~------------------h-yr~a----d~d-----~~--~~ 722 (780)
...+ .+.+..+++...+..-..++...+..... . .... ..+ +. ..
T Consensus 77 --~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~ 151 (254)
T PF08282_consen 77 --KPID---SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPE 151 (254)
T ss_dssp --ESB----HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHH
T ss_pred --hhee---ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccch
Confidence 1233 34455555554443211111111110000 0 0000 000 00 01
Q ss_pred cHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 723 QAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 723 qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+..++...|.+.+.+.-..+.++..++||.|+++|||.|+++|++.+|++.+++.
T Consensus 152 ~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~ 206 (254)
T PF08282_consen 152 DLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDII 206 (254)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEE
T ss_pred hhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeE
Confidence 2344555565555443234567899999999999999999999999999986653
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.4e-15 Score=145.27 Aligned_cols=143 Identities=26% Similarity=0.394 Sum_probs=112.3
Q ss_pred CCCeEEEEeccccccCChHHHHHHHHHHHHh-CCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 003999 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQ-HPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~ 410 (780)
.++++|++++|+++.||+..+++|+..+.++ .|++. |+.+|. ++.. .++..++...+.. .
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~-----~~~~----~~~~~~~~~~~~~------~ 73 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYK----LVIVGD-----GEYK----KELKNLIEKLNLK------E 73 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEE----EEEESH-----CCHH----HHHHHHHHHTTCG------T
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeE----EEEEcc-----cccc----ccccccccccccc------c
Confidence 5789999999999999999999999999875 66654 776661 2222 2334444433321 1
Q ss_pred cEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C
Q 003999 411 PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S 489 (780)
Q Consensus 411 pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~ 489 (780)
.|.++. .++.+++.++|+.||++|.||..||+|++++|||+|+ .|+|+|..+|..+.+ +
T Consensus 74 ~i~~~~-~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g-------------------~pvI~~~~~~~~e~~~~ 133 (172)
T PF00534_consen 74 NIIFLG-YVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACG-------------------CPVIASDIGGNNEIIND 133 (172)
T ss_dssp TEEEEE-SHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--------------------EEEEESSTHHHHHSGT
T ss_pred cccccc-cccccccccccccceeccccccccccccccccccccc-------------------cceeeccccCCceeecc
Confidence 366654 6678999999999999999999999999999999996 589999977777777 3
Q ss_pred --CcEEECCCCHHHHHHHHHHHHcCC
Q 003999 490 --GAIRVNPWDIDAVADAMTLAINMR 513 (780)
Q Consensus 490 --~al~VnP~d~~~~A~ai~~aL~m~ 513 (780)
.|++++|.|+++++++|.+++.++
T Consensus 134 ~~~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 134 GVNGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp TTSEEEESTTSHHHHHHHHHHHHHHH
T ss_pred ccceEEeCCCCHHHHHHHHHHHHCCH
Confidence 379999999999999999999976
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.6e-14 Score=152.79 Aligned_cols=175 Identities=18% Similarity=0.198 Sum_probs=111.8
Q ss_pred eEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCC-ce
Q 003999 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS-EW 670 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~-~w 670 (780)
+|++|+||||++ .++.++++++++|++|.+. |+.|+|+|||++..+.+.+..++ ..++|+.||+.+...++. .+
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l~~~-G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~ 76 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKLREK-GIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILY 76 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEe
Confidence 689999999999 5678999999999999995 99999999999999999888764 347999999999876432 23
Q ss_pred EecCCCcChhHHHHHHHHHHHHHhcC--------CCceeecccce-EEEe----eccC----CC-----C-ccc---ccH
Q 003999 671 ETNHLGADLEWKKIVEPVMRSYTEAT--------DGSNIEIKESA-LVWH----HQDA----DP-----D-FGS---CQA 724 (780)
Q Consensus 671 ~~~~~~~d~~wk~~v~~i~~~~~e~t--------~gs~iE~k~~~-l~~h----yr~a----d~-----d-~~~---~qa 724 (780)
.. ..+ ++.+.++++.+.+.. .+.++...... +..+ +... +. + +.. ...
T Consensus 77 ~~---~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR00099 77 KK---PLD---LDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLD 150 (256)
T ss_pred ec---CCC---HHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECC
Confidence 32 233 344555665544321 11222111000 0000 0000 00 0 000 000
Q ss_pred HHHHHHHHHHhcC----CCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 725 KELLDHLESVLAN----EPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 725 ~el~~~L~~~l~~----~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
++..+.+...+.. ..+.+ .++..++||.|+|+|||.|++++++.+++++.+|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~ 208 (256)
T TIGR00099 151 PEDLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVI 208 (256)
T ss_pred HHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEE
Confidence 1112223332321 23554 56788999999999999999999999999986654
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-14 Score=149.44 Aligned_cols=181 Identities=14% Similarity=0.084 Sum_probs=110.7
Q ss_pred eEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-C-ceEEecCccEEeeCCCCc-
Q 003999 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-M-LGIAAEHGYFIRWNKTSE- 669 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~-lgliaenG~~ir~~~~~~- 669 (780)
+|++|+||||++ .++.+++.++++|++|.+ .|+.|+++|||+...+..++..+. . .++||+||+.|+......
T Consensus 1 ~i~~DlDGTLL~---~~~~~~~~~~~~l~~l~~-~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLD---SHSYDWQPAAPWLTRLQE-AGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcC---CCCCCcHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc
Confidence 689999999998 444456669999999988 599999999999999999998764 2 469999999998753221
Q ss_pred e---EecCCCcChhHHHHHHHHHHHHHhcCCCc-eeecc--------cceEEE------eeccCCCCcccccHHHHHHHH
Q 003999 670 W---ETNHLGADLEWKKIVEPVMRSYTEATDGS-NIEIK--------ESALVW------HHQDADPDFGSCQAKELLDHL 731 (780)
Q Consensus 670 w---~~~~~~~d~~wk~~v~~i~~~~~e~t~gs-~iE~k--------~~~l~~------hyr~ad~d~~~~qa~el~~~L 731 (780)
+ .......+ | +.+.++++...+...-. ..... ...+.. ..+....-+......+..+.+
T Consensus 77 ~~~~~~~~~~~~--~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (221)
T TIGR02463 77 EPGYPRIILGIS--Y-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRF 153 (221)
T ss_pred CCCceEEecCCC--H-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHH
Confidence 1 11111222 2 33555555432210000 00000 000000 000000000000012223344
Q ss_pred HHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc-ccCC
Q 003999 732 ESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARAC-KLDD 780 (780)
Q Consensus 732 ~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~-~~~~ 780 (780)
.+.+...++.+.++..++||.|++++||.|++++++++|+++.+| ..||
T Consensus 154 ~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD 203 (221)
T TIGR02463 154 TALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATYNQPDVKTLGLGD 203 (221)
T ss_pred HHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHhCCCCCcEEEECC
Confidence 444444456666678899999999999999999999999999776 3443
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=3e-14 Score=151.66 Aligned_cols=177 Identities=15% Similarity=0.108 Sum_probs=111.3
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCC-CC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNK-TS 668 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~-~~ 668 (780)
.|+|++|+||||++ .++.++++++++|++|++ +|+.|+|+|||++..+.+.+..++ ..++|++||+.++... +.
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~ 78 (272)
T PRK10530 3 YRVIALDLDGTLLT---PKKTILPESLEALARARE-AGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKK 78 (272)
T ss_pred ccEEEEeCCCceEC---CCCccCHHHHHHHHHHHH-CCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCE
Confidence 58999999999998 667799999999999999 499999999999999999888764 3369999999999643 32
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceE------------EEe----------eccCCCCc-------
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESAL------------VWH----------HQDADPDF------- 719 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l------------~~h----------yr~ad~d~------- 719 (780)
.+.. ...+ .+.+.++++...+..-...+...+..+ .|. +...+ ++
T Consensus 79 ~l~~--~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 152 (272)
T PRK10530 79 VLEA--DPLP---VQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVD-SLAQAARQV 152 (272)
T ss_pred EEEe--cCCC---HHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcc-cHHHHHhhc
Confidence 2221 1233 345556665544321111111100000 000 00000 00
Q ss_pred c------cc--cHHHHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 G------SC--QAKELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 ~------~~--qa~el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+ .. ..+++....+.+....++.+ .++..++||.|+++|||.|++++++++|+++++|.
T Consensus 153 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i 219 (272)
T PRK10530 153 NAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVV 219 (272)
T ss_pred CCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeE
Confidence 0 00 00111112222223334443 35667899999999999999999999999986654
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.2e-14 Score=147.30 Aligned_cols=168 Identities=19% Similarity=0.147 Sum_probs=103.3
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC-C-C-ceEEecCccEEeeCCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC-E-M-LGIAAEHGYFIRWNKT 667 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l-~-~-lgliaenG~~ir~~~~ 667 (780)
++++++|+||||++ .+++++++++++|++|++ . +.|+|+|||+...+.+.|... . . .++|++||+++...++
T Consensus 7 ~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l~~-~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~ 81 (245)
T PLN02423 7 GVIALFDVDGTLTA---PRKEATPEMLEFMKELRK-V-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGK 81 (245)
T ss_pred ceEEEEeccCCCcC---CCCcCCHHHHHHHHHHHh-C-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCE
Confidence 45666999999998 677899999999999996 3 999999999999998888763 2 1 3789999999985443
Q ss_pred CceEecC-CCcChhHHHHHHHHHHHHHh--------cCCCceeecccceEEEe--eccCCC----Cccc-----ccHHHH
Q 003999 668 SEWETNH-LGADLEWKKIVEPVMRSYTE--------ATDGSNIEIKESALVWH--HQDADP----DFGS-----CQAKEL 727 (780)
Q Consensus 668 ~~w~~~~-~~~d~~wk~~v~~i~~~~~e--------~t~gs~iE~k~~~l~~h--yr~ad~----d~~~-----~qa~el 727 (780)
....... ...+ .+.++++++...+ ...+.+++..+...... +.++.. ++.. ....++
T Consensus 82 ~i~~~~l~~~l~---~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~ 158 (245)
T PLN02423 82 LIGTQSLKSFLG---EDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKM 158 (245)
T ss_pred EEEEecccccCC---HHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHHH
Confidence 2222111 1223 2334444443222 12344555333222111 122210 0000 111233
Q ss_pred HHHHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHH
Q 003999 728 LDHLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLS 766 (780)
Q Consensus 728 ~~~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll 766 (780)
...+.+.+.+..+. ..+|..++||.|+|+|||.|++.|+
T Consensus 159 ~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~ 198 (245)
T PLN02423 159 VSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE 198 (245)
T ss_pred HHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc
Confidence 34444444332343 3346789999999999999999999
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.7e-14 Score=144.05 Aligned_cols=165 Identities=13% Similarity=0.115 Sum_probs=105.2
Q ss_pred ceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCC-ceEEecCccEEeeCCCCce
Q 003999 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM-LGIAAEHGYFIRWNKTSEW 670 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~-lgliaenG~~ir~~~~~~w 670 (780)
|+|++|+||||++ .++.++++++++|++|++ +|+.|+|+|||++..+.+.+..++. .++|++||+++++.++..
T Consensus 2 k~v~~DlDGTLl~---~~~~i~~~~~~~i~~l~~-~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~- 76 (215)
T TIGR01487 2 KLVAIDIDGTLTE---PNRMISERAIEAIRKAEK-KGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI- 76 (215)
T ss_pred cEEEEecCCCcCC---CCcccCHHHHHHHHHHHH-CCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE-
Confidence 6999999999998 667899999999999998 5999999999999999998877753 369999999999865321
Q ss_pred EecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEEEcCeEEE
Q 003999 671 ETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVE 750 (780)
Q Consensus 671 ~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~vE 750 (780)
. ... ....|........ .+....-.. +.......+... .+ ..+++ ...+...++.+..+..++|
T Consensus 77 ~-~~~-~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~--~~-----~~~~~----~~~l~~~~~~~~~~~~~~e 140 (215)
T TIGR01487 77 F-LAN-MEEEWFLDEEKKK-RFPRDRLSN--EYPRASLVIMRE--GK-----DVDEV----REIIKERGLNLVDSGFAIH 140 (215)
T ss_pred E-Eec-ccchhhHHHhhhh-hhhhhhccc--ccceeEEEEecC--Cc-----cHHHH----HHHHHhCCeEEEecCceEE
Confidence 1 111 1111211000000 000000000 000011111110 01 11222 3233334566665667899
Q ss_pred EEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 751 VKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 751 I~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
|.|.+++||.+++++++.++++.++|.
T Consensus 141 i~~~~~~K~~~i~~l~~~~~i~~~~~i 167 (215)
T TIGR01487 141 IMKKGVDKGVGVEKLKELLGIKPEEVA 167 (215)
T ss_pred EecCCCChHHHHHHHHHHhCCCHHHEE
Confidence 999999999999999999999985543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.1e-14 Score=161.42 Aligned_cols=179 Identities=16% Similarity=0.109 Sum_probs=112.1
Q ss_pred hccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC---Cc-------eEEec
Q 003999 588 KTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE---ML-------GIAAE 657 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~---~l-------gliae 657 (780)
+-+.|+|++|+||||++ .+++++++++++|++|++. |+.|+|+|||++..+.+.+..+. .. ++|+.
T Consensus 305 ~~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl~ek-Gi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~ 380 (580)
T PLN02887 305 KPKFSYIFCDMDGTLLN---SKSQISETNAKALKEALSR-GVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFL 380 (580)
T ss_pred ccCccEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEee
Confidence 34689999999999998 6778999999999999995 99999999999999998887653 12 35567
Q ss_pred CccEEeeCCCC-ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEE---------Ee--ec--c---C-CC--
Q 003999 658 HGYFIRWNKTS-EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALV---------WH--HQ--D---A-DP-- 717 (780)
Q Consensus 658 nG~~ir~~~~~-~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~---------~h--yr--~---a-d~-- 717 (780)
||++|+...+. .+.. ..+ ++.+.++++...+..-...+...+..+. ++ +. . . +.
T Consensus 381 NGA~I~d~~g~~I~~~---~L~---~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 454 (580)
T PLN02887 381 QGLLVYGRQGREIYRS---NLD---QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQ 454 (580)
T ss_pred cCeEEEECCCcEEEEE---eCC---HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHH
Confidence 99999864333 2333 233 3455666655433211111111111000 00 00 0 0 00
Q ss_pred -----Cccc----ccHH----HHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 718 -----DFGS----CQAK----ELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 718 -----d~~~----~qa~----el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+... ...+ ++...+.+.+.. .+.+ .++..++||.|+|+|||.|+++|++++||+.++|.
T Consensus 455 ~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~-~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~lGI~~eevi 527 (580)
T PLN02887 455 LLAAADIQKVIFLDTAEGVSSVLRPYWSEATGD-RANVVQAQPDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIM 527 (580)
T ss_pred hhcccCeeEEEEEcChHHHHHHHHHHHHHHhcC-cEEEEEecCcEEEEecCCCCHHHHHHHHHHHcCCCHHHEE
Confidence 0000 0011 122233332222 3553 46778999999999999999999999999987653
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.1e-14 Score=143.72 Aligned_cols=165 Identities=15% Similarity=0.113 Sum_probs=104.0
Q ss_pred EEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCC--Cce
Q 003999 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKT--SEW 670 (780)
Q Consensus 594 I~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~--~~w 670 (780)
|++|+||||++ .++.++++++++|++|++ .|+.|+++|||++..+.+.+..++ ..++|++||++++..+. ..|
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 76 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKAES-VGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIF 76 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHHHH-CCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEE
Confidence 68999999998 566799999999999998 599999999999999988887765 45799999999987653 234
Q ss_pred EecCCCcChhHHHHHHHHH-HHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEEEcCeEE
Q 003999 671 ETNHLGADLEWKKIVEPVM-RSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIV 749 (780)
Q Consensus 671 ~~~~~~~d~~wk~~v~~i~-~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~v 749 (780)
... .+..|........ ..+..... .+ . .+..........++ +.+ ..+.+.+. ..+.+.++..++
T Consensus 77 ~~~---~~~~~~~~~~~~~~~~~~~~~~-~~-~-~~~~~~~~~~~~~~-------~~~-~~~~~~~~-~~~~~~~~~~~~ 141 (225)
T TIGR01482 77 LAY---LEEEWFLDIVIAKTFPFSRLKV-QY-P-RRASLVKMRYGIDV-------DTV-REIIKELG-LNLVAVDSGFDI 141 (225)
T ss_pred ecc---cCHHHHHHHHHhcccchhhhcc-cc-c-cccceEEEeecCCH-------HHH-HHHHHhcC-ceEEEecCCcEE
Confidence 432 2333432211110 00000000 00 0 00011111111111 111 11111122 123334566799
Q ss_pred EEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 750 EVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 750 EI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
||.|+++|||.+++++++++++++++|.
T Consensus 142 ei~~~~~~K~~~i~~l~~~~~i~~~~~i 169 (225)
T TIGR01482 142 HILPQGVNKGVAVKKLKEKLGIKPGETL 169 (225)
T ss_pred EEeeCCCCHHHHHHHHHHHhCCCHHHEE
Confidence 9999999999999999999999987663
|
catalyze the same reaction as SPP. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.4e-13 Score=143.88 Aligned_cols=173 Identities=14% Similarity=0.014 Sum_probs=109.5
Q ss_pred eEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCc--
Q 003999 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE-- 669 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~-- 669 (780)
+|++|+||||++ ..+...+.++++|++|.+. |+.|+++|||++..+.+++..++ ..++|++||++|+..++..
T Consensus 1 li~~DlDGTll~---~~~~~~~~~~~~i~~l~~~-g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~ 76 (256)
T TIGR01486 1 WIFTDLDGTLLD---PHGYDWGPAKEVLERLQEL-GIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTE 76 (256)
T ss_pred CEEEcCCCCCcC---CCCcCchHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccC
Confidence 689999999998 4442344689999999984 99999999999999999998774 3579999999998765422
Q ss_pred ---eEecCCCcChhHHHHHHHHHHHHHhcCCCceee-ccc--------ceE-------EEeeccCCCCcccccHHHHHHH
Q 003999 670 ---WETNHLGADLEWKKIVEPVMRSYTEATDGSNIE-IKE--------SAL-------VWHHQDADPDFGSCQAKELLDH 730 (780)
Q Consensus 670 ---w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE-~k~--------~~l-------~~hyr~ad~d~~~~qa~el~~~ 730 (780)
|.. ....+ | +.+.++++.+.+..+..+.- ... ..+ ... .....-+ .. .++..+.
T Consensus 77 ~~~~~~-~~~i~--~-~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~-~~~~~~~ 149 (256)
T TIGR01486 77 PEYPVI-ALGIP--Y-EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQR-REYSETI-LW-SEERRER 149 (256)
T ss_pred CCeEEE-EcCCC--H-HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhh-CccCCce-ec-ChHHHHH
Confidence 221 11223 2 55666666543321111100 000 000 000 0000000 00 1223344
Q ss_pred HHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCC--CCcc
Q 003999 731 LESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVR--ARAC 776 (780)
Q Consensus 731 L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~--~~~~ 776 (780)
+...+...++.+..+..++||.|+++|||.|+++|+++++++ .+++
T Consensus 150 ~~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~ 197 (256)
T TIGR01486 150 FTEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFYNQPGGAIKV 197 (256)
T ss_pred HHHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHHhhcCCCceE
Confidence 444444445666666679999999999999999999999998 6544
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.51 E-value=2e-12 Score=144.35 Aligned_cols=267 Identities=14% Similarity=0.103 Sum_probs=164.9
Q ss_pred cCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHH-hhhcCCEEEeecHHHHHHHHHHH
Q 003999 195 INPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILR-GLLNCDLIGFHTFDYARHFLSCC 273 (780)
Q Consensus 195 ~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~-~ll~~Dligf~t~~y~~~Fl~~~ 273 (780)
++.++.++|.+..-...+... .+..++++-+|-.|+..... -+....+.+ .+-.||+|...+....+++..
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~-- 170 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR-- 170 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh--
Confidence 344457888876544443333 45677777776555432110 011111222 244689988777755433311
Q ss_pred HhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHH
Q 003999 274 SRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKL 353 (780)
Q Consensus 274 ~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l 353 (780)
++ .++.++|+|+|.+.|......+.. ...+ ...++++|+++|++++.+++. +|
T Consensus 171 ------------------~~---~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll 223 (373)
T cd04950 171 ------------------LN---PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LL 223 (373)
T ss_pred ------------------CC---CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HH
Confidence 11 257789999999998753221110 0111 114678999999999966654 33
Q ss_pred HHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcce
Q 003999 354 LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAEC 433 (780)
Q Consensus 354 ~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 433 (780)
.+ +.+.+|+++ |+.||... ...+ ...+ . . ...|+++ |.++.+++.++|+.||+
T Consensus 224 ~~---la~~~p~~~----~vliG~~~--~~~~-------~~~~----~---~---~~nV~~~-G~~~~~~l~~~l~~~Dv 276 (373)
T cd04950 224 EA---LAKARPDWS----FVLIGPVD--VSID-------PSAL----L---R---LPNVHYL-GPKPYKELPAYLAGFDV 276 (373)
T ss_pred HH---HHHHCCCCE----EEEECCCc--CccC-------hhHh----c---c---CCCEEEe-CCCCHHHHHHHHHhCCE
Confidence 33 445688886 77777420 0011 0111 1 0 1237654 68999999999999999
Q ss_pred eeeccC-----CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHH
Q 003999 434 CIVNAV-----RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTL 508 (780)
Q Consensus 434 ~vvtS~-----rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~ 508 (780)
+++|+. +.++++..+||||||. |+|.|.+.++.+. .++..+.+.|.++++++|.+
T Consensus 277 ~l~P~~~~~~~~~~~P~Kl~EylA~G~-------------------PVVat~~~~~~~~-~~~~~~~~~d~~~~~~ai~~ 336 (373)
T cd04950 277 AILPFRLNELTRATSPLKLFEYLAAGK-------------------PVVATPLPEVRRY-EDEVVLIADDPEEFVAAIEK 336 (373)
T ss_pred EecCCccchhhhcCCcchHHHHhccCC-------------------CEEecCcHHHHhh-cCcEEEeCCCHHHHHHHHHH
Confidence 999986 3578999999999974 7887765544332 23444556799999999999
Q ss_pred HHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHH
Q 003999 509 AINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (780)
Q Consensus 509 aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~ 546 (780)
+|..+..++..+. .+.+.+|||..=++.+++.|..
T Consensus 337 ~l~~~~~~~~~~~---~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 337 ALLEDGPARERRR---LRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHhcCCchHHHHH---HHHHHHCCHHHHHHHHHHHHHh
Confidence 8876543333322 2268889988888888866553
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.8e-13 Score=142.98 Aligned_cols=167 Identities=16% Similarity=0.074 Sum_probs=109.0
Q ss_pred eEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC---CceEEecCccEEeeCCCCc
Q 003999 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE---MLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~---~lgliaenG~~ir~~~~~~ 669 (780)
||++|+||||++ .++.+++.+ ++++ +.+ .|+.++|+|||++..+.+.+..++ ...+|++||+.|+....
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~~~-~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~-- 72 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-GSG-DAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPE-- 72 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-hcC-CCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCC--
Confidence 689999999998 445566655 7777 555 599999999999999999998763 12489999999876432
Q ss_pred eEecCCCcChhHHHH------HHHHHHHHHhcCCCceeecccc--eEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeE
Q 003999 670 WETNHLGADLEWKKI------VEPVMRSYTEATDGSNIEIKES--ALVWHHQDADPDFGSCQAKELLDHLESVLANEPAV 741 (780)
Q Consensus 670 w~~~~~~~d~~wk~~------v~~i~~~~~e~t~gs~iE~k~~--~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~ 741 (780)
+. .+..|... ...+ ..+....+|..++.+.. ...++++.. ++.. ....++.+.+... ...+.
T Consensus 73 ~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~-~~~~~~~~~l~~~--~~~~~ 142 (236)
T TIGR02471 73 LQ-----PDRFWQKHIDHDWRRQAV-VEALADIPGLTLQDDQEQGPFKISYLLD-PEGE-PILPQIRQRLRQQ--SQAAK 142 (236)
T ss_pred CC-----CChhHHHHHhcCCCHHHH-HHHHhcCCCcEeCChhcCCCeeEEEEEC-cccc-hHHHHHHHHHHhc--cCCEE
Confidence 11 01122111 1112 33334567766666542 355666643 3211 1122333333332 12344
Q ss_pred -EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 742 -VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 742 -v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+.++..++||.|+++|||.|+++|++++++++++|.
T Consensus 143 ~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i 179 (236)
T TIGR02471 143 VILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQIL 179 (236)
T ss_pred EEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEE
Confidence 456778899999999999999999999999987654
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.7e-13 Score=152.32 Aligned_cols=186 Identities=11% Similarity=0.040 Sum_probs=116.6
Q ss_pred HHHHHHh---ccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEec
Q 003999 582 IVSAYRK---TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAE 657 (780)
Q Consensus 582 i~~~y~~---a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliae 657 (780)
+++.|.. .++|+||+|+||||++ .++..+++++++|++|++. |+.|+++|||++..+..++..+. ..++|++
T Consensus 404 ~~~~~~~~~~~~~KLIfsDLDGTLLd---~d~~i~~~t~eAL~~L~ek-GI~~VIATGRs~~~i~~l~~~Lgl~~~~I~e 479 (694)
T PRK14502 404 ARPSRLPSSGQFKKIVYTDLDGTLLN---PLTYSYSTALDALRLLKDK-ELPLVFCSAKTMGEQDLYRNELGIKDPFITE 479 (694)
T ss_pred hhcccCCCcCceeeEEEEECcCCCcC---CCCccCHHHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHHcCCCCeEEEc
Confidence 4444553 3578999999999999 4555677899999999985 99999999999999999888764 3479999
Q ss_pred CccEEeeCCCC------------ceEecCCCcChhHHHHHHHHHHHHHhcCC----------CceeecccceEEEe----
Q 003999 658 HGYFIRWNKTS------------EWETNHLGADLEWKKIVEPVMRSYTEATD----------GSNIEIKESALVWH---- 711 (780)
Q Consensus 658 nG~~ir~~~~~------------~w~~~~~~~d~~wk~~v~~i~~~~~e~t~----------gs~iE~k~~~l~~h---- 711 (780)
||+.|+.+++. .+.-.....+ .+.+.++++...+... ..++..... ..+.
T Consensus 480 NGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~---~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d-~~~~ei~~ 555 (694)
T PRK14502 480 NGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMA---YKDIRHILKKALAEACTEIENSEKAGNIFITSFGD-MSVEDVSR 555 (694)
T ss_pred CCCEEEECCCcccccccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCc-ccHHHHHH
Confidence 99999986530 1111111223 2334444444333110 111111100 0000
Q ss_pred ec--------cCC-CCcc---cc-cHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc
Q 003999 712 HQ--------DAD-PDFG---SC-QAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARAC 776 (780)
Q Consensus 712 yr--------~ad-~d~~---~~-qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~ 776 (780)
+. .+. .++. .+ ...+.++.+.+.+...++.+..|..++||. +++|||.|+++|++.++++..++
T Consensus 556 ~TgL~~~~a~~a~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~gI~~~eV 632 (694)
T PRK14502 556 LTDLNLKQAELAKQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSFGGRFYEVT-GGNDKGKAIKILNELFRLNFGNI 632 (694)
T ss_pred hhCCCHHHHHHHhhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHhCCCccce
Confidence 00 000 0000 00 112334555555555567777799999999 59999999999999999986543
|
|
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=2e-13 Score=143.78 Aligned_cols=221 Identities=18% Similarity=0.165 Sum_probs=158.4
Q ss_pred CCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEE
Q 003999 221 NRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIK 300 (780)
Q Consensus 221 ~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~ 300 (780)
...++.|+=|+-|--.++-.. +--.++-|. |....|.+++++.++.+. .+.-.-...+|.
T Consensus 113 MGlktVfTdHSlfGfad~~si-----------~~n~ll~~s--------L~~id~~IcVshtskent-vlr~~L~p~kvs 172 (426)
T KOG1111|consen 113 MGLKTVFTDHSLFGFADIGSI-----------LTNKLLPLS--------LANIDRIICVSHTSKENT-VLRGALAPAKVS 172 (426)
T ss_pred cCceEEEeccccccccchhhh-----------hhcceeeee--------ecCCCcEEEEeecCCCce-EEEeccCHhHee
Confidence 468999999986642222111 111122211 334456667777776653 222222345789
Q ss_pred EeecCCCchhhhhhcCCchhHHHHHHHHHHc-CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCC
Q 003999 301 ILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPA 379 (780)
Q Consensus 301 i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~ 379 (780)
++|+.++...|.+.... +. .+...|+.++||-+.||+++++..+.++.++||+.+ ++.+|
T Consensus 173 vIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vr----fii~G--- 233 (426)
T KOG1111|consen 173 VIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVR----FIIIG--- 233 (426)
T ss_pred eccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhcCCCee----EEEec---
Confidence 99999999999874321 22 355889999999999999999999999999999988 88665
Q ss_pred CCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCc
Q 003999 380 RGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPI 459 (780)
Q Consensus 380 r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~ 459 (780)
+||..-.+++.+++. +- ..+|+++ |.++++++-..|..-|||+.||+.|.|+++..||+.||.
T Consensus 234 --DGPk~i~lee~lEk~----~l------~~rV~~l-G~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL---- 296 (426)
T KOG1111|consen 234 --DGPKRIDLEEMLEKL----FL------QDRVVML-GTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGL---- 296 (426)
T ss_pred --CCcccchHHHHHHHh----hc------cCceEEe-cccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCCC----
Confidence 566443444333333 11 1367754 689999999999999999999999999999999999973
Q ss_pred cccccccCCCCCCCceEEEcCCCCccccCCCc-EEECCCCHHHHHHHHHHHHcC
Q 003999 460 MDEALGRERDSPHTSMLVVSEFIGCSPSLSGA-IRVNPWDIDAVADAMTLAINM 512 (780)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-l~VnP~d~~~~A~ai~~aL~m 512 (780)
++|.+..+|..+.|... +..-+-.++++++++.+|++.
T Consensus 297 ---------------~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai~~ 335 (426)
T KOG1111|consen 297 ---------------PVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAITK 335 (426)
T ss_pred ---------------EEEEeecCCccccCCccceeccCCChHHHHHHHHHHHHH
Confidence 77888888888888543 445666889999998888864
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.7e-12 Score=138.73 Aligned_cols=178 Identities=15% Similarity=0.069 Sum_probs=112.2
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCC-
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS- 668 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~- 668 (780)
.|+|++|+||||++ .+..++++++++|++|.+ .|+.|+|+|||+...+...+..+. ..++|++||++|+..++.
T Consensus 4 ~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l~~-~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~ 79 (273)
T PRK00192 4 KLLVFTDLDGTLLD---HHTYSYEPAKPALKALKE-KGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYF 79 (273)
T ss_pred ceEEEEcCcccCcC---CCCcCcHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEeccccc
Confidence 57999999999998 455677889999999998 499999999999999999888764 236999999999865331
Q ss_pred ------------ceEecCCCcChhHHHHHHHHHHHHHhcCCCce-eecc----c----ceEEE---e-eccCCC--Cccc
Q 003999 669 ------------EWETNHLGADLEWKKIVEPVMRSYTEATDGSN-IEIK----E----SALVW---H-HQDADP--DFGS 721 (780)
Q Consensus 669 ------------~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~-iE~k----~----~~l~~---h-yr~ad~--d~~~ 721 (780)
.|... ...+ ++.+.++++.+.......+ .... + ..+.. . .+.... -+..
T Consensus 80 ~~~~~~~~~~~~~~~~~-~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (273)
T PRK00192 80 PFQPDGERLKGDYWVIE-LGPP---YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLW 155 (273)
T ss_pred ccCCccccccCCceEEE-cCCC---HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceee
Confidence 23211 1122 2445555543322111000 0000 0 00000 0 000000 0000
Q ss_pred ccHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCC-Cccc
Q 003999 722 CQAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVRA-RACK 777 (780)
Q Consensus 722 ~qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~-~~~~ 777 (780)
....+..+.+...+...++.+.+++.++||.|.+ +||.|+++|++.+++++ .+|.
T Consensus 156 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~ 211 (273)
T PRK00192 156 NGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELYRRQDGVETI 211 (273)
T ss_pred cCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHHhccCCceEE
Confidence 0012334444544544567777778899999999 99999999999999998 7664
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.6e-12 Score=136.61 Aligned_cols=164 Identities=12% Similarity=0.050 Sum_probs=108.9
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~ 669 (780)
.|+||+|+||||++ .+...++.++++|++|++. |+.|+++|||++..+..++..+. ..++|++||+.|..+.+
T Consensus 1 ~KLIftDLDGTLLd---~~~~~~~~a~~aL~~Lk~~-GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~-- 74 (302)
T PRK12702 1 MRLVLSSLDGSLLD---LEFNSYGAARQALAALERR-SIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEH-- 74 (302)
T ss_pred CcEEEEeCCCCCcC---CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccc--
Confidence 37999999999999 4556778899999999995 99999999999999999888764 33799999999997643
Q ss_pred eEec-C-----CCcChhH-------HHHHHHHHHHHHhcCCCce------------------ee------cccceEEEee
Q 003999 670 WETN-H-----LGADLEW-------KKIVEPVMRSYTEATDGSN------------------IE------IKESALVWHH 712 (780)
Q Consensus 670 w~~~-~-----~~~d~~w-------k~~v~~i~~~~~e~t~gs~------------------iE------~k~~~l~~hy 712 (780)
|... . ...+..| ...++.+++...+.....+ .+ .++.+-.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w 154 (302)
T PRK12702 75 YFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSY 154 (302)
T ss_pred cccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEe
Confidence 2200 0 0001111 2334444443332211111 01 1122222222
Q ss_pred ccCCCCcccccHHHHHHHHHHHhcCCCeEEEEcCeEEEEEe------------------C---CCCHHHHHHHHHHHcCC
Q 003999 713 QDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKP------------------Q---VLRPSSISVSLSLSVCV 771 (780)
Q Consensus 713 r~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p------------------~---gvsKG~al~~Ll~~l~i 771 (780)
...+ ..+ .+.++..++.++.|..|+.+.. . +.+||.|+++|.+.+.-
T Consensus 155 ~~~~--------~~~----~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~ 222 (302)
T PRK12702 155 SGDP--------ARL----REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQR 222 (302)
T ss_pred cCCH--------HHH----HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHh
Confidence 2211 112 4455667889999999998887 5 89999999999999876
Q ss_pred C
Q 003999 772 R 772 (780)
Q Consensus 772 ~ 772 (780)
.
T Consensus 223 ~ 223 (302)
T PRK12702 223 H 223 (302)
T ss_pred c
Confidence 4
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.4e-12 Score=144.81 Aligned_cols=178 Identities=15% Similarity=0.143 Sum_probs=108.3
Q ss_pred HhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHH-HHhccCCCCEEEEEcCCChhhHHHHhccCC---CceEEecCccEE
Q 003999 587 RKTERRAIFLDYDGTVVPETSIIKSPGPEVISVL-KTLCSDPNNTVFIVSGRGRSSLSEWLAPCE---MLGIAAEHGYFI 662 (780)
Q Consensus 587 ~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L-~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~---~lgliaenG~~i 662 (780)
..+.+.+|++|+||||++.. .++..+...+..| +++.+ .|+.++++|||+...+.++.+.++ ...+|+.||+.|
T Consensus 5 ~~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~~~-~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I 82 (413)
T PLN02382 5 SGSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAEYR-HDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEI 82 (413)
T ss_pred cCCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHhhc-CCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEE
Confidence 34567899999999999842 1346665555555 88887 599999999999877777655432 223778899999
Q ss_pred eeCCC----CceEecCCCcChhHHH-HHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcC
Q 003999 663 RWNKT----SEWETNHLGADLEWKK-IVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLAN 737 (780)
Q Consensus 663 r~~~~----~~w~~~~~~~d~~wk~-~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~ 737 (780)
...+. ..|... .+..|.. .+...+..|.........+.+...+.+.+.+. .+.++...+.+.+..
T Consensus 83 ~~~~~~~~d~~w~~~---l~~~w~~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~-------~~~~~~~~l~~~~~~ 152 (413)
T PLN02382 83 AYGESMVPDHGWVEY---LNKKWDREIVVEETSKFPELKLQPETEQRPHKVSFYVDKK-------KAQEVIKELSERLEK 152 (413)
T ss_pred EeCCCCccChhHHHH---HhccCChhhHHHHHhcCCCcccCCcccCCCeEEEEEechH-------HhHHHHHHHHHHHHh
Confidence 87542 112211 1122322 12222222211111222233334444544321 123344555554543
Q ss_pred C--CeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHc---CCCCCcc
Q 003999 738 E--PAV-VKRGQHIVEVKPQVLRPSSISVSLSLSV---CVRARAC 776 (780)
Q Consensus 738 ~--~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l---~i~~~~~ 776 (780)
. .+. +.++..++||.|+++|||.|+++|++++ |+++.+|
T Consensus 153 ~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~ 197 (413)
T PLN02382 153 RGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNT 197 (413)
T ss_pred cCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcE
Confidence 2 344 3578899999999999999999999999 8988654
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.9e-11 Score=132.45 Aligned_cols=190 Identities=12% Similarity=0.120 Sum_probs=123.0
Q ss_pred EEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCChHHHHHHHHHHHHh----CCCCCCce
Q 003999 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGISLKLLAMEQLLQQ----HPGMRGKV 370 (780)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~----~P~~~~~v 370 (780)
+|.+++++|+.+.+... + ...++++++ +++++|+.+||....||+...++++..++.. .|+.+
T Consensus 174 ki~v~g~~v~~~f~~~~---~----~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~--- 243 (382)
T PLN02605 174 QIRVYGLPIRPSFARAV---R----PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ--- 243 (382)
T ss_pred HEEEECcccCHhhccCC---C----CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---
Confidence 56667888886533221 1 123466777 4689999999999999999999999876521 34433
Q ss_pred EEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhh
Q 003999 371 VLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKY 450 (780)
Q Consensus 371 vLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea 450 (780)
++.+++ +++ ++++++++... + ..|.+ .|.+ +++..+|++||++|.+| .++++.||
T Consensus 244 -~~vi~G----~~~---~~~~~L~~~~~------~----~~v~~-~G~~--~~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 244 -VVVICG----RNK---KLQSKLESRDW------K----IPVKV-RGFV--TNMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred -EEEEEC----CCH---HHHHHHHhhcc------c----CCeEE-Eecc--ccHHHHHHhCCEEEECC----CcchHHHH
Confidence 333442 222 22333333210 1 13554 4555 47999999999999866 37899999
Q ss_pred hhcccCCCccccccccCCCCCCCceEEEcCCC-----CccccC-CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 003999 451 IVCRQGTPIMDEALGRERDSPHTSMLVVSEFI-----GCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKH 524 (780)
Q Consensus 451 ~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-----G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~ 524 (780)
|||+ .|+|++... |-.+.+ .++.-+.+.|+++++++|.+++.+.++.++.+.+..
T Consensus 299 ma~g-------------------~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~ 359 (382)
T PLN02605 299 LIRG-------------------LPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENA 359 (382)
T ss_pred HHcC-------------------CCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 9997 488888752 323334 333333458999999999999997444555555667
Q ss_pred hhHhhhCCHHHHHHHHH
Q 003999 525 YRYVSTHDVAYWARSFA 541 (780)
Q Consensus 525 ~~~V~~~~~~~Wa~~~l 541 (780)
+++...+....-++.++
T Consensus 360 ~~~~~~~a~~~i~~~l~ 376 (382)
T PLN02605 360 LKLARPEAVFDIVHDLH 376 (382)
T ss_pred HHhcCCchHHHHHHHHH
Confidence 77777776655555443
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.7e-12 Score=130.21 Aligned_cols=179 Identities=15% Similarity=0.084 Sum_probs=104.7
Q ss_pred eEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCC---
Q 003999 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS--- 668 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~--- 668 (780)
+|++|+||||++ .+. .+++++++|++|++. |+.|+++|||++..+..++..+. ..++|++||++|..+.+.
T Consensus 1 li~~DlDGTLl~---~~~-~~~~~~~ai~~l~~~-G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~ 75 (225)
T TIGR02461 1 VIFTDLDGTLLP---PGY-EPGPAREALEELKDL-GFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPF 75 (225)
T ss_pred CEEEeCCCCCcC---CCC-CchHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccc
Confidence 689999999998 223 455799999999995 99999999999999999887764 347999999999986421
Q ss_pred ---------ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeec---c----cceEEEeeccC--CCCccc---ccHHHH
Q 003999 669 ---------EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEI---K----ESALVWHHQDA--DPDFGS---CQAKEL 727 (780)
Q Consensus 669 ---------~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~---k----~~~l~~hyr~a--d~d~~~---~qa~el 727 (780)
...-.....+ ++.++++++...+..+-.+... . -..+.....+. +.++.. ...++.
T Consensus 76 ~~~~~~~~~~~~i~~~~l~---~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~e~ 152 (225)
T TIGR02461 76 PVGAGREVGNYEVIELGKP---VAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLWSREG 152 (225)
T ss_pred cccccccCCCeEEEEcCCC---HHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCCCHHH
Confidence 1111111233 2344555544433111000000 0 00000000000 000000 001122
Q ss_pred HHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCC--CCc-cccCC
Q 003999 728 LDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVR--ARA-CKLDD 780 (780)
Q Consensus 728 ~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~--~~~-~~~~~ 780 (780)
...+.+.+....+.+.++..++++. .++|||.|++.|++.+++. +.+ +.+||
T Consensus 153 ~~~~~~~~~~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~~~~~~~~~~i~~GD 207 (225)
T TIGR02461 153 WEAILVTARARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLYKLRPGAIESVGLGD 207 (225)
T ss_pred HHHHHHHHHHcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHhccccCcccEEEEcC
Confidence 2233333334457777788888875 5999999999999999884 433 55555
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.3e-13 Score=139.32 Aligned_cols=173 Identities=16% Similarity=0.194 Sum_probs=102.8
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC--C-CceEEecCccEEeeCCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC--E-MLGIAAEHGYFIRWNKT 667 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l--~-~lgliaenG~~ir~~~~ 667 (780)
++||++|+||||++ .+..-.+++.+.++ ....+++.++++|||+.+...+.+... | ...+|+.+|+.|++..
T Consensus 2 ~~ll~sDlD~Tl~~---~~~~~~~~l~~~l~-~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~- 76 (247)
T PF05116_consen 2 PRLLASDLDGTLID---GDDEALARLEELLE-QQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGE- 76 (247)
T ss_dssp SEEEEEETBTTTBH---CHHHHHHHHHHHHH-HHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESS-
T ss_pred CEEEEEECCCCCcC---CCHHHHHHHHHHHH-HhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcC-
Confidence 57999999999993 11122345555555 223468999999999999999888753 1 2469999999999843
Q ss_pred CceEecC---CCcChhHHH-HHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCCCe--E
Q 003999 668 SEWETNH---LGADLEWKK-IVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPA--V 741 (780)
Q Consensus 668 ~~w~~~~---~~~d~~wk~-~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v--~ 741 (780)
.|.... ...+..|.. .++++++.+.+-.+....+.....+++.+...+. ...++.|+..+...++ .
T Consensus 77 -~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~-------~~~~~~i~~~l~~~~l~~~ 148 (247)
T PF05116_consen 77 -NWQPDEEWQAHIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDS-------ADILEEIRARLRQRGLRVN 148 (247)
T ss_dssp -TTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSH-------CHHHHHHHHHHHCCTCEEE
T ss_pred -CCcChHHHHHHHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccc-------hhHHHHHHHHHHHcCCCee
Confidence 333210 011223433 3444444333222222122233455555554321 2334566666655554 4
Q ss_pred E-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc
Q 003999 742 V-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARAC 776 (780)
Q Consensus 742 v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~ 776 (780)
+ .++..+++|.|+++|||.|+++|+++++++...+
T Consensus 149 ~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~v 184 (247)
T PF05116_consen 149 VIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQV 184 (247)
T ss_dssp EEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGE
T ss_pred EEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHE
Confidence 3 4688999999999999999999999999987554
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=2e-09 Score=120.37 Aligned_cols=271 Identities=10% Similarity=0.053 Sum_probs=158.3
Q ss_pred HHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeec
Q 003999 183 ANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHT 262 (780)
Q Consensus 183 vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t 262 (780)
.+..-..++++..+| |+|+.| +....++.+.+....++|+....+-..+. ..-+ .-.+|.+...+
T Consensus 91 ~~~~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~---------~~~~---~~~ad~i~~~s 155 (380)
T PRK13609 91 FGRKRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLH---------KIWV---HREVDRYFVAT 155 (380)
T ss_pred HHHHHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCC---------cccc---cCCCCEEEECC
Confidence 333334566666777 888885 66666777666655567765333211111 0011 11588888777
Q ss_pred HHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCch-hhhhhcCCchhHHHHHHHHHHc---CCCe-EE
Q 003999 263 FDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMG-RLESVLNLPATATKIKEIEKQF---DGKK-LI 337 (780)
Q Consensus 263 ~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~-~~~~~~~~~~~~~~~~~lr~~~---~~~~-vi 337 (780)
....+.+.+ .|+. ..+|.++ |++.. .|.... + ...+++++ ++++ ++
T Consensus 156 ~~~~~~l~~-----~gi~---------------~~ki~v~--G~p~~~~f~~~~---~----~~~~~~~~~l~~~~~~il 206 (380)
T PRK13609 156 DHVKKVLVD-----IGVP---------------PEQVVET--GIPIRSSFELKI---N----PDIIYNKYQLCPNKKILL 206 (380)
T ss_pred HHHHHHHHH-----cCCC---------------hhHEEEE--CcccChHHcCcC---C----HHHHHHHcCCCCCCcEEE
Confidence 654444432 1321 1123333 44332 232211 1 12345665 2444 55
Q ss_pred EEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecC
Q 003999 338 LGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDR 417 (780)
Q Consensus 338 l~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~ 417 (780)
+..|++...||+...++++.+ .|+++ ++.+++. +++ ++++++++++.. + ..|+++ +
T Consensus 207 ~~~G~~~~~k~~~~li~~l~~----~~~~~----~viv~G~---~~~----~~~~l~~~~~~~----~----~~v~~~-g 262 (380)
T PRK13609 207 IMAGAHGVLGNVKELCQSLMS----VPDLQ----VVVVCGK---NEA----LKQSLEDLQETN----P----DALKVF-G 262 (380)
T ss_pred EEcCCCCCCcCHHHHHHHHhh----CCCcE----EEEEeCC---CHH----HHHHHHHHHhcC----C----CcEEEE-e
Confidence 667889889999988887642 36554 6666531 122 234444444332 2 236665 5
Q ss_pred CCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcC-CCCcc----ccC-CCc
Q 003999 418 PVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE-FIGCS----PSL-SGA 491 (780)
Q Consensus 418 ~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~----~~l-~~a 491 (780)
.+ +++..+|+.||++|. ++.|++..|||+||. |+|++. ..|.. ..+ ..|
T Consensus 263 ~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g~-------------------PvI~~~~~~g~~~~n~~~~~~~G 317 (380)
T PRK13609 263 YV--ENIDELFRVTSCMIT----KPGGITLSEAAALGV-------------------PVILYKPVPGQEKENAMYFERKG 317 (380)
T ss_pred ch--hhHHHHHHhccEEEe----CCCchHHHHHHHhCC-------------------CEEECCCCCCcchHHHHHHHhCC
Confidence 55 468899999999874 455899999999974 777765 33421 122 234
Q ss_pred EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHH
Q 003999 492 IRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 492 l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
..+.+.|.++++++|.+++++++ .+..+.+..+++...+++...++.+++.+...
T Consensus 318 ~~~~~~~~~~l~~~i~~ll~~~~-~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 318 AAVVIRDDEEVFAKTEALLQDDM-KLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred cEEEECCHHHHHHHHHHHHCCHH-HHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 44556799999999999998754 34444455666777788888888877665543
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.24 E-value=5.4e-10 Score=125.25 Aligned_cols=185 Identities=15% Similarity=0.131 Sum_probs=139.2
Q ss_pred CeEEEEeccccccCChHHHHHHHHHHHHhCCCCCC-ceEEEEEEcC-CCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 334 KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRG-KVVLVQIVNP-ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~-~vvLvqi~~p-~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
..+...+.|+.+-||+.+.|.||..+...-|+..- ...++..+++ ..+...+..++.+++.+++++.+. +| .
T Consensus 273 d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l-~g-----~ 346 (495)
T KOG0853|consen 273 DRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL-LG-----Q 346 (495)
T ss_pred ceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc-cC-----c
Confidence 67889999999999999999999999887755111 2334444433 223334445566777888876532 23 2
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C-
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S- 489 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~- 489 (780)
++++....++.+...+++.+.+..+++..|-||+|++|||+|+ .|+|++..+|..+.+ +
T Consensus 347 ~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~g-------------------lPvvAt~~GGP~EiV~~~ 407 (495)
T KOG0853|consen 347 FVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACG-------------------LPVVATNNGGPAEIVVHG 407 (495)
T ss_pred eEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcC-------------------CCEEEecCCCceEEEEcC
Confidence 5556567788888888888888888888899999999999997 489999999999988 3
Q ss_pred -CcEEECCCCHH---HHHHHHHHHHcCCHHHHHHHHHHHhhHhhh-CCHHHHHHHHHHHHHHHHH
Q 003999 490 -GAIRVNPWDID---AVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQDLERACR 549 (780)
Q Consensus 490 -~al~VnP~d~~---~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~~~l~~l~~~~~ 549 (780)
.|++++| +.+ .+|++|.++.+.|.. +.+..+.+++.|.+ +++ +.|.+.+.....
T Consensus 408 ~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l-~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~~ 466 (495)
T KOG0853|consen 408 VTGLLIDP-GQEAVAELADALLKLRRDPEL-WARMGKNGLKRVKEMFSW----QHYSERIASVLG 466 (495)
T ss_pred CcceeeCC-chHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHHhH----HHHHHHHHHHhH
Confidence 5999999 776 599999999998864 66666779999988 655 555555555433
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.6e-10 Score=120.16 Aligned_cols=197 Identities=20% Similarity=0.275 Sum_probs=140.4
Q ss_pred EEEEeecCCCchhhhhh-cCCchhHHHHHHHHHHcCC--CeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEE
Q 003999 298 YIKILPVGVHMGRLESV-LNLPATATKIKEIEKQFDG--KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (780)
Q Consensus 298 ~i~i~P~GId~~~~~~~-~~~~~~~~~~~~lr~~~~~--~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (780)
.+.+.|+|++...+... .. ...+ +.++++++|+++.||+...++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPARIG-------------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCccccC-------------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 56788999999887642 00 0112 47999999999999999999999999877666 33666
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcc
Q 003999 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 375 i~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
+|... +. ...+..++...+.. ..|.+ .+.++.+++..+|+.||++++||..||||++.+|||+||
T Consensus 236 ~g~~~-----~~---~~~~~~~~~~~~~~------~~v~~-~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g 300 (381)
T COG0438 236 VGDGP-----ER---REELEKLAKKLGLE------DNVKF-LGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAG 300 (381)
T ss_pred EcCCC-----cc---HHHHHHHHHHhCCC------CcEEE-ecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhcC
Confidence 65322 11 12223344333221 12554 677888889999999999999999999999999999996
Q ss_pred cCCCccccccccCCCCCCCceEEEcCCCCccccCC-C--cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hh
Q 003999 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-G--AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-ST 530 (780)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~ 530 (780)
.|+|+|...|..+.+. + |+++++.|++++++++..+++++ +.++...+..++.+ ..
T Consensus 301 -------------------~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~ 360 (381)
T COG0438 301 -------------------TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEE 360 (381)
T ss_pred -------------------CcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHh
Confidence 4889999998888884 3 77888888999999999999987 23333333234444 46
Q ss_pred CCHHHHHHHHHHHHHH
Q 003999 531 HDVAYWARSFAQDLER 546 (780)
Q Consensus 531 ~~~~~Wa~~~l~~l~~ 546 (780)
+++..-++.+..-+..
T Consensus 361 ~~~~~~~~~~~~~~~~ 376 (381)
T COG0438 361 FSWERIAEQLLELYEE 376 (381)
T ss_pred cCHHHHHHHHHHHHHH
Confidence 7766666555554444
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.4e-10 Score=115.95 Aligned_cols=111 Identities=15% Similarity=0.220 Sum_probs=81.6
Q ss_pred EeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCC
Q 003999 339 GIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRP 418 (780)
Q Consensus 339 ~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~ 418 (780)
++||+.+.||+...++|+..+.+++|+++ |+.+|... +....+ .+... .+. ...|.++. .
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~-----~~~~~~----~~~~~----~~~--~~~v~~~~-~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP-----EREYLE----ELLAA----LLL--LDRVIFLG-G 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC-----ChHHHH----HHHHh----cCC--cccEEEeC-C
Confidence 89999999999999999999988888765 88777422 111111 11111 111 12476665 4
Q ss_pred C-CHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC
Q 003999 419 V-PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL 488 (780)
Q Consensus 419 v-~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (780)
+ +.+++..+++.||+++.||..||+++..+|||+|+ .|+|+|+..|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g-------------------~pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACG-------------------LPVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCC-------------------CCEEEcCCCCcceEE
Confidence 4 55666777777999999999999999999999996 489999998877655
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=8.6e-10 Score=122.09 Aligned_cols=257 Identities=14% Similarity=0.074 Sum_probs=156.7
Q ss_pred HHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHH
Q 003999 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARH 268 (780)
Q Consensus 189 ~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~ 268 (780)
.++++..+| |+|+.|+....+... +..+..+.|+.++.|..+|.. .+.++ .-.+|.+...+.+-
T Consensus 84 ~~~ik~~~p--Dvv~~~~~~~~~~~~-~~~~~~~~p~v~~~~~~~~~~--------~~r~~--~~~~d~ii~~~~~~--- 147 (357)
T PRK00726 84 RKILKRFKP--DVVVGFGGYVSGPGG-LAARLLGIPLVIHEQNAVPGL--------ANKLL--ARFAKKVATAFPGA--- 147 (357)
T ss_pred HHHHHhcCC--CEEEECCCcchhHHH-HHHHHcCCCEEEEcCCCCccH--------HHHHH--HHHhchheECchhh---
Confidence 344555566 999999865544444 444556788887766555421 01111 11345544333210
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc-CCCeEEEEeccccccC
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDIFK 347 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~~~~vil~Vdrld~~K 347 (780)
+. . ....++.++|+|+|.+.+.+. .. ..++ .. ++.++|+.+++....|
T Consensus 148 ~~--------------------~--~~~~~i~vi~n~v~~~~~~~~----~~---~~~~--~~~~~~~~i~~~gg~~~~~ 196 (357)
T PRK00726 148 FP--------------------E--FFKPKAVVTGNPVREEILALA----AP---PARL--AGREGKPTLLVVGGSQGAR 196 (357)
T ss_pred hh--------------------c--cCCCCEEEECCCCChHhhccc----ch---hhhc--cCCCCCeEEEEECCcHhHH
Confidence 00 0 112468899999998765421 10 0111 12 3678889999999999
Q ss_pred ChHHHH-HHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHH
Q 003999 348 GISLKL-LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (780)
Q Consensus 348 Gi~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~a 426 (780)
++...+ +|++++.+ .| .+++++|. ++. +++.+++ + .+. . |.+. +.+ ++...
T Consensus 197 ~~~~~l~~a~~~~~~-~~-----~~~~~~G~-----g~~-~~~~~~~----~-----~~~---~-v~~~-g~~--~~~~~ 248 (357)
T PRK00726 197 VLNEAVPEALALLPE-AL-----QVIHQTGK-----GDL-EEVRAAY----A-----AGI---N-AEVV-PFI--DDMAA 248 (357)
T ss_pred HHHHHHHHHHHHhhh-Cc-----EEEEEcCC-----CcH-HHHHHHh----h-----cCC---c-EEEe-ehH--hhHHH
Confidence 987776 88887743 22 33555552 221 2222221 1 121 2 4443 444 68999
Q ss_pred HHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCc--------cccC---CCcEEEC
Q 003999 427 YYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC--------SPSL---SGAIRVN 495 (780)
Q Consensus 427 ly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--------~~~l---~~al~Vn 495 (780)
+|+.||+++.+| | +.+.+|||+||. |+|++-..|. ++.+ ..|++++
T Consensus 249 ~~~~~d~~i~~~---g-~~~~~Ea~~~g~-------------------Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~ 305 (357)
T PRK00726 249 AYAAADLVICRA---G-ASTVAELAAAGL-------------------PAILVPLPHAADDHQTANARALVDAGAALLIP 305 (357)
T ss_pred HHHhCCEEEECC---C-HHHHHHHHHhCC-------------------CEEEecCCCCCcCcHHHHHHHHHHCCCEEEEE
Confidence 999999999877 3 588999999974 6666544221 2334 2378898
Q ss_pred CCC--HHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHH
Q 003999 496 PWD--IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDL 544 (780)
Q Consensus 496 P~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l 544 (780)
|.| +++++++|.+++++++ .++...+..+++..+.+...-++.+++.+
T Consensus 306 ~~~~~~~~l~~~i~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 306 QSDLTPEKLAEKLLELLSDPE-RLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred cccCCHHHHHHHHHHHHcCHH-HHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 888 9999999999999753 45555556777787788777777766544
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.7e-09 Score=116.31 Aligned_cols=246 Identities=16% Similarity=0.145 Sum_probs=146.6
Q ss_pred HHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHH
Q 003999 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARH 268 (780)
Q Consensus 189 ~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~ 268 (780)
.++++..+| |+|+.|..... ++..+..+..++|+.++-|..||. .. +.++ ...+|.|...+....+.
T Consensus 82 ~~~i~~~~p--DvI~~~~~~~~-~~~~~~a~~~~~p~v~~~~~~~~~--~~------~~~~--~~~~~~vi~~s~~~~~~ 148 (350)
T cd03785 82 RKILKKFKP--DVVVGFGGYVS-GPVGLAAKLLGIPLVIHEQNAVPG--LA------NRLL--ARFADRVALSFPETAKY 148 (350)
T ss_pred HHHHHhcCC--CEEEECCCCcc-hHHHHHHHHhCCCEEEEcCCCCcc--HH------HHHH--HHhhCEEEEcchhhhhc
Confidence 345555666 89999876543 333444445577887665555542 10 1111 11267776655532211
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccc
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDI 345 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~ 345 (780)
+ ...++.++|+|+|.+.+... + . ++++ +++++++.+++...
T Consensus 149 -----------------------~--~~~~~~~i~n~v~~~~~~~~---~----~----~~~~~~~~~~~~i~~~~g~~~ 192 (350)
T cd03785 149 -----------------------F--PKDKAVVTGNPVREEILALD---R----E----RARLGLRPGKPTLLVFGGSQG 192 (350)
T ss_pred -----------------------C--CCCcEEEECCCCchHHhhhh---h----h----HHhcCCCCCCeEEEEECCcHh
Confidence 0 12356788999998766431 0 0 3333 46778888888777
Q ss_pred cCChHHHH-HHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHH
Q 003999 346 FKGISLKL-LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEK 424 (780)
Q Consensus 346 ~KGi~~~l-~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el 424 (780)
.||...++ .|++.+. + ++ +.++.+++ .+ +.+++++ .+++. + ..|+++ +.+ +++
T Consensus 193 ~~~~~~~l~~a~~~l~-~-~~----~~~~~i~G----~g-~~~~l~~----~~~~~----~----~~v~~~-g~~--~~~ 246 (350)
T cd03785 193 ARAINEAVPEALAELL-R-KR----LQVIHQTG----KG-DLEEVKK----AYEEL----G----VNYEVF-PFI--DDM 246 (350)
T ss_pred HHHHHHHHHHHHHHhh-c-cC----eEEEEEcC----Cc-cHHHHHH----HHhcc----C----CCeEEe-ehh--hhH
Confidence 88876655 7777663 2 32 33333332 22 2233333 33221 1 125544 343 789
Q ss_pred HHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----c----cccC---CCcEE
Q 003999 425 SAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----C----SPSL---SGAIR 493 (780)
Q Consensus 425 ~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~----~~~l---~~al~ 493 (780)
..+|+.||++|.+| | +.+++|||+||. |+|++...| + ++.+ ..|++
T Consensus 247 ~~~l~~ad~~v~~s---g-~~t~~Eam~~G~-------------------Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~ 303 (350)
T cd03785 247 AAAYAAADLVISRA---G-ASTVAELAALGL-------------------PAILIPLPYAADDHQTANARALVKAGAAVL 303 (350)
T ss_pred HHHHHhcCEEEECC---C-HhHHHHHHHhCC-------------------CEEEeecCCCCCCcHHHhHHHHHhCCCEEE
Confidence 99999999999876 3 578999999974 667664433 1 2334 23889
Q ss_pred ECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCH
Q 003999 494 VNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDV 533 (780)
Q Consensus 494 VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~ 533 (780)
++|. |.++++++|.+++..+ +.++...++.++++..+..
T Consensus 304 v~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~ 344 (350)
T cd03785 304 IPQEELTPERLAAALLELLSDP-ERLKAMAEAARSLARPDAA 344 (350)
T ss_pred EecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHhcCCCCHH
Confidence 9987 8999999999999754 3445445556777665543
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.4e-09 Score=117.88 Aligned_cols=251 Identities=16% Similarity=0.142 Sum_probs=147.8
Q ss_pred HHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhh--cCCEEEeecH
Q 003999 186 IFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIGFHTF 263 (780)
Q Consensus 186 ~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~Dligf~t~ 263 (780)
.|++ +.+..+| |+|++|......+...+-.+..++|+++.-+-. -+.+.+. |+.+++.+-+. .||++--.+.
T Consensus 77 ~l~~-~l~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s~ 150 (365)
T TIGR00236 77 GLEE-LLLEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-RTGDRYS--PMPEEINRQLTGHIADLHFAPTE 150 (365)
T ss_pred HHHH-HHHHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-CcCCCCC--CCccHHHHHHHHHHHHhccCCCH
Confidence 4443 3445566 999999644444433333334578887542211 1111111 22333333322 2677777777
Q ss_pred HHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcC-CCeEEEE-ec
Q 003999 264 DYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFD-GKKLILG-ID 341 (780)
Q Consensus 264 ~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~-~~~vil~-Vd 341 (780)
...+++++ +|.+ ..+|.++++|+....+..... .....+++++. ++.+++. ..
T Consensus 151 ~~~~~l~~-----~G~~---------------~~~I~vign~~~d~~~~~~~~-----~~~~~~~~~~~~~~~~vl~~~h 205 (365)
T TIGR00236 151 QAKDNLLR-----ENVK---------------ADSIFVTGNTVIDALLTNVEI-----AYSSPVLSEFGEDKRYILLTLH 205 (365)
T ss_pred HHHHHHHH-----cCCC---------------cccEEEeCChHHHHHHHHHhh-----ccchhHHHhcCCCCCEEEEecC
Confidence 77777653 2321 336788898863222221110 01234555563 3344454 44
Q ss_pred ccc-ccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCC
Q 003999 342 DMD-IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420 (780)
Q Consensus 342 rld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~ 420 (780)
|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+.++ . ...|+++ ++++
T Consensus 206 r~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~~----~--~~~v~~~-~~~~ 264 (365)
T TIGR00236 206 RRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHLG----D--SKRVHLI-EPLE 264 (365)
T ss_pred chhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHhC----C--CCCEEEE-CCCC
Confidence 543 45999999999999988888875 55554332 11 1111 222221 1 1246655 5788
Q ss_pred HHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc-CCCCccccC-CC-cEEECCC
Q 003999 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-EFIGCSPSL-SG-AIRVNPW 497 (780)
Q Consensus 421 ~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l-~~-al~VnP~ 497 (780)
..++..+|+.||+++.+| |.+..|||+|+. |+|.+ ..+|..+.+ .+ ++++ |.
T Consensus 265 ~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g~-------------------PvI~~~~~~~~~e~~~~g~~~lv-~~ 319 (365)
T TIGR00236 265 YLDFLNLAANSHLILTDS-----GGVQEEAPSLGK-------------------PVLVLRDTTERPETVEAGTNKLV-GT 319 (365)
T ss_pred hHHHHHHHHhCCEEEECC-----hhHHHHHHHcCC-------------------CEEECCCCCCChHHHhcCceEEe-CC
Confidence 899999999999999888 456799999974 67775 555555444 33 5566 57
Q ss_pred CHHHHHHHHHHHHcCC
Q 003999 498 DIDAVADAMTLAINMR 513 (780)
Q Consensus 498 d~~~~A~ai~~aL~m~ 513 (780)
|+++++++|.++++.+
T Consensus 320 d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 320 DKENITKAAKRLLTDP 335 (365)
T ss_pred CHHHHHHHHHHHHhCh
Confidence 9999999999999865
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.9e-09 Score=116.01 Aligned_cols=180 Identities=13% Similarity=0.100 Sum_probs=113.9
Q ss_pred EEeecCCCchhhhhhcCCchhHHHHHHHHHHc-CCCeEEEEeccccccCChHHHH-HHHHHHHHhCCCCCCceEEEEEEc
Q 003999 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDIFKGISLKL-LAMEQLLQQHPGMRGKVVLVQIVN 377 (780)
Q Consensus 300 ~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~~~~vil~Vdrld~~KGi~~~l-~A~~~ll~~~P~~~~~vvLvqi~~ 377 (780)
.++|+|+|...+... .. ..++ .+ +++++|++++|....|++...+ .|++++.+. +++ ++.+++
T Consensus 153 ~~i~n~v~~~~~~~~----~~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP----VP---RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc----ch---hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC
Confidence 578999987654321 00 1111 12 4678899999988889876644 788776542 332 333442
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCC
Q 003999 378 PARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGT 457 (780)
Q Consensus 378 p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~ 457 (780)
+++. + ++++.+++.+ ...++.+. ..++..+|+.||++|.+| | +.+.+|||+|+.
T Consensus 218 ----~~~~-~----~l~~~~~~~~-------l~~~v~~~----~~~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g~-- 271 (348)
T TIGR01133 218 ----KNDL-E----KVKNVYQELG-------IEAIVTFI----DENMAAAYAAADLVISRA---G-ASTVAELAAAGV-- 271 (348)
T ss_pred ----cchH-H----HHHHHHhhCC-------ceEEecCc----ccCHHHHHHhCCEEEECC---C-hhHHHHHHHcCC--
Confidence 2221 2 3333333322 11233332 227899999999999865 4 689999999974
Q ss_pred CccccccccCCCCCCCceEEEcCCCCcc-------ccC---CCcEEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHh
Q 003999 458 PIMDEALGRERDSPHTSMLVVSEFIGCS-------PSL---SGAIRVNPWD--IDAVADAMTLAINMRDSEKQLRHEKHY 525 (780)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~-------~~l---~~al~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~ 525 (780)
|+|++.+.|.. +.+ ..|++++|.| +++++++|.++++.+ +.++.+.+..+
T Consensus 272 -----------------Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~ 333 (348)
T TIGR01133 272 -----------------PAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDP-ANLEAMAEAAR 333 (348)
T ss_pred -----------------CEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCH-HHHHHHHHHHH
Confidence 77777665422 234 2488999876 999999999999764 34555566678
Q ss_pred hHhhhCCHHHHHH
Q 003999 526 RYVSTHDVAYWAR 538 (780)
Q Consensus 526 ~~V~~~~~~~Wa~ 538 (780)
+++..+...++++
T Consensus 334 ~~~~~~~~~~i~~ 346 (348)
T TIGR01133 334 KLAKPDAAKRIAE 346 (348)
T ss_pred hcCCccHHHHHHh
Confidence 8887776666554
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.10 E-value=7.3e-09 Score=114.64 Aligned_cols=250 Identities=15% Similarity=0.015 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeC--CCCChhHhhcCCChHHHHHh--hhcCCEEE
Q 003999 184 NKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHS--PFPSSEIYRTLPVRDEILRG--LLNCDLIG 259 (780)
Q Consensus 184 N~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~--PfP~~e~~~~lp~r~eil~~--ll~~Dlig 259 (780)
...+.+.+.+. +| |+|++|++....++..+..+..++|+.++.|- .|- +..|+. ..+. .-.+|.+-
T Consensus 77 ~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~-----~~~~~~--~~r~~~~~~ad~~~ 146 (363)
T cd03786 77 LIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD-----RGMPDE--ENRHAIDKLSDLHF 146 (363)
T ss_pred HHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC-----CCCCch--HHHHHHHHHhhhcc
Confidence 33444444443 67 89999987766665555555557888865542 110 001211 1111 11356655
Q ss_pred eecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCC-CchhhhhhcCCchhHHHHHHHHHHc--C-CCe
Q 003999 260 FHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGV-HMGRLESVLNLPATATKIKEIEKQF--D-GKK 335 (780)
Q Consensus 260 f~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GI-d~~~~~~~~~~~~~~~~~~~lr~~~--~-~~~ 335 (780)
..+....+++.+ .|. ...+|.++++++ |...+..... + ....++.+ + ++.
T Consensus 147 ~~s~~~~~~l~~-----~G~---------------~~~kI~vign~v~d~~~~~~~~~-~-----~~~~~~~~~~~~~~~ 200 (363)
T cd03786 147 APTEEARRNLLQ-----EGE---------------PPERIFVVGNTMIDALLRLLELA-K-----KELILELLGLLPKKY 200 (363)
T ss_pred CCCHHHHHHHHH-----cCC---------------CcccEEEECchHHHHHHHHHHhh-c-----cchhhhhcccCCCCE
Confidence 555544444432 122 234577777774 5433321110 0 01112223 2 345
Q ss_pred EEEEeccccc---cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 003999 336 LILGIDDMDI---FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (780)
Q Consensus 336 vil~Vdrld~---~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV 412 (780)
+++.++|+.. .||+..+++|++++.+. + +.++..+. ++... ++++.+.+.+.. . ..|
T Consensus 201 vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~----~~vi~~~~-----~~~~~----~l~~~~~~~~~~--~---~~v 260 (363)
T cd03786 201 ILVTLHRVENVDDGEQLEEILEALAELAEE--D----VPVVFPNH-----PRTRP----RIREAGLEFLGH--H---PNV 260 (363)
T ss_pred EEEEeCCccccCChHHHHHHHHHHHHHHhc--C----CEEEEECC-----CChHH----HHHHHHHhhccC--C---CCE
Confidence 7778999875 79999999999987542 2 33543332 12222 333344333210 0 136
Q ss_pred EEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-CCc
Q 003999 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGA 491 (780)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~a 491 (780)
.++ +....+++..+|+.||++|.+|- | +..|+++|+. |+|++...+..+++ ..|
T Consensus 261 ~~~-~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~-------------------PvI~~~~~~~~~~~~~~g 315 (363)
T cd03786 261 LLI-SPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLGV-------------------PVLNLRDRTERPETVESG 315 (363)
T ss_pred EEE-CCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCC-------------------CEEeeCCCCccchhhhee
Confidence 544 45677899999999999999984 4 4689999964 67777655544444 444
Q ss_pred EEECC-CCHHHHHHHHHHHHcCCH
Q 003999 492 IRVNP-WDIDAVADAMTLAINMRD 514 (780)
Q Consensus 492 l~VnP-~d~~~~A~ai~~aL~m~~ 514 (780)
+-+.+ .|+++++++|.++++.+.
T Consensus 316 ~~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 316 TNVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred eEEecCCCHHHHHHHHHHHhcCch
Confidence 43333 479999999999998764
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.1e-08 Score=114.94 Aligned_cols=271 Identities=10% Similarity=0.077 Sum_probs=154.3
Q ss_pred HHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHH
Q 003999 188 ADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYAR 267 (780)
Q Consensus 188 A~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~ 267 (780)
..++++..+| |+|.++ +....+..+.+++..++|+.. .++-+-.... | + --.+|.+-..+....+
T Consensus 96 l~~~l~~~kP--DvVi~~-~p~~~~~~l~~~~~~~iP~~~-v~td~~~~~~-----w----~--~~~~d~~~v~s~~~~~ 160 (391)
T PRK13608 96 LINLLIKEKP--DLILLT-FPTPVMSVLTEQFNINIPVAT-VMTDYRLHKN-----W----I--TPYSTRYYVATKETKQ 160 (391)
T ss_pred HHHHHHHhCc--CEEEEC-CcHHHHHHHHHhcCCCCCEEE-EeCCCCcccc-----c----c--cCCCCEEEECCHHHHH
Confidence 3445556677 888875 222233333333344677743 3443311000 1 1 1247887777765444
Q ss_pred HHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCC-eEEEEeccc
Q 003999 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGK-KLILGIDDM 343 (780)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~-~vil~Vdrl 343 (780)
.+.+ .|+. ..+|.+.++.|+. .|.... + ..++++++ +++ .+++.+|++
T Consensus 161 ~l~~-----~gi~---------------~~ki~v~GiPv~~-~f~~~~---~----~~~~~~~~~l~~~~~~ilv~~G~l 212 (391)
T PRK13608 161 DFID-----VGID---------------PSTVKVTGIPIDN-KFETPI---D----QKQWLIDNNLDPDKQTILMSAGAF 212 (391)
T ss_pred HHHH-----cCCC---------------HHHEEEECeecCh-Hhcccc---c----HHHHHHHcCCCCCCCEEEEECCCc
Confidence 4432 1221 1234444555553 333211 1 12344555 244 456779999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHH
Q 003999 344 DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFE 423 (780)
Q Consensus 344 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~e 423 (780)
...||+..+++++ ++..|+++ ++.+++ .++ ++.+++.+. .+. . ..|+++ |.+ ++
T Consensus 213 g~~k~~~~li~~~---~~~~~~~~----~vvv~G----~~~---~l~~~l~~~---~~~----~--~~v~~~-G~~--~~ 266 (391)
T PRK13608 213 GVSKGFDTMITDI---LAKSANAQ----VVMICG----KSK---ELKRSLTAK---FKS----N--ENVLIL-GYT--KH 266 (391)
T ss_pred ccchhHHHHHHHH---HhcCCCce----EEEEcC----CCH---HHHHHHHHH---hcc----C--CCeEEE-ecc--ch
Confidence 9999999999885 34456654 655552 222 122223222 221 1 135544 454 57
Q ss_pred HHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC------CCcEEECCC
Q 003999 424 KSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL------SGAIRVNPW 497 (780)
Q Consensus 424 l~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l------~~al~VnP~ 497 (780)
+..+|+.||++|.. +.|++..|||+||. |+|++...+..+.. ..|.-+-+.
T Consensus 267 ~~~~~~~aDl~I~k----~gg~tl~EA~a~G~-------------------PvI~~~~~pgqe~~N~~~~~~~G~g~~~~ 323 (391)
T PRK13608 267 MNEWMASSQLMITK----PGGITISEGLARCI-------------------PMIFLNPAPGQELENALYFEEKGFGKIAD 323 (391)
T ss_pred HHHHHHhhhEEEeC----CchHHHHHHHHhCC-------------------CEEECCCCCCcchhHHHHHHhCCcEEEeC
Confidence 99999999999863 45889999999974 77776433222211 222223356
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHHHHhh
Q 003999 498 DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDH 551 (780)
Q Consensus 498 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~~~~~ 551 (780)
|.++++++|.+++++++ .+..+.++.+++...++...-++.+++.+...++.+
T Consensus 324 ~~~~l~~~i~~ll~~~~-~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 324 TPEEAIKIVASLTNGNE-QLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CHHHHHHHHHHHhcCHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 99999999999998653 455555667777778888888888887776655543
|
|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.7e-08 Score=114.69 Aligned_cols=182 Identities=12% Similarity=0.078 Sum_probs=120.9
Q ss_pred CCCeEEEEeccccccCChHHHHHHHHHHHH--hCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 003999 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQ--QHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~ 409 (780)
++..++..|.|+...||..+.+.+++++++ .+|+. .+.+|..|.....+. .-.++.+.+.+++++ ..|. +
T Consensus 387 pd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~-~gk~~i~~i~~la~~--~~~~--~- 458 (601)
T TIGR02094 387 PDVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADG-EGKEIIQRIVEFSKR--PEFR--G- 458 (601)
T ss_pred CCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccc-hHHHHHHHHHHHHhc--ccCC--C-
Confidence 356688899999999999999999999985 56652 366776665432221 113445555665542 0122 1
Q ss_pred ccEEEecCCCCHHHHHHHHHhcceeee-ccC-CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcccc
Q 003999 410 EPVVLIDRPVPRFEKSAYYAVAECCIV-NAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS 487 (780)
Q Consensus 410 ~pV~~~~~~v~~~el~aly~~ADv~vv-tS~-rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (780)
.|+++.+ .+..--..+|+.||+++. ||. .|..|+.-+-||.- |.|..|-.-|...+
T Consensus 459 -kv~f~~~-Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n--------------------GgL~~sv~DG~~~E 516 (601)
T TIGR02094 459 -RIVFLEN-YDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN--------------------GVLNLSILDGWWGE 516 (601)
T ss_pred -CEEEEcC-CCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc--------------------CCceeecccCcccc
Confidence 4777663 455555678999999999 777 89999998888873 45666666666544
Q ss_pred C---CCcEEECC------------CCHHHHHHHHHHHH-----cCCH----HHHHHHHHH-HhhHhhhCCHHHHHHHHHH
Q 003999 488 L---SGAIRVNP------------WDIDAVADAMTLAI-----NMRD----SEKQLRHEK-HYRYVSTHDVAYWARSFAQ 542 (780)
Q Consensus 488 l---~~al~VnP------------~d~~~~A~ai~~aL-----~m~~----~er~~r~~~-~~~~V~~~~~~~Wa~~~l~ 542 (780)
. .+|..+.+ .|.+++-++|.+++ +.++ .+...++++ |......+++.+-++.+.+
T Consensus 517 ~~~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~ 596 (601)
T TIGR02094 517 GYDGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVD 596 (601)
T ss_pred cCCCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHH
Confidence 3 24788885 89999999998877 2211 122333333 4444446888888887765
Q ss_pred H
Q 003999 543 D 543 (780)
Q Consensus 543 ~ 543 (780)
.
T Consensus 597 ~ 597 (601)
T TIGR02094 597 K 597 (601)
T ss_pred H
Confidence 4
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.8e-08 Score=98.66 Aligned_cols=166 Identities=17% Similarity=0.147 Sum_probs=104.1
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC--CCceEEecCccEEeeCCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC--EMLGIAAEHGYFIRWNKT 667 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l--~~lgliaenG~~ir~~~~ 667 (780)
..++||+|+||||++++ ....|. ...|.+|.+ .|..|+.+|..++..+..+-..+ +...+|||||+.|+.+.+
T Consensus 6 ~~~lIFtDlD~TLl~~~-ye~~pA---~pv~~el~d-~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~~ 80 (274)
T COG3769 6 MPLLIFTDLDGTLLPHS-YEWQPA---APVLLELKD-AGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPKG 80 (274)
T ss_pred cceEEEEcccCcccCCC-CCCCcc---chHHHHHHH-cCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEeccc
Confidence 46899999999999943 455554 445556666 59999999999999988777654 457899999999998753
Q ss_pred CceEecCC---------CcChh-HHHHHHHHHHHHHhcCCCceeec----------------------ccceEEEeeccC
Q 003999 668 SEWETNHL---------GADLE-WKKIVEPVMRSYTEATDGSNIEI----------------------KESALVWHHQDA 715 (780)
Q Consensus 668 ~~w~~~~~---------~~d~~-wk~~v~~i~~~~~e~t~gs~iE~----------------------k~~~l~~hyr~a 715 (780)
|..... ..... -.+.+++.++.+.+..--.+..+ .+.+.+...+..
T Consensus 81 --~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs~ 158 (274)
T COG3769 81 --WFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRSS 158 (274)
T ss_pred --ccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeeccc
Confidence 442110 00100 11233333333332211111110 011111111111
Q ss_pred CCCcccccHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCC
Q 003999 716 DPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCV 771 (780)
Q Consensus 716 d~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i 771 (780)
.+....+...|...+++++.|..+..|......||.|++++++.+-.
T Consensus 159 ---------d~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~r 205 (274)
T COG3769 159 ---------DERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRR 205 (274)
T ss_pred ---------chHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHh
Confidence 23344556666677899999999999999999999999999986543
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=98.87 E-value=7.2e-09 Score=97.85 Aligned_cols=128 Identities=21% Similarity=0.226 Sum_probs=89.0
Q ss_pred CeEEEEeccccccCChHHHHH-HHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 003999 334 KKLILGIDDMDIFKGISLKLL-AMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (780)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~-A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV 412 (780)
..++++.|++.+.||+..+++ |++++.+++|+++ |+.+|. +++ ++.++ +. ..|
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~-----~~~------~l~~~----~~-------~~v 55 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGN-----GPD------ELKRL----RR-------PNV 55 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECE-----SS-------HHCCH----HH-------CTE
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeC-----CHH------HHHHh----cC-------CCE
Confidence 467899999999999999999 9999999999755 877774 222 12222 11 136
Q ss_pred EEecCCCCHHHHHHHHHhcceeeeccC-CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC--
Q 003999 413 VLIDRPVPRFEKSAYYAVAECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-- 489 (780)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~-rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-- 489 (780)
.+. +.+ +|+.++|+.||+++.|+. .+|++...+|||++| .|+|+|.. |+...+.
T Consensus 56 ~~~-g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G-------------------~pvi~~~~-~~~~~~~~~ 112 (135)
T PF13692_consen 56 RFH-GFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAG-------------------KPVIASDN-GAEGIVEED 112 (135)
T ss_dssp EEE--S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT---------------------EEEEHH-HCHCHS---
T ss_pred EEc-CCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhC-------------------CCEEECCc-chhhheeec
Confidence 655 456 689999999999999985 789999999999997 47888887 5555552
Q ss_pred -CcEEECCCCHHHHHHHHHHHHc
Q 003999 490 -GAIRVNPWDIDAVADAMTLAIN 511 (780)
Q Consensus 490 -~al~VnP~d~~~~A~ai~~aL~ 511 (780)
.++.+ +.|+++++++|.+++.
T Consensus 113 ~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 113 GCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp SEEEE--TT-HHHHHHHHHHHHH
T ss_pred CCeEEE-CCCHHHHHHHHHHHhc
Confidence 36666 8899999999999885
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.3e-07 Score=105.61 Aligned_cols=141 Identities=17% Similarity=0.176 Sum_probs=92.2
Q ss_pred HHHHHcC---CCeEE-EE-eccccccC-ChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHH
Q 003999 326 EIEKQFD---GKKLI-LG-IDDMDIFK-GISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKR 399 (780)
Q Consensus 326 ~lr~~~~---~~~vi-l~-Vdrld~~K-Gi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~ 399 (780)
.+++++. ++++| +. -.|....| ++...++|++.+.+++|+++ +++++. .++..+ ++++++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~~~----~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKRRE----QIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----ChhhHH----HHHHHHhh
Confidence 3455552 45543 33 34666654 47888999999988888765 665542 122222 33333322
Q ss_pred HhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc
Q 003999 400 INEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479 (780)
Q Consensus 400 In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S 479 (780)
.. | . .+.++. .++..+|+.||+++.+| |.+.+|+|+||. |+|++
T Consensus 243 ~~---~---~-~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~-------------------PvI~~ 286 (380)
T PRK00025 243 YA---G---L-EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLKV-------------------PMVVG 286 (380)
T ss_pred cC---C---C-CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCC-------------------CEEEE
Confidence 10 1 1 244443 37899999999999998 778889999974 66665
Q ss_pred -----------------CCCCccccCCC-----cEEECCCCHHHHHHHHHHHHcCCH
Q 003999 480 -----------------EFIGCSPSLSG-----AIRVNPWDIDAVADAMTLAINMRD 514 (780)
Q Consensus 480 -----------------e~~G~~~~l~~-----al~VnP~d~~~~A~ai~~aL~m~~ 514 (780)
.+.|.++.+.+ +++++..|++++++++.++|++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~ 343 (380)
T PRK00025 287 YKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGA 343 (380)
T ss_pred EccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHH
Confidence 44454555532 367788899999999999998764
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.3e-06 Score=99.68 Aligned_cols=344 Identities=16% Similarity=0.216 Sum_probs=162.1
Q ss_pred cccccccccccCCCCCCCCCccCHHhHHH--HHHHHHHHHHHHHHHcCCC-CCEEEEeCCccchHHHHHHHhcCCCcEEE
Q 003999 151 KQHLWPLFHYMLPMCPDHGDRFDRVLWQA--YVSANKIFADKVMEVINPD-DDCVWVHDYHLMVLPTFLRKRFNRIKLGF 227 (780)
Q Consensus 151 ~~~LWpl~H~~~~~~~~~~~~f~~~~w~~--Y~~vN~~fA~~v~~~~~~~-~DiVwvhDyhl~llp~~lr~~~~~~~i~~ 227 (780)
+.-||-.|+--.+. .+.++.++ +--+...|-+.+.+..... .=+.+.|.|..-+-.-++|++.|++.-+|
T Consensus 100 k~~lW~~~gIdS~~-------~~~dynea~~Fgyava~fi~~f~~~~~~~~~ViaHfHEWmaG~gll~lr~~~~~VaTvF 172 (633)
T PF05693_consen 100 KGELWELFGIDSPH-------GDGDYNEAVMFGYAVAWFIEEFYKFYEEKPKVIAHFHEWMAGVGLLYLRKRKPDVATVF 172 (633)
T ss_dssp HHHHHHHH-----T-------T-HHHHHHHHHHHHHHHHHHHHHHH-S-SEEEEEEEESGGGTTHHHHHHHTT-SCEEEE
T ss_pred HHHHHHHcCCCCCC-------CCcchhHHHHHHHHHHHHHHHHHHhhcCCCcEEEEechHhHhHHHHHHhccCCCeeEEE
Confidence 45688888764332 22222221 1112233333333333311 12567788877666678999999999999
Q ss_pred EEeCCCC-------ChhHhhcCCC---hH-----------HHHHh-hhcCCEEEeecHHHHHHHHHHHHhhhCceeccCC
Q 003999 228 FLHSPFP-------SSEIYRTLPV---RD-----------EILRG-LLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKR 285 (780)
Q Consensus 228 flH~PfP-------~~e~~~~lp~---r~-----------eil~~-ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~ 285 (780)
+.|---+ +.++|..|+. .+ -|-++ -..||..-..+.--+ .-|..+|+
T Consensus 173 TTHAT~lGR~l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~AdvFTTVSeITa----~Ea~~LL~------- 241 (633)
T PF05693_consen 173 TTHATLLGRYLAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHYADVFTTVSEITA----KEAEHLLK------- 241 (633)
T ss_dssp EESS-HHHHHHTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHHSSEEEESSHHHH----HHHHHHHS-------
T ss_pred EecccchhhHhhcCCCcHHHHhhccCccccccCccchHHHHHHHHHHHhcCeeeehhhhHH----HHHHHHhC-------
Confidence 9996543 2234444441 11 11111 223444332222110 01222222
Q ss_pred ceeEEEEcCeEEEEEEeecCCCchhhhhhcC----CchhHHHHHHH-HHHc-------CCCeEEEE-ecccc-ccCChHH
Q 003999 286 GHIGLDYFGRTVYIKILPVGVHMGRLESVLN----LPATATKIKEI-EKQF-------DGKKLILG-IDDMD-IFKGISL 351 (780)
Q Consensus 286 g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~----~~~~~~~~~~l-r~~~-------~~~~vil~-Vdrld-~~KGi~~ 351 (780)
|..- -|.|+|+|.+.|...-. ....++++.++ +..| .+++++++ .||.+ ..||++.
T Consensus 242 ---------r~pD-vV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~ 311 (633)
T PF05693_consen 242 ---------RKPD-VVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDV 311 (633)
T ss_dssp ---------S--S-EE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHH
T ss_pred ---------CCCC-EEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccH
Confidence 2211 35799999988765311 01123344443 3333 24565555 89999 5799999
Q ss_pred HHHHHHHHH---HhCCCCCCceEEEEEEcCCCCChhH---------HHHHHHHHHHHHHHHhhc-c-----CC-------
Q 003999 352 KLLAMEQLL---QQHPGMRGKVVLVQIVNPARGSGKD---------VQEAKKETYLTAKRINEV-Y-----GS------- 406 (780)
Q Consensus 352 ~l~A~~~ll---~~~P~~~~~vvLvqi~~p~r~~~~~---------~~~l~~ei~~lv~~In~~-~-----g~------- 406 (780)
.|+|+.+|- +... ..-.||.. |-.|+....-. +.++++.+.++.++|..+ | |.
T Consensus 312 fieAL~rLn~~lk~~~-~~~tVVaF-ii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~ 389 (633)
T PF05693_consen 312 FIEALARLNHRLKQAG-SDKTVVAF-IIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNEL 389 (633)
T ss_dssp HHHHHHHHHHHHHHTT--S-EEEEE-EE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHC
T ss_pred HHHHHHHHHHHHhhcC-CCCeEEEE-EEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHh
Confidence 999998873 2221 11224433 34466543211 122333333333333111 0 11
Q ss_pred --------------------------------------------------CCcccEEEecCCCC------HHHHHHHHHh
Q 003999 407 --------------------------------------------------PNYEPVVLIDRPVP------RFEKSAYYAV 430 (780)
Q Consensus 407 --------------------------------------------------~~~~pV~~~~~~v~------~~el~aly~~ 430 (780)
.+-..|+|....++ .-++..+.+.
T Consensus 390 ~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~G 469 (633)
T PF05693_consen 390 LDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRG 469 (633)
T ss_dssp S-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHH
T ss_pred cChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhcc
Confidence 01124665543332 3467889999
Q ss_pred cceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC--------CCcE-EECCC--C-
Q 003999 431 AECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL--------SGAI-RVNPW--D- 498 (780)
Q Consensus 431 ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--------~~al-~VnP~--d- 498 (780)
+|++|+||.+|++|.+|+|++|.+ .|-|.|..+|...-+ ..|+ +|+-. |
T Consensus 470 cdLgvFPSYYEPWGYTPlE~~a~g-------------------VPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~ 530 (633)
T PF05693_consen 470 CDLGVFPSYYEPWGYTPLECTAFG-------------------VPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNY 530 (633)
T ss_dssp SSEEEE--SSBSS-HHHHHHHHTT---------------------EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-H
T ss_pred CceeeeccccccccCChHHHhhcC-------------------CceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCH
Confidence 999999999999999999999986 588999999865222 1244 44432 2
Q ss_pred ---HHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHH
Q 003999 499 ---IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQD 543 (780)
Q Consensus 499 ---~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~ 543 (780)
++++|+.|.+...++..+|.....+..+.-..-+|.+-..-+.+.
T Consensus 531 ~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~A 578 (633)
T PF05693_consen 531 DESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKA 578 (633)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 467777788888888776665444443333345665555544444
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=5e-07 Score=99.45 Aligned_cols=239 Identities=13% Similarity=0.059 Sum_probs=135.7
Q ss_pred HHHHcCCCCCEEEEeCCccch--HHH-HHHH-hcCCCcEEEEEeCCCCChhHhhcCC-ChHHHHHhhhcCCEEEeecHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLMV--LPT-FLRK-RFNRIKLGFFLHSPFPSSEIYRTLP-VRDEILRGLLNCDLIGFHTFDY 265 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~l--lp~-~lr~-~~~~~~i~~flH~PfP~~e~~~~lp-~r~eil~~ll~~Dligf~t~~y 265 (780)
+...+++ +|+|++|..-+.. ++. ++++ +..++|+++++|--+|.. +.... ........+-.||.|..++...
T Consensus 58 ~~~~~~~-~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~--~~~~~~~~~~~~~~~~~aD~iI~~S~~~ 134 (333)
T PRK09814 58 ILASLKP-GDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLR--FDSNYYLMKEEIDMLNLADVLIVHSKKM 134 (333)
T ss_pred HHhcCCC-CCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHh--ccccchhhHHHHHHHHhCCEEEECCHHH
Confidence 4445666 4999999754331 222 2222 112699999999877632 11111 1222233445689999999876
Q ss_pred HHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccc
Q 003999 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDI 345 (780)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~ 345 (780)
.+.+.+ .|+. ..++.++|+..+..... .+....+++.|+++||+..
T Consensus 135 ~~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~--------------~~~~~~~~~~i~yaG~l~k 180 (333)
T PRK09814 135 KDRLVE-----EGLT---------------TDKIIVQGIFDYLNDIE--------------LVKTPSFQKKINFAGNLEK 180 (333)
T ss_pred HHHHHH-----cCCC---------------cCceEeccccccccccc--------------ccccccCCceEEEecChhh
Confidence 555532 1221 11233334332221100 0011234568999999994
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
..++ .+..|+++ |+++|. |++.. . . ...|+| .|.++.+|+.
T Consensus 181 ~~~l----------~~~~~~~~----l~i~G~-----g~~~~-----------~-----~---~~~V~f-~G~~~~eel~ 221 (333)
T PRK09814 181 SPFL----------KNWSQGIK----LTVFGP-----NPEDL-----------E-----N---SANISY-KGWFDPEELP 221 (333)
T ss_pred chHH----------HhcCCCCe----EEEECC-----Ccccc-----------c-----c---CCCeEE-ecCCCHHHHH
Confidence 3321 11345544 776663 22211 0 0 113664 4689999999
Q ss_pred HHHHhcceeeeccCC-----------cCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---Cc
Q 003999 426 AYYAVAECCIVNAVR-----------DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GA 491 (780)
Q Consensus 426 aly~~ADv~vvtS~r-----------EGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~a 491 (780)
++|+. |+.+++.-. -.++--..|||||| .|+|++..++.++.+. .|
T Consensus 222 ~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G-------------------~PVI~~~~~~~~~~V~~~~~G 281 (333)
T PRK09814 222 NELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAG-------------------LPVIVWSKAAIADFIVENGLG 281 (333)
T ss_pred HHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCC-------------------CCEEECCCccHHHHHHhCCce
Confidence 99998 666654321 23344478899997 4899999988888882 38
Q ss_pred EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 492 IRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 492 l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
+.|+ +.++++++|.++ ++++++++.++.++....
T Consensus 282 ~~v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~~~ 315 (333)
T PRK09814 282 FVVD--SLEELPEIIDNI---TEEEYQEMVENVKKISKL 315 (333)
T ss_pred EEeC--CHHHHHHHHHhc---CHHHHHHHHHHHHHHHHH
Confidence 8888 788999999873 344554444445554443
|
|
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.9e-07 Score=96.25 Aligned_cols=182 Identities=12% Similarity=0.142 Sum_probs=131.3
Q ss_pred CCeEEEEeccccccCChHHHHHHHHHHHHhCCC--CCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 003999 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPG--MRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~--~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~ 410 (780)
....+|+++.+.|.|+.. .|+-+...+.++|. .-.++.|+++| ..|+ ++-++.-+.+++++++++.. +
T Consensus 268 r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivG-ScRn--eeD~ervk~Lkd~a~~L~i~-~----- 337 (465)
T KOG1387|consen 268 RENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVG-SCRN--EEDEERVKSLKDLAEELKIP-K----- 337 (465)
T ss_pred cceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEe-ccCC--hhhHHHHHHHHHHHHhcCCc-c-----
Confidence 457899999999999999 67777777888887 33457787666 4554 33345556678888877643 1
Q ss_pred cEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc-ccC-
Q 003999 411 PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS-PSL- 488 (780)
Q Consensus 411 pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~-~~l- 488 (780)
.|. +.-++|.+++..+|..|-+-|-+-..|-||+...||||+|. .+|+-.-+|.. +.+
T Consensus 338 ~v~-F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGl-------------------Ipi~h~SgGP~lDIV~ 397 (465)
T KOG1387|consen 338 HVQ-FEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGL-------------------IPIVHNSGGPLLDIVT 397 (465)
T ss_pred ceE-EEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCc-------------------eEEEeCCCCCceeeee
Confidence 355 44589999999999999999999999999999999999963 22222222211 111
Q ss_pred --C---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHH
Q 003999 489 --S---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (780)
Q Consensus 489 --~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~ 546 (780)
. .|++. | +.++-|+++.+++++..+||....+..+..+.++.-+..-+.|...+..
T Consensus 398 ~~~G~~tGFla-~-t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 398 PWDGETTGFLA-P-TDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred ccCCccceeec-C-ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 1 26665 2 6788899999999999988777666677778777766666665544433
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=98.67 E-value=2e-06 Score=99.80 Aligned_cols=255 Identities=15% Similarity=0.104 Sum_probs=162.1
Q ss_pred HHHHHHHHHHHHHHH----cCCCCCEEE--EeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCC--hHHHHHh
Q 003999 180 YVSANKIFADKVMEV----INPDDDCVW--VHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPV--RDEILRG 251 (780)
Q Consensus 180 Y~~vN~~fA~~v~~~----~~~~~DiVw--vhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~--r~eil~~ 251 (780)
|...+..++..+-+. .. ++|++. .+.-|... +....|..++.+..|+ -+. |. -+..+..
T Consensus 203 f~~~~eLi~efl~~l~~~~~~-~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~-~~~-------~~~~y~~~l~~ 269 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVK-DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS-ERN-------RHHTYLDLYES 269 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCC-CCCEEEEEcCchhhhh----HhhcCccceEEEEecc-Ccc-------cccchhhhhhC
Confidence 444455555544433 33 457777 66666655 4444454445556665 211 22 2456666
Q ss_pred hhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc
Q 003999 252 LLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF 331 (780)
Q Consensus 252 ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~ 331 (780)
+-.+|.+..-|.+-.+..... ++- .. ...+|..+|++.= +... ...++.
T Consensus 270 ~~~~d~iIv~T~~q~~~l~~~----~~~------------~~-~~~~v~~Ip~~~~--~~~~------------~~s~r~ 318 (519)
T TIGR03713 270 LSRADLIIVDREDIERLLEEN----YRE------------NY-VEFDISRITPFDT--RLRL------------GQSQQL 318 (519)
T ss_pred hhhcCeEEEcCHHHHHHHHHH----hhh------------cc-cCCcceeeCccce--EEec------------Chhhcc
Confidence 777887776675433333211 110 00 1123444565533 1110 012334
Q ss_pred CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCC-c-
Q 003999 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN-Y- 409 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~-~- 409 (780)
+++.|.+++||+ +.|-+...|+|+.++++++|+.. |...|... . .+..+.++++++++|..++... +
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~~---~---~~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYNN---D---NDITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEecC---c---hhHHHHHHHHHHHHHhhhchhhhcc
Confidence 567788888899 99999999999999999999977 76666321 1 2335566777777766532210 0
Q ss_pred -----------------c---cEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCC
Q 003999 410 -----------------E---PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERD 469 (780)
Q Consensus 410 -----------------~---pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~ 469 (780)
. ..+.+.+..+..++.+.|.-|.++|.+|..|||+ ..+|||+.|.
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~Gi-------------- 452 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGI-------------- 452 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCC--------------
Confidence 0 1344666677779999999999999999999999 9999999863
Q ss_pred CCCCceEEEcCCCCccccC-C--CcEEECCCCHHHHHHHHHHHHcCCH
Q 003999 470 SPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDIDAVADAMTLAINMRD 514 (780)
Q Consensus 470 ~~~~g~lV~Se~~G~~~~l-~--~al~VnP~d~~~~A~ai~~aL~m~~ 514 (780)
|.| .-|.++.+ + +|.+| .|+.++++||...|+.+.
T Consensus 453 -----PqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~~~L~~~~ 490 (519)
T TIGR03713 453 -----PQI---NKVETDYVEHNKNGYII--DDISELLKALDYYLDNLK 490 (519)
T ss_pred -----Cee---ecCCceeeEcCCCcEEe--CCHHHHHHHHHHHHhCHH
Confidence 555 45666666 2 58999 699999999999999774
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=98.62 E-value=4e-06 Score=100.51 Aligned_cols=182 Identities=10% Similarity=0.021 Sum_probs=118.5
Q ss_pred CeEEEEeccccccCChHHHHHHHHHHHH--hCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 334 KKLILGIDDMDIFKGISLKLLAMEQLLQ--QHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~A~~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
..+|.++.|+...||..++|..++++++ .+|+ ..+.+|..|.....+ ..-+++.+++.++++. -+|. + .
T Consensus 478 ~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d-~~gK~iIk~i~~~a~~--p~~~--~--k 548 (778)
T cd04299 478 VLTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPAD-EPGKELIQEIVEFSRR--PEFR--G--R 548 (778)
T ss_pred ccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccc-hHHHHHHHHHHHHHhC--cCCC--C--c
Confidence 3478889999999999999999999865 3454 247777666433222 1113444455555431 0222 1 4
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccC--CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL- 488 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~--rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 488 (780)
|+|+.+ .+..--..+++.|||++.||. .|.-|+.-.-||.- |.|-+|..-|...+-
T Consensus 549 Vvfle~-Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~N--------------------G~LnlSvlDGww~E~~ 607 (778)
T cd04299 549 IVFLED-YDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALN--------------------GGLNLSVLDGWWDEGY 607 (778)
T ss_pred EEEEcC-CCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHc--------------------CCeeeecccCcccccc
Confidence 777764 455555678999999999999 78777777666652 678888888766554
Q ss_pred C--CcEEECC------------CCHHHHHHHHHHHHc----------CCHHHHHHHHHH-HhhHhhhCCHHHHHHHHHHH
Q 003999 489 S--GAIRVNP------------WDIDAVADAMTLAIN----------MRDSEKQLRHEK-HYRYVSTHDVAYWARSFAQD 543 (780)
Q Consensus 489 ~--~al~VnP------------~d~~~~A~ai~~aL~----------m~~~er~~r~~~-~~~~V~~~~~~~Wa~~~l~~ 543 (780)
. +|..+.+ .|.+++-+.|.+.+- .|. +...+++. +....-.+++.+-++.|++.
T Consensus 608 ~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~-~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~ 686 (778)
T cd04299 608 DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPP-GWVAMMKHSMATLGPRFSAERMVREYVER 686 (778)
T ss_pred CCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCH-HHHHHHHHHHHhcccCCCHHHHHHHHHHH
Confidence 3 4788877 555666666655443 132 33444444 44445568989999988888
Q ss_pred HHH
Q 003999 544 LER 546 (780)
Q Consensus 544 l~~ 546 (780)
+-.
T Consensus 687 ~Y~ 689 (778)
T cd04299 687 FYL 689 (778)
T ss_pred hHH
Confidence 763
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.56 E-value=5.5e-07 Score=88.14 Aligned_cols=179 Identities=18% Similarity=0.210 Sum_probs=122.8
Q ss_pred HHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc--CC-CceEEecCccE
Q 003999 585 AYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP--CE-MLGIAAEHGYF 661 (780)
Q Consensus 585 ~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~--l~-~lgliaenG~~ 661 (780)
++++-..-|+++|.||||++ .....++++.+.|++|++ ..++.+|-|-+.+.+.+.++. +. -.+..+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~lr~--~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKLRK--KVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHHhh--heEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 45555667999999999999 667899999999999886 689999999999999888854 11 24788999987
Q ss_pred EeeCCCCce-EecCCCc-ChhHHHHHHHHHHHHHh----cCCCceeecccceEEEee--ccCCC----Cccccc-----H
Q 003999 662 IRWNKTSEW-ETNHLGA-DLEWKKIVEPVMRSYTE----ATDGSNIEIKESALVWHH--QDADP----DFGSCQ-----A 724 (780)
Q Consensus 662 ir~~~~~~w-~~~~~~~-d~~wk~~v~~i~~~~~e----~t~gs~iE~k~~~l~~hy--r~ad~----d~~~~q-----a 724 (780)
-+..+...- +++.... +...++.+.-++.++.+ ...|.+||-++..+...- |+|.. +|.... -
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR 159 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIR 159 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhH
Confidence 776543210 1110000 11123333334455554 246899998887765542 34421 122111 1
Q ss_pred HHHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHH
Q 003999 725 KELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLS 768 (780)
Q Consensus 725 ~el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~ 768 (780)
+.+...|++.+++.+++. +.|+..+||-|.|++|-..++.|-+.
T Consensus 160 ~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d 204 (252)
T KOG3189|consen 160 EKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD 204 (252)
T ss_pred HHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc
Confidence 245678888888888885 56899999999999999999988765
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.42 E-value=4.1e-07 Score=89.08 Aligned_cols=71 Identities=11% Similarity=0.187 Sum_probs=56.7
Q ss_pred eEEeCCCCCCCCCCCC--------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHH---HHhcc-------CCCceE
Q 003999 593 AIFLDYDGTVVPETSI--------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS---EWLAP-------CEMLGI 654 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~--------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~---~~f~~-------l~~lgl 654 (780)
+|++|+||||+..... ....++.+.+++++|++. |+.|+++|||+..... +|+.. +|..++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~-G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~l 79 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN-GYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPV 79 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc-CCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceE
Confidence 5899999999983200 157789999999999995 9999999999988774 67755 444578
Q ss_pred EecCccEEee
Q 003999 655 AAEHGYFIRW 664 (780)
Q Consensus 655 iaenG~~ir~ 664 (780)
++.||+++..
T Consensus 80 i~~~g~~~~~ 89 (157)
T smart00775 80 LLSPDRLFAA 89 (157)
T ss_pred EEcCCcchhh
Confidence 9999998864
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.9e-05 Score=86.29 Aligned_cols=140 Identities=17% Similarity=0.131 Sum_probs=86.6
Q ss_pred HHHHc---CCCeEEE--Eeccccc-cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHH
Q 003999 327 IEKQF---DGKKLIL--GIDDMDI-FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRI 400 (780)
Q Consensus 327 lr~~~---~~~~vil--~Vdrld~-~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~I 400 (780)
.|+++ +++++|+ +.+|..+ .|+++..++|++.+.+++|+++ ++..+.+. ... ..++++.+..
T Consensus 181 ~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~----~~~~~~~~~~ 248 (385)
T TIGR00215 181 AREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRR----LQFEQIKAEY 248 (385)
T ss_pred HHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhH----HHHHHHHHHh
Confidence 34455 3555553 4569887 7999999999999999899876 54333221 111 1222332222
Q ss_pred hhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc-
Q 003999 401 NEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS- 479 (780)
Q Consensus 401 n~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S- 479 (780)
+. +. .|.++.+ +...+|++||++|.+| |.+.+|+|+||. |+|++
T Consensus 249 ----~~-~~-~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~-------------------P~Vv~y 293 (385)
T TIGR00215 249 ----GP-DL-QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKT-------------------PMVVGY 293 (385)
T ss_pred ----CC-CC-cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCC-------------------CEEEEE
Confidence 21 11 3554433 3457999999999999 667779999985 33443
Q ss_pred ----------------CCCCccccCC--Cc---EEECCCCHHHHHHHHHHHHcCC
Q 003999 480 ----------------EFIGCSPSLS--GA---IRVNPWDIDAVADAMTLAINMR 513 (780)
Q Consensus 480 ----------------e~~G~~~~l~--~a---l~VnP~d~~~~A~ai~~aL~m~ 513 (780)
.+.+.+..+. ++ ++-+-.+++.+++++.+.|+.+
T Consensus 294 k~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 294 RMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred cCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 1333333332 11 2223457899999999999887
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.32 E-value=0.00023 Score=78.50 Aligned_cols=302 Identities=18% Similarity=0.223 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCEEEEeCCc----cchHHHH--HHHhcCCCcEEEEEeCCC---------CChhHhhcCCCh
Q 003999 181 VSANKIFADKVMEVINPDDDCVWVHDYH----LMVLPTF--LRKRFNRIKLGFFLHSPF---------PSSEIYRTLPVR 245 (780)
Q Consensus 181 ~~vN~~fA~~v~~~~~~~~DiVwvhDyh----l~llp~~--lr~~~~~~~i~~flH~Pf---------P~~e~~~~lp~r 245 (780)
.+.+++|+ .......|++..||+|--- ..++|-. ||+++|+.++..+.=+|= +..-.-..+|..
T Consensus 32 ~r~~eRfg-~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFG-FYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhc-ccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 45667776 1123334567899999654 3344444 899999999998876652 222222234432
Q ss_pred H-HHHHhh---hcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEE---------------------EEE
Q 003999 246 D-EILRGL---LNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV---------------------YIK 300 (780)
Q Consensus 246 ~-eil~~l---l~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~---------------------~i~ 300 (780)
. -..+.. ...|+..|...+.=-|++..|.+. |+.. +-.++|-. ..-
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p~--------~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li 181 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIPL--------VLVNARLSDRSFARYAKLKFLARLLFKNIDLI 181 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCCE--------EEEeeeechhhhHHHHHHHHHHHHHHHhccee
Confidence 1 122222 235666666666666666655431 2110 11111100 000
Q ss_pred EeecCCCchhhhhh---------------cCCchhHHHHHHHHHHcCC-CeEEEEeccccccCChHHHHHHHHHHHHhCC
Q 003999 301 ILPVGVHMGRLESV---------------LNLPATATKIKEIEKQFDG-KKLILGIDDMDIFKGISLKLLAMEQLLQQHP 364 (780)
Q Consensus 301 i~P~GId~~~~~~~---------------~~~~~~~~~~~~lr~~~~~-~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P 364 (780)
+.-.-+|.++|... ...|........+|+++++ +++++..+. ...--...+.|+..+++++|
T Consensus 182 ~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaST--H~GEeei~l~~~~~l~~~~~ 259 (419)
T COG1519 182 LAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAAST--HEGEEEIILDAHQALKKQFP 259 (419)
T ss_pred eecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecC--CCchHHHHHHHHHHHHhhCC
Confidence 11111222222211 1123445566778888877 888888888 22333447889999999999
Q ss_pred CCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCC---C----CcccEEEecCCCCHHHHHHHHHhcceeeec
Q 003999 365 GMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGS---P----NYEPVVLIDRPVPRFEKSAYYAVAECCIVN 437 (780)
Q Consensus 365 ~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~---~----~~~pV~~~~~~v~~~el~aly~~ADv~vvt 437 (780)
+.. ||.| |- -++ =-..+++++++.|-+++. . ..++|.+.+ +.-|+..||++||++.|-
T Consensus 260 ~~l----lIlV--PR---HpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D---tmGEL~l~y~~adiAFVG 324 (419)
T COG1519 260 NLL----LILV--PR---HPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD---TMGELGLLYGIADIAFVG 324 (419)
T ss_pred Cce----EEEe--cC---Chh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe---cHhHHHHHHhhccEEEEC
Confidence 875 4433 32 232 234677788887755532 1 223465443 467999999999998873
Q ss_pred -cCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc----CCCCccccC---CCcEEECCCCHHHHHHHHHHH
Q 003999 438 -AVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS----EFIGCSPSL---SGAIRVNPWDIDAVADAMTLA 509 (780)
Q Consensus 438 -S~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S----e~~G~~~~l---~~al~VnP~d~~~~A~ai~~a 509 (780)
|+-.==|==++|..+|+ .|+|.. .|.-+.+.| ++++.|+. .+.++++++..
T Consensus 325 GSlv~~GGHN~LEpa~~~-------------------~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v~~l 383 (419)
T COG1519 325 GSLVPIGGHNPLEPAAFG-------------------TPVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAVELL 383 (419)
T ss_pred CcccCCCCCChhhHHHcC-------------------CCEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHHHHh
Confidence 44321123368999986 356653 333344444 24677774 78888888888
Q ss_pred HcCCHHHHHHHHHHHhhHhhhC
Q 003999 510 INMRDSEKQLRHEKHYRYVSTH 531 (780)
Q Consensus 510 L~m~~~er~~r~~~~~~~V~~~ 531 (780)
++. +.+|+.+.++..+.|..+
T Consensus 384 ~~~-~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 384 LAD-EDKREAYGRAGLEFLAQN 404 (419)
T ss_pred cCC-HHHHHHHHHHHHHHHHHh
Confidence 876 556777778888888665
|
|
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=98.18 E-value=3.7e-06 Score=85.07 Aligned_cols=151 Identities=17% Similarity=0.223 Sum_probs=98.0
Q ss_pred HHHHHHHhccCCCCEEEEEcCCChhhHHHHhc-c-C-C-CceEEecCccEEeeCCCCceEecCC-CcC-hhHHHHHHHHH
Q 003999 616 VISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA-P-C-E-MLGIAAEHGYFIRWNKTSEWETNHL-GAD-LEWKKIVEPVM 689 (780)
Q Consensus 616 ~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~-~-l-~-~lgliaenG~~ir~~~~~~w~~~~~-~~d-~~wk~~v~~i~ 689 (780)
+.+.|++|.+ ...|.||||-++..+++.+. . + . ..++.+|||..++..+...|...+. ... ..-++.+.-++
T Consensus 1 M~~~L~~L~~--~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKLRK--KVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHHHT--TSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHh--cCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 4678889987 69999999999999999884 2 1 1 3479999999888887667754321 111 12233344444
Q ss_pred HHHHh----cCCCceeecccceEEEee--ccCCC----Ccccc----cH-HHHHHHHHHHhcCCCeEE-EEcCeEEEEEe
Q 003999 690 RSYTE----ATDGSNIEIKESALVWHH--QDADP----DFGSC----QA-KELLDHLESVLANEPAVV-KRGQHIVEVKP 753 (780)
Q Consensus 690 ~~~~e----~t~gs~iE~k~~~l~~hy--r~ad~----d~~~~----qa-~el~~~L~~~l~~~~v~v-~~g~~~vEI~p 753 (780)
++..+ ...|.+||.+.+.+.+.- |+|.. +|.++ .. +.+++.|.+.+.+.++++ +-|+..+||.|
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp 158 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFP 158 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEcccc
Confidence 44443 246999999999988874 33421 12111 11 246677777778778886 46899999999
Q ss_pred CCCCHHHHHHHHHHH
Q 003999 754 QVLRPSSISVSLSLS 768 (780)
Q Consensus 754 ~gvsKG~al~~Ll~~ 768 (780)
+|++|..+++.|.+.
T Consensus 159 ~GwDKty~Lr~l~~~ 173 (220)
T PF03332_consen 159 KGWDKTYCLRHLEDE 173 (220)
T ss_dssp TT-SGGGGGGGTTTT
T ss_pred CCccHHHHHHHHHhc
Confidence 999999999998663
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=98.16 E-value=6.3e-06 Score=72.81 Aligned_cols=87 Identities=16% Similarity=0.237 Sum_probs=70.1
Q ss_pred eeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC-C--cEEECCCCHHHHHHHHHHH
Q 003999 433 CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-G--AIRVNPWDIDAVADAMTLA 509 (780)
Q Consensus 433 v~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~--al~VnP~d~~~~A~ai~~a 509 (780)
+++.|+..+|++...+|+|||| +|+|.+...+....+. | ++.++ |++++++++..+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G-------------------~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~l 59 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACG-------------------TPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYL 59 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCC-------------------CeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHH
Confidence 4677888899999999999996 4666666667777773 3 67788 999999999999
Q ss_pred HcCCHHHHHHHHHHHhhHhh-hCCHHHHHHHHH
Q 003999 510 INMRDSEKQLRHEKHYRYVS-THDVAYWARSFA 541 (780)
Q Consensus 510 L~m~~~er~~r~~~~~~~V~-~~~~~~Wa~~~l 541 (780)
++.|+ +++...++.+++|. .|++..=++.|+
T Consensus 60 l~~~~-~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 60 LENPE-ERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HCCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99764 67777788889987 688877777665
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=98.01 E-value=7.9e-05 Score=84.74 Aligned_cols=131 Identities=12% Similarity=0.138 Sum_probs=96.9
Q ss_pred cCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 003999 331 FDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (780)
Q Consensus 331 ~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~ 410 (780)
++++.++++ + ...|+|++.+.++.|++. |=+ |..+ ++..++.++ + +| .
T Consensus 281 ~~~~~l~~t-----~----s~~I~~i~~Lv~~lPd~~----f~I-ga~t--------e~s~kL~~L-~----~y-----~ 328 (438)
T TIGR02919 281 YRKQALILT-----N----SDQIEHLEEIVQALPDYH----FHI-AALT--------EMSSKLMSL-D----KY-----D 328 (438)
T ss_pred CcccEEEEC-----C----HHHHHHHHHHHHhCCCcE----EEE-EecC--------cccHHHHHH-H----hc-----C
Confidence 455556666 1 899999999999999987 654 5433 111334444 2 22 2
Q ss_pred cEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc--CCCCccccC
Q 003999 411 PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS--EFIGCSPSL 488 (780)
Q Consensus 411 pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S--e~~G~~~~l 488 (780)
.|+.+.+ +....+..+|..||+++.+|..||+++...||+..| .+|+| ...|-.+.+
T Consensus 329 nvvly~~-~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G--------------------~pI~afd~t~~~~~~i 387 (438)
T TIGR02919 329 NVKLYPN-ITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYN--------------------LLILGFEETAHNRDFI 387 (438)
T ss_pred CcEEECC-cChHHHHHHHHhccEEEEccccccHHHHHHHHHHcC--------------------CcEEEEecccCCcccc
Confidence 3666664 445678899999999999999999999999999864 44444 334555555
Q ss_pred CCcEEECCCCHHHHHHHHHHHHcCCH
Q 003999 489 SGAIRVNPWDIDAVADAMTLAINMRD 514 (780)
Q Consensus 489 ~~al~VnP~d~~~~A~ai~~aL~m~~ 514 (780)
.++.++++.|+++|+++|.++|+.+.
T Consensus 388 ~~g~l~~~~~~~~m~~~i~~lL~d~~ 413 (438)
T TIGR02919 388 ASENIFEHNEVDQLISKLKDLLNDPN 413 (438)
T ss_pred cCCceecCCCHHHHHHHHHHHhcCHH
Confidence 66889999999999999999999875
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.95 E-value=1.2e-05 Score=75.35 Aligned_cols=51 Identities=20% Similarity=0.246 Sum_probs=41.5
Q ss_pred ceEEeCCCCCCCCCCC---CCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHH
Q 003999 592 RAIFLDYDGTVVPETS---IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS 643 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~---~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~ 643 (780)
|+|++|+||||+.... ....+.++++++|++|.+ .|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~-~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKA-LGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHH-CCCEEEEECCCCchhhh
Confidence 6899999999987421 114578999999999988 49999999999987654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.84 E-value=3.4e-05 Score=81.74 Aligned_cols=71 Identities=15% Similarity=0.159 Sum_probs=57.0
Q ss_pred CceEEeCCCCCCCCCCCCCCCC---CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC--C-ceEEecCccEEee
Q 003999 591 RRAIFLDYDGTVVPETSIIKSP---GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE--M-LGIAAEHGYFIRW 664 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~p---s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~--~-lgliaenG~~ir~ 664 (780)
.++|+||+||||++ ..+.+ ++.+.++|++|.+. |+.++|+|++++..+.+.+..+. . ...|..+|...+.
T Consensus 126 ~kvIvFDLDgTLi~---~~~~v~irdPgV~EaL~~Lkek-GikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~ 201 (301)
T TIGR01684 126 PHVVVFDLDSTLIT---DEEPVRIRDPRIYDSLTELKKR-GCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEE 201 (301)
T ss_pred ceEEEEecCCCCcC---CCCccccCCHHHHHHHHHHHHC-CCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccC
Confidence 56999999999999 44443 59999999999995 99999999999998888887652 1 2467778877665
Q ss_pred C
Q 003999 665 N 665 (780)
Q Consensus 665 ~ 665 (780)
.
T Consensus 202 k 202 (301)
T TIGR01684 202 Y 202 (301)
T ss_pred C
Confidence 4
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.68 E-value=5e-05 Score=70.60 Aligned_cols=70 Identities=21% Similarity=0.247 Sum_probs=54.7
Q ss_pred eEEeCCCCCCCCCCCC-----CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC----CceEEecCccEEe
Q 003999 593 AIFLDYDGTVVPETSI-----IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE----MLGIAAEHGYFIR 663 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~-----~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~----~lgliaenG~~ir 663 (780)
+++||+||||.+..+. ...+.+.+.+.|++|++. |+.++|+|||....+..++..+. ...+++.++....
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 79 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK-GIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY 79 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC-CCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh
Confidence 5899999999995531 236789999999999995 89999999999999999997652 1245666665544
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00027 Score=75.08 Aligned_cols=71 Identities=18% Similarity=0.112 Sum_probs=54.9
Q ss_pred CceEEeCCCCCCCCCCCCCCCC---CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC--C-ceEEecCccEEee
Q 003999 591 RRAIFLDYDGTVVPETSIIKSP---GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE--M-LGIAAEHGYFIRW 664 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~p---s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~--~-lgliaenG~~ir~ 664 (780)
.++|++|+||||++ ....+ ++.+.++|.+|++. |..++|+|+.++..+...++.+. . ...+..+|.....
T Consensus 128 ~~~i~~D~D~TL~~---~~~~v~irdp~V~EtL~eLkek-GikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k 203 (303)
T PHA03398 128 PHVIVFDLDSTLIT---DEEPVRIRDPFVYDSLDELKER-GCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGE 203 (303)
T ss_pred ccEEEEecCCCccC---CCCccccCChhHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccc
Confidence 57999999999999 44455 68999999999994 99999999888888888777542 1 2356667765554
Q ss_pred C
Q 003999 665 N 665 (780)
Q Consensus 665 ~ 665 (780)
.
T Consensus 204 ~ 204 (303)
T PHA03398 204 Y 204 (303)
T ss_pred c
Confidence 4
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.00033 Score=74.37 Aligned_cols=54 Identities=19% Similarity=0.236 Sum_probs=41.7
Q ss_pred ceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHh
Q 003999 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL 646 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f 646 (780)
|+|+||+||||+......+.+.+.+.++|++|++. |.+|+++|||+....+...
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~-G~~~~~~Tn~~~~~~~~~~ 55 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGA-SVKVRFVTNTTKESKQDLL 55 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHC-CCeEEEEECCCCCCHHHHH
Confidence 68999999999983211123778999999999995 9999999998877643333
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.00058 Score=72.10 Aligned_cols=65 Identities=20% Similarity=0.256 Sum_probs=51.0
Q ss_pred ceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcC---CChhhHHHHhccCC----CceEEecCccE
Q 003999 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG---RGRSSLSEWLAPCE----MLGIAAEHGYF 661 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~f~~l~----~lgliaenG~~ 661 (780)
|+|++|+||||+. .+..+ +.+.++|++|++. |++|+++|| |++..+.+.+..+. .-.+++.+|+.
T Consensus 2 ~~~~~D~DGtl~~---~~~~i-~~a~~~l~~l~~~-g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~ 73 (249)
T TIGR01457 2 KGYLIDLDGTMYK---GKERI-PEAETFVHELQKR-DIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMAT 73 (249)
T ss_pred CEEEEeCCCceEc---CCeeC-cCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHH
Confidence 6899999999998 34444 4789999999995 999999995 88998888887542 22377777764
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.00045 Score=72.92 Aligned_cols=58 Identities=10% Similarity=0.152 Sum_probs=47.0
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCce
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLG 653 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lg 653 (780)
.++|++|+||||+. .+ ++.+.+.++|++|++. |.+++++|+|+.....++...+..+|
T Consensus 1 ~~~v~~DlDGtL~~---~~-~~~p~a~~~l~~L~~~-g~~~~~~Tn~~~~~~~~~~~~l~~~G 58 (248)
T PRK10444 1 IKNVICDIDGVLMH---DN-VAVPGAAEFLHRILDK-GLPLVLLTNYPSQTGQDLANRFATAG 58 (248)
T ss_pred CcEEEEeCCCceEe---CC-eeCccHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHcC
Confidence 36899999999998 33 5778999999999995 99999999999887766665543333
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0013 Score=62.12 Aligned_cols=56 Identities=20% Similarity=0.148 Sum_probs=43.4
Q ss_pred ceEEeCCCCCCCCCCC--CCC-------CCCHHHHHHHHHhccCCCCEEEEEcCC-ChhhHHHHhcc
Q 003999 592 RAIFLDYDGTVVPETS--IIK-------SPGPEVISVLKTLCSDPNNTVFIVSGR-GRSSLSEWLAP 648 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~--~~~-------~ps~~~~~~L~~L~~d~g~~V~IvSGR-~~~~L~~~f~~ 648 (780)
|+|++|+||||++... ... .+-+.+.++|+.|++. |..++|+|++ ........+..
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~-g~~l~i~Sn~~~~~~~~~~l~~ 66 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN-GFLLALASYNDDPHVAYELLKI 66 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC-CeEEEEEeCCCCHHHHHHHHHh
Confidence 6899999999998521 122 2468999999999985 9999999999 67666665543
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.001 Score=62.78 Aligned_cols=57 Identities=25% Similarity=0.328 Sum_probs=45.5
Q ss_pred ceEEeCCCCCCCCCCC-----CCCCCCHHHHHHHHHhccCCCCEEEEEcCCC--------hhhHHHHhccC
Q 003999 592 RAIFLDYDGTVVPETS-----IIKSPGPEVISVLKTLCSDPNNTVFIVSGRG--------RSSLSEWLAPC 649 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~-----~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~--------~~~L~~~f~~l 649 (780)
|+|+||+||||++... ....+.+.+.++|+.|.+. |++++|+|+++ ...+..++..+
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~-g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~ 70 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA-GYKVVIVTNQSGIGRGKFSSGRVARRLEEL 70 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC-CCEEEEEECCccccccHHHHHHHHHHHHHC
Confidence 6899999999996211 1235678899999999985 99999999999 77777777754
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.00068 Score=68.12 Aligned_cols=60 Identities=15% Similarity=0.120 Sum_probs=44.0
Q ss_pred ccCceEEeCCCCCCCCCC----CCCCCCCHHH---HHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 589 TERRAIFLDYDGTVVPET----SIIKSPGPEV---ISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~----~~~~~ps~~~---~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
...|+|++|+||||++.. ......+... ...++.|.+ .|+.++|+|||+...+...++.+
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~-~Gi~v~I~T~~~~~~v~~~l~~l 85 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLT-SGIEVAIITGRKSKLVEDRMTTL 85 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHH-CCCEEEEEeCCCcHHHHHHHHHc
Confidence 358999999999999841 1122222222 257777777 59999999999999998888765
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0021 Score=67.16 Aligned_cols=72 Identities=17% Similarity=0.195 Sum_probs=52.1
Q ss_pred ccCCHHHHHHHHHhccCceEEeCCCCCCCCCCC---CC-CCCC---------------------------HHHHHHHHHh
Q 003999 575 RRLSIDHIVSAYRKTERRAIFLDYDGTVVPETS---II-KSPG---------------------------PEVISVLKTL 623 (780)
Q Consensus 575 ~~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~---~~-~~ps---------------------------~~~~~~L~~L 623 (780)
.=.++++|.++-...+.-+|+||+||||++..+ .. ..++ +.+.++|+.|
T Consensus 47 ~~~~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l 126 (237)
T TIGR01672 47 HWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMH 126 (237)
T ss_pred eEEEHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHH
Confidence 345889999887766666999999999998654 11 1112 2278899999
Q ss_pred ccCCCCEEEEEcCC----ChhhHHHHhc
Q 003999 624 CSDPNNTVFIVSGR----GRSSLSEWLA 647 (780)
Q Consensus 624 ~~d~g~~V~IvSGR----~~~~L~~~f~ 647 (780)
.+. |.+++|||+| ....++..++
T Consensus 127 ~~~-G~~i~iVTnr~~~k~~~~a~~ll~ 153 (237)
T TIGR01672 127 QRR-GDAIFFVTGRTPGKTDTVSKTLAK 153 (237)
T ss_pred HHC-CCEEEEEeCCCCCcCHHHHHHHHH
Confidence 985 9999999999 4345555554
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.00065 Score=66.27 Aligned_cols=55 Identities=16% Similarity=0.161 Sum_probs=41.3
Q ss_pred ceEEeCCCCCCCCCCC---CCC-C-----CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 592 RAIFLDYDGTVVPETS---IIK-S-----PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~---~~~-~-----ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
|++|||+||||+++.. .+. . ..+. .+|++|++. |.+++|+||++...+...++.+
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~--~~i~~Lk~~-G~~i~IvTn~~~~~~~~~l~~~ 65 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYTNNGEEIKAFNVRDG--YGIRCALKS-GIEVAIITGRKAKLVEDRCKTL 65 (154)
T ss_pred eEEEEeCceeEEcCeEEECCCCcEEEEEechhH--HHHHHHHHC-CCEEEEEECCCCHHHHHHHHHc
Confidence 7999999999998421 111 1 1122 278999884 9999999999999998888765
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.001 Score=72.64 Aligned_cols=55 Identities=16% Similarity=0.117 Sum_probs=44.3
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.++|+||+||||.. .+ .+-+.+.++|++|++. |.+|+++|+|+.......+..+
T Consensus 27 ~~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~lr~~-g~~~~~~TN~~~~~~~~~~~~l 81 (311)
T PLN02645 27 SVETFIFDCDGVIWK---GD-KLIEGVPETLDMLRSM-GKKLVFVTNNSTKSRAQYGKKF 81 (311)
T ss_pred hCCEEEEeCcCCeEe---CC-ccCcCHHHHHHHHHHC-CCEEEEEeCCCCCCHHHHHHHH
Confidence 468999999999998 33 3557789999999995 9999999999966665555443
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0011 Score=71.21 Aligned_cols=51 Identities=18% Similarity=0.271 Sum_probs=39.7
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHh
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL 646 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f 646 (780)
.++|++|+||||+. ... +-+.+.++|++|.+. |.+|+++|||+.....+.+
T Consensus 2 ~~~~~~D~DGtl~~---~~~-~~~ga~e~l~~L~~~-g~~~~~~Tnns~~~~~~~~ 52 (279)
T TIGR01452 2 AQGFIFDCDGVLWL---GER-VVPGAPELLDRLARA-GKAALFVTNNSTKSRAEYA 52 (279)
T ss_pred ccEEEEeCCCceEc---CCe-eCcCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHH
Confidence 47899999999998 333 445689999999984 9999999998755444433
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0055 Score=60.60 Aligned_cols=49 Identities=22% Similarity=0.314 Sum_probs=36.7
Q ss_pred cCceEEeCCCCCCCCCCCCCC---C------CCHHHHHHHHHhccCCCCEEEEEcCCCh
Q 003999 590 ERRAIFLDYDGTVVPETSIIK---S------PGPEVISVLKTLCSDPNNTVFIVSGRGR 639 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~---~------ps~~~~~~L~~L~~d~g~~V~IvSGR~~ 639 (780)
+.|++++|+||||+...+... . +-+.+.++|++|.+. |.+++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE-GYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 358999999999997432110 1 236789999999984 999999997554
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.017 Score=56.17 Aligned_cols=64 Identities=22% Similarity=0.246 Sum_probs=54.2
Q ss_pred HhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceE
Q 003999 587 RKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGI 654 (780)
Q Consensus 587 ~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgl 654 (780)
++...|-|++|+|.||++.. +...++++++-+..+++. |++|+|+|-.....+..|...+ ++.+
T Consensus 24 ~~~Gikgvi~DlDNTLv~wd--~~~~tpe~~~W~~e~k~~-gi~v~vvSNn~e~RV~~~~~~l-~v~f 87 (175)
T COG2179 24 KAHGIKGVILDLDNTLVPWD--NPDATPELRAWLAELKEA-GIKVVVVSNNKESRVARAAEKL-GVPF 87 (175)
T ss_pred HHcCCcEEEEeccCceeccc--CCCCCHHHHHHHHHHHhc-CCEEEEEeCCCHHHHHhhhhhc-CCce
Confidence 45688999999999999964 356789999999999994 9999999999999998888765 3434
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.017 Score=60.78 Aligned_cols=85 Identities=26% Similarity=0.528 Sum_probs=58.5
Q ss_pred HHHHHHHHHcCC---CCCEEEEeCCccchHHHHHHHhcC------CCcEEEEEeCC-----CCChhHhh--cCCCh----
Q 003999 186 IFADKVMEVINP---DDDCVWVHDYHLMVLPTFLRKRFN------RIKLGFFLHSP-----FPSSEIYR--TLPVR---- 245 (780)
Q Consensus 186 ~fA~~v~~~~~~---~~DiVwvhDyhl~llp~~lr~~~~------~~~i~~flH~P-----fP~~e~~~--~lp~r---- 245 (780)
.|+.++++.++. .-|+||+||||..++|.+||.... ++++.|++|.. ||. +.+. .+|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~~~~~~~ 196 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLPDEYFQN 196 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-GGGGS-S
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCCHHHhcc
Confidence 455555555532 349999999999999999999853 69999999964 232 2221 12321
Q ss_pred ----------HHHHHhhhcCCEEEeecHHHHHHHHH
Q 003999 246 ----------DEILRGLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 246 ----------~eil~~ll~~Dligf~t~~y~~~Fl~ 271 (780)
.-+-.|+..||.|..-++.|++.-++
T Consensus 197 ~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 197 LDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp TTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred ccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 23446788999999999999876654
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.60 E-value=1.6 Score=48.30 Aligned_cols=273 Identities=16% Similarity=0.154 Sum_probs=143.1
Q ss_pred HhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCcc--chHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhh
Q 003999 175 VLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHL--MVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGL 252 (780)
Q Consensus 175 ~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl--~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l 252 (780)
..|..|.+.=+.+ .+ -+| |++..=|+.= ..+...+|+..|++||+++. ++.+| .||..-...+
T Consensus 69 ~llk~~~~~~~~i----~~-~kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV-----~PsVW---AWr~~Ra~~i 133 (381)
T COG0763 69 RLLKIRRELVRYI----LA-NKP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYV-----SPSVW---AWRPKRAVKI 133 (381)
T ss_pred HHHHHHHHHHHHH----Hh-cCC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEE-----Cccee---eechhhHHHH
Confidence 3466665433322 22 245 7777777652 35678899999999998754 23344 2444333333
Q ss_pred h-cCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc
Q 003999 253 L-NCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF 331 (780)
Q Consensus 253 l-~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~ 331 (780)
. .+|++.--.+... .|.+. .|+. ..|-|++. .|.-.+.+ ..+..|+++
T Consensus 134 ~~~~D~lLailPFE~-~~y~k----~g~~---------~~yVGHpl--------~d~i~~~~---------~r~~ar~~l 182 (381)
T COG0763 134 AKYVDHLLAILPFEP-AFYDK----FGLP---------CTYVGHPL--------ADEIPLLP---------DREAAREKL 182 (381)
T ss_pred HHHhhHeeeecCCCH-HHHHh----cCCC---------eEEeCChh--------hhhccccc---------cHHHHHHHh
Confidence 2 2455443222222 12210 1111 22444421 12111111 112355566
Q ss_pred ----CCCeEEEEe--ccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccC
Q 003999 332 ----DGKKLILGI--DDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYG 405 (780)
Q Consensus 332 ----~~~~vil~V--drld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g 405 (780)
..+.+.+-- -|-+..+-.+..++|++++.+++|+++ ++.=..+ ..++.++.+ ..+.-.. +
T Consensus 183 ~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~---~~~~~~~--~ 248 (381)
T COG0763 183 GIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEE---ALKWEVA--G 248 (381)
T ss_pred CCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHH---Hhhcccc--C
Confidence 234444333 345667778888899999999999988 4432211 333333222 2111100 0
Q ss_pred CCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc------
Q 003999 406 SPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS------ 479 (780)
Q Consensus 406 ~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S------ 479 (780)
..++ +...+....+.+||+.+..| |.+.+|++.|+.+ .|++
T Consensus 249 ----~~~~-----~~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P-------------------~Vv~Yk~~~i 295 (381)
T COG0763 249 ----LSLI-----LIDGEKRKAFAAADAALAAS-----GTATLEAALAGTP-------------------MVVAYKVKPI 295 (381)
T ss_pred ----ceEE-----ecCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCC-------------------EEEEEeccHH
Confidence 0122 23457788999999999998 8999999999753 3332
Q ss_pred -----------CCCCccccCCCcEEEC-----CCCHHHHHHHHHHHHcCCHH--HHHHHHHHHhhHhhhCCHHHHHHHH
Q 003999 480 -----------EFIGCSPSLSGAIRVN-----PWDIDAVADAMTLAINMRDS--EKQLRHEKHYRYVSTHDVAYWARSF 540 (780)
Q Consensus 480 -----------e~~G~~~~l~~al~Vn-----P~d~~~~A~ai~~aL~m~~~--er~~r~~~~~~~V~~~~~~~Wa~~~ 540 (780)
.+++....+-|..+|+ --.++.+|.++...+..+.. +..+....+++++.+..+..=+...
T Consensus 296 t~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~ 374 (381)
T COG0763 296 TYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQA 374 (381)
T ss_pred HHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 2333333332222121 12478999999999988732 2233445566666665344433333
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.0038 Score=56.42 Aligned_cols=48 Identities=21% Similarity=0.376 Sum_probs=34.8
Q ss_pred EEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHh
Q 003999 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL 646 (780)
Q Consensus 594 I~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f 646 (780)
|++|+||||.. ..++-+.+.++|++|++. |.+|+++|-.+...-+++.
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L~~~-g~~~~~lTNns~~s~~~~~ 48 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDALRER-GKPVVFLTNNSSRSREEYA 48 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHHHHT-TSEEEEEES-SSS-HHHHH
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHHHHc-CCCEEEEeCCCCCCHHHHH
Confidence 68999999997 234667889999999995 8999999766544433333
|
... |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.025 Score=59.19 Aligned_cols=62 Identities=16% Similarity=0.271 Sum_probs=46.1
Q ss_pred cCCHHHHHHHHHhccCceEEeCCCCCCCCCCCC-------------------------------CCCCCHHHHHHHHHhc
Q 003999 576 RLSIDHIVSAYRKTERRAIFLDYDGTVVPETSI-------------------------------IKSPGPEVISVLKTLC 624 (780)
Q Consensus 576 ~l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~-------------------------------~~~ps~~~~~~L~~L~ 624 (780)
=+++++|.++-...+...|.+|+|||+++.++. ...|-+.+++.|+.|.
T Consensus 48 ~~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~ 127 (237)
T PRK11009 48 WVSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHV 127 (237)
T ss_pred EEEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHH
Confidence 357888888754444569999999999963220 0113345899999998
Q ss_pred cCCCCEEEEEcCCC
Q 003999 625 SDPNNTVFIVSGRG 638 (780)
Q Consensus 625 ~d~g~~V~IvSGR~ 638 (780)
++ |++++++|||+
T Consensus 128 ~~-G~~I~iVTnR~ 140 (237)
T PRK11009 128 KR-GDSIYFITGRT 140 (237)
T ss_pred HC-CCeEEEEeCCC
Confidence 85 99999999996
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.03 Score=55.53 Aligned_cols=58 Identities=19% Similarity=0.216 Sum_probs=45.3
Q ss_pred hccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCC-hhhHHHHhcc
Q 003999 588 KTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRG-RSSLSEWLAP 648 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~-~~~L~~~f~~ 648 (780)
+...+++++|+||||+... ...+.+.+.++|+.|.+. |.+++|+|+.+ ...+..++..
T Consensus 22 ~~~v~~vv~D~Dgtl~~~~--~~~~~pgv~e~L~~Lk~~-g~~l~I~Sn~~~~~~~~~~~~~ 80 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYPD--HNEAYPALRDWIEELKAA-GRKLLIVSNNAGEQRAKAVEKA 80 (170)
T ss_pred HCCCCEEEEecCCccccCC--CCCcChhHHHHHHHHHHc-CCEEEEEeCCchHHHHHHHHHH
Confidence 3567999999999999843 235778899999999984 89999999998 4555555443
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.017 Score=55.52 Aligned_cols=62 Identities=19% Similarity=0.170 Sum_probs=41.9
Q ss_pred HhccCceEEeCCCCCCCCCCC---CC----CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 587 RKTERRAIFLDYDGTVVPETS---II----KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 587 ~~a~~rlI~lD~DGTL~~~~~---~~----~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.++.||+++|.||||++-.- .+ +...-.-=--|+.|.+ .|++|.|+|||.-.-+++..+.+
T Consensus 4 ra~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~-~Gi~vAIITGr~s~ive~Ra~~L 72 (170)
T COG1778 4 RAKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLK-SGIKVAIITGRDSPIVEKRAKDL 72 (170)
T ss_pred hhhhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHH-cCCeEEEEeCCCCHHHHHHHHHc
Confidence 345689999999999998320 11 1111111123445555 49999999999999999988765
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.02 Score=55.18 Aligned_cols=47 Identities=30% Similarity=0.382 Sum_probs=37.5
Q ss_pred ceEEeCCCCCCCCCCCCC-------CCCCHHHHHHHHHhccCCCCEEEEEcCCCh
Q 003999 592 RAIFLDYDGTVVPETSII-------KSPGPEVISVLKTLCSDPNNTVFIVSGRGR 639 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~-------~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~ 639 (780)
++++||+||||++..+.. .++-+.+.++|+.|.+. |.+++|+|+.+.
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~-g~~~~I~Sn~~~ 54 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA-GYTVVVVTNQSG 54 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC-CCEEEEEeCCCc
Confidence 378999999999965311 23567889999999985 999999998763
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.03 Score=58.11 Aligned_cols=58 Identities=19% Similarity=0.217 Sum_probs=44.9
Q ss_pred cCceEEeCCCCCCCCCCC-----------------------CCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhh---HH
Q 003999 590 ERRAIFLDYDGTVVPETS-----------------------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS---LS 643 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~-----------------------~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~---L~ 643 (780)
++-+++||+|-|+++..+ ...++-+.++++++.|.+. |+.|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~-G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIEL-GIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHH
Confidence 467999999999998531 1234558999999999995 99999999999765 55
Q ss_pred HHhcc
Q 003999 644 EWLAP 648 (780)
Q Consensus 644 ~~f~~ 648 (780)
+++..
T Consensus 155 ~nL~~ 159 (229)
T TIGR01675 155 DNLIN 159 (229)
T ss_pred HHHHH
Confidence 55543
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.35 Score=53.02 Aligned_cols=189 Identities=17% Similarity=0.191 Sum_probs=108.6
Q ss_pred CCHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc--------
Q 003999 577 LSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP-------- 648 (780)
Q Consensus 577 l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~-------- 648 (780)
|++.+|..--+..+-+||-||=|+||.+.+ ..-.++..++.-|-+|-+. |+.|.|||.=++....++...
T Consensus 133 LN~AQi~al~~~~~L~LvTFDgDvTLY~DG-~sl~~d~pvi~~ii~LL~~-gv~VgIVTAAGY~~a~kY~~RL~GLL~a~ 210 (408)
T PF06437_consen 133 LNTAQIMALAKNYGLKLVTFDGDVTLYEDG-ASLEPDNPVIPRIIKLLRR-GVKVGIVTAAGYPGAEKYEERLHGLLDAF 210 (408)
T ss_pred HHHHHHHHhcccCCceEEEEcCCcccccCC-CCCCCCchHHHHHHHHHhc-CCeEEEEeCCCCCChHHHHHHHHHHHHHH
Confidence 355555544344477899999999999965 2334556677666666663 899999999888765444322
Q ss_pred -----C-----CCc-eEEecCccEEeeCCC----------CceEecCCCcChhHHH-HHHHHHHH-------HHhc--CC
Q 003999 649 -----C-----EML-GIAAEHGYFIRWNKT----------SEWETNHLGADLEWKK-IVEPVMRS-------YTEA--TD 697 (780)
Q Consensus 649 -----l-----~~l-gliaenG~~ir~~~~----------~~w~~~~~~~d~~wk~-~v~~i~~~-------~~e~--t~ 697 (780)
+ .++ -+.+|.-++++...+ .+|.. +.+ ..|.+ .+..+++. ..++ .|
T Consensus 211 ~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~--~~m-~~W~~~dI~~lLD~AE~~L~~~~~~l~Lp 287 (408)
T PF06437_consen 211 KDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLL--PEM-KTWSEEDITELLDIAEAALRDCVKRLNLP 287 (408)
T ss_pred HhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccC--ccc-cCcCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 1 122 345666677776543 24542 111 23543 34444432 2221 34
Q ss_pred CceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcC------CCeEEEEc--CeEEEEEeCCCCHHHHHHHHHHHc
Q 003999 698 GSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLAN------EPAVVKRG--QHIVEVKPQVLRPSSISVSLSLSV 769 (780)
Q Consensus 698 gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~------~~v~v~~g--~~~vEI~p~gvsKG~al~~Ll~~l 769 (780)
..|-.|+-++-.-- .....+...|.+|+.-.++..+.. .|+....| .-||||- +|..+++.+.+.+
T Consensus 288 -a~IiRK~RAVGivP-~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDIG----dKs~GV~~lQ~y~ 361 (408)
T PF06437_consen 288 -ATIIRKERAVGIVP-KPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDIG----DKSLGVRALQKYF 361 (408)
T ss_pred -eeEEeecceeeEec-CCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEcC----CcHHhHHHHHHHH
Confidence 45555655443321 111112223455554444443332 35555543 4578884 8999999999999
Q ss_pred ----CCCCCcc
Q 003999 770 ----CVRARAC 776 (780)
Q Consensus 770 ----~i~~~~~ 776 (780)
+|.+.+|
T Consensus 362 ~~~~~i~~~~t 372 (408)
T PF06437_consen 362 DPEGGIKPSET 372 (408)
T ss_pred HhccCCCccce
Confidence 8998876
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.032 Score=60.30 Aligned_cols=58 Identities=22% Similarity=0.338 Sum_probs=47.0
Q ss_pred cCceEEeCCCCCCCCCCCC---------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 590 ERRAIFLDYDGTVVPETSI---------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~---------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
+.+++++|+||||...... +..+.+.+.++|++|.+. |.+++|+|||+....+..+..
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~i~i~T~r~~~~~~~~l~~ 223 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA-GYEIIVVSGRDGVCEEDTVEW 223 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC-CCEEEEEeCCChhhHHHHHHH
Confidence 4579999999999974421 346778999999999985 999999999999887665543
|
|
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.00 E-value=2.7 Score=47.01 Aligned_cols=252 Identities=18% Similarity=0.219 Sum_probs=131.5
Q ss_pred HcCCCCCEEEEeCCcc--chHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHH
Q 003999 194 VINPDDDCVWVHDYHL--MVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 194 ~~~~~~DiVwvhDyhl--~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~ 271 (780)
..+| |+|..=||.= +-+...+|++.+..|+.++. +|.+|.==++|-..++... |.+--- +.+-..|.+
T Consensus 80 ~~~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI-----~PqvWAWr~~R~~~i~~~~--D~ll~i-fPFE~~~y~ 149 (373)
T PF02684_consen 80 EEKP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYI-----SPQVWAWRPGRAKKIKKYV--DHLLVI-FPFEPEFYK 149 (373)
T ss_pred HcCC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEE-----CCceeeeCccHHHHHHHHH--hheeEC-CcccHHHHh
Confidence 3356 8888888863 36778999998888787654 3445433345555554433 332211 111122322
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--CCCeEE--EEecccc-cc
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLI--LGIDDMD-IF 346 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~--~~~~vi--l~Vdrld-~~ 346 (780)
+.| +-..|-|+.. +|.- .. .+. ....++.+ +++++| |-=+|-. ..
T Consensus 150 ------------~~g-~~~~~VGHPl--------~d~~--~~---~~~----~~~~~~~~l~~~~~iIaLLPGSR~~EI~ 199 (373)
T PF02684_consen 150 ------------KHG-VPVTYVGHPL--------LDEV--KP---EPD----RAEAREKLLDPDKPIIALLPGSRKSEIK 199 (373)
T ss_pred ------------ccC-CCeEEECCcc--------hhhh--cc---CCC----HHHHHHhcCCCCCcEEEEeCCCCHHHHH
Confidence 111 1233444431 1211 10 011 11222332 344432 2245554 55
Q ss_pred CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHH
Q 003999 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (780)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~a 426 (780)
+.++..++|.+++.+++|+++ ++....+. .. ...+.+..... +. + .++..+ ..+...
T Consensus 200 rllP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~~---~~~i~~~~~~~----~~-~-~~~~~~-----~~~~~~ 256 (373)
T PF02684_consen 200 RLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----VH---EELIEEILAEY----PP-D-VSIVII-----EGESYD 256 (373)
T ss_pred HHHHHHHHHHHHHHHhCCCeE----EEEecCCH-----HH---HHHHHHHHHhh----CC-C-CeEEEc-----CCchHH
Confidence 566889999999999999987 55433221 11 11233332222 11 1 123322 245777
Q ss_pred HHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCCC-----cEEECCCCHHH
Q 003999 427 YYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSG-----AIRVNPWDIDA 501 (780)
Q Consensus 427 ly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~-----al~VnP~d~~~ 501 (780)
.++.||+.+++| |.+.+|++..+.+.-..=+..-... -=...+|-..+.|....+-| -++-+-.+++.
T Consensus 257 ~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~--~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~ 329 (373)
T PF02684_consen 257 AMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTY--FIAKRLVKVKYISLPNIIAGREVVPELIQEDATPEN 329 (373)
T ss_pred HHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHH--HHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHH
Confidence 899999999999 8999999998753100000000000 00011222556666655532 24555678999
Q ss_pred HHHHHHHHHcCCHH
Q 003999 502 VADAMTLAINMRDS 515 (780)
Q Consensus 502 ~A~ai~~aL~m~~~ 515 (780)
+++++...|..++.
T Consensus 330 i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 330 IAAELLELLENPEK 343 (373)
T ss_pred HHHHHHHHhcCHHH
Confidence 99999999987754
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.08 Score=51.09 Aligned_cols=99 Identities=14% Similarity=0.264 Sum_probs=50.6
Q ss_pred HHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChH-----HHHHh-hhcCCEEEeec
Q 003999 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRD-----EILRG-LLNCDLIGFHT 262 (780)
Q Consensus 189 ~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~-----eil~~-ll~~Dligf~t 262 (780)
.++++..++ |+|++|.++...+...... +.++.+++|.+++.........+.. .+.+. .-.+|.+-..+
T Consensus 73 ~~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS 147 (177)
T PF13439_consen 73 RRLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVS 147 (177)
T ss_dssp HHHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESS
T ss_pred HHHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEEC
Confidence 334444465 8999999887765443322 8899999999874211111111111 11112 24578887777
Q ss_pred HHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhh
Q 003999 263 FDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLE 312 (780)
Q Consensus 263 ~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~ 312 (780)
..-++.+.+ .|+. ..+|.++|+|||.++|+
T Consensus 148 ~~~~~~l~~-----~~~~---------------~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 148 ESTKDELIK-----FGIP---------------PEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHHHH-----hCCc---------------ccCCEEEECCccHHHcC
Confidence 765555543 2321 23689999999999884
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.048 Score=55.40 Aligned_cols=62 Identities=24% Similarity=0.252 Sum_probs=48.8
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCCC---CCC---------CCCHHHHHHHHHhccCCCCEEEEEcCCChh
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETS---IIK---------SPGPEVISVLKTLCSDPNNTVFIVSGRGRS 640 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~---~~~---------~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~ 640 (780)
..+.++..+++.+.|+|++|+|-||++..+ .+. .++++++..+.+|.+. |+.|+|||=-+..
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~-~I~v~VVTfSd~~ 103 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNS-NIKISVVTFSDKE 103 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHC-CCeEEEEEccchh
Confidence 456677888899999999999999998321 112 2689999999999984 9999999855543
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=94.61 E-value=8.1 Score=42.88 Aligned_cols=248 Identities=17% Similarity=0.099 Sum_probs=124.9
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhc--CCEEEeecHHHHHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLN--CDLIGFHTFDYARHF 269 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~--~Dligf~t~~y~~~F 269 (780)
.+..+| |+|.||.=-.-.+..-+-....++||++. |-=-=+.|. .-|.-+|+.|-+.. ||+----|..+.++.
T Consensus 63 ~~~~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d~--~~g~~de~~R~~i~~la~lhf~~t~~~~~~L 137 (346)
T PF02350_consen 63 LEREKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGDR--TEGMPDEINRHAIDKLAHLHFAPTEEARERL 137 (346)
T ss_dssp HHHHT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S-T--TSSTTHHHHHHHHHHH-SEEEESSHHHHHHH
T ss_pred HHhcCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCcccc--CCCCchhhhhhhhhhhhhhhccCCHHHHHHH
Confidence 344577 89999987766666655555668887643 211001111 12455666666553 788777788888777
Q ss_pred HHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEecccccc---
Q 003999 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIF--- 346 (780)
Q Consensus 270 l~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~--- 346 (780)
++ +|.+.. + +. .+-.+++|.-........+.. ....+.....++.+++..-|....
T Consensus 138 ~~-----~G~~~~--r----I~--------~vG~~~~D~l~~~~~~~~~~~--~~~~i~~~~~~~~iLvt~H~~t~~~~~ 196 (346)
T PF02350_consen 138 LQ-----EGEPPE--R----IF--------VVGNPGIDALLQNKEEIEEKY--KNSGILQDAPKPYILVTLHPVTNEDNP 196 (346)
T ss_dssp HH-----TT--GG--G----EE--------E---HHHHHHHHHHHTTCC-H--HHHHHHHCTTSEEEEEE-S-CCCCTHH
T ss_pred Hh-----cCCCCC--e----EE--------EEChHHHHHHHHhHHHHhhhh--hhHHHHhccCCCEEEEEeCcchhcCCh
Confidence 75 344221 1 11 122346664432221111110 011222223344455555444433
Q ss_pred CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHH
Q 003999 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (780)
Q Consensus 347 KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~a 426 (780)
......+.+++.+.+. +++. +|....++ + .....+.+...++ ..|+++ .+++..++.+
T Consensus 197 ~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~----p---~~~~~i~~~l~~~---------~~v~~~-~~l~~~~~l~ 254 (346)
T PF02350_consen 197 ERLEQILEALKALAER-QNVP----VIFPLHNN----P---RGSDIIIEKLKKY---------DNVRLI-EPLGYEEYLS 254 (346)
T ss_dssp --HHHHHHHHHHHHHH-TTEE----EEEE--S-----H---HHHHHHHHHHTT----------TTEEEE-----HHHHHH
T ss_pred HHHHHHHHHHHHHHhc-CCCc----EEEEecCC----c---hHHHHHHHHhccc---------CCEEEE-CCCCHHHHHH
Confidence 3466777788888776 5543 44443222 1 1222232222221 136655 4889999999
Q ss_pred HHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC---CCcEEECCCCHHHHH
Q 003999 427 YYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL---SGAIRVNPWDIDAVA 503 (780)
Q Consensus 427 ly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~al~VnP~d~~~~A 503 (780)
+++.|+++|-.|- | +..||..++. |+|.=...|-.++. ...++|. .|.+++.
T Consensus 255 ll~~a~~vvgdSs--G---I~eEa~~lg~-------------------P~v~iR~~geRqe~r~~~~nvlv~-~~~~~I~ 309 (346)
T PF02350_consen 255 LLKNADLVVGDSS--G---IQEEAPSLGK-------------------PVVNIRDSGERQEGRERGSNVLVG-TDPEAII 309 (346)
T ss_dssp HHHHESEEEESSH--H---HHHHGGGGT---------------------EEECSSS-S-HHHHHTTSEEEET-SSHHHHH
T ss_pred HHhcceEEEEcCc--c---HHHHHHHhCC-------------------eEEEecCCCCCHHHHhhcceEEeC-CCHHHHH
Confidence 9999999987762 2 3349999874 44443444555544 2456665 7999999
Q ss_pred HHHHHHHcC
Q 003999 504 DAMTLAINM 512 (780)
Q Consensus 504 ~ai~~aL~m 512 (780)
+||.+++..
T Consensus 310 ~ai~~~l~~ 318 (346)
T PF02350_consen 310 QAIEKALSD 318 (346)
T ss_dssp HHHHHHHH-
T ss_pred HHHHHHHhC
Confidence 999999975
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.026 Score=56.15 Aligned_cols=47 Identities=28% Similarity=0.320 Sum_probs=36.7
Q ss_pred ceEEeCCCCCCCCCCCC-----CCCCCHHHHHHHHHhccCCCCEEEEEcCCCh
Q 003999 592 RAIFLDYDGTVVPETSI-----IKSPGPEVISVLKTLCSDPNNTVFIVSGRGR 639 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~-----~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~ 639 (780)
+++|+|.||||+..... +..+-+.+.++|++|++. |.+++|+|.-+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKM-GYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHC-CCEEEEEeCCcc
Confidence 79999999999952211 223457899999999984 999999998763
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.031 Score=59.47 Aligned_cols=59 Identities=25% Similarity=0.322 Sum_probs=43.2
Q ss_pred ccCceEEeCCCCCCCCCCCC-----------------------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHH--
Q 003999 589 TERRAIFLDYDGTVVPETSI-----------------------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS-- 643 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~-----------------------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~-- 643 (780)
.+..+|++|+|+|+++..+. ...+-+.+.+.|+.|.+. |..++|+|+|+.....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~-G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSK-GVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHC-CCeEEEEeCCCcchHHHH
Confidence 45679999999999875421 112346788999999885 9999999999855433
Q ss_pred -HHhcc
Q 003999 644 -EWLAP 648 (780)
Q Consensus 644 -~~f~~ 648 (780)
.++..
T Consensus 152 ~~~Lkk 157 (266)
T TIGR01533 152 LKNLKR 157 (266)
T ss_pred HHHHHH
Confidence 55543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.032 Score=55.46 Aligned_cols=50 Identities=28% Similarity=0.353 Sum_probs=39.5
Q ss_pred ccCceEEeCCCCCCCCCCCC----CCCCCHHHHHHHHHhccCCCCEEEEEcCCCh
Q 003999 589 TERRAIFLDYDGTVVPETSI----IKSPGPEVISVLKTLCSDPNNTVFIVSGRGR 639 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~----~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~ 639 (780)
+..|+|++|.||||.++... .-.+-+.+.++|++|++. |.+++|+|+.+.
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-G~~l~I~Tn~~~ 55 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN-HIKIFSFTNQPG 55 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC-CCEEEEEECCch
Confidence 45789999999999875331 223458899999999985 999999998763
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=94.37 E-value=1.8 Score=47.03 Aligned_cols=168 Identities=15% Similarity=0.205 Sum_probs=106.9
Q ss_pred CCeEEEEeccccccCChHHHHHHHHHHHHhC---CCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 003999 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQH---PGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~---P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~ 409 (780)
...++++--...+-..+.-+|.|.+..-++. +.---++ |++|+ |.||..+.+.++|++. +|
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~l-lciIT----GKGPlkE~Y~~~I~~~-----------~~ 317 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSL-LCIIT----GKGPLKEKYSQEIHEK-----------NL 317 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEc----CCCchhHHHHHHHHHh-----------cc
Confidence 4578888888999999999999998442211 1000122 33344 4677777777776654 45
Q ss_pred ccEEEecCCCCHHHHHHHHHhcce--eeeccCCcCCCcch--hhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc
Q 003999 410 EPVVLIDRPVPRFEKSAYYAVAEC--CIVNAVRDGMNLVP--YKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (780)
Q Consensus 410 ~pV~~~~~~v~~~el~aly~~ADv--~vvtS~rEGmnLv~--~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (780)
+.|.+.+--+.-++.+.++..||. |+=||. -|.-|+. ....-|+ -|+++-.|- |-
T Consensus 318 ~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSS-SGLDLPMKVVDMFGcg-------------------lPvcA~~fk-cl 376 (444)
T KOG2941|consen 318 QHVQVCTPWLEAEDYPKLLASADLGVCLHTSS-SGLDLPMKVVDMFGCG-------------------LPVCAVNFK-CL 376 (444)
T ss_pred cceeeeecccccccchhHhhccccceEeeecC-cccCcchhHHHhhcCC-------------------Cceeeecch-hH
Confidence 668777767888999999999995 455553 4555543 3444453 355555565 44
Q ss_pred ccC----CCcEEECCCCHHHHHHHHHHHHcC---CHHHHHHHHHHHhhHhhhCCHHHHHHHHHHH
Q 003999 486 PSL----SGAIRVNPWDIDAVADAMTLAINM---RDSEKQLRHEKHYRYVSTHDVAYWARSFAQD 543 (780)
Q Consensus 486 ~~l----~~al~VnP~d~~~~A~ai~~aL~m---~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~ 543 (780)
.+| .+|++++ |.+++|+.|..+.+. +..+- .+.++.+.+..-.+|..+--+.
T Consensus 377 ~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l----~~lkkn~~e~~e~RW~~~W~~~ 435 (444)
T KOG2941|consen 377 DELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADEL----NQLKKNLREEQELRWDESWERT 435 (444)
T ss_pred HHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHH----HHHHHhhHHHHhhhHHHHHHHh
Confidence 444 2599998 899999999999972 22221 1334444445557777765443
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.061 Score=56.28 Aligned_cols=50 Identities=24% Similarity=0.359 Sum_probs=40.7
Q ss_pred EEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc---CCChhhHHHHhcc
Q 003999 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAP 648 (780)
Q Consensus 594 I~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~f~~ 648 (780)
++||+||||++ ... +-+.+.++|+.|.+. |.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~---~~~-~~~~a~e~i~~l~~~-g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWL---GHK-PIPGAAEALNRLRAK-GKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCc---CCc-cCcCHHHHHHHHHHC-CCeEEEEECCCCCCHHHHHHHHHH
Confidence 58999999998 333 344889999999884 89999997 9999988777765
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.041 Score=54.02 Aligned_cols=43 Identities=30% Similarity=0.431 Sum_probs=31.4
Q ss_pred ceEEeCCCCCCCCCCCCCC--------C-CCHHHHHHHHHhccCCCCEEEEEc
Q 003999 592 RAIFLDYDGTVVPETSIIK--------S-PGPEVISVLKTLCSDPNNTVFIVS 635 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~--------~-ps~~~~~~L~~L~~d~g~~V~IvS 635 (780)
|+.+||+||||+...+... . ..+.+.++|++|.++ |..++|+|
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~-Gy~IvIvT 52 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK-GYKIVIVT 52 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT-TEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc-CCeEEEEe
Confidence 5889999999987543211 1 235799999999885 99999998
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.61 Score=52.74 Aligned_cols=138 Identities=11% Similarity=0.068 Sum_probs=80.4
Q ss_pred eEEEEecc-ccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhh---------cc
Q 003999 335 KLILGIDD-MDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINE---------VY 404 (780)
Q Consensus 335 ~vil~Vdr-ld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~---------~~ 404 (780)
.++++-.| -+..++++..++|++++.++ |+++ ++....+. .+++.+++.+.+. .++. .|
T Consensus 208 lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~----~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 208 IALLPGSRPPEAYRNLKLLLRALEALPDS-QPFV----FLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSLF 276 (396)
T ss_pred EEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeE----EEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchhh
Confidence 45666777 56667889999999998655 5543 55444332 2333333332211 0100 00
Q ss_pred CCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCc
Q 003999 405 GSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC 484 (780)
Q Consensus 405 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~ 484 (780)
.. .++.++. ...+..++|+.||++|..| |-+..|+++++. |.|+--+-+-
T Consensus 277 ~~---~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~-------------------P~Ilip~~~~ 326 (396)
T TIGR03492 277 QK---GTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGK-------------------PVIQLPGKGP 326 (396)
T ss_pred cc---CceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCC-------------------CEEEEeCCCC
Confidence 00 0122221 2357889999999999886 456699999975 3333221111
Q ss_pred ------ccc---C-CCcEEECCCCHHHHHHHHHHHHcCC
Q 003999 485 ------SPS---L-SGAIRVNPWDIDAVADAMTLAINMR 513 (780)
Q Consensus 485 ------~~~---l-~~al~VnP~d~~~~A~ai~~aL~m~ 513 (780)
.+. + .+++.+...+++.+++++.++|+++
T Consensus 327 q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 327 QFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLADP 365 (396)
T ss_pred HHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcCH
Confidence 011 1 3466666678899999999999864
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.06 Score=55.23 Aligned_cols=37 Identities=16% Similarity=0.004 Sum_probs=30.0
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.+.|+.|++. |.+++|+||.....++.+...+
T Consensus 86 ~~~g~~~~l~~l~~~-g~~~~IvS~~~~~~~~~~l~~~ 122 (219)
T TIGR00338 86 LTEGAEELVKTLKEK-GYKVAVISGGFDLFAEHVKDKL 122 (219)
T ss_pred cCCCHHHHHHHHHHC-CCEEEEECCCcHHHHHHHHHHc
Confidence 346778899999884 8999999999888887777654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.043 Score=54.81 Aligned_cols=47 Identities=26% Similarity=0.354 Sum_probs=36.9
Q ss_pred CceEEeCCCCCCCCCCCC------CCCCCHHHHHHHHHhccCCCCEEEEEcCCC
Q 003999 591 RRAIFLDYDGTVVPETSI------IKSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~ 638 (780)
.|+++||.||||+..... ...+-+.+.++|++|++. |..++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~-g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQA-GYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHC-CCEEEEEeCCc
Confidence 589999999999764311 123457889999999984 89999999876
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.09 Score=51.94 Aligned_cols=49 Identities=29% Similarity=0.356 Sum_probs=40.6
Q ss_pred HhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCC-EEEEEcCC
Q 003999 587 RKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNN-TVFIVSGR 637 (780)
Q Consensus 587 ~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~-~V~IvSGR 637 (780)
++...|.|+||.|.||++. ....++++..+.++++++.-+. .|+|+|-.
T Consensus 37 k~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNs 86 (168)
T PF09419_consen 37 KKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNELKKQFGKDRVLIVSNS 86 (168)
T ss_pred hhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 5678999999999999974 4567889999999999986332 69999876
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=93.88 E-value=1.5 Score=50.22 Aligned_cols=106 Identities=19% Similarity=0.262 Sum_probs=62.9
Q ss_pred HHHc---CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhcc
Q 003999 328 EKQF---DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVY 404 (780)
Q Consensus 328 r~~~---~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~ 404 (780)
|++| .|..++.+..++ .|=-+..+..+.++|++-|+-+ |++...|. .+. +.+.+.+++ .
T Consensus 276 R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~--~~~------~~l~~~~~~----~ 337 (468)
T PF13844_consen 276 RAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPA--SGE------ARLRRRFAA----H 337 (468)
T ss_dssp TGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETST--THH------HHHHHHHHH----T
T ss_pred HHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCH--HHH------HHHHHHHHH----c
Confidence 4555 355555556666 5667899999999999999866 76665443 111 223333322 2
Q ss_pred CCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcc
Q 003999 405 GSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 405 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
|- +-..|+|.. ..+.+|..+.|+.+|||+-|..+-| +.+.+||+.+|
T Consensus 338 Gv-~~~Ri~f~~-~~~~~ehl~~~~~~DI~LDT~p~nG-~TTt~dALwmG 384 (468)
T PF13844_consen 338 GV-DPDRIIFSP-VAPREEHLRRYQLADICLDTFPYNG-GTTTLDALWMG 384 (468)
T ss_dssp TS--GGGEEEEE----HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT
T ss_pred CC-ChhhEEEcC-CCCHHHHHHHhhhCCEEeeCCCCCC-cHHHHHHHHcC
Confidence 43 223577654 6688899999999999999987766 56788999986
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=93.80 E-value=0.079 Score=55.57 Aligned_cols=54 Identities=20% Similarity=0.350 Sum_probs=41.7
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHH--HHhcc
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS--EWLAP 648 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~--~~f~~ 648 (780)
+.+++++|+||||... ..+-+.+.++|++|++. |.+++|+|..++.... +.+..
T Consensus 7 ~~~~~~~D~dG~l~~~----~~~~pga~e~L~~L~~~-G~~~~ivTN~~~~~~~~~~~L~~ 62 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDG----NHTYPGAVQNLNKIIAQ-GKPVYFVSNSPRNIFSLHKTLKS 62 (242)
T ss_pred cCCEEEEecccccccC----CccCccHHHHHHHHHHC-CCEEEEEeCCCCChHHHHHHHHH
Confidence 3579999999999973 34678999999999985 9999999887665433 44443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.051 Score=55.95 Aligned_cols=36 Identities=25% Similarity=0.344 Sum_probs=30.0
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
-+.+.++|+.|++. |.+++|+||.....++..+..+
T Consensus 86 ~pg~~e~l~~l~~~-g~~~~IvS~~~~~~i~~~l~~~ 121 (224)
T PLN02954 86 SPGIPELVKKLRAR-GTDVYLVSGGFRQMIAPVAAIL 121 (224)
T ss_pred CccHHHHHHHHHHC-CCEEEEECCCcHHHHHHHHHHh
Confidence 36677888998884 9999999999999998877754
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.08 Score=61.63 Aligned_cols=50 Identities=26% Similarity=0.273 Sum_probs=38.7
Q ss_pred ccCceEEeCCCCCCCCCCCC--------CC-CCCHHHHHHHHHhccCCCCEEEEEcCCCh
Q 003999 589 TERRAIFLDYDGTVVPETSI--------IK-SPGPEVISVLKTLCSDPNNTVFIVSGRGR 639 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~--------~~-~ps~~~~~~L~~L~~d~g~~V~IvSGR~~ 639 (780)
.+.|+++||+||||....+. +. .+-+.+.+.|++|.++ |.+++|+|..+.
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~-Gy~IvIvTNQ~g 224 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD-GFKICIFTNQGG 224 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC-CCEEEEEECCcc
Confidence 45799999999999964321 11 1357899999999995 999999998655
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=93.57 E-value=0.1 Score=53.75 Aligned_cols=36 Identities=14% Similarity=0.057 Sum_probs=29.8
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.+.|+.|++ .|++++|+||.....++.++..+
T Consensus 76 ~pG~~e~l~~l~~-~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 76 REGFHEFVQFVKE-NNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CcCHHHHHHHHHH-cCCeEEEECCCcHHHHHHHHHHh
Confidence 4566788888887 49999999999999988888763
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.52 E-value=0.1 Score=55.84 Aligned_cols=35 Identities=26% Similarity=0.335 Sum_probs=29.7
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|.+. |++++|+|+.....+...+..+
T Consensus 145 pg~~e~L~~L~~~-gi~laIvSn~~~~~~~~~L~~~ 179 (273)
T PRK13225 145 PGVADLLAQLRSR-SLCLGILSSNSRQNIEAFLQRQ 179 (273)
T ss_pred CCHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHc
Confidence 5677888999884 8999999999999998888764
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.079 Score=56.05 Aligned_cols=51 Identities=22% Similarity=0.335 Sum_probs=39.5
Q ss_pred cCceEEeCCCCCCCCCCC-----------------C-------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhh
Q 003999 590 ERRAIFLDYDGTVVPETS-----------------I-------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS 641 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~-----------------~-------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~ 641 (780)
.+-+++||+|+|+++..+ . ..++-+.+++.++.|.+. |.+|+++|||+-..
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~-G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSL-GFKIIFLSGRLKDK 174 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHC-CCEEEEEeCCchhH
Confidence 356999999999995321 0 233457899999999984 99999999998654
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.19 Score=55.13 Aligned_cols=37 Identities=16% Similarity=-0.053 Sum_probs=28.5
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.+.|+.|++. |.+++|+||......+.....+
T Consensus 182 l~pGa~elL~~Lk~~-G~~~aIvSgg~~~~~~~l~~~L 218 (322)
T PRK11133 182 LMPGLTELVLKLQAL-GWKVAIASGGFTYFADYLRDKL 218 (322)
T ss_pred CChhHHHHHHHHHHc-CCEEEEEECCcchhHHHHHHHc
Confidence 456677888999884 9999999998876666665544
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.17 Score=50.85 Aligned_cols=35 Identities=14% Similarity=-0.042 Sum_probs=28.8
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.|+.|.+. |..++|+||.....++.++..+
T Consensus 83 ~g~~e~l~~l~~~-g~~~~IvS~~~~~~~~~~l~~~ 117 (201)
T TIGR01491 83 DYAEELVRWLKEK-GLKTAIVSGGIMCLAKKVAEKL 117 (201)
T ss_pred ccHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHh
Confidence 4556788888884 9999999999999888887654
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.12 Score=50.82 Aligned_cols=35 Identities=17% Similarity=0.044 Sum_probs=29.3
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.|+.+.+. |..++|+||.....++.++..+
T Consensus 76 ~g~~~~l~~l~~~-g~~~~ivS~~~~~~i~~~~~~~ 110 (177)
T TIGR01488 76 PGARELISWLKER-GIDTVIVSGGFDFFVEPVAEKL 110 (177)
T ss_pred cCHHHHHHHHHHC-CCEEEEECCCcHHHHHHHHHHc
Confidence 5677888888874 8999999999999998888754
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=92.86 E-value=0.14 Score=51.07 Aligned_cols=58 Identities=28% Similarity=0.163 Sum_probs=44.1
Q ss_pred CceEEeCCCCCCCCCCCC-----------------------CCCCCHHHHHHHHHhccCCCCEEEEEcCC-ChhhHHHHh
Q 003999 591 RRAIFLDYDGTVVPETSI-----------------------IKSPGPEVISVLKTLCSDPNNTVFIVSGR-GRSSLSEWL 646 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~-----------------------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR-~~~~L~~~f 646 (780)
.||++||+|+||.++.-+ ...+-+.+.++|+.|.+ .|.+++|+|+. ....+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~-~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKD-AGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHH-CCCEEEEEeCCCChHHHHHHH
Confidence 489999999999875310 01234789999999998 49999999998 777777666
Q ss_pred ccC
Q 003999 647 APC 649 (780)
Q Consensus 647 ~~l 649 (780)
..+
T Consensus 81 ~~~ 83 (174)
T TIGR01685 81 GTF 83 (174)
T ss_pred HhC
Confidence 543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.59 E-value=0.11 Score=51.09 Aligned_cols=45 Identities=24% Similarity=0.337 Sum_probs=35.3
Q ss_pred ceEEeCCCCCCCCCCCCC--------CCCCHHHHHHHHHhccCCCCEEEEEcCC
Q 003999 592 RAIFLDYDGTVVPETSII--------KSPGPEVISVLKTLCSDPNNTVFIVSGR 637 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~--------~~ps~~~~~~L~~L~~d~g~~V~IvSGR 637 (780)
++++||.||||....+.. ..+-+.+.++|++|.+. |.+++|+|..
T Consensus 2 ~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-g~~l~IvSN~ 54 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA-GYKFVMVTNQ 54 (161)
T ss_pred CEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC-CCeEEEEeCC
Confidence 689999999998743211 13447799999999984 8999999985
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.098 Score=51.89 Aligned_cols=58 Identities=12% Similarity=0.031 Sum_probs=44.6
Q ss_pred CceEEeCCCCCCCCCCC---C----CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 591 RRAIFLDYDGTVVPETS---I----IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~---~----~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.|+++||+||||++-+- . .+..+..--..++.|.+ .|..++|+|+++...+...+..+
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~-~Gi~laIiT~k~~~~~~~~l~~l 71 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQL-CGIDVAIITSKKSGAVRHRAEEL 71 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHH-CCCEEEEEECCCcHHHHHHHHHC
Confidence 68999999999998530 0 12234445567778887 49999999999999999988765
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=91.67 E-value=0.2 Score=51.28 Aligned_cols=35 Identities=26% Similarity=0.196 Sum_probs=28.7
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|++. |..++|+||.....+...+..+
T Consensus 85 ~g~~~~l~~L~~~-g~~~~i~S~~~~~~~~~~l~~~ 119 (214)
T PRK13288 85 ETVYETLKTLKKQ-GYKLGIVTTKMRDTVEMGLKLT 119 (214)
T ss_pred cCHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHc
Confidence 4567889999884 8999999999998888777654
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=91.65 E-value=0.31 Score=53.47 Aligned_cols=57 Identities=14% Similarity=0.085 Sum_probs=46.6
Q ss_pred CceEEeCCCCCCCCCC--CC-----C-CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 591 RRAIFLDYDGTVVPET--SI-----I-KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~--~~-----~-~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
.|+|++|+|+||.... .. . ..+-+.+.++|++|.+ .|+.++|+|..+...+.+.|..
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~-~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKK-QGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred eEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHh-CCCEEEEEcCCCHHHHHHHHHh
Confidence 6899999999998743 10 1 1244789999999998 4999999999999999988876
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.54 E-value=0.19 Score=55.64 Aligned_cols=47 Identities=26% Similarity=0.403 Sum_probs=37.9
Q ss_pred cCceEEeCCCCCCCCCCC--------CCCCCCHHHHHHHHHhccCCCCEEEEEcCC
Q 003999 590 ERRAIFLDYDGTVVPETS--------IIKSPGPEVISVLKTLCSDPNNTVFIVSGR 637 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~--------~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR 637 (780)
+++++|+|.||||....+ ....+-+.+.++|..|.+ .|.+++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~-~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQK-AGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHh-CCCeEEEEECC
Confidence 468999999999998432 123556889999999987 49999999985
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=91.48 E-value=0.26 Score=50.65 Aligned_cols=36 Identities=8% Similarity=0.039 Sum_probs=29.3
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.+.|+.|.+. |++++|+||.....++.++..+
T Consensus 72 ~pg~~e~l~~l~~~-g~~~~IvS~~~~~~i~~il~~~ 107 (214)
T TIGR03333 72 REGFREFVAFINEH-GIPFYVISGGMDFFVYPLLEGI 107 (214)
T ss_pred cccHHHHHHHHHHC-CCeEEEECCCcHHHHHHHHHhh
Confidence 35666888888874 9999999999999888887654
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=90.75 E-value=0.31 Score=48.28 Aligned_cols=36 Identities=8% Similarity=0.064 Sum_probs=26.3
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.+.|+.|.+ .|..++|+|+.....++.++...
T Consensus 74 ~~g~~~ll~~l~~-~g~~~~i~S~~~~~~~~~~l~~~ 109 (188)
T TIGR01489 74 DPGFKEFIAFIKE-HGIDFIVISDGNDFFIDPVLEGI 109 (188)
T ss_pred CccHHHHHHHHHH-cCCcEEEEeCCcHHHHHHHHHHc
Confidence 3456677777776 47888899888888777776653
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=90.64 E-value=0.037 Score=57.73 Aligned_cols=77 Identities=19% Similarity=0.236 Sum_probs=50.5
Q ss_pred ccCceEEeCCCCCCCCCCCC-----------------------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHH
Q 003999 589 TERRAIFLDYDGTVVPETSI-----------------------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEW 645 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~-----------------------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~ 645 (780)
-+..+|+||+|+|+++..+. ...+-+.+++.++.+.+. |..|+++|||+...-..-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~-G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSR-GVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHT-TEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHC-CCeEEEEecCCchhHHHH
Confidence 45679999999999863211 112235688999999995 999999999997754433
Q ss_pred hccCCCceEEecCccEEeeCC
Q 003999 646 LAPCEMLGIAAEHGYFIRWNK 666 (780)
Q Consensus 646 f~~l~~lgliaenG~~ir~~~ 666 (780)
...+...|+-.-.+.+++..+
T Consensus 149 ~~nL~~~G~~~~~~l~lr~~~ 169 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILRPDK 169 (229)
T ss_dssp HHHHHHHTTSTBSCGEEEEES
T ss_pred HHHHHHcCCCccchhcccccc
Confidence 333333343333555666543
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=90.63 E-value=0.31 Score=46.06 Aligned_cols=68 Identities=18% Similarity=0.134 Sum_probs=40.1
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHH----H-HhhhcCCEEEeecHHHHHHHHH
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEI----L-RGLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~ei----l-~~ll~~Dligf~t~~y~~~Fl~ 271 (780)
-|+|++|+++..+++.++++. .++|+.+.+|..+.... .++...+ . ..+-.||.|-..+...++.+.+
T Consensus 74 ~Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 74 PDVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp -SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred CeEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 499999998877777777744 38999999997543221 1222222 2 2344689999999877777654
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.45 E-value=0.24 Score=50.16 Aligned_cols=34 Identities=18% Similarity=0.096 Sum_probs=27.7
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|++ . .+++|+||.....++..+..+
T Consensus 71 pg~~e~L~~L~~-~-~~~~IvS~~~~~~~~~~l~~~ 104 (205)
T PRK13582 71 PGAVEFLDWLRE-R-FQVVILSDTFYEFAGPLMRQL 104 (205)
T ss_pred CCHHHHHHHHHh-c-CCEEEEeCCcHHHHHHHHHHc
Confidence 456678888887 3 789999999999998887764
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=90.43 E-value=25 Score=39.33 Aligned_cols=72 Identities=10% Similarity=0.003 Sum_probs=48.4
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC-C
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-G 490 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ 490 (780)
|. +.++++..++.++++.|+++|-.|- =++ .||.+.+. |+|. ...=.+.+. |
T Consensus 264 v~-l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg~-------------------Pvv~--l~~R~e~~~~g 316 (365)
T TIGR03568 264 FR-LFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFGV-------------------PTIN--IGTRQKGRLRA 316 (365)
T ss_pred EE-EECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcCC-------------------CEEe--ecCCchhhhhc
Confidence 55 4568999999999999999884431 122 79999864 3332 122222232 3
Q ss_pred -c-EEECCCCHHHHHHHHHHHHc
Q 003999 491 -A-IRVNPWDIDAVADAMTLAIN 511 (780)
Q Consensus 491 -a-l~VnP~d~~~~A~ai~~aL~ 511 (780)
. +.| +.|.+++.+++.++++
T Consensus 317 ~nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 317 DSVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred CeEEEe-CCCHHHHHHHHHHHhC
Confidence 3 447 7799999999999654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.35 E-value=0.39 Score=51.16 Aligned_cols=54 Identities=20% Similarity=0.337 Sum_probs=40.6
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcC---CChhhHHHHhcc
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG---RGRSSLSEWLAP 648 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~f~~ 648 (780)
+.+.+++|+||||.. ..++=+...++|++|++. |.+++++|- |++..+.+.+..
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L~~~-g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRLKAA-GKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHHHHc-CCeEEEEeCCCCCCHHHHHHHHHh
Confidence 346799999999997 334567899999999995 899999864 555545555543
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=90.25 E-value=0.37 Score=46.56 Aligned_cols=58 Identities=22% Similarity=0.219 Sum_probs=44.4
Q ss_pred cCceEEeCCCCCCCCCC--C----CCC-----------------CCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHh
Q 003999 590 ERRAIFLDYDGTVVPET--S----IIK-----------------SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL 646 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~--~----~~~-----------------~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f 646 (780)
++.++++|+||||+.-. + ... .+-+.+.+.|+.|.+ +..++|+|+.....++..+
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~--~~~l~I~Ts~~~~~~~~il 78 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASE--LFELVVFTAGLRMYADPVL 78 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHh--ccEEEEEeCCcHHHHHHHH
Confidence 36789999999999742 1 001 123678899999974 6899999999999998888
Q ss_pred ccC
Q 003999 647 APC 649 (780)
Q Consensus 647 ~~l 649 (780)
..+
T Consensus 79 ~~l 81 (148)
T smart00577 79 DLL 81 (148)
T ss_pred HHh
Confidence 754
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=90.08 E-value=0.68 Score=47.55 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=27.1
Q ss_pred HHHHHHHH-HhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 614 PEVISVLK-TLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 614 ~~~~~~L~-~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
+.+.+.|+ .+.+ .|..++|||+.....++.+...
T Consensus 97 pga~e~L~~~l~~-~G~~v~IvSas~~~~~~~ia~~ 131 (210)
T TIGR01545 97 PLVAERLRQYLES-SDADIWLITGSPQPLVEAVYFD 131 (210)
T ss_pred ccHHHHHHHHHHh-CCCEEEEEcCCcHHHHHHHHHh
Confidence 56777785 6666 4999999999999999888754
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=89.74 E-value=0.44 Score=48.81 Aligned_cols=35 Identities=20% Similarity=0.279 Sum_probs=27.8
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.|+.|++. |+.++|+||.....+...+..+
T Consensus 90 ~G~~~~L~~L~~~-g~~~~ivT~~~~~~~~~~l~~~ 124 (220)
T TIGR03351 90 PGAEEAFRSLRSS-GIKVALTTGFDRDTAERLLEKL 124 (220)
T ss_pred CCHHHHHHHHHHC-CCEEEEEeCCchHHHHHHHHHh
Confidence 3455778888874 8999999999999888877653
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=89.64 E-value=0.7 Score=46.60 Aligned_cols=36 Identities=14% Similarity=0.100 Sum_probs=29.7
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.+.|+.+.+. |.+|+|+||.....++.+...+
T Consensus 89 ~~~~~~~l~~l~~~-g~~v~ivS~s~~~~v~~~~~~l 124 (202)
T TIGR01490 89 YPEARDLIRWHKAE-GHTIVLVSASLTILVKPLARIL 124 (202)
T ss_pred cHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHHc
Confidence 45777888888884 8999999999998888887654
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.30 E-value=0.49 Score=48.66 Aligned_cols=34 Identities=15% Similarity=-0.008 Sum_probs=27.4
Q ss_pred HHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 615 EVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 615 ~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.++|+.|++. |.+++|+||.....++..++.+
T Consensus 96 g~~~~l~~l~~~-g~~~~i~S~~~~~~~~~~l~~~ 129 (222)
T PRK10826 96 GVREALALCKAQ-GLKIGLASASPLHMLEAVLTMF 129 (222)
T ss_pred CHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHHHhC
Confidence 466777888874 8999999999998888877654
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=89.25 E-value=42 Score=37.58 Aligned_cols=137 Identities=15% Similarity=0.167 Sum_probs=85.3
Q ss_pred CeEEEEecccccc-CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 003999 334 KKLILGIDDMDIF-KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (780)
Q Consensus 334 ~~vil~Vdrld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV 412 (780)
+-+++..-|-.-. +++...+.|+.++++++|+.. +| .|...+ +.++ +.+ +.+++.. ..|
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----vi---yp~H~~-~~v~-------e~~---~~~L~~~--~~v 264 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VI---YPVHPR-PRVR-------ELV---LKRLKNV--ERV 264 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EE---EeCCCC-hhhh-------HHH---HHHhCCC--CcE
Confidence 4566667776655 999999999999999998865 33 233212 3222 222 1222321 236
Q ss_pred EEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC-C-
Q 003999 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-G- 490 (780)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~- 490 (780)
.++. ++...+...|...|-+.+--| |=.--||-.-+. -++++=+.+.=++.+. |
T Consensus 265 ~li~-pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~------------------Pvl~lR~~TERPE~v~agt 320 (383)
T COG0381 265 KLID-PLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGK------------------PVLVLRDTTERPEGVEAGT 320 (383)
T ss_pred EEeC-CcchHHHHHHHHhceEEEecC-----CchhhhHHhcCC------------------cEEeeccCCCCccceecCc
Confidence 6665 889999999999996655444 223446555432 1344434444444443 4
Q ss_pred cEEECCCCHHHHHHHHHHHHcCCHH
Q 003999 491 AIRVNPWDIDAVADAMTLAINMRDS 515 (780)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~m~~~ 515 (780)
.++|++ |.+.+.+++.+++++++.
T Consensus 321 ~~lvg~-~~~~i~~~~~~ll~~~~~ 344 (383)
T COG0381 321 NILVGT-DEENILDAATELLEDEEF 344 (383)
T ss_pred eEEeCc-cHHHHHHHHHHHhhChHH
Confidence 456664 789999999999998753
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.21 E-value=0.34 Score=49.91 Aligned_cols=38 Identities=16% Similarity=0.104 Sum_probs=30.4
Q ss_pred CCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 611 SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 611 ~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+...+.++.+++ .|.+|+|+||-....++.....+
T Consensus 77 ~l~~ga~elv~~lk~-~G~~v~iiSgg~~~lv~~ia~~l 114 (212)
T COG0560 77 RLTPGAEELVAALKA-AGAKVVIISGGFTFLVEPIAERL 114 (212)
T ss_pred cCCccHHHHHHHHHH-CCCEEEEEcCChHHHHHHHHHHh
Confidence 345678889999998 49999999999887777666554
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=88.84 E-value=0.87 Score=52.72 Aligned_cols=47 Identities=15% Similarity=0.169 Sum_probs=36.8
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCc
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHG 659 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG 659 (780)
..+++++.|+++++. |.+++|+||.....++...+.+. ...+++.++
T Consensus 73 ~~pga~e~L~~lk~~-G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~ 120 (479)
T PRK08238 73 YNEEVLDYLRAERAA-GRKLVLATASDERLAQAVAAHLGLFDGVFASDG 120 (479)
T ss_pred CChhHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCC
Confidence 347899999999985 99999999999999988877653 134555554
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=88.73 E-value=0.79 Score=48.76 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=26.8
Q ss_pred HHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 615 EVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 615 ~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.++|+.|++. |..++|+|+.+...+...+..+
T Consensus 113 g~~e~L~~L~~~-g~~l~I~Tn~~~~~~~~~l~~~ 146 (260)
T PLN03243 113 GSREFVQALKKH-EIPIAVASTRPRRYLERAIEAV 146 (260)
T ss_pred CHHHHHHHHHHC-CCEEEEEeCcCHHHHHHHHHHc
Confidence 345678888874 8999999999998888777654
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.57 E-value=0.49 Score=48.47 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=28.1
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|++. |+.++|+||.....+..++..+
T Consensus 96 ~g~~~~l~~l~~~-g~~~~i~S~~~~~~~~~~l~~~ 130 (226)
T PRK13222 96 PGVKETLAALKAA-GYPLAVVTNKPTPFVAPLLEAL 130 (226)
T ss_pred CCHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHc
Confidence 4566778888774 8999999999999888888654
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=87.49 E-value=0.82 Score=50.16 Aligned_cols=50 Identities=18% Similarity=0.257 Sum_probs=35.8
Q ss_pred eEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccC---CCCEEEEEc---CCChhhHHHHh
Q 003999 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSD---PNNTVFIVS---GRGRSSLSEWL 646 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d---~g~~V~IvS---GR~~~~L~~~f 646 (780)
.++||+||||... ..+-+...++|+.|.+. .|..++++| |++.....+.+
T Consensus 2 ~~ifD~DGvL~~g----~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFRG----KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceECC----ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHH
Confidence 5899999999972 34578889999999872 166666665 66666654444
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.87 E-value=0.78 Score=47.49 Aligned_cols=35 Identities=23% Similarity=0.288 Sum_probs=28.8
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|.+. ++.++++|+.++..++..+...
T Consensus 89 pGv~~~l~~L~~~-~i~~avaS~s~~~~~~~~L~~~ 123 (221)
T COG0637 89 PGVVELLEQLKAR-GIPLAVASSSPRRAAERVLARL 123 (221)
T ss_pred ccHHHHHHHHHhc-CCcEEEecCChHHHHHHHHHHc
Confidence 5677889999985 7999999999988888877543
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.68 E-value=0.69 Score=47.99 Aligned_cols=35 Identities=17% Similarity=0.017 Sum_probs=26.8
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|++. |..++|+|+.+...+...+..+
T Consensus 98 pg~~~~L~~L~~~-g~~l~i~Tn~~~~~~~~~l~~~ 132 (229)
T PRK13226 98 DGVEGMLQRLECA-GCVWGIVTNKPEYLARLILPQL 132 (229)
T ss_pred CCHHHHHHHHHHC-CCeEEEECCCCHHHHHHHHHHc
Confidence 3455788888874 8999999999988777666543
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=86.65 E-value=0.93 Score=44.25 Aligned_cols=56 Identities=18% Similarity=0.375 Sum_probs=41.0
Q ss_pred eEEeCCCCCCCCCC------CC--CCCCCHHHHHHHHHhccCCCCEEEEEcCCChh---hHHHHhccC
Q 003999 593 AIFLDYDGTVVPET------SI--IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRS---SLSEWLAPC 649 (780)
Q Consensus 593 lI~lD~DGTL~~~~------~~--~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~---~L~~~f~~l 649 (780)
+|++|+|||++... +. ....-+.+.++.+++.++ |.+++=+|+|+.. ....|+...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~-GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADN-GYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHC-CeEEEEECcCcHHHHHHHHHHHHHH
Confidence 48999999999842 00 113346788999999985 9999999999965 355677643
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=85.56 E-value=4.3 Score=43.58 Aligned_cols=92 Identities=11% Similarity=0.084 Sum_probs=58.0
Q ss_pred CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 003999 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV 412 (780)
.+++++..|-.|+.+.....++|+.++ .++++ +..|.++.. +.++ ++++.++. .+ .|
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~----i~vv~G~~~---~~~~----~l~~~~~~----~~-----~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS----ITLVTGSSN---PNLD----ELKKFAKE----YP-----NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce----EEEEECCCC---cCHH----HHHHHHHh----CC-----CE
Confidence 367999999999988666777777653 23333 333443331 2223 33344322 11 24
Q ss_pred EEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhccc
Q 003999 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQ 455 (780)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~ 455 (780)
.++ + ..+++..+++.||++|.. -|.+.+|+++|+.
T Consensus 227 ~~~-~--~~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~ 261 (279)
T TIGR03590 227 ILF-I--DVENMAELMNEADLAIGA-----AGSTSWERCCLGL 261 (279)
T ss_pred EEE-e--CHHHHHHHHHHCCEEEEC-----CchHHHHHHHcCC
Confidence 433 3 346899999999998874 3589999999975
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=85.43 E-value=0.68 Score=47.33 Aligned_cols=36 Identities=14% Similarity=0.021 Sum_probs=29.6
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.+.|+.|++. + +++|+||-....++.+...+
T Consensus 69 l~pga~ell~~lk~~-~-~~~IVS~~~~~~~~~il~~l 104 (203)
T TIGR02137 69 PLEGAVEFVDWLRER-F-QVVILSDTFYEFSQPLMRQL 104 (203)
T ss_pred CCccHHHHHHHHHhC-C-eEEEEeCChHHHHHHHHHHc
Confidence 456788889998884 4 99999999999888887765
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=84.76 E-value=1.1 Score=50.53 Aligned_cols=33 Identities=18% Similarity=0.270 Sum_probs=26.5
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~ 647 (780)
+.+.++|+.|.+. |++++|+|+.+...+...+.
T Consensus 96 pGv~elL~~Lk~~-g~~l~IvTn~~~~~~~~~l~ 128 (382)
T PLN02940 96 PGANRLIKHLKSH-GVPMALASNSPRANIEAKIS 128 (382)
T ss_pred cCHHHHHHHHHHC-CCcEEEEeCCcHHHHHHHHH
Confidence 3455688888884 99999999999988877664
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=84.64 E-value=1.1 Score=50.11 Aligned_cols=35 Identities=17% Similarity=0.180 Sum_probs=28.6
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|.+. |++++|+|++++..++..++.+
T Consensus 219 pGa~ElL~~Lk~~-GiklaIaSn~~~~~~~~~L~~l 253 (381)
T PLN02575 219 TGSQEFVNVLMNY-KIPMALVSTRPRKTLENAIGSI 253 (381)
T ss_pred cCHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHc
Confidence 3455688888885 9999999999999998888754
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=84.58 E-value=1.1 Score=44.40 Aligned_cols=58 Identities=21% Similarity=0.153 Sum_probs=36.0
Q ss_pred CceEEeCCCCCCCCCCCCCC----------------------CCCHHHHHHHHHhccCCCCEEEEEcCC-ChhhHHHHhc
Q 003999 591 RRAIFLDYDGTVVPETSIIK----------------------SPGPEVISVLKTLCSDPNNTVFIVSGR-GRSSLSEWLA 647 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~----------------------~ps~~~~~~L~~L~~d~g~~V~IvSGR-~~~~L~~~f~ 647 (780)
.+||+||+|+||.+.--... ..-+.+..+|+.|.. .|++++++|=- .++...+.++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~-~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKE-RGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHH-CT--EEEEE--S-HHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHH-CCCEEEEEECCCChHHHHHHHH
Confidence 47999999999998531100 112678899999999 59999999954 4556666666
Q ss_pred cC
Q 003999 648 PC 649 (780)
Q Consensus 648 ~l 649 (780)
.+
T Consensus 82 ~l 83 (169)
T PF12689_consen 82 LL 83 (169)
T ss_dssp HT
T ss_pred hc
Confidence 54
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=83.06 E-value=3.8 Score=43.64 Aligned_cols=59 Identities=19% Similarity=0.268 Sum_probs=45.9
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
...+|++|+|.||........-+.+.+.+.|.+|++. |..+++=|--+.+-+..-+..+
T Consensus 121 ~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~-g~vLvLWSyG~~eHV~~sl~~~ 179 (297)
T PF05152_consen 121 PPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQ-GCVLVLWSYGNREHVRHSLKEL 179 (297)
T ss_pred CCcEEEEECCCcccccCCccccCChHHHHHHHHHHHc-CCEEEEecCCCHHHHHHHHHHh
Confidence 3459999999999985433344679999999999995 8788888888888777766553
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=82.67 E-value=1.4 Score=43.69 Aligned_cols=58 Identities=7% Similarity=0.050 Sum_probs=38.1
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC---Cce--EEecCccEEeeCCCCceEec
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE---MLG--IAAEHGYFIRWNKTSEWETN 673 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~---~lg--liaenG~~ir~~~~~~w~~~ 673 (780)
.|..++......++ ++.|+|+||-....+...|.++- .+. =|..|-.++... ..|...
T Consensus 75 dp~fKef~e~ike~-di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~d--g~h~i~ 137 (220)
T COG4359 75 DPGFKEFVEWIKEH-DIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHID--GQHSIK 137 (220)
T ss_pred CccHHHHHHHHHHc-CCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCC--Cceeee
Confidence 44555666667774 89999999999999988887652 121 234566666654 357643
|
|
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=82.59 E-value=25 Score=39.40 Aligned_cols=96 Identities=15% Similarity=0.124 Sum_probs=59.1
Q ss_pred ecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc----ccC--
Q 003999 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS----PSL-- 488 (780)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l-- 488 (780)
+.+.++.. .++..||++|. +-|.| +..|++++|. |+|+--..+-. ..+
T Consensus 279 ~~~~~p~~---~ll~~~~~~I~---hgG~~-t~~Eal~~G~-------------------P~v~~p~~~dq~~~a~~l~~ 332 (392)
T TIGR01426 279 VRQWVPQL---EILKKADAFIT---HGGMN-STMEALFNGV-------------------PMVAVPQGADQPMTARRIAE 332 (392)
T ss_pred EeCCCCHH---HHHhhCCEEEE---CCCch-HHHHHHHhCC-------------------CEEecCCcccHHHHHHHHHH
Confidence 44567764 56789998885 44766 6699999975 44443222211 112
Q ss_pred CC-cEEECC--CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh-CCHHHHHH
Q 003999 489 SG-AIRVNP--WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWAR 538 (780)
Q Consensus 489 ~~-al~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~ 538 (780)
.| |+.++. .+.++++++|.++|..+ +.+.+.+++.+.+.. ......++
T Consensus 333 ~g~g~~l~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa~ 384 (392)
T TIGR01426 333 LGLGRHLPPEEVTAEKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAAD 384 (392)
T ss_pred CCCEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHHH
Confidence 13 555654 56899999999999865 345555565555544 34444444
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=82.27 E-value=2 Score=43.63 Aligned_cols=58 Identities=16% Similarity=0.168 Sum_probs=42.4
Q ss_pred ccCceEEeCCCCCCCCCCCCCCC----CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 589 TERRAIFLDYDGTVVPETSIIKS----PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~~~~----ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
.++++++||+||||+...+.... .-|.+.+.|+.+.+ .-.|+|=|..+...++..+..
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~--~feIvVwTAa~~~ya~~~l~~ 80 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE--DYDIVIWSATSMKWIEIKMTE 80 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh--CCEEEEEecCCHHHHHHHHHH
Confidence 56789999999999974321111 13568888988887 478899898888877776653
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=81.97 E-value=14 Score=40.62 Aligned_cols=139 Identities=19% Similarity=0.198 Sum_probs=83.4
Q ss_pred eEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 003999 335 KLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVL 414 (780)
Q Consensus 335 ~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~ 414 (780)
+|+|| -.-|++-+....|+++.+.+. .+ +.++ . |- +-|...+++.++|.+.+.++ ||.. .+..
T Consensus 187 tILvG-NSgd~sNnHieaL~~L~~~~~--~~----~kIi--v-PL-sYg~~n~~Yi~~V~~~~~~l---F~~~---~~~i 249 (360)
T PF07429_consen 187 TILVG-NSGDPSNNHIEALEALKQQFG--DD----VKII--V-PL-SYGANNQAYIQQVIQAGKEL---FGAE---NFQI 249 (360)
T ss_pred EEEEc-CCCCCCccHHHHHHHHHHhcC--CC----eEEE--E-EC-CCCCchHHHHHHHHHHHHHh---cCcc---ceeE
Confidence 34443 446777777766666554321 12 2222 1 21 22222456666776666554 5532 3556
Q ss_pred ecCCCCHHHHHHHHHhcceeeeccCC-cCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-CCcE
Q 003999 415 IDRPVPRFEKSAYYAVAECCIVNAVR-DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAI 492 (780)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~r-EGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al 492 (780)
++..+|.+|+.++++.+|+.++...| .|||...+ .+.+ +.++++|+-.-....+ ..++
T Consensus 250 L~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~-------------------G~~v~L~~~np~~~~l~~~~i 309 (360)
T PF07429_consen 250 LTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL-------------------GKKVFLSRDNPFWQDLKEQGI 309 (360)
T ss_pred hhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc-------------------CCeEEEecCChHHHHHHhCCC
Confidence 77899999999999999999999985 89997764 2333 3588898877666666 3343
Q ss_pred EE----CCCCHHHHHHHHHHHH
Q 003999 493 RV----NPWDIDAVADAMTLAI 510 (780)
Q Consensus 493 ~V----nP~d~~~~A~ai~~aL 510 (780)
.| +.-|...+++|=+++.
T Consensus 310 pVlf~~d~L~~~~v~ea~rql~ 331 (360)
T PF07429_consen 310 PVLFYGDELDEALVREAQRQLA 331 (360)
T ss_pred eEEeccccCCHHHHHHHHHHHh
Confidence 32 3444555555544333
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=81.94 E-value=0.98 Score=43.87 Aligned_cols=56 Identities=23% Similarity=0.267 Sum_probs=38.3
Q ss_pred ceEEeCCCCCCCCCCCCCCC----------------CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 592 RAIFLDYDGTVVPETSIIKS----------------PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~----------------ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
++++||+||||+........ .-|.+.+.|+.|.+ ...|+|.|..+.......+..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~--~~ev~i~T~~~~~ya~~v~~~l 72 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSK--HYEVVIWTSASEEYAEPVLDAL 72 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHH--HCEEEEE-SS-HHHHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHH--hceEEEEEeehhhhhhHHHHhh
Confidence 58999999999974422110 23678888888865 5889999999988887777654
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=81.54 E-value=54 Score=36.60 Aligned_cols=86 Identities=16% Similarity=0.119 Sum_probs=55.6
Q ss_pred HHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcccc------C---CCcE
Q 003999 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS------L---SGAI 492 (780)
Q Consensus 422 ~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~------l---~~al 492 (780)
+++.++|+.||++|.=| | ++++.|..++|.+ ..+|=...+--..+ + ..|+
T Consensus 244 ~dm~~~~~~ADLvIsRa---G-a~Ti~E~~a~g~P-----------------~IliP~p~~~~~~Q~~NA~~l~~~gaa~ 302 (357)
T COG0707 244 DDMAALLAAADLVISRA---G-ALTIAELLALGVP-----------------AILVPYPPGADGHQEYNAKFLEKAGAAL 302 (357)
T ss_pred hhHHHHHHhccEEEeCC---c-ccHHHHHHHhCCC-----------------EEEeCCCCCccchHHHHHHHHHhCCCEE
Confidence 46999999999988644 2 5788999999852 23332222200111 2 2367
Q ss_pred EECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 493 RVNPWD--IDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 493 ~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
.+.-++ .+.+++.|.++++.+ |+..+|....+.+..
T Consensus 303 ~i~~~~lt~~~l~~~i~~l~~~~--~~l~~m~~~a~~~~~ 340 (357)
T COG0707 303 VIRQSELTPEKLAELILRLLSNP--EKLKAMAENAKKLGK 340 (357)
T ss_pred EeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHhcCC
Confidence 776666 899999999999874 455556555554433
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=81.48 E-value=0.61 Score=46.99 Aligned_cols=28 Identities=25% Similarity=0.474 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChh
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRS 640 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~ 640 (780)
|-+.+.++|++|.+. |..++++|+|+..
T Consensus 74 p~~gA~e~l~~L~~~-g~~~~~Itar~~~ 101 (191)
T PF06941_consen 74 PIPGAVEALKKLRDK-GHEIVIITARPPE 101 (191)
T ss_dssp B-TTHHHHHHHHHTS-TTEEEEEEE-SSS
T ss_pred ccHHHHHHHHHHHHc-CCcEEEEEecCcc
Confidence 446788999999984 7778888888754
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.33 E-value=1.4 Score=44.08 Aligned_cols=45 Identities=29% Similarity=0.426 Sum_probs=35.4
Q ss_pred CceEEeCCCCCCCCCCC-CC-----CCCCHHHHHHHHHhccCCCCEEEEEcC
Q 003999 591 RRAIFLDYDGTVVPETS-II-----KSPGPEVISVLKTLCSDPNNTVFIVSG 636 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~-~~-----~~ps~~~~~~L~~L~~d~g~~V~IvSG 636 (780)
.++||+|-||||--..+ .. -..-+.++.+|.+|.+ .|.+++|+|-
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~-~gy~lVvvTN 55 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQR-AGYKLVVVTN 55 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHh-CCCeEEEEEC
Confidence 57999999999986443 21 2344789999999998 5999999985
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=80.87 E-value=3.9 Score=46.42 Aligned_cols=76 Identities=16% Similarity=0.151 Sum_probs=58.3
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCC-------CCC------CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHH
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPET-------SII------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSE 644 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~-------~~~------~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~ 644 (780)
++..++.|-.....|.++||+|+||..-. .++ ..+-.+..+.+..|.+. |+..+|+|=.......+
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kq-GVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQ-GVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhc-cEEEEEecCCchhhHHH
Confidence 56677778778889999999999998631 011 12225677888899985 99999999999999999
Q ss_pred HhccCCCceE
Q 003999 645 WLAPCEMLGI 654 (780)
Q Consensus 645 ~f~~l~~lgl 654 (780)
.|..-|.+-+
T Consensus 288 vF~khp~MiL 297 (574)
T COG3882 288 VFRKHPDMIL 297 (574)
T ss_pred HHhhCCCeEe
Confidence 9987666533
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=80.82 E-value=2.1 Score=44.71 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHhcc-CCCCEEEEEcCCChhhHHHHhcc
Q 003999 612 PGPEVISVLKTLCS-DPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 612 ps~~~~~~L~~L~~-d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
+.+.++++++.+.+ ..+..++|+|--.--.++.|+..
T Consensus 72 ~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~ 109 (234)
T PF06888_consen 72 IDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH 109 (234)
T ss_pred CCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh
Confidence 45677888888843 24888999999998899998875
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=80.57 E-value=0.93 Score=48.91 Aligned_cols=27 Identities=30% Similarity=0.421 Sum_probs=21.4
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCC
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVP 604 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~ 604 (780)
+...+.++--+++.++|+||+||||++
T Consensus 27 ~~~~~~~~~~~~~~k~VIFDlDGTLvD 53 (286)
T PLN02779 27 STARVASASASALPEALLFDCDGVLVE 53 (286)
T ss_pred hhhhhhhhccccCCcEEEEeCceeEEc
Confidence 455566665666778999999999999
|
|
| >COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B | Back alignment and domain information |
|---|
Probab=80.42 E-value=9.6 Score=36.60 Aligned_cols=72 Identities=21% Similarity=0.223 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHh
Q 003999 351 LKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAV 430 (780)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ 430 (780)
.-+.+...+++++ +++.|.||.|-.-+|.... ..+.+++.++++..+|+ .||++.+...+..+-.+.+..
T Consensus 40 ~~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~----lpv~l~DERltTv~A~~~L~~ 109 (141)
T COG0816 40 QDFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFN----LPVVLWDERLSTVEAERMLIE 109 (141)
T ss_pred hhHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcC----CCEEEEcCccCHHHHHHHHHH
Confidence 3455566666655 3557789999877766655 56678999999999998 489999988887777766666
Q ss_pred cc
Q 003999 431 AE 432 (780)
Q Consensus 431 AD 432 (780)
++
T Consensus 110 ~~ 111 (141)
T COG0816 110 AG 111 (141)
T ss_pred cC
Confidence 54
|
subtilis) [DNA replication, recombination, and repair] |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 780 | ||||
| 2wtx_A | 474 | Insight Into The Mechanism Of Enzymatic Glycosyltra | 1e-52 | ||
| 1uqu_A | 482 | Trehalose-6-Phosphate From E. Coli Bound With Udp-G | 1e-52 | ||
| 1gz5_A | 456 | Trehalose-6-Phosphate Synthase. Otsa Length = 456 | 3e-51 | ||
| 3t5t_A | 496 | Vall From Streptomyces Hygroscopicus In Apo Form Le | 4e-15 | ||
| 4f96_B | 497 | Crystal Structure Of Vlde, The Pseudo-Glycosyltrans | 4e-15 | ||
| 3t7d_A | 497 | Vall From Streptomyces Hygroscopicus In Complex Wit | 1e-13 |
| >pdb|2WTX|A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase Length = 474 | Back alignment and structure |
|
| >pdb|1UQU|A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. Length = 482 | Back alignment and structure |
|
| >pdb|1GZ5|A Chain A, Trehalose-6-Phosphate Synthase. Otsa Length = 456 | Back alignment and structure |
|
| >pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form Length = 496 | Back alignment and structure |
|
| >pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase, In Complex With Gdp Length = 497 | Back alignment and structure |
|
| >pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With Trehalose Length = 497 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Length = 482 | Back alignment and structure |
|---|
Score = 627 bits (1620), Expect = 0.0
Identities = 130/527 (24%), Positives = 234/527 (44%), Gaps = 47/527 (8%)
Query: 60 RKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQ 119
R ++V+N + + G + G ++ G + +E
Sbjct: 3 RLVVVSNRIAPPDEHAASAGGLAVGIL----------GALKAAGGLWFGW--SGETGNED 50
Query: 120 EEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQA 179
+ + + + L ++Y F LWP FHY L + +F R W
Sbjct: 51 QPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWDG 105
Query: 180 YVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY 239
Y+ N + ADK++ ++ DD +W+HDYHL+ LRKR ++GFFLH PFP+ EI+
Sbjct: 106 YLRVNALLADKLLPLLQDDD-IIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIF 164
Query: 240 RTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 299
LP D +L L + DL+GF T + FL C S + + S + H +G+
Sbjct: 165 NALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFRT 221
Query: 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQL 359
++ P+G+ + P K+ +++ + + I ++ +D KG+ + LA E L
Sbjct: 222 EVYPIGIEPKEIAKQAAGPLPP-KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEAL 280
Query: 360 LQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419
L+++P GK+ QI +RG + Q+ + + A RIN YG + P+ +++
Sbjct: 281 LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHF 340
Query: 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479
R + ++ +V +RDGMNLV +Y+ + + +LV+S
Sbjct: 341 DRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPA--------------NPGVLVLS 386
Query: 480 EFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539
+F G + L+ A+ VNP+D D VA A+ A+ M +E+ RH + + +D+ +W
Sbjct: 387 QFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQEC 446
Query: 540 FAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAY 586
F DL++ + +F +L+++H +
Sbjct: 447 FISDLKQIVPRSAES-----------QQRDKVATFPKLALEHHHHHH 482
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 3t7d_A* Length = 496 | Back alignment and structure |
|---|
Score = 574 bits (1482), Expect = 0.0
Identities = 92/510 (18%), Positives = 177/510 (34%), Gaps = 40/510 (7%)
Query: 57 SRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADID- 115
+ + + + D TG L + + + ++ S ++ D
Sbjct: 1 TGSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVV-AEQAGVLNISWIASADSEDDR 59
Query: 116 --ASEQEEVAQKLLDDFNCVPTFL---PHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGD 170
++ + L + L + + +W +Y
Sbjct: 60 RASALNPDGVTMELHSGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSF 119
Query: 171 -RFDRVLWQAYVSANKIFADKVMEVINP-DDDCVWVHDYHLMVLPTFLRKRFNRIKLGFF 228
R W + + FAD +++ D VHDY L+ +P LR++ + F
Sbjct: 120 GSDAREGWADFGRFTRDFADAILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLF 179
Query: 229 LHSPFPSSEIYRTLP--VRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRG 286
+H P+PS++ +R LP +R IL G+L IGF + R+FL + +L D R
Sbjct: 180 VHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLP-DARIDRE 238
Query: 287 HIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIF 346
+ +++ G ++ +P+G L+ + IE+ DG +L++ D
Sbjct: 239 AMTVEWRGHRTRLRTMPLGYSPLTLDG-----RNPQLPEGIEEWADGHRLVVHSGRTDPI 293
Query: 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGS 406
K + A +L G K ++ +NP R + N GS
Sbjct: 294 KNAERAVRAF--VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGS 351
Query: 407 PNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGR 466
V ID A + A+ I N+ DG NL ++ + +
Sbjct: 352 ----DTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNER---------- 397
Query: 467 ERDSPHTSMLVVSEFIGCSPSLSGAIR-VNPWDIDAVADAMTLAINMRDSEKQLRHEKHY 525
+ +++SE G + L R VNP+D+ A+A++ A+ ++ +
Sbjct: 398 ------DADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRR 451
Query: 526 RYVSTHDVAYWARSFAQDLERACRDHYSKR 555
+ W ++ L +
Sbjct: 452 DAARPWTLEAWVQAQLDGLAADHAARTATA 481
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 Length = 239 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 7e-46
Identities = 35/164 (21%), Positives = 60/164 (36%), Gaps = 11/164 (6%)
Query: 593 AIFLDYDGTVVP--ETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE 650
IFLDYDGT+VP ++S++ L +IV+GR +S +L
Sbjct: 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDL--KERFDTYIVTGRSPEEISRFLPLD- 59
Query: 651 MLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVW 710
+ + HG + N + L + RS+ G I K A+++
Sbjct: 60 -INMICYHGACSKINGQIVYNNGS-DRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLY 117
Query: 711 HHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQ 754
H D +L +E + G+ I+E++
Sbjct: 118 HLGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRVP 157
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.9 bits (139), Expect = 1e-08
Identities = 100/653 (15%), Positives = 192/653 (29%), Gaps = 203/653 (31%)
Query: 113 DIDASEQEEVAQKLL--------DDFNC--VPTFLPHDLQKKFYLGFCKQHLWPLFHYML 162
D + E + + +L D+F+C V L K+ H+
Sbjct: 8 DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI-----DHII------- 55
Query: 163 PMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFN- 221
M D R+ W ++ V EV+ + + P+ + + +
Sbjct: 56 -MSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE 114
Query: 222 -RIKLGFFLHSPFPSSEIYRTLPVRD--EILRGLLNCDLIGFHTFDYARHFLSCCSRMLG 278
R +L + + F + R P + L L + +LG
Sbjct: 115 QRDRL-YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG-------------VLG 160
Query: 279 LDYESKRGHIGLDYFGRTV----------YIKILPVGVH---MGRLESVLNLPATATKIK 325
G+T + + + S +
Sbjct: 161 --------------SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV-------- 198
Query: 326 EIEKQFDGKKLILGIDDM-----DIFKGISLKLLAMEQ----LLQQHPGMRGKVVLVQIV 376
+E +KL+ ID D I L++ +++ LL+ P +VL
Sbjct: 199 -LEML---QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL---- 250
Query: 377 NPARGSGKDVQEAK---------KETYLTA--KRINEVYGSPNYEPVVLIDRPVPRFEKS 425
+VQ AK K LT K++ + + + L +
Sbjct: 251 -------LNVQNAKAWNAFNLSCK-ILLTTRFKQVTDFLSAATTTHISLDHHSMT-LTPD 301
Query: 426 AYYAV-------------AECCIVN---------AVRDGMNLV-PYKYIVCRQGTPIMD- 461
++ E N ++RDG+ +K++ C + T I++
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES 361
Query: 462 --EALGRERDSPHTSMLVVSEF-----IGCSPS--LSGAIRVNPWDIDAVADAMTLAINM 512
L L V F I P+ LS + W +D M + +
Sbjct: 362 SLNVLEPAEYRKMFDRLSV--FPPSAHI---PTILLS---LI--WFDVIKSDVMVVVNKL 411
Query: 513 RDSEKQLRHEKHYRYVSTHDVAYWARSFAQD---LERACRDHYSKRCWGIGLGLGFRVLS 569
+ K S + + ++ L R+ DHY+ F
Sbjct: 412 HKYSLVEKQPKESTI-SIPSIYLELKVKLENEYALHRSIVDHYNIPK-------TFDSDD 463
Query: 570 LSPSFRRLSID-----HIVSAY-----RKTER----RAIFLDY---DGTVVPETSIIKSP 612
L P +D HI + ER R +FLD+ + + +++ +
Sbjct: 464 LIP----PYLDQYFYSHI--GHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNAS 517
Query: 613 GP--EVISVLKT----LC-SDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEH 658
G + LK +C +DP + +++ ++L E I +++
Sbjct: 518 GSILNTLQQLKFYKPYICDNDPKYERLV------NAILDFLPKIEENLICSKY 564
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.6 bits (138), Expect = 2e-08
Identities = 60/345 (17%), Positives = 112/345 (32%), Gaps = 83/345 (24%)
Query: 109 SLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLP-MCPD 167
SL +EV LL +C P LP ++ + P ++ D
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV--------LTTN--PRRLSIIAESIRD 339
Query: 168 HGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGF 227
+D W+ + DK+ +I + + V + P RK F+R+ +
Sbjct: 340 GLATWDN--WK------HVNCDKLTTII---ESSLNVLE------PAEYRKMFDRLSV-- 380
Query: 228 FLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGH 287
FP S + +L L+ D+I L ++ + K
Sbjct: 381 -----FPPS-----AHIPTILL-SLIWFDVIKSDVMVVVNK---LHKYSL-VEKQPKEST 425
Query: 288 IGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKE---IEKQFDGKKLILGIDDMD 344
I + +++ + N A I + I K FD LI D
Sbjct: 426 ISIP-------------SIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY 472
Query: 345 IFKGIS--LKLLAMEQLLQQHPG-------MRGKVVLVQIVNPARGSGKD-VQEAKK-ET 393
+ I LK + + + + K+ A GS + +Q+ K +
Sbjct: 473 FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKP 532
Query: 394 YLTAKRINEVYGSPNYEPVV--LIDRPVPRFEKSAYYAVAECCIV 436
Y+ P YE +V ++D +P+ E++ + ++
Sbjct: 533 YICDN-------DPKYERLVNAILDF-LPKIEENLICS-KYTDLL 568
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* Length = 262 | Back alignment and structure |
|---|
Score = 49.6 bits (117), Expect = 1e-06
Identities = 31/193 (16%), Positives = 66/193 (34%), Gaps = 28/193 (14%)
Query: 585 AYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSE 644
A R+ ER D DGT+ P I PEV + L+ L S + +V G ++E
Sbjct: 7 AARRKERVLCLFDVDGTLTPARQKID---PEVAAFLQKLRS--RVQIGVVGGSDYCKIAE 61
Query: 645 WLAPCEMLGIAAEHGYF----IRWNKTSEWETNHLGADL---EWKKIVEPVMR----SYT 693
L + + ++ + +++ + L + ++ +
Sbjct: 62 QLGDGDEVIEKFDYVFAENGTVQYKHGRLLSKQTIQNHLGEELLQDLINFCLSYMALLRL 121
Query: 694 EATDGSNIEIKESALVWHH-----------QDADPDFGSCQAKELLDHLESVLAN-EPAV 741
G+ IE + L + ++ D ++ ++ L++ A
Sbjct: 122 PKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREKFVEALKTEFAGKGLRF 181
Query: 742 VKRGQHIVEVKPQ 754
+ G +V P+
Sbjct: 182 SRGGMISFDVFPE 194
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} PDB: 2i54_A* 2i55_A* Length = 246 | Back alignment and structure |
|---|
Score = 42.6 bits (99), Expect = 2e-04
Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 15/182 (8%)
Query: 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649
+R + D DGT+ P E+ +++K V V G + E L
Sbjct: 3 KRVLLLFDVDGTLTPPRLCQT---DEMRALIKRA-RGAGFCVGTVGGSDFAKQVEQLGRD 58
Query: 650 EM---LGIAAEHGYFIRWNKTSEWETN---HLGADLEWKKIVEPVMR----SYTEATDGS 699
+ + AE+G N + LG D K V+ +R G+
Sbjct: 59 VLTQFDYVFAENGLLAYRNGLEIHRQSLLNALGND-RIVKFVKKTLRLIADLDIPVQRGT 117
Query: 700 NIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPS 759
+E + + + E+ D+ V A+ A ++ +K +
Sbjct: 118 FVEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIAELENSFPDFGLKYSIGGQI 177
Query: 760 SI 761
S
Sbjct: 178 SF 179
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 780 | |||
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 100.0 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.94 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.91 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.9 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.9 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 99.9 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.9 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 99.9 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 99.9 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 99.89 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.89 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.89 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 99.88 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.88 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.83 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.82 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.81 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.77 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.76 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.71 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.71 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.7 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.69 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 99.68 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.68 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.68 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.67 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.65 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.64 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.64 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.63 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.63 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.63 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.62 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.62 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.62 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.6 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.6 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.6 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.59 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.57 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.55 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.55 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.55 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.54 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.53 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.52 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.52 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.5 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.5 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.47 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.41 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.39 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.27 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.17 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 98.7 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 98.67 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.47 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 98.22 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 98.15 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 98.07 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 98.06 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 98.04 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 98.01 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.89 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 97.84 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.83 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.83 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 97.76 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 97.69 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 97.64 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.63 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 97.51 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 97.43 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.41 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 97.37 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 97.36 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 97.33 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 97.18 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.16 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 97.15 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 97.08 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 97.04 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 97.01 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.98 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 96.92 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.91 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.9 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 96.83 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 96.73 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 96.66 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 96.55 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 96.55 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 96.53 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 96.48 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 96.42 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.29 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.27 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.22 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 96.22 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 96.16 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 95.93 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.81 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 95.72 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 95.58 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 95.53 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 95.49 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 95.38 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 95.29 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 95.23 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.16 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 95.12 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 94.94 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 94.82 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 94.44 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 94.28 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 94.19 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 94.17 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 94.13 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 94.01 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 93.94 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 93.92 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 93.78 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 93.56 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 93.32 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 93.18 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 93.12 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 93.01 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 92.81 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 92.75 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 92.72 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 92.65 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 92.19 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 92.18 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 91.97 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 91.59 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 91.47 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 91.14 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 90.52 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 90.42 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 90.32 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 90.24 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 90.18 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 89.47 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 89.17 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 89.09 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 89.01 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 88.8 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 88.34 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 88.18 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 88.15 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 88.05 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 87.76 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 87.52 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 87.21 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 87.04 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 86.89 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 86.58 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 86.48 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 86.29 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 86.24 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 86.22 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 85.92 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 85.87 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 85.83 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 85.2 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 85.18 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 85.04 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 84.93 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 84.25 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 84.02 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 83.8 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 83.78 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 83.71 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 83.61 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 83.42 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 83.11 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 82.77 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 82.36 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 82.08 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 81.75 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 80.85 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 80.07 |
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-108 Score=929.05 Aligned_cols=456 Identities=19% Similarity=0.270 Sum_probs=406.1
Q ss_pred CCcEEEEECCCccceeecCCCCcE---EEEecCChhHHhhhhcccCCCCeEEEEccCCCCChhHHHHHHH---------h
Q 003999 58 RERKIIVANMLPLHAKRDTETGRW---CFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQ---------K 125 (780)
Q Consensus 58 ~~r~iivsnrlP~~~~~~~~~~~~---~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~~~~~v~~---------~ 125 (780)
+.++||||||||+.+++++++|+| .++.++|||+++|.+-+ +++||||++.+.+ ++.+.+ .
T Consensus 2 ~~~livvsnR~P~~~~~~~~~g~~~~~~~~~s~GGLv~al~~~~----~~~Wvgw~~~~~~---~~~~~~~~~~~~~~~~ 74 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVL----NISWIASADSEDD---RRASALNPDGVTMELH 74 (496)
T ss_dssp --CEEEEESCCCEEEEECTTTCSEEEEECSSHHHHHHHHHHHHH----TCCEEEECCSHHH---HHHHHHCTTCEEEECT
T ss_pred CCCEEEEECCCCeeEEEecCCCceeeeeeccCCCchHHHHhhhc----CCEEEecCCCccc---hhhhhccccccccccc
Confidence 468999999999999987446887 67778999999997544 7899999986422 222221 1
Q ss_pred hccCccEEEeecChHhhhhHhhccccccccccccccCCC--CCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCC-CCCEE
Q 003999 126 LLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPM--CPDHGDRFDRVLWQAYVSANKIFADKVMEVINP-DDDCV 202 (780)
Q Consensus 126 l~~~~~~~pv~l~~~~~~~~y~gf~~~~LWpl~H~~~~~--~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~-~~DiV 202 (780)
..++|+|+||||+++++++||+||||++|||+|||+.+. .|+. .+|+++.|++|++||++||++|++.+++ ++|+|
T Consensus 75 ~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~~p~~-~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~V 153 (496)
T 3t5t_A 75 SGREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWTQPSF-GSDAREGWADFGRFTRDFADAILKSSAQSADPVY 153 (496)
T ss_dssp TSCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSSCCCB-CHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEE
T ss_pred cCCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCCCCcc-chhhHHHHHHHHHHHHHHHHHHHHHhccCCCCEE
Confidence 256899999999999999999999999999999998533 3332 3566789999999999999999999952 46999
Q ss_pred EEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCC--ChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhh-Cc
Q 003999 203 WVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLP--VRDEILRGLLNCDLIGFHTFDYARHFLSCCSRML-GL 279 (780)
Q Consensus 203 wvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp--~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l-~~ 279 (780)
||||||||+||+|||+++|+++||||||||||++|+|++|| ||++||+|||+||+|||||++|++||++||+|++ |+
T Consensus 154 wVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~ 233 (496)
T 3t5t_A 154 LVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDA 233 (496)
T ss_dssp EEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTC
T ss_pred EEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999 7999999999999999999999999999999999 98
Q ss_pred eeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHH
Q 003999 280 DYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQL 359 (780)
Q Consensus 280 ~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~l 359 (780)
++....+ +++++|++++|.++|+|||++.|.+... ++ .+++|++++++++||+|||+|+.|||..+|+|| +|
T Consensus 234 ~~~~~~~--~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~l 305 (496)
T 3t5t_A 234 RIDREAM--TVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VL 305 (496)
T ss_dssp EEETTTT--EEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HH
T ss_pred cccccCC--eEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHhCCceEEEEcccCccccCHHHHHHHH-HH
Confidence 8765554 5889999999999999999999987543 11 156888899999999999999999999999999 99
Q ss_pred HHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccC
Q 003999 360 LQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAV 439 (780)
Q Consensus 360 l~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~ 439 (780)
++++|+++ +++|||||.|+|+++++|+++++++++++++||.+||+. ||+|+ +.++.+++.++|++|||||+||+
T Consensus 306 l~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~-g~v~~~el~aly~~ADv~vv~Sl 380 (496)
T 3t5t_A 306 AARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRID-NDNDVNHTIACFRRADLLIFNST 380 (496)
T ss_dssp HHHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEE-ECCCHHHHHHHHHHCSEEEECCS
T ss_pred HHhCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEEe-CCCCHHHHHHHHHhccEEEECcc
Confidence 99999999 999999999999999999999999999999999999975 78876 47899999999999999999999
Q ss_pred CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-CCcEEECCCCHHHHHHHHHHHHcCCHHHHH
Q 003999 440 RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQ 518 (780)
Q Consensus 440 rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~al~VnP~d~~~~A~ai~~aL~m~~~er~ 518 (780)
+||||||++|||||+. ++||+|+|||+|++++| .+|++|||||++++|+||.++|+||++||+
T Consensus 381 rEGfgLv~~EamA~~~----------------~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~ 444 (496)
T 3t5t_A 381 VDGQNLSTFEAPLVNE----------------RDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRA 444 (496)
T ss_dssp SBSCCSHHHHHHHHCS----------------SCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHH
T ss_pred cccCChhHHHHHHhCC----------------CCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHH
Confidence 9999999999999963 35899999999999999 479999999999999999999999999999
Q ss_pred HHHHHHhhHhhhCCHHHHHHHHHHHHHHHHHh
Q 003999 519 LRHEKHYRYVSTHDVAYWARSFAQDLERACRD 550 (780)
Q Consensus 519 ~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~~~~ 550 (780)
+|+++++++|++||+.+|+++|+++|..+...
T Consensus 445 ~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 445 EAAARRRDAARPWTLEAWVQAQLDGLAADHAA 476 (496)
T ss_dssp HHHHHHHHHHTTCBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHhhcccc
Confidence 99999999999999999999999999987554
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-93 Score=815.12 Aligned_cols=453 Identities=27% Similarity=0.519 Sum_probs=411.8
Q ss_pred CcEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChhHHHHHHHhhccCccEEEeecC
Q 003999 59 ERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLP 138 (780)
Q Consensus 59 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~~~~~v~~~l~~~~~~~pv~l~ 138 (780)
+|+||||||||+... + +.++|||+++|.+.+ +..+++||||+|.. ++ +++.+.+.+.++|+|+||||+
T Consensus 2 ~~livvsnr~p~~~~-----~----~~~~ggl~~~l~~~~-~~~~~~wvgw~g~~-~~-~~~~~~~~~~~~~~~~~v~l~ 69 (482)
T 1uqt_A 2 SRLVVVSNRIAPPDE-----H----AASAGGLAVGILGAL-KAAGGLWFGWSGET-GN-EDQPLKKVKKGNITWASFNLS 69 (482)
T ss_dssp CCEEEEEEECCCCC-------------CCCHHHHHHHHHH-HHHCEEEEEEEEEE-SC-CSSCCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCC-----C----CcCCCcHHHHHHHHH-hhCCCEEEeCCCCC-Cc-ccchhhhhccCCceEEEEECC
Confidence 689999999999721 1 356899999998665 45799999999865 22 222233344578999999999
Q ss_pred hHhhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHH
Q 003999 139 HDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRK 218 (780)
Q Consensus 139 ~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~ 218 (780)
++++++||+||||++|||+|||+++. ..|+++.|++|+++|+.||++|.+.+++ +|+|||||||++++|.++|+
T Consensus 70 ~~~~~~~y~gf~~~~lWp~~H~~~~~-----~~~~~~~w~~y~~vN~~fa~~l~~~~~~-~DiV~vHdyhl~~l~~~lr~ 143 (482)
T 1uqt_A 70 EQDLDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRK 143 (482)
T ss_dssp HHHHHHHTTTHHHHTHHHHHTTCGGG-----CCCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHHHhhhhhccccccCcCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEECchHHHHHHHHHH
Confidence 99999999999999999999999875 3799999999999999999999999986 59999999999999999999
Q ss_pred hcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEE
Q 003999 219 RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVY 298 (780)
Q Consensus 219 ~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~ 298 (780)
+.++++|+||+|+|||++++|+++|++++|+++++++|+||||+++|+++|+++|+++++.+...+ + .+.++|+.++
T Consensus 144 ~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~-~--~~~~~g~~~~ 220 (482)
T 1uqt_A 144 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSA-K--SHTAWGKAFR 220 (482)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETT-T--EEEETTEEEE
T ss_pred hCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccC-C--eEEECCeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876542 3 3678899999
Q ss_pred EEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcC
Q 003999 299 IKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNP 378 (780)
Q Consensus 299 i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 378 (780)
|.++|+|||++.|.+....+++.+ ..++|++++++++|++|||+|+.||+..+|+||++|++++|+++++++|||||.|
T Consensus 221 v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p 299 (482)
T 1uqt_A 221 TEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 299 (482)
T ss_dssp EEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCB
T ss_pred EEEEeccCCHHHHHHHhcCcchHH-HHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECC
Confidence 999999999999987554445544 6788999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCC
Q 003999 379 ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458 (780)
Q Consensus 379 ~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~ 458 (780)
+|+++++|+++++++++++++||.+||..+|.||+++.+.++.+++.++|++|||||+||++||||||++||||||.+
T Consensus 300 ~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~-- 377 (482)
T 1uqt_A 300 SRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 377 (482)
T ss_dssp CSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT--
T ss_pred CccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999853
Q ss_pred ccccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHH
Q 003999 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (780)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~ 538 (780)
.++||+|+|+++|+++++.+|++|||+|++++|+||.++|+|++++|+.|+++++++|.++|+..|++
T Consensus 378 ------------~~~gpvV~S~~~G~~~~l~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~ 445 (482)
T 1uqt_A 378 ------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQE 445 (482)
T ss_dssp ------------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred ------------CCCCCEEEECCCCCHHHhCCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 24589999999999999988999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 003999 539 SFAQDLERA 547 (780)
Q Consensus 539 ~~l~~l~~~ 547 (780)
+|+++|+++
T Consensus 446 ~~l~~l~~~ 454 (482)
T 1uqt_A 446 CFISDLKQI 454 (482)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhc
Confidence 999999876
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-25 Score=247.81 Aligned_cols=314 Identities=17% Similarity=0.160 Sum_probs=232.1
Q ss_pred HHHHHHHHHHHHHHHHHHc--CCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCCh---hHhhcCCCh------
Q 003999 177 WQAYVSANKIFADKVMEVI--NPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS---EIYRTLPVR------ 245 (780)
Q Consensus 177 w~~Y~~vN~~fA~~v~~~~--~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~~~lp~r------ 245 (780)
+..+....+.....+...+ ..+-|+|++|+++..+++.++++. .++|+++++|..++.. ..+..-..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHH-HCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhc-cCCCEEEEecccccccCchHHhCccccccccccc
Confidence 4444444454444444432 122499999999998888888754 6789999999987631 111111111
Q ss_pred --HHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHH
Q 003999 246 --DEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATK 323 (780)
Q Consensus 246 --~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~ 323 (780)
......+-.+|.|.+.+..+++.... .++. ...++.++|+|||.+.|.+....+.....
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~---------------~~~~i~vi~ngvd~~~~~~~~~~~~~~~~ 238 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRN---------------FEGKITYVFNGIDCSFWNESYLTGSRDER 238 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHH----HHGG---------------GTTSEEECCCCCCTTTSCGGGSCSCHHHH
T ss_pred eeeHhhhhhhhccEEEecCHHHHHHHhh----hhhh---------------cCCceeecCCCCCchhcCcccccchhhhh
Confidence 22333455799999999987776322 1111 11257899999999998765322233445
Q ss_pred HHHHHHHc--CCCeEEEEecccc-ccCChHHHHHHHHHHHHhC--CCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHH
Q 003999 324 IKEIEKQF--DGKKLILGIDDMD-IFKGISLKLLAMEQLLQQH--PGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAK 398 (780)
Q Consensus 324 ~~~lr~~~--~~~~vil~Vdrld-~~KGi~~~l~A~~~ll~~~--P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~ 398 (780)
...+++++ +++++|+++||+. +.||+..+++|++++.+++ |+++ |+.+|. ++ .++..+++++++
T Consensus 239 ~~~~~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~----l~i~G~-----g~--~~~~~~l~~~~~ 307 (439)
T 3fro_A 239 KKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FIIIGK-----GD--PELEGWARSLEE 307 (439)
T ss_dssp HHHHHHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEE----EEEECC-----CC--HHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCCeE----EEEEcC-----CC--hhHHHHHHHHHh
Confidence 56777777 3459999999999 9999999999999998766 6655 887763 22 233455666665
Q ss_pred HHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEE
Q 003999 399 RINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVV 478 (780)
Q Consensus 399 ~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~ 478 (780)
+.+ .++++.+.++.+++.++|+.||++|+||..||||++++|||||| .|+|+
T Consensus 308 ~~~---------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G-------------------~Pvi~ 359 (439)
T 3fro_A 308 KHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG-------------------AIPIA 359 (439)
T ss_dssp HCT---------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTT-------------------CEEEE
T ss_pred hcC---------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCC-------------------CCeEE
Confidence 543 25667888999999999999999999999999999999999997 58999
Q ss_pred cCCCCccccC-C-CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHHHH
Q 003999 479 SEFIGCSPSL-S-GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACR 549 (780)
Q Consensus 479 Se~~G~~~~l-~-~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~~~ 549 (780)
|..+|..+.+ + .|++++|.|++++|++|.+++++.++.+....++.+++++++++..+++.+++-++++.+
T Consensus 360 s~~~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 360 SAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp ESSTHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred cCCCCcceeEEcCceEEeCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHH
Confidence 9999888888 3 589999999999999999999954456667777788889889999999999988876543
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.7e-23 Score=242.27 Aligned_cols=294 Identities=17% Similarity=0.152 Sum_probs=199.0
Q ss_pred CCEEEEeCCccchHHHHHHHhc------CCCcEEEEEeCCC-----CChhHh-hcCCCh--------------------H
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRF------NRIKLGFFLHSPF-----PSSEIY-RTLPVR--------------------D 246 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~~-~~lp~r--------------------~ 246 (780)
+||+|+||||..++|.+++... .+++++|+.|..- |....- ..+|.. .
T Consensus 154 ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 233 (536)
T 3vue_A 154 DVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKIN 233 (536)
T ss_dssp CEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEE
T ss_pred CEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchh
Confidence 4789999999999999998764 3689999999752 211110 001110 1
Q ss_pred HHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCC--------c
Q 003999 247 EILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNL--------P 318 (780)
Q Consensus 247 eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~--------~ 318 (780)
-+-.++..||.|...+..|++..++.-. .|.. ++...+..+|.++|||||.+.|.+.... .
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~~~--~g~~---------l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~ 302 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISGIA--RGCE---------LDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDAT 302 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTTCC--CCSS---------SCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTT
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhcccc--cccc---------cccccccCCeEEEECCcchhhcCCCCccccccccchh
Confidence 2345677899999999999887654210 1111 1112244568899999999988763210 0
Q ss_pred h----hHHHHHHHHHHc-----CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHH
Q 003999 319 A----TATKIKEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEA 389 (780)
Q Consensus 319 ~----~~~~~~~lr~~~-----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l 389 (780)
. .......+++++ ++.++|++|||+++.||+..+++|+++++++++ + |+.+|. ++.. .
T Consensus 303 ~~~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~--~----l~l~G~---G~~~----~ 369 (536)
T 3vue_A 303 TAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV--Q----IVLLGT---GKKK----F 369 (536)
T ss_dssp THHHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC--E----EEEECC---BCHH----H
T ss_pred hhhhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCC--e----EEEEec---cCch----H
Confidence 0 112224455555 467899999999999999999999999976543 2 555553 1222 2
Q ss_pred HHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCC
Q 003999 390 KKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERD 469 (780)
Q Consensus 390 ~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~ 469 (780)
..+++.++...+. .|.+. +..+.+++..+|+.||+||+||.+||||++++|||+||
T Consensus 370 ~~~~~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G--------------- 425 (536)
T 3vue_A 370 EKLLKSMEEKYPG--------KVRAV-VKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYG--------------- 425 (536)
T ss_dssp HHHHHHHHHHSTT--------TEEEE-CSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTT---------------
T ss_pred HHHHHHHHhhcCC--------ceEEE-EeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcC---------------
Confidence 2333444433322 25544 46788999999999999999999999999999999997
Q ss_pred CCCCceEEEcCCCCccccCC---CcE----------EECCCCHHHHHHHHHHHHcCCH-HHHHHHHHHHhhHhhhCCHHH
Q 003999 470 SPHTSMLVVSEFIGCSPSLS---GAI----------RVNPWDIDAVADAMTLAINMRD-SEKQLRHEKHYRYVSTHDVAY 535 (780)
Q Consensus 470 ~~~~g~lV~Se~~G~~~~l~---~al----------~VnP~d~~~~A~ai~~aL~m~~-~er~~r~~~~~~~V~~~~~~~ 535 (780)
.|+|+|..+|+.+.+. +|+ +|+|.|++++|+||.++|..-. ++++++.++. .-+.++|.+
T Consensus 426 ----~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~a--m~~~fSW~~ 499 (536)
T 3vue_A 426 ----TPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNC--MNQDLSWKG 499 (536)
T ss_dssp ----CCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHH--HHSCCSSHH
T ss_pred ----CCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHH--HHhcCCHHH
Confidence 5899999999998883 244 7899999999999999986322 1222222221 124588888
Q ss_pred HHHHHHHHHHH
Q 003999 536 WARSFAQDLER 546 (780)
Q Consensus 536 Wa~~~l~~l~~ 546 (780)
-|+++++-+.+
T Consensus 500 ~A~~y~~ly~~ 510 (536)
T 3vue_A 500 PAKNWENVLLG 510 (536)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 88887765544
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8.9e-24 Score=241.81 Aligned_cols=303 Identities=14% Similarity=0.021 Sum_probs=211.9
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhH-hhcC----C---------ChHHH-HHhhhcCCEEEeecHH
Q 003999 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEI-YRTL----P---------VRDEI-LRGLLNCDLIGFHTFD 264 (780)
Q Consensus 200 DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~-~~~l----p---------~r~ei-l~~ll~~Dligf~t~~ 264 (780)
|+||+|+++..+++.++.+. .++|+++++|..++.... +... | .+..+ ...+-.+|.|.+.+..
T Consensus 122 Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~ 200 (499)
T 2r60_A 122 QVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQ 200 (499)
T ss_dssp SEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHH
T ss_pred CEEEEcCCcchHHHHHHHHh-cCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHH
Confidence 89999998766666666554 368899999987542110 0000 0 00111 1223468999988876
Q ss_pred HHHHHHHHHHhhhC-ceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--------CCCe
Q 003999 265 YARHFLSCCSRMLG-LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--------DGKK 335 (780)
Q Consensus 265 y~~~Fl~~~~r~l~-~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~--------~~~~ 335 (780)
.++.+.+. ..+| .... ....++.++|+|||.+.|.+.. .......+++++ .+++
T Consensus 201 ~~~~~~~~--~~~g~~~~~-----------~~~~ki~vi~ngvd~~~~~~~~----~~~~~~~~r~~~~~~~~~~~~~~~ 263 (499)
T 2r60_A 201 ERFGQYSH--DLYRGAVNV-----------EDDDKFSVIPPGVNTRVFDGEY----GDKIKAKITKYLERDLGSERMELP 263 (499)
T ss_dssp HHHHTTTS--GGGTTTCCT-----------TCGGGEEECCCCBCTTTSSSCC----CHHHHHHHHHHHHHHSCGGGTTSC
T ss_pred HHHHHHhh--hcccccccc-----------cCCCCeEEECCCcChhhcCccc----hhhhHHHHHHHhcccccccCCCCc
Confidence 55544321 0012 1000 0122578899999998886531 112234455554 3788
Q ss_pred EEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCCh-------hHHHHHHHHHHHHHHHHhhccCCCC
Q 003999 336 LILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSG-------KDVQEAKKETYLTAKRINEVYGSPN 408 (780)
Q Consensus 336 vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~-------~~~~~l~~ei~~lv~~In~~~g~~~ 408 (780)
+|++|||+++.||+..+++|+..+.+++|+. +.|+++|... +.. ....++.+++++++++.+..
T Consensus 264 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~----- 334 (499)
T 2r60_A 264 AIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNNDCR----- 334 (499)
T ss_dssp EEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTTCB-----
T ss_pred EEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcCCC-----
Confidence 9999999999999999999999998776653 3466565411 110 11223456777777665422
Q ss_pred cccEEEecCCCCHHHHHHHHHhc----ceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCc
Q 003999 409 YEPVVLIDRPVPRFEKSAYYAVA----ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC 484 (780)
Q Consensus 409 ~~pV~~~~~~v~~~el~aly~~A----Dv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~ 484 (780)
..|++ .|.++.+++.++|+.| |++|+||..||||++++|||||| .|+|+|..+|.
T Consensus 335 -~~V~~-~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G-------------------~PvI~s~~~g~ 393 (499)
T 2r60_A 335 -GKVSM-FPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASG-------------------LPAVVTRNGGP 393 (499)
T ss_dssp -TTEEE-EECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTT-------------------CCEEEESSBHH
T ss_pred -ceEEE-CCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcC-------------------CCEEEecCCCH
Confidence 12665 4689999999999999 99999999999999999999997 48999998888
Q ss_pred cccCC---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh-CCHHHHHHHHHHHHHHHHHhh
Q 003999 485 SPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQDLERACRDH 551 (780)
Q Consensus 485 ~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~~~l~~l~~~~~~~ 551 (780)
.+.+. .|++++|.|++++|++|.++++.+ +.+....++.++++.+ +++...++.+++-++++....
T Consensus 394 ~e~v~~~~~g~l~~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 463 (499)
T 2r60_A 394 AEILDGGKYGVLVDPEDPEDIARGLLKAFESE-ETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRK 463 (499)
T ss_dssp HHHTGGGTSSEEECTTCHHHHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC-
T ss_pred HHHhcCCceEEEeCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 88883 389999999999999999999965 3466666778888877 999999999999998876653
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-22 Score=222.17 Aligned_cols=286 Identities=16% Similarity=0.174 Sum_probs=210.4
Q ss_pred HHHHcCCCCCEEEEeCCccch-HHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHh-hhcCCEEEeecHHHHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLMV-LPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRG-LLNCDLIGFHTFDYARH 268 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~l-lp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~-ll~~Dligf~t~~y~~~ 268 (780)
+++..++ |+||+|+...+. +..++++ ....+++++.|...+ .+...+....+++. +-.+|.|.+.+....+.
T Consensus 81 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~---~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 154 (394)
T 3okp_A 81 IIREREI--DNVWFGAAAPLALMAGTAKQ-AGASKVIASTHGHEV---GWSMLPGSRQSLRKIGTEVDVLTYISQYTLRR 154 (394)
T ss_dssp HHHHTTC--SEEEESSCTTGGGGHHHHHH-TTCSEEEEECCSTHH---HHTTSHHHHHHHHHHHHHCSEEEESCHHHHHH
T ss_pred HHHhcCC--CEEEECCcchHHHHHHHHHh-cCCCcEEEEeccchh---hhhhcchhhHHHHHHHHhCCEEEEcCHHHHHH
Confidence 3445555 899999876553 3344444 333358889996532 12222333444444 34699999999877666
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccc
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDI 345 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~ 345 (780)
+.+. .+. ..++.++|+|||.+.|.+. .......+++++ +++++|+++||+++
T Consensus 155 ~~~~----~~~----------------~~~~~vi~ngv~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~G~~~~ 209 (394)
T 3okp_A 155 FKSA----FGS----------------HPTFEHLPSGVDVKRFTPA-----TPEDKSATRKKLGFTDTTPVIACNSRLVP 209 (394)
T ss_dssp HHHH----HCS----------------SSEEEECCCCBCTTTSCCC-----CHHHHHHHHHHTTCCTTCCEEEEESCSCG
T ss_pred HHHh----cCC----------------CCCeEEecCCcCHHHcCCC-----CchhhHHHHHhcCCCcCceEEEEEecccc
Confidence 6542 121 1267899999999887642 123345677777 35689999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+..+++|++++.+++|+++ |+.+|. ++..+ ++++++..++ ..|++ .+.++.+++.
T Consensus 210 ~Kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~----~l~~~~~~~~--------~~v~~-~g~~~~~~~~ 267 (394)
T 3okp_A 210 RKGQDSLIKAMPQVIAARPDAQ----LLIVGS-----GRYES----TLRRLATDVS--------QNVKF-LGRLEYQDMI 267 (394)
T ss_dssp GGCHHHHHHHHHHHHHHSTTCE----EEEECC-----CTTHH----HHHHHTGGGG--------GGEEE-EESCCHHHHH
T ss_pred ccCHHHHHHHHHHHHhhCCCeE----EEEEcC-----chHHH----HHHHHHhccc--------CeEEE-cCCCCHHHHH
Confidence 9999999999999999999876 877763 33333 3334432221 13664 4689999999
Q ss_pred HHHHhcceeeeccCC-------cCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC--CcEEECC
Q 003999 426 AYYAVAECCIVNAVR-------DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNP 496 (780)
Q Consensus 426 aly~~ADv~vvtS~r-------EGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP 496 (780)
++|+.||++|+||.. ||||++++|||+|| .|+|+|..+|..+.+. .|++++|
T Consensus 268 ~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G-------------------~PvI~~~~~~~~e~i~~~~g~~~~~ 328 (394)
T 3okp_A 268 NTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACG-------------------VPVIAGTSGGAPETVTPATGLVVEG 328 (394)
T ss_dssp HHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTT-------------------CCEEECSSTTGGGGCCTTTEEECCT
T ss_pred HHHHhCCEEEecCccccccccccccCcHHHHHHHcC-------------------CCEEEeCCCChHHHHhcCCceEeCC
Confidence 999999999999999 99999999999997 4899999998888883 5899999
Q ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh-CCHHHHHHHHHHHHHHHHH
Q 003999 497 WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQDLERACR 549 (780)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~-~~~~~Wa~~~l~~l~~~~~ 549 (780)
.|++++|++|.++++.+ +.++...++.++++.+ +++..+++.+++-+++...
T Consensus 329 ~d~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r 381 (394)
T 3okp_A 329 SDVDKLSELLIELLDDP-IRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPR 381 (394)
T ss_dssp TCHHHHHHHHHHHHTCH-HHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC
T ss_pred CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcc
Confidence 99999999999999965 3566666778888875 8999999999988876543
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-22 Score=228.62 Aligned_cols=299 Identities=18% Similarity=0.128 Sum_probs=205.6
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCCh----hHhhc--CCC------------hHHHH-HhhhcCCEEE
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS----EIYRT--LPV------------RDEIL-RGLLNCDLIG 259 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~----e~~~~--lp~------------r~eil-~~ll~~Dlig 259 (780)
-|+|++|+++..+++.+++.+..++|+++++|..++.. ..+.. ++. ...+. ..+..+|.|.
T Consensus 130 ~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi 209 (485)
T 2qzs_A 130 PDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHIT 209 (485)
T ss_dssp CSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEEE
T ss_pred CCEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeEE
Confidence 49999999998888888874456899999999875421 11111 010 01122 2345689999
Q ss_pred eecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeE--EEEEEeecCCCchhhhhhcCC-----------chhHHHHHH
Q 003999 260 FHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRT--VYIKILPVGVHMGRLESVLNL-----------PATATKIKE 326 (780)
Q Consensus 260 f~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~--~~i~i~P~GId~~~~~~~~~~-----------~~~~~~~~~ 326 (780)
..+...++.+.+. .+|..... . ...+. .++.++|+|||.+.|.+.... +........
T Consensus 210 ~~S~~~~~~~~~~---~~~~~~~~---~----~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (485)
T 2qzs_A 210 AVSPTYAREITEP---QFAYGMEG---L----LQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQ 279 (485)
T ss_dssp ESSHHHHHHTTSH---HHHTTCHH---H----HHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHH
T ss_pred ecCHHHHHHHhcc---ccCcchHH---H----HHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHH
Confidence 9888766555321 01100000 0 00001 257889999999888653210 011122355
Q ss_pred HHHHcC-----CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHh
Q 003999 327 IEKQFD-----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRIN 401 (780)
Q Consensus 327 lr~~~~-----~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In 401 (780)
+++++. ++++|++|||+++.||+..+++|++.+.+ +++ .|+++|. |+. ++++++++++.+.+
T Consensus 280 ~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~----~l~ivG~-----g~~--~~~~~l~~~~~~~~ 346 (485)
T 2qzs_A 280 LQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGG----QLALLGA-----GDP--VLQEGFLAAAAEYP 346 (485)
T ss_dssp HHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTC----EEEEEEE-----ECH--HHHHHHHHHHHHST
T ss_pred HHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CCc----EEEEEeC-----Cch--HHHHHHHHHHHhCC
Confidence 677762 67899999999999999999999999876 344 4887774 221 24456666666542
Q ss_pred hccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCC
Q 003999 402 EVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF 481 (780)
Q Consensus 402 ~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (780)
..|+++.+. +.+++..+|+.||++|+||..||||++++|||||| .|+|+|..
T Consensus 347 --------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G-------------------~PvI~s~~ 398 (485)
T 2qzs_A 347 --------GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYG-------------------TLPLVRRT 398 (485)
T ss_dssp --------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT-------------------CEEEEESS
T ss_pred --------CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCC-------------------CCEEECCC
Confidence 137656666 78888999999999999999999999999999997 58999999
Q ss_pred CCccccCC------------CcEEECCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHH
Q 003999 482 IGCSPSLS------------GAIRVNPWDIDAVADAMTLAIN--MRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 482 ~G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
+|..+.+. .|++++|.|++++|++|.+++. ..++.+....++.++ ..+++...++.+++-+++.
T Consensus 399 gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~ 476 (485)
T 2qzs_A 399 GGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRL 476 (485)
T ss_dssp HHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHH
T ss_pred CCccceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHh
Confidence 88888873 4799999999999999999994 233334443344443 7799999999998888776
Q ss_pred HHh
Q 003999 548 CRD 550 (780)
Q Consensus 548 ~~~ 550 (780)
..+
T Consensus 477 ~~~ 479 (485)
T 2qzs_A 477 KLE 479 (485)
T ss_dssp C--
T ss_pred hhh
Confidence 444
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8.9e-23 Score=228.69 Aligned_cols=293 Identities=15% Similarity=0.148 Sum_probs=210.2
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhH-hhcC----C-ChHHHHH-hhhcCCEEEeecHHHHHHHHH
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEI-YRTL----P-VRDEILR-GLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~-~~~l----p-~r~eil~-~ll~~Dligf~t~~y~~~Fl~ 271 (780)
-|+|++|++...+++.++.+. .++++++++|..++.... +... + .+..+.+ .+-.+|.|.+.+....+.+.+
T Consensus 123 ~Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~ 201 (438)
T 3c48_A 123 YDLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMH 201 (438)
T ss_dssp CSEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred CCEEEeCCccHHHHHHHHHHH-cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHH
Confidence 399999987665555555554 378999999987532110 0000 0 0111222 234699999999877666643
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCC
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKG 348 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KG 348 (780)
.+|.. ..++.++|+|||.+.|.+.. ......+++++ .++++|+++||+.+.||
T Consensus 202 ----~~g~~---------------~~k~~vi~ngvd~~~~~~~~-----~~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg 257 (438)
T 3c48_A 202 ----HYDAD---------------PDRISVVSPGADVELYSPGN-----DRATERSRRELGIPLHTKVVAFVGRLQPFKG 257 (438)
T ss_dssp ----HHCCC---------------GGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGC
T ss_pred ----HhCCC---------------hhheEEecCCccccccCCcc-----cchhhhhHHhcCCCCCCcEEEEEeeecccCC
Confidence 12321 12477899999998876431 11123356666 47889999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHH
Q 003999 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (780)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 428 (780)
+..+++|++.+.+++|+. ++.|+++|.+. ..++. .+++++++++.+.. ..|. +.+.++.+++.++|
T Consensus 258 ~~~li~a~~~l~~~~p~~--~~~l~i~G~~~-~~g~~----~~~l~~~~~~~~l~------~~v~-~~g~~~~~~~~~~~ 323 (438)
T 3c48_A 258 PQVLIKAVAALFDRDPDR--NLRVIICGGPS-GPNAT----PDTYRHMAEELGVE------KRIR-FLDPRPPSELVAVY 323 (438)
T ss_dssp HHHHHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTTCT------TTEE-EECCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCc--ceEEEEEeCCC-CCCcH----HHHHHHHHHHcCCC------CcEE-EcCCCChHHHHHHH
Confidence 999999999999998842 25588777532 11222 33455555554321 1365 45789999999999
Q ss_pred HhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHH
Q 003999 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (780)
Q Consensus 429 ~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~a 505 (780)
+.||++|+||..||||++++|||+|| .|+|+|..+|..+.+. .|++++|.|++++|++
T Consensus 324 ~~adv~v~ps~~e~~~~~~~Eama~G-------------------~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~ 384 (438)
T 3c48_A 324 RAADIVAVPSFNESFGLVAMEAQASG-------------------TPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADA 384 (438)
T ss_dssp HHCSEEEECCSCCSSCHHHHHHHHTT-------------------CCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHH
T ss_pred HhCCEEEECccccCCchHHHHHHHcC-------------------CCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHH
Confidence 99999999999999999999999997 4899999988888883 3899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHHHHh
Q 003999 506 MTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRD 550 (780)
Q Consensus 506 i~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~~~~ 550 (780)
|.++++.++ .+....++.++++.++++...++.+++-++++...
T Consensus 385 i~~l~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 385 LATLLDDDE-TRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhh
Confidence 999999643 45555677888888899999999999998887664
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.6e-22 Score=227.34 Aligned_cols=296 Identities=17% Similarity=0.172 Sum_probs=205.4
Q ss_pred CCEEEEeCCccchHHHHHHHh-cCCCcEEEEEeCCCCCh----hHhhc--CCC------------hHHHHH-hhhcCCEE
Q 003999 199 DDCVWVHDYHLMVLPTFLRKR-FNRIKLGFFLHSPFPSS----EIYRT--LPV------------RDEILR-GLLNCDLI 258 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~-~~~~~i~~flH~PfP~~----e~~~~--lp~------------r~eil~-~ll~~Dli 258 (780)
-|+||+|+++..+++.++++. ..++|+++++|..++.. ..+.. +|. ...+.+ .+..+|.|
T Consensus 131 ~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 210 (485)
T 1rzu_A 131 PDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATAL 210 (485)
T ss_dssp CSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEE
T ss_pred CCEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCEE
Confidence 399999999888888888764 36789999999876421 11111 110 011222 34568999
Q ss_pred EeecHHHHHHHHHHHHhhhC--ceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCC-----------chhHHHHH
Q 003999 259 GFHTFDYARHFLSCCSRMLG--LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNL-----------PATATKIK 325 (780)
Q Consensus 259 gf~t~~y~~~Fl~~~~r~l~--~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~-----------~~~~~~~~ 325 (780)
...+....+.+.+. ..| ++.. +.....++.++|+|||.+.|.+.... +.......
T Consensus 211 i~~S~~~~~~~~~~---~~g~~~~~~---------~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (485)
T 1rzu_A 211 STVSPSYAEEILTA---EFGMGLEGV---------IGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKK 278 (485)
T ss_dssp EESCHHHHHHTTSH---HHHTTCHHH---------HHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHH
T ss_pred EecCHhHHHHHhcc---ccCcchHHH---------HHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHH
Confidence 99888766655321 011 0000 00011247889999999888653210 01112234
Q ss_pred HHHHHcC---C-CeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHh
Q 003999 326 EIEKQFD---G-KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRIN 401 (780)
Q Consensus 326 ~lr~~~~---~-~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In 401 (780)
.+++++. + +++|++|||+++.||+..+++|+.++.+ +++ .|+++|. ++. ++++++++++.+.+
T Consensus 279 ~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~----~l~ivG~-----g~~--~~~~~l~~~~~~~~ 345 (485)
T 1rzu_A 279 AVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGG----RLVVLGA-----GDV--ALEGALLAAASRHH 345 (485)
T ss_dssp HHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTC----EEEEEEC-----BCH--HHHHHHHHHHHHTT
T ss_pred HHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cCc----eEEEEeC-----Cch--HHHHHHHHHHHhCC
Confidence 5677662 2 6799999999999999999999999876 344 4887873 221 24456666666542
Q ss_pred hccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCC
Q 003999 402 EVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF 481 (780)
Q Consensus 402 ~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~ 481 (780)
..|+++.+. +.+++..+|+.||++|+||..||||++++|||||| .|+|+|..
T Consensus 346 --------~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G-------------------~PvI~s~~ 397 (485)
T 1rzu_A 346 --------GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG-------------------CIPVVART 397 (485)
T ss_dssp --------TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT-------------------CEEEEESS
T ss_pred --------CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCC-------------------CCEEEeCC
Confidence 137756666 78888999999999999999999999999999997 58999999
Q ss_pred CCccccCC------------CcEEECCCCHHHHHHHHHHHHc--CCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHH
Q 003999 482 IGCSPSLS------------GAIRVNPWDIDAVADAMTLAIN--MRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 482 ~G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~--m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
+|..+.+. .|++++|.|++++|++|.++++ ..++.+....++.++ ..+++...++.+++-++++
T Consensus 398 gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~ 475 (485)
T 1rzu_A 398 GGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQL 475 (485)
T ss_dssp HHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHH
T ss_pred CChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHh
Confidence 99888883 3799999999999999999994 233344444444443 6799999999998877766
Q ss_pred HH
Q 003999 548 CR 549 (780)
Q Consensus 548 ~~ 549 (780)
..
T Consensus 476 ~~ 477 (485)
T 1rzu_A 476 IS 477 (485)
T ss_dssp TC
T ss_pred hC
Confidence 43
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=8e-23 Score=227.92 Aligned_cols=298 Identities=17% Similarity=0.169 Sum_probs=206.6
Q ss_pred HHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCCh--hHhhcCCChHHHHHh
Q 003999 174 RVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS--EIYRTLPVRDEILRG 251 (780)
Q Consensus 174 ~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~--e~~~~lp~r~eil~~ 251 (780)
...|..|....+.+++.+ +..++ |+|++|+++...+..++++ ..|++++.|..++.. ..+ ..+.+.
T Consensus 105 ~~~~~~~~~~~~~~~~~l-~~~~~--Dvv~~~~~~~~~~~~~~~~---~~p~v~~~h~~~~~~~~~~~------~~~~~~ 172 (416)
T 2x6q_A 105 EEMKELYLNVNRENSKFI-DLSSF--DYVLVHDPQPAALIEFYEK---KSPWLWRCHIDLSSPNREFW------EFLRRF 172 (416)
T ss_dssp HHHHHHHHHHHHHHHHSS-CGGGS--SEEEEESSTTGGGGGGSCC---CSCEEEECCSCCSSCCHHHH------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-hhcCC--CEEEEeccchhhHHHHHHh---cCCEEEEEccccCCccHHHH------HHHHHH
Confidence 344555554444443322 33344 9999999987766555543 278999999887542 111 111222
Q ss_pred hhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc
Q 003999 252 LLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF 331 (780)
Q Consensus 252 ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~ 331 (780)
+..+|.+.+.+.++.+.. +. ..++.++|+|||+..+..... .......+++++
T Consensus 173 ~~~~~~~i~~~s~~~~~~----------------------~~--~~~~~vi~ngvd~~~~~~~~~---~~~~~~~~r~~~ 225 (416)
T 2x6q_A 173 VEKYDRYIFHLPEYVQPE----------------------LD--RNKAVIMPPSIDPLSEKNVEL---KQTEILRILERF 225 (416)
T ss_dssp HTTSSEEEESSGGGSCTT----------------------SC--TTTEEECCCCBCTTSTTTSCC---CHHHHHHHHHHT
T ss_pred HHhCCEEEEechHHHHhh----------------------CC--ccceEEeCCCCChhhhccccc---ChhhHHHHHHHh
Confidence 334565554443322110 01 024678999999877654211 123345677777
Q ss_pred ---CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 003999 332 ---DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN 408 (780)
Q Consensus 332 ---~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~ 408 (780)
+++++|+++||+++.||+..+++|++.+.+++|+++ |+++|.... ..++ ....+++++++.+..
T Consensus 226 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~----l~i~G~g~~-~~~~---~~~~l~~~~~~~~~~----- 292 (416)
T 2x6q_A 226 DVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQ----LLLVGVMAH-DDPE---GWIYFEKTLRKIGED----- 292 (416)
T ss_dssp TCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCE----EEEEECCCT-TCHH---HHHHHHHHHHHHTTC-----
T ss_pred CCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEEecCcc-cchh---HHHHHHHHHHHhCCC-----
Confidence 467899999999999999999999999999999876 887875321 1122 234455666655431
Q ss_pred cccEEEec--CCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccc
Q 003999 409 YEPVVLID--RPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSP 486 (780)
Q Consensus 409 ~~pV~~~~--~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~ 486 (780)
..|++++ ..++.+++.++|+.||++|+||..||||++++|||||| .|+|+|..+|..+
T Consensus 293 -~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G-------------------~PvI~~~~~g~~e 352 (416)
T 2x6q_A 293 -YDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKG-------------------KPVIGRAVGGIKF 352 (416)
T ss_dssp -TTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTT-------------------CCEEEESCHHHHH
T ss_pred -CcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcC-------------------CCEEEccCCCChh
Confidence 1377653 24568899999999999999999999999999999997 4899999988888
Q ss_pred cCC---CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhh-hCCHHHHHHHHHHHHHH
Q 003999 487 SLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWARSFAQDLER 546 (780)
Q Consensus 487 ~l~---~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~-~~~~~~Wa~~~l~~l~~ 546 (780)
.+. .|++++ |++++|++|.++++.++ .++...++.++++. .+++...++.+++-+++
T Consensus 353 ~i~~~~~g~l~~--d~~~la~~i~~ll~~~~-~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 353 QIVDGETGFLVR--DANEAVEVVLYLLKHPE-VSKEMGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp HCCBTTTEEEES--SHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred heecCCCeEEEC--CHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 873 488887 99999999999999653 45555666788875 68999999988876654
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.7e-22 Score=223.19 Aligned_cols=287 Identities=13% Similarity=0.129 Sum_probs=203.3
Q ss_pred HHcCCCCCEEEEeCCccchHHHHHHHh-cC-CCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCC--EEEeecHHHHHH
Q 003999 193 EVINPDDDCVWVHDYHLMVLPTFLRKR-FN-RIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCD--LIGFHTFDYARH 268 (780)
Q Consensus 193 ~~~~~~~DiVwvhDyhl~llp~~lr~~-~~-~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~D--ligf~t~~y~~~ 268 (780)
+..+| |+|++|.+...+.+.+.+.. .| ..++...+|...+.. +..+-..+-.+| .|.+.+....+.
T Consensus 78 ~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ii~~S~~~~~~ 147 (413)
T 3oy2_A 78 DVHKP--DIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNI--------RENLWWIFSHPKVVGVMAMSKCWISD 147 (413)
T ss_dssp HHHCC--SEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSC--------CGGGGGGGGCTTEEEEEESSTHHHHH
T ss_pred HhcCC--CEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhh--------HHHHHHHHhccCCceEEEcCHHHHHH
Confidence 34456 89999954443333333222 22 345666666554321 111222233577 888888766655
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---C--CCeEEEEeccc
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---D--GKKLILGIDDM 343 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~--~~~vil~Vdrl 343 (780)
+.+ +|. ..++.++|+|||.+.|.. .++++ + ++++|+++||+
T Consensus 148 ~~~-----~~~----------------~~~~~vi~ngvd~~~~~~-------------~~~~~~~~~~~~~~~il~vGr~ 193 (413)
T 3oy2_A 148 ICN-----YGC----------------KVPINIVSHFVDTKTIYD-------------ARKLVGLSEYNDDVLFLNMNRN 193 (413)
T ss_dssp HHH-----TTC----------------CSCEEECCCCCCCCCCTT-------------HHHHTTCGGGTTSEEEECCSCS
T ss_pred HHH-----cCC----------------CCceEEeCCCCCHHHHHH-------------HHHhcCCCcccCceEEEEcCCC
Confidence 543 232 125789999999987721 22333 2 68899999999
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHH
Q 003999 344 DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFE 423 (780)
Q Consensus 344 d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~e 423 (780)
++.||+..+++|+.++.+++|+++ |+.+|...... ..++++++++++++.+..-.-.-+..|+++.|.++.++
T Consensus 194 ~~~Kg~~~li~a~~~l~~~~~~~~----l~ivG~g~~~~---~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~ 266 (413)
T 3oy2_A 194 TARKRLDIYVLAAARFISKYPDAK----VRFLCNSHHES---KFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDER 266 (413)
T ss_dssp SGGGTHHHHHHHHHHHHHHCTTCC----EEEEEECCTTC---SCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHH
T ss_pred chhcCcHHHHHHHHHHHHhCCCcE----EEEEeCCcccc---hhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHH
Confidence 999999999999999999999987 87787543211 11244566666665532200000002577889999999
Q ss_pred HHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCCC-------------
Q 003999 424 KSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSG------------- 490 (780)
Q Consensus 424 l~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~------------- 490 (780)
+.++|+.||++|+||..||||++++|||+|| .|+|+|..+|..+.+.+
T Consensus 267 ~~~~~~~adv~v~pS~~E~~~~~~lEAma~G-------------------~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 267 VDMMYNACDVIVNCSSGEGFGLCSAEGAVLG-------------------KPLIISAVGGADDYFSGDCVYKIKPSAWIS 327 (413)
T ss_dssp HHHHHHHCSEEEECCSCCSSCHHHHHHHTTT-------------------CCEEEECCHHHHHHSCTTTSEEECCCEEEE
T ss_pred HHHHHHhCCEEEeCCCcCCCCcHHHHHHHcC-------------------CCEEEcCCCChHHHHccCcccccccccccc
Confidence 9999999999999999999999999999997 48999999998888742
Q ss_pred -----cE--EECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHHHHHhh
Q 003999 491 -----AI--RVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLERACRDH 551 (780)
Q Consensus 491 -----al--~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~~~~~~ 551 (780)
|+ +++|.|++++|++| ++++.+ ++++.+.++.++++ ..+++..+++.+++-++++.+..
T Consensus 328 ~~~~~G~~gl~~~~d~~~la~~i-~l~~~~-~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 328 VDDRDGIGGIEGIIDVDDLVEAF-TFFKDE-KNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp CTTTCSSCCEEEECCHHHHHHHH-HHTTSH-HHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred cccccCcceeeCCCCHHHHHHHH-HHhcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 77 99999999999999 999854 45666667788888 46899999999999998876543
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.6e-22 Score=218.37 Aligned_cols=283 Identities=13% Similarity=0.140 Sum_probs=200.2
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHH-hcC-CCcEEEEEeCCCCChhHhhcCCChHHHHHh-hhcCCEEEeecHHHHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRK-RFN-RIKLGFFLHSPFPSSEIYRTLPVRDEILRG-LLNCDLIGFHTFDYARH 268 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~-~~~-~~~i~~flH~PfP~~e~~~~lp~r~eil~~-ll~~Dligf~t~~y~~~ 268 (780)
++..+| |+|++|..+...++.++.+ ... ++|+++++|...+ ..+..-+....+.+. +-.+|.|...+....+.
T Consensus 95 l~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 170 (394)
T 2jjm_A 95 AQRENL--DILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINE 170 (394)
T ss_dssp HHHHTC--SEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHH
T ss_pred HHHcCC--CEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHH
Confidence 344566 8999998765544444433 332 6899999997422 111112222333333 44699999998876665
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccc
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDI 345 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~ 345 (780)
+.+. .+. ..++.++|+|||.+.|.+.. ...+++++ +++++|+++||+.+
T Consensus 171 ~~~~----~~~----------------~~~~~vi~ngv~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~~~~ 222 (394)
T 2jjm_A 171 THEL----VKP----------------NKDIQTVYNFIDERVYFKRD--------MTQLKKEYGISESEKILIHISNFRK 222 (394)
T ss_dssp HHHH----TCC----------------SSCEEECCCCCCTTTCCCCC--------CHHHHHHTTCC---CEEEEECCCCG
T ss_pred HHHh----hCC----------------cccEEEecCCccHHhcCCcc--------hHHHHHHcCCCCCCeEEEEeecccc
Confidence 5431 221 12578899999998876431 12345555 46789999999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+..+++|++.+.++ ++++ |+++|. +++.+ ++++++++.+.. ..|.+.+ . .+++.
T Consensus 223 ~Kg~~~li~a~~~l~~~-~~~~----l~i~G~-----g~~~~----~l~~~~~~~~l~------~~v~~~g-~--~~~~~ 279 (394)
T 2jjm_A 223 VKRVQDVVQAFAKIVTE-VDAK----LLLVGD-----GPEFC----TILQLVKNLHIE------DRVLFLG-K--QDNVA 279 (394)
T ss_dssp GGTHHHHHHHHHHHHHS-SCCE----EEEECC-----CTTHH----HHHHHHHTTTCG------GGBCCCB-S--CSCTH
T ss_pred ccCHHHHHHHHHHHHhh-CCCE----EEEECC-----chHHH----HHHHHHHHcCCC------CeEEEeC-c--hhhHH
Confidence 99999999999998776 4444 777763 34333 344444443211 1255443 3 57899
Q ss_pred HHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHH
Q 003999 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAV 502 (780)
Q Consensus 426 aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~ 502 (780)
.+|+.||++|+||..||||++++|||+|| .|+|+|..+|..+.+. .|++++|.|++++
T Consensus 280 ~~~~~adv~v~ps~~e~~~~~~~EAma~G-------------------~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~l 340 (394)
T 2jjm_A 280 ELLAMSDLMLLLSEKESFGLVLLEAMACG-------------------VPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGV 340 (394)
T ss_dssp HHHHTCSEEEECCSCCSCCHHHHHHHHTT-------------------CCEEEECCTTSTTTCCBTTTEEEECTTCHHHH
T ss_pred HHHHhCCEEEeccccCCCchHHHHHHhcC-------------------CCEEEecCCChHHHhhcCCceEEeCCCCHHHH
Confidence 99999999999999999999999999997 4899999999888883 4899999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHHHHH
Q 003999 503 ADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLERACR 549 (780)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~~~~ 549 (780)
|++|.++++.+ +.+....++.++++ ..+++...++.+++-++++.+
T Consensus 341 a~~i~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 341 ADQAIQLLKDE-ELHRNMGERARESVYEQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp HHHHHHHHHCH-HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHcCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 99999999964 34566667788888 789999999999988877543
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.4e-21 Score=220.37 Aligned_cols=310 Identities=15% Similarity=0.119 Sum_probs=202.6
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCcEEEEEeCC----C----CChhHhhcCC--------------ChHHHHH-hhhcCC
Q 003999 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSP----F----PSSEIYRTLP--------------VRDEILR-GLLNCD 256 (780)
Q Consensus 200 DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~P----f----P~~e~~~~lp--------------~r~eil~-~ll~~D 256 (780)
|++|.||||..++|.+||++.++++.+|+.|.- + -..+++..+. ..-.+++ ++..||
T Consensus 183 dIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~~AD 262 (725)
T 3nb0_A 183 IVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHSAD 262 (725)
T ss_dssp EEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHHHSS
T ss_pred cEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHHhCC
Confidence 899999999999999999999999999999975 1 1112222121 1122333 355789
Q ss_pred EEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCc-hhHHHHHHH----HHHc
Q 003999 257 LIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLP-ATATKIKEI----EKQF 331 (780)
Q Consensus 257 ligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~-~~~~~~~~l----r~~~ 331 (780)
.|...+..|++.-. .+++.. ...| +|||||.+.|.+..... ......+++ +..+
T Consensus 263 ~ITTVS~~yA~Ei~----~Ll~r~---------------~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~ 321 (725)
T 3nb0_A 263 VFTTVSQITAFEAE----HLLKRK---------------PDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHF 321 (725)
T ss_dssp EEEESSHHHHHHHH----HHTSSC---------------CSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCHHHHHHHH----HHhcCC---------------CCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhc
Confidence 99999888876543 344321 1123 99999999987631000 011111223 3322
Q ss_pred -------CCCeEEEE-ecccc-ccCChHHHHHHHHHHHHh--CCCCCCceEEEEEEcCCCCChhHH-----HHHHHHHHH
Q 003999 332 -------DGKKLILG-IDDMD-IFKGISLKLLAMEQLLQQ--HPGMRGKVVLVQIVNPARGSGKDV-----QEAKKETYL 395 (780)
Q Consensus 332 -------~~~~vil~-Vdrld-~~KGi~~~l~A~~~ll~~--~P~~~~~vvLvqi~~p~r~~~~~~-----~~l~~ei~~ 395 (780)
.+++++++ ++|++ ..||++.+++|+.++... ..+..-.||- .|..|+...+... +.+.+++.+
T Consensus 322 ~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vva-fii~p~~~~~~~~~~l~~~~~~~~l~~ 400 (725)
T 3nb0_A 322 HGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVA-FIVMPAKNNSFTVEALKGQAEVRALEN 400 (725)
T ss_dssp TTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEE-EEECCCCEEEECHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEE-EEEeCCCCCCCchhhhcchhHHHHHHH
Confidence 25677776 79999 579999999999998643 1122222333 3445665433211 111111221
Q ss_pred HHH-----------------------------------------------------------------------------
Q 003999 396 TAK----------------------------------------------------------------------------- 398 (780)
Q Consensus 396 lv~----------------------------------------------------------------------------- 398 (780)
.+.
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r 480 (725)
T 3nb0_A 401 TVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIR 480 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHH
Confidence 111
Q ss_pred HHhhccCCCCcccEEEecCCCCHH------HHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCC
Q 003999 399 RINEVYGSPNYEPVVLIDRPVPRF------EKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPH 472 (780)
Q Consensus 399 ~In~~~g~~~~~pV~~~~~~v~~~------el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~ 472 (780)
+++-.-...+-.+|+|+.+.++.. ++..+|+.||+||+||.+||||++++||||||
T Consensus 481 ~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G------------------ 542 (725)
T 3nb0_A 481 QVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMG------------------ 542 (725)
T ss_dssp HHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTT------------------
T ss_pred hcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcC------------------
Confidence 111100112334578888888776 58999999999999999999999999999997
Q ss_pred CceEEEcCCCCccccC-C---------CcEEEC---CCCHHHHHHHHHHHH----cCCHHHHHHHHHHHhhHhhhCCHHH
Q 003999 473 TSMLVVSEFIGCSPSL-S---------GAIRVN---PWDIDAVADAMTLAI----NMRDSEKQLRHEKHYRYVSTHDVAY 535 (780)
Q Consensus 473 ~g~lV~Se~~G~~~~l-~---------~al~Vn---P~d~~~~A~ai~~aL----~m~~~er~~r~~~~~~~V~~~~~~~ 535 (780)
.|+|+|..+|+.+.+ + .|++|. |.|+++++++|.++| .+++.++..+.++.++....++|.+
T Consensus 543 -~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~ 621 (725)
T 3nb0_A 543 -VPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKR 621 (725)
T ss_dssp -CCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHH
T ss_pred -CCEEEeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHH
Confidence 589999999998766 2 378884 567777766666665 4666656555556677778899999
Q ss_pred HHHHHHHHHHHHHHh
Q 003999 536 WARSFAQDLERACRD 550 (780)
Q Consensus 536 Wa~~~l~~l~~~~~~ 550 (780)
-++.+++..+++...
T Consensus 622 iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 622 MGLEYVKARQLALRR 636 (725)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999888777554
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=241.78 Aligned_cols=310 Identities=13% Similarity=0.099 Sum_probs=211.1
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHH-------------HHhhhcCCEEEeecHHH
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEI-------------LRGLLNCDLIGFHTFDY 265 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~ei-------------l~~ll~~Dligf~t~~y 265 (780)
-|+||.|++...+++.+++++. ++|++++.|...+..-......| +.+ ...+-.||.|...|...
T Consensus 408 PDVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~-~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~ 485 (816)
T 3s28_A 408 PDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYW-KKLDDKYHFSCQFTADIFAMNHTDFIITSTFQE 485 (816)
T ss_dssp CSEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTH-HHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHH
T ss_pred CeEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchh-hhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHH
Confidence 3999999877777777777664 78999999976422110000111 011 01355799999888866
Q ss_pred HHHHHHHHHhhhCceeccCCc------e---eEEEEcCeEEEEEEeecCCCchhhhhhcCCch----hHHHHHHH-----
Q 003999 266 ARHFLSCCSRMLGLDYESKRG------H---IGLDYFGRTVYIKILPVGVHMGRLESVLNLPA----TATKIKEI----- 327 (780)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~g------~---~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~----~~~~~~~l----- 327 (780)
++.....+ + .+....+ + -++..... ++.++|+|||.+.|.+...... .......+
T Consensus 486 ~~~l~~~~----~-~y~~~~~~~~p~Lyr~~~gI~~~~~--ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~ 558 (816)
T 3s28_A 486 IAGSKETV----G-QYESHTAFTLPGLYRVVHGIDVFDP--KFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDV 558 (816)
T ss_dssp HHCCSSSC----C-TTGGGSSEEETTTEEEEESCCTTCT--TEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSC
T ss_pred HHHHHHHH----H-HhhhhhccccchhhhcccccccCCC--CEEEECCCcCHHHcCccchhhhhhhhccccccccccchh
Confidence 54321100 0 0100000 0 00111111 6899999999999976432111 01111111
Q ss_pred --HHH-----cCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCC--CCChhHHHHHHHHHHHHHH
Q 003999 328 --EKQ-----FDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPA--RGSGKDVQEAKKETYLTAK 398 (780)
Q Consensus 328 --r~~-----~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~--r~~~~~~~~l~~ei~~lv~ 398 (780)
++. -+++++|++|||+++.||+..+++|+.++.+.+|+++ |+++|... .....+..+...++.++++
T Consensus 559 ~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~----LvIvG~g~~~~~~~~e~~~~~~~L~~li~ 634 (816)
T 3s28_A 559 ENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELAN----LVVVGGDRRKESKDNEEKAEMKKMYDLIE 634 (816)
T ss_dssp CBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCE----EEEECCCTTSCCCCHHHHHHHHHHHHHHH
T ss_pred hHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeE----EEEEeCCCcccccchhhHHHHHHHHHHHH
Confidence 111 1468899999999999999999999999988777766 88887543 1222334445667777777
Q ss_pred HHhhccCCCCcccEEEec---CCCCHHHHHHHHH-hcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCc
Q 003999 399 RINEVYGSPNYEPVVLID---RPVPRFEKSAYYA-VAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTS 474 (780)
Q Consensus 399 ~In~~~g~~~~~pV~~~~---~~v~~~el~aly~-~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g 474 (780)
+.+.. ..|.+++ +.++.+|+..+|+ +|||||+||..||||++++|||||| .
T Consensus 635 ~lgL~------~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G-------------------~ 689 (816)
T 3s28_A 635 EYKLN------GQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG-------------------L 689 (816)
T ss_dssp HTTCB------BBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTT-------------------C
T ss_pred HcCCC------CcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcC-------------------C
Confidence 65432 2366554 2455689999998 6899999999999999999999997 4
Q ss_pred eEEEcCCCCccccCC---CcEEECCCCHHHHHHHHHHHH----cCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHH
Q 003999 475 MLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAI----NMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLER 546 (780)
Q Consensus 475 ~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL----~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~ 546 (780)
|+|+|..+|..+.+. .|++|+|.|++++|++|.+++ ..++ .+....++.++++ ..+++..+++++++-.++
T Consensus 690 PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d~~-~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~ 768 (816)
T 3s28_A 690 PTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPS-HWDEISKGGLQRIEEKYTWQIYSQRLLTLTGV 768 (816)
T ss_dssp CEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHCTH-HHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred CEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 899999999998883 489999999999999998877 6654 5666677788888 779999999999887665
Q ss_pred H
Q 003999 547 A 547 (780)
Q Consensus 547 ~ 547 (780)
.
T Consensus 769 ~ 769 (816)
T 3s28_A 769 Y 769 (816)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.7e-21 Score=215.44 Aligned_cols=278 Identities=13% Similarity=0.085 Sum_probs=208.5
Q ss_pred HHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHH
Q 003999 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLS 271 (780)
Q Consensus 192 ~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~ 271 (780)
++..++ |+|++|.+....+..++.+. .+.++++++|..+|....++.+-..-+ ..+-.+|.+.+.+....+.+.+
T Consensus 103 l~~~~~--Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~~ 177 (406)
T 2gek_A 103 IAEGDF--DVLHIHEPNAPSLSMLALQA-AEGPIVATFHTSTTKSLTLSVFQGILR--PYHEKIIGRIAVSDLARRWQME 177 (406)
T ss_dssp HHHHCC--SEEEEECCCSSSHHHHHHHH-EESSEEEEECCCCCSHHHHHHHHSTTH--HHHTTCSEEEESSHHHHHHHHH
T ss_pred HHhcCC--CEEEECCccchHHHHHHHHh-cCCCEEEEEcCcchhhhhHHHHHHHHH--HHHhhCCEEEECCHHHHHHHHH
Confidence 344455 89999999887765555554 368999999999887543322111111 3345799999999776666543
Q ss_pred HHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc-CCCeEEEEeccc-cccCCh
Q 003999 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDM-DIFKGI 349 (780)
Q Consensus 272 ~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~~~~vil~Vdrl-d~~KGi 349 (780)
. ++. .++ ++|+|+|.+.|.+.... ... +++++|+++||+ .+.||+
T Consensus 178 ~----~~~-----------------~~~-vi~~~v~~~~~~~~~~~-----------~~~~~~~~~i~~~G~~~~~~Kg~ 224 (406)
T 2gek_A 178 A----LGS-----------------DAV-EIPNGVDVASFADAPLL-----------DGYPREGRTVLFLGRYDEPRKGM 224 (406)
T ss_dssp H----HSS-----------------CEE-ECCCCBCHHHHHTCCCC-----------TTCSCSSCEEEEESCTTSGGGCH
T ss_pred h----cCC-----------------CcE-EecCCCChhhcCCCchh-----------hhccCCCeEEEEEeeeCccccCH
Confidence 1 111 147 89999999888653211 011 256899999999 999999
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHH
Q 003999 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (780)
Q Consensus 350 ~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~ 429 (780)
..+++|+.++.+++|+++ |+.+|. +++ ++++ ++++++. ..|. +.+.++.+++..+|+
T Consensus 225 ~~li~a~~~l~~~~~~~~----l~i~G~-----~~~-~~l~----~~~~~~~--------~~v~-~~g~~~~~~~~~~~~ 281 (406)
T 2gek_A 225 AVLLAALPKLVARFPDVE----ILIVGR-----GDE-DELR----EQAGDLA--------GHLR-FLGQVDDATKASAMR 281 (406)
T ss_dssp HHHHHHHHHHHTTSTTCE----EEEESC-----SCH-HHHH----HHTGGGG--------GGEE-ECCSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeE----EEEEcC-----CcH-HHHH----HHHHhcc--------CcEE-EEecCCHHHHHHHHH
Confidence 999999999998888776 777763 333 3333 3333221 1365 467999999999999
Q ss_pred hcceeeeccC-CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHH
Q 003999 430 VAECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (780)
Q Consensus 430 ~ADv~vvtS~-rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~a 505 (780)
.||++|+||. .||||++++|||+|| .|+|+|..+|..+.+. .|++++|.|+++++++
T Consensus 282 ~adv~v~ps~~~e~~~~~~~Ea~a~G-------------------~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~ 342 (406)
T 2gek_A 282 SADVYCAPHLGGESFGIVLVEAMAAG-------------------TAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAA 342 (406)
T ss_dssp HSSEEEECCCSCCSSCHHHHHHHHHT-------------------CEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHH
T ss_pred HCCEEEecCCCCCCCchHHHHHHHcC-------------------CCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHH
Confidence 9999999997 999999999999997 5899999988887773 4899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHHHHh
Q 003999 506 MTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRD 550 (780)
Q Consensus 506 i~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~~~~ 550 (780)
|.++++.++ .+....++.++++..+++...++.+++-+++..+.
T Consensus 343 i~~l~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 343 LIGILEDDQ-LRAGYVARASERVHRYDWSVVSAQIMRVYETVSGA 386 (406)
T ss_dssp HHHHHHCHH-HHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHcCHH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 999999654 45666677888888999999999999888876543
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.83 E-value=9.7e-20 Score=181.99 Aligned_cols=189 Identities=18% Similarity=0.192 Sum_probs=146.6
Q ss_pred eecCCCchhhh--hhcCCchhHHHHHHHHHHc--CCCeEEEEecccc-ccCChHHHHHHHHHHH--HhCCCCCCceEEEE
Q 003999 302 LPVGVHMGRLE--SVLNLPATATKIKEIEKQF--DGKKLILGIDDMD-IFKGISLKLLAMEQLL--QQHPGMRGKVVLVQ 374 (780)
Q Consensus 302 ~P~GId~~~~~--~~~~~~~~~~~~~~lr~~~--~~~~vil~Vdrld-~~KGi~~~l~A~~~ll--~~~P~~~~~vvLvq 374 (780)
+|+|||.+.|. +.. ....+....+++++ +++++|+++||+. +.||+..+++|+..+. +++|+++ |+.
T Consensus 2 ipngvd~~~f~~~~~~--~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~----l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLT--GSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMR----FII 75 (200)
T ss_dssp ---CCCTTTSSGGGSC--SCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEE----EEE
T ss_pred CCCccChhhccccccc--cchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeE----EEE
Confidence 68999999997 532 11223345677777 4678999999999 9999999999999997 7777755 877
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcc
Q 003999 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 375 i~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
+|. ++ .+...++++++++.+ .|+++.+.++.+++..+|+.||++|+||..||||++++|||+||
T Consensus 76 ~G~-----~~--~~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G 139 (200)
T 2bfw_A 76 IGK-----GD--PELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG 139 (200)
T ss_dssp ECC-----BC--HHHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT
T ss_pred ECC-----CC--hHHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCC
Confidence 763 22 122345555555443 37753789999999999999999999999999999999999997
Q ss_pred cCCCccccccccCCCCCCCceEEEcCCCCccccCC--CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhC
Q 003999 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTH 531 (780)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~ 531 (780)
.|+|+|..+|..+.+. .|++++|.|+++++++|.++++|.+++++.+.++.++++.++
T Consensus 140 -------------------~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~f 199 (200)
T 2bfw_A 140 -------------------AIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 199 (200)
T ss_dssp -------------------CEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred -------------------CCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 5899999988888772 489999999999999999999966666666667777777554
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=197.09 Aligned_cols=243 Identities=13% Similarity=-0.016 Sum_probs=182.9
Q ss_pred HHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFL 270 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl 270 (780)
+++..++ |+|++|.++..++. .+..+.+ ++++|..++... .+|.|.+.+....+.+.
T Consensus 79 ~l~~~~~--Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~----------------~~d~ii~~S~~~~~~~~ 135 (342)
T 2iuy_A 79 WLRTADV--DVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPV----------------NPVGCTYSSRAQRAHCG 135 (342)
T ss_dssp HHHHCCC--SEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCS----------------CCTTEEESCHHHHHHTT
T ss_pred HHHhcCC--CEEEECCchhhHHH----HhhcCCC-EEEecCCCCCcc----------------cceEEEEcCHHHHHHHh
Confidence 3444555 89999998765432 3345788 899999876421 18888888875554432
Q ss_pred HHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChH
Q 003999 271 SCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGIS 350 (780)
Q Consensus 271 ~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~ 350 (780)
+ ..++.++|+|||.+.|.+... ...++++|+++||+.+.||+.
T Consensus 136 ~------------------------~~~~~vi~ngvd~~~~~~~~~-------------~~~~~~~i~~vG~~~~~Kg~~ 178 (342)
T 2iuy_A 136 G------------------------GDDAPVIPIPVDPARYRSAAD-------------QVAKEDFLLFMGRVSPHKGAL 178 (342)
T ss_dssp C------------------------CTTSCBCCCCBCGGGSCCSTT-------------CCCCCSCEEEESCCCGGGTHH
T ss_pred c------------------------CCceEEEcCCCChhhcCcccc-------------cCCCCCEEEEEeccccccCHH
Confidence 1 013567899999988764321 124567899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHh
Q 003999 351 LKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAV 430 (780)
Q Consensus 351 ~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ 430 (780)
.+++|++++ +++ |+.+|. +++. .++++++++++ ..|+ +.|.++.+++.++|+.
T Consensus 179 ~li~a~~~~-----~~~----l~i~G~-----g~~~----~~l~~~~~~~~--------~~v~-~~g~~~~~~l~~~~~~ 231 (342)
T 2iuy_A 179 EAAAFAHAC-----GRR----LVLAGP-----AWEP----EYFDEITRRYG--------STVE-PIGEVGGERRLDLLAS 231 (342)
T ss_dssp HHHHHHHHH-----TCC----EEEESC-----CCCH----HHHHHHHHHHT--------TTEE-ECCCCCHHHHHHHHHH
T ss_pred HHHHHHHhc-----CcE----EEEEeC-----cccH----HHHHHHHHHhC--------CCEE-EeccCCHHHHHHHHHh
Confidence 999999986 444 777763 2332 33444555543 1366 4678999999999999
Q ss_pred cceeeeccC----------CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C----CcEEEC
Q 003999 431 AECCIVNAV----------RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S----GAIRVN 495 (780)
Q Consensus 431 ADv~vvtS~----------rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~----~al~Vn 495 (780)
||++|+||. .||||++++|||+|| .|+|+|..+|..+.+ . .|++++
T Consensus 232 adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G-------------------~PvI~s~~~~~~e~~~~~~~~~g~~~~ 292 (342)
T 2iuy_A 232 AHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSG-------------------TPVVGTGNGCLAEIVPSVGEVVGYGTD 292 (342)
T ss_dssp CSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTT-------------------CCEEECCTTTHHHHGGGGEEECCSSSC
T ss_pred CCEEEECCcccccccccccccCccHHHHHHHhcC-------------------CCEEEcCCCChHHHhcccCCCceEEcC
Confidence 999999999 899999999999997 489999998888877 3 389999
Q ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHHHHHHHHHH
Q 003999 496 PWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLERACR 549 (780)
Q Consensus 496 P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l~~l~~~~~ 549 (780)
| |++++|++|.++++ .++.++++ ..+++...++.+++-++++.+
T Consensus 293 ~-d~~~l~~~i~~l~~---------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 293 F-APDEARRTLAGLPA---------SDEVRRAAVRLWGHVTIAERYVEQYRRLLA 337 (342)
T ss_dssp C-CHHHHHHHHHTSCC---------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHT
T ss_pred C-CHHHHHHHHHHHHH---------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 9 99999999999987 23345555 678999999999988887654
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-20 Score=206.26 Aligned_cols=227 Identities=15% Similarity=0.143 Sum_probs=173.7
Q ss_pred cCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--
Q 003999 254 NCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-- 331 (780)
Q Consensus 254 ~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-- 331 (780)
.+|.|.+.+...++.|.+. +|.. ..++.++|+|+|.+.|.+.... .....+++++
T Consensus 136 ~~d~ii~~s~~~~~~~~~~----~~~~---------------~~~~~vi~ngv~~~~~~~~~~~----~~~~~~~~~~~~ 192 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQKH----YQTE---------------PERFQILPPGIYPDRKYSEQIP----NSREIYRQKNGI 192 (374)
T ss_dssp CCCEEEESCHHHHHHHHHH----HCCC---------------GGGEEECCCCCCGGGSGGGSCT----THHHHHHHHTTC
T ss_pred CCcEEEEcCHHHHHHHHHH----hCCC---------------hhheEEecCCcCHHhcCcccch----hHHHHHHHHhCC
Confidence 5899999998777776532 2321 1247789999999988764321 1234567777
Q ss_pred -CCCeEEEEeccccccCChHHHHHHHHHHHHh-CCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 003999 332 -DGKKLILGIDDMDIFKGISLKLLAMEQLLQQ-HPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (780)
Q Consensus 332 -~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~ 409 (780)
+++++++++||+.+.||+..+++|++.+.++ +|+++ |+.+|.. +. +++++++++.+..
T Consensus 193 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~g-----~~-----~~~~~~~~~~~~~------ 252 (374)
T 2iw1_A 193 KEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTL----LFVVGQD-----KP-----RKFEALAEKLGVR------ 252 (374)
T ss_dssp CTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEE----EEEESSS-----CC-----HHHHHHHHHHTCG------
T ss_pred CCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCceE----EEEEcCC-----CH-----HHHHHHHHHcCCC------
Confidence 4678999999999999999999999988766 46554 8877742 21 2344455444311
Q ss_pred ccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-
Q 003999 410 EPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL- 488 (780)
Q Consensus 410 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 488 (780)
..|++++ . .+++..+|+.||++|+||..||||++++|||+|| .|+|+|..+|..+.+
T Consensus 253 ~~v~~~g-~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G-------------------~Pvi~~~~~~~~e~i~ 310 (374)
T 2iw1_A 253 SNVHFFS-G--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG-------------------LPVLTTAVCGYAHYIA 310 (374)
T ss_dssp GGEEEES-C--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT-------------------CCEEEETTSTTTHHHH
T ss_pred CcEEECC-C--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCC-------------------CCEEEecCCCchhhhc
Confidence 1377664 3 5789999999999999999999999999999997 489999999988877
Q ss_pred --CCcEEEC-CCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHH
Q 003999 489 --SGAIRVN-PWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (780)
Q Consensus 489 --~~al~Vn-P~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~ 546 (780)
..|++++ |.|++++|++|.++++.+ +.++...++.++++.++++..|++.+.+-++.
T Consensus 311 ~~~~g~~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 311 DANCGTVIAEPFSQEQLNEVLRKALTQS-PLRMAWAENARHYADTQDLYSLPEKAADIITG 370 (374)
T ss_dssp HHTCEEEECSSCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHC
T ss_pred cCCceEEeCCCCCHHHHHHHHHHHHcCh-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 2589998 999999999999999964 35666667789999999999999988876653
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-18 Score=180.00 Aligned_cols=174 Identities=21% Similarity=0.211 Sum_probs=124.4
Q ss_pred ceEEeCCCCCCCCCCC--CCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCc
Q 003999 592 RAIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~--~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~ 669 (780)
|+|++|+||||++... .++.++++++++|++|+++ | .|+|+|||++..+.+++..+ +++|++||++++..+ .
T Consensus 2 kli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~-g-~v~iaTGR~~~~~~~~~~~l--~~~I~~nGa~i~~~~--~ 75 (239)
T 1u02_A 2 SLIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKER-F-DTYIVTGRSPEEISRFLPLD--INMICYHGACSKING--Q 75 (239)
T ss_dssp CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHH-S-EEEEECSSCHHHHHHHSCSS--CEEEEGGGTEEEETT--E
T ss_pred eEEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcC-C-CEEEEeCCCHHHHHHHhccc--hheEEECCEEEeeCC--e
Confidence 7999999999998532 2457899999999999996 8 99999999999999999877 789999999998832 3
Q ss_pred eEecCC-CcChhH-HHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEEEcCe
Q 003999 670 WETNHL-GADLEW-KKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQH 747 (780)
Q Consensus 670 w~~~~~-~~d~~w-k~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~ 747 (780)
+..... .....+ ++.+..+++... ..++.+++.++..+.++|+..++ +.....+++.+.+.+. .++.+.++..
T Consensus 76 ~~~~~~~~~~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~---~~~~~~~~~~ 150 (239)
T 1u02_A 76 IVYNNGSDRFLGVFDRIYEDTRSWVS-DFPGLRIYRKNLAVLYHLGLMGA-DMKPKLRSRIEEIARI---FGVETYYGKM 150 (239)
T ss_dssp EEECTTGGGGHHHHHHHHHHHTTHHH-HSTTCEEEEETTEEEEECTTSCS-TTHHHHHHHHHHHHHH---HTCEEEECSS
T ss_pred eeecccccccchhhHHHHHHHHHHHh-hCCCcEEEecCCEEEEEcCCCCh-hHHHHHHHHHHHHhcc---CCcEEEeCCc
Confidence 321000 001112 233455554443 35678888888888888887543 2111223333444432 2356778999
Q ss_pred EEEEEeCCCCHHHHHHHHHHHcCCCCCccccCC
Q 003999 748 IVEVKPQVLRPSSISVSLSLSVCVRARACKLDD 780 (780)
Q Consensus 748 ~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~~~~ 780 (780)
++||.|+++|||.|+++|+++++ -+.+||
T Consensus 151 ~lei~~~~~~Kg~al~~l~~~~g----via~GD 179 (239)
T 1u02_A 151 IIELRVPGVNKGSAIRSVRGERP----AIIAGD 179 (239)
T ss_dssp EEEEECTTCCHHHHHHHHHTTSC----EEEEES
T ss_pred EEEEEcCCCCHHHHHHHHHhhCC----eEEEeC
Confidence 99999999999999999999998 444554
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.76 E-value=6.1e-18 Score=163.87 Aligned_cols=161 Identities=10% Similarity=0.016 Sum_probs=120.7
Q ss_pred CeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEE
Q 003999 334 KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVV 413 (780)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~ 413 (780)
+.+|+++||+++.||+..+++|+.++ +++|++ .|+.+|. +++.+ ++++++.+.+. .|.
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~~~----~l~i~G~-----g~~~~----~~~~~~~~~~~--------~v~ 59 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQDI----VLLLKGK-----GPDEK----KIKLLAQKLGV--------KAE 59 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGGGE----EEEEECC-----STTHH----HHHHHHHHHTC--------EEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCCCe----EEEEEeC-----CccHH----HHHHHHHHcCC--------eEE
Confidence 56899999999999999999999986 445554 4887763 34333 34444444432 244
Q ss_pred EecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCc-eEEEcC-CCCccccC-CC
Q 003999 414 LIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTS-MLVVSE-FIGCSPSL-SG 490 (780)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g-~lV~Se-~~G~~~~l-~~ 490 (780)
+ +.++.+++..+|+.||++|+||..||||++++|||+|| . |+|++. .+|..+.+ ++
T Consensus 60 -~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G-------------------~vPvi~~~~~~~~~~~~~~~ 118 (166)
T 3qhp_A 60 -F-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVG-------------------IVPVIANSPLSATRQFALDE 118 (166)
T ss_dssp -C-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTT-------------------CCEEEECCTTCGGGGGCSSG
T ss_pred -E-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcC-------------------CCcEEeeCCCCchhhhccCC
Confidence 5 88999999999999999999999999999999999996 4 777744 44555555 45
Q ss_pred cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHH
Q 003999 491 AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (780)
Q Consensus 491 al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~ 538 (780)
+.+++|.|+++++++|.++++.+ +.+....++.++++.++++..+++
T Consensus 119 ~~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 119 RSLFEPNNAKDLSAKIDWWLENK-LERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp GGEECTTCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHC------
T ss_pred ceEEcCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHCChhhhhc
Confidence 67999999999999999999954 456666667788888788776654
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.6e-16 Score=178.00 Aligned_cols=160 Identities=6% Similarity=-0.017 Sum_probs=121.8
Q ss_pred EEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccc-cccCChHHHHHHHHHHHHhCCCCCCceEEEEEE
Q 003999 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDM-DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIV 376 (780)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrl-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~ 376 (780)
.+.++|+|+|.+.|.... ...++++.|++++|+ .+.||+..+++||+.+.+++|+. .++.|+.+|
T Consensus 218 ~~~~i~~g~d~~~~~~~~-------------~~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG 283 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYIN-------------DKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVG 283 (413)
T ss_dssp EEEEECCCCCHHHHTTTT-------------SCCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEE
T ss_pred ceEEeCCCcCchhhcccc-------------cccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEc
Confidence 467889999987664210 012456789999996 68999999999999999888861 023488777
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccC
Q 003999 377 NPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQG 456 (780)
Q Consensus 377 ~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~ 456 (780)
.... . .+.+.. ..|+| .|.++.+|+.++|+.||+||+||..||||++++||||||
T Consensus 284 ~~~~-~-------------------~~l~~~--~~v~f-~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G-- 338 (413)
T 2x0d_A 284 EKHK-D-------------------IALGKG--IHLNS-LGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFG-- 338 (413)
T ss_dssp SCCC-C-------------------EEEETT--EEEEE-EESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTT--
T ss_pred CCch-h-------------------hhcCCc--CcEEE-cCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCC--
Confidence 4221 0 011211 23664 568999999999999999999999999999999999997
Q ss_pred CCccccccccCCCCCCCceEEEcCCCCccccCC---CcEEECCCCHHHHHHHHHHHHcCCH
Q 003999 457 TPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRD 514 (780)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al~VnP~d~~~~A~ai~~aL~m~~ 514 (780)
.|+|++ .+|+.+.+. +|++|+|.|++++|++|.+++++++
T Consensus 339 -----------------~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 339 -----------------LRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFN 381 (413)
T ss_dssp -----------------CEEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC
T ss_pred -----------------CcEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHH
Confidence 477774 457766662 4899999999999999999998664
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-16 Score=168.14 Aligned_cols=183 Identities=20% Similarity=0.120 Sum_probs=119.6
Q ss_pred HHHHhccCceEEeCCCCCCCCCCCCCC-CCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccE
Q 003999 584 SAYRKTERRAIFLDYDGTVVPETSIIK-SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYF 661 (780)
Q Consensus 584 ~~y~~a~~rlI~lD~DGTL~~~~~~~~-~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ 661 (780)
.+|...+.|+|+||+||||++ .++ .++++++++|++|++. |+.|+++|||+...+..++..+. ..++|++||+.
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~~i~~~~~~al~~l~~~-G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~ 89 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVK---DGSLLIDPEYMSVIDRLIDK-GIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTV 89 (283)
T ss_dssp -----CCCCEEEECCBTTTBS---TTCSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTE
T ss_pred hhhhccCceEEEEeCcCCCCC---CCCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcE
Confidence 478999999999999999998 555 7999999999999985 99999999999999999988763 45899999999
Q ss_pred EeeCCCCceEecCCCcChhHHHHHHHHHHHHHhc----------CCCceeecccceE--------EEeeccCC-------
Q 003999 662 IRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEA----------TDGSNIEIKESAL--------VWHHQDAD------- 716 (780)
Q Consensus 662 ir~~~~~~w~~~~~~~d~~wk~~v~~i~~~~~e~----------t~gs~iE~k~~~l--------~~hyr~ad------- 716 (780)
+...+...+.. ..+. +.+.++++.+.+. ..+.+++.....+ ...+...+
T Consensus 90 i~~~~~~i~~~---~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 163 (283)
T 3dao_A 90 VRTPKEILKTY---PMDE---DIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDR 163 (283)
T ss_dssp EECSSCEEEEC---CCCH---HHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCC
T ss_pred EEECCEEEEEe---cCCH---HHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCc
Confidence 99854333332 2342 3355555554433 1122221110000 00000000
Q ss_pred CC------c-ccccHHHHHHHHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 717 PD------F-GSCQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 717 ~d------~-~~~qa~el~~~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.. + ......++.+.+.+.+.+ .+. +.++..++||.|+++|||.|+++|++++|+++++|.
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~i 231 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPAWNK-KAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVC 231 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHHHTT-TEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEE
T ss_pred cCceEEEEEcChHHHHHHHHHHHHHhcC-CEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEE
Confidence 00 0 011123334444444443 354 567899999999999999999999999999997764
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-16 Score=174.65 Aligned_cols=274 Identities=13% Similarity=0.111 Sum_probs=175.5
Q ss_pred HHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhh--cCCEEEeecHHHHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIGFHTFDYARH 268 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~Dligf~t~~y~~~ 268 (780)
+++..+| |+|++|......++..+..+..++|+.++.|.. .+...+. ++...+++.++ .+|.+...+....+.
T Consensus 90 ~l~~~~p--Dvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 164 (375)
T 3beo_A 90 VMKEAKP--DIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL-RTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSATN 164 (375)
T ss_dssp HHHHHCC--SEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC-CCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred HHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-ccccccC--CChhHhhhhHHhhhhheeeCCCHHHHHH
Confidence 4455677 899999764333333232334578888765543 2211121 33344555544 389998888776665
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecC-CCchhhhhhcCCchhHHHHHHHHHHcCC-CeEEEEecccccc
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVG-VHMGRLESVLNLPATATKIKEIEKQFDG-KKLILGIDDMDIF 346 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~G-Id~~~~~~~~~~~~~~~~~~~lr~~~~~-~~vil~Vdrld~~ 346 (780)
+.+ .|.. ..++.++|+| +|...+....... .++++++++ +.++++++|+.+.
T Consensus 165 ~~~-----~g~~---------------~~~i~vi~n~~~d~~~~~~~~~~~------~~~~~~~~~~~~vl~~~gr~~~~ 218 (375)
T 3beo_A 165 LQK-----ENKD---------------ESRIFITGNTAIDALKTTVKETYS------HPVLEKLGNNRLVLMTAHRRENL 218 (375)
T ss_dssp HHH-----TTCC---------------GGGEEECCCHHHHHHHHHCCSSCC------CHHHHTTTTSEEEEEECCCGGGT
T ss_pred HHH-----cCCC---------------cccEEEECChhHhhhhhhhhhhhh------HHHHHhccCCCeEEEEecccccc
Confidence 542 2331 1146788999 8877664321000 124455543 4567789999986
Q ss_pred -CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 347 -KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 347 -KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
||+..+++|++++.+++|+++ ++. +. +++ .+++++++++++ . ...|+++ +.++..++.
T Consensus 219 ~K~~~~li~a~~~l~~~~~~~~----~i~-~~-----g~~-~~~~~~~~~~~~---~------~~~v~~~-g~~~~~~~~ 277 (375)
T 3beo_A 219 GEPMRNMFRAIKRLVDKHEDVQ----VVY-PV-----HMN-PVVRETANDILG---D------YGRIHLI-EPLDVIDFH 277 (375)
T ss_dssp THHHHHHHHHHHHHHHHCTTEE----EEE-EC-----CSC-HHHHHHHHHHHT---T------CTTEEEE-CCCCHHHHH
T ss_pred hhHHHHHHHHHHHHHhhCCCeE----EEE-eC-----CCC-HHHHHHHHHHhh---c------cCCEEEe-CCCCHHHHH
Confidence 999999999999988888764 443 31 111 234444544421 1 0136654 578888999
Q ss_pred HHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCC-CCccccC-C-CcEEECCCCHHHH
Q 003999 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF-IGCSPSL-S-GAIRVNPWDIDAV 502 (780)
Q Consensus 426 aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l-~-~al~VnP~d~~~~ 502 (780)
.+|+.||++|.|| |.+++|||+|| .|+|+|.. +|..+.+ . .|++|+| |++++
T Consensus 278 ~~~~~ad~~v~~s-----g~~~lEA~a~G-------------------~Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~l 332 (375)
T 3beo_A 278 NVAARSYLMLTDS-----GGVQEEAPSLG-------------------VPVLVLRDTTERPEGIEAGTLKLAGT-DEETI 332 (375)
T ss_dssp HHHHTCSEEEECC-----HHHHHHHHHHT-------------------CCEEECSSCCSCHHHHHTTSEEECCS-CHHHH
T ss_pred HHHHhCcEEEECC-----CChHHHHHhcC-------------------CCEEEecCCCCCceeecCCceEEcCC-CHHHH
Confidence 9999999999999 56799999997 48888854 6766655 3 4888887 99999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHH
Q 003999 503 ADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (780)
Q Consensus 503 A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~ 542 (780)
|++|.++++.++ .++.+.++.+++...+++.+.++.+.+
T Consensus 333 a~~i~~ll~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 333 FSLADELLSDKE-AHDKMSKASNPYGDGRASERIVEAILK 371 (375)
T ss_dssp HHHHHHHHHCHH-HHHHHCCCCCTTCCSCHHHHHHHHHHH
T ss_pred HHHHHHHHhChH-hHhhhhhcCCCCCCCcHHHHHHHHHHH
Confidence 999999998653 344433445666666666665555443
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=4.8e-16 Score=170.76 Aligned_cols=280 Identities=15% Similarity=0.111 Sum_probs=175.2
Q ss_pred HHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhh-h-cCCEEEeecHHHHH
Q 003999 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGL-L-NCDLIGFHTFDYAR 267 (780)
Q Consensus 190 ~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~l-l-~~Dligf~t~~y~~ 267 (780)
++++..+| |+|++|+.....++..+-.+..++|+.+..|... +...+. ++...+.+.+ . .+|.+...+....+
T Consensus 80 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~ 154 (384)
T 1vgv_A 80 PILAEFKP--DVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-TGDLYS--PWPEEANRTLTGHLAMYHFSPTETSRQ 154 (384)
T ss_dssp HHHHHHCC--SEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-CSCTTS--STTHHHHHHHHHTTCSEEEESSHHHHH
T ss_pred HHHHHhCC--CEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-cccccC--CCchHhhHHHHHhhccEEEcCcHHHHH
Confidence 34555677 8999998533344444433455788887777432 111111 2223333333 2 38999888877666
Q ss_pred HHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCC-CchhhhhhcCCchhHHHHHHHHHHcC----CC-eEEEEec
Q 003999 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGV-HMGRLESVLNLPATATKIKEIEKQFD----GK-KLILGID 341 (780)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GI-d~~~~~~~~~~~~~~~~~~~lr~~~~----~~-~vil~Vd 341 (780)
.|.+ .|... .++.++|+|+ |...+..... +.......++++++. ++ .+++++|
T Consensus 155 ~l~~-----~g~~~---------------~~i~vi~n~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~~~g 213 (384)
T 1vgv_A 155 NLLR-----ENVAD---------------SRIFITGNTVIDALLWVRDQV-MSSDKLRSELAANYPFIDPDKKMILVTGH 213 (384)
T ss_dssp HHHH-----TTCCG---------------GGEEECCCHHHHHHHHHHHHT-TTCHHHHHHHHTTCTTCCTTSEEEEEECC
T ss_pred HHHH-----cCCCh---------------hhEEEeCChHHHHHHhhhhcc-ccchhhhHHHHHhccccCCCCCEEEEEeC
Confidence 6542 23321 1356788884 4332221100 000011234556532 34 5788999
Q ss_pred ccccc-CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCC
Q 003999 342 DMDIF-KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420 (780)
Q Consensus 342 rld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~ 420 (780)
|+.+. ||+..+++|+.++.+++|+++ |+.++.+ ++ +++++++++++. ...|+++ +.++
T Consensus 214 r~~~~~kg~~~li~a~~~l~~~~~~~~----l~i~~g~----~~---~~~~~l~~~~~~---------~~~v~~~-g~~~ 272 (384)
T 1vgv_A 214 RRESFGRGFEEICHALADIATTHQDIQ----IVYPVHL----NP---NVREPVNRILGH---------VKNVILI-DPQE 272 (384)
T ss_dssp CBSSCCHHHHHHHHHHHHHHHHCTTEE----EEEECCB----CH---HHHHHHHHHHTT---------CTTEEEE-CCCC
T ss_pred CccccchHHHHHHHHHHHHHhhCCCeE----EEEEcCC----CH---HHHHHHHHHhhc---------CCCEEEe-CCCC
Confidence 99987 999999999999999888765 6544321 22 233444444321 1247654 5778
Q ss_pred HHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCC-CCccccC--CCcEEECCC
Q 003999 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF-IGCSPSL--SGAIRVNPW 497 (780)
Q Consensus 421 ~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~~~l--~~al~VnP~ 497 (780)
.+++..+|+.||++|.|| |.+.+|||+|| .|+|+|.. +|+.+.+ +.|++|+|
T Consensus 273 ~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G-------------------~PvI~~~~~~~~~e~v~~g~g~lv~~- 327 (384)
T 1vgv_A 273 YLPFVWLMNHAWLILTDS-----GGIQEEAPSLG-------------------KPVLVMRDTTERPEAVTAGTVRLVGT- 327 (384)
T ss_dssp HHHHHHHHHHCSEEEESS-----STGGGTGGGGT-------------------CCEEEESSCCSCHHHHHHTSEEEECS-
T ss_pred HHHHHHHHHhCcEEEECC-----cchHHHHHHcC-------------------CCEEEccCCCCcchhhhCCceEEeCC-
Confidence 899999999999999999 44589999997 48899987 6666555 35899988
Q ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHH
Q 003999 498 DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (780)
Q Consensus 498 d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~ 542 (780)
|++++|++|.++|++++ .++.+.++.+++...+++.+.++.+.+
T Consensus 328 d~~~la~~i~~ll~d~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~ 371 (384)
T 1vgv_A 328 DKQRIVEEVTRLLKDEN-EYQAMSRAHNPYGDGQACSRILEALKN 371 (384)
T ss_dssp SHHHHHHHHHHHHHCHH-HHHHHHSSCCTTCCSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhChH-HHhhhhhccCCCcCCCHHHHHHHHHHH
Confidence 99999999999998653 344444445666656666655554443
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-16 Score=166.37 Aligned_cols=179 Identities=16% Similarity=0.110 Sum_probs=118.7
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc-C--CCceEEecCccEEeeCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP-C--EMLGIAAEHGYFIRWNK 666 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~-l--~~lgliaenG~~ir~~~ 666 (780)
+.|+|++|+||||++ .++.++++++++|++|++. |+.|+|+|||++..+.+.++. + ...++||+||++++..+
T Consensus 3 ~~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~~-g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i~~NGa~i~~~~ 78 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTP---PRLCQTDEMRALIKRARGA-GFCVGTVGGSDFAKQVEQLGRDVLTQFDYVFAENGLLAYRNG 78 (246)
T ss_dssp CSEEEEECSBTTTBS---TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHCTTHHHHCSEEEEGGGTEEEETT
T ss_pred CceEEEEeCcCCcCC---CCCccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHhhhhccccCCEEEECCCcEEEECC
Confidence 368999999999999 6778999999999999994 999999999999999888873 1 12478999999999875
Q ss_pred CCceEecCC-CcChhHHHHHHHHHHHHH-----hcCCCceeecccceEEEe--eccCCC----Cccccc-----HHHHHH
Q 003999 667 TSEWETNHL-GADLEWKKIVEPVMRSYT-----EATDGSNIEIKESALVWH--HQDADP----DFGSCQ-----AKELLD 729 (780)
Q Consensus 667 ~~~w~~~~~-~~d~~wk~~v~~i~~~~~-----e~t~gs~iE~k~~~l~~h--yr~ad~----d~~~~q-----a~el~~ 729 (780)
+..|....+ ..+.++...+...++.+. ....+.|++.+...+.+. .+.... .+..+. .+++.+
T Consensus 79 ~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (246)
T 3f9r_A 79 LEIHRQSLLNALGNDRIVKFVKKTLRLIADLDIPVQRGTFVEYRNGMINVSPIGRNCSQAERDEFEVYDNEHRVRASLIA 158 (246)
T ss_dssp EEEEECCHHHHTCHHHHHHHHHHHHHHHHTCCCSCCCSCCEEECSSCEEECSSCTTSCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred EEEEEeeccccCCHHHHHHHHHHHHhhhhceeeecCCceEEEeecceeccccccccCchhhceeeeEecccchHHHHHHH
Confidence 434443211 123333333333333222 124567877766544432 111110 011110 123344
Q ss_pred HHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc
Q 003999 730 HLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARAC 776 (780)
Q Consensus 730 ~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~ 776 (780)
.|.+.+.+..+. +.+|..++||.|+|+|||.|+++|++ ++++|
T Consensus 159 ~l~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~al~~L~~----~~~ev 202 (246)
T 3f9r_A 159 ELENSFPDFGLKYSIGGQISFDVFPVGWDKTYCLQFVED----DFEEI 202 (246)
T ss_dssp HHHHHCGGGCEEEEEETTTEEEEEETTCSGGGGGGGTTT----TCSEE
T ss_pred HHHhhCcCCcEEEEecCCeEEEEEeCCCCHHHHHHHHHc----CcccE
Confidence 455544444465 56899999999999999999999999 55554
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.1e-16 Score=167.68 Aligned_cols=184 Identities=11% Similarity=0.060 Sum_probs=114.5
Q ss_pred HHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEE
Q 003999 584 SAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFI 662 (780)
Q Consensus 584 ~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~i 662 (780)
.+|+..+.|+|+||+||||++ ..+.++++++++|++|++. |+.|+|+|||+...+.+++..++ ..++|++||+.+
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i 89 (285)
T 3pgv_A 14 NLYFQGMYQVVASDLDGTLLS---PDHFLTPYAKETLKLLTAR-GINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARV 89 (285)
T ss_dssp -------CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHTT-TCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEE
T ss_pred cccccCcceEEEEeCcCCCCC---CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEE
Confidence 589999999999999999999 6778999999999999984 99999999999999999887653 356899999999
Q ss_pred eeCCCCceEecCCCcChhHHHHHHHHHHHHHhc---------CCCceeecccceEEEee-------ccCCC------Cc-
Q 003999 663 RWNKTSEWETNHLGADLEWKKIVEPVMRSYTEA---------TDGSNIEIKESALVWHH-------QDADP------DF- 719 (780)
Q Consensus 663 r~~~~~~w~~~~~~~d~~wk~~v~~i~~~~~e~---------t~gs~iE~k~~~l~~hy-------r~ad~------d~- 719 (780)
....+..... ...+ ++.+.++++.+... ..+.+.......+...+ ...+. ..
T Consensus 90 ~~~~~~~l~~--~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 164 (285)
T 3pgv_A 90 HDSDGQQIFA--HNLD---RDIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGIS 164 (285)
T ss_dssp ECTTSCEEEE--CCCC---HHHHHHHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEE
T ss_pred ECCCCCEEEe--cCCC---HHHHHHHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCce
Confidence 8654332221 1233 34455555522111 11111111000000000 00000 00
Q ss_pred ------cc-ccHHHHHHHHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 ------GS-CQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 ------~~-~qa~el~~~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.. ....++.+.+.+.+.. .+. +.++..++||.|+++|||.|+++|++++|+++++|.
T Consensus 165 ki~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~i 229 (285)
T 3pgv_A 165 KVFFTCEDHEHLLPLEQAMNARWGD-RVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCI 229 (285)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHHGG-GEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred EEEEeCCCHHHHHHHHHHHHHHhcC-CEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEE
Confidence 00 1123344444443332 244 456789999999999999999999999999997764
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=4.5e-16 Score=163.39 Aligned_cols=183 Identities=19% Similarity=0.182 Sum_probs=111.0
Q ss_pred HHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc----C-CCceEEec
Q 003999 583 VSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP----C-EMLGIAAE 657 (780)
Q Consensus 583 ~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~----l-~~lgliae 657 (780)
..+|+..+.|+|++|+||||++ .++.++++++++|++|++ . +.|+|+|||++..+.+.++. + ...++|++
T Consensus 5 ~~~~~~~~~kli~~DlDGTLl~---~~~~is~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~ 79 (262)
T 2fue_A 5 AQAARRKERVLCLFDVDGTLTP---ARQKIDPEVAAFLQKLRS-R-VQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAE 79 (262)
T ss_dssp --------CEEEEEESBTTTBS---TTSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEG
T ss_pred cccccccCeEEEEEeCccCCCC---CCCcCCHHHHHHHHHHHh-C-CEEEEEcCCCHHHHHHHHhhhhcccccCCeEEEC
Confidence 3567888899999999999999 667899999999999987 5 99999999999999888864 1 12468999
Q ss_pred CccEEeeCCCCceEecCC-CcChhHHHHHHHHHHHHHhc--------CCCceeecccceEEEe-e-ccCCCC----ccc-
Q 003999 658 HGYFIRWNKTSEWETNHL-GADLEWKKIVEPVMRSYTEA--------TDGSNIEIKESALVWH-H-QDADPD----FGS- 721 (780)
Q Consensus 658 nG~~ir~~~~~~w~~~~~-~~d~~wk~~v~~i~~~~~e~--------t~gs~iE~k~~~l~~h-y-r~ad~d----~~~- 721 (780)
||++++..++..|....+ ..+ ++.+.++++...+. .++.+++.+...+.+. + +..+.+ +..
T Consensus 80 NGa~i~~~~~~i~~~~~~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (262)
T 2fue_A 80 NGTVQYKHGRLLSKQTIQNHLG---EELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSEL 156 (262)
T ss_dssp GGTEEEETTEECCCCCHHHHHC---HHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHH
T ss_pred CCcEEEeCCeEEEEeeccccCC---HHHHHHHHHHHHHcCceEEEEeCCeEEEechHHhhhHHhhcCCCcccccccEEEE
Confidence 999998743222221100 012 34455555443221 2344544333222211 1 111100 000
Q ss_pred ----ccHHHHHHHHHHHhcCCCeEEE-EcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc
Q 003999 722 ----CQAKELLDHLESVLANEPAVVK-RGQHIVEVKPQVLRPSSISVSLSLSVCVRARAC 776 (780)
Q Consensus 722 ----~qa~el~~~L~~~l~~~~v~v~-~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~ 776 (780)
....++.+.+.+.+.+..+.+. ++..++||.|+|+|||.|+++| ++++++++
T Consensus 157 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~vsKg~al~~l---~gi~~~~v 213 (262)
T 2fue_A 157 DKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSL---DQDSFDTI 213 (262)
T ss_dssp HHHHCHHHHHHHHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHH---TTSCCSEE
T ss_pred cCCHHHHHHHHHHHHHhCCCceEEEEECCCcEEEEecCCCCHHHHHHHH---HCCCHHHE
Confidence 0112233344443333246665 4678999999999999999999 89998765
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.9e-16 Score=175.51 Aligned_cols=239 Identities=10% Similarity=0.015 Sum_probs=157.8
Q ss_pred CEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHH-HhhhcCCEEEeecHHHHHHHHHHHHhhhC
Q 003999 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEIL-RGLLNCDLIGFHTFDYARHFLSCCSRMLG 278 (780)
Q Consensus 200 DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil-~~ll~~Dligf~t~~y~~~Fl~~~~r~l~ 278 (780)
|+|+.++.....+..+.|.. +.++.+++|....- ..+...+....+. +.+-.+|.|...+....+.+.
T Consensus 126 DvIh~~~~~~~~~~~~~~~~--~~p~v~~~h~~~~~-~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~-------- 194 (406)
T 2hy7_A 126 DVIVFESGIAVAFIELAKRV--NPAAKLVYRASDGL-STINVASYIEREFDRVAPTLDVIALVSPAMAAEVV-------- 194 (406)
T ss_dssp SEEEEESSGGGGGHHHHHHH--CTTSEEEEEESSCH-HHHTCCHHHHHHHHHHGGGCSEEEESCGGGGGGCS--------
T ss_pred CEEEECCchHHHHHHHHHHh--CCCEEEEEeccchh-hcccccHHHHHHHHHHHHhCCEEEEcCHHHHHHHH--------
Confidence 78884443322222344433 56778888865320 1111112222222 234457777766653221110
Q ss_pred ceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHH
Q 003999 279 LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQ 358 (780)
Q Consensus 279 ~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ 358 (780)
. .+ ++.++|+|||.+.|.+.... ...++++|++|||+.+.||+ ++.
T Consensus 195 ------------~-~~---~i~vipngvd~~~f~~~~~~------------~~~~~~~i~~vGrl~~~Kg~------~~~ 240 (406)
T 2hy7_A 195 ------------S-RD---NVFHVGHGVDHNLDQLGDPS------------PYAEGIHAVAVGSMLFDPEF------FVV 240 (406)
T ss_dssp ------------C-ST---TEEECCCCBCTTHHHHHCSC------------SCCSSEEEEEECCTTBCHHH------HHH
T ss_pred ------------h-cC---CEEEEcCCcChHhcCccccc------------ccCCCcEEEEEeccccccCH------HHH
Confidence 0 12 68899999999988653211 12344899999999999999 555
Q ss_pred HHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeecc
Q 003999 359 LLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNA 438 (780)
Q Consensus 359 ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS 438 (780)
+.+++|+++ |+++|. |+ ++ +.|.. ..|++ .|.++.+++.++|+.||++|+||
T Consensus 241 l~~~~~~~~----l~ivG~-----g~------------~~----~~~l~--~~V~f-~G~~~~~~l~~~~~~adv~v~ps 292 (406)
T 2hy7_A 241 ASKAFPQVT----FHVIGS-----GM------------GR----HPGYG--DNVIV-YGEMKHAQTIGYIKHARFGIAPY 292 (406)
T ss_dssp HHHHCTTEE----EEEESC-----SS------------CC----CTTCC--TTEEE-ECCCCHHHHHHHHHTCSEEECCB
T ss_pred HHHhCCCeE----EEEEeC-----ch------------HH----hcCCC--CCEEE-cCCCCHHHHHHHHHhcCEEEECC
Confidence 666788765 887763 22 11 11211 23665 57899999999999999999999
Q ss_pred CCcCCCcchhhhh-------hcccCCCccccccccCCCCCCCceEEEcCCCCccccCCCcEE-ECCCCHHHHHHHHHHHH
Q 003999 439 VRDGMNLVPYKYI-------VCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIR-VNPWDIDAVADAMTLAI 510 (780)
Q Consensus 439 ~rEGmnLv~~Ea~-------ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~-VnP~d~~~~A~ai~~aL 510 (780)
..||||++.+||| ||| .|+|+|.. ... -.+|++ |+|.|++++|++|.+++
T Consensus 293 ~~E~~~~~~lEAm~Kl~eYla~G-------------------~PVIas~~--v~~-~~~G~l~v~~~d~~~la~ai~~ll 350 (406)
T 2hy7_A 293 ASEQVPVYLADSSMKLLQYDFFG-------------------LPAVCPNA--VVG-PYKSRFGYTPGNADSVIAAITQAL 350 (406)
T ss_dssp SCSCCCTTHHHHCHHHHHHHHHT-------------------CCEEEEGG--GTC-SCSSEEEECTTCHHHHHHHHHHHH
T ss_pred CcccCchHHHHHHHHHHHHhhCC-------------------CcEEEehh--ccc-CcceEEEeCCCCHHHHHHHHHHHH
Confidence 9999999999999 997 48888876 111 124888 99999999999999999
Q ss_pred cCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHH
Q 003999 511 NMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQD 543 (780)
Q Consensus 511 ~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~ 543 (780)
++++ +++...++|...++++++-
T Consensus 351 ~~~~----------~~~~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 351 EAPR----------VRYRQCLNWSDTTDRVLDP 373 (406)
T ss_dssp HCCC----------CCCSCCCBHHHHHHHHHCG
T ss_pred hCcc----------hhhhhcCCHHHHHHHHHHh
Confidence 9875 1446678888888877643
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.65 E-value=8.5e-16 Score=159.53 Aligned_cols=177 Identities=14% Similarity=0.126 Sum_probs=112.4
Q ss_pred ccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc-C--CCceEEecCccEEeeC
Q 003999 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP-C--EMLGIAAEHGYFIRWN 665 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~-l--~~lgliaenG~~ir~~ 665 (780)
.+.|+|++|+||||++ .++.++++++++|++|++ . +.|+|+|||++..+.+.++. + ...++|++||++++..
T Consensus 4 ~~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~I~~NGa~i~~~ 78 (246)
T 2amy_A 4 PGPALCLFDVDGTLTA---PRQKITKEMDDFLQKLRQ-K-IKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKD 78 (246)
T ss_dssp CCSEEEEEESBTTTBC---TTSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEET
T ss_pred CCceEEEEECCCCcCC---CCcccCHHHHHHHHHHHh-C-CeEEEEcCCCHHHHHHHhccccccccCEEEECCCcEEEeC
Confidence 4579999999999999 667899999999999988 5 99999999999988888862 2 1236899999999875
Q ss_pred CCCceEecCC-CcChhHHHHHHHHHHHHHh--------cCCCceeecccceEEEee--ccCCC----Ccccc----c-HH
Q 003999 666 KTSEWETNHL-GADLEWKKIVEPVMRSYTE--------ATDGSNIEIKESALVWHH--QDADP----DFGSC----Q-AK 725 (780)
Q Consensus 666 ~~~~w~~~~~-~~d~~wk~~v~~i~~~~~e--------~t~gs~iE~k~~~l~~hy--r~ad~----d~~~~----q-a~ 725 (780)
++..|....+ ..+ ++.+.++++.+.+ ...+.+++.+...+.+.. +.... .+... . ..
T Consensus 79 ~~~i~~~~l~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (246)
T 2amy_A 79 GKLLCRQNIQSHLG---EALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQ 155 (246)
T ss_dssp TEEEEECCHHHHHC---HHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHH
T ss_pred CcEEEeeecccccC---HHHHHHHHHHHHhcCceEEEecCCceeEecccceeehhhhcCcCchhhhhhheeecCCHHHHH
Confidence 4333332110 012 2334444443322 123455543332222211 11100 00000 0 12
Q ss_pred HHHHHHHHHhcCCCeEEE-EcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc
Q 003999 726 ELLDHLESVLANEPAVVK-RGQHIVEVKPQVLRPSSISVSLSLSVCVRARAC 776 (780)
Q Consensus 726 el~~~L~~~l~~~~v~v~-~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~ 776 (780)
++.+.+.+.+....+.+. ++..++||.|+|+|||.|+++| +|+++++|
T Consensus 156 ~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~al~~l---~~i~~~~v 204 (246)
T 2amy_A 156 KFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHV---ENDGYKTI 204 (246)
T ss_dssp HHHHHHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGT---TTSCCSEE
T ss_pred HHHHHHHHhcCCCcEEEEEcCCcEEEEecCCCchHHHHHHH---hCCCHHHE
Confidence 233344443433346655 5789999999999999999999 89988765
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.64 E-value=3.5e-15 Score=157.17 Aligned_cols=178 Identities=14% Similarity=0.023 Sum_probs=116.1
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC----CceEEecCccEEeeC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE----MLGIAAEHGYFIRWN 665 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~----~lgliaenG~~ir~~ 665 (780)
+.|+|+||+||||++ ..+.++++++++|++|.+. |+.|+++|||+...+.+++..+. ..++|++||+.+...
T Consensus 4 ~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~ 79 (279)
T 4dw8_A 4 KYKLIVLDLDGTLTN---SKKEISSRNRETLIRIQEQ-GIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINW 79 (279)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEET
T ss_pred cceEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEEC
Confidence 368999999999999 6778999999999999995 99999999999999999887764 367899999999964
Q ss_pred CCCceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEE----------------eeccCCCCc----------
Q 003999 666 KTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVW----------------HHQDADPDF---------- 719 (780)
Q Consensus 666 ~~~~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~----------------hyr~ad~d~---------- 719 (780)
....... ....+.+ .+.++++.+.+..-...+........- .+... .++
T Consensus 80 ~~~~~~~-~~~l~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~k 154 (279)
T 4dw8_A 80 ESKEMMY-ENVLPNE---VVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRET-NDFLTDITLPVAK 154 (279)
T ss_dssp TTCCEEE-ECCCCGG---GHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEEC-SCHHHHSCSCCSC
T ss_pred CCCeEEE-EecCCHH---HHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccH-HHHHHhhcCCceE
Confidence 2222221 1123322 244455544432111111111100000 00000 000
Q ss_pred -----ccccHHHHHHHHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 -----GSCQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 -----~~~qa~el~~~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
......++.+.+.+.+.. .+. +.++..++||.|+++|||.+++++++++|+++++|.
T Consensus 155 i~~~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i 217 (279)
T 4dw8_A 155 CLIVGDAGKLIPVESELCIRLQG-KINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVI 217 (279)
T ss_dssp EEEESCHHHHHHHHHHHHHHTTT-TCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEE
T ss_pred EEEeCCHHHHHHHHHHHHHHhcC-CEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEE
Confidence 001223344444444433 244 557899999999999999999999999999997764
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.64 E-value=1.6e-15 Score=160.51 Aligned_cols=181 Identities=13% Similarity=0.098 Sum_probs=111.6
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCC--ceEEecCccEEeeCC-
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM--LGIAAEHGYFIRWNK- 666 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~--lgliaenG~~ir~~~- 666 (780)
+.|+|++|+||||++ .++.++++++++|++|++ .|+.|+|+|||++..+..++..++. .++|++||++++...
T Consensus 8 ~~~li~~DlDGTLl~---~~~~~~~~~~~~l~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~ 83 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLD---SHSYDWQPAAPWLTRLRE-ANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQ 83 (275)
T ss_dssp CCEEEEEECTTTTSC---SSCCSCCTTHHHHHHHHH-TTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTT
T ss_pred CceEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHH-CCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCc
Confidence 468999999999998 445566778999999998 4999999999999999999987642 269999999997332
Q ss_pred CC------ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccce-------EEEeecc--C--CCCcc----cccHH
Q 003999 667 TS------EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESA-------LVWHHQD--A--DPDFG----SCQAK 725 (780)
Q Consensus 667 ~~------~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~-------l~~hyr~--a--d~d~~----~~qa~ 725 (780)
.. .+.. ..+ .+.+..+++.+.+.....+....... ..+.+.. . ..++. -....
T Consensus 84 ~~~~~~~~~~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (275)
T 1xvi_A 84 WQEIDGFPRIIS---GIS---HGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSD 157 (275)
T ss_dssp CTTSTTTTEEEC---SSC---HHHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCH
T ss_pred ccccCceEEEec---CCC---HHHHHHHHHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCH
Confidence 11 1332 233 23445555443321111111000000 0000000 0 00000 00012
Q ss_pred HHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcC-CCCCc---cccCC
Q 003999 726 ELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVC-VRARA---CKLDD 780 (780)
Q Consensus 726 el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~-i~~~~---~~~~~ 780 (780)
+..+.+.+.+....+.+.++..++||.|+|++||.|++++++.++ +++.+ +.+||
T Consensus 158 ~~~~~~~~~l~~~~~~~~~~~~~leI~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD 216 (275)
T 1xvi_A 158 ERMAQFTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGD 216 (275)
T ss_dssp HHHHHHHHHHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEES
T ss_pred HHHHHHHHHHHhhCeEEEECCceEEEecCCCCHHHHHHHHHHHhhhcccccCcEEEECC
Confidence 223333333333357777778899999999999999999999999 88865 44444
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.8e-15 Score=160.64 Aligned_cols=178 Identities=15% Similarity=0.132 Sum_probs=118.4
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHH-HHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPE-VISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKT 667 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~-~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~ 667 (780)
..|+|+||+||||++ ..+.++++ +.++|++|.+. |+.|+++|||+...+.+++..++ ..++|++||+.+...+.
T Consensus 36 ~iKli~fDlDGTLld---~~~~i~~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~ 111 (304)
T 3l7y_A 36 SVKVIATDMDGTFLN---SKGSYDHNRFQRILKQLQER-DIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQ 111 (304)
T ss_dssp CCSEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHHT-TCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETTE
T ss_pred eeEEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECCE
Confidence 579999999999999 66778888 89999999995 99999999999999999888764 36899999999976543
Q ss_pred CceEecCCCcChhHHHHHHHHHHHHHhcCCCce--eecccceEEE----------------------eeccC-CCCc---
Q 003999 668 SEWETNHLGADLEWKKIVEPVMRSYTEATDGSN--IEIKESALVW----------------------HHQDA-DPDF--- 719 (780)
Q Consensus 668 ~~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~--iE~k~~~l~~----------------------hyr~a-d~d~--- 719 (780)
..+.. ..+ .+.+.++++.+.+..++.. +...+..... .+... ....
T Consensus 112 ~i~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ki 185 (304)
T 3l7y_A 112 SLIEV---FQQ---REDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFKL 185 (304)
T ss_dssp EEEEC---CCC---HHHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEEEE
T ss_pred EEEEe---cCC---HHHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCeEEE
Confidence 22222 233 3445566666554222211 1111110000 00000 0000
Q ss_pred ----ccccHHHHHHHHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 ----GSCQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 ----~~~qa~el~~~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.....+++.+.+.+.+.+..+. +.++..++||.|+++|||.|+++|++++|+++++|.
T Consensus 186 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i 248 (304)
T 3l7y_A 186 TLQVKEEESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLM 248 (304)
T ss_dssp EEECCGGGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred EEEcCHHHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEE
Confidence 0112344555555434331365 456889999999999999999999999999997764
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.63 E-value=9.2e-16 Score=150.97 Aligned_cols=141 Identities=16% Similarity=0.157 Sum_probs=111.8
Q ss_pred CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
.++++|+++||+++.||+..+++|++++ |+++ |+.+|... +.++ +.+++.++..... ..
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~----l~i~G~~~-----~~~~----l~~~~~~~~~~l~----~~ 79 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS-----KGDH----AERYARKIMKIAP----DN 79 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC-----TTST----HHHHHHHHHHHSC----TT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CCcE----EEEEecCc-----cHHH----HHHHHHhhhcccC----Cc
Confidence 4678999999999999999999999876 6665 77777422 2122 3334442111111 13
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC--
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-- 489 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-- 489 (780)
|.++ +.++.+++..+|+.||++|+||..||||++++|||+|| .|+|+|..+|..+.+.
T Consensus 80 v~~~-g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G-------------------~PvI~~~~~~~~e~i~~~ 139 (177)
T 2f9f_A 80 VKFL-GSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG-------------------KPVIAVNEGGFKETVINE 139 (177)
T ss_dssp EEEE-ESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT-------------------CCEEEESSHHHHHHCCBT
T ss_pred EEEe-CCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcC-------------------CcEEEeCCCCHHHHhcCC
Confidence 6654 68999999999999999999999999999999999997 4899999888887773
Q ss_pred -CcEEECCCCHHHHHHHHHHHHcCCH
Q 003999 490 -GAIRVNPWDIDAVADAMTLAINMRD 514 (780)
Q Consensus 490 -~al~VnP~d~~~~A~ai~~aL~m~~ 514 (780)
.|+++ |.|+++++++|.+++++++
T Consensus 140 ~~g~~~-~~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 140 KTGYLV-NADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp TTEEEE-CSCHHHHHHHHHHHHHCTT
T ss_pred CccEEe-CCCHHHHHHHHHHHHhCHH
Confidence 48899 9999999999999999886
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.63 E-value=6.5e-15 Score=155.06 Aligned_cols=176 Identities=13% Similarity=0.126 Sum_probs=118.0
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHH-HHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEV-ISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS 668 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~-~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~ 668 (780)
.|+|++|+||||++ .++.+++++ +++|++|++ .|+.|+|+|||++..+.+++..+. ..++|++||+.++..++.
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~~al~~l~~-~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 78 (271)
T 1rlm_A 3 VKVIVTDMDGTFLN---DAKTYNQPRFMAQYQELKK-RGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQ 78 (271)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHH-HTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEE
T ss_pred ccEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHHH-CCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCeE
Confidence 58999999999999 567889885 999999998 499999999999999998887663 457999999999865332
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhcC---------CCceeecccce-----EEEeeccCC--CCc-------------
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEAT---------DGSNIEIKESA-----LVWHHQDAD--PDF------------- 719 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~t---------~gs~iE~k~~~-----l~~hyr~ad--~d~------------- 719 (780)
.+.. ..+ .+.+.++++.+.+.. .+.+....... +...|.... +++
T Consensus 79 i~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~i~ 152 (271)
T 1rlm_A 79 LFHG---ELT---RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLN 152 (271)
T ss_dssp EEEC---CCC---HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEE
T ss_pred EEEe---cCC---HHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEEEE
Confidence 2322 233 355666766665431 22232211000 000010000 000
Q ss_pred -ccccHHHHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 -GSCQAKELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 -~~~qa~el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
....++++.+++.+.+.. .+.+ .++..++||.|++++||.+++++++.+|+++.+|.
T Consensus 153 ~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~ 211 (271)
T 1rlm_A 153 LPDEQIPLVIDKLHVALDG-IMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVV 211 (271)
T ss_dssp CCGGGHHHHHHHHHHHTTT-SSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEE
T ss_pred cCHHHHHHHHHHHHHHcCC-cEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEE
Confidence 011244555566544433 3554 46788999999999999999999999999997764
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.62 E-value=3.4e-15 Score=158.38 Aligned_cols=176 Identities=13% Similarity=0.121 Sum_probs=111.2
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCC----ceEEecCccEEeeCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM----LGIAAEHGYFIRWNK 666 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~----lgliaenG~~ir~~~ 666 (780)
.|+|++|+||||++ .++.++++++++|++|.+. |+.|+|+|||++..+..++..++. .++|++||+.++...
T Consensus 5 ~kli~~DlDGTLl~---~~~~i~~~~~~aL~~l~~~-Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~ 80 (282)
T 1rkq_A 5 IKLIAIDMDGTLLL---PDHTISPAVKNAIAAARAR-GVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAA 80 (282)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETT
T ss_pred ceEEEEeCCCCCCC---CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECC
Confidence 58999999999999 6678999999999999985 999999999999999998876632 258999999998742
Q ss_pred -CC-ceEecCCCcChhHHHHHHHHHHHHHhc--------CCCceeecccc-----------eEEEee---ccC--CCCcc
Q 003999 667 -TS-EWETNHLGADLEWKKIVEPVMRSYTEA--------TDGSNIEIKES-----------ALVWHH---QDA--DPDFG 720 (780)
Q Consensus 667 -~~-~w~~~~~~~d~~wk~~v~~i~~~~~e~--------t~gs~iE~k~~-----------~l~~hy---r~a--d~d~~ 720 (780)
+. .+.. ..+.++ +.++++...+. ..+.+.+.+.. .+.... ... +.+..
T Consensus 81 ~~~~i~~~---~l~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T 1rkq_A 81 DGSTVAQT---ALSYDD---YRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFL 154 (282)
T ss_dssp TCCEEEEC---CBCHHH---HHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBC
T ss_pred CCeEEEEe---cCCHHH---HHHHHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCce
Confidence 22 2332 344433 44444433321 11223321100 000000 000 00000
Q ss_pred ------c-ccHHHHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 721 ------S-CQAKELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 721 ------~-~qa~el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
. ....++.+.+.+.+.. .+.+ .++..++||.|+|++||.+++++++.+++++.+|.
T Consensus 155 ki~~~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~ 218 (282)
T 1rkq_A 155 KVMMIDEPAILDQAIARIPQEVKE-KYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIM 218 (282)
T ss_dssp EEEEECCHHHHHHHHHHSCHHHHH-HEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEE
T ss_pred EEEEECCHHHHHHHHHHHHHHhcC-CEEEEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEE
Confidence 0 0112222222211211 2554 47888999999999999999999999999986654
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.2e-14 Score=154.04 Aligned_cols=177 Identities=6% Similarity=0.031 Sum_probs=117.8
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS 668 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~ 668 (780)
+.|+|+||+||||++ ..+.++++++++|++|.+. |+.|+++|||+...+..++..++ ..++|++||+.++...+.
T Consensus 5 ~~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 80 (290)
T 3dnp_A 5 SKQLLALNIDGALLR---SNGKIHQATKDAIEYVKKK-GIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDA 80 (290)
T ss_dssp -CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHT-TCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTS
T ss_pred cceEEEEcCCCCCCC---CCCccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCC
Confidence 368999999999999 6778999999999999985 99999999999999988887664 237999999999864333
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeecc---------C------------CCCc--------
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQD---------A------------DPDF-------- 719 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~---------a------------d~d~-------- 719 (780)
.... ...+ ++.+.++++.+.+......+............. . -+++
T Consensus 81 ~~~~--~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (290)
T 3dnp_A 81 PFFE--KRIS---DDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEP 155 (290)
T ss_dssp CSEE--CCCC---HHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSC
T ss_pred EEEe--cCCC---HHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCC
Confidence 2221 1233 455777777766542222222211111100000 0 0000
Q ss_pred ----------ccccHHHHHHHHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 ----------GSCQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 ----------~~~qa~el~~~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
......++.+.+.... ..+. +.++..++||.|+++|||.|++++++++|+++++|.
T Consensus 156 ~~~~ki~~~~~~~~~~~~~~~l~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i 222 (290)
T 3dnp_A 156 VSAPVIEVYTEHDIQHDITETITKAF--PAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVV 222 (290)
T ss_dssp CCCSEEEEECCGGGHHHHHHHHHHHC--TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEE
T ss_pred CCceEEEEeCCHHHHHHHHHHHHhhC--CcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEE
Confidence 0112233444442221 2355 456899999999999999999999999999998764
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.62 E-value=2.7e-15 Score=160.94 Aligned_cols=177 Identities=11% Similarity=0.054 Sum_probs=114.6
Q ss_pred cCceEEeCCCCCCCCCCCC-CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHh--ccCC--C---ceEEecCccE
Q 003999 590 ERRAIFLDYDGTVVPETSI-IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL--APCE--M---LGIAAEHGYF 661 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~-~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f--~~l~--~---lgliaenG~~ 661 (780)
..|+|++|+||||++ . ++.++++++++|++|++. |+.|+|+|||++..+..++ ..++ . .++|++||+.
T Consensus 26 ~ikli~~DlDGTLl~---~~~~~is~~~~~al~~l~~~-Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~ 101 (301)
T 2b30_A 26 DIKLLLIDFDGTLFV---DKDIKVPSENIDAIKEAIEK-GYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTI 101 (301)
T ss_dssp CCCEEEEETBTTTBC---CTTTCSCHHHHHHHHHHHHH-TCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTE
T ss_pred cccEEEEECCCCCcC---CCCCccCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeE
Confidence 368999999999999 5 678999999999999985 9999999999999999888 6543 2 4699999999
Q ss_pred EeeCCCC-ceEecCCCcChhHHHHHHHHHHHHHhcC----------CCceeeccc-ce--------EEEeeccCC----C
Q 003999 662 IRWNKTS-EWETNHLGADLEWKKIVEPVMRSYTEAT----------DGSNIEIKE-SA--------LVWHHQDAD----P 717 (780)
Q Consensus 662 ir~~~~~-~w~~~~~~~d~~wk~~v~~i~~~~~e~t----------~gs~iE~k~-~~--------l~~hyr~ad----~ 717 (780)
+...++. .+.. ..+. +.+.++++.+.+.. .+.+++... .. ..++++..+ .
T Consensus 102 i~~~~~~~i~~~---~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (301)
T 2b30_A 102 VYDQIGYTLLDE---TIET---DVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLK 175 (301)
T ss_dssp EECTTCCEEEEC---CCCH---HHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTT
T ss_pred EEeCCCCEEEEc---cCCH---HHHHHHHHHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecchhhhc
Confidence 9874222 2222 2342 33445554443311 112221110 00 000111100 0
Q ss_pred --Cc-------ccccHHHHHHHHHHHhcCCCeEEE-EcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 718 --DF-------GSCQAKELLDHLESVLANEPAVVK-RGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 718 --d~-------~~~qa~el~~~L~~~l~~~~v~v~-~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.. ......++.+.|.+.+. ..+.+. ++..++||.|+|++||.|+++|++.+|+++++|.
T Consensus 176 ~~~i~ki~~~~~~~~~~~~~~~l~~~~~-~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~ 244 (301)
T 2b30_A 176 YRTMNKLMIVLDPSESKTVIGNLKQKFK-NKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVL 244 (301)
T ss_dssp CCCCSEEEECCCTTTHHHHHHHHHHHST-TTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEE
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHHhc-CCEEEEEeCCcceEecCCCCCcHHHHHHHHHHcCCCHHHEE
Confidence 00 00123444455544332 246654 5788999999999999999999999999987654
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=7.8e-15 Score=170.17 Aligned_cols=199 Identities=12% Similarity=0.027 Sum_probs=147.5
Q ss_pred EEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEE
Q 003999 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQI 375 (780)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~--~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi 375 (780)
++.++|+++++....+.... ...|+++ ++.+++++++|+.+ ||+..+++|+.++++++|+++ |+++
T Consensus 345 ~i~~ipn~~~~~~~~~~~~~-------~~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~----l~i~ 412 (568)
T 2vsy_A 345 HVLRLQGAFQPSDTSRVVAE-------PPSRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSV----LWLL 412 (568)
T ss_dssp EEEECSSCSCCCCTTCCCCC-------CCCTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCE----EEEE
T ss_pred eeEcCCCcCCCCCCCCCCCC-------CCCccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcE----EEEe
Confidence 57788886554322111000 0123444 34567789999999 999999999999999999876 8777
Q ss_pred EcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhccc
Q 003999 376 VNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQ 455 (780)
Q Consensus 376 ~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~ 455 (780)
|. +++.. +++++++.+.+.. ...|+| .|.++.+++.++|+.|||||+||.+ |||++.+|||+||
T Consensus 413 G~----~g~~~----~~l~~~~~~~~l~-----~~~v~~-~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G- 476 (568)
T 2vsy_A 413 SG----PGEAD----ARLRAFAHAQGVD-----AQRLVF-MPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTG- 476 (568)
T ss_dssp CC----STTHH----HHHHHHHHHTTCC-----GGGEEE-ECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTT-
T ss_pred cC----CHHHH----HHHHHHHHHcCCC-----hhHEEe-eCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCC-
Confidence 62 34443 3444555443211 013664 5689999999999999999999999 9999999999997
Q ss_pred CCCccccccccCCCCCCCceEEE-------cCCC-------CccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHH
Q 003999 456 GTPIMDEALGRERDSPHTSMLVV-------SEFI-------GCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRH 521 (780)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~-------Se~~-------G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~ 521 (780)
.|+|+ |..+ |+.+.+.+ |+++++++|.++++.++ .+....
T Consensus 477 ------------------~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~-------~~~~la~~i~~l~~~~~-~~~~~~ 530 (568)
T 2vsy_A 477 ------------------CPVLTTPGETFAARVAGSLNHHLGLDEMNVA-------DDAAFVAKAVALASDPA-ALTALH 530 (568)
T ss_dssp ------------------CCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS-------SHHHHHHHHHHHHHCHH-HHHHHH
T ss_pred ------------------CCEEeccCCCchHHHHHHHHHHCCChhhhcC-------CHHHHHHHHHHHhcCHH-HHHHHH
Confidence 48899 9888 88776543 89999999999999654 455555
Q ss_pred HHHhhHh---hhCCHHHHHHHHHHHHHHHHHh
Q 003999 522 EKHYRYV---STHDVAYWARSFAQDLERACRD 550 (780)
Q Consensus 522 ~~~~~~V---~~~~~~~Wa~~~l~~l~~~~~~ 550 (780)
++.++.+ ..+++...++.+.+-+++..+.
T Consensus 531 ~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 531 ARVDVLRRASGVFHMDGFADDFGALLQALARR 562 (568)
T ss_dssp HHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 6677777 6699999999999888877664
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.60 E-value=7.2e-15 Score=153.90 Aligned_cols=176 Identities=14% Similarity=0.237 Sum_probs=114.7
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCce
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEW 670 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w 670 (780)
.|+|+||+||||++ ..+.++++++++|++|.+. |+.|+++|||+...+.+++..++..++|++||+.+...+...+
T Consensus 5 ~kli~fDlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~ 80 (274)
T 3fzq_A 5 YKLLILDIDGTLRD---EVYGIPESAKHAIRLCQKN-HCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELLY 80 (274)
T ss_dssp CCEEEECSBTTTBB---TTTBCCHHHHHHHHHHHHT-TCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEEE
T ss_pred ceEEEEECCCCCCC---CCCcCCHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEEE
Confidence 58999999999999 6678999999999999984 9999999999999999988877545689999999986543233
Q ss_pred EecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEE----------------------Eee--cc---C-------C
Q 003999 671 ETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALV----------------------WHH--QD---A-------D 716 (780)
Q Consensus 671 ~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~----------------------~hy--r~---a-------d 716 (780)
.. ..+ .+.+.++++.+.+..-...+........ |.. .. . .
T Consensus 81 ~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (274)
T 3fzq_A 81 NQ---SFN---QRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYKS 154 (274)
T ss_dssp EC---CCC---HHHHHHHHHHHHHHTCEEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCSS
T ss_pred Ec---CCC---HHHHHHHHHHHHHCCceEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhcc
Confidence 32 233 2445556655544321112221111110 000 00 0 0
Q ss_pred CCc---ccccHHHHHHHHHHHhcCCCeE-EEEcC--eEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 717 PDF---GSCQAKELLDHLESVLANEPAV-VKRGQ--HIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 717 ~d~---~~~qa~el~~~L~~~l~~~~v~-v~~g~--~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
... ......+..+.+.+.+... +. +.++. .++||.|++++||.+++++++++|+++++|.
T Consensus 155 ~~~~ki~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i 220 (274)
T 3fzq_A 155 QDIHKICLWSNEKVFDEVKDILQDK-MELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETI 220 (274)
T ss_dssp CCCCEEEEECCHHHHHHHHHHHGGG-EEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEE
T ss_pred cCeEEEEEEcCHHHHHHHHHHhhcc-eEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEE
Confidence 000 0001122333444434332 34 34555 9999999999999999999999999997764
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.8e-14 Score=151.48 Aligned_cols=175 Identities=14% Similarity=0.056 Sum_probs=112.2
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-Cc-eEEecCccEEeeCCCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-ML-GIAAEHGYFIRWNKTS 668 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~l-gliaenG~~ir~~~~~ 668 (780)
.|+|++|+||||++ .++.++++++++|++ .+ .|+.|+|+|||+...+.+++..++ .. ++|++||+.+...++
T Consensus 2 ikli~~DlDGTLl~---~~~~i~~~~~~al~~-~~-~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~- 75 (268)
T 1nf2_A 2 YRVFVFDLDGTLLN---DNLEISEKDRRNIEK-LS-RKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEE- 75 (268)
T ss_dssp BCEEEEECCCCCSC---TTSCCCHHHHHHHHH-HT-TTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTT-
T ss_pred ccEEEEeCCCcCCC---CCCccCHHHHHHHHH-Hh-CCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCC-
Confidence 47999999999999 667899999999999 76 599999999999999999887653 22 699999999987422
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhc--------CCCceeeccc---------ceEEEe-eccCCCCc-----------
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEA--------TDGSNIEIKE---------SALVWH-HQDADPDF----------- 719 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~--------t~gs~iE~k~---------~~l~~h-yr~ad~d~----------- 719 (780)
.... ....+. +.+.++++.+.+. ..+.+.+.+. ..+... +... .++
T Consensus 76 ~~i~-~~~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ki~~ 150 (268)
T 1nf2_A 76 GVIL-NEKIPP---EVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNL-SELVSKMGTTKLLL 150 (268)
T ss_dssp EEEE-ECCBCH---HHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTH-HHHHHHHCBSEEEE
T ss_pred CEEE-ecCCCH---HHHHHHHHHHHhCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCH-HHhcccCCceEEEE
Confidence 2221 122443 3345555554432 1222222110 000000 0000 000
Q ss_pred -c-cccHHHHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 -G-SCQAKELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 -~-~~qa~el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
. .....++.+.+.+.+.. .+.+ .++..++||.|++++||.+++++++.+++++.+|.
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~ 210 (268)
T 1nf2_A 151 IDTPERLDELKEILSERFKD-VVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIV 210 (268)
T ss_dssp ECCHHHHHHHHHHHHHHHTT-TSEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEE
T ss_pred ECCHHHHHHHHHHHHHHhcC-CEEEEEecCceEEEeCCCCChHHHHHHHHHHcCCCHHHeE
Confidence 0 00122333344333322 3554 46788999999999999999999999999997764
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.1e-14 Score=153.31 Aligned_cols=178 Identities=11% Similarity=0.057 Sum_probs=103.2
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC----CceEEecCccEEeeC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE----MLGIAAEHGYFIRWN 665 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~----~lgliaenG~~ir~~ 665 (780)
+.|+|+||+||||++ ..+.++++++++|++|.+. |+.|+++|||++..+.+++..+. ..++|++||+.+...
T Consensus 4 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~ 79 (279)
T 3mpo_A 4 TIKLIAIDIDGTLLN---EKNELAQATIDAVQAAKAQ-GIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTI 79 (279)
T ss_dssp -CCEEEECC--------------CHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEET
T ss_pred ceEEEEEcCcCCCCC---CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECC
Confidence 368999999999999 6678999999999999995 99999999999999999887653 236999999944344
Q ss_pred CCCceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEe-------------------eccC-----CCCc--
Q 003999 666 KTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWH-------------------HQDA-----DPDF-- 719 (780)
Q Consensus 666 ~~~~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~h-------------------yr~a-----d~d~-- 719 (780)
.+..... ...+ .+.+.++++.+.+..-...+.......... +... +...
T Consensus 80 ~~~~~~~--~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 154 (279)
T 3mpo_A 80 SGKVLTN--HSLT---YEDYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISK 154 (279)
T ss_dssp TSCEEEE--CCCC---HHHHHHHHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCE
T ss_pred CCCEEEe--cCCC---HHHHHHHHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEE
Confidence 3332221 1233 344556666555432222222111111000 0000 0000
Q ss_pred ----c-cccHHHHHHHHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 ----G-SCQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 ----~-~~qa~el~~~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
. .....++.+.+.+.+.+ .+. +.++..++||.|+++|||.|++++++++|+++++|.
T Consensus 155 i~~~~~~~~~~~~~~~l~~~~~~-~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i 217 (279)
T 3mpo_A 155 AMFVDYPQVIEQVKANMPQDFKD-RFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVM 217 (279)
T ss_dssp EEEECCHHHHHHHHHHCCHHHHH-HEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEE
T ss_pred EEEcCCHHHHHHHHHHHHHHhCC-CEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEE
Confidence 0 00112223333222222 244 446889999999999999999999999999997764
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.57 E-value=2.9e-14 Score=148.52 Aligned_cols=175 Identities=13% Similarity=0.086 Sum_probs=112.1
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCce
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEW 670 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w 670 (780)
.|+|++|+||||++ ..+.++++++++|++|.+. |+.|+++|||+...+..++..++..++|+.||+++...++..+
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~ 78 (258)
T 2pq0_A 3 RKIVFFDIDGTLLD---EQKQLPLSTIEAVRRLKQS-GVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLY 78 (258)
T ss_dssp CCEEEECTBTTTBC---TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEE
T ss_pred ceEEEEeCCCCCcC---CCCccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEE
Confidence 58999999999999 5677999999999999985 9999999999999988888765323478999999987543222
Q ss_pred EecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEE----------------eeccCCCCccc---------ccHH
Q 003999 671 ETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVW----------------HHQDADPDFGS---------CQAK 725 (780)
Q Consensus 671 ~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~----------------hyr~ad~d~~~---------~qa~ 725 (780)
.. ..+ .+.+.++++.+.+..-...+......... .+...++++.. ...+
T Consensus 79 ~~---~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 152 (258)
T 2pq0_A 79 KQ---PLR---REKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRA 152 (258)
T ss_dssp EC---CCC---HHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCH
T ss_pred Ee---cCC---HHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCH
Confidence 22 223 35566666665543111111111110000 00001111100 0001
Q ss_pred HHHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 726 ELLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 726 el~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+....+.+.+. .+.+ .++..++||.|+|+|||.|++++++++|+++++|.
T Consensus 153 ~~~~~~~~~~~--~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i 203 (258)
T 2pq0_A 153 EEEEPYVRNYP--EFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVY 203 (258)
T ss_dssp HHHHHHHHHCT--TEEEEEEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHhCC--CeEEEEeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEE
Confidence 11222332222 3543 46788999999999999999999999999997764
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.55 E-value=3.8e-14 Score=148.28 Aligned_cols=175 Identities=15% Similarity=0.104 Sum_probs=110.6
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEE-eeCCCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFI-RWNKTS 668 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~i-r~~~~~ 668 (780)
..|+|+||+||||++. ..+.++++++++|++|++. |+.|+++|||+...+ +.+..++..++|++||+.+ ...++.
T Consensus 11 miKli~~DlDGTLl~~--~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~-~~~~~l~~~~~i~~nGa~i~~~~~~~ 86 (268)
T 3r4c_A 11 MIKVLLLDVDGTLLSF--ETHKVSQSSIDALKKVHDS-GIKIVIATGRAASDL-HEIDAVPYDGVIALNGAECVLRDGSV 86 (268)
T ss_dssp CCCEEEECSBTTTBCT--TTCSCCHHHHHHHHHHHHT-TCEEEEECSSCTTCC-GGGTTSCCCEEEEGGGTEEEETTSCE
T ss_pred ceEEEEEeCCCCCcCC--CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCChHHh-HHHHhcCCCcEEEeCCcEEEEcCCeE
Confidence 3689999999999982 2457899999999999995 999999999999888 4566665567899999999 766432
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEe--------ecc---CCC---Ccc-c-----------c
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWH--------HQD---ADP---DFG-S-----------C 722 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~h--------yr~---ad~---d~~-~-----------~ 722 (780)
.+.. ..+ .+.+.++++.+.+..-...+.......... ++. ..+ ++. . .
T Consensus 87 ~~~~---~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (268)
T 3r4c_A 87 IRKV---AIP---AQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCFY 160 (268)
T ss_dssp EEEC---CCC---HHHHHHHHHHHHHTTCEEEEEETTEEEESCCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCEEEE
T ss_pred EEEe---cCC---HHHHHHHHHHHHHcCcEEEEEECCEEEEeCCcHHHHHHHHHcCCCCCcccchHHHhccCceEEEEEe
Confidence 2322 233 344555665554422122222211111000 000 000 000 0 0
Q ss_pred cHHHHHHHHHHHhcC-CCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 723 QAKELLDHLESVLAN-EPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 723 qa~el~~~L~~~l~~-~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
..++.... +... ..+. +.++..++||.|+++|||.|++++++++|+++++|.
T Consensus 161 ~~~~~~~~---~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i 214 (268)
T 3r4c_A 161 FDEEAEQK---VMPLLSGLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIM 214 (268)
T ss_dssp CCHHHHHH---HGGGCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEE
T ss_pred cChHHHHH---HHHhCCCcEEEEecCCeEEEeeCCCCHHHHHHHHHHHcCCCHHHEE
Confidence 00111111 1221 2344 456889999999999999999999999999997764
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.3e-13 Score=146.50 Aligned_cols=177 Identities=14% Similarity=0.095 Sum_probs=114.6
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~ 669 (780)
.|+|++|+||||++ ..+.++++++++|++|++. |+.|+++|||++..+..++..++ ...+|++||+.++...+..
T Consensus 4 ikli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~ 79 (288)
T 1nrw_A 4 MKLIAIDLDGTLLN---SKHQVSLENENALRQAQRD-GIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRL 79 (288)
T ss_dssp CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCE
T ss_pred eEEEEEeCCCCCCC---CCCccCHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcCCCcE
Confidence 58999999999999 5678999999999999984 99999999999999999988763 2359999999998742222
Q ss_pred -eEecCCCcChhHHHHHHHHHHHHHhcC--------CCceeeccc------c--e-----------------------EE
Q 003999 670 -WETNHLGADLEWKKIVEPVMRSYTEAT--------DGSNIEIKE------S--A-----------------------LV 709 (780)
Q Consensus 670 -w~~~~~~~d~~wk~~v~~i~~~~~e~t--------~gs~iE~k~------~--~-----------------------l~ 709 (780)
+.. ..+ .+.+.++++...+.. .+.+.+... . . ..
T Consensus 80 ~~~~---~~~---~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (288)
T 1nrw_A 80 YHHE---TID---KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSG 153 (288)
T ss_dssp EEEC---CCC---HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCC
T ss_pred EEEe---eCC---HHHHHHHHHHHHHCCcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHHHhhhhhhhhcCC
Confidence 222 223 355666666554321 122221100 0 0 00
Q ss_pred EeeccCCCCc-------c--c----ccHHHHHHHHHHHhcC-CCeEEE-EcCeEEEEEeCCCCHHHHHHHHHHHcCCCCC
Q 003999 710 WHHQDADPDF-------G--S----CQAKELLDHLESVLAN-EPAVVK-RGQHIVEVKPQVLRPSSISVSLSLSVCVRAR 774 (780)
Q Consensus 710 ~hyr~ad~d~-------~--~----~qa~el~~~L~~~l~~-~~v~v~-~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~ 774 (780)
+.+...-.++ . . ...++..+.+.+.+.. ..+.+. ++..++||.|+|++||.+++++++.+|+++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~lei~~~~~~K~~~~~~~~~~~~~~~~ 233 (288)
T 1nrw_A 154 FAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLE 233 (288)
T ss_dssp EEECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHTTCCGG
T ss_pred ceEcCCHHHhhccccCCCceEEEEEcCCHHHHHHHHHHHhhCCCEEEEeeCCCcEEEecCCCChHHHHHHHHHHhCCCHH
Confidence 1111000000 0 0 0011223334443332 236654 5788999999999999999999999999987
Q ss_pred ccc
Q 003999 775 ACK 777 (780)
Q Consensus 775 ~~~ 777 (780)
+|.
T Consensus 234 ~~~ 236 (288)
T 1nrw_A 234 ETA 236 (288)
T ss_dssp GEE
T ss_pred HEE
Confidence 764
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=9.1e-15 Score=151.83 Aligned_cols=166 Identities=16% Similarity=0.161 Sum_probs=105.3
Q ss_pred ceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC--C-CceEEecCccEEeeCC--
Q 003999 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC--E-MLGIAAEHGYFIRWNK-- 666 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l--~-~lgliaenG~~ir~~~-- 666 (780)
++|++|+||||++. +..+ ++++++|+++.+ |+.|+|+|||++..+.+++..+ + ..++|++||+.++...
T Consensus 4 ~li~~DlDGTLl~~---~~~~-~~~~~~l~~~~~--gi~v~iaTGR~~~~~~~~~~~l~l~~~~~~I~~NGa~i~~~~~~ 77 (244)
T 1s2o_A 4 LLLISDLDNTWVGD---QQAL-EHLQEYLGDRRG--NFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGL 77 (244)
T ss_dssp EEEEECTBTTTBSC---HHHH-HHHHHHHHTTGG--GEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEE
T ss_pred eEEEEeCCCCCcCC---HHHH-HHHHHHHHHhcC--CCEEEEEcCCCHHHHHHHHHHcCCCCCCEEEECCCcEEEeCCCc
Confidence 49999999999983 3333 678889988653 7999999999999999988763 2 2479999999998642
Q ss_pred CCceEecCCCcChhH-HHHHHHHHHHHHhcCCCcee----ecccceEEEeeccCCCCcccccHHHHHHHHHHHhcC--CC
Q 003999 667 TSEWETNHLGADLEW-KKIVEPVMRSYTEATDGSNI----EIKESALVWHHQDADPDFGSCQAKELLDHLESVLAN--EP 739 (780)
Q Consensus 667 ~~~w~~~~~~~d~~w-k~~v~~i~~~~~e~t~gs~i----E~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~--~~ 739 (780)
+..|... .+..| .+.+..++. ..++... +.+...+.+++.. +.. .+..+.+.+.+.. ..
T Consensus 78 ~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ki~~~~~~---~~~----~~~~~~l~~~~~~~~~~ 143 (244)
T 1s2o_A 78 DQHWADY---LSEHWQRDILQAIAD----GFEALKPQSPLEQNPWKISYHLDP---QAC----PTVIDQLTEMLKETGIP 143 (244)
T ss_dssp CHHHHHH---HHTTCCHHHHHHHHH----TCTTEEECCGGGCBTTBEEEEECT---TSC----THHHHHHHHHHHTSSCC
T ss_pred ChHHHHH---HhccccHHHHHHHHH----hccCccccCcccCCCeEEEEEeCh---hhH----HHHHHHHHHHHHhcCCC
Confidence 1112110 01112 122222222 2222211 2233445555432 111 1223334433332 24
Q ss_pred eEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 740 AVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 740 v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+.+ .++..++||.|+|++||.+++++++.+++++++|.
T Consensus 144 ~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~ 182 (244)
T 1s2o_A 144 VQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQTL 182 (244)
T ss_dssp EEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred eEEEEecCceEEeccCCCChHHHHHHHHHHhCCCHHHEE
Confidence 665 46789999999999999999999999999987754
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.54 E-value=5.4e-14 Score=154.17 Aligned_cols=244 Identities=15% Similarity=0.122 Sum_probs=153.3
Q ss_pred HHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhh--cCCEEEeecHHHHH
Q 003999 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIGFHTFDYAR 267 (780)
Q Consensus 190 ~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~Dligf~t~~y~~ 267 (780)
++++..+| |+|++|++....++..+..+..++|+. ..|.++.+...+. ++.....+.++ .+|.+...+....+
T Consensus 85 ~~l~~~~p--Dvv~~~~~~~~~~~~~~~a~~~~ip~v-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~ 159 (376)
T 1v4v_A 85 RALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVG-HVEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKA 159 (376)
T ss_dssp HHHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEE-EETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHH
T ss_pred HHHHHcCC--CEEEEeCChHHHHHHHHHHHHhCCCEE-EEeCCCccccccC--CCchHHHHHHHHHHhceeeCCCHHHHH
Confidence 34556677 899999876555554443444578875 4555443222221 22333444332 37888888776665
Q ss_pred HHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecC-CCchhhhhhcCCchhHHHHHHHHHHcC-CCeEEEEeccccc
Q 003999 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVG-VHMGRLESVLNLPATATKIKEIEKQFD-GKKLILGIDDMDI 345 (780)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~G-Id~~~~~~~~~~~~~~~~~~~lr~~~~-~~~vil~Vdrld~ 345 (780)
.|.+ .|+. ..++.++|++ +|...+... ..+++++++ ++.+++.++|+..
T Consensus 160 ~l~~-----~g~~---------------~~ki~vi~n~~~d~~~~~~~---------~~~~~~~~~~~~~vl~~~gr~~~ 210 (376)
T 1v4v_A 160 NLLK-----EGKR---------------EEGILVTGQTGVDAVLLAAK---------LGRLPEGLPEGPYVTVTMHRREN 210 (376)
T ss_dssp HHHT-----TTCC---------------GGGEEECCCHHHHHHHHHHH---------HCCCCTTCCSSCEEEECCCCGGG
T ss_pred HHHH-----cCCC---------------cceEEEECCchHHHHhhhhh---------hhHHHHhcCCCCEEEEEeCcccc
Confidence 5542 1321 1135566664 443322110 011233343 3456778999999
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHH
Q 003999 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (780)
Q Consensus 346 ~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~ 425 (780)
.||+..+++|++++.+++|+++ |+.++. .++ +++++++++++ . ...|+++ +.++..++.
T Consensus 211 ~k~~~~ll~a~~~l~~~~~~~~----lv~~~g----~~~---~~~~~l~~~~~---~------~~~v~~~-g~~g~~~~~ 269 (376)
T 1v4v_A 211 WPLLSDLAQALKRVAEAFPHLT----FVYPVH----LNP---VVREAVFPVLK---G------VRNFVLL-DPLEYGSMA 269 (376)
T ss_dssp GGGHHHHHHHHHHHHHHCTTSE----EEEECC----SCH---HHHHHHHHHHT---T------CTTEEEE-CCCCHHHHH
T ss_pred hHHHHHHHHHHHHHHhhCCCeE----EEEECC----CCH---HHHHHHHHHhc---c------CCCEEEE-CCCCHHHHH
Confidence 9999999999999988899875 554432 222 23344444432 1 1247655 567888999
Q ss_pred HHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcC-CCCccccC--CCcEEECCCCHHHH
Q 003999 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE-FIGCSPSL--SGAIRVNPWDIDAV 502 (780)
Q Consensus 426 aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l--~~al~VnP~d~~~~ 502 (780)
.+|+.||++|.+| +|+ .+|||+||. |+|++. .+|+.+.+ ..|++|+ .|++++
T Consensus 270 ~~~~~ad~~v~~S--~g~---~lEA~a~G~-------------------PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~l 324 (376)
T 1v4v_A 270 ALMRASLLLVTDS--GGL---QEEGAALGV-------------------PVVVLRNVTERPEGLKAGILKLAG-TDPEGV 324 (376)
T ss_dssp HHHHTEEEEEESC--HHH---HHHHHHTTC-------------------CEEECSSSCSCHHHHHHTSEEECC-SCHHHH
T ss_pred HHHHhCcEEEECC--cCH---HHHHHHcCC-------------------CEEeccCCCcchhhhcCCceEECC-CCHHHH
Confidence 9999999999999 554 789999974 777764 45555544 2478885 499999
Q ss_pred HHHHHHHHcCC
Q 003999 503 ADAMTLAINMR 513 (780)
Q Consensus 503 A~ai~~aL~m~ 513 (780)
|++|.++|+++
T Consensus 325 a~~i~~ll~d~ 335 (376)
T 1v4v_A 325 YRVVKGLLENP 335 (376)
T ss_dssp HHHHHHHHTCH
T ss_pred HHHHHHHHhCh
Confidence 99999999865
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.53 E-value=3.3e-14 Score=146.11 Aligned_cols=165 Identities=10% Similarity=-0.019 Sum_probs=109.0
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~ 669 (780)
.|+|++|+||||++ .++.++++++++|++|++. |+.|+|+|||++..+.+++..++ ..++|++||+.++..++ .
T Consensus 5 ~kli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~~-g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~-~ 79 (227)
T 1l6r_A 5 IRLAAIDVDGNLTD---RDRLISTKAIESIRSAEKK-GLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDG-S 79 (227)
T ss_dssp CCEEEEEHHHHSBC---TTSCBCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTS-C
T ss_pred eEEEEEECCCCCcC---CCCcCCHHHHHHHHHHHHC-CCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCC-C
Confidence 48999999999999 5678999999999999984 99999999999999999887653 22599999999986432 2
Q ss_pred eEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcc---cccHHHHHHHHHHHhcCCCeEEEEcC
Q 003999 670 WETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFG---SCQAKELLDHLESVLANEPAVVKRGQ 746 (780)
Q Consensus 670 w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~---~~qa~el~~~L~~~l~~~~v~v~~g~ 746 (780)
+....... +.+.++ +...+ .+ +.+.. ...+++ . .++. .....+..+.+.+.+ .+.+.++.
T Consensus 80 ~i~~~~~l-----~~~~~i-~~~~~----~~-~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 142 (227)
T 1l6r_A 80 IKKFFSNE-----GTNKFL-EEMSK----RT-SMRSI-LTNRWR-E-ASTGFDIDPEDVDYVRKEAESR---GFVIFYSG 142 (227)
T ss_dssp EEESSCSH-----HHHHHH-HHHTT----TS-SCBCC-GGGGGC-S-SSEEEBCCGGGHHHHHHHHHTT---TEEEEEET
T ss_pred EEEEeccH-----HHHHHH-HHHHH----Hh-cCCcc-ccccce-e-cccceEEecCCHHHHHHHHHhc---CEEEEecC
Confidence 22011112 344445 43332 11 11110 000000 0 0000 000112223333323 56666899
Q ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 747 HIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 747 ~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.++||.|+|++||.+++++++.+++++.+|.
T Consensus 143 ~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~ 173 (227)
T 1l6r_A 143 YSWHLMNRGEDKAFAVNKLKEMYSLEYDEIL 173 (227)
T ss_dssp TEEEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred cEEEEecCCCCHHHHHHHHHHHhCcCHHHEE
Confidence 9999999999999999999999999986653
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=4.3e-14 Score=153.95 Aligned_cols=257 Identities=12% Similarity=0.017 Sum_probs=162.2
Q ss_pred HHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFL 270 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl 270 (780)
+++..+| |+|++|.....+ +..+..+..++|++++.|..+|.. .+..+. -.+|.+...+..
T Consensus 91 ~l~~~~p--Dvv~~~~~~~~~-~~~~~~~~~~~p~v~~~~~~~~~~--------~~~~~~--~~~d~v~~~~~~------ 151 (364)
T 1f0k_A 91 IMKAYKP--DVVLGMGGYVSG-PGGLAAWSLGIPVVLHEQNGIAGL--------TNKWLA--KIATKVMQAFPG------ 151 (364)
T ss_dssp HHHHHCC--SEEEECSSTTHH-HHHHHHHHTTCCEEEEECSSSCCH--------HHHHHT--TTCSEEEESSTT------
T ss_pred HHHhcCC--CEEEEeCCcCch-HHHHHHHHcCCCEEEEecCCCCcH--------HHHHHH--HhCCEEEecChh------
Confidence 3445566 899999754332 333333345788888888766531 011111 124544332210
Q ss_pred HHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc-CCCe-EEEEeccccccCC
Q 003999 271 SCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKK-LILGIDDMDIFKG 348 (780)
Q Consensus 271 ~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~-~~~~-vil~Vdrld~~KG 348 (780)
. +. ++.++|+|+|.+.+... .. ..++ .. ++++ +++.+||+.+.||
T Consensus 152 ----------------~----~~----~~~~i~n~v~~~~~~~~----~~---~~~~--~~~~~~~~il~~~g~~~~~k~ 198 (364)
T 1f0k_A 152 ----------------A----FP----NAEVVGNPVRTDVLALP----LP---QQRL--AGREGPVRVLVVGGSQGARIL 198 (364)
T ss_dssp ----------------S----SS----SCEECCCCCCHHHHTSC----CH---HHHH--TTCCSSEEEEEECTTTCCHHH
T ss_pred ----------------h----cC----CceEeCCccchhhcccc----hh---hhhc--ccCCCCcEEEEEcCchHhHHH
Confidence 0 11 35688999998776431 11 1111 12 3455 5556779999999
Q ss_pred hHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHH
Q 003999 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (780)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly 428 (780)
+..+++|++++.+ ++.++.+++ .++ .+ ++.+++++. |. ..|.+. +.+ +++..+|
T Consensus 199 ~~~li~a~~~l~~-------~~~~l~i~G----~~~-~~----~l~~~~~~~----~~---~~v~~~-g~~--~~~~~~~ 252 (364)
T 1f0k_A 199 NQTMPQVAAKLGD-------SVTIWHQSG----KGS-QQ----SVEQAYAEA----GQ---PQHKVT-EFI--DDMAAAY 252 (364)
T ss_dssp HHHHHHHHHHHGG-------GEEEEEECC----TTC-HH----HHHHHHHHT----TC---TTSEEE-SCC--SCHHHHH
T ss_pred HHHHHHHHHHhcC-------CcEEEEEcC----Cch-HH----HHHHHHhhc----CC---CceEEe-cch--hhHHHHH
Confidence 9999999998743 244433332 222 22 334444433 21 136655 455 7899999
Q ss_pred HhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccc-------cC--C-CcEEECCCC
Q 003999 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSP-------SL--S-GAIRVNPWD 498 (780)
Q Consensus 429 ~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~-------~l--~-~al~VnP~d 498 (780)
+.||++|+|| | +++++|||+|| .|+|+|...|... .+ . .|++++|.|
T Consensus 253 ~~ad~~v~~s---g-~~~~~EAma~G-------------------~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d 309 (364)
T 1f0k_A 253 AWADVVVCRS---G-ALTVSEIAAAG-------------------LPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQ 309 (364)
T ss_dssp HHCSEEEECC---C-HHHHHHHHHHT-------------------CCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGG
T ss_pred HhCCEEEECC---c-hHHHHHHHHhC-------------------CCEEEeeCCCCchhHHHHHHHHHhCCcEEEecccc
Confidence 9999999999 4 89999999997 4899999887632 34 2 489999988
Q ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHHHHhh
Q 003999 499 --IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDH 551 (780)
Q Consensus 499 --~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~~~~~ 551 (780)
++++|++|.++ .++.++...+..++++..+++..-++.+++-+++..+.|
T Consensus 310 ~~~~~la~~i~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 361 (364)
T 1f0k_A 310 LSVDAVANTLAGW---SRETLLTMAERARAASIPDATERVANEVSRVARALEHHH 361 (364)
T ss_dssp CCHHHHHHHHHTC---CHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC----
T ss_pred CCHHHHHHHHHhc---CHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHhhc
Confidence 99999999988 344566666667888888888887887776666554443
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.52 E-value=7.6e-14 Score=143.41 Aligned_cols=166 Identities=14% Similarity=0.069 Sum_probs=112.6
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~ 669 (780)
.|+|+||+||||++ ..+.++++++++|++|++. |+.|+++|||+...+.+++..++ ...+|++||+.+...++..
T Consensus 3 ~kli~~DlDGTLl~---~~~~i~~~~~~al~~l~~~-G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~ 78 (231)
T 1wr8_A 3 IKAISIDIDGTITY---PNRMIHEKALEAIRRAESL-GIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRI 78 (231)
T ss_dssp CCEEEEESTTTTBC---TTSCBCHHHHHHHHHHHHT-TCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEE
T ss_pred eeEEEEECCCCCCC---CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEE
Confidence 47999999999999 5678999999999999984 99999999999999988876543 2358999999987633212
Q ss_pred eEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccc----eEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEEEc
Q 003999 670 WETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKES----ALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRG 745 (780)
Q Consensus 670 w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~----~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g 745 (780)
|.. .. +.+.++++.+.+..||..++..+. .+.+. . +.. . .+....+.+.+. ..+.++++
T Consensus 79 ~~~---~l-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~---~-~~~~~~~~~~~~-~~~~~~~~ 141 (231)
T 1wr8_A 79 FLA---SM-----DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIM-R---ETI---N-VETVREIINELN-LNLVAVDS 141 (231)
T ss_dssp ESC---CC-----SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEEC-T---TTS---C-HHHHHHHHHHTT-CSCEEEEC
T ss_pred Eec---cH-----HHHHHHHHHHHHhCCCceEEecCCCceeeEEEE-C---CCC---C-HHHHHHHHHhcC-CcEEEEec
Confidence 221 12 334556655553445544321100 11111 0 110 1 122222222233 23665588
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 746 QHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 746 ~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
..++|+.|++.+|+.+++++++++|+++.+|.
T Consensus 142 ~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~ 173 (231)
T 1wr8_A 142 GFAIHVKKPWINKGSGIEKASEFLGIKPKEVA 173 (231)
T ss_dssp SSCEEEECTTCCHHHHHHHHHHHHTSCGGGEE
T ss_pred CcEEEEecCCCChHHHHHHHHHHcCCCHHHEE
Confidence 89999999999999999999999999987764
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=3.3e-13 Score=149.03 Aligned_cols=249 Identities=10% Similarity=-0.007 Sum_probs=156.4
Q ss_pred HHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHh-hhcCCEEEeecHHHHHH
Q 003999 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRG-LLNCDLIGFHTFDYARH 268 (780)
Q Consensus 190 ~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~-ll~~Dligf~t~~y~~~ 268 (780)
++++..+| |+|+++.++++ |.++.... . |+.+..+...+.+ +.+. +-.+|.|.+++...++.
T Consensus 105 ~~l~~~~p--Div~~~~~~~~--~~~~~~~~-~-p~~~~~~~~~~~~-----------~~~~~~~~~d~ii~~S~~~~~~ 167 (374)
T 2xci_A 105 RFEELSKP--KALIVVEREFW--PSLIIFTK-V-PKILVNAYAKGSL-----------IEKILSKKFDLIIMRTQEDVEK 167 (374)
T ss_dssp HHHHHHCC--SEEEEESCCCC--HHHHHHCC-S-CEEEEEECCCCCH-----------HHHHHHTTCSEEEESCHHHHHH
T ss_pred HHHHHhCC--CEEEEECccCc--HHHHHHHh-C-CEEEEEeecCchH-----------HHHHHHHhCCEEEECCHHHHHH
Confidence 34566677 89998877765 34443322 2 5544433211111 2233 33589999999988776
Q ss_pred HHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCC
Q 003999 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKG 348 (780)
Q Consensus 269 Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KG 348 (780)
|.+ +|. . +|.++|+|. |..... + ++.+. +++++++++. .||
T Consensus 168 l~~-----~g~----------------~-ki~vi~n~~----f~~~~~-~---------~~~l~-~~vi~~~~~~--~k~ 208 (374)
T 2xci_A 168 FKT-----FGA----------------K-RVFSCGNLK----FICQKG-K---------GIKLK-GEFIVAGSIH--TGE 208 (374)
T ss_dssp HHT-----TTC----------------C-SEEECCCGG----GCCCCC-S---------CCCCS-SCEEEEEEEC--GGG
T ss_pred HHH-----cCC----------------C-eEEEcCCCc----cCCCcC-h---------hhhhc-CCEEEEEeCC--Cch
Confidence 642 122 1 456677652 221110 0 01111 2677777764 589
Q ss_pred hHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccC--CCCcccEEEecCCCCHHHHHH
Q 003999 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYG--SPNYEPVVLIDRPVPRFEKSA 426 (780)
Q Consensus 349 i~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g--~~~~~pV~~~~~~v~~~el~a 426 (780)
+..+++|+.++.+++|+++ |+++| ++++.. +++++++++.+-.+. ..+...|. +.+. .+|+..
T Consensus 209 ~~~ll~A~~~l~~~~p~~~----lvivG-----~g~~~~---~~l~~~~~~~gl~~~~~~~~~~~v~-~~~~--~~dl~~ 273 (374)
T 2xci_A 209 VEIILKAFKEIKKTYSSLK----LILVP-----RHIENA---KIFEKKARDFGFKTSFFENLEGDVI-LVDR--FGILKE 273 (374)
T ss_dssp HHHHHHHHHHHHTTCTTCE----EEEEE-----SSGGGH---HHHHHHHHHTTCCEEETTCCCSSEE-ECCS--SSCHHH
T ss_pred HHHHHHHHHHHHhhCCCcE----EEEEC-----CCHHHH---HHHHHHHHHCCCceEEecCCCCcEE-EECC--HHHHHH
Confidence 9999999999998999887 87776 244321 234444444432210 00001344 4443 478999
Q ss_pred HHHhcceeeecc-CCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc-CCCCccccC----CCcEEECCCCHH
Q 003999 427 YYAVAECCIVNA-VRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-EFIGCSPSL----SGAIRVNPWDID 500 (780)
Q Consensus 427 ly~~ADv~vvtS-~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l----~~al~VnP~d~~ 500 (780)
+|+.||++++|| ..|++|++++|||||| .|+|.+ ...|+.+.+ .+|.++.|.|++
T Consensus 274 ~y~~aDv~vl~ss~~e~gg~~~lEAmA~G-------------------~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~ 334 (374)
T 2xci_A 274 LYPVGKIAIVGGTFVNIGGHNLLEPTCWG-------------------IPVIYGPYTHKVNDLKEFLEKEGAGFEVKNET 334 (374)
T ss_dssp HGGGEEEEEECSSSSSSCCCCCHHHHTTT-------------------CCEEECSCCTTSHHHHHHHHHTTCEEECCSHH
T ss_pred HHHhCCEEEECCcccCCCCcCHHHHHHhC-------------------CCEEECCCccChHHHHHHHHHCCCEEEeCCHH
Confidence 999999988876 5577899999999997 477765 566676644 257888899999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 501 AVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
++|++|.++|++ +.++.+.++.++++.+
T Consensus 335 ~La~ai~~ll~d--~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 335 ELVTKLTELLSV--KKEIKVEEKSREIKGC 362 (374)
T ss_dssp HHHHHHHHHHHS--CCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhH--HHHHHHHHHHHHHHHh
Confidence 999999999985 3455555667777654
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.50 E-value=5.9e-14 Score=146.70 Aligned_cols=173 Identities=12% Similarity=0.119 Sum_probs=108.2
Q ss_pred ceEEeCCCCCCCCCCCCCCC-CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC----CceEEecCccEEeeCC
Q 003999 592 RAIFLDYDGTVVPETSIIKS-PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE----MLGIAAEHGYFIRWNK 666 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~-ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~----~lgliaenG~~ir~~~ 666 (780)
|+|++|+||||++ .++. ++++++++|++|++. |+.|+++|||+ ..+.+++..++ ..++|++||+.+...+
T Consensus 3 kli~~DlDGTLl~---~~~~~i~~~~~~al~~l~~~-G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~ 77 (261)
T 2rbk_A 3 KALFFDIDGTLVS---FETHRIPSSTIEALEAAHAK-GLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVGE 77 (261)
T ss_dssp CEEEECSBTTTBC---TTTSSCCHHHHHHHHHHHHT-TCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEETT
T ss_pred cEEEEeCCCCCcC---CCCCcCCHHHHHHHHHHHHC-CCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEECC
Confidence 7999999999999 5566 999999999999985 99999999999 88776665443 2368999999998743
Q ss_pred CCceEecCCCcChhHHHHHHHHHHHHHhcC--------CCceeecccceEE-EeeccCC----CC-----------ccc-
Q 003999 667 TSEWETNHLGADLEWKKIVEPVMRSYTEAT--------DGSNIEIKESALV-WHHQDAD----PD-----------FGS- 721 (780)
Q Consensus 667 ~~~w~~~~~~~d~~wk~~v~~i~~~~~e~t--------~gs~iE~k~~~l~-~hyr~ad----~d-----------~~~- 721 (780)
+..+.. ..+. +.+.++++...+.. .+.+++.....+. .+++... +. +..
T Consensus 78 ~~i~~~---~l~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 151 (261)
T 2rbk_A 78 EVIYKS---AIPQ---EEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMT 151 (261)
T ss_dssp EEEEEC---CCCH---HHHHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEE
T ss_pred EEEEec---CCCH---HHHHHHHHHHHHcCCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEE
Confidence 222332 2342 34555555444321 1222221100000 1111100 00 000
Q ss_pred -ccHHHHHHHHHHHhcCCCeEEE-EcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 722 -CQAKELLDHLESVLANEPAVVK-RGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 722 -~qa~el~~~L~~~l~~~~v~v~-~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
....+....+...+. .+.+. ++..++||.|.+++||.+++++++++|+++++|.
T Consensus 152 ~~~~~~~~~~~~~~~~--~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~ 207 (261)
T 2rbk_A 152 PFITEEEEKEVLPSIP--TCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETM 207 (261)
T ss_dssp ECCCHHHHHHHGGGST--TCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEE
T ss_pred EEeCHHHHHHHHHhcC--CeEEEEecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEE
Confidence 000111122332222 35654 5778999999999999999999999999987764
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2.8e-13 Score=140.92 Aligned_cols=170 Identities=14% Similarity=0.050 Sum_probs=101.6
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCC--
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKT-- 667 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~-- 667 (780)
.|+|++|+||||+ . +..++ +++++|++|++. |+.|+|+|||++..+..++..++ ..++|++||++++..++
T Consensus 2 ikli~~DlDGTLl-~---~~~~~-~~~~~l~~l~~~-g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~ 75 (249)
T 2zos_A 2 IRLIFLDIDKTLI-P---GYEPD-PAKPIIEELKDM-GFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYF 75 (249)
T ss_dssp EEEEEECCSTTTC-T---TSCSG-GGHHHHHHHHHT-TEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCC
T ss_pred ccEEEEeCCCCcc-C---CCCcH-HHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCcc
Confidence 3799999999999 3 23444 499999999984 99999999999999999887653 34799999999987632
Q ss_pred ----------CceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecc--------cceEEEee------ccCCCCccccc
Q 003999 668 ----------SEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIK--------ESALVWHH------QDADPDFGSCQ 723 (780)
Q Consensus 668 ----------~~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k--------~~~l~~hy------r~ad~d~~~~q 723 (780)
..+... ...+ .+.+.++++.+.+.. +...... ...+.+.. +.....+....
T Consensus 76 ~~~~~~~~~~~~~i~~-~~l~---~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (249)
T 2zos_A 76 PFDVKGKEVGNYIVIE-LGIR---VEKIREELKKLENIY-GLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWS 150 (249)
T ss_dssp C------CCCCCCEEE-CSCC---HHHHHHHHHHHHHHH-TCEEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEEECS
T ss_pred cccccccccCceEEEe-cCCC---HHHHHHHHHHHHhhc-CEEEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceEecC
Confidence 122211 1233 233444444433210 0000000 00000000 00000000000
Q ss_pred HHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCC-CCCcc
Q 003999 724 AKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCV-RARAC 776 (780)
Q Consensus 724 a~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i-~~~~~ 776 (780)
.++..+.+.. .++.+.++..++||.| |+|||.|+++|++.+++ ++++|
T Consensus 151 ~~~~~~~l~~----~~~~~~~s~~~~ei~~-g~sKg~al~~l~~~~~~~~~~~v 199 (249)
T 2zos_A 151 RDGWEEVLVE----GGFKVTMGSRFYTVHG-NSDKGKAAKILLDFYKRLGQIES 199 (249)
T ss_dssp SSCHHHHHHH----TTCEEEECSSSEEEEC-SCCHHHHHHHHHHHHHTTSCEEE
T ss_pred CHHHHHHHHh----CCEEEEecCCeEEEeC-CCChHHHHHHHHHHhccCCCceE
Confidence 0011223332 2467667678999999 99999999999999998 77554
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.41 E-value=1e-11 Score=138.13 Aligned_cols=253 Identities=17% Similarity=0.151 Sum_probs=159.2
Q ss_pred HHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhh--cCCEEEeecHHHH
Q 003999 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIGFHTFDYA 266 (780)
Q Consensus 189 ~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~Dligf~t~~y~ 266 (780)
.++.+..+| |+|++|+.-...+|..+..+..++|++. +|.+..+...+ -|+.+++.+-+. .+|++-..+....
T Consensus 104 ~~~l~~~kP--DvVi~~g~~~~~~~~~~aa~~~~IPv~h-~~ag~rs~~~~--~~~~~~~~r~~~~~~a~~~~~~se~~~ 178 (396)
T 3dzc_A 104 QQVLSSEQP--DVVLVHGDTATTFAASLAAYYQQIPVGH-VEAGLRTGNIY--SPWPEEGNRKLTAALTQYHFAPTDTSR 178 (396)
T ss_dssp HHHHHHHCC--SEEEEETTSHHHHHHHHHHHTTTCCEEE-ETCCCCCSCTT--SSTTHHHHHHHHHHTCSEEEESSHHHH
T ss_pred HHHHHhcCC--CEEEEECCchhHHHHHHHHHHhCCCEEE-EECCccccccc--cCCcHHHHHHHHHHhcCEEECCCHHHH
Confidence 344556688 8999998766666655555566888764 33333332222 245567777653 4799988998888
Q ss_pred HHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeec-CCCchhhhhhcCCchhHHHHHHHHHHcC----CCeE-EEEe
Q 003999 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPV-GVHMGRLESVLNLPATATKIKEIEKQFD----GKKL-ILGI 340 (780)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~-GId~~~~~~~~~~~~~~~~~~~lr~~~~----~~~v-il~V 340 (780)
++|.+ .|+.. .+|.++++ ++|.-.+..... ........++++++. ++++ ++..
T Consensus 179 ~~l~~-----~G~~~---------------~ki~vvGn~~~d~~~~~~~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv~~ 237 (396)
T 3dzc_A 179 ANLLQ-----ENYNA---------------ENIFVTGNTVIDALLAVREKI-HTDMDLQATLESQFPMLDASKKLILVTG 237 (396)
T ss_dssp HHHHH-----TTCCG---------------GGEEECCCHHHHHHHHHHHHH-HHCHHHHHHHHHTCTTCCTTSEEEEEEC
T ss_pred HHHHH-----cCCCc---------------CcEEEECCcHHHHHHHhhhhc-ccchhhHHHHHHHhCccCCCCCEEEEEE
Confidence 77764 34421 12444443 455433221000 000011256777763 3554 4556
Q ss_pred ccccc-cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCC
Q 003999 341 DDMDI-FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419 (780)
Q Consensus 341 drld~-~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v 419 (780)
+|... -||+..+++|++++.+++|+++ +|.++.+ ++. +++.++++. +. ...|+++ +++
T Consensus 238 hR~~~~~~~~~~ll~A~~~l~~~~~~~~----~v~~~g~----~~~---~~~~l~~~~-------~~--~~~v~~~-~~l 296 (396)
T 3dzc_A 238 HRRESFGGGFERICQALITTAEQHPECQ----ILYPVHL----NPN---VREPVNKLL-------KG--VSNIVLI-EPQ 296 (396)
T ss_dssp SCBCCCTTHHHHHHHHHHHHHHHCTTEE----EEEECCB----CHH---HHHHHHHHT-------TT--CTTEEEE-CCC
T ss_pred CCcccchhHHHHHHHHHHHHHHhCCCce----EEEEeCC----ChH---HHHHHHHHH-------cC--CCCEEEe-CCC
Confidence 67553 4889999999999999999865 5544322 132 333344331 11 1246655 578
Q ss_pred CHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc-CCCCccccC-CC-cEEECC
Q 003999 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-EFIGCSPSL-SG-AIRVNP 496 (780)
Q Consensus 420 ~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l-~~-al~VnP 496 (780)
+..++..+|+.||++|.+| | |++ .||++||. |+|++ +.++..+.+ .| +++|.+
T Consensus 297 g~~~~~~l~~~ad~vv~~S---G-g~~-~EA~a~G~-------------------PvV~~~~~~~~~e~v~~G~~~lv~~ 352 (396)
T 3dzc_A 297 QYLPFVYLMDRAHIILTDS---G-GIQ-EEAPSLGK-------------------PVLVMRETTERPEAVAAGTVKLVGT 352 (396)
T ss_dssp CHHHHHHHHHHCSEEEESC---S-GGG-TTGGGGTC-------------------CEEECCSSCSCHHHHHHTSEEECTT
T ss_pred CHHHHHHHHHhcCEEEECC---c-cHH-HHHHHcCC-------------------CEEEccCCCcchHHHHcCceEEcCC
Confidence 8889999999999999998 6 655 99999974 77777 555555444 24 666665
Q ss_pred CCHHHHHHHHHHHHcCC
Q 003999 497 WDIDAVADAMTLAINMR 513 (780)
Q Consensus 497 ~d~~~~A~ai~~aL~m~ 513 (780)
|.++++++|.++|+.+
T Consensus 353 -d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 353 -NQQQICDALSLLLTDP 368 (396)
T ss_dssp -CHHHHHHHHHHHHHCH
T ss_pred -CHHHHHHHHHHHHcCH
Confidence 8999999999999865
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=2.2e-13 Score=142.29 Aligned_cols=171 Identities=15% Similarity=0.075 Sum_probs=103.7
Q ss_pred eEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCC----
Q 003999 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTS---- 668 (780)
Q Consensus 593 lI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~---- 668 (780)
+|+||+||||++ .. .++++++++|++|++ .|+.|+++|||+...+. .++ + ..++|++||+.+......
T Consensus 2 li~~DlDGTLl~---~~-~i~~~~~~al~~l~~-~Gi~v~iaTGR~~~~~~-~l~-~-~~~~i~~nGa~i~~~~~~~~~~ 73 (259)
T 3zx4_A 2 IVFTDLDGTLLD---ER-GELGPAREALERLRA-LGVPVVPVTAKTRKEVE-ALG-L-EPPFIVENGGGLYLPRDWPVRA 73 (259)
T ss_dssp EEEECCCCCCSC---SS-SSCSTTHHHHHHHHH-TTCCEEEBCSSCHHHHH-HTT-C-CSSEEEGGGTEEEEETTCSSCC
T ss_pred EEEEeCCCCCcC---CC-cCCHHHHHHHHHHHH-CCCeEEEEeCCCHHHHH-HcC-C-CCcEEEECCcEEEeCCCCcccc
Confidence 799999999999 55 788899999999998 59999999999999998 443 2 356999999999887543
Q ss_pred ------ceEecCCCcChhHHHHHHHHHHHHHhc---CCCceeecc------cceEEEeec--cCCCCcc------cccHH
Q 003999 669 ------EWETNHLGADLEWKKIVEPVMRSYTEA---TDGSNIEIK------ESALVWHHQ--DADPDFG------SCQAK 725 (780)
Q Consensus 669 ------~w~~~~~~~d~~wk~~v~~i~~~~~e~---t~gs~iE~k------~~~l~~hyr--~ad~d~~------~~qa~ 725 (780)
.+.. ....+. +.+.++++.+.+. .-..+.... ...+..... ....++. .....
T Consensus 74 ~~~~~~~~~~-~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (259)
T 3zx4_A 74 GRPKGGYRVV-SLAWPY---RKVRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDETLVLCPEEVE 149 (259)
T ss_dssp SEEETTEEEE-ECSCCH---HHHHHHHHHHHHHHTSCCCBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEEBCCCTTTHH
T ss_pred cccCCceEEE-EcCCCH---HHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHcCCCHHHhhhhhccccceeEEeCcHHHH
Confidence 1211 112332 3334444433321 000000000 000000000 0000000 00123
Q ss_pred HHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCC--Ccc-ccCC
Q 003999 726 ELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVRA--RAC-KLDD 780 (780)
Q Consensus 726 el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~--~~~-~~~~ 780 (780)
++.+.+. ..++.++.+..++||.|+ ++||.+++++++++++++ .+| .+||
T Consensus 150 ~~~~~l~----~~~~~~~~s~~~~ei~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD 202 (259)
T 3zx4_A 150 AVLEALE----AVGLEWTHGGRFYHAAKG-ADKGRAVARLRALWPDPEEARFAVGLGD 202 (259)
T ss_dssp HHHHHHH----HTTCEEEECSSSEEEESS-CCHHHHHHHHHHTCSSHHHHTSEEEEES
T ss_pred HHHHHHH----HCCcEEEecCceEEEcCC-CCHHHHHHHHHHHhCCCCCCceEEEEeC
Confidence 3333333 335777777777899999 999999999999999986 544 4443
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.6e-10 Score=128.81 Aligned_cols=249 Identities=13% Similarity=0.148 Sum_probs=155.9
Q ss_pred HHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhc--CCEEEeecHHHH
Q 003999 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLN--CDLIGFHTFDYA 266 (780)
Q Consensus 189 ~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~--~Dligf~t~~y~ 266 (780)
.++.+..+| |+|++|+.-...++..+..+..++|++. .+.+.-+...+ -|+++++.+.++. +|++-..+..+.
T Consensus 107 ~~~l~~~kP--D~Vi~~gd~~~~l~~~laA~~~~IPv~h-~~aglrs~~~~--~~~p~~~~r~~~~~~a~~~~~~se~~~ 181 (403)
T 3ot5_A 107 NEVIAAENP--DIVLVHGDTTTSFAAGLATFYQQKMLGH-VEAGLRTWNKY--SPFPEEMNRQLTGVMADIHFSPTKQAK 181 (403)
T ss_dssp HHHHHHHCC--SEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCSCTT--SSTTHHHHHHHHHHHCSEEEESSHHHH
T ss_pred HHHHHHcCC--CEEEEECCchhHHHHHHHHHHhCCCEEE-EECCccccccc--cCCcHHHHHHHHHHhcCEEECCCHHHH
Confidence 344566688 8999999765556544444556788753 34333222222 1455666666543 799888899888
Q ss_pred HHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeec-CCCchhhhhhcCCchhHHHHHHHHHHcCC-CeEEEEecccc
Q 003999 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPV-GVHMGRLESVLNLPATATKIKEIEKQFDG-KKLILGIDDMD 344 (780)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~-GId~~~~~~~~~~~~~~~~~~~lr~~~~~-~~vil~Vdrld 344 (780)
++|.+ .|+.. .+|.++++ ++|...+..... .. .++++++++ +.+++.++|..
T Consensus 182 ~~l~~-----~Gi~~---------------~~i~vvGn~~~D~~~~~~~~~--~~----~~~~~~l~~~~~vlv~~~r~~ 235 (403)
T 3ot5_A 182 ENLLA-----EGKDP---------------ATIFVTGNTAIDALKTTVQKD--YH----HPILENLGDNRLILMTAHRRE 235 (403)
T ss_dssp HHHHH-----TTCCG---------------GGEEECCCHHHHHHHHHSCTT--CC----CHHHHSCTTCEEEEECCCCHH
T ss_pred HHHHH-----cCCCc---------------ccEEEeCCchHHHHHhhhhhh--cc----hHHHHhccCCCEEEEEeCccc
Confidence 88864 35421 12344443 566544322100 00 122333433 44566788875
Q ss_pred c-cCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHH
Q 003999 345 I-FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFE 423 (780)
Q Consensus 345 ~-~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~e 423 (780)
. -||+...++|+.++.+++|+++ +|.++.|. + .+++.+++.. +. ...|.++ ++++..+
T Consensus 236 ~~~~~l~~ll~a~~~l~~~~~~~~----~v~~~~~~----~---~~~~~l~~~~-------~~--~~~v~l~-~~l~~~~ 294 (403)
T 3ot5_A 236 NLGEPMQGMFEAVREIVESREDTE----LVYPMHLN----P---AVREKAMAIL-------GG--HERIHLI-EPLDAID 294 (403)
T ss_dssp HHTTHHHHHHHHHHHHHHHCTTEE----EEEECCSC----H---HHHHHHHHHH-------TT--CTTEEEE-CCCCHHH
T ss_pred ccCcHHHHHHHHHHHHHHhCCCce----EEEecCCC----H---HHHHHHHHHh-------CC--CCCEEEe-CCCCHHH
Confidence 4 3789999999999999999865 55443321 2 2233333321 11 1246655 5788889
Q ss_pred HHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc-CCCCccccC--CCcEEECCCCHH
Q 003999 424 KSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-EFIGCSPSL--SGAIRVNPWDID 500 (780)
Q Consensus 424 l~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l--~~al~VnP~d~~ 500 (780)
+..+|+.||++|.+| | -+..||++|+. |+|++ ..++..+.+ +.+++|.+ |.+
T Consensus 295 ~~~l~~~ad~vv~~S---G--g~~~EA~a~g~-------------------PvV~~~~~~~~~e~v~~g~~~lv~~-d~~ 349 (403)
T 3ot5_A 295 FHNFLRKSYLVFTDS---G--GVQEEAPGMGV-------------------PVLVLRDTTERPEGIEAGTLKLIGT-NKE 349 (403)
T ss_dssp HHHHHHHEEEEEECC---H--HHHHHGGGTTC-------------------CEEECCSSCSCHHHHHHTSEEECCS-CHH
T ss_pred HHHHHHhcCEEEECC---c--cHHHHHHHhCC-------------------CEEEecCCCcchhheeCCcEEEcCC-CHH
Confidence 999999999998888 2 34499999974 77777 555554444 24677776 999
Q ss_pred HHHHHHHHHHcCCH
Q 003999 501 AVADAMTLAINMRD 514 (780)
Q Consensus 501 ~~A~ai~~aL~m~~ 514 (780)
+++++|.++|+.++
T Consensus 350 ~l~~ai~~ll~~~~ 363 (403)
T 3ot5_A 350 NLIKEALDLLDNKE 363 (403)
T ss_dssp HHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHcCHH
Confidence 99999999998653
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.1e-10 Score=121.31 Aligned_cols=177 Identities=15% Similarity=0.110 Sum_probs=112.9
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHH-------hccCCCCEEEEEcCCChhhHHHHhccCC----CceEEecC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKT-------LCSDPNNTVFIVSGRGRSSLSEWLAPCE----MLGIAAEH 658 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~-------L~~d~g~~V~IvSGR~~~~L~~~f~~l~----~lgliaen 658 (780)
..++|+||+||||++ .. +++++..+|.+ +..++++.++++|||+...+..++..+. ...+++.+
T Consensus 21 ~~kliifDlDGTLld---s~--i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~~~ 95 (289)
T 3gyg_A 21 PQYIVFCDFDETYFP---HT--IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIASDL 95 (289)
T ss_dssp CSEEEEEETBTTTBC---SS--CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCCBCCSEEEETT
T ss_pred CCeEEEEECCCCCcC---CC--CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccCCCCCeEeecC
Confidence 468999999999999 33 66666666662 4444699999999999999988876541 23478888
Q ss_pred ccEEeeCC---CC----ceEecCCCcChhHHHHHHHHHHHHHhcC-----CCceeecccceEEEeeccCCCCcccccHHH
Q 003999 659 GYFIRWNK---TS----EWETNHLGADLEWKKIVEPVMRSYTEAT-----DGSNIEIKESALVWHHQDADPDFGSCQAKE 726 (780)
Q Consensus 659 G~~ir~~~---~~----~w~~~~~~~d~~wk~~v~~i~~~~~e~t-----~gs~iE~k~~~l~~hyr~ad~d~~~~qa~e 726 (780)
|..+.... .. .|...... . -.++.+.++++.+.+.. ..+..+.+...+.++|+..++.. ..+
T Consensus 96 g~~i~~~~~ng~~~~~~~~~~~~~~-~-~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~----~~~ 169 (289)
T 3gyg_A 96 GTEITYFSEHNFGQQDNKWNSRINE-G-FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEIN----DKK 169 (289)
T ss_dssp TTEEEECCSSSTTEECHHHHHHHHT-T-CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHH----HHH
T ss_pred CceEEEEcCCCcEeecCchhhhhcc-c-CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEecccccc----chH
Confidence 87776632 11 11110000 0 11345677777765541 22223444456778887764321 122
Q ss_pred HHHHHHHHhcCCCeE--EEE---------cCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 727 LLDHLESVLANEPAV--VKR---------GQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 727 l~~~L~~~l~~~~v~--v~~---------g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
....+...+...++. +.. +..++|+.|.+.+|+.+++++++.+|+++.+|.
T Consensus 170 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~ 231 (289)
T 3gyg_A 170 NLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAI 231 (289)
T ss_dssp HHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHHHHcCCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEE
Confidence 233444444444443 333 237899999999999999999999999997764
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=98.70 E-value=6.3e-07 Score=99.12 Aligned_cols=245 Identities=12% Similarity=0.056 Sum_probs=145.3
Q ss_pred HHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhh--cCCEEEeecHHHH
Q 003999 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIGFHTFDYA 266 (780)
Q Consensus 189 ~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~Dligf~t~~y~ 266 (780)
.++.+..+| |+|.+|+.-...++ .+..+..++|+++ ++.+.-+.+ .++.+++.+-+. .+|++-..+..+.
T Consensus 87 ~~~l~~~kP--D~Vlv~gd~~~~~a-alaA~~~~IPv~h-~eaglrs~~----~~~pee~nR~~~~~~a~~~~~~te~~~ 158 (385)
T 4hwg_A 87 DEVLEKEKP--DAVLFYGDTNSCLS-AIAAKRRKIPIFH-MEAGNRCFD----QRVPEEINRKIIDHISDVNITLTEHAR 158 (385)
T ss_dssp HHHHHHHCC--SEEEEESCSGGGGG-HHHHHHTTCCEEE-ESCCCCCSC----TTSTHHHHHHHHHHHCSEEEESSHHHH
T ss_pred HHHHHhcCC--cEEEEECCchHHHH-HHHHHHhCCCEEE-EeCCCcccc----ccCcHHHHHHHHHhhhceeecCCHHHH
Confidence 345566788 89999986545455 4444456788753 344432211 133455655554 3788888888888
Q ss_pred HHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEee-cCCCchhhhhhcCCchhHHHHHHHHHHcC---CCeEEEEecc
Q 003999 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILP-VGVHMGRLESVLNLPATATKIKEIEKQFD---GKKLILGIDD 342 (780)
Q Consensus 267 ~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P-~GId~~~~~~~~~~~~~~~~~~~lr~~~~---~~~vil~Vdr 342 (780)
++|++ .|+..+ +|.+.+ +++|.-.+.. ......+++++++ ++.+++..+|
T Consensus 159 ~~l~~-----~G~~~~---------------~I~vtGnp~~D~~~~~~------~~~~~~~~~~~lgl~~~~~iLvt~hr 212 (385)
T 4hwg_A 159 RYLIA-----EGLPAE---------------LTFKSGSHMPEVLDRFM------PKILKSDILDKLSLTPKQYFLISSHR 212 (385)
T ss_dssp HHHHH-----TTCCGG---------------GEEECCCSHHHHHHHHH------HHHHHCCHHHHTTCCTTSEEEEEECC
T ss_pred HHHHH-----cCCCcC---------------cEEEECCchHHHHHHhh------hhcchhHHHHHcCCCcCCEEEEEeCC
Confidence 88764 354211 233332 3455332211 0111234566663 4556666777
Q ss_pred cc---ccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHH-hhccCCCCcccEEEecCC
Q 003999 343 MD---IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRI-NEVYGSPNYEPVVLIDRP 418 (780)
Q Consensus 343 ld---~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~I-n~~~g~~~~~pV~~~~~~ 418 (780)
.. ..|++...++|++++.+++ +++ +|... ++. ++ +.+++. +. .+ ....|.+ .++
T Consensus 213 ~e~~~~~~~l~~ll~al~~l~~~~-~~~----vv~p~------~p~---~~----~~l~~~~~~-~~--~~~~v~l-~~~ 270 (385)
T 4hwg_A 213 EENVDVKNNLKELLNSLQMLIKEY-NFL----IIFST------HPR---TK----KRLEDLEGF-KE--LGDKIRF-LPA 270 (385)
T ss_dssp C-----CHHHHHHHHHHHHHHHHH-CCE----EEEEE------CHH---HH----HHHHTSGGG-GG--TGGGEEE-CCC
T ss_pred chhcCcHHHHHHHHHHHHHHHhcC-CeE----EEEEC------ChH---HH----HHHHHHHHH-hc--CCCCEEE-EcC
Confidence 54 4478999999999998766 543 43322 122 22 222222 10 11 1234664 457
Q ss_pred CCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEc-CCCCccccC-CC-cEEEC
Q 003999 419 VPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-EFIGCSPSL-SG-AIRVN 495 (780)
Q Consensus 419 v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l-~~-al~Vn 495 (780)
++..++..+|+.||+++..| |.+..||+++|. |+|+. +.++..+.+ .| +++|.
T Consensus 271 lg~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~-------------------Pvv~~~~~ter~e~v~~G~~~lv~ 326 (385)
T 4hwg_A 271 FSFTDYVKLQMNAFCILSDS-----GTITEEASILNL-------------------PALNIREAHERPEGMDAGTLIMSG 326 (385)
T ss_dssp CCHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTC-------------------CEEECSSSCSCTHHHHHTCCEECC
T ss_pred CCHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCC-------------------CEEEcCCCccchhhhhcCceEEcC
Confidence 88889999999999999777 446799999974 45553 333333444 24 56675
Q ss_pred CCCHHHHHHHHHHHHcCCH
Q 003999 496 PWDIDAVADAMTLAINMRD 514 (780)
Q Consensus 496 P~d~~~~A~ai~~aL~m~~ 514 (780)
+ |.+++++++.++|+++.
T Consensus 327 ~-d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 327 F-KAERVLQAVKTITEEHD 344 (385)
T ss_dssp S-SHHHHHHHHHHHHTTCB
T ss_pred C-CHHHHHHHHHHHHhChH
Confidence 5 99999999999998764
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=4.8e-07 Score=98.28 Aligned_cols=246 Identities=11% Similarity=0.044 Sum_probs=146.9
Q ss_pred HHHHcCCCCCEEEEeCCccc--hHH-HHHHHh-cCCCcEEEEEeCCCCChhHhhcCCChHHHHH-hhhcCCEEEeecHHH
Q 003999 191 VMEVINPDDDCVWVHDYHLM--VLP-TFLRKR-FNRIKLGFFLHSPFPSSEIYRTLPVRDEILR-GLLNCDLIGFHTFDY 265 (780)
Q Consensus 191 v~~~~~~~~DiVwvhDyhl~--llp-~~lr~~-~~~~~i~~flH~PfP~~e~~~~lp~r~eil~-~ll~~Dligf~t~~y 265 (780)
+...+++ .|+|.+|-..+. .++ .++++. ..++|+.+..|--||-. +..-+.....-+ .+-.||.|..++...
T Consensus 68 ~~~~~~~-~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~--~~~~~~~~~~E~~~y~~aD~Ii~~S~~~ 144 (339)
T 3rhz_A 68 IVAGLRH-GDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLM--FSGNFYLMDRTIAYYNKADVVVAPSQKM 144 (339)
T ss_dssp HTTTCCT-TCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHH--CGGGGGGHHHHHHHHTTCSEEEESCHHH
T ss_pred HHhcCCC-CCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhh--CccchhhHHHHHHHHHHCCEEEECCHHH
Confidence 4445554 599999876543 222 234442 13899999999877622 100011111112 244699999999876
Q ss_pred HHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCC-CchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEecccc
Q 003999 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGV-HMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMD 344 (780)
Q Consensus 266 ~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GI-d~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld 344 (780)
.+.+.+ .|+.. .+| .+.++ |.. .. .+. ....++++|+++||+.
T Consensus 145 ~~~l~~-----~G~~~---------------~ki--~~~~~~~~~--~~---~~~---------~~~~~~~~i~yaG~l~ 188 (339)
T 3rhz_A 145 IDKLRD-----FGMNV---------------SKT--VVQGMWDHP--TQ---APM---------FPAGLKREIHFPGNPE 188 (339)
T ss_dssp HHHHHH-----TTCCC---------------SEE--EECCSCCCC--CC---CCC---------CCCEEEEEEEECSCTT
T ss_pred HHHHHH-----cCCCc---------------Cce--eecCCCCcc--Cc---ccc---------cccCCCcEEEEeCCcc
Confidence 665543 23320 122 23333 211 00 000 0113468999999998
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHH
Q 003999 345 IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEK 424 (780)
Q Consensus 345 ~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el 424 (780)
...++.. + .|+++ |+.+|... +. +.+ .|+|+ |.+|.+|+
T Consensus 189 k~~~L~~-------l---~~~~~----f~ivG~G~-----~~----------------~l~-----nV~f~-G~~~~~el 227 (339)
T 3rhz_A 189 RFSFVKE-------W---KYDIP----LKVYTWQN-----VE----------------LPQ-----NVHKI-NYRPDEQL 227 (339)
T ss_dssp TCGGGGG-------C---CCSSC----EEEEESCC-----CC----------------CCT-----TEEEE-ECCCHHHH
T ss_pred hhhHHHh-------C---CCCCe----EEEEeCCc-----cc----------------CcC-----CEEEe-CCCCHHHH
Confidence 5332221 1 46666 88888432 10 011 37755 68999999
Q ss_pred HHHHHhcceeeeccCCcC---------CCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC---CcE
Q 003999 425 SAYYAVAECCIVNAVRDG---------MNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAI 492 (780)
Q Consensus 425 ~aly~~ADv~vvtS~rEG---------mnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~al 492 (780)
.++|+.||+.++. .+| ++....|||||| .|+|++..++.++.+. .|+
T Consensus 228 ~~~l~~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~G-------------------~PVI~~~~~~~~~~v~~~~~G~ 286 (339)
T 3rhz_A 228 LMEMSQGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAAG-------------------IPVIVQEGIANQELIENNGLGW 286 (339)
T ss_dssp HHHHHTEEEEECC--CCGGGHHHHTTCCCHHHHHHHHHT-------------------CCEEEETTCTTTHHHHHHTCEE
T ss_pred HHHHHhCCEEEEE--CCCchhHHHHhcChHHHHHHHHcC-------------------CCEEEccChhHHHHHHhCCeEE
Confidence 9999999998887 233 467789999997 4889999888887772 378
Q ss_pred EECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHH
Q 003999 493 RVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (780)
Q Consensus 493 ~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~ 542 (780)
.++ +.++++++|.. +.+++++.+.+..+++..+....+.++.-+.
T Consensus 287 ~~~--~~~e~~~~i~~---l~~~~~~~m~~na~~~a~~~~~~~f~k~~l~ 331 (339)
T 3rhz_A 287 IVK--DVEEAIMKVKN---VNEDEYIELVKNVRSFNPILRKGFFTRRLLT 331 (339)
T ss_dssp EES--SHHHHHHHHHH---CCHHHHHHHHHHHHHHTHHHHTTHHHHHHHH
T ss_pred EeC--CHHHHHHHHHH---hCHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 887 57888888875 3455666655666666555444444444443
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.47 E-value=1.6e-07 Score=88.77 Aligned_cols=68 Identities=24% Similarity=0.266 Sum_probs=51.3
Q ss_pred CceEEeCCCCCCCCCCC-CCCCCCHHHHHHHHHhccCCCCEEEEEcCCC---hhhHHHHhccCC-CceEEecCc
Q 003999 591 RRAIFLDYDGTVVPETS-IIKSPGPEVISVLKTLCSDPNNTVFIVSGRG---RSSLSEWLAPCE-MLGIAAEHG 659 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~-~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~---~~~L~~~f~~l~-~lgliaenG 659 (780)
.++|++|+||||++... ....+.+.++++|++|++. |+.|+|+|||+ ...+.+|+.... ...+++.|+
T Consensus 3 ~k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~~~-G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~n~ 75 (142)
T 2obb_A 3 AMTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQE-KHRLILWSVREGELLDEAIEWCRARGLEFYAANKDY 75 (142)
T ss_dssp CCEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHT-TCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESSSS
T ss_pred CeEEEEECcCCCCCCCCccccccCHHHHHHHHHHHHC-CCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEcCC
Confidence 57999999999998431 1123456899999999985 99999999998 567778887642 234666664
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.22 E-value=2.1e-06 Score=89.15 Aligned_cols=68 Identities=15% Similarity=0.142 Sum_probs=51.9
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcC---CChhhHHHHhccCC----CceEEecCccEE
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG---RGRSSLSEWLAPCE----MLGIAAEHGYFI 662 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~f~~l~----~lgliaenG~~i 662 (780)
+.|+|+||+||||++ . +.++++++++|++|.+. |++|+++|| |+...+.+.+..+. .-++++.||..+
T Consensus 5 ~~kli~~DlDGTLl~---~-~~~~~~~~~ai~~l~~~-Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~ 79 (266)
T 3pdw_A 5 TYKGYLIDLDGTMYN---G-TEKIEEACEFVRTLKDR-GVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSMATA 79 (266)
T ss_dssp CCSEEEEECSSSTTC---H-HHHHHHHHHHHHHHHHT-TCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHH
T ss_pred cCCEEEEeCcCceEe---C-CEeCccHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHccCHHHHHH
Confidence 468999999999998 3 44667899999999995 999999988 77777777776542 124666666544
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=9e-07 Score=92.01 Aligned_cols=68 Identities=19% Similarity=0.181 Sum_probs=54.4
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc---CCChhhHHHHhccCC----CceEEecCccEE
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAPCE----MLGIAAEHGYFI 662 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~f~~l~----~lgliaenG~~i 662 (780)
+.+.|++|+||||++. ..+++.++++|++|.+. |+.|+++| ||++..+.+.+..+. .-.++++||..+
T Consensus 16 ~~~~v~~DlDGTLl~~----~~~~~~~~~~l~~l~~~-G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~~~~~~ 90 (271)
T 1vjr_A 16 KIELFILDMDGTFYLD----DSLLPGSLEFLETLKEK-NKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEITA 90 (271)
T ss_dssp GCCEEEECCBTTTEET----TEECTTHHHHHHHHHHT-TCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHHH
T ss_pred CCCEEEEcCcCcEEeC----CEECcCHHHHHHHHHHc-CCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcHHHHHH
Confidence 4679999999999983 44678899999999985 99999999 999999988887642 113677777654
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=98.07 E-value=0.00028 Score=83.46 Aligned_cols=151 Identities=10% Similarity=0.050 Sum_probs=104.0
Q ss_pred CCCeEEEEeccccccCChHHH-HHHHHHHH--HhCCCCCC-ceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCC
Q 003999 332 DGKKLILGIDDMDIFKGISLK-LLAMEQLL--QQHPGMRG-KVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSP 407 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~-l~A~~~ll--~~~P~~~~-~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~ 407 (780)
++..++..|.|+...||..+. |..+++++ ..+|+..- .+++|..|....+. .....+-+.+.++++.+|..-...
T Consensus 548 pd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~Dp~v~ 626 (824)
T 2gj4_A 548 PNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNHDPVVG 626 (824)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTTCTTTG
T ss_pred CCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhccCcccC
Confidence 367899999999999999998 88888875 36765321 35676555443222 333456667888888887543323
Q ss_pred CcccEEEecCCCCHHHHHHHHHhcceeeeccC--CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc
Q 003999 408 NYEPVVLIDRPVPRFEKSAYYAVAECCIVNAV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (780)
Q Consensus 408 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~--rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (780)
+.-.|+|+. ..+..--..+|.+||+++.||. .|.-|+.-+-||.- |.|-+|..-|+.
T Consensus 627 ~~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN--------------------GaLtigtlDGan 685 (824)
T 2gj4_A 627 DRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN--------------------GALTIGTMDGAN 685 (824)
T ss_dssp GGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT--------------------TCEEEECSCTTH
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc--------------------CceEEEEecCcc
Confidence 333588776 3455556678999999999999 89999998888874 456666666765
Q ss_pred ccC----C--CcEEECCCCHHHHHHHH
Q 003999 486 PSL----S--GAIRVNPWDIDAVADAM 506 (780)
Q Consensus 486 ~~l----~--~al~VnP~d~~~~A~ai 506 (780)
.++ + +++++... .+++ +++
T Consensus 686 vEi~e~vG~~Ngf~FG~~-~~ev-~~l 710 (824)
T 2gj4_A 686 VEMAEEAGEENFFIFGMR-VEDV-DRL 710 (824)
T ss_dssp HHHHHHHCGGGSEECSCC-HHHH-HHH
T ss_pred chhhhccCCCCEEEeCCc-HHHH-HHH
Confidence 332 2 37888775 6666 444
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=98.06 E-value=3.6e-06 Score=77.87 Aligned_cols=49 Identities=20% Similarity=0.310 Sum_probs=40.0
Q ss_pred ceEEeCCCCCCCCCCCCC---CCCCHHHHHHHHHhccCCCCEEEEEcCCChhh
Q 003999 592 RAIFLDYDGTVVPETSII---KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS 641 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~---~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~ 641 (780)
|+|++|+||||++..... ..+++.+.++|++|.+. |+.++|+|||+...
T Consensus 2 k~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~-Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQL-GFEIVISTARNMRT 53 (126)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHT-TCEEEEEECTTTTT
T ss_pred CEEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhC-CCeEEEEeCCChhh
Confidence 799999999999832110 15779999999999984 99999999999754
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=0.00023 Score=83.90 Aligned_cols=149 Identities=13% Similarity=0.048 Sum_probs=104.4
Q ss_pred CCCeEEEEeccccccCChHH-HHHHHHHHHH--hCCCCC-CceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCC
Q 003999 332 DGKKLILGIDDMDIFKGISL-KLLAMEQLLQ--QHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSP 407 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~-~l~A~~~ll~--~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~ 407 (780)
++..+++.|.|+...||..+ .|..++++++ .+|+.. ..+++|..|....+. .....+-+.+..+++.||..-...
T Consensus 524 pd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~Dp~~~ 602 (796)
T 1l5w_A 524 PQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINNDPLVG 602 (796)
T ss_dssp TTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTG
T ss_pred CCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhccccccC
Confidence 36788999999999999999 8888888765 466521 246777655443222 333456667888888888642222
Q ss_pred CcccEEEecCCCCHHHHHHHHHhcceeeeccC--CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc
Q 003999 408 NYEPVVLIDRPVPRFEKSAYYAVAECCIVNAV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (780)
Q Consensus 408 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~--rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (780)
+.-.|+|+. .....--..+|.+||+++.||. .|.-|+.-+-||.- |.|-+|..-|+-
T Consensus 603 ~~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N--------------------GaL~iGtLDGan 661 (796)
T 1l5w_A 603 DKLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN--------------------GALTVGTLDGAN 661 (796)
T ss_dssp GGEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT--------------------TCEEEECSCTTH
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc--------------------CCeeecCcCCee
Confidence 223488775 3455666678999999999999 89999998888874 456667777765
Q ss_pred ccC------CCcEEECCCCHHHHH
Q 003999 486 PSL------SGAIRVNPWDIDAVA 503 (780)
Q Consensus 486 ~~l------~~al~VnP~d~~~~A 503 (780)
.++ .+++++-. +.+++.
T Consensus 662 vEi~e~vG~~NgF~FG~-~~~ev~ 684 (796)
T 1l5w_A 662 VEIAEKVGEENIFIFGH-TVEQVK 684 (796)
T ss_dssp HHHHHHHCGGGSEECSC-CHHHHH
T ss_pred eehhhccCCCcEEEecC-CHHHHH
Confidence 443 24788877 777765
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=98.01 E-value=0.00012 Score=86.39 Aligned_cols=151 Identities=10% Similarity=0.087 Sum_probs=105.4
Q ss_pred CCCeEEEEeccccccCChHH-HHHHHHHHHH--hCCCCC-CceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCC
Q 003999 332 DGKKLILGIDDMDIFKGISL-KLLAMEQLLQ--QHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSP 407 (780)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~-~l~A~~~ll~--~~P~~~-~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~ 407 (780)
++..+++.|.|+...||..+ .|..++++++ .+|+.. ..+++|..|....+. .....+-+.+..+++.||..-...
T Consensus 514 pd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~dp~~~ 592 (796)
T 2c4m_A 514 PESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNNDPEVS 592 (796)
T ss_dssp TTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTT
T ss_pred CCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccccccC
Confidence 36789999999999999999 8999998875 566522 246777655443222 333456667888888888643223
Q ss_pred CcccEEEecCCCCHHHHHHHHHhcceeeeccC--CcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc
Q 003999 408 NYEPVVLIDRPVPRFEKSAYYAVAECCIVNAV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (780)
Q Consensus 408 ~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~--rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (780)
+.-.|+|+. .....--..+|.+||+++.||. .|.-|+.-+-||.- |.|-+|..-|+-
T Consensus 593 ~~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N--------------------GaL~iGtLDGan 651 (796)
T 2c4m_A 593 PLLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN--------------------GALTLGTMDGAN 651 (796)
T ss_dssp TTEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT--------------------TCEEEEESSTHH
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc--------------------CCeEEeccCCeE
Confidence 333588776 3455666678999999999999 89999999888874 455667666765
Q ss_pred ccC------CCcEEECC--CCHHHHHH
Q 003999 486 PSL------SGAIRVNP--WDIDAVAD 504 (780)
Q Consensus 486 ~~l------~~al~VnP--~d~~~~A~ 504 (780)
.++ .+++++-. .+++++-.
T Consensus 652 vEi~e~vG~~NgF~FG~~~~ev~~l~~ 678 (796)
T 2c4m_A 652 VEIVDSVGEENAYIFGARVEELPALRE 678 (796)
T ss_dssp HHHHHHHCGGGSEEESCCTTTHHHHHH
T ss_pred eehhhhcCCCcEEEecCchhhHHHHHH
Confidence 443 24788876 66655543
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.89 E-value=5.9e-06 Score=85.68 Aligned_cols=68 Identities=24% Similarity=0.273 Sum_probs=52.5
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcC---CChhhHHHHhccCC----CceEEecCccEE
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG---RGRSSLSEWLAPCE----MLGIAAEHGYFI 662 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~f~~l~----~lgliaenG~~i 662 (780)
+.|+|+||+||||++ .+ .+.++++++|++|.+. |++|+++|| |+...+.+.+..+. .-.+++.||...
T Consensus 7 ~~kli~~DlDGTLl~---~~-~~~~~~~~ai~~l~~~-Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~~~~~~~ 81 (268)
T 3qgm_A 7 DKKGYIIDIDGVIGK---SV-TPIPEGVEGVKKLKEL-GKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVATYATA 81 (268)
T ss_dssp CCSEEEEECBTTTEE---TT-EECHHHHHHHHHHHHT-TCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEEHHHHHH
T ss_pred cCCEEEEcCcCcEEC---CC-EeCcCHHHHHHHHHHc-CCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeCHHHHHH
Confidence 468999999999998 32 3567899999999995 999999999 67777777776542 124677777643
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=2e-05 Score=77.15 Aligned_cols=59 Identities=22% Similarity=0.157 Sum_probs=47.8
Q ss_pred cCceEEeCCCCCCCCCCCC---C----CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSI---I----KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~---~----~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
..|+|+||+||||++.... . ...+++..++|++|++. |++++|+|||+...+...+..+
T Consensus 7 ~ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-G~~~~i~Tg~~~~~~~~~~~~l 72 (180)
T 1k1e_A 7 NIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDA-DIQVAVLSGRDSPILRRRIADL 72 (180)
T ss_dssp GCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHT-TCEEEEEESCCCHHHHHHHHHH
T ss_pred CCeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHC-CCeEEEEeCCCcHHHHHHHHHc
Confidence 4689999999999984210 1 13567889999999985 9999999999999998888765
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.83 E-value=6.7e-06 Score=85.39 Aligned_cols=69 Identities=17% Similarity=0.176 Sum_probs=55.3
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc---CCChhhHHHHhccCC----CceEEecCccEE
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAPCE----MLGIAAEHGYFI 662 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~f~~l~----~lgliaenG~~i 662 (780)
+.|+|+||+||||++ .++.+ ++++++|++|.+. |+.|+++| ||+...+.+.+..+. .-.+++.||+.+
T Consensus 4 ~~kli~~DlDGTLl~---~~~~i-~~~~eal~~l~~~-G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~~~~~ 78 (264)
T 3epr_A 4 AYKGYLIDLDGTIYK---GKSRI-PAGERFIERLQEK-GIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATV 78 (264)
T ss_dssp CCCEEEECCBTTTEE---TTEEC-HHHHHHHHHHHHH-TCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHH
T ss_pred CCCEEEEeCCCceEe---CCEEC-cCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHHHHHH
Confidence 368999999999999 55667 8999999999995 99999999 888888888887642 113667777654
Q ss_pred e
Q 003999 663 R 663 (780)
Q Consensus 663 r 663 (780)
.
T Consensus 79 ~ 79 (264)
T 3epr_A 79 D 79 (264)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.83 E-value=5.9e-06 Score=84.91 Aligned_cols=59 Identities=15% Similarity=0.126 Sum_probs=47.1
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc---CCChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~f~~l 649 (780)
..|+|+||+||||++.....+.+++.+.++++.|.+. |+.++++| ||+...+.+.+..+
T Consensus 11 ~~k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~~-G~~~~~~t~~~gr~~~~~~~~l~~~ 72 (271)
T 2x4d_A 11 GVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRS-RLKVRFCTNESAASRAELVGQLQRL 72 (271)
T ss_dssp TCCEEEECCBTTTEECCTTTCEECTTHHHHHHHHHHS-SSEEEEECCCCSSCHHHHHHHHHHT
T ss_pred cCCEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHHC-CCcEEEEECCCCCCHHHHHHHHHHC
Confidence 4689999999999983100344667888889999884 99999999 99999888877653
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00023 Score=78.12 Aligned_cols=98 Identities=13% Similarity=0.040 Sum_probs=61.7
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEE----cCCCCcccc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVV----SEFIGCSPS 487 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~----Se~~G~~~~ 487 (780)
|.+. +.++ ...++..||++|. .|-+.+..|||+||. |+|+ .+-.+.++.
T Consensus 286 v~~~-~~~~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~G~-------------------P~v~~p~~~~q~~~a~~ 338 (398)
T 4fzr_A 286 VLAA-GQFP---LSAIMPACDVVVH----HGGHGTTLTCLSEGV-------------------PQVSVPVIAEVWDSARL 338 (398)
T ss_dssp EEEE-SCCC---HHHHGGGCSEEEE----CCCHHHHHHHHHTTC-------------------CEEECCCSGGGHHHHHH
T ss_pred EEEe-CcCC---HHHHHhhCCEEEe----cCCHHHHHHHHHhCC-------------------CEEecCCchhHHHHHHH
Confidence 5544 5665 4567778999984 444678899999974 6666 333344444
Q ss_pred C---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHH-HhhHhhhCCHHHHHH
Q 003999 488 L---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEK-HYRYVSTHDVAYWAR 538 (780)
Q Consensus 488 l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~-~~~~V~~~~~~~Wa~ 538 (780)
+ ..|+++++. |.++++++|.++|+++. .+.++.+ ..++.....+...++
T Consensus 339 ~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 339 LHAAGAGVEVPWEQAGVESVLAACARIRDDSS--YVGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp HHHTTSEEECC-------CHHHHHHHHHHCTH--HHHHHHHHHHHHTTSCCHHHHHH
T ss_pred HHHcCCEEecCcccCCHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHcCCCHHHHHH
Confidence 5 237888887 78999999999999874 3344444 455555566555444
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=8.9e-05 Score=78.69 Aligned_cols=79 Identities=16% Similarity=0.174 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc---CCChhhHHHHhccCC---
Q 003999 577 LSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAPCE--- 650 (780)
Q Consensus 577 l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~f~~l~--- 650 (780)
++.+.+..- -.+.|+|+||+||||++.. .+.+.+.++|++|.+. |+.|+++| ||++..+.+.+..+.
T Consensus 9 ~~~~~~~~~--~~~~k~i~~D~DGTL~~~~----~~~~~~~~~l~~l~~~-g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~ 81 (306)
T 2oyc_A 9 LRGAALRDV--LGRAQGVLFDCDGVLWNGE----RAVPGAPELLERLARA-GKAALFVSNNSRRARPELALRFARLGFGG 81 (306)
T ss_dssp CCHHHHHHH--HHHCSEEEECSBTTTEETT----EECTTHHHHHHHHHHT-TCEEEEEECCCSSCHHHHHHHHHHTTCCS
T ss_pred CCHHHHHHH--HhhCCEEEECCCCcEecCC----ccCcCHHHHHHHHHHC-CCeEEEEECCCCCCHHHHHHHHHhcCCCc
Confidence 444444332 2247899999999999732 3556799999999995 99999999 688888877776542
Q ss_pred --CceEEecCccEE
Q 003999 651 --MLGIAAEHGYFI 662 (780)
Q Consensus 651 --~lgliaenG~~i 662 (780)
.-.+++.||+.+
T Consensus 82 ~~~~~i~~~~~~~~ 95 (306)
T 2oyc_A 82 LRAEQLFSSALCAA 95 (306)
T ss_dssp CCGGGEEEHHHHHH
T ss_pred CChhhEEcHHHHHH
Confidence 114666666544
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00019 Score=78.73 Aligned_cols=155 Identities=12% Similarity=0.047 Sum_probs=96.3
Q ss_pred CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 003999 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV 412 (780)
++.+++++|++. .|+......+++.+ ++. +++ ++.++.+. .+.+++ +. + . ..|
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l-~~~-~~~----~~~~~g~~----~~~~~l----~~----~----~----~~v 294 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGL-AGL-DAD----VLVASGPS----LDVSGL----GE----V----P----ANV 294 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHH-HTS-SSE----EEEECCSS----CCCTTC----CC----C----C----TTE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHH-HcC-CCE----EEEEECCC----CChhhh----cc----C----C----CcE
Confidence 456788899996 66666666666655 333 222 34344322 100011 10 0 0 136
Q ss_pred EEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----ccccC
Q 003999 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CSPSL 488 (780)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l 488 (780)
.+. +.++ +..+|+.||++|.+| | ..+.+|||+||. |+|+.-..+ .++.+
T Consensus 295 ~~~-~~~~---~~~~l~~ad~~v~~~---g-~~t~~Ea~a~G~-------------------P~v~~p~~~~q~~~~~~v 347 (412)
T 3otg_A 295 RLE-SWVP---QAALLPHVDLVVHHG---G-SGTTLGALGAGV-------------------PQLSFPWAGDSFANAQAV 347 (412)
T ss_dssp EEE-SCCC---HHHHGGGCSEEEESC---C-HHHHHHHHHHTC-------------------CEEECCCSTTHHHHHHHH
T ss_pred EEe-CCCC---HHHHHhcCcEEEECC---c-hHHHHHHHHhCC-------------------CEEecCCchhHHHHHHHH
Confidence 544 5563 778999999999765 3 268899999974 677744433 44555
Q ss_pred ---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHH
Q 003999 489 ---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (780)
Q Consensus 489 ---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~ 542 (780)
..|++++|. |.++++++|.++|++++ .++...+..+++...+++..-++.+.+
T Consensus 348 ~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (412)
T 3otg_A 348 AQAGAGDHLLPDNISPDSVSGAAKRLLAEES-YRAGARAVAAEIAAMPGPDEVVRLLPG 405 (412)
T ss_dssp HHHTSEEECCGGGCCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHSCCHHHHHTTHHH
T ss_pred HHcCCEEecCcccCCHHHHHHHHHHHHhCHH-HHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 248889887 89999999999999753 344434445666677777666665444
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00035 Score=80.73 Aligned_cols=173 Identities=6% Similarity=-0.104 Sum_probs=105.6
Q ss_pred CeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEE
Q 003999 334 KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVV 413 (780)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~ 413 (780)
..++.+..|+ .|..+..++++.+++++.|+-+ .++.+.+. +.+... .+.+++.+ ..|.. .|+
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~---L~l~~~g~--~~g~~~-~~~~~~~~--~GI~~--------Rv~ 502 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVKV---HFHFALGQ--SNGITH-PYVERFIK--SYLGD--------SAT 502 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEE---EEEEEESS--CCGGGH-HHHHHHHH--HHHGG--------GEE
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcE---EEEEecCC--CchhhH-HHHHHHHH--cCCCc--------cEE
Confidence 4556667775 7999999999999999999732 22222221 122222 22222221 22321 365
Q ss_pred EecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-----
Q 003999 414 LIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL----- 488 (780)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l----- 488 (780)
+.+.++.++..+.|+.||+|+.|+.+.| |++.+|||+||. |+|...-.+.+.-+
T Consensus 503 -F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGV-------------------PVVTl~G~~~asRvgaSlL 561 (631)
T 3q3e_A 503 -AHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGL-------------------VGVCKTGAEVHEHIDEGLF 561 (631)
T ss_dssp -EECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTC-------------------CEEEECCSSHHHHHHHHHH
T ss_pred -EcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCC-------------------CEEeccCCcHHHHhHHHHH
Confidence 4568899999999999999999998877 999999999963 55653222211111
Q ss_pred ---C-CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh---CCHHHHHHHHHHHHHHHHH
Q 003999 489 ---S-GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST---HDVAYWARSFAQDLERACR 549 (780)
Q Consensus 489 ---~-~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~---~~~~~Wa~~~l~~l~~~~~ 549 (780)
+ ...+| ..|.++.++...++.++++ .++...+++++.+.+ ++ .|.+.|-+.++++.+
T Consensus 562 ~~~GLpE~LI-A~d~eeYv~~Av~La~D~~-~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 562 KRLGLPEWLI-ANTVDEYVERAVRLAENHQ-ERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKLN 625 (631)
T ss_dssp HHTTCCGGGE-ESSHHHHHHHHHHHHHCHH-HHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHHH
T ss_pred HhcCCCccee-cCCHHHHHHHHHHHhCCHH-HHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHHH
Confidence 0 12112 2378999999888888765 344444445544322 22 455666555555544
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=9.9e-05 Score=80.65 Aligned_cols=153 Identities=13% Similarity=0.097 Sum_probs=97.7
Q ss_pred CCeEEEEeccccccCCh-HHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 333 GKKLILGIDDMDIFKGI-SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi-~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
.+.+++++|++...|+. ...+.++.+. ++.|+++ +|.++. +.+.+.+ . .. . ..
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~----~v~~~~-----~~~~~~l----~-------~~-~----~~ 271 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE----AVIAVP-----PEHRALL----T-------DL-P----DN 271 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE----EEEECC-----GGGGGGC----T-------TC-C----TT
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE----EEEEEC-----Ccchhhc----c-------cC-C----CC
Confidence 35678889999887666 8888888888 8787765 555542 2221111 1 00 1 13
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCC----CCcccc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF----IGCSPS 487 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~----~G~~~~ 487 (780)
|.+ .+.++..+ ++..||++|. .|-..+..|+|+||. |+|+.-+ .+.+..
T Consensus 272 v~~-~~~~~~~~---ll~~ad~~v~----~~G~~t~~Ea~~~G~-------------------P~v~~p~~~~q~~~a~~ 324 (391)
T 3tsa_A 272 ARI-AESVPLNL---FLRTCELVIC----AGGSGTAFTATRLGI-------------------PQLVLPQYFDQFDYARN 324 (391)
T ss_dssp EEE-CCSCCGGG---TGGGCSEEEE----CCCHHHHHHHHHTTC-------------------CEEECCCSTTHHHHHHH
T ss_pred EEE-eccCCHHH---HHhhCCEEEe----CCCHHHHHHHHHhCC-------------------CEEecCCcccHHHHHHH
Confidence 554 45677655 4499999985 344467899999974 5666322 233333
Q ss_pred C---CCcEEECC----CCHHHHHHHHHHHHcCCHHHHHHHHHH-HhhHhhhCCHHHHHHHH
Q 003999 488 L---SGAIRVNP----WDIDAVADAMTLAINMRDSEKQLRHEK-HYRYVSTHDVAYWARSF 540 (780)
Q Consensus 488 l---~~al~VnP----~d~~~~A~ai~~aL~m~~~er~~r~~~-~~~~V~~~~~~~Wa~~~ 540 (780)
+ ..|++++| .|.++++++|.++|+++. .+.++.+ ..++.....+...++.+
T Consensus 325 ~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i 383 (391)
T 3tsa_A 325 LAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTG--FAAAAIKLSDEITAMPHPAALVRTL 383 (391)
T ss_dssp HHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTH--HHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHcCCEEecCcccccCCHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4 23789998 899999999999999875 3333334 45555556666555543
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.018 Score=62.51 Aligned_cols=83 Identities=12% Similarity=0.053 Sum_probs=54.1
Q ss_pred HHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc--------ccC---CC
Q 003999 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS--------PSL---SG 490 (780)
Q Consensus 422 ~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~--------~~l---~~ 490 (780)
+++..+|+.||++|..| | +.+..|+++||. |.|+.-+.+.. ..+ ..
T Consensus 244 ~dm~~~l~~aDlvI~ra---G-~~Tv~E~~a~G~-------------------P~Ilip~p~~~~~~Q~~NA~~l~~~G~ 300 (365)
T 3s2u_A 244 SDMAAAYAWADLVICRA---G-ALTVSELTAAGL-------------------PAFLVPLPHAIDDHQTRNAEFLVRSGA 300 (365)
T ss_dssp SCHHHHHHHCSEEEECC---C-HHHHHHHHHHTC-------------------CEEECC-----CCHHHHHHHHHHTTTS
T ss_pred hhhhhhhccceEEEecC---C-cchHHHHHHhCC-------------------CeEEeccCCCCCcHHHHHHHHHHHCCC
Confidence 47899999999988543 5 577889999974 55554443322 223 23
Q ss_pred cEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh
Q 003999 491 AIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYV 528 (780)
Q Consensus 491 al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V 528 (780)
|++++.. +.++++++|.++|++|+ .++.+.++.++..
T Consensus 301 a~~l~~~~~~~~~L~~~i~~ll~d~~-~~~~m~~~a~~~~ 339 (365)
T 3s2u_A 301 GRLLPQKSTGAAELAAQLSEVLMHPE-TLRSMADQARSLA 339 (365)
T ss_dssp EEECCTTTCCHHHHHHHHHHHHHCTH-HHHHHHHHHHHTC
T ss_pred EEEeecCCCCHHHHHHHHHHHHCCHH-HHHHHHHHHHhcC
Confidence 7788765 48999999999999874 2333334444433
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00012 Score=71.87 Aligned_cols=60 Identities=23% Similarity=0.049 Sum_probs=48.0
Q ss_pred ccCceEEeCCCCCCCCCC---------------------CCCCCCCHHHHHHHHHhccCCCCEEEEEcCCC-hhhHHHHh
Q 003999 589 TERRAIFLDYDGTVVPET---------------------SIIKSPGPEVISVLKTLCSDPNNTVFIVSGRG-RSSLSEWL 646 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~---------------------~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~-~~~L~~~f 646 (780)
...|+|+||+||||++.. .....+.+.+.++|++|++. |++++|+||++ ...+..++
T Consensus 25 ~~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~-G~~v~ivT~~~~~~~~~~~l 103 (187)
T 2wm8_A 25 RLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSL-GVPGAAASRTSEIEGANQLL 103 (187)
T ss_dssp TSCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHH-TCCEEEEECCSCHHHHHHHH
T ss_pred hccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHC-CceEEEEeCCCChHHHHHHH
Confidence 457899999999999531 01235678899999999985 99999999999 78888888
Q ss_pred ccC
Q 003999 647 APC 649 (780)
Q Consensus 647 ~~l 649 (780)
..+
T Consensus 104 ~~~ 106 (187)
T 2wm8_A 104 ELF 106 (187)
T ss_dssp HHT
T ss_pred HHc
Confidence 754
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=97.37 E-value=7.4e-05 Score=71.25 Aligned_cols=59 Identities=22% Similarity=0.182 Sum_probs=47.7
Q ss_pred cCceEEeCCCCCCCCCCCC-------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSI-------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~-------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
..|+|+||+||||++.... ....++.+.++|+.|++. |.+++|+||++...+...+..+
T Consensus 8 ~~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~l~~~ 73 (162)
T 2p9j_A 8 KLKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQKM-GITLAVISGRDSAPLITRLKEL 73 (162)
T ss_dssp HCCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHTT-TCEEEEEESCCCHHHHHHHHHT
T ss_pred ceeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHHHHC-CCEEEEEeCCCcHHHHHHHHHc
Confidence 4789999999999973210 122457789999999985 9999999999999999888765
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00042 Score=76.73 Aligned_cols=101 Identities=12% Similarity=0.038 Sum_probs=67.2
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----cccc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CSPS 487 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~ 487 (780)
|.+. +.+++. .+|+.||++|..+ |. .+.+|||+||. |+|+.-..| .++.
T Consensus 285 v~~~-~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~G~-------------------P~i~~p~~~~q~~~a~~ 337 (430)
T 2iyf_A 285 VEVH-DWVPQL---AILRQADLFVTHA---GA-GGSQEGLATAT-------------------PMIAVPQAVDQFGNADM 337 (430)
T ss_dssp EEEE-SSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHTTC-------------------CEEECCCSHHHHHHHHH
T ss_pred eEEE-ecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHhCC-------------------CEEECCCccchHHHHHH
Confidence 6544 567765 6899999988754 44 68999999974 777776544 2333
Q ss_pred C---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHH-HhhHhhhCCHHHHHHHHH
Q 003999 488 L---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEK-HYRYVSTHDVAYWARSFA 541 (780)
Q Consensus 488 l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~-~~~~V~~~~~~~Wa~~~l 541 (780)
+ ..|+.+++. |.++++++|.++|+.++ .+.++.+ .++......+...++.+.
T Consensus 338 ~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~ 395 (430)
T 2iyf_A 338 LQGLGVARKLATEEATADLLRETALALVDDPE--VARRLRRIQAEMAQEGGTRRAADLIE 395 (430)
T ss_dssp HHHTTSEEECCCC-CCHHHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 3 247888887 88999999999998643 3334444 344444555555555443
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=9.5e-05 Score=70.63 Aligned_cols=59 Identities=14% Similarity=0.013 Sum_probs=42.3
Q ss_pred cCceEEeCCCCCCCCCCC---CCC----CCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETS---IIK----SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~---~~~----~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.|+|+||+||||++... ... ........+|+.|++. |.+++|+||++...++..+..+
T Consensus 3 ~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~~~~~ 68 (164)
T 3e8m_A 3 EIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAHNK-GIPVGILTGEKTEIVRRRAEKL 68 (164)
T ss_dssp CCCEEEECSTTTTSSSEEEECSSSCEEEEEEGGGHHHHHHHHHT-TCCEEEECSSCCHHHHHHHHHT
T ss_pred cceEEEEcCCCceEcCcEEEcCCCcEEEEecCChHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHc
Confidence 468999999999998321 010 0111122358888884 8999999999999999888765
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=97.18 E-value=9.6e-05 Score=76.97 Aligned_cols=59 Identities=25% Similarity=0.285 Sum_probs=45.1
Q ss_pred ccCceEEeCCCCCCCCCCC----------------------CCCCCCHHHHHHHHHhccCCCCEEEEEcCCC---hhhHH
Q 003999 589 TERRAIFLDYDGTVVPETS----------------------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRG---RSSLS 643 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~----------------------~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~---~~~L~ 643 (780)
.+.++|+||+||||++..+ ....+.+.+.++|+.|.+. |++++|+|||+ +..+.
T Consensus 57 ~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-Gi~i~iaTnr~~~~~~~~~ 135 (258)
T 2i33_A 57 EKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESK-GVDIYYISNRKTNQLDATI 135 (258)
T ss_dssp SSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHT-TCEEEEEEEEEGGGHHHHH
T ss_pred CCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHC-CCEEEEEcCCchhHHHHHH
Confidence 3568999999999998420 0145678999999999995 99999999999 44555
Q ss_pred HHhcc
Q 003999 644 EWLAP 648 (780)
Q Consensus 644 ~~f~~ 648 (780)
+.+..
T Consensus 136 ~~L~~ 140 (258)
T 2i33_A 136 KNLER 140 (258)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00028 Score=68.22 Aligned_cols=48 Identities=21% Similarity=0.263 Sum_probs=39.6
Q ss_pred CceEEeCCCCCCCCCCC------CCCCCCHHHHHHHHHhccCCCCEEEEEcCCCh
Q 003999 591 RRAIFLDYDGTVVPETS------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGR 639 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~------~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~ 639 (780)
.|+||||+||||+.... ....+.+.+.++|++|++. |.+++|+|+++.
T Consensus 1 ~k~v~~D~DGtL~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~-g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQA-DWTVVLATNQSG 54 (179)
T ss_dssp CCEEEECSBTTTBCCCTTCCCSGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECTT
T ss_pred CCEEEEcCCCccccCCCccCCCHHHceECcCHHHHHHHHHHC-CCEEEEEECCCc
Confidence 37999999999997431 1235678999999999995 999999999986
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.15 E-value=8.1e-05 Score=77.13 Aligned_cols=67 Identities=13% Similarity=0.063 Sum_probs=49.3
Q ss_pred ceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc---cC--C--CceEEecCccEEe
Q 003999 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA---PC--E--MLGIAAEHGYFIR 663 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~---~l--~--~lgliaenG~~ir 663 (780)
|+|++|+||||++ ..... +.+.++|++|++. |+.|+++|||+......++. .+ + ...+++.||+.+.
T Consensus 2 k~i~~D~DGtL~~---~~~~~-~~~~~~l~~l~~~-g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~~~~~ 75 (263)
T 1zjj_A 2 VAIIFDMDGVLYR---GNRAI-PGVRELIEFLKER-GIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGLATRL 75 (263)
T ss_dssp EEEEEECBTTTEE---TTEEC-TTHHHHHHHHHHH-TCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHHH
T ss_pred eEEEEeCcCceEe---CCEeC-ccHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHHHHHH
Confidence 6899999999997 33333 6789999999984 99999999999765554443 22 1 1257888887653
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00026 Score=69.95 Aligned_cols=60 Identities=20% Similarity=0.236 Sum_probs=43.3
Q ss_pred ccCceEEeCCCCCCCCCCCCCCCCCHHHHH-------HHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 589 TERRAIFLDYDGTVVPETSIIKSPGPEVIS-------VLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~-------~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.++|+||+||||++.........+++.+ .|+.|++. |.+++|+||++...+...+..+
T Consensus 17 ~~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~-g~~~~ivTn~~~~~~~~~l~~l 83 (191)
T 3n1u_A 17 KKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAA-GIQVAIITTAQNAVVDHRMEQL 83 (191)
T ss_dssp HTCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHHT-TCEEEEECSCCSHHHHHHHHHH
T ss_pred hcCCEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHHC-CCeEEEEeCcChHHHHHHHHHc
Confidence 467899999999999832111111122222 48888884 9999999999999998888764
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0051 Score=66.78 Aligned_cols=137 Identities=9% Similarity=-0.014 Sum_probs=85.3
Q ss_pred CeEEEEecccccc-------CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCC
Q 003999 334 KKLILGIDDMDIF-------KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGS 406 (780)
Q Consensus 334 ~~vil~Vdrld~~-------KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~ 406 (780)
..+++++|++... +.+...++|++++ +++ ++.++. +++.+ ++.. + .
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~----~~~~~g-----~~~~~----~l~~----~----~- 263 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVE----LIVAAP-----DTVAE----ALRA----E----V- 263 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCE----EEEECC-----HHHHH----HHHH----H----C-
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcE----EEEEeC-----CCCHH----hhCC----C----C-
Confidence 5688999999875 5666777776542 333 443331 22221 2221 1 1
Q ss_pred CCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC---
Q 003999 407 PNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG--- 483 (780)
Q Consensus 407 ~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G--- 483 (780)
..|.+ +.++.. .+|..||++|..+ | ..+..|+|+||. |+|+.-+.+
T Consensus 264 ---~~v~~--~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G~-------------------P~v~~p~~~dq~ 312 (384)
T 2p6p_A 264 ---PQARV--GWTPLD---VVAPTCDLLVHHA---G-GVSTLTGLSAGV-------------------PQLLIPKGSVLE 312 (384)
T ss_dssp ---TTSEE--ECCCHH---HHGGGCSEEEECS---C-TTHHHHHHHTTC-------------------CEEECCCSHHHH
T ss_pred ---CceEE--cCCCHH---HHHhhCCEEEeCC---c-HHHHHHHHHhCC-------------------CEEEccCcccch
Confidence 12543 567754 4679999999753 4 457899999974 667665533
Q ss_pred -ccccC---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 484 -CSPSL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 484 -~~~~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
.++.+ ..|+.+++. +.++++++|.++|+.+ +.+.++.+..+.+..
T Consensus 313 ~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 313 APARRVADYGAAIALLPGEDSTEAIADSCQELQAKD--TYARRAQDLSREISG 363 (384)
T ss_dssp HHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHh
Confidence 33333 237888875 7899999999999865 345555555555544
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0012 Score=63.23 Aligned_cols=132 Identities=15% Similarity=0.138 Sum_probs=83.6
Q ss_pred CCeEEEEecccc---ccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 003999 333 GKKLILGIDDMD---IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (780)
Q Consensus 333 ~~~vil~Vdrld---~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~ 409 (780)
...+++++|++. +.|++...++|++++ + ++ ++.++.+.. .+ ..+
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-~~----~~~~~g~~~---~~-----------------~~~---- 67 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-QK----VLWRFDGNK---PD-----------------TLG---- 67 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-SE----EEEECCSSC---CT-----------------TCC----
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-Ce----EEEEECCcC---cc-----------------cCC----
Confidence 467899999984 677777777777532 2 22 333432211 00 011
Q ss_pred ccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----cc
Q 003999 410 EPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CS 485 (780)
Q Consensus 410 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~ 485 (780)
..|.+ .+.++..++.++ ..||++|.. -| +.+..|+|+||. |+|+..+.+ .+
T Consensus 68 ~~v~~-~~~~~~~~~l~~-~~ad~~I~~---~G-~~t~~Ea~~~G~-------------------P~i~~p~~~~Q~~na 122 (170)
T 2o6l_A 68 LNTRL-YKWIPQNDLLGH-PKTRAFITH---GG-ANGIYEAIYHGI-------------------PMVGIPLFADQPDNI 122 (170)
T ss_dssp TTEEE-ESSCCHHHHHTS-TTEEEEEEC---CC-HHHHHHHHHHTC-------------------CEEECCCSTTHHHHH
T ss_pred CcEEE-ecCCCHHHHhcC-CCcCEEEEc---CC-ccHHHHHHHcCC-------------------CEEeccchhhHHHHH
Confidence 13554 467888776654 999999963 34 489999999974 666665532 23
Q ss_pred ccC---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 003999 486 PSL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKH 524 (780)
Q Consensus 486 ~~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~ 524 (780)
..+ ..|+.+++. +.++++++|.++++.+ +.+.++++.
T Consensus 123 ~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~a~~~ 164 (170)
T 2o6l_A 123 AHMKARGAAVRVDFNTMSSTDLLNALKRVINDP--SYKENVMKL 164 (170)
T ss_dssp HHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCH--HHHHHHHHH
T ss_pred HHHHHcCCeEEeccccCCHHHHHHHHHHHHcCH--HHHHHHHHH
Confidence 333 237888876 8899999999999864 334444443
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00033 Score=63.99 Aligned_cols=53 Identities=13% Similarity=0.114 Sum_probs=43.6
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
.|+|++|+||||.. ...+.+.+.++|++|++. |.+++|+|+++...+...+..
T Consensus 2 ~k~i~~D~DgtL~~----~~~~~~~~~~~l~~L~~~-G~~~~i~S~~~~~~~~~~l~~ 54 (137)
T 2pr7_A 2 MRGLIVDYAGVLDG----TDEDQRRWRNLLAAAKKN-GVGTVILSNDPGGLGAAPIRE 54 (137)
T ss_dssp CCEEEECSTTTTSS----CHHHHHHHHHHHHHHHHT-TCEEEEEECSCCGGGGHHHHH
T ss_pred CcEEEEeccceecC----CCccCccHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHH
Confidence 47899999999954 334668899999999985 999999999998887666654
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00065 Score=66.72 Aligned_cols=63 Identities=16% Similarity=0.126 Sum_probs=46.1
Q ss_pred HHhccCceEEeCCCCCCCCCCCC---CC----CCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 586 YRKTERRAIFLDYDGTVVPETSI---IK----SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 586 y~~a~~rlI~lD~DGTL~~~~~~---~~----~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
++..+.|+|+||+||||++.... .. ........+|+.|++. |+.++|+||++...++.++..+
T Consensus 21 ~~~~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~-g~~v~ivT~~~~~~~~~~l~~l 90 (188)
T 2r8e_A 21 AKAENIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTS-DIEVAIITGRKAKLVEDRCATL 90 (188)
T ss_dssp HHHHTCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHHTT-TCEEEEECSSCCHHHHHHHHHH
T ss_pred HHHhcCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHHHC-CCeEEEEeCCChHHHHHHHHHc
Confidence 45567899999999999983210 11 1122333478888884 9999999999999998888754
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00089 Score=66.39 Aligned_cols=58 Identities=14% Similarity=0.081 Sum_probs=45.0
Q ss_pred ccCceEEeCCCCCCCCCCCC----------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc
Q 003999 589 TERRAIFLDYDGTVVPETSI----------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~----------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~ 647 (780)
+..++|+||+||||++.... ...+-+.+.++|+.|++. |.+++|+||+....+.+..+
T Consensus 4 ~~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-g~~~~i~T~~~~~~~~~~~~ 71 (196)
T 2oda_A 4 PTFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQ-GMPCAWIDELPEALSTPLAA 71 (196)
T ss_dssp -CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHHHHH-TCCEEEECCSCHHHHHHHHT
T ss_pred CcCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHHHHC-CCEEEEEcCChHHHHHHhcC
Confidence 35689999999999984311 113457899999999985 89999999999988766554
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00047 Score=69.23 Aligned_cols=53 Identities=11% Similarity=0.183 Sum_probs=43.0
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc---CCChhhHHHHhcc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAP 648 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~f~~ 648 (780)
.|+|+||+||||++ .....++. .++++.|.+. |+.++++| ||+...+.+.+..
T Consensus 3 ~k~i~fDlDGTLl~---~~~~~~~~-~~~~~~l~~~-g~~~~~~t~~~g~~~~~~~~~~~~ 58 (250)
T 2c4n_A 3 IKNVICDIDGVLMH---DNVAVPGA-AEFLHGIMDK-GLPLVLLTNYPSQTGQDLANRFAT 58 (250)
T ss_dssp CCEEEEECBTTTEE---TTEECTTH-HHHHHHHHHT-TCCEEEEESCCSCCHHHHHHHHHH
T ss_pred ccEEEEcCcceEEe---CCEeCcCH-HHHHHHHHHc-CCcEEEEECCCCCCHHHHHHHHHH
Confidence 57999999999998 44445555 8888888884 89999999 9998888777754
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.00086 Score=67.09 Aligned_cols=59 Identities=24% Similarity=0.197 Sum_probs=46.2
Q ss_pred cCceEEeCCCCCCCCCCCC-----CCCCCHHHHHHHHHhccCCCCEEEEEcCCC---------------hhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSI-----IKSPGPEVISVLKTLCSDPNNTVFIVSGRG---------------RSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~-----~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~---------------~~~L~~~f~~l 649 (780)
+.+++++|+||||+..... ...+.+.+.++|++|++. |.+++|+|+++ ...+...+..+
T Consensus 24 ~~k~v~~D~DGTL~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 102 (211)
T 2gmw_A 24 SVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKM-GFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADR 102 (211)
T ss_dssp CBCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEEcCCCCeECCCCcccCcccCcCCcCHHHHHHHHHHC-CCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHc
Confidence 4679999999999974311 135678899999999995 99999999999 46677666543
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0014 Score=66.81 Aligned_cols=54 Identities=24% Similarity=0.268 Sum_probs=40.8
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc---CCChhhHHHHhcc
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAP 648 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~f~~ 648 (780)
..|+|+||+||||++ ..... +++.++++.|.+. |+.++++| ||+...+.+.+..
T Consensus 6 ~ik~i~fDlDGTLld---~~~~~-~~~~~ai~~l~~~-G~~~~~~t~~~~~~~~~~~~~l~~ 62 (259)
T 2ho4_A 6 ALKAVLVDLNGTLHI---EDAAV-PGAQEALKRLRAT-SVMVRFVTNTTKETKKDLLERLKK 62 (259)
T ss_dssp CCCEEEEESSSSSCC------CC-TTHHHHHHHHHTS-SCEEEEEECCSSCCHHHHHHHHHH
T ss_pred hCCEEEEeCcCcEEe---CCEeC-cCHHHHHHHHHHC-CCeEEEEeCCCCcCHHHHHHHHHH
Confidence 468999999999998 33333 5678889999985 99999999 6666666666654
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0009 Score=69.86 Aligned_cols=55 Identities=18% Similarity=0.271 Sum_probs=45.2
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcC---CChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG---RGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~f~~l 649 (780)
+.++|+||+||||++.. .+.+.+.++|++|.+. |+.|+++|| |+...+.+.+..+
T Consensus 13 ~~k~i~~D~DGtL~~~~----~~~~~~~~~l~~l~~~-g~~~~~~Tn~~~r~~~~~~~~l~~l 70 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKTYN----GLLPGIENTFDYLKAQ-GQDYYIVTNDASRSPEQLADSYHKL 70 (284)
T ss_dssp GCSEEEECSBTTTEETT----EECTTHHHHHHHHHHT-TCEEEEEECCCSSCHHHHHHHHHHT
T ss_pred cCCEEEEcCcCCcCcCC----eeChhHHHHHHHHHHC-CCEEEEEeCCCCcCHHHHHHHHHHC
Confidence 57899999999999832 2456789999999985 999999995 8888887777654
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=96.55 E-value=2.6e-05 Score=84.11 Aligned_cols=67 Identities=13% Similarity=0.025 Sum_probs=46.6
Q ss_pred hccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCCh---hhHH---HHh--ccCC-CceEEecC
Q 003999 588 KTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGR---SSLS---EWL--APCE-MLGIAAEH 658 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~---~~L~---~~f--~~l~-~lgliaen 658 (780)
....++|+||+||||++.. . .++|.++... ++.|+++|||+. ..+. .++ ..+. ...+++.|
T Consensus 18 ~~~~kli~fDlDGTLld~~---~------~~~l~~~~~~-g~~~~~~tGR~~~~~~~~~~~~~~~~~~~l~~~~~~i~~n 87 (332)
T 1y8a_A 18 YFQGHMFFTDWEGPWILTD---F------ALELCMAVFN-NARFFSNLSEYDDYLAYEVRREGYEAGYTLKLLTPFLAAA 87 (332)
T ss_dssp --CCCEEEECSBTTTBCCC---H------HHHHHHHHHC-CHHHHHHHHHHHHHHHHTTCCTTCCTTTHHHHHHHHHHHT
T ss_pred CCCceEEEEECcCCCcCcc---H------HHHHHHHHHC-CCEEEEEcCCCchhhhhhhhccCeechhhcCCcCeEEEcC
Confidence 3456899999999999832 1 1677777774 788999999999 5554 444 3221 12477889
Q ss_pred ccEEee
Q 003999 659 GYFIRW 664 (780)
Q Consensus 659 G~~ir~ 664 (780)
|+.+..
T Consensus 88 Ga~i~~ 93 (332)
T 1y8a_A 88 GVKNRD 93 (332)
T ss_dssp TCCHHH
T ss_pred CcEEEE
Confidence 998764
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0016 Score=63.08 Aligned_cols=58 Identities=14% Similarity=0.091 Sum_probs=40.4
Q ss_pred HhccCceEEeCCCCCCCCCCCC---CCC----CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc
Q 003999 587 RKTERRAIFLDYDGTVVPETSI---IKS----PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (780)
Q Consensus 587 ~~a~~rlI~lD~DGTL~~~~~~---~~~----ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~ 647 (780)
+..+.|+|++|+||||++..-. ... .+-.-..+|+.|++. |++++|+||+ ..++..+.
T Consensus 5 ~~~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~~~L~~Lk~~-Gi~~~I~Tg~--~~~~~~l~ 69 (168)
T 3ewi_A 5 KLKEIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDAIGISLLKKS-GIEVRLISER--ACSKQTLS 69 (168)
T ss_dssp --CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHHHHHHHHHHT-TCEEEEECSS--CCCHHHHH
T ss_pred hHhcCcEEEEeCccceECCcEEEcCCCCEEEEEecCcHHHHHHHHHC-CCEEEEEeCc--HHHHHHHH
Confidence 4567899999999999984311 111 112223478899885 9999999999 66777776
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.00065 Score=67.50 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=44.4
Q ss_pred hccCceEEeCCCCCCCCCCCCC-------CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 588 KTERRAIFLDYDGTVVPETSII-------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~~-------~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
..+.|+|+||+||||++..... ......-...|+.|++. |.+++|+||++...+...+..+
T Consensus 22 ~~~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~-G~~~~ivT~~~~~~~~~~l~~l 89 (195)
T 3n07_A 22 AKQIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNA-GIEIAIITGRRSQIVENRMKAL 89 (195)
T ss_dssp HHTCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHHT
T ss_pred HhCCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHC-CCEEEEEECcCHHHHHHHHHHc
Confidence 3567999999999999832111 11112223348888885 9999999999999999888765
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.00066 Score=66.03 Aligned_cols=59 Identities=19% Similarity=0.193 Sum_probs=42.2
Q ss_pred cCceEEeCCCCCCCCCCCCC---CCC----CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSII---KSP----GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~---~~p----s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.|+|+||+||||++..... ... .-.---+|+.|++. |.+++|+||+....++..+..+
T Consensus 11 ~~k~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~~~~l 76 (176)
T 3mmz_A 11 DIDAVVLDFDGTQTDDRVLIDSDGREFVSVHRGDGLGIAALRKS-GLTMLILSTEQNPVVAARARKL 76 (176)
T ss_dssp GCSEEEECCTTTTSCSCCEECTTCCEEEEEEHHHHHHHHHHHHT-TCEEEEEESSCCHHHHHHHHHH
T ss_pred cCCEEEEeCCCCcCcCCEeecCCccHhHhcccccHHHHHHHHHC-CCeEEEEECcChHHHHHHHHHc
Confidence 46899999999999832110 010 11111168888885 9999999999999999888765
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0016 Score=66.89 Aligned_cols=68 Identities=13% Similarity=0.078 Sum_probs=49.7
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc----C--C--CceEEecCccE
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP----C--E--MLGIAAEHGYF 661 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~----l--~--~lgliaenG~~ 661 (780)
+.++|+||+||||++ ..... +.+.++|+.|.+. |..++++|||+......++.. + + .-.+++.+|..
T Consensus 4 ~~k~v~fDlDGTL~~---~~~~~-~~~~~~l~~l~~~-g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 78 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYL---GKEPI-PAGKRFVERLQEK-DLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTATLAT 78 (264)
T ss_dssp SCCEEEECCBTTTEE---TTEEC-HHHHHHHHHHHHT-TCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEHHHHH
T ss_pred cCCEEEEeCCCeEEe---CCEEC-cCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcHHHHH
Confidence 368999999999998 33334 6888999999985 999999999988766655442 2 1 12366666664
Q ss_pred E
Q 003999 662 I 662 (780)
Q Consensus 662 i 662 (780)
+
T Consensus 79 ~ 79 (264)
T 1yv9_A 79 I 79 (264)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0032 Score=61.55 Aligned_cols=58 Identities=10% Similarity=-0.009 Sum_probs=45.6
Q ss_pred CceEEeCCCCCCCCCCC-----------CCCCCCHHHHHHHHHhccCCCCEEEEEcCCCh---hhHHHHhccC
Q 003999 591 RRAIFLDYDGTVVPETS-----------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGR---SSLSEWLAPC 649 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~-----------~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~---~~L~~~f~~l 649 (780)
.++|+||+||||+.... ....+-+.+.++|++|++. |.+++|+|+++. ..+...+..+
T Consensus 3 ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~-g~~~~i~Tn~~~~~~~~~~~~l~~~ 74 (189)
T 3ib6_A 3 LTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQL-GFKQAILSNTATSDTEVIKRVLTNF 74 (189)
T ss_dssp CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHHT
T ss_pred ceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHC-CCEEEEEECCCccchHHHHHHHHhc
Confidence 57999999999976221 1135668999999999995 999999999886 7777777654
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0017 Score=65.04 Aligned_cols=59 Identities=24% Similarity=0.306 Sum_probs=46.9
Q ss_pred cCceEEeCCCCCCCCCCC-----CCCCCCHHHHHHHHHhccCCCCEEEEEcCCCh---------------hhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETS-----IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGR---------------SSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~-----~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~---------------~~L~~~f~~l 649 (780)
..+++++|+||||+.... ....+.+.+.++|++|++. |.+++|+|+++. ..+...+..+
T Consensus 30 ~~k~i~~D~DGtl~~~~~y~~~~~~~~~~~g~~e~L~~L~~~-G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 108 (218)
T 2o2x_A 30 HLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRA-GIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREE 108 (218)
T ss_dssp SCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHH-TCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEEeCCCCcCCCCcccCCcccCeECcCHHHHHHHHHHC-CCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHc
Confidence 468999999999998421 1245778999999999985 999999999998 6677767654
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0016 Score=63.96 Aligned_cols=60 Identities=18% Similarity=0.104 Sum_probs=43.4
Q ss_pred ccCceEEeCCCCCCCCCCCC---CCC----CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 589 TERRAIFLDYDGTVVPETSI---IKS----PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~---~~~----ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.|+|+||+||||++.... ... ....--.+|+.|++. |.+++|+||+....++..+..+
T Consensus 17 ~~ik~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~~~~l 83 (189)
T 3mn1_A 17 KAIKLAVFDVDGVLTDGRLYFMEDGSEIKTFNTLDGQGIKMLIAS-GVTTAIISGRKTAIVERRAKSL 83 (189)
T ss_dssp HTCCEEEECSTTTTSCSEEEEETTSCEEEEEEHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHHH
T ss_pred HhCCEEEEcCCCCcCCccEeeccCCcEeeeeccccHHHHHHHHHC-CCEEEEEECcChHHHHHHHHHc
Confidence 46799999999999984210 000 111112378888885 9999999999999998888765
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0016 Score=65.36 Aligned_cols=63 Identities=19% Similarity=0.281 Sum_probs=44.0
Q ss_pred CHHHHHHHHHhccCceEEeCCCCCCCCCCCC-------------------------------CCCCCHHHHHHHHHhccC
Q 003999 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETSI-------------------------------IKSPGPEVISVLKTLCSD 626 (780)
Q Consensus 578 ~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~-------------------------------~~~ps~~~~~~L~~L~~d 626 (780)
++++|...-...+.++|+||+||||++..+. ...+.+.+.++|+.|++.
T Consensus 24 ~~~~i~~~~~~~~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~ 103 (211)
T 2b82_A 24 SVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRR 103 (211)
T ss_dssp CHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHH
T ss_pred eHhhHhhhcccCCCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHC
Confidence 3555553322234789999999999983210 011346788999999985
Q ss_pred CCCEEEEEcCCChhh
Q 003999 627 PNNTVFIVSGRGRSS 641 (780)
Q Consensus 627 ~g~~V~IvSGR~~~~ 641 (780)
|.+++|+|+++...
T Consensus 104 -G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 104 -GDAIFFVTGRSPTK 117 (211)
T ss_dssp -TCEEEEEECSCCCS
T ss_pred -CCEEEEEcCCcHHH
Confidence 99999999997653
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=95.93 E-value=0.0058 Score=59.72 Aligned_cols=32 Identities=6% Similarity=-0.149 Sum_probs=23.3
Q ss_pred CeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 746 QHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 746 ~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
..+.++.+.+.+|+.+++.+++.+++++.+|.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 168 (219)
T 3kd3_A 137 GSFKELDNSNGACDSKLSAFDKAKGLIDGEVI 168 (219)
T ss_dssp SBEEEEECTTSTTTCHHHHHHHHGGGCCSEEE
T ss_pred CceeccCCCCCCcccHHHHHHHHhCCCCCCEE
Confidence 44556777777888888888888788777664
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.81 E-value=0.0048 Score=59.78 Aligned_cols=49 Identities=22% Similarity=0.384 Sum_probs=38.6
Q ss_pred hccCceEEeCCCCCCCCCCC--------CCCCCCHHHHHHHHHhccCCCCEEEEEcCC
Q 003999 588 KTERRAIFLDYDGTVVPETS--------IIKSPGPEVISVLKTLCSDPNNTVFIVSGR 637 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~--------~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR 637 (780)
-+..|++++|.||||+...+ ....+-+.+.++|+.|++. |.+++|+|+.
T Consensus 11 ~~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-G~~l~i~Tn~ 67 (176)
T 2fpr_A 11 GSSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKA-GYKLVMITNQ 67 (176)
T ss_dssp --CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHT-TEEEEEEEEC
T ss_pred CCcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHHC-CCEEEEEECC
Confidence 35789999999999987421 1235668999999999985 9999999998
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.013 Score=58.36 Aligned_cols=36 Identities=6% Similarity=0.051 Sum_probs=31.2
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.+.|+.|++. |.+++|+||.....++.++..+
T Consensus 94 ~~g~~~~l~~l~~~-g~~~~ivS~~~~~~~~~~~~~~ 129 (232)
T 3fvv_A 94 TVQAVDVVRGHLAA-GDLCALVTATNSFVTAPIARAF 129 (232)
T ss_dssp CHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHc
Confidence 56788899999985 9999999999999988888765
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=95.58 E-value=0.029 Score=60.73 Aligned_cols=101 Identities=14% Similarity=0.081 Sum_probs=64.5
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCC-----CCccc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF-----IGCSP 486 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~-----~G~~~ 486 (780)
|.+ .+.++.. .+++.||++|..+ |. .+..|++++|. |+|+.-. .+.+.
T Consensus 283 v~~-~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G~-------------------P~v~~p~~~~~q~~~a~ 335 (402)
T 3ia7_A 283 VEA-HQWIPFH---SVLAHARACLTHG---TT-GAVLEAFAAGV-------------------PLVLVPHFATEAAPSAE 335 (402)
T ss_dssp EEE-ESCCCHH---HHHTTEEEEEECC---CH-HHHHHHHHTTC-------------------CEEECGGGCGGGHHHHH
T ss_pred EEE-ecCCCHH---HHHhhCCEEEECC---CH-HHHHHHHHhCC-------------------CEEEeCCCcccHHHHHH
Confidence 554 4567765 8899999988765 33 46799999974 5554322 23333
Q ss_pred cC---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHHH
Q 003999 487 SL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFA 541 (780)
Q Consensus 487 ~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~l 541 (780)
.+ ..|+.+++. +.+++++++.++|+++ +.+.++++..+.+ ......+-++.+.
T Consensus 336 ~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~ 394 (402)
T 3ia7_A 336 RVIELGLGSVLRPDQLEPASIREAVERLAADS--AVRERVRRMQRDILSSGGPARAADEVE 394 (402)
T ss_dssp HHHHTTSEEECCGGGCSHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHcCCEEEccCCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHhhCChHHHHHHHHH
Confidence 33 237888876 8999999999999875 3444455544444 3344444444433
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=95.53 E-value=0.048 Score=60.44 Aligned_cols=146 Identities=9% Similarity=-0.017 Sum_probs=84.2
Q ss_pred CeEEEEecccccc-----CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 003999 334 KKLILGIDDMDIF-----KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN 408 (780)
Q Consensus 334 ~~vil~Vdrld~~-----KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~ 408 (780)
..|+++.|++... |++...++|+..+ +++ +|.++.. .+.+++ . ...
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~----~v~~~g~-----~~~~~l----~--------~~~--- 318 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAE----IIATFDA-----QQLEGV----A--------NIP--- 318 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----SSE----EEECCCT-----TTTSSC----S--------SCC---
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCE----EEEEECC-----cchhhh----c--------cCC---
Confidence 4688999998764 8888888887643 232 4433321 111001 0 011
Q ss_pred cccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----c
Q 003999 409 YEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----C 484 (780)
Q Consensus 409 ~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~ 484 (780)
..|. +.+.+++. .+|..||++|. +-| ..+..|+++||. |+|+.-+.+ .
T Consensus 319 -~~v~-~~~~~~~~---~ll~~ad~~V~---~~G-~~t~~Ea~~~G~-------------------P~i~~p~~~dQ~~n 370 (441)
T 2yjn_A 319 -DNVR-TVGFVPMH---ALLPTCAATVH---HGG-PGSWHTAAIHGV-------------------PQVILPDGWDTGVR 370 (441)
T ss_dssp -SSEE-ECCSCCHH---HHGGGCSEEEE---CCC-HHHHHHHHHTTC-------------------CEEECCCSHHHHHH
T ss_pred -CCEE-EecCCCHH---HHHhhCCEEEE---CCC-HHHHHHHHHhCC-------------------CEEEeCCcccHHHH
Confidence 1354 45678764 45799999996 344 457899999974 667665533 2
Q ss_pred cccC---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHH
Q 003999 485 SPSL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWAR 538 (780)
Q Consensus 485 ~~~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~ 538 (780)
++.+ ..|+.+++. +.++++++|.++|+.+ +.+.++.+..+.+ .......-++
T Consensus 371 a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 428 (441)
T 2yjn_A 371 AQRTQEFGAGIALPVPELTPDQLRESVKRVLDDP--AHRAGAARMRDDMLAEPSPAEVVG 428 (441)
T ss_dssp HHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHcCCCHHHHHH
Confidence 3333 247888875 8899999999999865 3444555544444 3344444333
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=95.49 E-value=0.0068 Score=59.03 Aligned_cols=37 Identities=19% Similarity=0.152 Sum_probs=29.8
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+++.+.++|+.|.+. |..++|+|||....+...+..+
T Consensus 77 l~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~~~~~ 113 (211)
T 1l7m_A 77 PTEGAEETIKELKNR-GYVVAVVSGGFDIAVNKIKEKL 113 (211)
T ss_dssp BCTTHHHHHHHHHHT-TEEEEEEEEEEHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHC-CCEEEEEcCCcHHHHHHHHHHc
Confidence 456788899999984 9999999999988877666543
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=95.38 E-value=0.0071 Score=59.14 Aligned_cols=36 Identities=17% Similarity=0.192 Sum_probs=26.9
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~ 647 (780)
+-+.+.++|+.|++.+|.+++|+|+++...+..++.
T Consensus 74 ~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~ 109 (193)
T 2i7d_A 74 PIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGE 109 (193)
T ss_dssp BCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHH
T ss_pred cCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHH
Confidence 447888999999873278999999998766554443
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.053 Score=59.21 Aligned_cols=100 Identities=19% Similarity=0.069 Sum_probs=63.3
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCC----Ccccc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFI----GCSPS 487 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~----G~~~~ 487 (780)
|.+. +.++.. .++..||++|..+ |. .+..|++++|. |+|+--+. ..+..
T Consensus 299 v~~~-~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G~-------------------P~v~~p~~~~q~~~a~~ 351 (415)
T 3rsc_A 299 VEAH-RWVPHV---KVLEQATVCVTHG---GM-GTLMEALYWGR-------------------PLVVVPQSFDVQPMARR 351 (415)
T ss_dssp EEEE-SCCCHH---HHHHHEEEEEESC---CH-HHHHHHHHTTC-------------------CEEECCCSGGGHHHHHH
T ss_pred EEEE-ecCCHH---HHHhhCCEEEECC---cH-HHHHHHHHhCC-------------------CEEEeCCcchHHHHHHH
Confidence 5544 567765 7888999988764 43 46789999974 55552222 22333
Q ss_pred C---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHh-hhCCHHHHHHHH
Q 003999 488 L---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSF 540 (780)
Q Consensus 488 l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V-~~~~~~~Wa~~~ 540 (780)
+ ..|+.+++. +.++++++|.++|+++ +.+.++++..+.+ ......+.++.+
T Consensus 352 l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i 408 (415)
T 3rsc_A 352 VDQLGLGAVLPGEKADGDTLLAAVGAVAADP--ALLARVEAMRGHVRRAGGAARAADAV 408 (415)
T ss_dssp HHHHTCEEECCGGGCCHHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHcCCEEEcccCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 3 237788775 8999999999999875 3444555544444 334444444433
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=95.23 E-value=0.015 Score=58.35 Aligned_cols=60 Identities=18% Similarity=0.164 Sum_probs=43.0
Q ss_pred ccCceEEeCCCCCCCCCCCC---C----CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 589 TERRAIFLDYDGTVVPETSI---I----KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~---~----~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.|+|+||+||||++.... . ......---+|+.|++. |.+++|+||+....++..+..+
T Consensus 47 ~~ik~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~d~~~L~~L~~~-G~~l~I~T~~~~~~~~~~l~~l 113 (211)
T 3ij5_A 47 ANIRLLICDVDGVMSDGLIYMGNQGEELKAFNVRDGYGIRCLITS-DIDVAIITGRRAKLLEDRANTL 113 (211)
T ss_dssp TTCSEEEECCTTTTSSSEEEEETTSCEEEEEEHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHHH
T ss_pred hCCCEEEEeCCCCEECCHHHHhhhhHHHHHhccchHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHc
Confidence 45799999999999984210 0 00111111278888885 9999999999999998888765
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.16 E-value=0.0065 Score=62.93 Aligned_cols=59 Identities=17% Similarity=0.320 Sum_probs=44.1
Q ss_pred cCceEEeCCCCCCCCCCCC-----------------------CCCCCHHHHHHHHHhccCCCCEEEEEcCCCh----hhH
Q 003999 590 ERRAIFLDYDGTVVPETSI-----------------------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGR----SSL 642 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~-----------------------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~----~~L 642 (780)
++.+|+||+||||++..+. ...+-+.++++|+.|.+. |+.|+|+|||+. ...
T Consensus 57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~-G~~i~ivTgR~~~~~r~~T 135 (260)
T 3pct_A 57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNAN-GGTMFFVSNRRDDVEKAGT 135 (260)
T ss_dssp -CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHT-TCEEEEEEEEETTTSHHHH
T ss_pred CCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHC-CCeEEEEeCCCccccHHHH
Confidence 3459999999999985311 123446889999999995 999999999975 466
Q ss_pred HHHhccC
Q 003999 643 SEWLAPC 649 (780)
Q Consensus 643 ~~~f~~l 649 (780)
..++..+
T Consensus 136 ~~~L~~l 142 (260)
T 3pct_A 136 VDDMKRL 142 (260)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 6777653
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=95.12 E-value=0.0099 Score=59.66 Aligned_cols=35 Identities=26% Similarity=0.274 Sum_probs=29.0
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|++. |..++|+|+.+...+...+..+
T Consensus 108 ~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~ 142 (240)
T 2no4_A 108 PDAAETLEKLKSA-GYIVAILSNGNDEMLQAALKAS 142 (240)
T ss_dssp TTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHhc
Confidence 5567888999885 8999999999998888877654
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=94.94 E-value=0.0075 Score=62.51 Aligned_cols=60 Identities=18% Similarity=0.261 Sum_probs=44.9
Q ss_pred ccCceEEeCCCCCCCCCCCC-----------------------CCCCCHHHHHHHHHhccCCCCEEEEEcCCCh----hh
Q 003999 589 TERRAIFLDYDGTVVPETSI-----------------------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGR----SS 641 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~-----------------------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~----~~ 641 (780)
.++.+|+||+||||++..+. ...+-+.+.++|+.|.+. |+.|+|+|||+. ..
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~-G~ki~ivTgR~~~~~r~~ 134 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSH-NGKVFYVTNRKDSTEKSG 134 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHT-TEEEEEEEEEETTTTHHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHC-CCeEEEEeCCCccchHHH
Confidence 45679999999999985310 112345788899999995 999999999975 46
Q ss_pred HHHHhccC
Q 003999 642 LSEWLAPC 649 (780)
Q Consensus 642 L~~~f~~l 649 (780)
...++..+
T Consensus 135 T~~~L~~l 142 (262)
T 3ocu_A 135 TIDDMKRL 142 (262)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 66777653
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=94.82 E-value=0.094 Score=57.05 Aligned_cols=148 Identities=9% Similarity=0.014 Sum_probs=83.7
Q ss_pred CCeEEEEecccccc-CChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 333 GKKLILGIDDMDIF-KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 333 ~~~vil~Vdrld~~-KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
.+.+++++|++... |+......+++.+.+ . +++ +|.++.+. +.+. +.. .. ..
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~-~-~~~----~v~~~g~~-----~~~~----l~~--------~~----~~ 284 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGE-V-DAD----FVLALGDL-----DISP----LGT--------LP----RN 284 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHT-S-SSE----EEEECTTS-----CCGG----GCS--------CC----TT
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHc-C-CCE----EEEEECCc-----Chhh----hcc--------CC----Cc
Confidence 45788889999655 355555455554432 2 333 55454322 1001 110 01 13
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEE----cCCCCcc--
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVV----SEFIGCS-- 485 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~----Se~~G~~-- 485 (780)
|.+. +.++. ..++..||++|. .|-..+..|+++||. |+|+ .+-.+.+
T Consensus 285 v~~~-~~~~~---~~ll~~ad~~v~----~~G~~t~~Eal~~G~-------------------P~v~~p~~~dq~~~a~~ 337 (398)
T 3oti_A 285 VRAV-GWTPL---HTLLRTCTAVVH----HGGGGTVMTAIDAGI-------------------PQLLAPDPRDQFQHTAR 337 (398)
T ss_dssp EEEE-SSCCH---HHHHTTCSEEEE----CCCHHHHHHHHHHTC-------------------CEEECCCTTCCSSCTTH
T ss_pred EEEE-ccCCH---HHHHhhCCEEEE----CCCHHHHHHHHHhCC-------------------CEEEcCCCchhHHHHHH
Confidence 5544 56664 456778999984 344457899999974 5666 4555666
Q ss_pred ccC---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHH-HhhHhhhCCHHHHHHHH
Q 003999 486 PSL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEK-HYRYVSTHDVAYWARSF 540 (780)
Q Consensus 486 ~~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~-~~~~V~~~~~~~Wa~~~ 540 (780)
+.+ ..|+.+++. +.++++ ++|+++ +.+.++++ ..+......+...++.+
T Consensus 338 ~~~~~~g~g~~~~~~~~~~~~l~----~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l 392 (398)
T 3oti_A 338 EAVSRRGIGLVSTSDKVDADLLR----RLIGDE--SLRTAAREVREEMVALPTPAETVRRI 392 (398)
T ss_dssp HHHHHHTSEEECCGGGCCHHHHH----HHHHCH--HHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHCCCEEeeCCCCCCHHHHH----HHHcCH--HHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 666 247888876 455555 777764 34444444 44555556666555543
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=94.44 E-value=0.016 Score=56.53 Aligned_cols=36 Identities=14% Similarity=0.217 Sum_probs=29.9
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.++|+.|.+. |..++|+|+.....+...+..+
T Consensus 72 ~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~ 107 (205)
T 3m9l_A 72 APGAVELVRELAGR-GYRLGILTRNARELAHVTLEAI 107 (205)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHT
T ss_pred CccHHHHHHHHHhc-CCeEEEEeCCchHHHHHHHHHc
Confidence 34677889999984 8999999999999888887654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=94.28 E-value=0.037 Score=54.52 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=28.8
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
.+.+.++|+.|++. |.+++|+|+.+...+...+..
T Consensus 98 ~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~ 132 (230)
T 3um9_A 98 FADVPQALQQLRAA-GLKTAILSNGSRHSIRQVVGN 132 (230)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhC-CCeEEEEeCCCHHHHHHHHHH
Confidence 45677889999884 899999999999888777764
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=94.19 E-value=0.017 Score=57.19 Aligned_cols=55 Identities=18% Similarity=0.257 Sum_probs=36.6
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHh-ccCCCCEEEEEcCCChhh-HHHHhcc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTL-CSDPNNTVFIVSGRGRSS-LSEWLAP 648 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L-~~d~g~~V~IvSGR~~~~-L~~~f~~ 648 (780)
.|+|+||+||||++ ......+.+.++++++ -......+...+||+... +..++..
T Consensus 4 ~k~iifDlDGTL~d---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~ 60 (234)
T 2hcf_A 4 RTLVLFDIDGTLLK---VESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSN 60 (234)
T ss_dssp CEEEEECCBTTTEE---ECTHHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHT
T ss_pred ceEEEEcCCCCccc---CccchHHHHHHHHHHHhCCCCccchhhhcCCChHHHHHHHHHH
Confidence 57999999999998 4444556677778774 322223566789999877 6666654
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=94.17 E-value=0.026 Score=62.67 Aligned_cols=48 Identities=21% Similarity=0.299 Sum_probs=38.1
Q ss_pred cCceEEeCCCCCCCCCCCC--------C-CCCCHHHHHHHHHhccCCCCEEEEEcCCC
Q 003999 590 ERRAIFLDYDGTVVPETSI--------I-KSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~--------~-~~ps~~~~~~L~~L~~d~g~~V~IvSGR~ 638 (780)
+.++++||+||||+...+. + ..+-+.+.++|+.|++. |.+++|+|+++
T Consensus 57 ~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-G~~l~IvTN~~ 113 (416)
T 3zvl_A 57 QGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAE-GYKLVIFTNQM 113 (416)
T ss_dssp CSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHT-TCEEEEEEECH
T ss_pred CCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHC-CCeEEEEeCCc
Confidence 5789999999999863210 1 12568899999999995 99999999966
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=94.13 E-value=0.075 Score=54.71 Aligned_cols=36 Identities=11% Similarity=0.173 Sum_probs=30.1
Q ss_pred CCHHHHHHHHHhccCCCC--EEEEEcCCChhhHHHHhcc
Q 003999 612 PGPEVISVLKTLCSDPNN--TVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~--~V~IvSGR~~~~L~~~f~~ 648 (780)
+.+.+.++|+.|.+. |. +++|+|+.....+...+..
T Consensus 143 ~~p~~~~~L~~L~~~-g~~~~l~i~Tn~~~~~~~~~l~~ 180 (282)
T 3nuq_A 143 PDIPLRNMLLRLRQS-GKIDKLWLFTNAYKNHAIRCLRL 180 (282)
T ss_dssp CCHHHHHHHHHHHHS-SSCSEEEEECSSCHHHHHHHHHH
T ss_pred cChhHHHHHHHHHhC-CCCceEEEEECCChHHHHHHHHh
Confidence 457788999999985 89 9999999998888777654
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=94.01 E-value=0.037 Score=58.97 Aligned_cols=37 Identities=16% Similarity=0.158 Sum_probs=31.3
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.++|+.|++. |.+++|+||.....++.++..+
T Consensus 180 l~pg~~e~L~~Lk~~-G~~v~IvSn~~~~~~~~~l~~l 216 (317)
T 4eze_A 180 LSPGLLTILPVIKAK-GFKTAIISGGLDIFTQRLKARY 216 (317)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHH
T ss_pred ECcCHHHHHHHHHhC-CCEEEEEeCccHHHHHHHHHHc
Confidence 456788999999995 9999999999998888877654
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=93.94 E-value=0.03 Score=60.65 Aligned_cols=53 Identities=17% Similarity=0.289 Sum_probs=40.0
Q ss_pred ccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCC---ChhhHHHHh
Q 003999 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGR---GRSSLSEWL 646 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR---~~~~L~~~f 646 (780)
++.+.++||+||||+.. . .+-+.+.++|+.|++. |.+++++|++ +.....+.+
T Consensus 11 ~~~~~~l~D~DGvl~~g---~-~~~p~a~~~l~~l~~~-g~~~~~vTNn~~~~~~~~~~~l 66 (352)
T 3kc2_A 11 SKKIAFAFDIDGVLFRG---K-KPIAGASDALKLLNRN-KIPYILLTNGGGFSERARTEFI 66 (352)
T ss_dssp -CCEEEEECCBTTTEET---T-EECTTHHHHHHHHHHT-TCCEEEECSCCSSCHHHHHHHH
T ss_pred ccCCEEEEECCCeeEcC---C-eeCcCHHHHHHHHHHC-CCEEEEEeCCCCCCchHHHHHH
Confidence 36899999999999973 2 3446788899999985 9999999965 455544444
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=93.92 E-value=0.046 Score=55.89 Aligned_cols=37 Identities=14% Similarity=0.070 Sum_probs=31.0
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.++|+.|.+. |++++|+||+....+...+..+
T Consensus 145 ~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~~~~~ 181 (280)
T 3skx_A 145 IRPESREAISKLKAI-GIKCMMLTGDNRFVAKWVAEEL 181 (280)
T ss_dssp ECTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHH
T ss_pred CCHhHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHc
Confidence 346688899999985 8999999999999988877654
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=93.78 E-value=0.03 Score=54.78 Aligned_cols=37 Identities=14% Similarity=0.044 Sum_probs=30.2
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.++|+.|++. |.+++|+|+.....+..++..+
T Consensus 76 ~~~~~~~~l~~l~~~-g~~~~i~S~~~~~~~~~~l~~~ 112 (217)
T 3m1y_A 76 LFEGALELVSALKEK-NYKVVCFSGGFDLATNHYRDLL 112 (217)
T ss_dssp BCBTHHHHHHHHHTT-TEEEEEEEEEEHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHC-CCEEEEEcCCchhHHHHHHHHc
Confidence 345688999999985 8999999999988887777653
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=93.56 E-value=0.024 Score=56.24 Aligned_cols=35 Identities=20% Similarity=0.201 Sum_probs=28.8
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|++. |.+++|+|+.+...+..++..+
T Consensus 98 ~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~ 132 (232)
T 1zrn_A 98 SEVPDSLRELKRR-GLKLAILSNGSPQSIDAVVSHA 132 (232)
T ss_dssp TTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHhc
Confidence 4567788888884 8999999999998888877654
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=93.32 E-value=0.022 Score=57.57 Aligned_cols=51 Identities=12% Similarity=-0.037 Sum_probs=34.3
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEE--EE-------------EcCCChhhHHHH
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTV--FI-------------VSGRGRSSLSEW 645 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V--~I-------------vSGR~~~~L~~~ 645 (780)
.|+|+||+||||++ ......+.+.++++.+.+. |..+ .+ .+||+...+.+.
T Consensus 13 ~k~iifDlDGTL~d---~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 78 (251)
T 2pke_A 13 IQLVGFDGDDTLWK---SEDYYRTAEADFEAILSGY-LDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLS 78 (251)
T ss_dssp CCEEEECCBTTTBC---CHHHHHHHHHHHHHHHTTT-CCC-----CTTHHHHHHHHHHHHCSSHHHHHHH
T ss_pred eeEEEEeCCCCCcc---CcHhHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHhhhhhhccCcchHHHHH
Confidence 57999999999998 3334456677788877774 7766 23 468876654443
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=93.18 E-value=0.038 Score=54.71 Aligned_cols=49 Identities=12% Similarity=0.132 Sum_probs=38.1
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHH-HHHHHHhccCCCCEEEEEcCCChhhH
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEV-ISVLKTLCSDPNNTVFIVSGRGRSSL 642 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~-~~~L~~L~~d~g~~V~IvSGR~~~~L 642 (780)
+.|+|+||+||||++ ......+.+ .++++++... ...+...+|++....
T Consensus 24 ~~k~i~fDlDGTL~d---~~~~~~~~~~~~~~~~~g~~-~~~~~~~~g~~~~~~ 73 (231)
T 3kzx_A 24 QPTAVIFDWYNTLID---TSINIDRTTFYQVLDQMGYK-NIDLDSIPNSTIPKY 73 (231)
T ss_dssp CCSEEEECTBTTTEE---TTSSCCHHHHHHHHHHTTCC-CCCCTTSCTTTHHHH
T ss_pred CCCEEEECCCCCCcC---CchhHHHHHHHHHHHHcCCC-HHHHHHHhCccHHHH
Confidence 468999999999998 556678888 8999988764 566667778775543
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=93.01 E-value=0.053 Score=53.60 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=28.4
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|.+. |.+++|+|+.+...+...+..+
T Consensus 102 ~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~ 136 (233)
T 3umb_A 102 PENVPVLRQLREM-GLPLGILSNGNPQMLEIAVKSA 136 (233)
T ss_dssp TTHHHHHHHHHTT-TCCEEEEESSCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhC-CCcEEEEeCCCHHHHHHHHHHC
Confidence 4566778888884 8999999999998888877654
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=92.81 E-value=0.029 Score=54.47 Aligned_cols=30 Identities=27% Similarity=0.483 Sum_probs=21.4
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHH
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLS 643 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~ 643 (780)
.+.+.++|+.|++. |.+++|+|+.+...+.
T Consensus 93 ~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~ 122 (206)
T 2b0c_A 93 RPEVIAIMHKLREQ-GHRVVVLSNTNRLHTT 122 (206)
T ss_dssp CHHHHHHHHHHHHT-TCEEEEEECCCCCTTS
T ss_pred CccHHHHHHHHHHC-CCeEEEEECCChHHHH
Confidence 45677778888774 7888888887665543
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=92.75 E-value=0.047 Score=54.07 Aligned_cols=36 Identities=25% Similarity=0.324 Sum_probs=30.1
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.++|+.|++. |.+++|+||.....++.++..+
T Consensus 88 ~~g~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~l~~~ 123 (225)
T 1nnl_A 88 TPGIRELVSRLQER-NVQVFLISGGFRSIVEHVASKL 123 (225)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHC-CCcEEEEeCChHHHHHHHHHHc
Confidence 35677889999885 9999999999999888888754
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=92.72 E-value=0.074 Score=53.76 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=25.8
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|+ |.+++|+|+.+...+...+..+
T Consensus 96 ~~~~~~l~~l~---g~~~~i~t~~~~~~~~~~l~~~ 128 (253)
T 1qq5_A 96 PDAAQCLAELA---PLKRAILSNGAPDMLQALVANA 128 (253)
T ss_dssp TTHHHHHHHHT---TSEEEEEESSCHHHHHHHHHHT
T ss_pred ccHHHHHHHHc---CCCEEEEeCcCHHHHHHHHHHC
Confidence 45667777776 7899999999998888777654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=92.65 E-value=0.098 Score=53.03 Aligned_cols=34 Identities=21% Similarity=0.166 Sum_probs=26.2
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
+.+.++|+.|.+. |.+++|+|+.+...+...+..
T Consensus 114 ~~~~~~l~~l~~~-g~~~~i~tn~~~~~~~~~l~~ 147 (277)
T 3iru_A 114 PGWKEVFDKLIAQ-GIKVGGNTGYGPGMMAPALIA 147 (277)
T ss_dssp TTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHc-CCeEEEEeCCchHHHHHHHHh
Confidence 3455678888884 899999999998877776653
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=92.19 E-value=0.72 Score=50.34 Aligned_cols=137 Identities=11% Similarity=0.030 Sum_probs=80.9
Q ss_pred CCeEEEEeccc-cccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 003999 333 GKKLILGIDDM-DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (780)
Q Consensus 333 ~~~vil~Vdrl-d~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~p 411 (780)
...++++.|++ +..|.+...++|++++ + .+ ++.+..+. ..+ . ..+ . ..
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~~----~v~~~g~~---~~~----------~-~~~----~----~~ 286 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-RR----VILSRGWA---DLV----------L-PDD----G----AD 286 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-CC----EEECTTCT---TCC----------C-SSC----G----GG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-Ce----EEEEeCCC---ccc----------c-cCC----C----CC
Confidence 35788999999 6777777778887653 2 22 33232111 000 0 000 0 12
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----cccc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CSPS 487 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~ 487 (780)
|. +.+.+++.+ ++..||++|.. -|. .+..|++++|. |+|+--+.+ -+..
T Consensus 287 v~-~~~~~~~~~---~l~~~d~~v~~---~G~-~t~~Ea~~~G~-------------------P~i~~p~~~dQ~~na~~ 339 (415)
T 1iir_A 287 CF-AIGEVNHQV---LFGRVAAVIHH---GGA-GTTHVAARAGA-------------------PQILLPQMADQPYYAGR 339 (415)
T ss_dssp EE-ECSSCCHHH---HGGGSSEEEEC---CCH-HHHHHHHHHTC-------------------CEEECCCSTTHHHHHHH
T ss_pred EE-EeCcCChHH---HHhhCCEEEeC---CCh-hHHHHHHHcCC-------------------CEEECCCCCccHHHHHH
Confidence 54 456788765 46999999964 454 67899999974 556544433 2222
Q ss_pred C---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 488 L---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 488 l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
+ ..|+.+++. +.++++++|.++ +.+ +.++++++..+.+..
T Consensus 340 l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~--~~~~~~~~~~~~~~~ 384 (415)
T 1iir_A 340 VAELGVGVAHDGPIPTFDSLSAALATA-LTP--ETHARATAVAGTIRT 384 (415)
T ss_dssp HHHHTSEEECSSSSCCHHHHHHHHHHH-TSH--HHHHHHHHHHHHSCS
T ss_pred HHHCCCcccCCcCCCCHHHHHHHHHHH-cCH--HHHHHHHHHHHHHhh
Confidence 3 237778764 789999999999 653 344455554444433
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=92.18 E-value=0.01 Score=58.82 Aligned_cols=53 Identities=11% Similarity=-0.024 Sum_probs=39.1
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~ 647 (780)
.|+|+||+||||++ .....++....+++.+... +..+..+|||....+...+.
T Consensus 2 ik~i~fDlDGTL~~---~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 54 (230)
T 3vay_A 2 IKLVTFDLDDTLWD---TAPAIVGAEAALRDWLAEQ-APKLGPVPVEHLWEIRSRLL 54 (230)
T ss_dssp CCEEEECCBTTTBC---SHHHHHHHHHHHHHHHHHH-CTTTCSCCHHHHHHHHHHHH
T ss_pred eeEEEecCcccCcC---CchHHHHHHHHHHHHHHHh-cCcchhhHHHHHHHHHHHHH
Confidence 57999999999998 3333455666777777774 66677788888887776553
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=91.97 E-value=0.037 Score=53.79 Aligned_cols=33 Identities=15% Similarity=0.201 Sum_probs=25.0
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+ |+.|++ . .+++|+|+.+...+...+..+
T Consensus 77 ~~~~~-l~~l~~-~-~~~~i~t~~~~~~~~~~l~~~ 109 (201)
T 2w43_A 77 EDTKY-LKEISE-I-AEVYALSNGSINEVKQHLERN 109 (201)
T ss_dssp GGGGG-HHHHHH-H-SEEEEEESSCHHHHHHHHHHT
T ss_pred CChHH-HHHHHh-C-CeEEEEeCcCHHHHHHHHHHC
Confidence 34455 777776 4 899999999988888877654
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=91.59 E-value=0.14 Score=50.21 Aligned_cols=36 Identities=17% Similarity=0.136 Sum_probs=29.1
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.++|+.|++. |.+++|+|+.+...+...+..+
T Consensus 86 ~pg~~~~l~~L~~~-g~~~~i~tn~~~~~~~~~l~~~ 121 (216)
T 3kbb_A 86 NPGVREALEFVKSK-RIKLALATSTPQREALERLRRL 121 (216)
T ss_dssp CTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHc-CCCcccccCCcHHHHHHHHHhc
Confidence 34567888999884 9999999999998887776654
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=91.47 E-value=0.93 Score=49.45 Aligned_cols=101 Identities=13% Similarity=0.032 Sum_probs=64.0
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----cccc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CSPS 487 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~ 487 (780)
|.+. +.+++. .+|+.||++|.. -|. .+..|++++|. |+|+.-+.+ .+..
T Consensus 307 v~~~-~~~~~~---~~l~~~d~~v~~---~G~-~t~~Ea~~~G~-------------------P~i~~p~~~dQ~~na~~ 359 (424)
T 2iya_A 307 VEVH-QWVPQL---DILTKASAFITH---AGM-GSTMEALSNAV-------------------PMVAVPQIAEQTMNAER 359 (424)
T ss_dssp EEEE-SSCCHH---HHHTTCSEEEEC---CCH-HHHHHHHHTTC-------------------CEEECCCSHHHHHHHHH
T ss_pred eEEe-cCCCHH---HHHhhCCEEEEC---Cch-hHHHHHHHcCC-------------------CEEEecCccchHHHHHH
Confidence 5544 567765 689999988753 343 67899999974 566654432 1222
Q ss_pred C---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHH
Q 003999 488 L---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (780)
Q Consensus 488 l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l 541 (780)
+ ..|+.+++. +.++++++|.++|+.+ +.+.++++..+.+...+...-+...+
T Consensus 360 l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i 416 (424)
T 2iya_A 360 IVELGLGRHIPRDQVTAEKLREAVLAVASDP--GVAERLAAVRQEIREAGGARAAADIL 416 (424)
T ss_dssp HHHTTSEEECCGGGCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHCCCEEEcCcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 2 236777765 8899999999999865 34555666555555444333333333
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=91.14 E-value=0.017 Score=56.61 Aligned_cols=48 Identities=13% Similarity=0.140 Sum_probs=31.0
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccC--CCCEEEEEcCCChhh
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSD--PNNTVFIVSGRGRSS 641 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d--~g~~V~IvSGR~~~~ 641 (780)
.|+|+||+||||++ .....++.+.++++++... .+..+...+||+...
T Consensus 2 ~k~i~fDlDGTL~d---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~ 51 (221)
T 2wf7_A 2 FKAVLFDLDGVITD---TAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSRED 51 (221)
T ss_dssp CCEEEECCBTTTBT---HHHHHHHHHHHHHHHTTCCCCSHHHHTTTTTCCHHH
T ss_pred CcEEEECCCCcccC---ChHHHHHHHHHHHHHcCCCCCCHHHHHHhCCCCHHH
Confidence 47999999999998 4444556677778776432 012233457777554
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=90.52 E-value=0.12 Score=57.02 Aligned_cols=37 Identities=22% Similarity=0.108 Sum_probs=30.8
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.++|+.|++. |.+++|+||.....++..+..+
T Consensus 257 ~~pg~~e~l~~Lk~~-G~~~~ivS~~~~~~~~~~~~~l 293 (415)
T 3p96_A 257 LMPGARTTLRTLRRL-GYACGVVSGGFRRIIEPLAEEL 293 (415)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHT
T ss_pred cCccHHHHHHHHHHC-CCEEEEEcCCcHHHHHHHHHHc
Confidence 345678899999985 9999999999998888877765
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=90.42 E-value=0.03 Score=54.68 Aligned_cols=25 Identities=0% Similarity=-0.295 Sum_probs=21.0
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+.+..|+.+++.+++++|+++.+|.
T Consensus 142 ~~~k~~~~~~~~~~~~~~~~~~~~i 166 (225)
T 3d6j_A 142 THHKPDPEGLLLAIDRLKACPEEVL 166 (225)
T ss_dssp SSCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCChHHHHHHHHHhCCChHHeE
Confidence 4566778999999999999998764
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=90.32 E-value=0.32 Score=48.12 Aligned_cols=33 Identities=12% Similarity=0.035 Sum_probs=26.3
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHh
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL 646 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f 646 (780)
+.+.+.++|+.|++ . .+++|+|+.+...+....
T Consensus 113 ~~~~~~~~l~~l~~-~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 113 IPTYKLDLLLKLRE-K-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCHHHHHHHHHHTT-T-SEEEEEECCCHHHHHHHH
T ss_pred ccHHHHHHHHHHHh-c-CcEEEEECCChHHHHHHH
Confidence 34778889999987 3 899999999988876433
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=90.24 E-value=0.18 Score=52.42 Aligned_cols=70 Identities=10% Similarity=0.119 Sum_probs=55.3
Q ss_pred HHHHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 579 IDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 579 ~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.....|.....++|++|+|+++...-.....+.+.+.++|+.|++. |++++|+||++...+...+..+
T Consensus 131 ~~~~~~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~l~~~ 200 (287)
T 3a1c_A 131 VELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRM-GIKVGMITGDNWRSAEAISREL 200 (287)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHh
Confidence 345566777777899999999998753212345678899999999985 9999999999999888887654
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=90.18 E-value=1.3 Score=52.37 Aligned_cols=175 Identities=11% Similarity=0.116 Sum_probs=106.1
Q ss_pred CCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 003999 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (780)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV 412 (780)
|..++.+..++ .|=-+..+..+.++|++.|+-+ |++...+. ... ..+.+.+++ +|-. -..|
T Consensus 522 ~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~----L~Ll~~~~----~~~----~~l~~~~~~----~gi~-~~r~ 582 (723)
T 4gyw_A 522 DAIVYCNFNQL--YKIDPSTLQMWANILKRVPNSV----LWLLRFPA----VGE----PNIQQYAQN----MGLP-QNRI 582 (723)
T ss_dssp TSEEEECCSCG--GGCCHHHHHHHHHHHHHCSSEE----EEEEETTG----GGH----HHHHHHHHH----TTCC-GGGE
T ss_pred CCEEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCe----EEEEeCcH----HHH----HHHHHHHHh----cCCC-cCeE
Confidence 33444445555 4556889999999999999865 76665432 111 223333332 2432 2347
Q ss_pred EEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcC----CCC-cccc
Q 003999 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE----FIG-CSPS 487 (780)
Q Consensus 413 ~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se----~~G-~~~~ 487 (780)
+|.. ..+.++..+.|+.+||++-|--+-| +.+..||+.+|. .|+|- |+| ++.+
T Consensus 583 ~f~~-~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~Gv--------------------Pvvt~~g~~~~sR~~~s 640 (723)
T 4gyw_A 583 IFSP-VAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGT--------------------PMVTMPGETLASRVAAS 640 (723)
T ss_dssp EEEE-CCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHTTC--------------------CEEBCCCSSGGGTHHHH
T ss_pred EECC-CCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHcCC--------------------CEEEccCCCccHhHHHH
Confidence 7654 6789999999999999999998877 788999999963 33332 111 1111
Q ss_pred C-C--C--cEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh---CCHHHHHHHHHHHHHHHHHhh
Q 003999 488 L-S--G--AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST---HDVAYWARSFAQDLERACRDH 551 (780)
Q Consensus 488 l-~--~--al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~---~~~~~Wa~~~l~~l~~~~~~~ 551 (780)
+ . | -+++ +|.++-.+.-.++-++++ .+..-.+++++...+ +|...|++.|-..+..+++..
T Consensus 641 ~l~~~gl~e~ia--~~~~~Y~~~a~~la~d~~-~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r~ 709 (723)
T 4gyw_A 641 QLTCLGCLELIA--KNRQEYEDIAVKLGTDLE-YLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHY 709 (723)
T ss_dssp HHHHHTCGGGBC--SSHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCccccc--CCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHHH
Confidence 1 1 1 1222 355554444444444443 233333444544433 699999999988888887764
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=89.47 E-value=0.17 Score=51.25 Aligned_cols=29 Identities=10% Similarity=0.012 Sum_probs=23.8
Q ss_pred EeCCCCHHHHHHHHHHHcCCCC-Cccc-cCC
Q 003999 752 KPQVLRPSSISVSLSLSVCVRA-RACK-LDD 780 (780)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~i~~-~~~~-~~~ 780 (780)
.+.+.+|+.+++.+++++|+++ .+|. .||
T Consensus 156 ~~~~kp~~~~~~~~~~~lgi~~~~~~i~iGD 186 (267)
T 1swv_A 156 VPAGRPYPWMCYKNAMELGVYPMNHMIKVGD 186 (267)
T ss_dssp SSCCTTSSHHHHHHHHHHTCCSGGGEEEEES
T ss_pred cCCCCCCHHHHHHHHHHhCCCCCcCEEEEeC
Confidence 4678899999999999999998 7764 344
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=89.17 E-value=0.18 Score=50.58 Aligned_cols=36 Identities=8% Similarity=0.044 Sum_probs=29.7
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.++|+.|++. |.+++|+|+.+...++.++..+
T Consensus 79 ~pg~~~~l~~L~~~-g~~~~ivS~~~~~~~~~~l~~l 114 (236)
T 2fea_A 79 REGFREFVAFINEH-EIPFYVISGGMDFFVYPLLEGI 114 (236)
T ss_dssp CTTHHHHHHHHHHH-TCCEEEEEEEEHHHHHHHHTTT
T ss_pred CccHHHHHHHHHhC-CCeEEEEeCCcHHHHHHHHhcC
Confidence 35677889999884 8999999999998888887643
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=89.09 E-value=0.093 Score=51.36 Aligned_cols=33 Identities=15% Similarity=-0.106 Sum_probs=25.5
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSD 626 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d 626 (780)
.|+|+||+||||++ .....++.+.++++.|.+.
T Consensus 8 ik~i~fDlDGTL~~---~~~~~~~~~~~~~~~l~~~ 40 (234)
T 3ddh_A 8 IKVIAFDADDTLWS---NEPFFQEVEKQYTDLLKPY 40 (234)
T ss_dssp CCEEEECCBTTTBC---CHHHHHHHHHHHHHHTGGG
T ss_pred ccEEEEeCCCCCcc---CcchHHHHHHHHHHHHHhc
Confidence 68999999999998 3334556677788888874
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=89.01 E-value=0.19 Score=48.06 Aligned_cols=37 Identities=22% Similarity=0.300 Sum_probs=29.5
Q ss_pred CCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 611 SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 611 ~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.+.++|+.|++. |.+++|+|+.....+... ..+
T Consensus 79 ~~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~-~~~ 115 (201)
T 4ap9_A 79 NVSPEARELVETLREK-GFKVVLISGSFEEVLEPF-KEL 115 (201)
T ss_dssp CCCHHHHHHHHHHHHT-TCEEEEEEEEETTTSGGG-TTT
T ss_pred CCChhHHHHHHHHHHC-CCeEEEEeCCcHHHHHHH-HHc
Confidence 3457788999999985 899999999888777666 544
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=88.80 E-value=1.3 Score=48.35 Aligned_cols=137 Identities=11% Similarity=-0.002 Sum_probs=80.9
Q ss_pred CCeEEEEecccc---ccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 003999 333 GKKLILGIDDMD---IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (780)
Q Consensus 333 ~~~vil~Vdrld---~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~ 409 (780)
...|+++.|++. ..|.+...++|++.+ +.+ ++.+..+. . .+ . ....
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~----~v~~~g~~--~-~~----------~-----~~~~---- 285 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRR----VILSRGWT--E-LV----------L-----PDDR---- 285 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCC----EEEECTTT--T-CC----------C-----SCCC----
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC-----CCe----EEEEeCCc--c-cc----------c-----cCCC----
Confidence 356888899984 566666677776653 233 33332211 0 00 0 0111
Q ss_pred ccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----cc
Q 003999 410 EPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CS 485 (780)
Q Consensus 410 ~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~ 485 (780)
..|. +.+.+++.+ +|..||++|. +-|.| +..|+++||. |+|+--+.+ .+
T Consensus 286 ~~v~-~~~~~~~~~---ll~~~d~~v~---~~G~~-t~~Ea~~~G~-------------------P~i~~p~~~dQ~~na 338 (416)
T 1rrv_A 286 DDCF-AIDEVNFQA---LFRRVAAVIH---HGSAG-TEHVATRAGV-------------------PQLVIPRNTDQPYFA 338 (416)
T ss_dssp TTEE-EESSCCHHH---HGGGSSEEEE---CCCHH-HHHHHHHHTC-------------------CEEECCCSBTHHHHH
T ss_pred CCEE-EeccCChHH---HhccCCEEEe---cCChh-HHHHHHHcCC-------------------CEEEccCCCCcHHHH
Confidence 1254 345777654 5799999996 45654 8999999974 455533322 22
Q ss_pred ccC---CCcEEECC--CCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 486 PSL---SGAIRVNP--WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 486 ~~l---~~al~VnP--~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
..+ ..|+.+++ .+.++++++|.++ +.+ +.+.++++..+.+..
T Consensus 339 ~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~--~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 339 GRVAALGIGVAHDGPTPTFESLSAALTTV-LAP--ETRARAEAVAGMVLT 385 (416)
T ss_dssp HHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSH--HHHHHHHHHTTTCCC
T ss_pred HHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCH--HHHHHHHHHHHHHhh
Confidence 233 23677765 5789999999999 653 455556665555443
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=88.34 E-value=0.09 Score=50.13 Aligned_cols=27 Identities=7% Similarity=-0.068 Sum_probs=21.6
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCccccCC
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKLDD 780 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~~~ 780 (780)
+.+..|+.+++.+++.+|++ +.+..||
T Consensus 134 ~~~kp~~~~~~~~~~~~~~~-~~~~iGD 160 (190)
T 2fi1_A 134 FKRKPNPESMLYLREKYQIS-SGLVIGD 160 (190)
T ss_dssp CCCTTSCHHHHHHHHHTTCS-SEEEEES
T ss_pred CCCCCCHHHHHHHHHHcCCC-eEEEEcC
Confidence 45667899999999999999 5555665
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=88.18 E-value=6.1 Score=42.78 Aligned_cols=138 Identities=11% Similarity=0.059 Sum_probs=81.3
Q ss_pred CCCeEEEEecccc-ccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 003999 332 DGKKLILGIDDMD-IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (780)
Q Consensus 332 ~~~~vil~Vdrld-~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~ 410 (780)
..+.|+++.|++. ..+.+...++|++++ +++ +|.++.+.... . . +. ..
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~----vv~~~g~~~~~-----~-----------~----~~--~~ 268 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR----VVLSSGWAGLG-----R-----------I----DE--GD 268 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC----EEEECTTTTCC-----C-----------S----SC--CT
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE----EEEEeCCcccc-----c-----------c----cC--CC
Confidence 3467888899998 566666666666553 233 33333221000 0 0 00 11
Q ss_pred cEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcc----c
Q 003999 411 PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS----P 486 (780)
Q Consensus 411 pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~ 486 (780)
.|.+. +.+++.+ ++..||++|-.+ |. .+..|++++|. |+|+--+.|-- .
T Consensus 269 ~v~~~-~~~~~~~---ll~~~d~~v~~g---G~-~t~~Eal~~Gv-------------------P~v~~p~~~dQ~~na~ 321 (404)
T 3h4t_A 269 DCLVV-GEVNHQV---LFGRVAAVVHHG---GA-GTTTAVTRAGA-------------------PQVVVPQKADQPYYAG 321 (404)
T ss_dssp TEEEE-SSCCHHH---HGGGSSEEEECC---CH-HHHHHHHHHTC-------------------CEEECCCSTTHHHHHH
T ss_pred CEEEe-cCCCHHH---HHhhCcEEEECC---cH-HHHHHHHHcCC-------------------CEEEcCCcccHHHHHH
Confidence 35544 5777654 567899998544 43 46689999975 45554443321 1
Q ss_pred cC---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 487 SL---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 487 ~l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
.+ +.|+.+++. +.+++++++.++|+ + +.+.++++..+.+..
T Consensus 322 ~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~--~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 322 RVADLGVGVAHDGPTPTVESLSAALATALT-P--GIRARAAAVAGTIRT 367 (404)
T ss_dssp HHHHHTSEEECSSSSCCHHHHHHHHHHHTS-H--HHHHHHHHHHTTCCC
T ss_pred HHHHCCCEeccCcCCCCHHHHHHHHHHHhC-H--HHHHHHHHHHHHHhh
Confidence 12 236777653 78999999999998 4 455566666555544
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=88.15 E-value=0.049 Score=53.80 Aligned_cols=25 Identities=8% Similarity=-0.138 Sum_probs=20.4
Q ss_pred CCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 754 QVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 754 ~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
.+-.|+.+++.+++.+|+++.+|.+
T Consensus 153 ~~kp~~~~~~~~~~~~~~~~~~~~~ 177 (234)
T 3u26_A 153 FFKPHPRIFELALKKAGVKGEEAVY 177 (234)
T ss_dssp BCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCcCHHHHHHHHHHcCCCchhEEE
Confidence 3456788899999999999988753
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=88.05 E-value=0.11 Score=51.40 Aligned_cols=27 Identities=4% Similarity=0.160 Sum_probs=23.2
Q ss_pred EeCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 752 KPQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
.+.+..|+.+++.+++++|+++.+|.+
T Consensus 156 ~~~~kp~~~~~~~~~~~lg~~~~~~i~ 182 (237)
T 4ex6_A 156 VERGKPHPDMALHVARGLGIPPERCVV 182 (237)
T ss_dssp SSSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence 456788999999999999999988753
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=87.76 E-value=0.027 Score=58.08 Aligned_cols=26 Identities=4% Similarity=-0.198 Sum_probs=22.1
Q ss_pred eCCCCHHHHHHHHHHHcCC-------CCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCV-------RARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i-------~~~~~~~ 778 (780)
+.+..|+.+++.+++.+|+ ++.+|.+
T Consensus 167 ~~~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~ 199 (275)
T 2qlt_A 167 KQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVV 199 (275)
T ss_dssp SSCTTSSHHHHHHHHHTTCCCCSSCGGGSCEEE
T ss_pred CCCCCChHHHHHHHHHcCCCccccCCCcceEEE
Confidence 5677899999999999999 8887753
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=87.52 E-value=0.099 Score=49.98 Aligned_cols=30 Identities=17% Similarity=0.271 Sum_probs=22.0
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHh
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTL 623 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L 623 (780)
.|+|+||+||||++ .....++.+.++++++
T Consensus 4 ~k~i~fDlDGTL~~---~~~~~~~~~~~~~~~~ 33 (207)
T 2go7_A 4 KTAFIWDLDGTLLD---SYEAILSGIEETFAQF 33 (207)
T ss_dssp CCEEEECTBTTTEE---CHHHHHHHHHHHHHHH
T ss_pred ccEEEEeCCCcccc---cHHHHHHHHHHHHHHc
Confidence 57999999999998 3333445666777765
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=87.21 E-value=0.13 Score=50.19 Aligned_cols=48 Identities=19% Similarity=0.102 Sum_probs=29.9
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCC--CEEEEEcCCChhh
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPN--NTVFIVSGRGRSS 641 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g--~~V~IvSGR~~~~ 641 (780)
.|+|+||+||||++ ......+.+.++++++-.... ..+...+|++...
T Consensus 9 ~k~i~fDlDGTL~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~ 58 (226)
T 1te2_A 9 ILAAIFDMDGLLID---SEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDM 58 (226)
T ss_dssp CCEEEECCBTTTBC---CHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHH
T ss_pred CCEEEECCCCCcCc---CHHHHHHHHHHHHHHcCCCCChHHHHHHHhCCCHHH
Confidence 68999999999998 333344566677776633210 1233457777554
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=87.04 E-value=0.14 Score=50.23 Aligned_cols=26 Identities=8% Similarity=-0.101 Sum_probs=23.0
Q ss_pred eCC--CCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQV--LRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~g--vsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+ .+|+.+++.+++++|+++.+|.+
T Consensus 138 ~~~~~kpk~~~~~~~~~~l~~~~~~~i~ 165 (229)
T 2fdr_A 138 GADRVKPKPDIFLHGAAQFGVSPDRVVV 165 (229)
T ss_dssp CTTCCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred ccCCCCcCHHHHHHHHHHcCCChhHeEE
Confidence 677 89999999999999999988753
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=86.89 E-value=0.12 Score=50.87 Aligned_cols=23 Identities=9% Similarity=-0.084 Sum_probs=19.5
Q ss_pred CCCHHHHHHHHHHHcCCCCCccc
Q 003999 755 VLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 755 gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+-.|+.+++.+++++|+++++|.
T Consensus 157 ~kp~~~~~~~~~~~lgi~~~~~~ 179 (235)
T 2om6_A 157 YKPRKEMFEKVLNSFEVKPEESL 179 (235)
T ss_dssp CTTCHHHHHHHHHHTTCCGGGEE
T ss_pred CCCCHHHHHHHHHHcCCCccceE
Confidence 34578999999999999998875
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.58 E-value=0.39 Score=47.29 Aligned_cols=60 Identities=12% Similarity=0.056 Sum_probs=45.9
Q ss_pred hccCceEEeCCCCCCCCCCCCC--------------------CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc
Q 003999 588 KTERRAIFLDYDGTVVPETSII--------------------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~~--------------------~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~ 647 (780)
..+++.++||+||||+...... -..-+.+.+.|+.|.+. ..++|+|......++..+.
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~--~~i~I~Tss~~~~a~~vl~ 102 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL--FECVLFTASLAKYADPVAD 102 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH--SEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC--CeEEEEcCCCHHHHHHHHH
Confidence 4578999999999999732110 01236788999999983 8999999999999888776
Q ss_pred cC
Q 003999 648 PC 649 (780)
Q Consensus 648 ~l 649 (780)
.+
T Consensus 103 ~l 104 (195)
T 2hhl_A 103 LL 104 (195)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=86.48 E-value=0.14 Score=50.25 Aligned_cols=26 Identities=4% Similarity=-0.012 Sum_probs=23.0
Q ss_pred EeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 752 KPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.+.+..|+.+++.+++.+|+++.+|.
T Consensus 138 ~~~~kp~~~~~~~~~~~lgi~~~~~i 163 (226)
T 3mc1_A 138 DGKLSTKEDVIRYAMESLNIKSDDAI 163 (226)
T ss_dssp TSSSCSHHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCCCCHHHHHHHHHHhCcCcccEE
Confidence 36688999999999999999988775
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=86.29 E-value=0.14 Score=50.62 Aligned_cols=26 Identities=12% Similarity=0.112 Sum_probs=17.7
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+-.|+.+++.+++.+|+++.+|.+
T Consensus 143 ~~~Kp~~~~~~~~~~~lgi~~~~~i~ 168 (233)
T 3nas_A 143 AKGKPDPDIFLTAAAMLDVSPADCAA 168 (233)
T ss_dssp ------CCHHHHHHHHHTSCGGGEEE
T ss_pred CCCCCChHHHHHHHHHcCCCHHHEEE
Confidence 34556677999999999999988754
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=86.24 E-value=0.14 Score=50.46 Aligned_cols=26 Identities=4% Similarity=-0.257 Sum_probs=21.7
Q ss_pred eCCCCHHHHHHHHHHHcC-CCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVC-VRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~-i~~~~~~~ 778 (780)
..+-.|+.+++.+++.+| +++.+|.+
T Consensus 155 ~~~kp~~~~~~~~~~~~g~~~~~~~i~ 181 (238)
T 3ed5_A 155 GFQKPMKEYFNYVFERIPQFSAEHTLI 181 (238)
T ss_dssp TSCTTCHHHHHHHHHTSTTCCGGGEEE
T ss_pred CCCCCChHHHHHHHHHcCCCChhHeEE
Confidence 346677999999999999 99988754
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=86.22 E-value=0.16 Score=50.62 Aligned_cols=26 Identities=4% Similarity=-0.207 Sum_probs=22.6
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+..|+.+++.+++.+|+++.+|.+
T Consensus 163 ~~~kp~~~~~~~~~~~lg~~~~~~i~ 188 (243)
T 3qxg_A 163 KYGKPNPEPYLMALKKGGLKADEAVV 188 (243)
T ss_dssp SSCTTSSHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 56778899999999999999988863
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=85.92 E-value=0.16 Score=48.87 Aligned_cols=24 Identities=13% Similarity=0.037 Sum_probs=20.4
Q ss_pred CCCCHHHHHHHHHHHcCCCCCccc
Q 003999 754 QVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 754 ~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.+-.|+.+++.+++.+|+++++|.
T Consensus 143 ~~kp~~~~~~~~~~~~~~~~~~~~ 166 (214)
T 3e58_A 143 ESKPNPEIYLTALKQLNVQASRAL 166 (214)
T ss_dssp SCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred CCCCChHHHHHHHHHcCCChHHeE
Confidence 455678999999999999998874
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=85.87 E-value=0.12 Score=51.71 Aligned_cols=29 Identities=3% Similarity=-0.015 Sum_probs=25.1
Q ss_pred EEEeCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 750 EVKPQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 750 EI~p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
|..+.+..|+.+++.+++++|+++++|.+
T Consensus 167 ~~~~~~kp~~~~~~~~~~~lgi~~~~~~~ 195 (254)
T 3umc_A 167 DLFGHYKPDPQVYLGACRLLDLPPQEVML 195 (254)
T ss_dssp HHHTCCTTSHHHHHHHHHHHTCCGGGEEE
T ss_pred cccccCCCCHHHHHHHHHHcCCChHHEEE
Confidence 45578899999999999999999988754
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=85.83 E-value=0.15 Score=50.68 Aligned_cols=27 Identities=4% Similarity=-0.029 Sum_probs=22.6
Q ss_pred EeCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 752 KPQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 752 ~p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
.+.+-.|+.+++.+++++|+++.+|.+
T Consensus 165 ~~~~kp~~~~~~~~~~~lgi~~~~~~~ 191 (254)
T 3umg_A 165 NRKYKPDPQAYLRTAQVLGLHPGEVML 191 (254)
T ss_dssp HTCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence 345677899999999999999988754
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=85.20 E-value=0.17 Score=49.84 Aligned_cols=26 Identities=8% Similarity=-0.141 Sum_probs=22.2
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+..|+.+++.+++++|+++++|.+
T Consensus 159 ~~~kp~~~~~~~~~~~lgi~~~~~~~ 184 (240)
T 3qnm_A 159 GVLKPRPEIFHFALSATQSELRESLM 184 (240)
T ss_dssp TCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 45677899999999999999988753
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=85.18 E-value=0.83 Score=47.50 Aligned_cols=49 Identities=24% Similarity=0.341 Sum_probs=38.4
Q ss_pred CceEEeCCCCCCCCCCCCC---------CCCCHHHHHHHHHhccCCCCEEEEEcCCChh
Q 003999 591 RRAIFLDYDGTVVPETSII---------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRS 640 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~---------~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~ 640 (780)
.+.+++|.|||+....... ..+-+.+.++|+.|++. |++++|+|||+..
T Consensus 159 ~~~i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~-g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 159 PKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALM-GYQIVVVSGRESG 216 (301)
T ss_dssp CEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHT-TCEEEEEECSCCC
T ss_pred cceEEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHHHC-CCeEEEEeCCCcc
Confidence 4678899999987633111 23468999999999985 9999999999854
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=85.04 E-value=0.53 Score=45.68 Aligned_cols=60 Identities=10% Similarity=0.052 Sum_probs=45.4
Q ss_pred hccCceEEeCCCCCCCCCCCCC--------------------CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhc
Q 003999 588 KTERRAIFLDYDGTVVPETSII--------------------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~~--------------------~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~ 647 (780)
..+++.+++|+||||+...... -.+-+.+.+.|++|.+. ..++|+|......++..+.
T Consensus 12 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~--~~i~I~T~~~~~~a~~vl~ 89 (181)
T 2ght_A 12 DSDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL--FECVLFTASLAKYADPVAD 89 (181)
T ss_dssp GTTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH--SEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC--CCEEEEcCCCHHHHHHHHH
Confidence 3567899999999998632110 01246788999999883 8999999999998888776
Q ss_pred cC
Q 003999 648 PC 649 (780)
Q Consensus 648 ~l 649 (780)
.+
T Consensus 90 ~l 91 (181)
T 2ght_A 90 LL 91 (181)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=84.93 E-value=0.19 Score=49.91 Aligned_cols=26 Identities=0% Similarity=-0.253 Sum_probs=22.7
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+..|+.+++.+++.+|+++.+|.+
T Consensus 162 ~~~kp~~~~~~~~~~~lg~~~~~~i~ 187 (247)
T 3dv9_A 162 KYGKPNPEPYLMALKKGGFKPNEALV 187 (247)
T ss_dssp SSCTTSSHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCCCHHHHHHHHHcCCChhheEE
Confidence 56778899999999999999988853
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.25 E-value=0.18 Score=50.47 Aligned_cols=25 Identities=8% Similarity=0.049 Sum_probs=20.3
Q ss_pred eCCCCHHHHHHHHHHHcCCCC--Cccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRA--RACK 777 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~--~~~~ 777 (780)
..+-.|..+++.+++.+|+++ ++|.
T Consensus 168 ~~~Kp~~~~~~~~~~~lgi~~~~~~~i 194 (250)
T 3l5k_A 168 QHGKPDPDIFLACAKRFSPPPAMEKCL 194 (250)
T ss_dssp CSCTTSTHHHHHHHHTSSSCCCGGGEE
T ss_pred cCCCCChHHHHHHHHHcCCCCCcceEE
Confidence 455667889999999999987 7664
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=84.02 E-value=0.18 Score=50.89 Aligned_cols=24 Identities=4% Similarity=0.033 Sum_probs=20.7
Q ss_pred CCCCHHHHHHHHHHHcCCCCCccc
Q 003999 754 QVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 754 ~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.+..|+.+++.+++.+|+++++|.
T Consensus 166 ~~Kp~~~~~~~~~~~lgi~~~~~i 189 (259)
T 4eek_A 166 RGKPHPDLYTFAAQQLGILPERCV 189 (259)
T ss_dssp CCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred CCCCChHHHHHHHHHcCCCHHHEE
Confidence 566679999999999999998875
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=83.80 E-value=0.47 Score=56.36 Aligned_cols=68 Identities=10% Similarity=0.160 Sum_probs=55.7
Q ss_pred HHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 581 HIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 581 ~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
...+.|.....+.+++.+||+++..-....++.+++.++|++|++. |++|+++|||...........+
T Consensus 524 ~~~~~~~~~G~~vl~va~d~~~~G~i~i~D~i~~~~~~aI~~L~~~-Gi~v~mlTGd~~~~a~~ia~~l 591 (736)
T 3rfu_A 524 EKADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQS-GIEIVMLTGDSKRTAEAVAGTL 591 (736)
T ss_dssp HHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCSSHHHHHHHHHHH-TCEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEEeeccchhhHHHHHHHHHHC-CCeEEEECCCCHHHHHHHHHHc
Confidence 3455667778899999999998764334456788999999999995 9999999999999998887665
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=83.78 E-value=0.82 Score=50.84 Aligned_cols=32 Identities=16% Similarity=0.191 Sum_probs=24.1
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCC------ChhhHHHH
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGR------GRSSLSEW 645 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR------~~~~L~~~ 645 (780)
.+.+.++|+.|++. |.+++|+|+. ....+...
T Consensus 102 ~~~~~~~L~~L~~~-g~~~~i~Tn~~~~~~~~~~~~~~~ 139 (555)
T 3i28_A 102 NRPMLQAALMLRKK-GFTTAILTNTWLDDRAERDGLAQL 139 (555)
T ss_dssp CHHHHHHHHHHHHT-TCEEEEEECCCCCCSTTHHHHHHH
T ss_pred ChhHHHHHHHHHHC-CCEEEEEeCCCccccchhhHHHHH
Confidence 35677889999985 9999999997 55555543
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=83.71 E-value=0.2 Score=49.10 Aligned_cols=26 Identities=4% Similarity=0.051 Sum_probs=22.3
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+..|+.+++.+++.+|+++.+|.+
T Consensus 144 ~~~kp~~~~~~~~~~~l~~~~~~~i~ 169 (233)
T 3s6j_A 144 SYGKPDPDLFLAAAKKIGAPIDECLV 169 (233)
T ss_dssp SCCTTSTHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCCChHHHHHHHHHhCCCHHHEEE
Confidence 55778899999999999999987753
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=83.61 E-value=0.59 Score=44.81 Aligned_cols=22 Identities=9% Similarity=-0.082 Sum_probs=17.9
Q ss_pred CHHHHHHHHHHHcCCCCCcccc
Q 003999 757 RPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 757 sKG~al~~Ll~~l~i~~~~~~~ 778 (780)
.+...++.+++.+|+++++|.+
T Consensus 142 p~~~~~~~~~~~~~~~~~~~~~ 163 (200)
T 3cnh_A 142 PNPAMYRLGLTLAQVRPEEAVM 163 (200)
T ss_dssp TCHHHHHHHHHHHTCCGGGEEE
T ss_pred CCHHHHHHHHHHcCCCHHHeEE
Confidence 4467889999999999988753
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=83.42 E-value=0.5 Score=50.44 Aligned_cols=35 Identities=11% Similarity=0.077 Sum_probs=30.7
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
-++++++++.|+++ |..|+||||-....++.+...
T Consensus 145 ~~~~~~l~~~l~~~-G~~v~ivSas~~~~v~~~a~~ 179 (327)
T 4as2_A 145 FSGQRELYNKLMEN-GIEVYVISAAHEELVRMVAAD 179 (327)
T ss_dssp CHHHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHhh
Confidence 35688899999995 999999999999999998865
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=83.11 E-value=0.79 Score=49.30 Aligned_cols=88 Identities=8% Similarity=-0.063 Sum_probs=54.3
Q ss_pred ecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----ccccC--
Q 003999 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CSPSL-- 488 (780)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~l-- 488 (780)
+.+.+|+.+ ++..||+||. +-|+| +..|+++||. |+|+--+.+ .+..+
T Consensus 292 ~~~~~p~~~---lL~~~~~~v~---h~G~~-s~~Eal~~Gv-------------------P~v~~P~~~dQ~~na~~v~~ 345 (400)
T 4amg_A 292 VVEWIPLGA---LLETCDAIIH---HGGSG-TLLTALAAGV-------------------PQCVIPHGSYQDTNRDVLTG 345 (400)
T ss_dssp EECCCCHHH---HHTTCSEEEE---CCCHH-HHHHHHHHTC-------------------CEEECCC---CHHHHHHHHH
T ss_pred EEeecCHHH---Hhhhhhheec---cCCcc-HHHHHHHhCC-------------------CEEEecCcccHHHHHHHHHH
Confidence 445777654 5688999774 45666 6689999974 555533322 22223
Q ss_pred -CCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCC
Q 003999 489 -SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHD 532 (780)
Q Consensus 489 -~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~ 532 (780)
.-|+.+++. +.++++|.++|+++ +.++|.+++.+.+...+
T Consensus 346 ~G~g~~l~~~--~~~~~al~~lL~d~--~~r~~a~~l~~~~~~~~ 386 (400)
T 4amg_A 346 LGIGFDAEAG--SLGAEQCRRLLDDA--GLREAALRVRQEMSEMP 386 (400)
T ss_dssp HTSEEECCTT--TCSHHHHHHHHHCH--HHHHHHHHHHHHHHTSC
T ss_pred CCCEEEcCCC--CchHHHHHHHHcCH--HHHHHHHHHHHHHHcCC
Confidence 226666654 45789999999875 34555666666665543
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=82.77 E-value=0.21 Score=48.99 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=19.8
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKT 622 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~ 622 (780)
+.|+|+||+||||++ ......+.+.+++++
T Consensus 5 ~~k~i~fD~DGTL~d---~~~~~~~~~~~~~~~ 34 (240)
T 3smv_A 5 DFKALTFDCYGTLID---WETGIVNALQPLAKR 34 (240)
T ss_dssp GCSEEEECCBTTTBC---HHHHHHHHTHHHHHH
T ss_pred cceEEEEeCCCcCcC---CchhHHHHHHHHHHH
Confidence 468999999999998 222233444455544
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=82.36 E-value=0.22 Score=48.25 Aligned_cols=23 Identities=13% Similarity=-0.064 Sum_probs=20.8
Q ss_pred CCCH--HHHHHHHHHHcCCCCCccc
Q 003999 755 VLRP--SSISVSLSLSVCVRARACK 777 (780)
Q Consensus 755 gvsK--G~al~~Ll~~l~i~~~~~~ 777 (780)
+.+| +.+++.+++.+|+++++|.
T Consensus 135 ~~~KP~~~~~~~~~~~~~~~~~~~i 159 (209)
T 2hdo_A 135 PKRKPDPLPLLTALEKVNVAPQNAL 159 (209)
T ss_dssp SCCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCCcHHHHHHHHHcCCCcccEE
Confidence 6789 9999999999999998874
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=82.08 E-value=0.26 Score=48.26 Aligned_cols=26 Identities=4% Similarity=0.045 Sum_probs=22.8
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+-.|..+...+++++|+++.+|.+
T Consensus 134 ~~~Kp~p~~~~~~~~~lg~~p~~~~~ 159 (210)
T 2ah5_A 134 PEAPHKADVIHQALQTHQLAPEQAII 159 (210)
T ss_dssp SSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCCChHHHHHHHHHcCCCcccEEE
Confidence 56778999999999999999988853
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=81.75 E-value=0.27 Score=48.99 Aligned_cols=26 Identities=8% Similarity=-0.084 Sum_probs=20.9
Q ss_pred eCCCCHHHHHHHHHHHcCCCCCcccc
Q 003999 753 PQVLRPSSISVSLSLSVCVRARACKL 778 (780)
Q Consensus 753 p~gvsKG~al~~Ll~~l~i~~~~~~~ 778 (780)
+.+-.|..+++.+++.+|+++.+|.+
T Consensus 147 ~~~Kp~~~~~~~~~~~~g~~~~~~i~ 172 (241)
T 2hoq_A 147 GVKKPHPKIFKKALKAFNVKPEEALM 172 (241)
T ss_dssp TCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 34556779999999999999988753
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=80.85 E-value=0.98 Score=52.80 Aligned_cols=68 Identities=10% Similarity=0.094 Sum_probs=55.4
Q ss_pred HHHHHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 581 HIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 581 ~i~~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
...+.+.....+.+++.+||+++..-....++.+++.++|++|++. |++++++||+...........+
T Consensus 427 ~~~~~~~~~g~~~l~va~~~~~~G~i~~~D~l~~~~~~~i~~L~~~-Gi~v~~~TGd~~~~a~~ia~~l 494 (645)
T 3j08_A 427 LALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRM-GIKVGMITGDNWRSAEAISREL 494 (645)
T ss_dssp HHHHHHHTTTCCCEEEEETTEEEEEEEEECCCTTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEEECCEEEEEEEecCCchhHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHc
Confidence 3445566677899999999998764334556888999999999995 9999999999999998887765
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=80.07 E-value=0.32 Score=48.23 Aligned_cols=27 Identities=4% Similarity=-0.073 Sum_probs=22.9
Q ss_pred EEeCCCCHHHHHHHHHHHcCCC-CCccc
Q 003999 751 VKPQVLRPSSISVSLSLSVCVR-ARACK 777 (780)
Q Consensus 751 I~p~gvsKG~al~~Ll~~l~i~-~~~~~ 777 (780)
..+.+..|+.+++.+++.+|++ +++|.
T Consensus 161 ~~~~~kp~~~~~~~~~~~~g~~~~~~~i 188 (240)
T 3sd7_A 161 LDGTRVNKNEVIQYVLDLCNVKDKDKVI 188 (240)
T ss_dssp TTSCCCCHHHHHHHHHHHHTCCCGGGEE
T ss_pred ccCCCCCCHHHHHHHHHHcCCCCCCcEE
Confidence 3456788999999999999999 87775
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 780 | ||||
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-118 | |
| d1u02a_ | 229 | c.108.1.15 (A:) Trehalose-6-phosphate phosphatase | 3e-15 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-07 | |
| d1s2oa1 | 244 | c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 { | 8e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 8e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 0.001 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 0.002 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 0.003 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 363 bits (932), Expect = e-118
Identities = 128/487 (26%), Positives = 223/487 (45%), Gaps = 36/487 (7%)
Query: 60 RKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQ 119
R ++V+N + + G + G ++ G + E
Sbjct: 2 RLVVVSNRIAPPDEHAASAGGLAVGIL----------GALKAAGGLWFGWSGETGN--ED 49
Query: 120 EEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQA 179
+ + + + L ++Y F LWP FHY L + +F R W
Sbjct: 50 QPLKKVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWDG 104
Query: 180 YVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY 239
Y+ N + ADK++ ++ DD +W+HDYHL+ LRKR ++GFFLH PFP+ EI+
Sbjct: 105 YLRVNALLADKLLPLLQDDD-IIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTPEIF 163
Query: 240 RTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 299
LP D +L L + DL+GF T + FL C S + + S + H +G+
Sbjct: 164 NALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHT---AWGKAFRT 220
Query: 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQL 359
++ P+G+ + P K+ +++ + + I ++ +D KG+ + LA E L
Sbjct: 221 EVYPIGIEPKEIAKQAAGPLPP-KLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEAL 279
Query: 360 LQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419
L+++P GK+ QI +RG + Q+ + + A RIN YG + P+ +++
Sbjct: 280 LEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHF 339
Query: 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479
R + ++ +V +RDGMNLV +Y+ P + +LV+S
Sbjct: 340 DRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAA--QDP------------ANPGVLVLS 385
Query: 480 EFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539
+F G + L+ A+ VNP+D D VA A+ A+ M +E+ RH + + +D+ +W
Sbjct: 386 QFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQEC 445
Query: 540 FAQDLER 546
F DL++
Sbjct: 446 FISDLKQ 452
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 229 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 73.4 bits (179), Expect = 3e-15
Identities = 35/162 (21%), Positives = 59/162 (36%), Gaps = 11/162 (6%)
Query: 594 IFLDYDGTVVPETSII--KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
IFLDYDGT+VP ++S++ L +IV+GR +S +L
Sbjct: 3 IFLDYDGTLVPIIMNPEESYADAGLLSLISDLK--ERFDTYIVTGRSPEEISRFLPLDI- 59
Query: 652 LGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWH 711
+ HG + N + L + RS+ G I K A+++H
Sbjct: 60 -NMICYHGACSKINGQIVYNNGSD-RFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYH 117
Query: 712 HQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKP 753
D +L +E + G+ I+E++
Sbjct: 118 LGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIELRV 155
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 50.0 bits (118), Expect = 3e-07
Identities = 22/162 (13%), Positives = 51/162 (31%), Gaps = 18/162 (11%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
R +D DG + +I + I +++ TV ++SG + A
Sbjct: 4 RLAAIDVDGNLTDRDRLIS---TKAIESIRSA-EKKGLTVSLLSGN---VIPVVYALKIF 56
Query: 652 LGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWH 711
LGI +G N ++ + + + ++ T +I
Sbjct: 57 LGI---NGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSI--------LT 105
Query: 712 HQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKP 753
++ + G E +D++ + V+ + +
Sbjct: 106 NRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMN 147
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Score = 48.9 bits (115), Expect = 8e-07
Identities = 23/169 (13%), Positives = 50/169 (29%), Gaps = 17/169 (10%)
Query: 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTL--CSDPNNTVFIVSGRGRSS---LSEW 645
+ + D D T V + + + L+ N + +GR S L +
Sbjct: 3 QLLLISDLDNTWVGD--------QQALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQ 54
Query: 646 LAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKE 705
+ E G I + + ++ + I++ + + S +E
Sbjct: 55 VGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNP 114
Query: 706 SALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQ 754
+ +H Q E+L + + V++ PQ
Sbjct: 115 WKISYHLDPQACPTVIDQLTEMLKETGIPVQV----IFSSGKDVDLLPQ 159
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 44.2 bits (103), Expect = 2e-05
Identities = 21/162 (12%), Positives = 48/162 (29%), Gaps = 16/162 (9%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
+AI +D DGT+ +I + + ++ + +V+G
Sbjct: 3 KAISIDIDGTITYPNRMIH---EKALEAIRRA-ESLGIPIMLVTGNTVQFAEAASILI-- 56
Query: 652 LGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWH 711
G + + + + L + E + + + + A + + + LV
Sbjct: 57 -GTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIM 115
Query: 712 HQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKP 753
+ + + EL N V + VK
Sbjct: 116 RETINVETVREIINEL---------NLNLVAVDSGFAIHVKK 148
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 39.6 bits (91), Expect = 8e-04
Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
+ I +D DGT++ I P V + + + V + +GR + + +L +
Sbjct: 5 KLIAIDMDGTLLLPDHTIS---PAVKNAIAAARAR-GVNVVLTTGRPYAGVHNYL---KE 57
Query: 652 LGIAAEHGYFIRWNKTSEWETNH 674
L + Y I +N +
Sbjct: 58 LHMEQPGDYCITYNGALVQKAAD 80
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 39.1 bits (90), Expect = 0.001
Identities = 13/95 (13%), Positives = 28/95 (29%), Gaps = 4/95 (4%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
+ I +D DGT++ + E + L+ D V + +GR + P +
Sbjct: 2 KLIAIDLDGTLLNSKHQV---SLENENALRQAQRD-GIEVVVSTGRAHFDVMSIFEPLGI 57
Query: 652 LGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVE 686
+ + + I+
Sbjct: 58 KTWVISANGAVIHDPEGRLYHHETIDKKRAYDILS 92
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 38.4 bits (88), Expect = 0.002
Identities = 13/95 (13%), Positives = 25/95 (26%), Gaps = 3/95 (3%)
Query: 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM 651
+ I D DGT + + P ++ + L + SG L + +
Sbjct: 3 KVIVTDMDGTFLNDAKTYNQ--PRFMAQYQEL-KKRGIKFVVASGNQYYQLISFFPELKD 59
Query: 652 LGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVE 686
+ + + L I E
Sbjct: 60 EISFVAENGALVYEHGKQLFHGELTRHESRIVIGE 94
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 38.1 bits (87), Expect = 0.003
Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Query: 585 AYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSE 644
A + + + + +D+DGT+ + E I +K + V I +GR + +
Sbjct: 4 ALKGADIKLLLIDFDGTLFVDKD--IKVPSENIDAIKEA-IEKGYMVSICTGRSKVGILS 60
Query: 645 WLAPCEMLGIAAEHGYFIRWN 665
+ + + N
Sbjct: 61 AFGEENLKKMNFYGMPGVYIN 81
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 780 | |||
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 99.91 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.91 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.84 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 99.8 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.79 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.67 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.64 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.64 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.64 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.63 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.58 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.56 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.55 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.52 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.5 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.41 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.4 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.34 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.32 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.53 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.17 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.12 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 96.62 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 96.5 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.35 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 96.27 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 96.14 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 95.7 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 95.48 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 95.47 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 94.81 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 94.61 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 94.48 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 94.05 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 93.95 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 93.76 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 93.69 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 93.22 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 93.17 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 93.15 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 92.86 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 92.57 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 91.33 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 91.29 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 91.1 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 90.33 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 87.72 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 87.12 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 85.19 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 82.74 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 81.97 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 81.61 |
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6e-100 Score=863.37 Aligned_cols=453 Identities=27% Similarity=0.522 Sum_probs=416.1
Q ss_pred CcEEEEECCCccceeecCCCCcEEEEecCChhHHhhhhcccCCCCeEEEEccCCCCChhHHHHHHHhhccCccEEEeecC
Q 003999 59 ERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLP 138 (780)
Q Consensus 59 ~r~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~wvg~~~~~~~~~~~~~v~~~l~~~~~~~pv~l~ 138 (780)
+||||||||+|+...+. .++|||+++|.+.+ .+.+++||||+|.+.++++ .+......+|+|+||+|+
T Consensus 1 srlivvsnr~~~~~~~~---------~~~gGl~~al~~~~-~~~~g~Wvgw~g~~~~~~~--~~~~~~~~~~~~~~v~l~ 68 (456)
T d1uqta_ 1 SRLVVVSNRIAPPDEHA---------ASAGGLAVGILGAL-KAAGGLWFGWSGETGNEDQ--PLKKVKKGNITWASFNLS 68 (456)
T ss_dssp CCEEEEEEECCCCC-------------CCCHHHHHHHHHH-HHHCEEEEEEEEEESCCSS--CCEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCCCCCCC---------CCCccHHHHhHHHH-hhCCCEEEecCCCCCcccc--hhhhhhccCceeEEecCC
Confidence 58999999999976543 35789999997555 4679999999987654322 122334678999999999
Q ss_pred hHhhhhHhhccccccccccccccCCCCCCCCCccCHHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHH
Q 003999 139 HDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRK 218 (780)
Q Consensus 139 ~~~~~~~y~gf~~~~LWpl~H~~~~~~~~~~~~f~~~~w~~Y~~vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~ 218 (780)
++++++||+||||++|||+|||+++.. +|++++|++|+++|++||++|++.+++ +|+||||||||+++|.+||+
T Consensus 69 ~~~~~~~Y~gf~n~~LWpl~H~~~~~~-----~~~~~~~~~Y~~vN~~fA~~l~~~~~~-~d~iwvhDyhl~llp~~lR~ 142 (456)
T d1uqta_ 69 EQDLDEYYNQFSNAVLWPAFHYRLDLV-----QFQRPAWDGYLRVNALLADKLLPLLQD-DDIIWIHDYHLLPFAHELRK 142 (456)
T ss_dssp HHHHHHHTTTHHHHTHHHHHTTCGGGC-----CCCHHHHHHHHHHHHHHHHHHGGGCCT-TCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccccCccccc-----cccHHHHHHHHHHHHHHHHHHHHhccC-CCeEEEeccchhhhHHHHHH
Confidence 999999999999999999999998873 799999999999999999999999997 59999999999999999999
Q ss_pred hcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEE
Q 003999 219 RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVY 298 (780)
Q Consensus 219 ~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~ 298 (780)
+.|+++||||+|+|||++++|+++|++++|+++++++|+||||+++|++||+++|.++++.+..... .+.+.|+.++
T Consensus 143 ~~~~~~i~~flH~pfP~~~~fr~lp~~~~il~~ll~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~---~i~~~gr~v~ 219 (456)
T d1uqta_ 143 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAK---SHTAWGKAFR 219 (456)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTT---EEEETTEEEE
T ss_pred hCCCCcEEEEeCCCCCChHHhccCcchHHHHHHhhccccccccCHHHHHHHHHHHHHHhCcccccCC---eEEecCceee
Confidence 9999999999999999999999999999999999999999999999999999999999998765543 4778999999
Q ss_pred EEEeecCCCchhhhhhcCCchhHHHHHHHHHHcCCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcC
Q 003999 299 IKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNP 378 (780)
Q Consensus 299 i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 378 (780)
+.++|+|||++.|......+ ..+.+.+++++++|+++|++|||+|+.||+..+|+||++||++||+++++++|+|++.|
T Consensus 220 v~~~p~GID~~~~~~~~~~~-~~~~~~~l~~~~~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~ 298 (456)
T d1uqta_ 220 TEVYPIGIEPKEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 298 (456)
T ss_dssp EEECCCCCCHHHHHHHHHSC-CCHHHHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCB
T ss_pred eeeecCcccchhhhhhcccH-HHHHHHHHHHhcCCCeEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCC
Confidence 99999999999998765444 34567788999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCC
Q 003999 379 ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458 (780)
Q Consensus 379 ~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~ 458 (780)
++++.++|.+++.++.++|++||++|+..+|.|++++.+.++.+++.++|+.||||++||++||||||++||||||.+
T Consensus 299 ~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p-- 376 (456)
T d1uqta_ 299 SRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 376 (456)
T ss_dssp CSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCT--
T ss_pred cccchHHHHHHHHHHHHHHHHHHhhhccCCCCceeeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred ccccccccCCCCCCCceEEEcCCCCccccCCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHH
Q 003999 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (780)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~ 538 (780)
.++|+||+|+++|+++++.+|++|||||++++|+||.+||+||++||++|+++++++|.+||+..|++
T Consensus 377 ------------~~~g~lIlS~~~G~~~~l~~g~lVnP~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~ 444 (456)
T d1uqta_ 377 ------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQE 444 (456)
T ss_dssp ------------TSCCEEEEETTBGGGGTCTTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred ------------CCCCcEEEeCCCCCHHHhCCeEEECcCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHHHHH
Confidence 25689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 003999 539 SFAQDLERA 547 (780)
Q Consensus 539 ~~l~~l~~~ 547 (780)
+||.+|+++
T Consensus 445 ~fl~~l~~~ 453 (456)
T d1uqta_ 445 CFISDLKQI 453 (456)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhh
Confidence 999999874
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.91 E-value=4.3e-23 Score=232.50 Aligned_cols=319 Identities=16% Similarity=0.153 Sum_probs=210.9
Q ss_pred HhHHHHHHHHHHHHHHHHHHcCC-CCCEEEEeCCccchHHHHHHH-hcCCCcEEEEEeCCCC----ChhHhhcCC--C--
Q 003999 175 VLWQAYVSANKIFADKVMEVINP-DDDCVWVHDYHLMVLPTFLRK-RFNRIKLGFFLHSPFP----SSEIYRTLP--V-- 244 (780)
Q Consensus 175 ~~w~~Y~~vN~~fA~~v~~~~~~-~~DiVwvhDyhl~llp~~lr~-~~~~~~i~~flH~PfP----~~e~~~~lp--~-- 244 (780)
..|..|...++.+++.+.+.... .-|+||+||+|..+.+.+++. +.+++++++++|.... ....+..+. +
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~ 185 (477)
T d1rzua_ 106 DNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHA 185 (477)
T ss_dssp THHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGG
T ss_pred ccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHhhCCCCCEEEEEecccccccCCHHHHHHhhcchhh
Confidence 35888888888887665544321 129999999999999888864 4578999999996521 112221111 0
Q ss_pred -----------hHHHHHhhhcCCEEEeecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhh
Q 003999 245 -----------RDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLES 313 (780)
Q Consensus 245 -----------r~eil~~ll~~Dligf~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~ 313 (780)
..-+-.++..+|.+-..+..|++..+..-. ..+.+.. ...+..++.++|+|||.+.|.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~vi~ngv~~~~~~p 255 (477)
T d1rzua_ 186 FGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEF-GMGLEGV---------IGSRAHVLHGIVNGIDADVWNP 255 (477)
T ss_dssp SSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHH-HTTCHHH---------HHTTGGGEEECCCCBCTTTSCT
T ss_pred cccccccccchhHHHHHHHHhhhhhhhccHHHHHHHHHHhc-Ccchhhh---------hhhccccEEEEECCcchhhccc
Confidence 012234566799999999888876653210 0111100 0112235788999999988764
Q ss_pred hcCC-----------chhHHHHHHHHHHc----CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcC
Q 003999 314 VLNL-----------PATATKIKEIEKQF----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNP 378 (780)
Q Consensus 314 ~~~~-----------~~~~~~~~~lr~~~----~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p 378 (780)
.... .......+.++.++ +++++|+++||+++.||++.+++|++++++.++. |+.+|.
T Consensus 256 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~------l~~~G~- 328 (477)
T d1rzua_ 256 ATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGR------LVVLGA- 328 (477)
T ss_dssp TTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCE------EEEEEC-
T ss_pred cccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCe------EEEEec-
Confidence 2110 01122233444444 3568999999999999999999999999886433 555553
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCC
Q 003999 379 ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458 (780)
Q Consensus 379 ~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~ 458 (780)
|+. ....++.++..+.+. .|.+. +..+.+++..+|+.||+||+||.+||||+|++||||||
T Consensus 329 ----G~~--~~~~~~~~~~~~~~~--------~v~~~-~~~~~~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G---- 389 (477)
T d1rzua_ 329 ----GDV--ALEGALLAAASRHHG--------RVGVA-IGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG---- 389 (477)
T ss_dssp ----BCH--HHHHHHHHHHHHTTT--------TEEEE-ESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----
T ss_pred ----CCc--hHHHHHHHHHhhcCC--------eEEEE-cccChhHHHHHHHhCccccCCccccCCCHHHHHHHHcC----
Confidence 221 122334444444332 25544 45688889999999999999999999999999999997
Q ss_pred ccccccccCCCCCCCceEEEcCCCCccccCC------------CcEEECCCCHHHHHHHHHHHHcCC--HHHHHHHHHHH
Q 003999 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSLS------------GAIRVNPWDIDAVADAMTLAINMR--DSEKQLRHEKH 524 (780)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------------~al~VnP~d~~~~A~ai~~aL~m~--~~er~~r~~~~ 524 (780)
.|+|+|..+|.++.+. .|++|+|.|++++|+||.++|+.. ++.++++.++.
T Consensus 390 ---------------~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~a 454 (477)
T d1rzua_ 390 ---------------CIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLG 454 (477)
T ss_dssp ---------------CEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred ---------------CCEEEcCCCCCcceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCCHHHHHHHHHHH
Confidence 5999999999998772 479999999999999999998732 22222222222
Q ss_pred hhHhhhCCHHHHHHHHHHHHHH
Q 003999 525 YRYVSTHDVAYWARSFAQDLER 546 (780)
Q Consensus 525 ~~~V~~~~~~~Wa~~~l~~l~~ 546 (780)
. -+.++|..-++++++-.++
T Consensus 455 ~--~~~fsw~~~a~~~~~lY~~ 474 (477)
T d1rzua_ 455 M--KSDVSWEKSAGLYAALYSQ 474 (477)
T ss_dssp H--TCCCBHHHHHHHHHHHHHH
T ss_pred H--HhhCCHHHHHHHHHHHHHH
Confidence 1 1347777777776654443
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.91 E-value=8.3e-23 Score=225.03 Aligned_cols=290 Identities=18% Similarity=0.172 Sum_probs=211.2
Q ss_pred CCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCCh---hHhhc------CC--ChHHHHHhhhcCCEEEeecHHHHH
Q 003999 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS---EIYRT------LP--VRDEILRGLLNCDLIGFHTFDYAR 267 (780)
Q Consensus 199 ~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~~~~------lp--~r~eil~~ll~~Dligf~t~~y~~ 267 (780)
.|+||+|+++..+++.++++. .++++.+++|..++.. ..+.. .. ...........+|.+...+..++.
T Consensus 121 pDiIh~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~ 199 (437)
T d2bisa1 121 PDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLI 199 (437)
T ss_dssp CSEEEEETGGGHHHHHHHHHH-HCCCEEEEESSCCCCCEEHHHHHHTTCGGGCCSSEECHHHHHHHHSSEEEESCHHHHH
T ss_pred CCEEEECChhhhhHhhhhhcc-ccCceeEEEeeccccccchhhhhhccchhhhhHHHHHHHHHHHHhhhhhcccchhhhh
Confidence 389999999988887777765 5789999999887632 11111 11 111223345568888887776554
Q ss_pred HHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc--CCCeEEEEeccccc
Q 003999 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMDI 345 (780)
Q Consensus 268 ~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~--~~~~vil~Vdrld~ 345 (780)
.... .++. ...++.++|+|+|++.|.+....+........+++++ .++++|+++||++.
T Consensus 200 ~~~~----~~~~---------------~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~ 260 (437)
T d2bisa1 200 DEWG----FFRN---------------FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDR 260 (437)
T ss_dssp HTHH----HHGG---------------GTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCCSCEEEEEESCBCS
T ss_pred hhhh----hhcc---------------ccCceEEEecccccccccccccchhhHHHHHhhhhhhhccCCceEEEeecccc
Confidence 3322 1111 0124678999999999877655444445556677777 46789999999974
Q ss_pred -cCChHHHHHHHHHHHHh--CCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHH
Q 003999 346 -FKGISLKLLAMEQLLQQ--HPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRF 422 (780)
Q Consensus 346 -~KGi~~~l~A~~~ll~~--~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~ 422 (780)
.||+..+++|++.+..+ +|+++ |+.+|.. .+.++ ..++.+. ...+ .+.++.+.++.+
T Consensus 261 ~~Kg~~~ll~a~~~~~~~~~~~~~~----lvi~G~~----~~~~~---~~~~~~~----~~~~-----~~~~~~~~~~~~ 320 (437)
T d2bisa1 261 GQKGVDVLLKAIEILSSKKEFQEMR----FIIIGKG----DPELE---GWARSLE----EKHG-----NVKVITEMLSRE 320 (437)
T ss_dssp SSSCHHHHHHHHHHHTTSGGGGGEE----EEEECCB----CHHHH---HHHHHHH----HTCT-----TEEEECSCCCHH
T ss_pred cchhHHHHHhhhcccccccccccce----eeeeccc----ccccc---cchhhhc----cccc-----cceeccccCcHH
Confidence 79999999999998653 35544 8877631 12222 2222222 1222 255677889999
Q ss_pred HHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccCC--CcEEECCCCHH
Q 003999 423 EKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNPWDID 500 (780)
Q Consensus 423 el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~ 500 (780)
++..+|+.||++++||..||+|++++|||+|| .|+|+|..+|..+.+. .|++|+|.|++
T Consensus 321 ~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G-------------------~Pvi~~~~g~~~e~i~~~~G~~~~~~d~~ 381 (437)
T d2bisa1 321 FVRELYGSVDFVIIPSYFEPFGLVALEAMCLG-------------------AIPIASAVGGLRDIITNETGILVKAGDPG 381 (437)
T ss_dssp HHHHHHTTCSEEEECCSCCSSCHHHHHHHTTT-------------------CEEEEESCTTHHHHCCTTTCEEECTTCHH
T ss_pred HHHHHHhhhccccccccccccchHHHHHHHCC-------------------CCEEEeCCCCcHHhEECCcEEEECCCCHH
Confidence 99999999999999999999999999999997 4899999988887773 48999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHHHHHHHHHH
Q 003999 501 AVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (780)
Q Consensus 501 ~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~~l~~l~~~ 547 (780)
++|++|.++|++.++.++...+..+++++++|+..+++++++-.+++
T Consensus 382 ~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~a~~~~~iY~~~ 428 (437)
T d2bisa1 382 ELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGS 428 (437)
T ss_dssp HHHHHHHHHHTTTTSCTHHHHHHHHHHHHHSCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99999999998766556666677888888899999999988765543
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.84 E-value=2e-20 Score=185.43 Aligned_cols=188 Identities=16% Similarity=0.177 Sum_probs=146.0
Q ss_pred CCCchhhhhhcCCchhHHHHHHHHHHc--CCCeEEEEecccc-ccCChHHHHHHHHHHHHh--CCCCCCceEEEEEEcCC
Q 003999 305 GVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMD-IFKGISLKLLAMEQLLQQ--HPGMRGKVVLVQIVNPA 379 (780)
Q Consensus 305 GId~~~~~~~~~~~~~~~~~~~lr~~~--~~~~vil~Vdrld-~~KGi~~~l~A~~~ll~~--~P~~~~~vvLvqi~~p~ 379 (780)
|||.+.|.+........++...++++| +++++|++|||++ +.||+..+++|++.+.++ +|+ +.|+.+|..
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~----~~l~i~G~g- 75 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKG- 75 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG----EEEEEECCB-
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCCCCCEEEEEcCCCccccCHHHHHHHHHhhhcccCCCC----eEEEEEeec-
Confidence 899999987655555667778888998 6889999999997 589999999999998654 344 558877631
Q ss_pred CCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCc
Q 003999 380 RGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPI 459 (780)
Q Consensus 380 r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~ 459 (780)
.+.++. .++.+... ++ .++++.+.++.+++..+|+.||++|+||..||||++.+|||+||
T Consensus 76 ---~~~~~~---~~~~~~~~----~~-----~~~~~~~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G----- 135 (196)
T d2bfwa1 76 ---DPELEG---WARSLEEK----HG-----NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----- 135 (196)
T ss_dssp ---CHHHHH---HHHHHHHH----CT-----TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT-----
T ss_pred ---ccchhh---hhhhhhhc----cc-----eeEEeeeccccccchhccccccccccccccccccccchhhhhcC-----
Confidence 133332 33333322 22 25667888999999999999999999999999999999999997
Q ss_pred cccccccCCCCCCCceEEEcCCCCccccCC--CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhC
Q 003999 460 MDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTH 531 (780)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~al~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~ 531 (780)
.|+|+|..+|..+.+. .|++++|.|+++++++|.++|.+..+.+....+..++++.++
T Consensus 136 --------------~pvI~~~~~~~~e~i~~~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~f 195 (196)
T d2bfwa1 136 --------------AIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 195 (196)
T ss_dssp --------------CEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred --------------ceeeecCCCccceeecCCceeeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 4899999888877774 489999999999999999999987655554444466665443
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=1e-19 Score=193.86 Aligned_cols=201 Identities=16% Similarity=0.182 Sum_probs=152.0
Q ss_pred EEEEeecCCCchhhhhhcCCchhHHHHHHHHHHc---CCCeEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEE
Q 003999 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (780)
Q Consensus 298 ~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~~---~~~~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvq 374 (780)
++.++|+|||++.+..... +. ....+|+.+ .+++++++++|+.+.||+..+++|++++.+++|+.. ++.
T Consensus 160 ~i~vi~~gv~~~~~~~~~~-~~---~~~~~r~~~~~~~~~~~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~----~~i 231 (370)
T d2iw1a1 160 RFQILPPGIYPDRKYSEQI-PN---SREIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNT----LLF 231 (370)
T ss_dssp GEEECCCCCCGGGSGGGSC-TT---HHHHHHHHTTCCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTE----EEE
T ss_pred eEEEEEeecccccccccCc-hh---hhhhhhhccCCCccceEEEEEeccccccchhhhcccccccccccccce----eee
Confidence 4678999999987765322 22 224455655 478999999999999999999999999988877654 554
Q ss_pred EEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcc
Q 003999 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (780)
Q Consensus 375 i~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~ 454 (780)
++... .+ .++++++++++.. ..|+++ ++ .+++..+|+.||++|+||..|||+++++|||+||
T Consensus 232 i~g~~---~~------~~~~~~~~~~~~~------~~v~~~-g~--~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G 293 (370)
T d2iw1a1 232 VVGQD---KP------RKFEALAEKLGVR------SNVHFF-SG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG 293 (370)
T ss_dssp EESSS---CC------HHHHHHHHHHTCG------GGEEEE-SC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT
T ss_pred ccccc---cc------ccccccccccccc------cccccc-cc--ccccccccccccccccccccccccceeeecccCC
Confidence 55322 11 2334555555432 136655 33 4689999999999999999999999999999997
Q ss_pred cCCCccccccccCCCCCCCceEEEcCCCCccccCC---Cc-EEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhh
Q 003999 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GA-IRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (780)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~a-l~VnP~d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~ 530 (780)
.|+|+|..+|.++.+. .| ++++|.|++++|++|.++|++++ .++...++.++++++
T Consensus 294 -------------------~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~~-~~~~~~~~ar~~~~~ 353 (370)
T d2iw1a1 294 -------------------LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSP-LRMAWAENARHYADT 353 (370)
T ss_dssp -------------------CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHH
T ss_pred -------------------eeEEEeCCCChHHHhcCCCceEEEcCCCCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHH
Confidence 4899999999988772 35 45689999999999999999754 455556778999999
Q ss_pred CCHHHHHHHHHHHH
Q 003999 531 HDVAYWARSFAQDL 544 (780)
Q Consensus 531 ~~~~~Wa~~~l~~l 544 (780)
+++..|.+...+-+
T Consensus 354 ~~~~~~~~~~~~ii 367 (370)
T d2iw1a1 354 QDLYSLPEKAADII 367 (370)
T ss_dssp SCCSCHHHHHHHHH
T ss_pred hChhHHHHHHHHHH
Confidence 99999988655433
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.79 E-value=4.1e-19 Score=177.85 Aligned_cols=167 Identities=23% Similarity=0.237 Sum_probs=135.2
Q ss_pred eEEeCCCCCCCCCCC--CCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCccEEeeCCCCce
Q 003999 593 AIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEW 670 (780)
Q Consensus 593 lI~lD~DGTL~~~~~--~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~~ir~~~~~~w 670 (780)
|||||+||||+++.. ..+.++++++++|++|++ ++.|+|+|||+...+...+.. ..+++++||+.+..++.. +
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~--~~~v~i~TGR~~~~l~~~~~~--~~~~~~~ng~~~~~~~~~-~ 76 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKE--RFDTYIVTGRSPEEISRFLPL--DINMICYHGACSKINGQI-V 76 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHH--HSEEEEECSSCHHHHHHHSCS--SCEEEEGGGTEEEETTEE-E
T ss_pred EEEEEecCCCCCCCCChhhCCCCHHHHHHHHHHhh--CCCEEEEcCCCHHHhhhhcCc--cccEEecCeEEEecCCce-e
Confidence 899999999998642 456799999999999986 578999999999999887753 467999999999887543 3
Q ss_pred EecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEEEcCeEEE
Q 003999 671 ETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVE 750 (780)
Q Consensus 671 ~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~vE 750 (780)
.......+..|.+.+.+.+..+....+|...+.+...+.+++...++. ..++..+.++..+...++.+.+|..++|
T Consensus 77 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~id 152 (229)
T d1u02a_ 77 YNNGSDRFLGVFDRIYEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGAD----MKPKLRSRIEEIARIFGVETYYGKMIIE 152 (229)
T ss_dssp ECTTGGGGHHHHHHHHHHHTTHHHHSTTCEEEEETTEEEEECTTSCST----THHHHHHHHHHHHHHHTCEEEECSSEEE
T ss_pred eecchhhhHHHHHHHHHHhHHhhcccCCceecccccceeeeehhhhhh----hHHHHHHHHHHHhhcCCeEEEeeceEEE
Confidence 322233445677777777777888899999999999999999887554 3345566667777777788999999999
Q ss_pred EEeCCCCHHHHHHHHHHH
Q 003999 751 VKPQVLRPSSISVSLSLS 768 (780)
Q Consensus 751 I~p~gvsKG~al~~Ll~~ 768 (780)
|.|+|+|||.|+++|++.
T Consensus 153 i~p~g~~Kg~al~~l~~~ 170 (229)
T d1u02a_ 153 LRVPGVNKGSAIRSVRGE 170 (229)
T ss_dssp EECTTCCHHHHHHHHHTT
T ss_pred EecCCCCHHHHHHHHhcc
Confidence 999999999999999875
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=7.5e-16 Score=158.78 Aligned_cols=177 Identities=15% Similarity=0.132 Sum_probs=117.5
Q ss_pred CceEEeCCCCCCCCCCCCCCCC-CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSP-GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS 668 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~p-s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~ 668 (780)
.|+|++|+||||++ ..+.+ +++++++|++|++. |+.|+++|||++..+.+++..+. ..++|++||+++..++..
T Consensus 2 IKli~~DlDGTLl~---~~~~~~~~~~~~~l~~l~~~-gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (269)
T d1rlma_ 2 VKVIVTDMDGTFLN---DAKTYNQPRFMAQYQELKKR-GIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQ 77 (269)
T ss_dssp CCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHHH-TCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEE
T ss_pred EEEEEEeCCccCcC---CCCcCChHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcE
Confidence 58999999999998 44444 47899999999995 99999999999999999998764 458999999999987543
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhc---------CCCceeecccc------------e--EEEeeccCCCCc------
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEA---------TDGSNIEIKES------------A--LVWHHQDADPDF------ 719 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~---------t~gs~iE~k~~------------~--l~~hyr~ad~d~------ 719 (780)
.+... .. .+....++..+... .++.++..... . ....+...+...
T Consensus 78 ~~~~~---~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (269)
T d1rlma_ 78 LFHGE---LT---RHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLN 151 (269)
T ss_dssp EEECC---CC---HHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEE
T ss_pred EEEec---cc---hHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEec
Confidence 33221 11 12222333332221 12223222100 0 001111111111
Q ss_pred -ccccHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 720 -GSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 720 -~~~qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
...+.+++.+++...+......+.++..++||.|+++|||.|+++|++++|+++++|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~lgi~~~~vi 210 (269)
T d1rlma_ 152 LPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVV 210 (269)
T ss_dssp CCGGGHHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEE
T ss_pred CCHHHHHHHHHHHHHHhhcceEEEEEcCceEEEecCchHHHHHHHHHhhhhccccccEE
Confidence 1234556667766655544345667999999999999999999999999999987764
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.64 E-value=2.4e-15 Score=155.90 Aligned_cols=178 Identities=15% Similarity=0.127 Sum_probs=115.4
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~ 669 (780)
.|+|++|+||||++ .++.++++++++|++|++. |+.|+++|||++..+.+.+..+. ..++|++||+.+...++..
T Consensus 1 iKli~~DlDGTLl~---~~~~i~~~~~~~l~~l~~~-Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~~ 76 (285)
T d1nrwa_ 1 MKLIAIDLDGTLLN---SKHQVSLENENALRQAQRD-GIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRL 76 (285)
T ss_dssp CCEEEEECCCCCSC---TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCE
T ss_pred CeEEEEECCccccC---CCCccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHhCCCcEEEecCceeEEecCCce
Confidence 37999999999998 6678999999999999995 99999999999999999998764 4579999999999875554
Q ss_pred eEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEE---------------------------------------E
Q 003999 670 WETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALV---------------------------------------W 710 (780)
Q Consensus 670 w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~---------------------------------------~ 710 (780)
+.. ...+ ++.+.++++.+........+........ +
T Consensus 77 i~~--~~i~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (285)
T d1nrwa_ 77 YHH--ETID---KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGF 151 (285)
T ss_dssp EEE--CCCC---HHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCE
T ss_pred eee--ccCC---HHHHHHHHHHHHHcCCceEEecCceEEeccccHHHHHHHHHhhhhcCcccchhhhhhhhhhhhccccc
Confidence 443 2234 2334444444333211111111000000 0
Q ss_pred ee----cc---C-CCC-cc-----cccHHHHHHHHHHHhcCCCeEEE-EcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCc
Q 003999 711 HH----QD---A-DPD-FG-----SCQAKELLDHLESVLANEPAVVK-RGQHIVEVKPQVLRPSSISVSLSLSVCVRARA 775 (780)
Q Consensus 711 hy----r~---a-d~d-~~-----~~qa~el~~~L~~~l~~~~v~v~-~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~ 775 (780)
.+ .. . ++. +. ......+...+........+.+. ++..++||.|+++|||.|+++|++++|+++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ldi~~~~~~K~~ai~~l~~~~gi~~~~ 231 (285)
T d1nrwa_ 152 AYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEE 231 (285)
T ss_dssp EECSCGGGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHTTCCGGG
T ss_pred eeechHHHHhhcccchhheeeecccchHHHHHHHHHHhhcCCCeEEEEeCCcEEEEecccchhhhHHHHHHhhcccCccc
Confidence 00 00 0 000 00 00112222222222223346654 68999999999999999999999999999977
Q ss_pred cc
Q 003999 776 CK 777 (780)
Q Consensus 776 ~~ 777 (780)
|.
T Consensus 232 vi 233 (285)
T d1nrwa_ 232 TA 233 (285)
T ss_dssp EE
T ss_pred EE
Confidence 65
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.64 E-value=3.9e-16 Score=160.96 Aligned_cols=180 Identities=12% Similarity=0.130 Sum_probs=113.2
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC----CCceEEecCccEEeeC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC----EMLGIAAEHGYFIRWN 665 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l----~~lgliaenG~~ir~~ 665 (780)
..|||++|+||||++ .++.++++++++|++|++. |+.|+|+|||++..+.+++..+ |..+++++||+.+...
T Consensus 3 ~iKli~~DlDGTL~~---~~~~i~~~~~~al~~L~~~-gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~ 78 (271)
T d1rkqa_ 3 AIKLIAIDMDGTLLL---PDHTISPAVKNAIAAARAR-GVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKA 78 (271)
T ss_dssp CCCEEEECCCCCCSC---TTSCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEET
T ss_pred CeeEEEEeCCccccC---CCCccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEecc
Confidence 378999999999998 6678999999999999995 9999999999999999888764 3457999999999865
Q ss_pred CCCceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEE-------------------Eeecc---CCC--Ccc-
Q 003999 666 KTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALV-------------------WHHQD---ADP--DFG- 720 (780)
Q Consensus 666 ~~~~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~-------------------~hyr~---ad~--d~~- 720 (780)
.+...... ...+.+....+..+.+... ....+........ ..+.. .++ .+.
T Consensus 79 ~~~~~i~~-~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (271)
T d1rkqa_ 79 ADGSTVAQ-TALSYDDYRFLEKLSREVG---SHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLK 154 (271)
T ss_dssp TTCCEEEE-CCBCHHHHHHHHHHHHHHT---CEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCE
T ss_pred CCCeEEEe-ecccHHHHHHHHHHHHhhc---ceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEE
Confidence 44333221 2234333333333333221 1111111110000 00000 000 000
Q ss_pred ------cccHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 721 ------SCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 721 ------~~qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
....++....+.+.+.+.-..+..|..++||.|+++|||.|+++|+++++++.+++.
T Consensus 155 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii 217 (271)
T d1rkqa_ 155 VMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIM 217 (271)
T ss_dssp EEEECCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEE
T ss_pred EEEecCHHHHHHHHHHHHHHhhcceEEEEecCceEEecCCCCCcccccceehhhcccchhcEE
Confidence 011223333333333322123567899999999999999999999999999986653
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.64 E-value=1.3e-15 Score=157.40 Aligned_cols=176 Identities=13% Similarity=0.068 Sum_probs=116.1
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC--CCceEEecCccEEeeCCCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC--EMLGIAAEHGYFIRWNKTS 668 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l--~~lgliaenG~~ir~~~~~ 668 (780)
.|+|++|+||||++ .++.++++++++|++|++ ++.++++|||++..+.+.+..+ ...++|++||+.|..+++.
T Consensus 2 ~Kli~~DlDGTL~~---~~~~i~~~~~~al~~l~~--~~~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~ 76 (267)
T d1nf2a_ 2 YRVFVFDLDGTLLN---DNLEISEKDRRNIEKLSR--KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEG 76 (267)
T ss_dssp BCEEEEECCCCCSC---TTSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTE
T ss_pred eEEEEEeCCccccC---CcCccCHHHHHHHHHHHc--CCEEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEecccc
Confidence 47999999999998 667899999999999986 4689999999999888877653 2457999999999987654
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEe--------eccC------CCCcc--------------
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWH--------HQDA------DPDFG-------------- 720 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~h--------yr~a------d~d~~-------------- 720 (780)
.... ...+. +.+..+++...+......+...+.....+ .+.. .+.+.
T Consensus 77 ~i~~--~~i~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 151 (267)
T d1nf2a_ 77 VILN--EKIPP---EVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLI 151 (267)
T ss_dssp EEEE--CCBCH---HHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEE
T ss_pred cccc--cCCCH---HHHHHHHHHHHhcCceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHhhhccceEEEEe
Confidence 4332 23443 33445555444432121111111110000 0000 00000
Q ss_pred --cccHHHHHHHHHHHhcCCCeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 721 --SCQAKELLDHLESVLANEPAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 721 --~~qa~el~~~L~~~l~~~~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
..+.+++.+.+.+.+.+. +. +.++..++||.|+|+|||.|+++|+++++++++++.
T Consensus 152 ~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~~i~~~~vv 210 (267)
T d1nf2a_ 152 DTPERLDELKEILSERFKDV-VKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIV 210 (267)
T ss_dssp CCHHHHHHHHHHHHHHHTTT-SEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEE
T ss_pred ccHHHHHHHHHHHHHhhCCc-EEEEEeecceeeecCCCCchhHHHHHHHHhhccCcccEE
Confidence 113344555555554443 44 567899999999999999999999999999987764
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.63 E-value=1e-15 Score=147.07 Aligned_cols=139 Identities=17% Similarity=0.221 Sum_probs=109.4
Q ss_pred eEEEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 003999 335 KLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVL 414 (780)
Q Consensus 335 ~vil~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~ 414 (780)
..+|+|||+++.||+...++|++++ |+.+ |+.+|..+ .++..+.+.+++.+. +. ..|++
T Consensus 13 ~~~l~iGrl~~~K~~~~~i~a~~~l----~~~~----l~ivg~~~--~~~~~~~~~~~~~~~--------~~---~~v~~ 71 (166)
T d2f9fa1 13 DFWLSVNRIYPEKRIELQLEVFKKL----QDEK----LYIVGWFS--KGDHAERYARKIMKI--------AP---DNVKF 71 (166)
T ss_dssp SCEEEECCSSGGGTHHHHHHHHHHC----TTSC----EEEEBCCC--TTSTHHHHHHHHHHH--------SC---TTEEE
T ss_pred CEEEEEecCccccCHHHHHHHHHHh----cCCe----EEEEEecc--cccchhhhhhhhccc--------cc---CcEEE
Confidence 5688999999999999999999765 5555 66666433 233444444433322 11 13776
Q ss_pred ecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCccccC-C--Cc
Q 003999 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GA 491 (780)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~a 491 (780)
+ +.++.+++..+|+.||+++.||..||+|++.+|||+|| .|+|+|..+|+.+.+ + .|
T Consensus 72 ~-g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g-------------------~pvi~s~~~~~~e~i~~~~~g 131 (166)
T d2f9fa1 72 L-GSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG-------------------KPVIAVNEGGFKETVINEKTG 131 (166)
T ss_dssp E-ESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT-------------------CCEEEESSHHHHHHCCBTTTE
T ss_pred e-eccccccccccccccccccccccccccccccccccccc-------------------ccceeecCCcceeeecCCccc
Confidence 5 68999999999999999999999999999999999997 489999999998877 2 36
Q ss_pred EEECCCCHHHHHHHHHHHHcCCHH
Q 003999 492 IRVNPWDIDAVADAMTLAINMRDS 515 (780)
Q Consensus 492 l~VnP~d~~~~A~ai~~aL~m~~~ 515 (780)
+.+++ |+++++++|.+++++++.
T Consensus 132 ~~~~~-d~~~~~~~i~~l~~~~~~ 154 (166)
T d2f9fa1 132 YLVNA-DVNEIIDAMKKVSKNPDK 154 (166)
T ss_dssp EEECS-CHHHHHHHHHHHHHCTTT
T ss_pred ccCCC-CHHHHHHHHHHHHhCHHH
Confidence 76665 999999999999998753
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.58 E-value=3.5e-15 Score=153.35 Aligned_cols=175 Identities=14% Similarity=0.138 Sum_probs=108.4
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHh---ccCCCceEEecCccEEeeCCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWL---APCEMLGIAAEHGYFIRWNKT 667 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f---~~l~~lgliaenG~~ir~~~~ 667 (780)
.|+||||+||||++. ....++++++++|++|++. |+.|+++|||++..+...+ ......++|++||++++.+++
T Consensus 1 ~k~if~DlDGTL~~~--~~~~i~~~~~~al~~l~~~-gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~nGa~i~~~~~ 77 (260)
T d2rbka1 1 TKALFFDIDGTLVSF--ETHRIPSSTIEALEAAHAK-GLKIFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEE 77 (260)
T ss_dssp CCEEEECSBTTTBCT--TTSSCCHHHHHHHHHHHHT-TCEEEEECSSCGGGCCSCHHHHHTTCCCEEEEGGGTEEEETTE
T ss_pred CeEEEEECCCCCcCC--CCCCCCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHHHhcCCCCceEecCCcccccCcc
Confidence 379999999999973 2456899999999999995 9999999999988765433 222345799999999998764
Q ss_pred CceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEe-----------eccC--CCC--cc--------c---
Q 003999 668 SEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWH-----------HQDA--DPD--FG--------S--- 721 (780)
Q Consensus 668 ~~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~h-----------yr~a--d~d--~~--------~--- 721 (780)
..+.. ..+.+. +..+++...+......+-......... +... .+. +. .
T Consensus 78 ~i~~~---~l~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (260)
T d2rbka1 78 VIYKS---AIPQEE---VKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTP 151 (260)
T ss_dssp EEEEC---CCCHHH---HHHHHHHHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEE
T ss_pred ccccc---CCCHHH---HHHHHHHHHHcCCcEEEEecCceeeccchHHHHHHHHHhhccCcCcccCHhHhcCcceEEEee
Confidence 34443 234333 344444333322121111111111100 0000 000 00 0
Q ss_pred ccHHHHHHHHHHHhcCCC-eEEE-EcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 722 CQAKELLDHLESVLANEP-AVVK-RGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 722 ~qa~el~~~L~~~l~~~~-v~v~-~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
...++ ....+++..+ +.+. .+..++||.|+++|||.|+++|++++|++.++|.
T Consensus 152 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~ei~p~~~sK~~al~~l~~~~~i~~~~~~ 206 (260)
T d2rbka1 152 FITEE---EEKEVLPSIPTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETM 206 (260)
T ss_dssp CCCHH---HHHHHGGGSTTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEE
T ss_pred cCCHH---HHHHHHHHhccccceeecCcEEEEEeCCCCHHHHHHHHHHhccccHhhee
Confidence 00011 1223333332 4554 4788999999999999999999999999988764
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.56 E-value=7.5e-15 Score=146.56 Aligned_cols=171 Identities=16% Similarity=0.178 Sum_probs=113.6
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS 668 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~ 668 (780)
|.|+|+||+||||++ .+..++++++++|++|.+. |+.|+++|||+...+...+..+. +..++++||+.+......
T Consensus 1 kiK~i~~D~DGTL~~---~~~~i~~~~~~~l~~l~~~-gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~ 76 (230)
T d1wr8a_ 1 KIKAISIDIDGTITY---PNRMIHEKALEAIRRAESL-GIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76 (230)
T ss_dssp CCCEEEEESTTTTBC---TTSCBCHHHHHHHHHHHHT-TCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEE
T ss_pred CceEEEEecCCCCcC---CCCccCHHHHHHHHHHHhC-CCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccc
Confidence 568999999999998 6678999999999999985 99999999999999988776542 457999999999877543
Q ss_pred ceEecCCCcChhHHHHHHHHHHHHHhcCCCceeecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEEEcCeE
Q 003999 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHI 748 (780)
Q Consensus 669 ~w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~ 748 (780)
.+. ...+..|. ....+...+...........+...+.+. ... . .....+++.++ + ...+....+..+
T Consensus 77 ~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~-~~~~~~~~~~~----~-~~~~~~~~~~~~ 143 (230)
T d1wr8a_ 77 IFL---ASMDEEWI-LWNEIRKRFPNARTSYTMPDRRAGLVIM-RET--I-NVETVREIINE----L-NLNLVAVDSGFA 143 (230)
T ss_dssp EES---CCCSHHHH-HHHHHHHHCTTCCBCTTGGGCSSCEEEC-TTT--S-CHHHHHHHHHH----T-TCSCEEEECSSC
T ss_pred ccc---ccccHHHH-HHHHHHHhcccccceeecccceeeEEEe-ccc--c-cHHHHHHHHHH----h-ccceEEeeCCcE
Confidence 322 22232221 1222332332221111122233333322 211 1 10112222222 1 223567788899
Q ss_pred EEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 749 VEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 749 vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+||.|.+++|+.|++++++++++++.+|.
T Consensus 144 iei~~~~~~K~~al~~l~~~~~i~~~~~~ 172 (230)
T d1wr8a_ 144 IHVKKPWINKGSGIEKASEFLGIKPKEVA 172 (230)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTSCGGGEE
T ss_pred EEEeeCCcCcchhhcccccccccchhhee
Confidence 99999999999999999999999997764
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.55 E-value=1.6e-14 Score=148.99 Aligned_cols=186 Identities=13% Similarity=0.082 Sum_probs=122.6
Q ss_pred HHHHhccCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC-------CCceEEe
Q 003999 584 SAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC-------EMLGIAA 656 (780)
Q Consensus 584 ~~y~~a~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l-------~~lglia 656 (780)
++++.+..|+|++|+||||++. .+..++++++++|++|++. |+.|+|+|||++..+...+..+ .....|+
T Consensus 3 ~~~~~~~ikli~~DlDGTLl~~--~~~~i~~~~~~al~~l~~~-Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~ 79 (283)
T d2b30a1 3 EALKGADIKLLLIDFDGTLFVD--KDIKVPSENIDAIKEAIEK-GYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVY 79 (283)
T ss_dssp HHTTTCCCCEEEEETBTTTBCC--TTTCSCHHHHHHHHHHHHH-TCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEE
T ss_pred ccCcccCccEEEEECCCCCcCC--CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhCcccccccCCceEE
Confidence 5778889999999999999852 3467999999999999985 9999999999999998887653 1345789
Q ss_pred cCccEEeeCCCCceEecCCCcChhHHHHHHHHHHHHHhcCC--CceeecccceEE---------------------Eeec
Q 003999 657 EHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATD--GSNIEIKESALV---------------------WHHQ 713 (780)
Q Consensus 657 enG~~ir~~~~~~w~~~~~~~d~~wk~~v~~i~~~~~e~t~--gs~iE~k~~~l~---------------------~hyr 713 (780)
.||+.++...+..... ...+..+ +..+++.+..... ..++...+.... ....
T Consensus 80 ~~g~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (283)
T d2b30a1 80 INGTIVYDQIGYTLLD--ETIETDV---YAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHN 154 (283)
T ss_dssp GGGTEEECTTCCEEEE--CCCCHHH---HHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHH
T ss_pred EeeeEEEcCCCcEeee--cccCHHH---HHHHHHHHHhhcccceEEEEecceeEEeccchHHHHHHHHhhccccccccHH
Confidence 9999998765544332 2334322 3334433322111 111111111110 0000
Q ss_pred cC--CCCc-------ccccHHHHHHHHHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 714 DA--DPDF-------GSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 714 ~a--d~d~-------~~~qa~el~~~L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+. +... ...+.+++...+.+.+......+.++..++||.|+++|||.|++.|++.++++.+++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~~~i~~~~vi 227 (283)
T d2b30a1 155 EMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVL 227 (283)
T ss_dssp HHTTCCCCSEEEECCCTTTHHHHHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEE
T ss_pred HHhhcccceEEEEecCHHHHHHHHHHHHHHhcccceEEEecceeEeecCCcchhHHHHHHHhhhcccccceEE
Confidence 00 0000 0123456667776666544334567899999999999999999999999999997654
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.52 E-value=3.4e-14 Score=142.60 Aligned_cols=167 Identities=12% Similarity=-0.005 Sum_probs=112.4
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCCc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~~ 669 (780)
.|+|+||+||||++ ....++++++++|++|.+. |+.|+++|||+...+......++ ...++++||+.+..+....
T Consensus 3 iKli~~D~DGTL~~---~~~~i~~~~~~al~~l~~~-g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~ 78 (225)
T d1l6ra_ 3 IRLAAIDVDGNLTD---RDRLISTKAIESIRSAEKK-GLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSI 78 (225)
T ss_dssp CCEEEEEHHHHSBC---TTSCBCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCE
T ss_pred eEEEEEecCCCCcC---CCCcCCHHHHHHHHHHHHC-CCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccE
Confidence 58999999999998 6678899999999999995 99999999999988777655432 4568999999988776544
Q ss_pred eEecCCCcChhHHHHHHHHHHHHHhcCCCceeeccc-ceEEEeeccCCCCcccccHHHHHHHHHHHhcCCCeEEEEcCeE
Q 003999 670 WETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKE-SALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHI 748 (780)
Q Consensus 670 w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~-~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~~v~v~~g~~~ 748 (780)
+.. .. . +.....++.+.....-..+.... ....+.+. .++ .+ .+.+...+...++.+..+...
T Consensus 79 ~~~-~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~----~~~~~~~~~~~~~~i~~~~~~ 142 (225)
T d1l6ra_ 79 KKF-FS--N----EGTNKFLEEMSKRTSMRSILTNRWREASTGFD-IDP----ED----VDYVRKEAESRGFVIFYSGYS 142 (225)
T ss_dssp EES-SC--S----HHHHHHHHHHTTTSSCBCCGGGGGCSSSEEEB-CCG----GG----HHHHHHHHHTTTEEEEEETTE
T ss_pred EEe-cC--h----HHHHHHHHHHHHhcCcceeecccceeeeeccc-cCH----HH----HHHHHHHHhhcCcEEEECCcE
Confidence 432 11 1 22333443333322111111110 00011111 111 12 233333344556788889999
Q ss_pred EEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 749 VEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 749 vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
+||.|+++|||.|+++|++.+++++.+|.
T Consensus 143 ~~i~~~~~~K~~ai~~l~~~~~i~~~~v~ 171 (225)
T d1l6ra_ 143 WHLMNRGEDKAFAVNKLKEMYSLEYDEIL 171 (225)
T ss_dssp EEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred EEecCCccchHHHHHHHhhhhccchhhee
Confidence 99999999999999999999999997653
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.50 E-value=1.6e-14 Score=146.76 Aligned_cols=169 Identities=14% Similarity=0.139 Sum_probs=106.9
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC---CceEEecCccEEeeCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE---MLGIAAEHGYFIRWNK 666 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~---~lgliaenG~~ir~~~ 666 (780)
++.||++|+||||++ .++.| +.++.+.++.+ .|+.|+|+|||++..+.+++..+. ..++|++||+.+....
T Consensus 2 ~~~li~~DlDGTL~~---~~~~~--~~~~~~~~~~~-~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~ 75 (244)
T d1s2oa1 2 RQLLLISDLDNTWVG---DQQAL--EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPE 75 (244)
T ss_dssp CSEEEEECTBTTTBS---CHHHH--HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETT
T ss_pred CceEEEEECcccCCC---CCCCH--HHHHHHHHHHc-CCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEcc
Confidence 456899999999998 33222 44556666666 489999999999999999887542 2358999999998775
Q ss_pred CCc--eEecCCCcChhHHHHHHHHHHHHHhcCCCcee----ecccceEEEeeccCCCCcccccHHHHHHHHHHHhcCC--
Q 003999 667 TSE--WETNHLGADLEWKKIVEPVMRSYTEATDGSNI----EIKESALVWHHQDADPDFGSCQAKELLDHLESVLANE-- 738 (780)
Q Consensus 667 ~~~--w~~~~~~~d~~wk~~v~~i~~~~~e~t~gs~i----E~k~~~l~~hyr~ad~d~~~~qa~el~~~L~~~l~~~-- 738 (780)
... |... .+..|. ..++..+.+..++... +.....+.+++...+.+ +..+.+...+...
T Consensus 76 ~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 142 (244)
T d1s2oa1 76 GLDQHWADY---LSEHWQ---RDILQAIADGFEALKPQSPLEQNPWKISYHLDPQACP-------TVIDQLTEMLKETGI 142 (244)
T ss_dssp EECHHHHHH---HHTTCC---HHHHHHHHHTCTTEEECCGGGCBTTBEEEEECTTSCT-------HHHHHHHHHHHTSSC
T ss_pred CcchHHHHH---HHHHHh---HHHHHHHHhhcccccccChhhhcceEEEEeccccccH-------HHHHHHHHHHHhhcc
Confidence 321 1110 001111 1222233333333332 22334455555433221 2333444433332
Q ss_pred CeE-EEEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 739 PAV-VKRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 739 ~v~-v~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
.+. ...+..++||.|++++||.|+++|++.+|++.++|+
T Consensus 143 ~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~v 182 (244)
T d1s2oa1 143 PVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQTL 182 (244)
T ss_dssp CEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred cceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhEE
Confidence 233 557889999999999999999999999999987763
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.41 E-value=1.7e-13 Score=136.40 Aligned_cols=180 Identities=13% Similarity=0.040 Sum_probs=105.7
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC--CceEEecCccEEeeCCCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE--MLGIAAEHGYFIRWNKTS 668 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~--~lgliaenG~~ir~~~~~ 668 (780)
..|||+|+||||++ .++.++++++++|++|++. |+.|+++|||+...+.+.+..+. ..++|++||+.+......
T Consensus 4 ~~li~~DlDGTLl~---~~~~i~~~~~~al~~l~~~-Gi~~~i~TGR~~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 79 (232)
T d1xvia_ 4 PLLVFSDLDGTLLD---SHSYDWQPAAPWLTRLREA-NVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQW 79 (232)
T ss_dssp CEEEEEECTTTTSC---SSCCSCCTTHHHHHHHHHT-TCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTC
T ss_pred CEEEEEECCCCccC---CcCcCCHHHHHHHHHHHHC-CCEEEEEeCCChhhchhHHHHhccCCceEEccCCeEEEecCCc
Confidence 45899999999998 5667888999999999984 99999999999999999988753 467999999999866432
Q ss_pred ceEe----cCCCcChhHHHHHHHHHHHHHhcCCCceeeccc---ceEEEee----------ccCC-CCcccccHHHHHHH
Q 003999 669 EWET----NHLGADLEWKKIVEPVMRSYTEATDGSNIEIKE---SALVWHH----------QDAD-PDFGSCQAKELLDH 730 (780)
Q Consensus 669 ~w~~----~~~~~d~~wk~~v~~i~~~~~e~t~gs~iE~k~---~~l~~hy----------r~ad-~d~~~~qa~el~~~ 730 (780)
.... ........+............ ........... .....++ +... +.... ...+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 157 (232)
T d1xvia_ 80 QEIDGFPRIISGISHGEISLVLNTLREKE-HFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWR-DSDERMAQ 157 (232)
T ss_dssp TTSTTTTEEECSSCHHHHHHHHHHHHHHH-CCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEEC-SCHHHHHH
T ss_pred cccchhhhhhhHHHHHHHHHhhhhhhhhh-ccccccccchhhhhhhhhhcccchhhhhhhhcceeeeeccc-ccHHHHHH
Confidence 2110 001112111111111111100 00000000000 0000000 0000 00000 01122233
Q ss_pred HHHHhcCCCeEEEEcCeEEEEEeCCCCHHHHHHHHHHH---cCCCCCcc
Q 003999 731 LESVLANEPAVVKRGQHIVEVKPQVLRPSSISVSLSLS---VCVRARAC 776 (780)
Q Consensus 731 L~~~l~~~~v~v~~g~~~vEI~p~gvsKG~al~~Ll~~---l~i~~~~~ 776 (780)
+..........+..+..++|+.|++++||.|+++|++. +|+++.+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~l~~~~~~l~i~~~~~ 206 (232)
T d1xvia_ 158 FTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTT 206 (232)
T ss_dssp HHHHHHHTTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEE
T ss_pred HHHHhhhccceeeeccceeeccCCCchHHHHHHHHHHHHHHcCCChhcE
Confidence 33333344566777888999999999999999999985 58888765
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=1e-12 Score=131.40 Aligned_cols=179 Identities=13% Similarity=0.054 Sum_probs=101.7
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC---CCceEEecCccEEeeCC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC---EMLGIAAEHGYFIRWNK 666 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l---~~lgliaenG~~ir~~~ 666 (780)
+.||++||+||||++ .++.++++++++|++|++ +..++++|||+...+...+... ...++++.||.++...+
T Consensus 2 ~~kl~~fDlDGTLl~---~~~~i~~~~~~al~~l~~--~g~~~i~Tgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T d2amya1 2 GPALCLFDVDGTLTA---PRQKITKEMDDFLQKLRQ--KIKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDG 76 (243)
T ss_dssp CSEEEEEESBTTTBC---TTSCCCHHHHHHHHHHTT--TSEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETT
T ss_pred CCEEEEEcCcCCeeC---CCCcCCHHHHHHHHHHHc--CCCEEEEcCCChHHhHHHHhhhccccceEEecCcEEEEecCC
Confidence 468999999999998 678899999999999987 3468899999998888777653 13455566777666654
Q ss_pred CCceEecCCC-cChh-HHHHHHHHHHHHHhcCCC----ceeecccceEEEeeccCCCCccc-----------ccHHHHHH
Q 003999 667 TSEWETNHLG-ADLE-WKKIVEPVMRSYTEATDG----SNIEIKESALVWHHQDADPDFGS-----------CQAKELLD 729 (780)
Q Consensus 667 ~~~w~~~~~~-~d~~-wk~~v~~i~~~~~e~t~g----s~iE~k~~~l~~hyr~ad~d~~~-----------~qa~el~~ 729 (780)
+..+...... .... +..........+...... ...+.......+........... ....+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (243)
T d2amya1 77 KLLCRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNGMLNVSPIGRSCSQEERIEFYELDKKENIRQKFVA 156 (243)
T ss_dssp EEEEECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETTEEEECSSCTTCCHHHHHHHHHHHHHHCHHHHHHH
T ss_pred ccceecchhHHHHHHHHHHHHhhhhhhheeccccccccchhhhhhhhhcccccccccchhhhhhhhhhhcchhhhHHHHH
Confidence 4333321110 0000 000011111111111111 11111122222222221111100 11233444
Q ss_pred HHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCcc
Q 003999 730 HLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARAC 776 (780)
Q Consensus 730 ~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~ 776 (780)
.+........+.+ .++..++||.|+|+|||.|+++|+ +++.+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~l~---~~~~~ev 201 (243)
T d2amya1 157 DLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVE---NDGYKTI 201 (243)
T ss_dssp HHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTT---TSCCSEE
T ss_pred HHHHHhcccceEEEecCCccceeeccccCHHHHHHHHh---CCCcceE
Confidence 5555554555654 568899999999999999999985 5666554
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.34 E-value=3.7e-13 Score=135.34 Aligned_cols=72 Identities=22% Similarity=0.220 Sum_probs=61.2
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC-CceEEecCccEEeeCCCC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTS 668 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~-~lgliaenG~~ir~~~~~ 668 (780)
.|+||+|+||||++ ... +++++++|++|++. |+.|+++|||++..+..++..++ ..++|++||+.+...++.
T Consensus 2 iKli~~DlDGTLl~---~~~--~~~~~~ai~~l~~~-G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 74 (243)
T d1wzca1 2 IRLIFLDIDKTLIP---GYE--PDPAKPIIEELKDM-GFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGY 74 (243)
T ss_dssp EEEEEECCBTTTBS---SSC--SGGGHHHHHHHHHT-TEEEEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEECTTC
T ss_pred cEEEEEeCCCCCCC---CCC--CHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhcccccccccCCcEEEcCCCc
Confidence 48999999999997 222 46789999999995 99999999999999999998764 457999999999887643
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=3.1e-12 Score=127.39 Aligned_cols=176 Identities=17% Similarity=0.140 Sum_probs=96.1
Q ss_pred ceEE-eCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc-CC----CceEEecCccEEeeC
Q 003999 592 RAIF-LDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP-CE----MLGIAAEHGYFIRWN 665 (780)
Q Consensus 592 rlI~-lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~-l~----~lgliaenG~~ir~~ 665 (780)
|+|+ ||+||||++ .+++++++++++|++|++. |+ ++++|||........+.. ++ ..++++.||.++...
T Consensus 1 k~i~lFDlDGTLl~---~~~~is~~~~~~i~~l~~~-g~-~~i~tgrr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 75 (244)
T d2fuea1 1 RVLCLFDVDGTLTP---ARQKIDPEVAAFLQKLRSR-VQ-IGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKH 75 (244)
T ss_dssp CEEEEEESBTTTBS---TTSCCCHHHHHHHHHHTTT-SE-EEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEET
T ss_pred CEEEEEccccCccC---CCCcCCHHHHHHHHHHHhC-CC-EEEEecCChhhhhhhhhhhhccccccceeecccceeeccC
Confidence 4556 599999999 6778999999999999884 64 667777776665555443 32 357899999999887
Q ss_pred CCCceEecCCCcChhHHHHHHHHHH----HHHhcCCC----ceeecccceEEEeeccCCCCccc-----------ccHHH
Q 003999 666 KTSEWETNHLGADLEWKKIVEPVMR----SYTEATDG----SNIEIKESALVWHHQDADPDFGS-----------CQAKE 726 (780)
Q Consensus 666 ~~~~w~~~~~~~d~~wk~~v~~i~~----~~~e~t~g----s~iE~k~~~l~~hyr~ad~d~~~-----------~qa~e 726 (780)
++..|..... ............. ........ .+.........++.......... ....+
T Consensus 76 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (244)
T d2fuea1 76 GRLLSKQTIQ--NHLGEELLQDLINFCLSYMALLRLPKKRGTFIEFRNGMLNISPIGRSCTLEERIEFSELDKKEKIREK 153 (244)
T ss_dssp TEECCCCCHH--HHHCHHHHHHHHHHHHHHHHTCCCSCCCSCSEEECSSCEEECSSCTTCCHHHHHHHHHHHHHHCHHHH
T ss_pred Cccceeechh--HHHhhhHHHHHHhhhhhhhheecccccccchhhhhhhhhhccccccccchhhhhhhhhhccchhhHHH
Confidence 6444432110 0000111111111 11111111 11111112222222221111100 01112
Q ss_pred HHHHHHHHhcCCCeEE-EEcCeEEEEEeCCCCHHHHHHHHHHHcCCCCCccc
Q 003999 727 LLDHLESVLANEPAVV-KRGQHIVEVKPQVLRPSSISVSLSLSVCVRARACK 777 (780)
Q Consensus 727 l~~~L~~~l~~~~v~v-~~g~~~vEI~p~gvsKG~al~~Ll~~l~i~~~~~~ 777 (780)
....+........+.+ .++..++||.|+|+|||.|+++|++ ++.++|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~L~~---~~~~ev~ 202 (244)
T d2fuea1 154 FVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQ---DSFDTIH 202 (244)
T ss_dssp HHHHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHHTT---SCCSEEE
T ss_pred HHHHHHHHhhccceeEeeccCccceecchhccHHHHHHHHhc---CChhhEE
Confidence 2223333333334444 4688999999999999999999985 3555543
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.53 E-value=2.7e-05 Score=71.08 Aligned_cols=52 Identities=23% Similarity=0.339 Sum_probs=42.7
Q ss_pred HhccCceEEeCCCCCCCCCCCC---------CCCCCHHHHHHHHHhccCCCCEEEEEcCCCh
Q 003999 587 RKTERRAIFLDYDGTVVPETSI---------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGR 639 (780)
Q Consensus 587 ~~a~~rlI~lD~DGTL~~~~~~---------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~ 639 (780)
..++.++|+||+||||+..... ...|-+.++++|+.|.+. |..|+++|||+.
T Consensus 3 ~~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~~-G~~Iii~T~R~~ 63 (149)
T d1ltqa1 3 TPGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALM-GYQIVVVSGRES 63 (149)
T ss_dssp CTTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHT-TCEEEEEECSCC
T ss_pred CCCCCcEEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHHHhc-cCeEEEEecCcH
Confidence 4577899999999999864321 235779999999999994 999999999973
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.17 E-value=0.00028 Score=62.55 Aligned_cols=46 Identities=22% Similarity=0.336 Sum_probs=38.8
Q ss_pred ceEEeCCCCCCCCCCC---CCCCCCHHHHHHHHHhccCCCCEEEEEcCCC
Q 003999 592 RAIFLDYDGTVVPETS---IIKSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~---~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~ 638 (780)
+-|++|+||||..... ....|-+.+++.|+.|.+. |++++|.|+|+
T Consensus 2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~~-G~~Iii~TaR~ 50 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQL-GFEIVISTARN 50 (124)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHT-TCEEEEEECTT
T ss_pred CEEEEeCCCCeECCCCCCcCccCcCHHHHHHHHHHHHC-CCEEEEEecCC
Confidence 4589999999987542 2356889999999999995 99999999996
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.12 E-value=0.00018 Score=63.74 Aligned_cols=55 Identities=29% Similarity=0.414 Sum_probs=43.2
Q ss_pred eEEeCCCCCCCCCCC-CCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhH---HHHhcc
Q 003999 593 AIFLDYDGTVVPETS-IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSL---SEWLAP 648 (780)
Q Consensus 593 lI~lD~DGTL~~~~~-~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L---~~~f~~ 648 (780)
-|++|+||||..... ....|-+.+++.|++|.+. |+.++|.|||+.... .+|+..
T Consensus 2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L~~~-G~~IIi~TaR~~~~~~~t~~wL~~ 60 (122)
T d2obba1 2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQE-KHRLILWSVREGELLDEAIEWCRA 60 (122)
T ss_dssp EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHT-TCEEEECCSCCHHHHHHHHHHHHT
T ss_pred EEEEEcCCCcCCCCCCccccccHHHHHHHHHHHHC-CCeEEEEecCCCcchHHHHHHHHH
Confidence 489999999987442 2346778999999999995 999999999987653 456654
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.62 E-value=0.0001 Score=69.82 Aligned_cols=55 Identities=20% Similarity=0.305 Sum_probs=38.5
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCCCceEEecCcc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~~lgliaenG~ 660 (780)
-|||+||+||||++ . +++++++..|+.++++|||+.-...+++.. .+.++.++|.
T Consensus 2 mkli~fDlDGTLl~---e----------~~~~~a~~~Gi~~~~~tgR~~~~~~~~~~~--~v~ll~~~~~ 56 (206)
T d1rkua_ 2 MEIACLDLEGVLVP---E----------IWIAFAEKTGIDALKATTRDIPDYDVLMKQ--RLRILDEHGL 56 (206)
T ss_dssp CEEEEEESBTTTBC---C----------HHHHHHHHHTCGGGGCCTTTCCCHHHHHHH--HHHHHHHTTC
T ss_pred cEEEEEcCccchHH---H----------HHHHHHHHcCCHHHHHHCCCCCCHHHHHHH--HHHHHHhCCC
Confidence 47999999999997 1 244555446999999999998777776653 2333344443
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=96.50 E-value=0.00047 Score=68.41 Aligned_cols=51 Identities=16% Similarity=0.268 Sum_probs=39.4
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcC---CChhhHHHHh
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG---RGRSSLSEWL 646 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~f 646 (780)
-++|+||+||||++ ....+ +.+.++|++|++. |.+++++|+ |+...+.+.+
T Consensus 2 yk~v~fDlDGTL~~---~~~~i-~~a~~~i~~l~~~-g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 2 YQGYLIDLDGTIYL---GKEPI-PAGKRFVERLQEK-DLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CCEEEECCBTTTEE---TTEEC-HHHHHHHHHHHHT-TCCEEEEECCCSSCHHHHHHHH
T ss_pred CCEEEEcCCCccEe---CCCcC-ccHHHHHHHHHHC-CCCEEEEeCCCCCCHHHHHHHH
Confidence 47899999999998 33344 7789999999995 999999975 5555555544
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.35 E-value=0.0016 Score=60.16 Aligned_cols=52 Identities=25% Similarity=0.048 Sum_probs=39.1
Q ss_pred CceEEeCCCCCCCCCCCC---------------------CCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHH
Q 003999 591 RRAIFLDYDGTVVPETSI---------------------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS 643 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~---------------------~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~ 643 (780)
.|+|+||+||||.+.... .-.+-+.+.++|+.|.+. |+.++|+|+.+...+.
T Consensus 5 pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~~-G~~~~v~S~~~~~~~~ 77 (164)
T d1u7pa_ 5 PKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSL-GVPVAAASRTSEIQGA 77 (164)
T ss_dssp CSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHHT-TCCEEEEECCSCHHHH
T ss_pred CCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHHC-CCcEEEEeccccchhh
Confidence 489999999999863210 013447899999999995 9999999987765443
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=96.27 E-value=0.00085 Score=66.46 Aligned_cols=55 Identities=13% Similarity=0.240 Sum_probs=42.9
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc---CCChhhHHHHhccC
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAPC 649 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~f~~l 649 (780)
+.|+|+||+||||++ ....+ +.+.++|+.|.+. |.+|+++| +|++..+.+.+..+
T Consensus 2 ~ik~VifDlDGTL~~---~~~~i-~~a~e~i~~l~~~-g~~~~~~TN~~~~~~~~~~~~l~~~ 59 (250)
T d2c4na1 2 TIKNVICDIDGVLMH---DNVAV-PGAAEFLHGIMDK-GLPLVLLTNYPSQTGQDLANRFATA 59 (250)
T ss_dssp CCCEEEEECBTTTEE---TTEEC-TTHHHHHHHHHHT-TCCEEEEESCCSCCHHHHHHHHHHT
T ss_pred CCCEEEEECCCeeEE---CCCcC-ccHHHHHHHHHHC-CCcEEEEeCCCCCCHHHHHHHHhhc
Confidence 368999999999997 33334 3678899999985 99999986 78888887776543
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=96.14 E-value=0.0013 Score=65.37 Aligned_cols=54 Identities=22% Similarity=0.225 Sum_probs=41.1
Q ss_pred cCceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEc---CCChhhHHHHhcc
Q 003999 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAP 648 (780)
Q Consensus 590 ~~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvS---GR~~~~L~~~f~~ 648 (780)
+.++|+||+||||++ ....+ +.+.++|++|.+. |.+++++| +|+...+.+.+..
T Consensus 6 ~ik~vlFDlDGTL~~---~~~~i-~~a~e~l~~l~~~-g~~~~~~TN~~~~~~~~~~~~~~~ 62 (261)
T d1vjra_ 6 KIELFILDMDGTFYL---DDSLL-PGSLEFLETLKEK-NKRFVFFTNNSSLGAQDYVRKLRN 62 (261)
T ss_dssp GCCEEEECCBTTTEE---TTEEC-TTHHHHHHHHHHT-TCEEEEEESCTTSCHHHHHHHHHH
T ss_pred hCCEEEEeCCCeeEE---CCccC-chHHHHHHHHHHc-CCCEEEEeCCCCCCHHHHHHHHHh
Confidence 578999999999998 33333 5677899999984 99999997 5666666665544
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=95.70 E-value=0.0035 Score=57.90 Aligned_cols=47 Identities=23% Similarity=0.399 Sum_probs=36.8
Q ss_pred CceEEeCCCCCCCCCCCCC--------CCCCHHHHHHHHHhccCCCCEEEEEcCCC
Q 003999 591 RRAIFLDYDGTVVPETSII--------KSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~--------~~ps~~~~~~L~~L~~d~g~~V~IvSGR~ 638 (780)
+|+||||.||||....... -.+-+.+.++|+.|.+. |.+++|+|..+
T Consensus 2 ~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~-g~~l~i~TNq~ 56 (161)
T d2fpwa1 2 QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKA-GYKLVMITNQD 56 (161)
T ss_dssp CEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHT-TEEEEEEEECT
T ss_pred CcEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHHHHc-CCceeeecccc
Confidence 6899999999998753211 23457899999999995 99999999754
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=95.48 E-value=0.0028 Score=60.95 Aligned_cols=37 Identities=8% Similarity=0.020 Sum_probs=32.2
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.+.|+.|.+. |..++|+||.....++.++..+
T Consensus 76 l~pg~~~~l~~L~~~-g~~~~ivS~~~~~~i~~~l~~l 112 (226)
T d2feaa1 76 IREGFREFVAFINEH-EIPFYVISGGMDFFVYPLLEGI 112 (226)
T ss_dssp BCTTHHHHHHHHHHH-TCCEEEEEEEEHHHHHHHHTTT
T ss_pred hhHHHHHHHHHHHhc-ccccccCCcchhhhHHHHHHHc
Confidence 456788999999885 9999999999999999998765
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=95.47 E-value=1.7 Score=44.50 Aligned_cols=249 Identities=15% Similarity=0.135 Sum_probs=146.8
Q ss_pred HHHHHHHHHHHHcCCCCCEEEEeCCccchHHHHHHHhcCCCcEEEEEeCCCCChhHhhcCCChHHHHHhhh--cCCEEEe
Q 003999 183 ANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIGF 260 (780)
Q Consensus 183 vN~~fA~~v~~~~~~~~DiVwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~~~~lp~r~eil~~ll--~~Dligf 260 (780)
+-..+++ +.+..+| |+|.||.=-.-.++..+-....++||++. |-=..+.++. -|..++..|-.. .||+.--
T Consensus 76 ~~~~~~~-~l~~~kP--D~vlv~GDr~e~la~a~aa~~~~ipi~Hi-egG~rsg~~~--~~~~de~~R~~iskls~~hf~ 149 (373)
T d1v4va_ 76 ILPQAAR-ALKEMGA--DYVLVHGDTLTTFAVAWAAFLEGIPVGHV-EAGLRSGNLK--EPFPEEANRRLTDVLTDLDFA 149 (373)
T ss_dssp HHHHHHH-HHHHTTC--SEEEEESSCHHHHHHHHHHHHTTCCEEEE-TCCCCCSCTT--SSTTHHHHHHHHHHHCSEEEE
T ss_pred HHHHHhh-hhhhcCc--ccccccccCccchhHHHHHHHhhhhheee-cccccccccc--cCcchhhhhhhhccccceeee
Confidence 3334433 4456677 89999987777777777667778999853 2212222222 244566666543 3777777
Q ss_pred ecHHHHHHHHHHHHhhhCceeccCCceeEEEEcCeEEEEEEeecCCCchhhhhhcCCchhHHHHHHHHHH---c-CCCeE
Q 003999 261 HTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQ---F-DGKKL 336 (780)
Q Consensus 261 ~t~~y~~~Fl~~~~r~l~~~~~~~~g~~~~~~~gr~~~i~i~P~GId~~~~~~~~~~~~~~~~~~~lr~~---~-~~~~v 336 (780)
-|..+.++.++ +|.+. ++ +..-| -+++|- +.. ...+.+. . .++.+
T Consensus 150 ~t~~~~~~L~~-----~Ge~~--~~----I~~vG--------~p~~D~--i~~----------~~~~~~~~~~~~~~~~~ 198 (373)
T d1v4va_ 150 PTPLAKANLLK-----EGKRE--EG----ILVTG--------QTGVDA--VLL----------AAKLGRLPEGLPEGPYV 198 (373)
T ss_dssp SSHHHHHHHHT-----TTCCG--GG----EEECC--------CHHHHH--HHH----------HHHHCCCCTTCCSSCEE
T ss_pred cchhhhhhhhh-----hcccc--cc----eeecc--------cchhhH--HHh----------hhhhcccccccccccce
Confidence 78877777764 34321 11 11111 112221 110 0111110 1 35677
Q ss_pred EEEeccccccCChHHHHHHHHHHHHhCCCCCCceEEEEEEcCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEec
Q 003999 337 ILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLID 416 (780)
Q Consensus 337 il~Vdrld~~KGi~~~l~A~~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~l~~ei~~lv~~In~~~g~~~~~pV~~~~ 416 (780)
++..-|....+.....+.++..+.+..++.. ++... +. . .. .+..+.+ .+ .. ...+.++
T Consensus 199 lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~----~i~p~-~~--~-~~---~~~~~~~---~~-~~-----~~n~~~~- 257 (373)
T d1v4va_ 199 TVTMHRRENWPLLSDLAQALKRVAEAFPHLT----FVYPV-HL--N-PV---VREAVFP---VL-KG-----VRNFVLL- 257 (373)
T ss_dssp EECCCCGGGGGGHHHHHHHHHHHHHHCTTSE----EEEEC-CS--C-HH---HHHHHHH---HH-TT-----CTTEEEE-
T ss_pred eEEeccccccchHHHHHHHHHHHhhhcccce----eeeee-cc--c-cc---chhhhhh---hh-cc-----cccceee-
Confidence 8888998888888999999999988887754 43322 22 1 11 1111111 11 11 1246655
Q ss_pred CCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCcccc-C-CCcEEE
Q 003999 417 RPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS-L-SGAIRV 494 (780)
Q Consensus 417 ~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~-l-~~al~V 494 (780)
.+++..+...+++.|++++=.| +-...||.+.+. |+|.=...|-.+. + .|...+
T Consensus 258 ~~l~~~~~l~ll~~s~~vignS-----ssgi~Ea~~lg~-------------------P~Inir~~~eRqeg~~~g~nvl 313 (373)
T d1v4va_ 258 DPLEYGSMAALMRASLLLVTDS-----GGLQEEGAALGV-------------------PVVVLRNVTERPEGLKAGILKL 313 (373)
T ss_dssp CCCCHHHHHHHHHTEEEEEESC-----HHHHHHHHHTTC-------------------CEEECSSSCSCHHHHHHTSEEE
T ss_pred ccchHHHHHHHhhhceeEeccc-----chhhhcchhhcC-------------------cEEEeCCCccCHHHHhcCeeEE
Confidence 4899999999999999988766 345669999864 5555444443332 3 244444
Q ss_pred CCCCHHHHHHHHHHHHcCC
Q 003999 495 NPWDIDAVADAMTLAINMR 513 (780)
Q Consensus 495 nP~d~~~~A~ai~~aL~m~ 513 (780)
-+.|.+++..++.++|..+
T Consensus 314 v~~d~~~I~~~i~~~l~~~ 332 (373)
T d1v4va_ 314 AGTDPEGVYRVVKGLLENP 332 (373)
T ss_dssp CCSCHHHHHHHHHHHHTCH
T ss_pred cCCCHHHHHHHHHHHHcCH
Confidence 5569999999999999854
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=94.81 E-value=0.0092 Score=55.83 Aligned_cols=48 Identities=25% Similarity=0.262 Sum_probs=37.8
Q ss_pred CceEEeCCCCCCCCCCCC-----CCCCCHHHHHHHHHhccCCCCEEEEEcCCCh
Q 003999 591 RRAIFLDYDGTVVPETSI-----IKSPGPEVISVLKTLCSDPNNTVFIVSGRGR 639 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~-----~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~ 639 (780)
.++||||.||||...... +-.+-+.+.++|+.|.+. |..++|+|..+.
T Consensus 2 ~~Av~~DrDGtl~~~~~y~~~~~~~~~~~gv~e~l~~L~~~-g~~~~ivTNq~~ 54 (182)
T d2gmwa1 2 VPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKM-GFALVVVTNQSG 54 (182)
T ss_dssp BCEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECTH
T ss_pred CCEEEEeCCCCccCCCCCCCCHHHeeECCCHHHHHHHHhhc-Cchhhhhhccch
Confidence 479999999999753322 224557899999999995 999999999863
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=94.61 E-value=0.0074 Score=59.43 Aligned_cols=52 Identities=23% Similarity=0.263 Sum_probs=40.2
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcC---CChhhHHHHhc
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG---RGRSSLSEWLA 647 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSG---R~~~~L~~~f~ 647 (780)
.|.|+||+||||++ ... +-+.+.++|+.|.+. |..++++|+ |+.+.+.+.+.
T Consensus 2 yk~vlFDlDGTL~~---~~~-~i~~a~e~l~~l~~~-g~~~~~~TN~s~~~~~~~~~~l~ 56 (253)
T d1wvia_ 2 YKGYLIDLDGTIYK---GKD-RIPAGEDFVKRLQER-QLPYILVTNNTTRTPEMVQEMLA 56 (253)
T ss_dssp CCEEEEECBTTTEE---TTE-ECHHHHHHHHHHHHH-TCCEEEEECCCSSCHHHHHHHHH
T ss_pred cCEEEEcCcCceEE---CCC-cCccHHHHHHHHHHC-CCCEEEEeCCCCCCHHHHHHHHH
Confidence 47899999999997 222 447789999999884 899999975 56666666654
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=94.48 E-value=0.011 Score=56.61 Aligned_cols=36 Identities=19% Similarity=0.099 Sum_probs=29.6
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|++.+++.++|+||.+...+...+...
T Consensus 94 ~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~ 129 (228)
T d2hcfa1 94 EGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLP 129 (228)
T ss_dssp TTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTT
T ss_pred CchHHHHhhhhccccccccccCCCcchhhhhhhhhh
Confidence 457788999998644789999999999998888754
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.05 E-value=0.0065 Score=58.57 Aligned_cols=37 Identities=24% Similarity=0.294 Sum_probs=31.8
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.++|+.|++. |.+++||||-....++.++..+
T Consensus 83 l~pg~~~~i~~lk~~-G~~~~ivS~~~~~~v~~i~~~l 119 (217)
T d1nnla_ 83 LTPGIRELVSRLQER-NVQVFLISGGFRSIVEHVASKL 119 (217)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHhC-CCEEEEECCCchHHHHHHHHHh
Confidence 347888999999995 9999999999999888887765
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=93.95 E-value=0.0085 Score=57.68 Aligned_cols=48 Identities=25% Similarity=0.362 Sum_probs=37.1
Q ss_pred ccCceEEeCCCCCCCCCCCC-----CCCCCHHHHHHHHHhccCCCCEEEEEcCC
Q 003999 589 TERRAIFLDYDGTVVPETSI-----IKSPGPEVISVLKTLCSDPNNTVFIVSGR 637 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~~~-----~~~ps~~~~~~L~~L~~d~g~~V~IvSGR 637 (780)
.+..+||||.||||...... +-.+-+.+.++|++|++. |..++|+|-.
T Consensus 21 ~~~~Aif~DrDGtl~~~~~y~~~~~~~~l~pgv~e~L~~L~~~-G~~l~IvTNQ 73 (209)
T d2o2xa1 21 PHLPALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRA-GIPVVVVTNQ 73 (209)
T ss_dssp SSCCCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHH-TCCEEEEEEC
T ss_pred CCCCEEEEeCCCCeECCCCCCCCHHHeEecccHHHHHHHHHhh-CCeEEEeccc
Confidence 34579999999999763322 224557899999999995 9999999954
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=93.76 E-value=0.012 Score=55.71 Aligned_cols=35 Identities=17% Similarity=0.286 Sum_probs=30.3
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.|+.|++. |++++|+||.+...+...+..+
T Consensus 98 ~~~~~~L~~L~~~-g~~~~i~tn~~~~~~~~~l~~~ 132 (224)
T d2hsza1 98 PNVKETLEALKAQ-GYILAVVTNKPTKHVQPILTAF 132 (224)
T ss_dssp TTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcc-CCcccccccccHHHHHHHHHhc
Confidence 5678899999985 9999999999999988887754
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.69 E-value=0.016 Score=55.08 Aligned_cols=49 Identities=22% Similarity=0.308 Sum_probs=36.9
Q ss_pred hccCceEEeCCCCCCCCCCCC--------CCC-CCHHHHHHHHHhccCCCCEEEEEcCC
Q 003999 588 KTERRAIFLDYDGTVVPETSI--------IKS-PGPEVISVLKTLCSDPNNTVFIVSGR 637 (780)
Q Consensus 588 ~a~~rlI~lD~DGTL~~~~~~--------~~~-ps~~~~~~L~~L~~d~g~~V~IvSGR 637 (780)
+.+.|+++||.||||....+. +.. ..+.+.++|+.|.++ |..++|+|--
T Consensus 18 ~~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L~~~-gy~iiIvTNQ 75 (195)
T d1yj5a1 18 KPQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAE-GYKLVIFTNQ 75 (195)
T ss_dssp CCCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHHHHH-TCEEEEEEEC
T ss_pred CCcCcEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHHHHHHHhC-CcEEEEecCc
Confidence 446789999999999753211 111 358899999999995 9999999974
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=93.22 E-value=0.015 Score=55.63 Aligned_cols=63 Identities=19% Similarity=0.290 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHhccCceEEeCCCCCCCCCCCC-------------------------------CCCCCHHHHHHHHHhcc
Q 003999 577 LSIDHIVSAYRKTERRAIFLDYDGTVVPETSI-------------------------------IKSPGPEVISVLKTLCS 625 (780)
Q Consensus 577 l~~~~i~~~y~~a~~rlI~lD~DGTL~~~~~~-------------------------------~~~ps~~~~~~L~~L~~ 625 (780)
.++.+|.+.++..+..+|+||+|-|++...+. ...|-+.+++.|+.+.+
T Consensus 21 ~~~~~i~~~~~g~~P~AIifDIDETvLdnspy~~~~~~~~~~~~~~y~~~~~~W~~~~~~~~~~A~p~pga~~fl~~~~~ 100 (209)
T d2b82a1 21 VSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVR 100 (209)
T ss_dssp ECHHHHHHHTTTCCCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHH
T ss_pred EEHHHHHHhcCCCCCceEEEcchhhhhcCcHHHHhhhhhcCcCcccccCCCcchHHHhcccccccCcchhHHHHHHHHHH
Confidence 47788999988777789999999999985321 02344689999999999
Q ss_pred CCCCEEEEEcCCChh
Q 003999 626 DPNNTVFIVSGRGRS 640 (780)
Q Consensus 626 d~g~~V~IvSGR~~~ 640 (780)
. |++||.+|||+..
T Consensus 101 ~-Gv~IfyVTnR~~~ 114 (209)
T d2b82a1 101 R-GDAIFFVTGRSPT 114 (209)
T ss_dssp H-TCEEEEEECSCCC
T ss_pred c-CCeEEEEeCCchh
Confidence 4 9999999999864
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=93.17 E-value=0.027 Score=53.22 Aligned_cols=35 Identities=17% Similarity=0.036 Sum_probs=30.3
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.++|+.|++. |.+++|+||.+...+...+..+
T Consensus 91 pg~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~l~~~ 125 (218)
T d1te2a_ 91 PGVREAVALCKEQ-GLLVGLASASPLHMLEKVLTMF 125 (218)
T ss_dssp TTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHT
T ss_pred chHHHHHHHhhhc-cccccccccccccccccccccc
Confidence 5678999999984 9999999999999988888654
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.15 E-value=0.028 Score=52.19 Aligned_cols=37 Identities=19% Similarity=0.152 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.+.++.+..+ +..++++||.....+.......
T Consensus 76 ~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~ 112 (210)
T d1j97a_ 76 PTEGAEETIKELKNR-GYVVAVVSGGFDIAVNKIKEKL 112 (210)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHc-CCEEEeecccccccccchhhcc
Confidence 345678888999985 8999999999888777766553
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=92.86 E-value=0.025 Score=53.11 Aligned_cols=35 Identities=23% Similarity=0.268 Sum_probs=29.6
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
-+.+.++|+.|++ +.+++|+|+.....+...+..+
T Consensus 84 ~~g~~~~L~~l~~--~~~~~ivT~~~~~~~~~~l~~~ 118 (207)
T d2hdoa1 84 YPGITSLFEQLPS--ELRLGIVTSQRRNELESGMRSY 118 (207)
T ss_dssp CTTHHHHHHHSCT--TSEEEEECSSCHHHHHHHHTTS
T ss_pred ccchhhhhhhhcc--cccccccccccccccccccccc
Confidence 3568899999964 6899999999999999988765
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=92.57 E-value=0.055 Score=52.47 Aligned_cols=33 Identities=15% Similarity=0.084 Sum_probs=26.5
Q ss_pred HHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 615 EVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 615 ~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
.+.++|+.|++. |.+++|+||.+...+...+..
T Consensus 103 g~~~~L~~Lk~~-g~~i~i~Tn~~~~~~~~~l~~ 135 (257)
T d1swva_ 103 GVKEVIASLRER-GIKIGSTTGYTREMMDIVAKE 135 (257)
T ss_dssp THHHHHHHHHHT-TCEEEEBCSSCHHHHHHHHHH
T ss_pred cHHHHHHHHHhc-ccceeecCCCchhhHHHHHHH
Confidence 455678888885 899999999998888776654
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=91.33 E-value=0.052 Score=50.51 Aligned_cols=61 Identities=21% Similarity=0.172 Sum_probs=44.3
Q ss_pred ccCceEEeCCCCCCCCCC---CCC----CCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccCC
Q 003999 589 TERRAIFLDYDGTVVPET---SII----KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE 650 (780)
Q Consensus 589 a~~rlI~lD~DGTL~~~~---~~~----~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l~ 650 (780)
.+.|+|++|+||+|++.. +.+ +..+..--..++.|.+ .++.++++||+...........+.
T Consensus 3 ~~ik~~i~DvDGVlTDG~v~~~~dG~e~k~F~~~Dg~gi~~l~~-~gi~~~iis~~~~~~v~~~~~~l~ 70 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMD-ADIQVAVLSGRDSPILRRRIADLG 70 (177)
T ss_dssp GGCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHH-TTCEEEEEESCCCHHHHHHHHHHT
T ss_pred ccCeEEEEccCCcccCCeEEEeCCCCEEEEEECcchHHHHHHhh-hcEEEEEecCCchhHHHHHHhhhc
Confidence 467999999999999732 111 1223333446777887 499999999999999988887653
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=91.29 E-value=0.089 Score=48.49 Aligned_cols=34 Identities=26% Similarity=0.372 Sum_probs=27.2
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.|++|++. |.+++|+|+.+...+ +.+..+
T Consensus 82 ~gv~~~l~~l~~~-g~~~~i~Sn~~~~~~-~~l~~~ 115 (187)
T d2fi1a1 82 EGVSDLLEDISNQ-GGRHFLVSHRNDQVL-EILEKT 115 (187)
T ss_dssp TTHHHHHHHHHHT-TCEEEEECSSCTHHH-HHHHHT
T ss_pred chhHHHHHHHHhh-hccccccccCccchh-hhhhhh
Confidence 5788999999995 999999999877655 456554
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=91.10 E-value=0.13 Score=48.55 Aligned_cols=35 Identities=11% Similarity=0.184 Sum_probs=28.8
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
+.+.+.|++|++. |++++|+|+.+.......+..+
T Consensus 130 pg~~e~l~~L~~~-g~~l~i~Tn~~~~~~~~~~~~~ 164 (253)
T d1zs9a1 130 ADVVPAVRKWREA-GMKVYIYSSGSVEAQKLLFGHS 164 (253)
T ss_dssp TTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHTB
T ss_pred CCHHHHHHHHhhc-cCceeecCCCcHHHHHHHHHHc
Confidence 4467888999884 9999999999999888777654
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=90.33 E-value=0.056 Score=50.41 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=25.8
Q ss_pred HHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhcc
Q 003999 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (780)
Q Consensus 614 ~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~ 648 (780)
+.+.++|+.|++. |.+++|+|++.... ...+..
T Consensus 85 pgv~~~L~~L~~~-g~~~~v~Sn~~~~~-~~~l~~ 117 (204)
T d2go7a1 85 PGAREVLAWADES-GIQQFIYTHKGNNA-FTILKD 117 (204)
T ss_dssp TTHHHHHHHHHHT-TCEEEEECSSCTHH-HHHHHH
T ss_pred chHHhhhhccccc-ccchhhhcccchhh-hhhhhh
Confidence 6788999999985 99999999987654 445544
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=87.72 E-value=0.51 Score=47.49 Aligned_cols=96 Identities=11% Similarity=0.043 Sum_probs=61.2
Q ss_pred ecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCCc--------cc
Q 003999 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC--------SP 486 (780)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--------~~ 486 (780)
+.+.+++.+ ++..||++|..+ |.| +..|+++||. |+|+.-+.+. +.
T Consensus 274 i~~~~p~~~---ll~~a~~~v~hg---G~~-t~~Eal~~G~-------------------P~v~~P~~~d~~~eQ~~nA~ 327 (391)
T d1pn3a_ 274 VVGEVNLQE---LFGRVAAAIHHD---SAG-TTLLAMRAGI-------------------PQIVVRRVVDNVVEQAYHAD 327 (391)
T ss_dssp EESSCCHHH---HHTTSSCEEEES---CHH-HHHHHHHHTC-------------------CEEEECSSCCBTTBCCHHHH
T ss_pred EecccCHHH---HHhhccEEEecC---chH-HHHHHHHhCC-------------------cEEEeccccCCcchHHHHHH
Confidence 445777654 567899998664 554 6789999974 5565544442 22
Q ss_pred cC---CCcEEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHHHHHH
Q 003999 487 SL---SGAIRVNPWD--IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539 (780)
Q Consensus 487 ~l---~~al~VnP~d--~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~Wa~~ 539 (780)
.+ +.|+.+++.+ .++++++|.++|+.. -++|.+++.+.++...+..=++.
T Consensus 328 ~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~---~r~~a~~~a~~~~~~g~~~aa~~ 382 (391)
T d1pn3a_ 328 RVAELGVGVAVDGPVPTIDSLSAALDTALAPE---IRARATTVADTIRADGTTVAAQL 382 (391)
T ss_dssp HHHHHTSEEEECCSSCCHHHHHHHHHHHTSTT---HHHHHHHHGGGSCSCHHHHHHHH
T ss_pred HHHHCCCEEEcCcCCCCHHHHHHHHHHHhCHH---HHHHHHHHHHHHHhcCHHHHHHH
Confidence 23 2377887754 899999999999643 34455566666655444443433
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.12 E-value=0.17 Score=47.13 Aligned_cols=28 Identities=29% Similarity=0.449 Sum_probs=21.6
Q ss_pred CCHHHHHHHHHhccCCCCEEEEEcCCCh
Q 003999 612 PGPEVISVLKTLCSDPNNTVFIVSGRGR 639 (780)
Q Consensus 612 ps~~~~~~L~~L~~d~g~~V~IvSGR~~ 639 (780)
|-+.++++|++|.+..+..|+|+|.|..
T Consensus 75 p~~gA~e~l~~L~~~~~~~v~i~t~~~~ 102 (195)
T d1q92a_ 75 PLPGAVEAVKEMASLQNTDVFICTSPIK 102 (195)
T ss_dssp BCTTHHHHHHHHHHSTTEEEEEEECCCS
T ss_pred cccCHHHHHHHHhhccCccceEEccccc
Confidence 4477889999998854457889999864
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=85.19 E-value=0.58 Score=41.02 Aligned_cols=56 Identities=14% Similarity=0.087 Sum_probs=45.9
Q ss_pred CceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 591 ~rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
-..+++|.+||++-. ...++.+++.++++.|++. |+.|+++||.........-..+
T Consensus 3 ~~~~~~d~~~~~~~g--~~D~lr~~a~~~I~~L~~~-Gi~v~ilTGD~~~~a~~ia~~l 58 (135)
T d2b8ea1 3 VTAVIFDKTGTLTKG--KPDTLKESAKPAVQELKRM-GIKVGMITGDNWRSAEAISREL 58 (135)
T ss_dssp CCEEEEECCCCCBCS--CCCCBCTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHH
T ss_pred EEEEEECCceEEEEe--cCCCCCccHHHHHHHHHHc-CCEEEEEcCcchhhhhHHHhhh
Confidence 357999999999752 3345678899999999985 9999999999999988877655
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=82.74 E-value=1.3 Score=44.15 Aligned_cols=94 Identities=11% Similarity=0.035 Sum_probs=58.9
Q ss_pred EEEecCCCCHHHHHHHHHhcceeeeccCCcCCCcchhhhhhcccCCCccccccccCCCCCCCceEEEcCCCC----cccc
Q 003999 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG----CSPS 487 (780)
Q Consensus 412 V~~~~~~v~~~el~aly~~ADv~vvtS~rEGmnLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G----~~~~ 487 (780)
|+ +.+.+++. ++|..+|++|. -|-..+..|++++|. |+|+--+.+ .+..
T Consensus 287 v~-~~~~~p~~---~~l~~~~~~V~----hgG~~t~~Eal~~Gv-------------------P~v~~P~~~DQ~~na~~ 339 (401)
T d1iira_ 287 CF-AIGEVNHQ---VLFGRVAAVIH----HGGAGTTHVAARAGA-------------------PQILLPQMADQPYYAGR 339 (401)
T ss_dssp EE-ECSSCCHH---HHGGGSSEEEE----CCCHHHHHHHHHHTC-------------------CEEECCCSTTHHHHHHH
T ss_pred EE-EEeccCHH---HHHhhcCEEEe----cCCchHHHHHHHhCC-------------------CEEEccccccHHHHHHH
Confidence 54 44567755 45778999883 455667779999975 455533333 2222
Q ss_pred C---CCcEEECCC--CHHHHHHHHHHHHcCCHHHHHHHHHHHhhHhhhCCHHH
Q 003999 488 L---SGAIRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAY 535 (780)
Q Consensus 488 l---~~al~VnP~--d~~~~A~ai~~aL~m~~~er~~r~~~~~~~V~~~~~~~ 535 (780)
+ +.|+.+++. +.+++++||.++|+ + +-++|.+++.+.+++-....
T Consensus 340 l~~~G~g~~l~~~~~~~~~l~~ai~~~l~--~-~~~~~a~~~~~~~~~~~~~~ 389 (401)
T d1iira_ 340 VAELGVGVAHDGPIPTFDSLSAALATALT--P-ETHARATAVAGTIRTDGAAV 389 (401)
T ss_dssp HHHHTSEEECSSSSCCHHHHHHHHHHHTS--H-HHHHHHHHHHHHSCSCHHHH
T ss_pred HHHCCCEEEcCcCCCCHHHHHHHHHHHhC--H-HHHHHHHHHHHHHHhcChHH
Confidence 3 347888775 68999999999995 2 33445555555555433333
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=81.97 E-value=0.75 Score=41.79 Aligned_cols=55 Identities=16% Similarity=0.274 Sum_probs=45.3
Q ss_pred ceEEeCCCCCCCCCCCCCCCCCHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 592 rlI~lD~DGTL~~~~~~~~~ps~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
-++++|.+|||+-.. . .+|-+++.++++.|++. |++|+++||-........-..+
T Consensus 3 ~~~~~d~~~~~~~~~-~-Dp~R~~~~~~I~~l~~~-GI~v~miTGD~~~tA~~ia~~~ 57 (168)
T d1wpga2 3 SVICSDKTGTLTTNQ-L-DPPRKEVMGSIQLCRDA-GIRVIMITGDNKGTAIAICRRI 57 (168)
T ss_dssp CEEEECCTTTTBCCC-E-CCBCTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHT
T ss_pred EEEEECCccEEEEEe-c-CCCchhHHHHHHHHHHC-cCEEEEECCCCHHHHHHHHHHc
Confidence 368889999998633 2 35668899999999995 9999999999999988877654
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=81.61 E-value=0.54 Score=46.84 Aligned_cols=36 Identities=19% Similarity=0.128 Sum_probs=28.2
Q ss_pred CHHHHHHHHHhccCCCCEEEEEcCCChhhHHHHhccC
Q 003999 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (780)
Q Consensus 613 s~~~~~~L~~L~~d~g~~V~IvSGR~~~~L~~~f~~l 649 (780)
.+.+.+.++.|.+. ++.|+|+||-=...++..+..+
T Consensus 137 r~G~~e~~~~l~~~-~i~~~IvSgG~~~~ie~vl~~l 172 (291)
T d2bdua1 137 KEGYENFFGKLQQH-GIPVFIFSAGIGDVLEEVIRQA 172 (291)
T ss_dssp CBTHHHHHHHHHHH-TCCEEEEEEEEHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHc-CCeEEEEcCChHHHHHHHHHHc
Confidence 34566777777774 8999999998888888888765
|